Hugging Face
Models
Datasets
Spaces
Buckets
new
Docs
Enterprise
Pricing
Website
Tasks
HuggingChat
Collections
Languages
Organizations
Community
Blog
Posts
Daily Papers
Learn
Discord
Forum
GitHub
Solutions
Team & Enterprise
Hugging Face PRO
Enterprise Support
Inference Providers
Inference Endpoints
Storage Buckets
Log In
Sign Up
Seyomi
/
synthguard-kmer
like
0
Seyomi/synthscreen-dataset
English
biosecurity
dna
protein
lightgbm
kmer
sequence-classification
synthguard
codon-usage
License:
apache-2.0
Model card
Files
Files and versions
xet
Community
main
synthguard-kmer
13.4 MB
Ctrl+K
Ctrl+K
1 contributor
History:
16 commits
Seyomi
Update model card: verified April 26 2026 blastn benchmarks, correct 5533 features, real OOD results
812e049
verified
22 days ago
.gitattributes
Safe
1.52 kB
initial commit
24 days ago
README.md
Safe
17.7 kB
Update model card: verified April 26 2026 blastn benchmarks, correct 5533 features, real OOD results
22 days ago
general_model.pkl
pickle
Detected Pickle imports (12)
"numpy._core.multiarray.scalar"
,
"numpy.ndarray"
,
"sklearn.calibration._SigmoidCalibration"
,
"sklearn.preprocessing._label.LabelEncoder"
,
"lightgbm.sklearn.LGBMClassifier"
,
"collections.OrderedDict"
,
"lightgbm.basic.Booster"
,
"collections.defaultdict"
,
"sklearn.calibration._CalibratedClassifier"
,
"numpy._core.multiarray._reconstruct"
,
"sklearn.calibration.CalibratedClassifierCV"
,
"numpy.dtype"
How to fix it?
2.58 MB
xet
v4 final: recall=91.8%, short-seq=79.7%, AUROC=0.977
24 days ago
meta.json
Safe
92.3 kB
v2: add codon-usage normalization features (RSCU+CAI+AA)
24 days ago
protein_kmer_model.pkl
pickle
Detected Pickle imports (9)
"lightgbm.basic.Booster"
,
"lightgbm.sklearn.LGBMClassifier"
,
"numpy.ndarray"
,
"numpy.dtype"
,
"collections.defaultdict"
,
"numpy._core.multiarray._reconstruct"
,
"collections.OrderedDict"
,
"numpy._core.multiarray.scalar"
,
"sklearn.preprocessing._label.LabelEncoder"
How to fix it?
2.78 MB
xet
Retrain protein k-mer with ProteinMPNN variants; holdout BoNT+Diphtheria
23 days ago
protein_kmer_v3_esm2.pkl
pickle
Detected Pickle imports (9)
"numpy._core.multiarray.scalar"
,
"numpy.dtype"
,
"numpy._core.multiarray._reconstruct"
,
"sklearn.preprocessing._label.LabelEncoder"
,
"collections.defaultdict"
,
"collections.OrderedDict"
,
"numpy.ndarray"
,
"lightgbm.sklearn.LGBMClassifier"
,
"lightgbm.basic.Booster"
How to fix it?
3.65 MB
xet
Upload protein_kmer_v3_esm2.pkl with huggingface_hub
23 days ago
protein_kmer_v4_esm2.pkl
pickle
Detected Pickle imports (9)
"collections.defaultdict"
,
"numpy.dtype"
,
"lightgbm.sklearn.LGBMClassifier"
,
"numpy.ndarray"
,
"lightgbm.basic.Booster"
,
"numpy._core.multiarray._reconstruct"
,
"sklearn.preprocessing._label.LabelEncoder"
,
"collections.OrderedDict"
,
"numpy._core.multiarray.scalar"
How to fix it?
3.25 MB
xet
Upload protein_kmer_v4_esm2.pkl with huggingface_hub
23 days ago
short_model.pkl
pickle
Detected Pickle imports (12)
"collections.defaultdict"
,
"sklearn.calibration.CalibratedClassifierCV"
,
"sklearn.calibration._SigmoidCalibration"
,
"lightgbm.basic.Booster"
,
"numpy._core.multiarray._reconstruct"
,
"collections.OrderedDict"
,
"sklearn.preprocessing._label.LabelEncoder"
,
"numpy.ndarray"
,
"sklearn.calibration._CalibratedClassifier"
,
"lightgbm.sklearn.LGBMClassifier"
,
"numpy.dtype"
,
"numpy._core.multiarray.scalar"
How to fix it?
1.06 MB
xet
v4 final: recall=91.8%, short-seq=79.7%, AUROC=0.977
24 days ago
