Upload BertForMaskedLM

config.json

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+{
+  "_name_or_path": "single_bp_2k_step19999",
+  "architectures": [
+    "BertForMaskedLM"
+  ],
+  "attention_probs_dropout_prob": 0.1,
+  "attn_norm_layer_type": "layer_norm",
+  "attn_num_groups": 1,
+  "auto_map": {
+    "AutoConfig": "configuring_nt_bert.BertConfig",
+    "AutoModelForMaskedLM": "modeling_nt_bert.BertForMaskedLM"
+  },
+  "classifier_dropout": "None",
+  "embedding_norm_layer_type": "layer_norm",
+  "embedding_num_groups": 1,
+  "embedding_size": 1280,
+  "hidden_act": "gelu",
+  "hidden_dropout_prob": 0.1,
+  "hidden_size": 1280,
+  "initializer_range": 0.02,
+  "intermediate_size": 5120,
+  "layer_norm_eps": 1e-12,
+  "max_position_embeddings": 2000,
+  "model_type": "bert",
+  "mup": true,
+  "num_attention_heads": 16,
+  "num_hidden_layers": 24,
+  "output_mult": 1,
+  "pad_token_id": 3,
+  "position_embedding_type": "alibi",
+  "prenorm": false,
+  "query_zero_init": false,
+  "readout_zero_init": false,
+  "summary_activation": "gelu",
+  "summary_last_dropout": 0.1,
+  "summary_type": "first",
+  "summary_use_proj": true,
+  "torch_dtype": "float32",
+  "transformers_version": "4.25.1",
+  "type_vocab_size": 2,
+  "vocab_size": 10
+}

configuring_nt_bert.py

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+from transformers.configuration_utils import PretrainedConfig
+
+
+class BertConfig(PretrainedConfig):
+    r"""
+    This is the configuration class to store the configuration of a :class:`~transformers.ElectraModel` or a
+    :class:`~transformers.TFElectraModel`. It is used to instantiate a ELECTRA model according to the specified
+    arguments, defining the model architecture. Instantiating a configuration with the defaults will yield a similar
+    configuration to that of the ELECTRA `google/electra-small-discriminator
+    <https://huggingface.co/google/electra-small-discriminator>`__ architecture.
+
+    Configuration objects inherit from :class:`~transformers.PretrainedConfig` and can be used to control the model
+    outputs. Read the documentation from :class:`~transformers.PretrainedConfig` for more information.
+
+
+    Args:
+        vocab_size (:obj:`int`, `optional`, defaults to 30522):
+            Vocabulary size of the ELECTRA model. Defines the number of different tokens that can be represented by the
+            :obj:`inputs_ids` passed when calling :class:`~transformers.ElectraModel` or
+            :class:`~transformers.TFElectraModel`.
+        embedding_size (:obj:`int`, `optional`, defaults to 128):
+            Dimensionality of the encoder layers and the pooler layer.
+        hidden_size (:obj:`int`, `optional`, defaults to 256):
+            Dimensionality of the encoder layers and the pooler layer.
+        num_hidden_layers (:obj:`int`, `optional`, defaults to 12):
+            Number of hidden layers in the Transformer encoder.
+        num_attention_heads (:obj:`int`, `optional`, defaults to 4):
+            Number of attention heads for each attention layer in the Transformer encoder.
+        intermediate_size (:obj:`int`, `optional`, defaults to 1024):
+            Dimensionality of the "intermediate" (i.e., feed-forward) layer in the Transformer encoder.
+        hidden_act (:obj:`str` or :obj:`Callable`, `optional`, defaults to :obj:`"gelu"`):
+            The non-linear activation function (function or string) in the encoder and pooler. If string,
+            :obj:`"gelu"`, :obj:`"relu"`, :obj:`"silu"` and :obj:`"gelu_new"` are supported.
+        hidden_dropout_prob (:obj:`float`, `optional`, defaults to 0.1):
+            The dropout probability for all fully connected layers in the embeddings, encoder, and pooler.
+        attention_probs_dropout_prob (:obj:`float`, `optional`, defaults to 0.1):
+            The dropout ratio for the attention probabilities.
+        max_position_embeddings (:obj:`int`, `optional`, defaults to 512):
+            The maximum sequence length that this model might ever be used with. Typically set this to something large
+            just in case (e.g., 512 or 1024 or 2048).
+        type_vocab_size (:obj:`int`, `optional`, defaults to 2):
+            The vocabulary size of the :obj:`token_type_ids` passed when calling :class:`~transformers.ElectraModel` or
+            :class:`~transformers.TFElectraModel`.
+        initializer_range (:obj:`float`, `optional`, defaults to 0.02):
+            The standard deviation of the truncated_normal_initializer for initializing all weight matrices.
+        layer_norm_eps (:obj:`float`, `optional`, defaults to 1e-12):
+            The epsilon used by the layer normalization layers.
+        summary_type (:obj:`str`, `optional`, defaults to :obj:`"first"`):
+            Argument used when doing sequence summary. Used in the sequence classification and multiple choice models.
+
+            Has to be one of the following options:
+
+                - :obj:`"last"`: Take the last token hidden state (like XLNet).
+                - :obj:`"first"`: Take the first token hidden state (like BERT).
+                - :obj:`"mean"`: Take the mean of all tokens hidden states.
+                - :obj:`"cls_index"`: Supply a Tensor of classification token position (like GPT/GPT-2).
+                - :obj:`"attn"`: Not implemented now, use multi-head attention.
+        summary_use_proj (:obj:`bool`, `optional`, defaults to :obj:`True`):
+            Argument used when doing sequence summary. Used in the sequence classification and multiple choice models.
+
+            Whether or not to add a projection after the vector extraction.
+        summary_activation (:obj:`str`, `optional`):
+            Argument used when doing sequence summary. Used in the sequence classification and multiple choice models.
+
+            Pass :obj:`"gelu"` for a gelu activation to the output, any other value will result in no activation.
+        summary_last_dropout (:obj:`float`, `optional`, defaults to 0.0):
+            Argument used when doing sequence summary. Used in the sequence classification and multiple choice models.
+
+            The dropout ratio to be used after the projection and activation.
+        position_embedding_type (:obj:`str`, `optional`, defaults to :obj:`"absolute"`):
+            Type of position embedding. Choose one of :obj:`"absolute"`, :obj:`"relative_key"`,
+            :obj:`"relative_key_query"`. For positional embeddings use :obj:`"absolute"`. For more information on
+            :obj:`"relative_key"`, please refer to `Self-Attention with Relative Position Representations (Shaw et al.)
+            <https://arxiv.org/abs/1803.02155>`__. For more information on :obj:`"relative_key_query"`, please refer to
+            `Method 4` in `Improve Transformer Models with Better Relative Position Embeddings (Huang et al.)
+            <https://arxiv.org/abs/2009.13658>`__.
+        classifier_dropout (:obj:`float`, `optional`):
+            The dropout ratio for the classification head.
+
+    Examples::
+
+        >>> from transformers import ElectraModel, ElectraConfig
+
+        >>> # Initializing a ELECTRA electra-base-uncased style configuration
+        >>> configuration = ElectraConfig()
+
+        >>> # Initializing a model from the electra-base-uncased style configuration
+        >>> model = ElectraModel(configuration)
+
+        >>> # Accessing the model configuration
+        >>> configuration = model.config
+    """
+    model_type = "bert"
+
+    def __init__(
+        self,
+        vocab_size=30522,
+        embedding_size=128,
+        hidden_size=256,
+        num_hidden_layers=12,
+        num_attention_heads=4,
+        intermediate_size=1024,
+        hidden_act="gelu",
+        hidden_dropout_prob=0.1,
+        attention_probs_dropout_prob=0.1,
+        max_position_embeddings=512,
+        type_vocab_size=2,
+        initializer_range=0.02,
+        layer_norm_eps=1e-12,
+        summary_type="first",
+        summary_use_proj=True,
+        summary_activation="gelu",
+        summary_last_dropout=0.1,
+        pad_token_id=0,
+        position_embedding_type="absolute",
+        classifier_dropout=None,
+        prenorm=False,
+        mup=False,
+        embedding_norm_layer_type="layer_norm",
+        embedding_num_groups=1,
+        attn_norm_layer_type="layer_norm",
+        attn_num_groups=1,
+        output_mult=1,
+        readout_zero_init=False,
+        query_zero_init=False,
+        **kwargs,
+    ):
+        super().__init__(pad_token_id=pad_token_id, **kwargs)
+
+        self.vocab_size = vocab_size
+        self.embedding_size = embedding_size
+        self.hidden_size = hidden_size
+        self.num_hidden_layers = num_hidden_layers
+        self.num_attention_heads = num_attention_heads
+        self.intermediate_size = intermediate_size
+        self.hidden_act = hidden_act
+        self.hidden_dropout_prob = hidden_dropout_prob
+        self.attention_probs_dropout_prob = attention_probs_dropout_prob
+        self.max_position_embeddings = max_position_embeddings
+        self.type_vocab_size = type_vocab_size
+        self.initializer_range = initializer_range
+        self.layer_norm_eps = layer_norm_eps
+        # passing in 1e-x in config turns to string
+        if isinstance(self.layer_norm_eps, str):
+            self.layer_norm_eps = float(self.layer_norm_eps)
+
+        self.summary_type = summary_type
+        self.summary_use_proj = summary_use_proj
+        self.summary_activation = summary_activation
+        self.summary_last_dropout = summary_last_dropout
+        self.position_embedding_type = position_embedding_type
+        self.classifier_dropout = classifier_dropout
+        # transformers without tears suggests using prenorm
+        self.prenorm = prenorm
+        self.mup = mup
+        self.embedding_norm_layer_type = embedding_norm_layer_type
+        self.embedding_num_groups = embedding_num_groups
+        self.attn_norm_layer_type = attn_norm_layer_type
+        self.attn_num_groups = attn_num_groups
+        self.output_mult = output_mult
+        self.readout_zero_init = readout_zero_init
+        self.query_zero_init = query_zero_init

modeling_nt_bert.py

@@ -0,0 +1,999 @@
+import os
+import math
+import torch
+import torch.nn as nn
+import torch.nn.functional as F
+from einops import rearrange
+from huggingface_hub import hf_hub_download
+from mup import MuReadout, set_base_shapes
+from mup.init import normal_
+from nt_transformer.models.nt_bert.configuring_nt_bert import BertConfig
+from rotary_embedding_torch import RotaryEmbedding
+from transformers.modeling_outputs import (
+    BaseModelOutputWithPastAndCrossAttentions,
+    MaskedLMOutput,
+)
+from transformers.modeling_utils import (
+    PreTrainedModel,
+    apply_chunking_to_forward,
+    find_pruneable_heads_and_indices,
+    get_activation,
+    prune_linear_layer,
+)
+
+
+class BertPreTrainedModel(PreTrainedModel):
+    """
+    An abstract class to handle weights initialization and a simple interface for downloading and loading pretrained
+    models.
+    """
+
+    config_class = BertConfig
+    base_model_prefix = "bert"
+    _keys_to_ignore_on_load_missing = [r"position_ids"]
+    _keys_to_ignore_on_load_unexpected = [
+        r"bert\.embeddings_project\.weight",
+        r"bert\.embeddings_project\.bias",
+    ]
+
+    # Copied from transformers.models.bert.modeling_bert.BertPreTrainedModel._init_weights
+    def _init_weights(self, module, readout_zero_init=False, query_zero_init=False):
+        """Initialize the weights"""
+        if isinstance(module, nn.Linear):
+            # Slightly different from the TF version which uses truncated_normal for initialization
+            # cf https://github.com/pytorch/pytorch/pull/5617
+            ### muP: swap constant std normal init with normal_ from `mup.init`.
+            ### Because `_init_weights` is called in `__init__`, before `infshape` is set,
+            ### we need to manually call `self.apply(self._init_weights)` after calling
+            ### `set_base_shape(model, base)`
+            if isinstance(module, MuReadout) and readout_zero_init:
+                module.weight.data.zero_()
+            else:
+                if hasattr(module.weight, "infshape"):
+                    normal_(module.weight, mean=0.0, std=self.config.initializer_range)
+                else:
+                    module.weight.data.normal_(
+                        mean=0.0, std=self.config.initializer_range
+                    )
+            ### End muP
+            if module.bias is not None:
+                module.bias.data.zero_()
+        elif isinstance(module, nn.Embedding):
+            module.weight.data.normal_(mean=0.0, std=self.config.initializer_range)
+            if module.padding_idx is not None:
+                module.weight.data[module.padding_idx].zero_()
+        elif isinstance(module, nn.LayerNorm):
+            module.bias.data.zero_()
+            module.weight.data.fill_(1.0)
+        ### muP
+        if isinstance(module, BertSelfAttention):
+            if query_zero_init:
+                module.query.weight.data[:] = 0
+
+    @classmethod
+    def from_pretrained(cls, pretrained_model_name_or_path, *model_args, **kwargs):
+        model = super().from_pretrained(
+            pretrained_model_name_or_path, *model_args, **kwargs
+        )
+
+        # since we used MuP, need to reset values since they're not saved with the model
+        if os.path.exists("base_shapes.bsh") is False:
+            hf_hub_download(
+                "zpn/human_bp_bert", "base_shapes.bsh"
+            )
+            
+        set_base_shapes(model, "base_shapes.bsh", rescale_params=False)
+
+        return model
+
+
+class BertEmbeddings(nn.Module):
+    """Construct the embeddings from word, position and token_type embeddings."""
+
+    def __init__(self, config):
+        super().__init__()
+        self.word_embeddings = nn.Embedding(
+            config.vocab_size, config.embedding_size, padding_idx=config.pad_token_id
+        )
+        self.position_embeddings = nn.Embedding(
+            config.max_position_embeddings, config.embedding_size
+        )
+        self.token_type_embeddings = nn.Embedding(
+            config.type_vocab_size, config.embedding_size
+        )
+
+        # self.LayerNorm is not snake-cased to stick with TensorFlow model variable name and be able to load
+        # any TensorFlow checkpoint file
+
+        if config.embedding_norm_layer_type == "layer_norm":
+            self.norm = nn.LayerNorm(config.embedding_size, eps=config.layer_norm_eps)
+        elif config.embedding_norm_layer_type == "group_norm":
+            self.norm = nn.GroupNorm(
+                num_groups=config.embedding_num_groups,
+                num_channels=config.embedding_size,
+            )
+        else:
+            raise ValueError(
+                f"Unknown attn_norm_layer_type {config.attn_norm_layer_type}"
+            )
+
+        self.dropout = nn.Dropout(config.hidden_dropout_prob)
+
+        # position_ids (1, len position emb) is contiguous in memory and exported when serialized
+        self.register_buffer(
+            "position_ids", torch.arange(config.max_position_embeddings).expand((1, -1))
+        )
+        self.position_embedding_type = getattr(
+            config, "position_embedding_type", "absolute"
+        )
+
+        self.register_buffer(
+            "token_type_ids",
+            torch.zeros(
+                self.position_ids.size(),
+                dtype=torch.long,
+                device=self.position_ids.device,
+            ),
+            persistent=False,
+        )
+
+    def forward(
+        self,
+        input_ids=None,
+        token_type_ids=None,
+        position_ids=None,
+        inputs_embeds=None,
+        past_key_values_length=0,
+    ):
+        if input_ids is not None:
+            input_shape = input_ids.size()
+        else:
+            input_shape = inputs_embeds.size()[:-1]
+
+        seq_length = input_shape[1]
+
+        if position_ids is None:
+            position_ids = self.position_ids[
+                :, past_key_values_length : seq_length + past_key_values_length
+            ]
+
+        # Setting the token_type_ids to the registered buffer in constructor where it is all zeros, which usually occurs
+        # when its auto-generated, registered buffer helps users when tracing the model without passing token_type_ids, solves
+        # issue #5664
+        if token_type_ids is None:
+            if hasattr(self, "token_type_ids"):
+                buffered_token_type_ids = self.token_type_ids[:, :seq_length]
+                buffered_token_type_ids_expanded = buffered_token_type_ids.expand(
+                    input_shape[0], seq_length
+                )
+                token_type_ids = buffered_token_type_ids_expanded
+            else:
+                token_type_ids = torch.zeros(
+                    input_shape, dtype=torch.long, device=self.position_ids.device
+                )
+
+        if inputs_embeds is None:
+            inputs_embeds = self.word_embeddings(input_ids)
+        token_type_embeddings = self.token_type_embeddings(token_type_ids)
+
+        embeddings = inputs_embeds + token_type_embeddings
+        if self.position_embedding_type == "absolute":
+            position_embeddings = self.position_embeddings(position_ids)
+            embeddings += position_embeddings
+
+        if isinstance(self.norm, nn.GroupNorm):
+            # group norm only works over channel dim
+            reshaped = embeddings.permute(0, 2, 1)
+            embeddings = self.norm(reshaped)
+            embeddings = embeddings.permute(0, 2, 1)
+        else:
+            embeddings = self.norm(embeddings)
+
+        embeddings = self.dropout(embeddings)
+        return embeddings
+
+
+class BertIntermediate(nn.Module):
+    def __init__(self, config):
+        super().__init__()
+        self.dense = nn.Linear(config.hidden_size, config.intermediate_size)
+        if isinstance(config.hidden_act, str):
+            self.intermediate_act_fn = get_activation(config.hidden_act)
+        else:
+            self.intermediate_act_fn = config.hidden_act
+
+    def forward(self, hidden_states):
+        hidden_states = self.dense(hidden_states)
+        hidden_states = self.intermediate_act_fn(hidden_states)
+        return hidden_states
+
+
+class BertLayer(nn.Module):
+    def __init__(self, config):
+        super().__init__()
+        self.chunk_size_feed_forward = config.chunk_size_feed_forward
+        self.seq_len_dim = 1
+        self.attention = BertAttention(config)
+        self.is_decoder = config.is_decoder
+        self.add_cross_attention = config.add_cross_attention
+        if self.add_cross_attention:
+            assert (
+                self.is_decoder
+            ), f"{self} should be used as a decoder model if cross attention is added"
+            self.crossattention = BertAttention(config)
+        self.intermediate = BertIntermediate(config)
+        self.output = BertOutput(config)
+
+    def forward(
+        self,
+        hidden_states,
+        attention_mask=None,
+        head_mask=None,
+        encoder_hidden_states=None,
+        encoder_attention_mask=None,
+        past_key_value=None,
+        output_attentions=False,
+    ):
+        # decoder uni-directional self-attention cached key/values tuple is at positions 1,2
+        self_attn_past_key_value = (
+            past_key_value[:2] if past_key_value is not None else None
+        )
+        self_attention_outputs = self.attention(
+            hidden_states,
+            attention_mask,
+            head_mask,
+            output_attentions=output_attentions,
+            past_key_value=self_attn_past_key_value,
+        )
+        attention_output = self_attention_outputs[0]
+
+        # if decoder, the last output is tuple of self-attn cache
+        if self.is_decoder:
+            outputs = self_attention_outputs[1:-1]
+            present_key_value = self_attention_outputs[-1]
+        else:
+            outputs = self_attention_outputs[
+                1:
+            ]  # add self attentions if we output attention weights
+
+        cross_attn_present_key_value = None
+        if self.is_decoder and encoder_hidden_states is not None:
+            assert hasattr(
+                self, "crossattention"
+            ), f"If `encoder_hidden_states` are passed, {self} has to be instantiated with cross-attention layers by setting `config.add_cross_attention=True`"
+
+            # cross_attn cached key/values tuple is at positions 3,4 of past_key_value tuple
+            cross_attn_past_key_value = (
+                past_key_value[-2:] if past_key_value is not None else None
+            )
+            cross_attention_outputs = self.crossattention(
+                attention_output,
+                attention_mask,
+                head_mask,
+                encoder_hidden_states,
+                encoder_attention_mask,
+                cross_attn_past_key_value,
+                output_attentions,
+            )
+            attention_output = cross_attention_outputs[0]
+            outputs = (
+                outputs + cross_attention_outputs[1:-1]
+            )  # add cross attentions if we output attention weights
+
+            # add cross-attn cache to positions 3,4 of present_key_value tuple
+            cross_attn_present_key_value = cross_attention_outputs[-1]
+            present_key_value = present_key_value + cross_attn_present_key_value
+
+        layer_output = apply_chunking_to_forward(
+            self.feed_forward_chunk,
+            self.chunk_size_feed_forward,
+            self.seq_len_dim,
+            attention_output,
+        )
+        outputs = (layer_output,) + outputs
+
+        # if decoder, return the attn key/values as the last output
+        if self.is_decoder:
+            outputs = outputs + (present_key_value,)
+
+        return outputs
+
+    def feed_forward_chunk(self, attention_output):
+        intermediate_output = self.intermediate(attention_output)
+        layer_output = self.output(intermediate_output, attention_output)
+        return layer_output
+
+
+class BertEncoder(nn.Module):
+    def __init__(self, config):
+        super().__init__()
+        self.config = config
+        self.layer = nn.ModuleList(
+            [BertLayer(config) for _ in range(config.num_hidden_layers)]
+        )
+
+    def forward(
+        self,
+        hidden_states,
+        attention_mask=None,
+        head_mask=None,
+        encoder_hidden_states=None,
+        encoder_attention_mask=None,
+        past_key_values=None,
+        use_cache=None,
+        output_attentions=False,
+        output_hidden_states=False,
+        return_dict=True,
+    ):
+        all_hidden_states = () if output_hidden_states else None
+        all_self_attentions = () if output_attentions else None
+        all_cross_attentions = (
+            () if output_attentions and self.config.add_cross_attention else None
+        )
+
+        next_decoder_cache = () if use_cache else None
+        for i, layer_module in enumerate(self.layer):
+            if output_hidden_states:
+                all_hidden_states = all_hidden_states + (hidden_states,)
+
+            layer_head_mask = head_mask[i] if head_mask is not None else None
+            past_key_value = past_key_values[i] if past_key_values is not None else None
+
+            if getattr(self.config, "gradient_checkpointing", False) and self.training:
+                if use_cache:
+                    use_cache = False
+
+                def create_custom_forward(module):
+                    def custom_forward(*inputs):
+                        return module(*inputs, past_key_value, output_attentions)
+
+                    return custom_forward
+
+                layer_outputs = torch.utils.checkpoint.checkpoint(
+                    create_custom_forward(layer_module),
+                    hidden_states,
+                    attention_mask,
+                    layer_head_mask,
+                    encoder_hidden_states,
+                    encoder_attention_mask,
+                )
+            else:
+                layer_outputs = layer_module(
+                    hidden_states,
+                    attention_mask,
+                    layer_head_mask,
+                    encoder_hidden_states,
+                    encoder_attention_mask,
+                    past_key_value,
+                    output_attentions,
+                )
+
+            hidden_states = layer_outputs[0]
+            if use_cache:
+                next_decoder_cache += (layer_outputs[-1],)
+            if output_attentions:
+                all_self_attentions = all_self_attentions + (layer_outputs[1],)
+                if self.config.add_cross_attention:
+                    all_cross_attentions = all_cross_attentions + (layer_outputs[2],)
+
+        if output_hidden_states:
+            all_hidden_states = all_hidden_states + (hidden_states,)
+
+        if not return_dict:
+            return tuple(
+                v
+                for v in [
+                    hidden_states,
+                    next_decoder_cache,
+                    all_hidden_states,
+                    all_self_attentions,
+                    all_cross_attentions,
+                ]
+                if v is not None
+            )
+        return BaseModelOutputWithPastAndCrossAttentions(
+            last_hidden_state=hidden_states,
+            past_key_values=next_decoder_cache,
+            hidden_states=all_hidden_states,
+            attentions=all_self_attentions,
+            cross_attentions=all_cross_attentions,
+        )
+
+
+class BertOutput(nn.Module):
+    def __init__(self, config):
+        super().__init__()
+        self.dense = nn.Linear(config.intermediate_size, config.hidden_size)
+        self.LayerNorm = nn.LayerNorm(config.hidden_size, eps=config.layer_norm_eps)
+        self.dropout = nn.Dropout(config.hidden_dropout_prob)
+
+    def forward(self, hidden_states, input_tensor):
+        hidden_states = self.dense(hidden_states)
+        hidden_states = self.dropout(hidden_states)
+        hidden_states = self.LayerNorm(hidden_states + input_tensor)
+        return hidden_states
+
+
+# shamelessly stolen from: https://github.com/lucidrains/x-transformers/blob/fb1671342d3b27a748336873c225fbd4dd66b7a1/x_transformers/x_transformers.py#L267
+class AlibiPositionalBias(nn.Module):
+    def __init__(self, heads, **kwargs):
+        super().__init__()
+        self.heads = heads
+        slopes = torch.Tensor(self._get_slopes(heads))
+        slopes = rearrange(slopes, "h -> h 1 1")
+        self.register_buffer("slopes", slopes, persistent=False)
+        self.register_buffer("bias", None, persistent=False)
+
+    def get_bias(self, i, j, device):
+        i_arange = torch.arange(j - i, j, device=device)
+        j_arange = torch.arange(j, device=device)
+        bias = -torch.abs(
+            rearrange(j_arange, "j -> 1 1 j") - rearrange(i_arange, "i -> 1 i 1")
+        )
+        return bias
+
+    @staticmethod
+    def _get_slopes(heads):
+        def get_slopes_power_of_2(n):
+            start = 2 ** (-(2 ** -(math.log2(n) - 3)))
+            ratio = start
+            return [start * ratio**i for i in range(n)]
+
+        if math.log2(heads).is_integer():
+            return get_slopes_power_of_2(heads)
+
+        closest_power_of_2 = 2 ** math.floor(math.log2(heads))
+        return (
+            get_slopes_power_of_2(closest_power_of_2)
+            + get_slopes_power_of_2(2 * closest_power_of_2)[0::2][
+                : heads - closest_power_of_2
+            ]
+        )
+
+    def forward(self, qk_dots):
+        h, i, j, device = *qk_dots.shape[-3:], qk_dots.device
+
+        if self.bias is not None and self.bias.shape[-1] >= j:
+            return qk_dots + self.bias[..., :i, :j]
+
+        bias = self.get_bias(i, j, device)
+        bias = bias * self.slopes
+
+        num_heads_unalibied = h - bias.shape[0]
+        bias = F.pad(bias, (0, 0, 0, 0, 0, num_heads_unalibied))
+        self.register_buffer("bias", bias, persistent=False)
+
+        return qk_dots + self.bias
+
+
+class BertModel(BertPreTrainedModel):
+    def __init__(self, config):
+        super().__init__(config)
+        self.embeddings = BertEmbeddings(config)
+
+        if config.embedding_size != config.hidden_size:
+            self.embeddings_project = nn.Linear(
+                config.embedding_size, config.hidden_size
+            )
+
+        self.encoder = BertEncoder(config)
+        self.config = config
+        self.init_weights()
+
+    def get_input_embeddings(self):
+        return self.embeddings.word_embeddings
+
+    def set_input_embeddings(self, value):
+        self.embeddings.word_embeddings = value
+
+    def _prune_heads(self, heads_to_prune):
+        """
+        Prunes heads of the model. heads_to_prune: dict of {layer_num: list of heads to prune in this layer} See base
+        class PreTrainedModel
+        """
+        for layer, heads in heads_to_prune.items():
+            self.encoder.layer[layer].attention.prune_heads(heads)
+
+    def forward(
+        self,
+        input_ids=None,
+        attention_mask=None,
+        token_type_ids=None,
+        position_ids=None,
+        head_mask=None,
+        inputs_embeds=None,
+        output_attentions=None,
+        output_hidden_states=None,
+        return_dict=None,
+    ):
+        output_attentions = (
+            output_attentions
+            if output_attentions is not None
+            else self.config.output_attentions
+        )
+        output_hidden_states = (
+            output_hidden_states
+            if output_hidden_states is not None
+            else self.config.output_hidden_states
+        )
+        return_dict = (
+            return_dict if return_dict is not None else self.config.use_return_dict
+        )
+
+        if input_ids is not None and inputs_embeds is not None:
+            raise ValueError(
+                "You cannot specify both input_ids and inputs_embeds at the same time"
+            )
+        elif input_ids is not None:
+            input_shape = input_ids.size()
+            batch_size, seq_length = input_shape
+        elif inputs_embeds is not None:
+            input_shape = inputs_embeds.size()[:-1]
+        else:
+            raise ValueError("You have to specify either input_ids or inputs_embeds")
+
+        device = input_ids.device if input_ids is not None else inputs_embeds.device
+
+        if attention_mask is None:
+            attention_mask = torch.ones(input_shape, device=device)
+        if token_type_ids is None:
+            if hasattr(self.embeddings, "token_type_ids"):
+                buffered_token_type_ids = self.embeddings.token_type_ids[:, :seq_length]
+                buffered_token_type_ids_expanded = buffered_token_type_ids.expand(
+                    batch_size, seq_length
+                )
+                token_type_ids = buffered_token_type_ids_expanded
+            else:
+                token_type_ids = torch.zeros(
+                    input_shape, dtype=torch.long, device=device
+                )
+
+        extended_attention_mask = self.get_extended_attention_mask(
+            attention_mask, input_shape, device
+        )
+        head_mask = self.get_head_mask(head_mask, self.config.num_hidden_layers)
+
+        hidden_states = self.embeddings(
+            input_ids=input_ids,
+            position_ids=position_ids,
+            token_type_ids=token_type_ids,
+            inputs_embeds=inputs_embeds,
+        )
+
+        if hasattr(self, "embeddings_project"):
+            hidden_states = self.embeddings_project(hidden_states)
+
+        hidden_states = self.encoder(
+            hidden_states,
+            attention_mask=extended_attention_mask,
+            head_mask=head_mask,
+            output_attentions=output_attentions,
+            output_hidden_states=output_hidden_states,
+            return_dict=return_dict,
+        )
+
+        return hidden_states
+
+
+class BertSelfOutput(nn.Module):
+    def __init__(self, config):
+        super().__init__()
+        self.dense = nn.Linear(config.hidden_size, config.hidden_size)
+        if config.prenorm:
+            self.norm = nn.Identity()
+        else:
+            if config.attn_norm_layer_type == "layer_norm":
+                self.norm = nn.LayerNorm(config.hidden_size)
+            elif config.attn_norm_layer_type == "group_norm":
+                self.norm = nn.GroupNorm(
+                    num_groups=config.attn_num_groups, num_channels=config.hidden_size
+                )
+            else:
+                raise ValueError(
+                    f"Unknown attn_norm_layer_type {config.attn_norm_layer_type}"
+                )
+
+        self.dropout = nn.Dropout(config.hidden_dropout_prob)
+
+    def forward(self, hidden_states, input_tensor):
+        hidden_states = self.dense(hidden_states)
+        hidden_states = self.dropout(hidden_states)
+        if isinstance(self.norm, nn.GroupNorm):
+            reshaped = hidden_states + input_tensor
+            # group norm only works over channel dim
+            reshaped = reshaped.permute(0, 2, 1)
+            hidden_states = self.norm(reshaped)
+            hidden_states = hidden_states.permute(0, 2, 1)
+        else:
+            hidden_states = self.norm(hidden_states + input_tensor)
+        return hidden_states
+
+
+class BertSelfAttention(nn.Module):
+    def __init__(self, config):
+        super().__init__()
+        if config.hidden_size % config.num_attention_heads != 0 and not hasattr(
+            config, "embedding_size"
+        ):
+            raise ValueError(
+                f"The hidden size ({config.hidden_size}) is not a multiple of the number of attention "
+                f"heads ({config.num_attention_heads})"
+            )
+
+        self.num_attention_heads = config.num_attention_heads
+        self.attention_head_size = int(config.hidden_size / config.num_attention_heads)
+        self.all_head_size = self.num_attention_heads * self.attention_head_size
+
+        self.query = nn.Linear(config.hidden_size, self.all_head_size)
+        self.key = nn.Linear(config.hidden_size, self.all_head_size)
+        self.value = nn.Linear(config.hidden_size, self.all_head_size)
+
+        self.dropout = nn.Dropout(config.attention_probs_dropout_prob)
+        self.position_embedding_type = getattr(
+            config, "position_embedding_type", "absolute"
+        )
+        if (
+            self.position_embedding_type == "relative_key"
+            or self.position_embedding_type == "relative_key_query"
+        ):
+            self.max_position_embeddings = config.max_position_embeddings
+            self.distance_embedding = nn.Embedding(
+                2 * config.max_position_embeddings - 1, self.attention_head_size
+            )
+        elif self.position_embedding_type == "rotary":
+            self.rotary = RotaryEmbedding(dim=self.attention_head_size)
+        elif self.position_embedding_type == "alibi":
+            self.alibi = AlibiPositionalBias(self.num_attention_heads)
+
+        self.is_decoder = config.is_decoder
+
+        if config.mup:
+            self.attention_scaling_factor = self.attention_head_size
+        else:
+            self.attention_scaling_factor = math.sqrt(self.attention_head_size)
+
+    def transpose_for_scores(self, x):
+        new_x_shape = x.size()[:-1] + (
+            self.num_attention_heads,
+            self.attention_head_size,
+        )
+        x = x.view(*new_x_shape)
+        return x.permute(0, 2, 1, 3)
+
+    def forward(
+        self,
+        hidden_states,
+        attention_mask=None,
+        head_mask=None,
+        encoder_hidden_states=None,
+        encoder_attention_mask=None,
+        past_key_value=None,
+        output_attentions=False,
+    ):
+        mixed_query_layer = self.query(hidden_states)
+
+        # If this is instantiated as a cross-attention module, the keys
+        # and values come from an encoder; the attention mask needs to be
+        # such that the encoder's padding tokens are not attended to.
+        is_cross_attention = encoder_hidden_states is not None
+
+        if is_cross_attention and past_key_value is not None:
+            # reuse k,v, cross_attentions
+            key_layer = past_key_value[0]
+            value_layer = past_key_value[1]
+            attention_mask = encoder_attention_mask
+        elif is_cross_attention:
+            key_layer = self.transpose_for_scores(self.key(encoder_hidden_states))
+            value_layer = self.transpose_for_scores(self.value(encoder_hidden_states))
+            attention_mask = encoder_attention_mask
+        elif past_key_value is not None:
+            key_layer = self.transpose_for_scores(self.key(hidden_states))
+            value_layer = self.transpose_for_scores(self.value(hidden_states))
+            key_layer = torch.cat([past_key_value[0], key_layer], dim=2)
+            value_layer = torch.cat([past_key_value[1], value_layer], dim=2)
+        else:
+            key_layer = self.transpose_for_scores(self.key(hidden_states))
+            value_layer = self.transpose_for_scores(self.value(hidden_states))
+
+        query_layer = self.transpose_for_scores(mixed_query_layer)
+
+        if self.is_decoder:
+            # if cross_attention save Tuple(torch.Tensor, torch.Tensor) of all cross attention key/value_states.
+            # Further calls to cross_attention layer can then reuse all cross-attention
+            # key/value_states (first "if" case)
+            # if uni-directional self-attention (decoder) save Tuple(torch.Tensor, torch.Tensor) of
+            # all previous decoder key/value_states. Further calls to uni-directional self-attention
+            # can concat previous decoder key/value_states to current projected key/value_states (third "elif" case)
+            # if encoder bi-directional self-attention `past_key_value` is always `None`
+            past_key_value = (key_layer, value_layer)
+
+        if self.position_embedding_type == "rotary":
+            query_layer = self.rotary.rotate_queries_or_keys(query_layer)
+            key_layer = self.rotary.rotate_queries_or_keys(key_layer)
+
+        # Take the dot product between "query" and "key" to get the raw attention scores.
+        attention_scores = torch.matmul(query_layer, key_layer.transpose(-1, -2))
+
+        if (
+            self.position_embedding_type == "relative_key"
+            or self.position_embedding_type == "relative_key_query"
+        ):
+            seq_length = hidden_states.size()[1]
+            position_ids_l = torch.arange(
+                seq_length, dtype=torch.long, device=hidden_states.device
+            ).view(-1, 1)
+            position_ids_r = torch.arange(
+                seq_length, dtype=torch.long, device=hidden_states.device
+            ).view(1, -1)
+            distance = position_ids_l - position_ids_r
+            positional_embedding = self.distance_embedding(
+                distance + self.max_position_embeddings - 1
+            )
+            positional_embedding = positional_embedding.to(
+                dtype=query_layer.dtype
+            )  # fp16 compatibility
+
+            if self.position_embedding_type == "relative_key":
+                relative_position_scores = torch.einsum(
+                    "bhld,lrd->bhlr", query_layer, positional_embedding
+                )
+                attention_scores = attention_scores + relative_position_scores
+            elif self.position_embedding_type == "relative_key_query":
+                relative_position_scores_query = torch.einsum(
+                    "bhld,lrd->bhlr", query_layer, positional_embedding
+                )
+                relative_position_scores_key = torch.einsum(
+                    "bhrd,lrd->bhlr", key_layer, positional_embedding
+                )
+                attention_scores = (
+                    attention_scores
+                    + relative_position_scores_query
+                    + relative_position_scores_key
+                )
+
+        # attention scaling -> for mup need to rescale to 1/d
+        attention_scores = attention_scores / self.attention_scaling_factor
+
+        if self.position_embedding_type == "alibi":
+            attention_scores = self.alibi(attention_scores)
+
+        if attention_mask is not None:
+            # Apply the attention mask is (precomputed for all layers in ElectraModel forward() function)
+            attention_scores = attention_scores + attention_mask
+
+        # Normalize the attention scores to probabilities.
+        attention_probs = nn.Softmax(dim=-1)(attention_scores)
+
+        # This is actually dropping out entire tokens to attend to, which might
+        # seem a bit unusual, but is taken from the original Transformer paper.
+        attention_probs = self.dropout(attention_probs)
+
+        # Mask heads if we want to
+        if head_mask is not None:
+            attention_probs = attention_probs * head_mask
+
+        context_layer = torch.matmul(attention_probs, value_layer)
+
+        context_layer = context_layer.permute(0, 2, 1, 3).contiguous()
+        new_context_layer_shape = context_layer.size()[:-2] + (self.all_head_size,)
+        context_layer = context_layer.view(*new_context_layer_shape)
+
+        outputs = (
+            (context_layer, attention_probs) if output_attentions else (context_layer,)
+        )
+
+        if self.is_decoder:
+            outputs = outputs + (past_key_value,)
+        return outputs
+
+
+class BertAttention(nn.Module):
+    def __init__(self, config):
+        super().__init__()
+        self.self = BertSelfAttention(config)
+        self.output = BertSelfOutput(config)
+        if config.prenorm:
+            if config.attn_norm_layer_type == "layer_norm":
+                self.prenorm = nn.LayerNorm(
+                    config.hidden_size, eps=config.layer_norm_eps
+                )
+            elif config.attn_norm_layer_type == "group_norm":
+                self.prenorm = nn.GroupNorm(
+                    num_groups=config.attn_num_groups,
+                    num_channels=config.hidden_size,
+                    eps=config.layer_norm_eps,
+                )
+            else:
+                raise ValueError(
+                    f"Unknown attn_norm_layer_type {config.attn_norm_layer_type}"
+                )
+        else:
+            self.prenorm = nn.Identity()
+
+        self.pruned_heads = set()
+
+    def prune_heads(self, heads):
+        if len(heads) == 0:
+            return
+        heads, index = find_pruneable_heads_and_indices(
+            heads,
+            self.self.num_attention_heads,
+            self.self.attention_head_size,
+            self.pruned_heads,
+        )
+
+        # Prune linear layers
+        self.self.query = prune_linear_layer(self.self.query, index)
+        self.self.key = prune_linear_layer(self.self.key, index)
+        self.self.value = prune_linear_layer(self.self.value, index)
+        self.output.dense = prune_linear_layer(self.output.dense, index, dim=1)
+
+        # Update hyper params and store pruned heads
+        self.self.num_attention_heads = self.self.num_attention_heads - len(heads)
+        self.self.all_head_size = (
+            self.self.attention_head_size * self.self.num_attention_heads
+        )
+        self.pruned_heads = self.pruned_heads.union(heads)
+
+    def forward(
+        self,
+        hidden_states,
+        attention_mask=None,
+        head_mask=None,
+        encoder_hidden_states=None,
+        encoder_attention_mask=None,
+        past_key_value=None,
+        output_attentions=False,
+    ):
+        # if we are doing prenorm instead of postnorm
+        if isinstance(self.prenorm, nn.GroupNorm):
+            # group norm only works over channel dim
+            reshaped = hidden_states.permute(0, 2, 1)
+            hidden_states = self.prenorm(reshaped)
+            hidden_states = hidden_states.permute(0, 2, 1)
+        else:
+            hidden_states = self.prenorm(hidden_states)
+
+        self_outputs = self.self(
+            hidden_states,
+            attention_mask,
+            head_mask,
+            encoder_hidden_states,
+            encoder_attention_mask,
+            past_key_value,
+            output_attentions,
+        )
+        attention_output = self.output(self_outputs[0], hidden_states)
+        outputs = (attention_output,) + self_outputs[
+            1:
+        ]  # add attentions if we output them
+        return outputs
+
+
+class BertPredictionHeadTransform(nn.Module):
+    def __init__(self, config):
+        super().__init__()
+        self.dense = nn.Linear(config.hidden_size, config.hidden_size)
+        if isinstance(config.hidden_act, str):
+            self.transform_act_fn = get_activation(config.hidden_act)
+        else:
+            self.transform_act_fn = config.hidden_act
+        self.LayerNorm = nn.LayerNorm(config.hidden_size, eps=config.layer_norm_eps)
+
+    def forward(self, hidden_states: torch.Tensor) -> torch.Tensor:
+        hidden_states = self.dense(hidden_states)
+        hidden_states = self.transform_act_fn(hidden_states)
+        hidden_states = self.LayerNorm(hidden_states)
+        return hidden_states
+
+
+class BertLMPredictionHead(nn.Module):
+    def __init__(self, config):
+        super().__init__()
+        self.transform = BertPredictionHeadTransform(config)
+
+        # The output weights are the same as the input embeddings, but there is
+        # an output-only bias for each token.
+        if config.mup:
+            self.decoder = MuReadout(
+                config.hidden_size,
+                config.vocab_size,
+                output_mult=config.output_mult,
+                readout_zero_init=config.readout_zero_init,
+                bias=False,
+            )
+        else:
+            self.decoder = nn.Linear(config.hidden_size, config.vocab_size, bias=False)
+
+        self.bias = nn.Parameter(torch.zeros(config.vocab_size))
+
+        # Need a link between the two variables so that the bias is correctly resized with `resize_token_embeddings`
+        self.decoder.bias = self.bias
+
+    def forward(self, hidden_states):
+        hidden_states = self.transform(hidden_states)
+        hidden_states = self.decoder(hidden_states)
+        return hidden_states
+
+
+class BertOnlyMLMHead(nn.Module):
+    def __init__(self, config):
+        super().__init__()
+        self.predictions = BertLMPredictionHead(config)
+
+    def forward(self, sequence_output: torch.Tensor) -> torch.Tensor:
+        prediction_scores = self.predictions(sequence_output)
+        return prediction_scores
+
+
+class BertForMaskedLM(BertPreTrainedModel):
+    def __init__(self, config):
+        super().__init__(config)
+
+        self.bert = BertModel(config)
+        self.cls = BertOnlyMLMHead(config)
+
+        self.init_weights()
+
+    def get_output_embeddings(self):
+        return self.cls.predictions.decoder
+
+    def set_output_embeddings(self, new_embeddings):
+        self.cls.predictions.decoder = new_embeddings
+
+    def forward(
+        self,
+        input_ids=None,
+        attention_mask=None,
+        token_type_ids=None,
+        position_ids=None,
+        head_mask=None,
+        inputs_embeds=None,
+        labels=None,
+        output_attentions=None,
+        output_hidden_states=None,
+        return_dict=None,
+    ):
+        r"""
+        labels (:obj:`torch.LongTensor` of shape :obj:`(batch_size, sequence_length)`, `optional`):
+            Labels for computing the masked language modeling loss. Indices should be in ``[-100, 0, ...,
+            config.vocab_size]`` (see ``input_ids`` docstring) Tokens with indices set to ``-100`` are ignored
+            (masked), the loss is only computed for the tokens with labels in ``[0, ..., config.vocab_size]``
+        """
+        return_dict = (
+            return_dict if return_dict is not None else self.config.use_return_dict
+        )
+
+        outputs = self.bert(
+            input_ids,
+            attention_mask,
+            token_type_ids,
+            position_ids,
+            head_mask,
+            inputs_embeds,
+            output_attentions,
+            output_hidden_states,
+            return_dict,
+        )
+
+        sequence_output = outputs[0]
+        prediction_scores = self.cls(sequence_output)
+
+        loss = None
+        # Masked language modeling softmax layer
+        if labels is not None:
+            loss_fct = nn.CrossEntropyLoss()  # -100 index = padding token
+            loss = loss_fct(
+                prediction_scores.view(-1, self.config.vocab_size), labels.view(-1)
+            )
+
+        if not return_dict:
+            output = (prediction_scores,) + outputs[2:]
+            return ((loss,) + output) if loss is not None else output
+
+        return MaskedLMOutput(
+            loss=loss,
+            logits=prediction_scores,
+            hidden_states=outputs.hidden_states,
+            attentions=outputs.attentions,
+        )

pytorch_model.bin

@@ -0,0 +1,3 @@
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+oid sha256:3b463d1df77bc9a3a3395099f491550d098f41f7850aaf6712f2d2df640c4f9a
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