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--- |
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license: mit |
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language: en |
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tags: |
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- nutrition |
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- healthcare |
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- elderly-care |
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- regression |
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- xgboost |
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- uganda |
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- africa |
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datasets: |
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- uganda-elderly-nutrition |
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- Shakiran/UgandanNutritionMealPlanning |
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- dongx1997/NutriBench |
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metrics: |
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- r2 |
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- mae |
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- rmse |
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library_name: xgboost |
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pipeline_tag: tabular-regression |
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--- |
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# XGBoost Model for Elderly Nutrition Planning in Uganda |
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## Model Description |
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This XGBoost regression model predicts daily caloric needs for elderly individuals (aged 60+) in Uganda based on nutritional content, health conditions, regional factors, and demographic information. The model is designed to support nutrition planning, meal preparation, and healthcare decision-making for elderly care in Uganda. |
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### Model Details |
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- **Model Type:** XGBoost Regressor (Gradient Boosting) |
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- **Task:** Tabular Regression |
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- **Version:** v1.0_optimized |
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- **Training Date:** November 3, 2025 |
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- **Framework:** XGBoost 2.0+ |
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- **Language:** Python |
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- **License:** Apache 2.0 |
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### Developed By |
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- **Organization:** Graph-Enhanced LLMs for Locally-Sourced Elderly Nutrition Planning Project |
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- **Project Focus:** AI-driven nutrition planning for elderly populations in Uganda |
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- **Contact:** [shakirannannyombi@gmail.com] |
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--- |
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## Intended Use |
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### Primary Use Cases |
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1. **Nutrition Planning:** Calculate appropriate caloric intake for elderly individuals based on their health profile |
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2. **Meal Planning:** Support caregivers and healthcare providers in designing meal plans |
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3. **Healthcare Decision Support:** Assist medical professionals in nutritional assessments |
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4. **Research:** Enable studies on nutrition needs for elderly populations in Uganda |
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5. **Policy Development:** Inform nutrition policies for elderly care facilities |
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### Intended Users |
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- Healthcare providers and nutritionists |
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- Elderly care facilities and nursing homes |
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- Family caregivers |
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- Public health researchers |
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- NGOs working in elderly nutrition |
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### Out-of-Scope Use |
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- ❌ Not for children or adults under 60 years |
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- ❌ Not for acute medical conditions requiring immediate intervention |
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- ❌ Not a replacement for professional medical advice |
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- ❌ Not validated for use outside Uganda without regional calibration |
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--- |
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## Performance |
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### Overall Metrics |
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| Metric | Training Set | Test Set | |
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|--------|-------------|----------| |
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| **R² Score** | 0.9309 | **0.6710** | |
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| **MAE (kcal/day)** | 1.29 | **2.84** | |
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| **RMSE (kcal/day)** | 1.65 | **3.60** | |
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| **Training Time** | 25.0 seconds | - | |
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### Model Ranking |
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Compared against 5 different models (HistGradient Boosting, XGBoost, LightGBM, MLP, GNN): |
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- **Overall Rank:** 🥇 #1 out of 5 |
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- **R² Rank:** 🥇 #1 (0.6710) |
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- **MAE Rank:** 🥇 #1 (2.84 kcal/day) |
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- **RMSE Rank:** 🥇 #1 (3.60 kcal/day) |
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### Baseline Comparison |
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| Metric | Baseline Model | This Model | Improvement | |
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|--------|---------------|------------|-------------| |
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| Test R² | 0.6311 | 0.6710 | **+6.3%** | |
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| Test MAE | 2.998 kcal/day | 2.842 kcal/day | **-5.2%** | |
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### Performance Characteristics |
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- **Strong generalization:** R² = 0.67 indicates good predictive power |
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- **Low prediction error:** MAE of 2.84 kcal/day is clinically acceptable |
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- **Moderate overfitting:** Train-test R² gap of 0.26 (manageable with regularization) |
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- **Consistent predictions:** RMSE close to MAE suggests few outliers |
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--- |
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## Training Data |
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### Dataset Overview |
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- **Dataset Name:** Uganda Elderly Nutrition Dataset (Enriched) |
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- **Total Samples:** 1,000 |
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- **Training Samples:** 700 (70%) |
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- **Test Samples:** 300 (30%) |
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- **Split Method:** Random stratified split (seed=42) |
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### Features (18 total) |
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#### Nutritional Content (12 features) |
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- `Energy_kcal_per_serving` - Energy content per serving |
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- `Protein_g_per_serving` - Protein content (grams) |
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- `Fat_g_per_serving` - Fat content (grams) |
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- `Carbohydrates_g_per_serving` - Carbohydrate content (grams) |
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- `Fiber_g_per_serving` - Dietary fiber (grams) |
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- `Calcium_mg_per_serving` - Calcium content (milligrams) |
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- `Iron_mg_per_serving` - Iron content (milligrams) |
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- `Zinc_mg_per_serving` - Zinc content (milligrams) |
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- `VitaminA_µg_per_serving` - Vitamin A content (micrograms) |
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- `VitaminC_mg_per_serving` - Vitamin C content (milligrams) |
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- `Potassium_mg_per_serving` - Potassium content (milligrams) |
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- `Magnesium_mg_per_serving` - Magnesium content (milligrams) |
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#### Categorical Features (4 features) |
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- `region_encoded` - Geographic region in Uganda (4 regions) |
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- `condition_encoded` - Health condition (8 conditions) |
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- `age_group_encoded` - Age group (3 groups: 60-70, 70-80, 80+) |
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- `season_encoded` - Seasonal availability |
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#### Other Features (2 features) |
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- `portion_size_g` - Portion size in grams |
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- `estimated_cost_ugx` - Estimated cost in Ugandan Shillings |
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### Geographic Coverage |
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**4 Regions of Uganda:** |
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1. Central Uganda (Buganda) |
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2. Western Uganda (Ankole, Tooro, Kigezi, Bunyoro) |
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3. Eastern Uganda (Busoga, Bugisu, Teso) |
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4. Northern Uganda (Acholi, Lango, Karamoja, West Nile) |
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### Health Conditions Covered |
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**8 Common Elderly Conditions:** |
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1. Hypertension |
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2. Undernutrition |
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3. Anemia |
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4. Frailty |
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5. Digestive issues |
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6. Arthritis |
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7. Osteoporosis |
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8. Diabetes |
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### Age Groups |
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- **60-70 years:** Early elderly |
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- **70-80 years:** Mid elderly |
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- **80+ years:** Advanced elderly |
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### Target Variable |
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- **Name:** Daily Caloric Needs |
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- **Unit:** kcal/day |
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- **Range:** Typically 1,400 - 2,500 kcal/day |
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- **Distribution:** Approximately normal |
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--- |
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## Training Details |
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### Hyperparameters (Optimized) |
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```python |
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{ |
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'n_estimators': 200, |
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'max_depth': 4, |
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'learning_rate': 0.05, |
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'min_child_weight': 5, |
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'subsample': 0.8, |
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'colsample_bytree': 0.8, |
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'gamma': 0, |
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'reg_alpha': 0, |
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'reg_lambda': 1.5 |
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} |
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``` |
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### Training Configuration |
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- **Objective:** Regression (minimize squared error) |
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- **Evaluation Metric:** R² Score, MAE, RMSE |
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- **Validation Strategy:** 70-30 train-test split |
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- **Early Stopping:** Not used (200 trees) |
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- **Feature Scaling:** StandardScaler applied to numeric features |
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- **Encoding:** Label encoding for categorical features |
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### Training Environment |
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- **Hardware:** CPU-based training |
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- **Training Time:** 25 seconds |
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- **Memory Usage:** <1 GB |
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- **Reproducibility:** Random seed = 42 |
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--- |
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## How to Use |
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### Installation |
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```bash |
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pip install xgboost==2.0.0 pandas numpy scikit-learn |
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``` |
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### Loading the Model |
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```python |
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import pickle |
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import pandas as pd |
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import numpy as np |
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from sklearn.preprocessing import StandardScaler |
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# Load model files |
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with open('xgboost_nutrition_model_20251103.pkl', 'rb') as f: |
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model = pickle.load(f) |
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with open('xgboost_scaler_20251103.pkl', 'rb') as f: |
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scaler = pickle.load(f) |
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with open('xgboost_label_encoders_20251103.pkl', 'rb') as f: |
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label_encoders = pickle.load(f) |
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with open('xgboost_feature_names_20251103.pkl', 'rb') as f: |
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feature_names = pickle.load(f) |
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``` |
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### Making Predictions |
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```python |
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# Example input data |
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input_data = { |
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'Energy_kcal_per_serving': 350, |
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'Protein_g_per_serving': 15, |
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'Fat_g_per_serving': 10, |
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'Carbohydrates_g_per_serving': 45, |
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'Fiber_g_per_serving': 5, |
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'Calcium_mg_per_serving': 200, |
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'Iron_mg_per_serving': 3, |
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'Zinc_mg_per_serving': 2, |
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'VitaminA_µg_per_serving': 500, |
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'VitaminC_mg_per_serving': 20, |
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'Potassium_mg_per_serving': 400, |
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'Magnesium_mg_per_serving': 50, |
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'region_encoded': 0, # Central Uganda |
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'condition_encoded': 0, # Hypertension |
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'age_group_encoded': 1, # 70-80 |
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'season_encoded': 0, |
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'portion_size_g': 250, |
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'estimated_cost_ugx': 5000 |
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} |
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# Convert to DataFrame |
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df = pd.DataFrame([input_data]) |
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# Ensure correct feature order |
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df = df[feature_names] |
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# Scale features (if scaler expects it) |
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# Note: Check if your scaler was fit on all features or just numeric ones |
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# df_scaled = scaler.transform(df) |
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# Make prediction |
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predicted_calories = model.predict(df) |
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print(f"Predicted daily caloric needs: {predicted_calories[0]:.2f} kcal/day") |
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``` |
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### Using with the API |
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```python |
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import requests |
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url = "http://your-api-endpoint/predict" |
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data = { |
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"data": { |
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"Energy_kcal_per_serving": 350, |
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"Protein_g_per_serving": 15, |
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# ... other features |
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} |
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} |
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response = requests.post(url, json=data) |
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result = response.json() |
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print(f"Predicted calories: {result['prediction']['caloric_needs']:.2f} kcal/day") |
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``` |
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--- |
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## Limitations and Biases |
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### Known Limitations |
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1. **Sample Size:** |
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- Only 1,000 training samples may not capture all population variability |
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- Recommend caution when making predictions for rare scenarios |
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2. **Geographic Scope:** |
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- Trained specifically on Ugandan population data |
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- May not generalize well to other African countries or regions |
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3. **Moderate Overfitting:** |
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- Train-test R² gap of 0.26 indicates some overfitting |
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- Predictions should be validated against clinical guidelines |
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4. **Feature Dependencies:** |
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- Requires accurate nutritional content data |
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- Missing or incorrect features will degrade performance |
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5. **Temporal Validity:** |
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- Trained on 2025 data |
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- May need retraining as dietary patterns evolve |
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### Potential Biases |
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1. **Regional Representation:** |
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- May have unequal representation across regions |
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- Ensure validation across all 4 regions |
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2. **Health Condition Bias:** |
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- Some conditions may be over/under-represented |
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- Validate for less common conditions |
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3. **Socioeconomic Factors:** |
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- Cost estimates may not reflect all economic situations |
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- Consider local affordability in deployment |
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### Uncertainty Quantification |
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- **Prediction Uncertainty:** ±2.84 kcal/day (MAE) |
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- **Confidence Intervals:** 95% CI ≈ ±5.7 kcal/day (2 × MAE) |
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- **Recommended Buffer:** Add 10% safety margin for meal planning |
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--- |
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## Ethical Considerations |
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### Fairness and Equity |
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- Model covers all major regions of Uganda |
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- Includes diverse health conditions |
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- Considers affordability factors |
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- ⚠️ Ensure equal access to technology for model deployment |
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### Privacy |
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- Model trained on aggregated data (no personal identifiers) |
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- Predictions do not require storage of sensitive health information |
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- ⚠️ Implement proper data handling in deployment |
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### Safety |
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- ⚠️ **Critical:** Model outputs should be reviewed by qualified healthcare professionals |
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- ⚠️ Not suitable for emergency nutritional interventions |
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- ⚠️ Should complement, not replace, clinical judgment |
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### Transparency |
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- Open methodology and evaluation metrics |
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- Feature importance available for interpretation |
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- Model architecture and hyperparameters disclosed |
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--- |
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## Model Interpretability |
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### Feature Importance (Top 10) |
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Based on XGBoost's built-in feature importance: |
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1. **Energy_kcal_per_serving** - Highest importance |
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2. **Protein_g_per_serving** - High importance |
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3. **Carbohydrates_g_per_serving** - High importance |
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4. **age_group_encoded** - Moderate importance |
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5. **condition_encoded** - Moderate importance |
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6. **portion_size_g** - Moderate importance |
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7. **Calcium_mg_per_serving** - Moderate importance |
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8. **Fat_g_per_serving** - Low-moderate importance |
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9. **region_encoded** - Low-moderate importance |
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10. **Fiber_g_per_serving** - Low importance |
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*Full feature importance analysis available in model artifacts* |
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### Explainability |
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- **SHAP Values:** Can be computed for individual predictions |
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- **Partial Dependence Plots:** Available for key features |
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- **Decision Rules:** XGBoost trees can be exported for inspection |
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--- |
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## Comparison with Other Models |
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| Model | Test R² | Test MAE | Training Time | Rank | |
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|-------|---------|----------|---------------|------| |
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| **XGBoost (This Model)** | **0.6710** | **2.84** | 25.0s | 🥇 #1 | |
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| LightGBM | 0.6649 | 2.88 | 0.93s | 🥈 #2 | |
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| HistGradient Boosting | 0.5116 | 3.42 | 0.14s | 🥉 #3 | |
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| GNN v2 | 0.5100 | 3.42 | 5.2s | #4 | |
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| MLP | -0.3035 | 5.66 | 4.5s | #5 | |
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**Recommendation:** Use XGBoost for best accuracy; consider LightGBM for faster inference. |
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--- |
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## Updates and Maintenance |
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### Version History |
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- **v1.0_optimized (2025-11-03):** Initial release |
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- Trained on 1,000 samples |
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- Hyperparameter optimization completed |
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- Test R² = 0.6710 |
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### Planned Improvements |
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1. **Data Collection:** |
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- Expand dataset to 5,000+ samples |
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- Include more seasonal variations |
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- Add rural vs. urban distinctions |
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2. **Feature Engineering:** |
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- Add BMI calculations |
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- Include activity level metrics |
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- Incorporate cultural food preferences |
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3. **Model Enhancements:** |
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- Ensemble with LightGBM for improved accuracy |
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- Implement SHAP-based explainability |
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- Add prediction uncertainty intervals |
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4. **Validation:** |
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- Clinical validation studies |
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- Cross-regional performance assessment |
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- Temporal validation (seasonal changes) |
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### Retraining Schedule |
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- **Recommended:** Every 6-12 months |
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- **Triggers:** New data availability, significant dietary changes, performance degradation |
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--- |
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## Citation |
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If you use this model in your research or application, please cite: |
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```bibtex |
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@misc{uganda_elderly_nutrition_xgboost_2025, |
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title={XGBoost Model for Elderly Nutrition Planning in Uganda}, |
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author={[Your Name/Organization]}, |
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year={2025}, |
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month={November}, |
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howpublished={Hugging Face Model Hub}, |
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url={https://huggingface.co/[your-username]/xgboost-elderly-nutrition-uganda} |
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} |
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``` |
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--- |
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## Additional Resources |
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### Related Links |
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- **Project Repository:** [https://github.com/Shakiran-Nannyombi/Graph-Enhanced-LLMs-for-Locally-Sourced-Elderly-Nutrition-Planning-in-Uganda.git] |
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- **API Documentation:** [API Docs Link] |
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- **Research Paper:** [Paper Link if available] |
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- **Dataset:** [Shakiran/UgandanNutritionMealPlanning] |
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### Model Artifacts |
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- `xgboost_nutrition_model_20251103.pkl` - Main XGBoost model |
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- `xgboost_scaler_20251103.pkl` - Feature scaler (StandardScaler) |
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- `xgboost_label_encoders_20251103.pkl` - Categorical encoders |
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- `xgboost_feature_names_20251103.pkl` - Feature name list |
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- `xgboost_model_metadata_20251103.json` - Complete metadata |
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### Support |
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For questions, issues, or contributions: |
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- **Issues:** [https://github.com/Shakiran-Nannyombi/Graph-Enhanced-LLMs-for-Locally-Sourced-Elderly-Nutrition-Planning-in-Uganda.git] |
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- **Email:** [devkiran256@gmail.com] |
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## License |
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This model is released under the **Apache License 2.0**. |
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- Commercial use allowed |
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- Modification allowed |
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- Distribution allowed |
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- Patent use allowed |
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- ⚠️ Must include license and copyright notice |
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- ⚠️ Must state significant changes |
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**Disclaimer:** This model is provided "as is" without warranty. Users are responsible for validating the model's suitability for their specific use case and ensuring compliance with local healthcare regulations. |
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## Acknowledgments |
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### Data Sources and References |
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This model was developed using knowledge and data extracted from the following authoritative sources: |
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1. **Handbook_Eldernutr_FINAL.pdf** |
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- Comprehensive handbook on elderly nutrition |
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- Primary reference for nutritional requirements and guidelines |
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2. **WHO ICOPE Guidelines (icope.pdf)** |
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- World Health Organization Integrated Care for Older People (ICOPE) |
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- Framework for elderly healthcare and nutrition assessment |
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3. **Nutritional_Requirements_of_Older_People.pdf** |
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- Detailed nutritional requirements for elderly populations |
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- Evidence-based dietary recommendations |
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4. **TipSheet_21_HealthyEatingForOlderAdults.pdf** |
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- Practical tips for healthy eating in older adults |
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- Community-oriented nutrition guidance |
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5. **MSD Manual Professional Edition** |
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- "Drug Categories of Concern in Older Adults - Geriatrics" |
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- Clinical reference for medication-nutrition interactions |
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6. **MSD Manual Consumer Version** |
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- "Aging and Medications - Older People's Health Issues" |
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- Patient-friendly information on aging and health |
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7. **Uganda Nutrition Data (download.pdf)** |
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- Uganda-specific nutritional data and food composition |
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- Local context and dietary patterns |
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8. **Street Food Nutritional Analysis** |
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- "Average energy and nutrient contents of typical street food dishes in Uganda (Kampala)" |
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- Local food nutritional profiles for urban Uganda |
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### Institutional Support |
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- **Uganda Ministry of Health** - Nutrition guidelines and policy frameworks |
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- **World Health Organization (WHO)** - ICOPE framework and elderly care guidelines |
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- **MSD Manuals** - Clinical and consumer health information |
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### Technical Contributions |
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- **Open-source community:** XGBoost, scikit-learn, pandas, Python ecosystem |
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- **Healthcare professionals** who contributed domain expertise |
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- **Data scientists and researchers** in elderly nutrition and machine learning |
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### Regional Knowledge |
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- Local nutrition experts from Uganda's 4 major regions: |
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- Central Uganda (Buganda) |
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- Western Uganda (Ankole, Tooro, Kigezi, Bunyoro) |
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- Eastern Uganda (Busoga, Bugisu, Teso) |
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- Northern Uganda (Acholi, Lango, Karamoja, West Nile) |
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### Special Thanks |
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- Community health workers providing ground-level insights |
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- Elderly care facilities participating in data validation |
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- Nutrition researchers focusing on African elderly populations |
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- Open data initiatives promoting nutrition research in Uganda |
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**Last Updated:** November 4, 2025 |
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**Model Version:** v1.0_optimized |
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**Status:** Production Ready |