| | --- |
| | license: apache-2.0 |
| | tags: |
| | - generated_from_trainer |
| | datasets: |
| | - pharmaconer |
| | metrics: |
| | - precision |
| | - recall |
| | - f1 |
| | - accuracy |
| | model-index: |
| | - name: pharmacoNER |
| | results: |
| | - task: |
| | name: Token Classification |
| | type: token-classification |
| | dataset: |
| | name: pharmaconer |
| | type: pharmaconer |
| | config: PharmaCoNER |
| | split: validation |
| | args: PharmaCoNER |
| | metrics: |
| | - name: Precision |
| | type: precision |
| | value: 0.9057634526085769 |
| | - name: Recall |
| | type: recall |
| | value: 0.9025585193249864 |
| | - name: F1 |
| | type: f1 |
| | value: 0.9041581458759373 |
| | - name: Accuracy |
| | type: accuracy |
| | value: 0.9948434782608696 |
| | --- |
| | |
| | <!-- This model card has been generated automatically according to the information the Trainer had access to. You |
| | should probably proofread and complete it, then remove this comment. --> |
| |
|
| | # pharmacoNER |
| |
|
| | This model is a fine-tuned version of [PlanTL-GOB-ES/bsc-bio-ehr-es](https://huggingface.co/PlanTL-GOB-ES/bsc-bio-ehr-es) on the pharmaconer dataset. |
| | It achieves the following results on the evaluation set: |
| | - Loss: 0.0251 |
| | - Precision: 0.9058 |
| | - Recall: 0.9026 |
| | - F1: 0.9042 |
| | - Accuracy: 0.9948 |
| |
|
| | ## Model description |
| |
|
| | More information needed |
| |
|
| | ## Intended uses & limitations |
| |
|
| | More information needed |
| |
|
| | ## Training and evaluation data |
| |
|
| | More information needed |
| |
|
| | ## Training procedure |
| |
|
| | ### Training hyperparameters |
| |
|
| | The following hyperparameters were used during training: |
| | - learning_rate: 2e-05 |
| | - train_batch_size: 8 |
| | - eval_batch_size: 8 |
| | - seed: 42 |
| | - optimizer: Adam with betas=(0.9,0.999) and epsilon=1e-08 |
| | - lr_scheduler_type: linear |
| | - num_epochs: 3 |
| |
|
| | ### Training results |
| |
|
| | | Training Loss | Epoch | Step | Validation Loss | Precision | Recall | F1 | Accuracy | |
| | |:-------------:|:-----:|:----:|:---------------:|:---------:|:------:|:------:|:--------:| |
| | | 0.0272 | 1.0 | 1017 | 0.0288 | 0.8047 | 0.8503 | 0.8269 | 0.9914 | |
| | | 0.0114 | 2.0 | 2034 | 0.0240 | 0.8950 | 0.8998 | 0.8974 | 0.9945 | |
| | | 0.006 | 3.0 | 3051 | 0.0251 | 0.9058 | 0.9026 | 0.9042 | 0.9948 | |
| |
|
| |
|
| | ### Framework versions |
| |
|
| | - Transformers 4.26.0 |
| | - Pytorch 1.13.1+cu116 |
| | - Datasets 2.9.0 |
| | - Tokenizers 0.13.2 |
| |
|
