Add pipeline tag
#4
by
nielsr
HF Staff
- opened
README.md
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license: mit
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# ECGFounder: An Electrocardiogram Foundation Model Built on over 10 Million Recordings with External Evaluation across Multiple Domains
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This is the official implementation of our paper "[An Electrocardiogram Foundation Model Built on over 10 Million Recordings with External Evaluation across Multiple Domains](https://arxiv.org/abs/2410.04133)".
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> Authors: Jun Li, Aaron Aguirre, Junior Moura, Jiarui Jin, Che Liu, Lanhai Zhong, Chenxi Sun, Gari Clifford, Brandon Westover, Shenda Hong.
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## π Getting Started
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π© **News** (Mar 2025): The pre-training checkpoint is now available on [π€ Hugging Face](https://huggingface.co/PKUDigitalHealth/ECGFounder/tree/main)!
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### Installation
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To clone this repository:
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pip install -r requirements.txt
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```
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### Fine-tune on Downstream Tasks
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In our paper, downstream datasets we used are as follows:
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*
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Next, please download the model's checkpoint from the [π€ Hugging Face](https://huggingface.co/PKUDigitalHealth/ECGFounder/tree/main). And place the model weights in path *./checkpoint*
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You can run the jupyter notebook to finetune the model by the example dataset.
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## References
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If you found our work useful in your research, please consider citing our works at:
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> ```
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> @article{li2024electrocardiogram,
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> title={An Electrocardiogram Foundation Model Built on over 10 Million Recordings with External Evaluation across Multiple Domains},
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> author={Li, Jun and Aguirre, Aaron and Moura, Junior and Liu, Che and Zhong, Lanhai and Sun, Chenxi and Clifford
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> journal={arXiv preprint arXiv:2410.04133},
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> year={2024}
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> }
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---
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license: mit
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pipeline_tag: feature-extraction
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# ECGFounder: An Electrocardiogram Foundation Model Built on over 10 Million Recordings with External Evaluation across Multiple Domains
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This is the official implementation of our paper "[An Electrocardiogram Foundation Model Built on over 10 Million Recordings with External Evaluation across Multiple Domains](https://arxiv.org/abs/2410.04133)".
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> Authors: Jun Li, Aaron Aguirre, Junior Moura, Jiarui Jin, Che Liu, Lanhai Zhong, Chenxi Sun, Gari Clifford, Brandon Westover, Shenda Hong.
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For the code, see the [GitHub repository](https://github.com/PKUDigitalHealth/ECGFounder.git).
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## π Getting Started
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π© **News** (Mar 2025): The pre-training checkpoint is now available on [π€ Hugging Face](https://huggingface.co/PKUDigitalHealth/ECGFounder/tree/main)!
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### Installation
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To clone this repository:
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pip install -r requirements.txt
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```
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### Fine-tune on Downstream Tasks
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In our paper, downstream datasets we used are as follows:
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* **MIMIC-ECG**: Please download the [MIMIC-ECG](https://physionet.org/content/mimiciv/2.2/) dataset from physionet.
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Next, please download the model's checkpoint from the [π€ Hugging Face](https://huggingface.co/PKUDigitalHealth/ECGFounder/tree/main). And place the model weights in path *./checkpoint*
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You can run the jupyter notebook to finetune the model by the example dataset.
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## References
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If you found our work useful in your research, please consider citing our works at:
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> ```
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> @article{li2024electrocardiogram,
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> title={An Electrocardiogram Foundation Model Built on over 10 Million Recordings with External Evaluation across Multiple Domains},
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> author={Li, Jun and Aguirre, Aaron and Moura, Junior and Liu, Che and Zhong, Lanhai and Sun, Chenxi and Gari Clifford and Brandon Westover, Shenda Hong},
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> journal={arXiv preprint arXiv:2410.04133},
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> year={2024}
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> }
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