ctheodoris
/

Geneformer

Model card Files Files and versions

Geneformer / geneformer

1.88 MB

Ctrl+K

Ctrl+K

20 contributors

History: 13 commits

David Wen

fix in silico perturber

f404882 almost 3 years ago

__init__.py

580 Bytes
add in silico perturbation module almost 3 years ago
collator_for_cell_classification.py

28.8 kB
Add data collator for cell classification and example for cell classification over 3 years ago
collator_for_gene_classification.py

28.1 kB
Add data collator for gene classification and example for gene classification over 3 years ago
gene_median_dictionary.pkl
Detected Pickle imports (2)
- "numpy.dtype",
- "numpy.core.multiarray.scalar"
How to fix it?
941 kB
Add Geneformer tokenizer and updated model card over 3 years ago
in_silico_perturber.py

38.2 kB
add in silico perturbation module almost 3 years ago
in_silico_perturber_stats.py

15 kB
fix in silico perturber almost 3 years ago
pretrainer.py

36.8 kB
add in silico perturbation module almost 3 years ago
token_dictionary.pkl
Detected Pickle imports (2)
- "numpy.core.multiarray.scalar",
- "numpy.dtype"
How to fix it?
788 kB
Update token_dictionary.pkl about 3 years ago
tokenizer.py

7.89 kB
Fix bug with metadata when processing multiple .loom files (#3) about 3 years ago