| [build-system] |
| requires = ["setuptools>=68", "wheel"] |
| build-backend = "setuptools.build_meta" |
|
|
| [project] |
| name = "pivot-transcriptomics" |
| version = "0.2.0" |
| description = "Perturbation-informed endpoint maps for transcriptomic state control" |
| readme = "README.md" |
| requires-python = ">=3.11,<3.14" |
| license = {file = "LICENSE"} |
| dependencies = ["numpy>=1.26,<3", "scipy>=1.12,<2", "pandas>=2.1,<4", "scikit-learn>=1.5,<2", "torch>=2.2,<3", "anndata>=0.10,<0.14", "scanpy>=1.10,<1.13", "pyarrow>=15", "matplotlib>=3.8,<4", "requests>=2.31"] |
|
|
| [project.optional-dependencies] |
| test = ["pytest>=8"] |
| hub = ["huggingface-hub>=0.27"] |
|
|
| [project.scripts] |
| pivot = "pivot.cli:main" |
|
|
| [tool.setuptools.packages.find] |
| where = ["src"] |
|
|
| [tool.pytest.ini_options] |
| testpaths = ["tests"] |
|
|
