Add library_name to metadata

#1
by nielsr HF Staff - opened
Files changed (1) hide show
  1. README.md +12 -7
README.md CHANGED
@@ -1,15 +1,16 @@
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  ---
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- license: apache-2.0
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- datasets:
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- - Moreza009/AAV_datasets
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  base_model:
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  - nferruz/ProtGPT2
 
 
 
 
 
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  tags:
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  - biology
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  - protein
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  - medicine
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  - capsid_engineering
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- pipeline_tag: text-generation
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  ---
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  <h1 align="center">AAVGen: Precision Engineering of Adeno-associated Virus for Renal Selective Targeting</h1>
@@ -24,7 +25,7 @@ pipeline_tag: text-generation
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  <img src="https://img.shields.io/badge/python-3.8+-blue.svg" alt="Python 3.8+">
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  </a>
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  <a href="https://github.com/mohammad-gh009/AAVGen">
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- <img src="https://img.shields.io/badge/GitHub-Code-blue.svg?logo=githu" alt="Github">
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  </a>
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  <a href="https://arxiv.org/abs/2602.18915">
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  <img src="https://img.shields.io/badge/arXiv-2602.18915-b31b1b.svg" alt="arXive">
@@ -61,7 +62,9 @@ AAVGen is a generative protein language model designed for precision engineering
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  ### Model Sources
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  - **Repository:** [Moreza009/AAVGen](https://huggingface.co/Moreza009/AAVGen)
 
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  - **Dataset:** [Moreza009/AAV_datasets](https://huggingface.co/datasets/Moreza009/AAV_datasets)
 
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  ---
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@@ -69,7 +72,8 @@ AAVGen is a generative protein language model designed for precision engineering
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  ### Direct Use
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- AAVGen can be used to generate novel AAV capsid protein sequences (VP1) by providing a start token (`<|endoftext|>\nM`). The generated sequences are intended for in silico screening, functional evaluation, and downstream experimental validation in AAV-based gene therapy development. The model is particularly suited for generating capsid variants optimized for renal tropism, high production fitness, and thermal stability.
 
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  ### Downstream Use
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@@ -116,7 +120,8 @@ model = AutoModelForCausalLM.from_pretrained(model_name).to(device)
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  model.eval()
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  # Generate AAV capsid sequences
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- prompt = tokenizer.eos_token + "\n" + "M"
 
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  inputs = tokenizer(prompt, return_tensors="pt").to(device)
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  with torch.no_grad():
 
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  ---
 
 
 
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  base_model:
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  - nferruz/ProtGPT2
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+ datasets:
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+ - Moreza009/AAV_datasets
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+ license: apache-2.0
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+ pipeline_tag: text-generation
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+ library_name: transformers
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  tags:
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  - biology
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  - protein
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  - medicine
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  - capsid_engineering
 
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  ---
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  <h1 align="center">AAVGen: Precision Engineering of Adeno-associated Virus for Renal Selective Targeting</h1>
 
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  <img src="https://img.shields.io/badge/python-3.8+-blue.svg" alt="Python 3.8+">
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  </a>
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  <a href="https://github.com/mohammad-gh009/AAVGen">
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+ <img src="https://img.shields.io/badge/GitHub-Code-blue.svg?logo=github" alt="Github">
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  </a>
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  <a href="https://arxiv.org/abs/2602.18915">
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  <img src="https://img.shields.io/badge/arXiv-2602.18915-b31b1b.svg" alt="arXive">
 
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  ### Model Sources
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  - **Repository:** [Moreza009/AAVGen](https://huggingface.co/Moreza009/AAVGen)
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+ - **Code:** [GitHub](https://github.com/mohammad-gh009/AAVGen)
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  - **Dataset:** [Moreza009/AAV_datasets](https://huggingface.co/datasets/Moreza009/AAV_datasets)
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+ - **Paper:** [arXiv:2602.18915](https://arxiv.org/abs/2602.18915)
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  ---
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  ### Direct Use
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+ AAVGen can be used to generate novel AAV capsid protein sequences (VP1) by providing a start token (`<|endoftext|>
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+ M`). The generated sequences are intended for in silico screening, functional evaluation, and downstream experimental validation in AAV-based gene therapy development. The model is particularly suited for generating capsid variants optimized for renal tropism, high production fitness, and thermal stability.
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  ### Downstream Use
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  model.eval()
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  # Generate AAV capsid sequences
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+ prompt = tokenizer.eos_token + "
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+ " + "M"
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  inputs = tokenizer(prompt, return_tensors="pt").to(device)
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  with torch.no_grad():