CeLLaTe-AL-Testbase_adapted_tok

This model is a fine-tuned version of microsoft/BiomedNLP-BiomedBERT-base-uncased-abstract-fulltext on an unknown dataset. It achieves the following results on the evaluation set:

  • Loss: 0.4629
  • Precision: 0.6069
  • Recall: 0.5631
  • F1: 0.5842
  • Accuracy: 0.9307

Model description

More information needed

Intended uses & limitations

More information needed

Training and evaluation data

More information needed

Training procedure

Training hyperparameters

The following hyperparameters were used during training:

  • learning_rate: 2e-05
  • train_batch_size: 16
  • eval_batch_size: 16
  • seed: 3407
  • optimizer: Use OptimizerNames.ADAMW_TORCH with betas=(0.9,0.999) and epsilon=1e-08 and optimizer_args=No additional optimizer arguments
  • lr_scheduler_type: linear
  • lr_scheduler_warmup_ratio: 0.1
  • num_epochs: 20
  • mixed_precision_training: Native AMP

Training results

Training Loss Epoch Step Validation Loss Precision Recall F1 Accuracy
1.0711 1.0 115 0.4380 0.2039 0.1800 0.1912 0.8599
0.2579 2.0 230 0.2830 0.4117 0.3991 0.4053 0.9112
0.1083 3.0 345 0.2841 0.5199 0.4894 0.5042 0.9222
0.0707 4.0 460 0.2899 0.5291 0.5481 0.5384 0.9240
0.0472 5.0 575 0.2954 0.5816 0.5354 0.5576 0.9297
0.0336 6.0 690 0.3135 0.5902 0.5354 0.5615 0.9296
0.0232 7.0 805 0.3596 0.6125 0.5419 0.5750 0.9299
0.0178 8.0 920 0.3412 0.5675 0.5903 0.5787 0.9285
0.0181 9.0 1035 0.3621 0.6100 0.5470 0.5768 0.9296
0.0132 10.0 1150 0.3638 0.5904 0.5733 0.5817 0.9302
0.0106 11.0 1265 0.4134 0.6078 0.5556 0.5805 0.9303
0.0088 12.0 1380 0.4197 0.6023 0.5579 0.5793 0.9297
0.0071 13.0 1495 0.4162 0.5947 0.5712 0.5828 0.9301
0.0067 14.0 1610 0.4196 0.6077 0.5518 0.5784 0.9305
0.005 15.0 1725 0.4391 0.5892 0.5661 0.5774 0.9295
0.0047 16.0 1840 0.4424 0.5872 0.5682 0.5775 0.9295
0.0042 17.0 1955 0.4632 0.5939 0.5539 0.5732 0.9293
0.0037 18.0 2070 0.4541 0.5971 0.5692 0.5828 0.9300
0.0041 19.0 2185 0.4611 0.6069 0.5631 0.5842 0.9307
0.0034 20.0 2300 0.4573 0.5991 0.5668 0.5825 0.9301

Framework versions

  • Transformers 4.48.2
  • Pytorch 2.4.1+cu121
  • Datasets 3.0.2
  • Tokenizers 0.21.0
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