FOMO-MRI/AMAES_resenc_b

ResEnc UNet pretrained on FOMO300K using AMAES

This repository contains the checkpoint of the model from the FOMO300K paper.

• Network: Resenc Unet B with 102M parameters (model definition)
• Pretext Task: AMAES.
• Dataset: FOMO300K.
• Code: Asparagus.

Finetuning the model for Segmentation tasks

To finetune the model using the default config, simply use the following command

asp_finetune_seg task=Task123_Your_Segmentation_Task checkpoint_path=/path/to/model.ckpt

Installing Asparagus

For instructions on how to install asparagus, preprocess your data, and make your own configs, please refer to the Asparagus Readme.