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Geneformer

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Geneformer / examples

1.52 MB

19 contributors

History: 38 commits

madhavanvenkatesh's picture

madhavanvenkatesh

Upload Multi-Task_cell_classification.ipynb

be21ec0 verified over 1 year ago

pretraining_new_model
precommit formatting over 1 year ago
Multi-Task_cell_classification.ipynb

12.4 kB

Upload Multi-Task_cell_classification.ipynb over 1 year ago
cell_classification.ipynb

106 kB

add option for hyperparameter tuning to cc.validate almost 2 years ago
extract_and_plot_cell_embeddings.ipynb

1.13 MB

Add classifier module and examples almost 2 years ago
gene_classification.ipynb

180 kB

Add classifier module and examples almost 2 years ago
in_silico_perturbation.ipynb

5.06 kB

Add functions for extracting gene embeddings, move state_embs_dict outside isp, fix bugs in isp about 2 years ago
tokenizing_scRNAseq_data.ipynb

4.01 kB

add input size tip to instructions over 1 year ago