healdette / RESULTS.md
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Results Note Date: September 12, 2025 Version: 1.0.0 Commit: main-2025-09-12 DOI: 10.57967/hf/5917

Execution Details:

python run_pipeline.py --deterministic --seed 42

Environment:

  • Python 3.10.8
  • Environment hash:
  • OS: Windows 10
  • Hardware: CPU-only execution

Input Parameters:

  • Ancestry profile: Native, Irish
  • HLA matches: 2
  • Prior exposures: SARS-CoV-2, Influenza-B
  • Metabolic factor: 1.2
  • Random seed: 42

Generated Sequences Analysis:

ID Length Score Disorder Cys Pairs N-glyc GRAVY pI

Key Findings:

  1. Length distribution: 43-563 amino acids
  2. Personalization scores: 0.62-0.78
  3. Disorder scores: 0.185-0.677
  4. Glycosylation sites: 7 total (avg 1.0 per sequence)
  5. Cysteine pairs: 3/7 sequences have paired cysteines

Validation Status:

  • Environment: See environment.yaml
  • Checksums: See checksums.sha256
  • Full results: validation_results_20250912_152239.json

For reproduction:

  1. Clone repository
  2. Install dependencies from environment.yaml
  3. Run: python run_pipeline.py --deterministic
  4. Verify checksums