Instructions to use ctheodoris/Geneformer with libraries, inference providers, notebooks, and local apps. Follow these links to get started.
- Libraries
- Transformers
How to use ctheodoris/Geneformer with Transformers:
# Use a pipeline as a high-level helper from transformers import pipeline pipe = pipeline("fill-mask", model="ctheodoris/Geneformer")# Load model directly from transformers import AutoTokenizer, AutoModelForMaskedLM tokenizer = AutoTokenizer.from_pretrained("ctheodoris/Geneformer") model = AutoModelForMaskedLM.from_pretrained("ctheodoris/Geneformer") - Inference
- Notebooks
- Google Colab
- Kaggle
| # Minimal makefile for Sphinx documentation | |
| # | |
| # You can set these variables from the command line, and also | |
| # from the environment for the first two. | |
| SPHINXOPTS ?= | |
| SPHINXBUILD ?= sphinx-build | |
| SOURCEDIR = source | |
| BUILDDIR = build | |
| # Put it first so that "make" without argument is like "make help". | |
| help: | |
| @$(SPHINXBUILD) -M help "$(SOURCEDIR)" "$(BUILDDIR)" $(SPHINXOPTS) $(O) | |
| # Catch-all target: route all unknown targets to Sphinx using the new | |
| # "make mode" option. $(O) is meant as a shortcut for $(SPHINXOPTS). | |
| %: Makefile | |
| @$(SPHINXBUILD) -M $@ "$(SOURCEDIR)" "$(BUILDDIR)" $(SPHINXOPTS) $(O) | |