Text Generation
Transformers
PyTorch
bart
mass-spectrometry
GC-EI-MS
Transformer
molecular-structure-reconstruction
compound-identification
Instructions to use MS-ML/SpecTUS_pretrained_only with libraries, inference providers, notebooks, and local apps. Follow these links to get started.
- Libraries
- Transformers
How to use MS-ML/SpecTUS_pretrained_only with Transformers:
# Use a pipeline as a high-level helper from transformers import pipeline pipe = pipeline("text-generation", model="MS-ML/SpecTUS_pretrained_only")# Load model directly from transformers import AutoTokenizer, AutoModelForSeq2SeqLM tokenizer = AutoTokenizer.from_pretrained("MS-ML/SpecTUS_pretrained_only") model = AutoModelForSeq2SeqLM.from_pretrained("MS-ML/SpecTUS_pretrained_only") - Notebooks
- Google Colab
- Kaggle
- Local Apps
- vLLM
How to use MS-ML/SpecTUS_pretrained_only with vLLM:
Install from pip and serve model
# Install vLLM from pip: pip install vllm # Start the vLLM server: vllm serve "MS-ML/SpecTUS_pretrained_only" # Call the server using curl (OpenAI-compatible API): curl -X POST "http://localhost:8000/v1/completions" \ -H "Content-Type: application/json" \ --data '{ "model": "MS-ML/SpecTUS_pretrained_only", "prompt": "Once upon a time,", "max_tokens": 512, "temperature": 0.5 }'Use Docker
docker model run hf.co/MS-ML/SpecTUS_pretrained_only
- SGLang
How to use MS-ML/SpecTUS_pretrained_only with SGLang:
Install from pip and serve model
# Install SGLang from pip: pip install sglang # Start the SGLang server: python3 -m sglang.launch_server \ --model-path "MS-ML/SpecTUS_pretrained_only" \ --host 0.0.0.0 \ --port 30000 # Call the server using curl (OpenAI-compatible API): curl -X POST "http://localhost:30000/v1/completions" \ -H "Content-Type: application/json" \ --data '{ "model": "MS-ML/SpecTUS_pretrained_only", "prompt": "Once upon a time,", "max_tokens": 512, "temperature": 0.5 }'Use Docker images
docker run --gpus all \ --shm-size 32g \ -p 30000:30000 \ -v ~/.cache/huggingface:/root/.cache/huggingface \ --env "HF_TOKEN=<secret>" \ --ipc=host \ lmsysorg/sglang:latest \ python3 -m sglang.launch_server \ --model-path "MS-ML/SpecTUS_pretrained_only" \ --host 0.0.0.0 \ --port 30000 # Call the server using curl (OpenAI-compatible API): curl -X POST "http://localhost:30000/v1/completions" \ -H "Content-Type: application/json" \ --data '{ "model": "MS-ML/SpecTUS_pretrained_only", "prompt": "Once upon a time,", "max_tokens": 512, "temperature": 0.5 }' - Docker Model Runner
How to use MS-ML/SpecTUS_pretrained_only with Docker Model Runner:
docker model run hf.co/MS-ML/SpecTUS_pretrained_only
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The model is a Transformer-based neural network trained to elucidate molecular structures from GC-EI-MS spectra.
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The model was pretrained on a large dataset of 9.4M synthetic spectra generated from two identical sets of 4.7M
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The SpecTUS model pretrained on synth2_2x4.7M for 2x112k steps.
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The model is a Transformer-based neural network trained to elucidate molecular structures from GC-EI-MS spectra.
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The model was pretrained on a large dataset of 9.4M synthetic spectra generated from two identical sets of 4.7M
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