R3PM-Net / tools /predator_registration_and_evaluation.py
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import copy
import time
from dataclasses import dataclass
from pathlib import Path
from typing import Optional, Tuple
import numpy as np
import open3d as o3d
import torch
try:
from easydict import EasyDict as edict # type: ignore
except Exception: # pragma: no cover
class edict(dict):
"""Minimal EasyDict fallback (dot access)."""
def __getattr__(self, k):
try:
return self[k]
except KeyError as e:
raise AttributeError(k) from e
def __setattr__(self, k, v):
self[k] = v
from tools import metrics
from r3pm_net.config_loader import get_method_paths
@dataclass
class _PredatorRunner:
predator_root: Path
config_path: Path
weights_path: Path
device: torch.device
config: edict
model: torch.nn.Module
neighborhood_limits: np.ndarray
input_num_points: int
_RUNNER: Optional[_PredatorRunner] = None
_METHOD_CFG = get_method_paths().get("predator", {})
def _build_kpconv_architecture(num_layers: int) -> list:
# Mirrors the logic used in `master_thesis/OverlapPredator/scripts/demo.py`.
arch = ["simple", "resnetb"]
for _ in range(num_layers - 1):
arch += ["resnetb_strided", "resnetb", "resnetb"]
for _ in range(num_layers - 2):
arch += ["nearest_upsample", "unary"]
arch += ["nearest_upsample", "last_unary"]
return arch
def _get_predator_architecture(cfg_in: edict) -> list:
"""
OverlapPredator defines dataset-specific architectures in `configs/models.py`.
We try to use that (it must match the released checkpoints), and fall back to
the demo-style architecture builder if unavailable.
"""
try:
from configs.models import architectures as arch_dict # type: ignore
dataset_name = getattr(cfg_in, "dataset", None)
if dataset_name in arch_dict:
return arch_dict[dataset_name]
except Exception:
pass
return _build_kpconv_architecture(int(getattr(cfg_in, "num_layers", 3)))
def _resolve_path(predator_root: Path, p: str | Path) -> Path:
p = Path(p)
return p if p.is_absolute() else (predator_root / p)
def _maybe_downsample_xyz(xyz: np.ndarray, max_points: int) -> np.ndarray:
if max_points <= 0 or xyz.shape[0] <= max_points:
return xyz
idx = np.random.permutation(xyz.shape[0])[:max_points]
return xyz[idx]
def _to_o3d_feature(desc: np.ndarray) -> "o3d.pipelines.registration.Feature":
feat = o3d.pipelines.registration.Feature()
feat.data = np.asarray(desc, dtype=np.float32).T # (C, N)
return feat
def _ransac_pose_estimation(
src_xyz: np.ndarray,
tgt_xyz: np.ndarray,
src_desc: np.ndarray,
tgt_desc: np.ndarray,
*,
distance_threshold: float = 0.05,
ransac_n: int = 3,
mutual: bool = False,
) -> np.ndarray:
src_pcd = o3d.geometry.PointCloud(o3d.utility.Vector3dVector(src_xyz))
tgt_pcd = o3d.geometry.PointCloud(o3d.utility.Vector3dVector(tgt_xyz))
src_feat = _to_o3d_feature(src_desc)
tgt_feat = _to_o3d_feature(tgt_desc)
estimation = o3d.pipelines.registration.TransformationEstimationPointToPoint(False)
checkers = [
o3d.pipelines.registration.CorrespondenceCheckerBasedOnEdgeLength(0.9),
o3d.pipelines.registration.CorrespondenceCheckerBasedOnDistance(distance_threshold),
]
criteria = o3d.pipelines.registration.RANSACConvergenceCriteria(50000, 1000)
# Open3D signature varies slightly by version; support both.
try:
result = o3d.pipelines.registration.registration_ransac_based_on_feature_matching(
src_pcd,
tgt_pcd,
src_feat,
tgt_feat,
mutual,
distance_threshold,
estimation,
ransac_n,
checkers,
criteria,
)
except TypeError:
result = o3d.pipelines.registration.registration_ransac_based_on_feature_matching(
source=src_pcd,
target=tgt_pcd,
source_feature=src_feat,
target_feature=tgt_feat,
mutual_filter=mutual,
max_correspondence_distance=distance_threshold,
estimation_method=estimation,
ransac_n=ransac_n,
checkers=checkers,
criteria=criteria,
)
return np.asarray(result.transformation, dtype=np.float64)
def _init_runner(
predator_root: Path,
config_path: Path,
weights_path: Optional[Path],
*,
device: Optional[str | torch.device] = None,
input_num_points: Optional[int] = None,
calibrate_neighborhood_limits: bool = True,
) -> _PredatorRunner:
# Import OverlapPredator modules after adding it to sys.path.
import sys
if str(predator_root) not in sys.path:
sys.path.insert(0, str(predator_root))
from lib.utils import load_config
from datasets.my_dataloader import calibrate_neighbors, collate_fn_descriptor
from models.architectures import KPFCNN
cfg = edict(load_config(str(config_path)))
if device is None:
device_t = torch.device("cuda" if bool(cfg.gpu_mode) and torch.cuda.is_available() else "cpu")
else:
device_t = torch.device(device) if not isinstance(device, torch.device) else device
# Resolve weights path:
ckpt_path = _resolve_path(predator_root, weights_path) if weights_path else _resolve_path(predator_root, cfg.pretrain)
state = torch.load(str(ckpt_path), map_location=device_t)
state_dict = state["state_dict"] if isinstance(state, dict) and "state_dict" in state else state
def _try_build_and_load(cfg_in: edict) -> Optional[torch.nn.Module]:
cfg_in.device = device_t
cfg_in.architecture = _get_predator_architecture(cfg_in)
m = KPFCNN(cfg_in).to(device_t)
m.eval()
try:
m.load_state_dict(state_dict, strict=False)
except RuntimeError:
return None
return m
# First try the config as-is. If it fails (size mismatch), try common reduced widths.
cfg_candidates: list[edict] = []
cfg_candidates.append(cfg)
# Avoid duplicates while exploring smaller widths.
first_fd = int(getattr(cfg, "first_feats_dim", 0) or 0)
for cand in [first_fd // 2, 256, 128, 64]:
if cand and cand != first_fd:
c = edict(dict(cfg))
c.first_feats_dim = int(cand)
cfg_candidates.append(c)
model = None
chosen_cfg = None
for c in cfg_candidates:
m = _try_build_and_load(c)
if m is not None:
model = m
chosen_cfg = c
break
if model is None or chosen_cfg is None:
# Re-raise with a clear message.
raise RuntimeError(
f"Failed to load OverlapPredator weights at '{ckpt_path}'. "
f"Config '{config_path}' seems incompatible with checkpoint tensor shapes."
)
# Decide input sampling count (ModelNet config uses 1024).
if input_num_points is None:
input_num_points = int(getattr(cfg, "num_points", 1024))
if calibrate_neighborhood_limits:
# Calibrate neighbors once using a minimal one-sample dataset.
class _SinglePairDataset:
def __init__(self, config):
self.config = config
def __len__(self):
return 1
def __getitem__(self, _):
# Minimal valid sample to satisfy collate_fn_descriptor.
n = max(64, int(input_num_points))
src = np.random.randn(n, 3).astype(np.float32)
tgt = np.random.randn(n, 3).astype(np.float32)
src_feats = np.ones((n, 1), dtype=np.float32)
tgt_feats = np.ones((n, 1), dtype=np.float32)
rot = np.eye(3, dtype=np.float32)
trans = np.zeros((3, 1), dtype=np.float32)
matching_inds = torch.ones(1, 2).long()
sample = torch.ones(1)
gt = np.eye(4, dtype=np.float32)
return src, tgt, src_feats, tgt_feats, rot, trans, matching_inds, src, tgt, sample, gt
dummy_ds = _SinglePairDataset(chosen_cfg)
neighborhood_limits = calibrate_neighbors(dummy_ds, chosen_cfg, collate_fn=collate_fn_descriptor)
else:
# For tasks like parameter counting, we don't need KPConv neighborhood calibration.
# Pick a conservative default that works for typical KPConv configs.
n_layers = int(getattr(chosen_cfg, "num_layers", 5) or 5)
neighborhood_limits = np.asarray([256] * n_layers, dtype=np.int32)
return _PredatorRunner(
predator_root=predator_root,
config_path=config_path,
weights_path=ckpt_path,
device=device_t,
config=chosen_cfg,
model=model,
neighborhood_limits=neighborhood_limits,
input_num_points=int(input_num_points),
)
def predator_reg_and_eval(
source: "o3d.geometry.PointCloud",
target: "o3d.geometry.PointCloud",
*,
gt_transformation: Optional[np.ndarray] = None,
predator_root: str | Path = _METHOD_CFG.get("root", "/home/ykashefbahrami/master_thesis/OverlapPredator"),
config_path: str | Path = _METHOD_CFG.get("config_path", "/home/ykashefbahrami/master_thesis/OverlapPredator/configs/test/modelnet.yaml"),
weights_path: Optional[str | Path] = _METHOD_CFG.get("weights_path", None),
ransac_n_points: int = 1000,
ransac_distance_threshold: float = 0.05,
ransac_n: int = 3,
sampling: str = "prob",
mutual: bool = False,
device: Optional[str | torch.device] = None,
input_num_points: Optional[int] = 1024,
) -> Tuple["o3d.geometry.PointCloud", tuple]:
"""
Run OverlapPredator on a (source, target) pair and evaluate with the same
metric outputs as the Learning3D harness in this repo.
"""
global _RUNNER
predator_root_p = Path(predator_root).resolve()
config_path_p = Path(config_path).resolve()
weights_path_p = Path(weights_path).resolve() if weights_path is not None else None
if _RUNNER is None:
_RUNNER = _init_runner(
predator_root_p,
config_path_p,
weights_path_p,
device=device,
input_num_points=input_num_points,
)
# Import OverlapPredator collate after sys.path is set by _init_runner.
from datasets.my_dataloader import collate_fn_descriptor
src_xyz = np.asarray(source.points, dtype=np.float32)
tgt_xyz = np.asarray(target.points, dtype=np.float32)
src_xyz = _maybe_downsample_xyz(src_xyz, _RUNNER.input_num_points)
tgt_xyz = _maybe_downsample_xyz(tgt_xyz, _RUNNER.input_num_points)
src_feats = np.ones((src_xyz.shape[0], 1), dtype=np.float32)
tgt_feats = np.ones((tgt_xyz.shape[0], 1), dtype=np.float32)
rot = np.eye(3, dtype=np.float32)
trans = np.zeros((3, 1), dtype=np.float32)
matching_inds = torch.ones(1, 2).long()
sample = torch.ones(1)
gt = np.asarray(gt_transformation, dtype=np.float32) if gt_transformation is not None else np.eye(4, dtype=np.float32)
# Collate into KPConv batch format.
batch = collate_fn_descriptor(
[(src_xyz, tgt_xyz, src_feats, tgt_feats, rot, trans, matching_inds, src_xyz, tgt_xyz, sample, gt)],
config=_RUNNER.config,
neighborhood_limits=_RUNNER.neighborhood_limits,
)
# Move batch tensors to device.
for k, v in list(batch.items()):
if isinstance(v, list):
batch[k] = [t.to(_RUNNER.device) for t in v]
elif torch.is_tensor(v):
batch[k] = v.to(_RUNNER.device)
start = time.time()
with torch.no_grad():
feats, scores_overlap, scores_saliency = _RUNNER.model(batch)
feats = feats.detach().cpu()
scores_overlap = scores_overlap.detach().cpu()
scores_saliency = scores_saliency.detach().cpu()
pcd = batch["points"][0].detach().cpu()
len_src = int(batch["stack_lengths"][0][0].detach().cpu().item())
src_pcd = pcd[:len_src]
tgt_pcd = pcd[len_src:]
src_desc = feats[:len_src].numpy()
tgt_desc = feats[len_src:].numpy()
src_scores = (scores_overlap[:len_src] * scores_saliency[:len_src]).numpy().flatten()
tgt_scores = (scores_overlap[len_src:] * scores_saliency[len_src:]).numpy().flatten()
def _sample_idx(scores: np.ndarray, n: int) -> np.ndarray:
n_all = scores.shape[0]
if n_all <= n:
return np.arange(n_all)
if sampling == "topk":
return np.argsort(-scores)[:n]
if sampling == "random":
return np.random.permutation(n_all)[:n]
# prob
s = float(scores.sum())
if not np.isfinite(s) or s <= 0.0:
return np.random.permutation(n_all)[:n]
probs = scores / s
return np.random.choice(np.arange(n_all), size=n, replace=False, p=probs)
src_idx = _sample_idx(src_scores, ransac_n_points)
tgt_idx = _sample_idx(tgt_scores, ransac_n_points)
tsfm = _ransac_pose_estimation(
src_pcd[src_idx].numpy(),
tgt_pcd[tgt_idx].numpy(),
src_desc[src_idx],
tgt_desc[tgt_idx],
distance_threshold=ransac_distance_threshold,
ransac_n=ransac_n,
mutual=mutual,
)
end = time.time()
pc_result = copy.deepcopy(source).transform(tsfm)
eval_results = metrics.all_evaluations(
source,
target,
pc_result,
end - start,
gt_transformation=gt_transformation,
est_transformation=tsfm,
corres=None,
)
return pc_result, eval_results