psaegert's picture
Upload 201 files
2c34d2f
[0, 1, 2, 3, 4, 5, 6],
]
@classmethod
def Colors(cls):
"""Returns the list of colors.
"""
return cls.colors
@classmethod
def ColorGenerator(cls, n):
"""Returns an iterator of color strings.
n: how many colors will be used
"""
for i in cls.which_colors[n]:
yield cls.colors[i]
raise StopIteration('Ran out of colors in _Brewer.ColorGenerator')
@classmethod
def InitializeIter(cls, num):
"""Initializes the color iterator with the given number of colors."""
cls.color_iter = cls.ColorGenerator(num)
@classmethod
def ClearIter(cls):
"""Sets the color iterator to None."""
cls.color_iter = None
@classmethod
def GetIter(cls):
"""Gets the color iterator."""
if cls.color_iter is None:
cls.InitializeIter(7)
return cls.color_iter
def PrePlot(num=None, rows=None, cols=None):
"""Takes hints about what's coming.
num: number of lines that will be plotted
rows: number of rows of subplots
cols: number of columns of subplots
"""
if num:
_Brewer.InitializeIter(num)
if rows is None and cols is None:
return
if rows is not None and cols is None:
cols = 1
if cols is not None and rows is None:
rows = 1
# resize the image, depending on the number of rows and cols
size_map = {(1, 1): (8, 6),
(1, 2): (14, 6),
(1, 3): (14, 6),
(2, 2): (10, 10),
(2, 3): (16, 10),
(3, 1): (8, 10),
}
if (rows, cols) in size_map:
fig = pyplot.gcf()
fig.set_size_inches(*size_map[rows, cols])
# create the first subplot
if rows > 1 or cols > 1:
pyplot.subplot(rows, cols, 1)
global SUBPLOT_ROWS, SUBPLOT_COLS
SUBPLOT_ROWS = rows
SUBPLOT_COLS = cols
def SubPlot(plot_number, rows=None, cols=None):
"""Configures the number of subplots and changes the current plot.
rows: int
cols: int
plot_number: int
"""
rows = rows or SUBPLOT_ROWS
cols = cols or SUBPLOT_COLS
pyplot.subplot(rows, cols, plot_number)
def _Underride(d, **options):
"""Add key-value pairs to d only if key is not in d.
If d is None, create a new dictionary.
d: dictionary
options: keyword args to add to d
"""
if d is None:
d = {}
for key, val in options.items():
d.setdefault(key, val)
return d
def Clf():
"""Clears the figure and any hints that have been set."""
global LOC
LOC = None
_Brewer.ClearIter()
pyplot.clf()
fig = pyplot.gcf()
fig.set_size_inches(8, 6)
def Figure(**options):
"""Sets options for the current figure."""
_Underride(options, figsize=(6, 8))
pyplot.figure(**options)
def _UnderrideColor(options):
if 'color' in options:
return options
color_iter = _Brewer.GetIter()
if color_iter:
try:
options['color'] = next(color_iter)
except StopIteration:
# TODO: reconsider whether this should warn
# warnings.warn('Warning: Brewer ran out of colors.')
_Brewer.ClearIter()
return options
def Plot(obj, ys=None, style='', **options):
"""Plots a line.
Args:
obj: sequence of x values, or Series, or anything with Render()
ys: sequence of y values
style: style string passed along to pyplot.plot
options: keyword args passed to pyplot.plot
"""
options = _UnderrideColor(options)
label = getattr(obj, 'label', '_nolegend_')
options = _Underride(options, linewidth=3, alpha=0.8, label=label)
xs = obj
if ys is None:
if hasattr(obj, 'Render'):
xs, ys = obj.Render()
if isinstance(obj, pandas.Series):
ys = obj.values
xs = obj.index
if ys is None:
pyplot.plot(xs, style, **options)
else:
pyplot.plot(xs, ys, style, **options)
def FillBetween(xs, y1, y2=None, where=None, **options):
"""Plots a line.
Args:
xs: sequence of x values
y1: sequence of y values
y2: sequence of y values
where: sequence of boolean
options: keyword args passed to pyplot.fill_between
"""
options = _UnderrideColor(options)
options = _Underride(options, linewidth=0, alpha=0.5)
pyplot.fill_between(xs, y1, y2, where, **options)
def Bar(xs, ys, **options):
"""Plots a line.
Args:
xs: sequence of x values
ys: sequence of y values
options: keyword args passed to pyplot.bar
"""
options = _UnderrideColor(options)
options = _Underride(options, linewidth=0, alpha=0.6)
pyplot.bar(xs, ys, **options)
def Scatter(xs, ys=None, **options):
"""Makes a scatter plot.
xs: x values
ys: y values
options: options passed to pyplot.scatter
"""
options = _Underride(options, color='blue', alpha=0.2,
s=30, edgecolors='none')
if ys is None and isinstance(xs, pandas.Series):
ys = xs.values
xs = xs.index
pyplot.scatter(xs, ys, **options)
def HexBin(xs, ys, **options):
"""Makes a scatter plot.
xs: x values
ys: y values
options: options passed to pyplot.scatter
"""
options = _Underride(options, cmap=matplotlib.cm.Blues)
pyplot.hexbin(xs, ys, **options)
def Pdf(pdf, **options):
"""Plots a Pdf, Pmf, or Hist as a line.
Args:
pdf: Pdf, Pmf, or Hist object
options: keyword args passed to pyplot.plot
"""
low, high = options.pop('low', None), options.pop('high', None)
n = options.pop('n', 101)
xs, ps = pdf.Render(low=low, high=high, n=n)
options = _Underride(options, label=pdf.label)
Plot(xs, ps, **options)
def Pdfs(pdfs, **options):
"""Plots a sequence of PDFs.
Options are passed along for all PDFs. If you want different
options for each pdf, make multiple calls to Pdf.
Args:
pdfs: sequence of PDF objects
options: keyword args passed to pyplot.plot
"""
for pdf in pdfs:
Pdf(pdf, **options)
def Hist(hist, **options):
"""Plots a Pmf or Hist with a bar plot.
The default width of the bars is based on the minimum difference
between values in the Hist. If that's too small, you can override
it by providing a width keyword argument, in the same units
as the values.
Args:
hist: Hist or Pmf object
options: keyword args passed to pyplot.bar
"""
# find the minimum distance between adjacent values
xs, ys = hist.Render()
if 'width' not in options:
try:
options['width'] = 0.9 * np.diff(xs).min()
except TypeError:
warnings.warn("Hist: Can't compute bar width automatically."
"Check for non-numeric types in Hist."
"Or try providing width option."
)
options = _Underride(options, label=hist.label)
options = _Underride(options, align='center')
if options['align'] == 'left':
options['align'] = 'edge'
elif options['align'] == 'right':
options['align'] = 'edge'
options['width'] *= -1
Bar(xs, ys, **options)
def Hists(hists, **options):
"""Plots two histograms as interleaved bar plots.
Options are passed along for all PMFs. If you want different
options for each pmf, make multiple calls to Pmf.
Args:
hists: list of two Hist or Pmf objects
options: keyword args passed to pyplot.plot
"""
for hist in hists:
Hist(hist, **options)
def Pmf(pmf, **options):
"""Plots a Pmf or Hist as a line.
Args:
pmf: Hist or Pmf object
options: keyword args passed to pyplot.plot
"""
xs, ys = pmf.Render()
low, high = min(xs), max(xs)
width = options.pop('width', None)
if width is None:
try:
width = np.diff(xs).min()
except TypeError:
warnings.warn("Pmf: Can't compute bar width automatically."
"Check for non-numeric types in Pmf."