STU-Net Large โ€” BraTS 2026 Brain Metastasis Segmentation

STU-Net Large checkpoint trained on the BraTS 2026 Brain Metastasis Segmentation training set (fold 0, checkpoint_best.pth). Part of a three-model ensemble; see the full pipeline at the GitHub repository.

Model Details

  • Architecture: Swin Transformer-based U-Net (large variant)
  • Input: 4 MRI modalities โ€” T1n, T1c, T2w, T2f
  • Output: 5-class segmentation (background, NETC, SNFH, ET, RC)
  • Trainer: STUNetTrainerLarge
  • Checkpoint: checkpoint_best.pth (fold 0)

Label Convention

Label Region
0 Background
1 NETC (Non-Enhancing Tumor Core)
2 SNFH (Surrounding Non-Enhancing FLAIR Hyperintensity)
3 ET (Enhancing Tumor)
4 RC (Resection Cavity)

Usage

Inference code and full ensemble pipeline: GitHub repository

Install STU-Net following the instructions at uni-medical/STU-Net.

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