2.18 GB

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1 contributor

History: 13 commits

RohanSaha2006

Add tqdm + missing UniKP files, crash-proof predict.py

c6225cb verified 6 days ago

.gitattributes

1.52 kB
initial commit 8 days ago
Dockerfile

173 Bytes
Fix: remove ESM2 dep, zero fallback, drop torch from requirements 8 days ago
README.md

64 Bytes
3-fold ET: ProtT5 + SMILES-T + MACCS + Morgan 6 days ago
build_vocab.py

6.37 kB
ProtT5 + SMILES-T + MACCS + Morgan + GroupKFold ET 7 days ago
dataset.py

1.57 kB
Add tqdm + missing UniKP files, crash-proof predict.py 6 days ago
enumerator.py

8.36 kB
Add tqdm + missing UniKP files, crash-proof predict.py 6 days ago
et_kcat_fold0.pkl
Pickle imports
- No problematic imports detected
What is a pickle import?
341 MB
xet

ProtT5 + SMILES-T + MACCS + Morgan + GroupKFold ET 7 days ago
et_kcat_fold1.pkl
Pickle imports
- No problematic imports detected
What is a pickle import?
341 MB
xet

ProtT5 + SMILES-T + MACCS + Morgan + GroupKFold ET 7 days ago
et_kcat_fold2.pkl
Pickle imports
- No problematic imports detected
What is a pickle import?
342 MB
xet

ProtT5 + SMILES-T + MACCS + Morgan + GroupKFold ET 7 days ago
et_km_fold0.pkl
Pickle imports
- No problematic imports detected
What is a pickle import?
352 MB
xet

ProtT5 + SMILES-T + MACCS + Morgan + GroupKFold ET 7 days ago
et_km_fold1.pkl
Pickle imports
- No problematic imports detected
What is a pickle import?
352 MB
xet

ProtT5 + SMILES-T + MACCS + Morgan + GroupKFold ET 7 days ago
et_km_fold2.pkl
Pickle imports
- No problematic imports detected
What is a pickle import?
352 MB
xet

ProtT5 + SMILES-T + MACCS + Morgan + GroupKFold ET 7 days ago
predict.py

3.62 kB
Add tqdm + missing UniKP files, crash-proof predict.py 6 days ago
pretrain_trfm.py

7.35 kB
ProtT5 + SMILES-T + MACCS + Morgan + GroupKFold ET 7 days ago
prott5_cache.npz

45.1 MB
xet

ExtraTrees 200 trees + PCA + SMOTE + joblib compression 8 days ago
requirements.txt

126 Bytes
Add tqdm + missing UniKP files, crash-proof predict.py 6 days ago
scaler.pkl
Pickle imports
- No problematic imports detected
What is a pickle import?
81.6 kB
xet

ProtT5 + SMILES-T + MACCS + Morgan + GroupKFold ET 7 days ago
smiles_cache.pkl
Pickle imports
- No problematic imports detected
What is a pickle import?
30.8 MB
xet

3-fold ET: ProtT5 + SMILES-T + MACCS + Morgan 6 days ago
trfm_12_23000.pkl
Detected Pickle imports (3)
- "collections.OrderedDict",
- "torch._utils._rebuild_tensor_v2",
- "torch.FloatStorage"
What is a pickle import?
22.1 MB
xet

ProtT5 + SMILES-T + MACCS + Morgan + GroupKFold ET 7 days ago
utils.py

5.91 kB
ProtT5 + SMILES-T + MACCS + Morgan + GroupKFold ET 7 days ago
vocab.pkl
Detected Pickle imports (2)
- "collections.Counter",
- "__main__.WordVocab"
How to fix it?
1.45 kB
xet

ProtT5 + SMILES-T + MACCS + Morgan + GroupKFold ET 7 days ago

Pickle imports

Pickle imports

Pickle imports

Pickle imports

Pickle imports

Pickle imports

Pickle imports

Pickle imports

Detected Pickle imports (3)

Detected Pickle imports (2)