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ConvergeBio
/
virtual-cell-patient

Feature Extraction
Transformers
Safetensors
virtual_cell_patient
biology
genomics
single-cell-rna-seq
patient-classification
custom_code
Model card Files Files and versions
xet
Community

Instructions to use ConvergeBio/virtual-cell-patient with libraries, inference providers, notebooks, and local apps. Follow these links to get started.

  • Libraries
  • Transformers

    How to use ConvergeBio/virtual-cell-patient with Transformers:

    # Use a pipeline as a high-level helper
    from transformers import pipeline
    
    pipe = pipeline("feature-extraction", model="ConvergeBio/virtual-cell-patient", trust_remote_code=True)
    # Load model directly
    from transformers import AutoModel
    model = AutoModel.from_pretrained("ConvergeBio/virtual-cell-patient", trust_remote_code=True, dtype="auto")
  • Notebooks
  • Google Colab
  • Kaggle
virtual-cell-patient
320 MB
Ctrl+K
Ctrl+K
  • 1 contributor
History: 25 commits
danielle-miller-sayag's picture
danielle-miller-sayag
Update PaSCient citation to published Cell Systems paper
cf16572 verified 6 days ago
  • LICENSE
    11.3 kB
    Upload LICENSE with huggingface_hub 9 days ago
  • NOTICE
    149 Bytes
    Upload NOTICE with huggingface_hub 9 days ago
  • README.md
    5.86 kB
    Update PaSCient citation to published Cell Systems paper 6 days ago
  • config.json
    1.03 kB
    initial: weights + modeling code + lean config 11 days ago
  • gene_names.txt
    128 kB
    initial: weights + modeling code + lean config 11 days ago
  • model.safetensors
    320 MB
    xet
    initial: weights + modeling code + lean config 11 days ago
  • modeling_virtual_cell.py
    9.59 kB
    Upload modeling_virtual_cell.py with huggingface_hub 9 days ago
  • requirements.txt
    168 Bytes
    initial: weights + modeling code + lean config 10 days ago
  • train.py
    7.74 kB
    Upload train.py with huggingface_hub 9 days ago