| { |
| "dataset_name": "Dataset225_nnInteractiveV2", |
| "plans_name": "nnUNetResEncUNetLPlans_noResampling", |
| "original_median_spacing_after_transp": [ |
| 1.25, |
| 1.0, |
| 1.0 |
| ], |
| "original_median_shape_after_transp": [ |
| 139, |
| 248, |
| 250 |
| ], |
| "image_reader_writer": "NibabelIOWithReorient", |
| "transpose_forward": [ |
| 0, |
| 1, |
| 2 |
| ], |
| "transpose_backward": [ |
| 0, |
| 1, |
| 2 |
| ], |
| "configurations": { |
| "3d_fullres_ps192": { |
| "data_identifier": "nnUNetResEncUNetLPlans_noResampling_3d_fullres", |
| "preprocessor_name": "DefaultPreprocessor", |
| "batch_size": 2, |
| "patch_size": [ |
| 192, |
| 192, |
| 192 |
| ], |
| "median_image_size_in_voxels": [ |
| 168.0, |
| 239.0, |
| 282.0 |
| ], |
| "spacing": [ |
| 1.5, |
| 1.5, |
| 1.5 |
| ], |
| "normalization_schemes": [ |
| "ZScoreNormalization" |
| ], |
| "use_mask_for_norm": [ |
| false |
| ], |
| "resampling_fn_data": "no_resampling_hack", |
| "resampling_fn_seg": "no_resampling_hack", |
| "resampling_fn_data_kwargs": {}, |
| "resampling_fn_seg_kwargs": {}, |
| "resampling_fn_probabilities": "no_resampling_hack", |
| "resampling_fn_probabilities_kwargs": {}, |
| "architecture": { |
| "network_class_name": "dynamic_network_architectures.architectures.unet.ResidualEncoderUNet", |
| "arch_kwargs": { |
| "n_stages": 6, |
| "features_per_stage": [ |
| 32, |
| 64, |
| 128, |
| 256, |
| 320, |
| 320 |
| ], |
| "conv_op": "torch.nn.modules.conv.Conv3d", |
| "kernel_sizes": [ |
| [ |
| 3, |
| 3, |
| 3 |
| ], |
| [ |
| 3, |
| 3, |
| 3 |
| ], |
| [ |
| 3, |
| 3, |
| 3 |
| ], |
| [ |
| 3, |
| 3, |
| 3 |
| ], |
| [ |
| 3, |
| 3, |
| 3 |
| ], |
| [ |
| 3, |
| 3, |
| 3 |
| ] |
| ], |
| "strides": [ |
| [ |
| 1, |
| 1, |
| 1 |
| ], |
| [ |
| 2, |
| 2, |
| 2 |
| ], |
| [ |
| 2, |
| 2, |
| 2 |
| ], |
| [ |
| 2, |
| 2, |
| 2 |
| ], |
| [ |
| 2, |
| 2, |
| 2 |
| ], |
| [ |
| 2, |
| 2, |
| 2 |
| ] |
| ], |
| "n_blocks_per_stage": [ |
| 1, |
| 3, |
| 4, |
| 6, |
| 6, |
| 6 |
| ], |
| "n_conv_per_stage_decoder": [ |
| 1, |
| 1, |
| 1, |
| 1, |
| 1 |
| ], |
| "conv_bias": true, |
| "norm_op": "torch.nn.modules.instancenorm.InstanceNorm3d", |
| "norm_op_kwargs": { |
| "eps": 1e-05, |
| "affine": true |
| }, |
| "dropout_op": null, |
| "dropout_op_kwargs": null, |
| "nonlin": "torch.nn.LeakyReLU", |
| "nonlin_kwargs": { |
| "inplace": true |
| } |
| }, |
| "_kw_requires_import": [ |
| "conv_op", |
| "norm_op", |
| "dropout_op", |
| "nonlin" |
| ] |
| }, |
| "batch_dice": false |
| }, |
| "3d_fullres_ps192_bs16": { |
| "inherits_from": "3d_fullres_ps192", |
| "batch_size": 16 |
| }, |
| "3d_fullres_ps192_bs24": { |
| "inherits_from": "3d_fullres_ps192", |
| "batch_size": 24 |
| }, |
| "3d_fullres_ps192_bs2": { |
| "inherits_from": "3d_fullres_ps192_bs16", |
| "batch_size": 2 |
| }, |
| "3d_fullres_ps128_bs2": { |
| "inherits_from": "3d_fullres_ps192_bs2", |
| "patch_size": [ |
| 128, |
| 128, |
| 128 |
| ] |
| }, |
| "3d_fullres_ps384_bs16": { |
| "inherits_from": "3d_fullres_ps192_bs16", |
| "patch_size": [ |
| 384, |
| 384, |
| 384 |
| ] |
| } |
| }, |
| "experiment_planner_used": "nnUNetPlannerResEncL_noResampling", |
| "label_manager": "LabelManager", |
| "foreground_intensity_properties_per_channel": { |
| "0": { |
| "max": 4094640.0, |
| "mean": 1683.86181640625, |
| "median": 374.0, |
| "min": -32768.0, |
| "percentile_00_5": -970.0, |
| "percentile_99_5": 8047.0, |
| "std": 26629.310546875 |
| } |
| } |
| } |