Datasets:

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AI4Immu

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Hi-TpH

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USTC-AI4Immu 2

Error code:   DatasetGenerationCastError
Exception:    DatasetGenerationCastError
Message:      An error occurred while generating the dataset

All the data files must have the same columns, but at some point there are 4 new columns ({'hla.full.seq', 'hla.short.seq', 'hla.clip.seq', 'hla.allele'})

This happened while the csv dataset builder was generating data using

hf://datasets/AI4Immu/Hi-TpH/Hi-TpH-level-II.csv (at revision bcf78391239d5779235db6689a0103c40890f252), [/tmp/hf-datasets-cache/medium/datasets/19527648152513-config-parquet-and-info-AI4Immu-Hi-TpH-a3d7d25a/hub/datasets--AI4Immu--Hi-TpH/snapshots/bcf78391239d5779235db6689a0103c40890f252/Hi-TpH-level-I.csv (origin=hf://datasets/AI4Immu/Hi-TpH@bcf78391239d5779235db6689a0103c40890f252/Hi-TpH-level-I.csv), /tmp/hf-datasets-cache/medium/datasets/19527648152513-config-parquet-and-info-AI4Immu-Hi-TpH-a3d7d25a/hub/datasets--AI4Immu--Hi-TpH/snapshots/bcf78391239d5779235db6689a0103c40890f252/Hi-TpH-level-II.csv (origin=hf://datasets/AI4Immu/Hi-TpH@bcf78391239d5779235db6689a0103c40890f252/Hi-TpH-level-II.csv), /tmp/hf-datasets-cache/medium/datasets/19527648152513-config-parquet-and-info-AI4Immu-Hi-TpH-a3d7d25a/hub/datasets--AI4Immu--Hi-TpH/snapshots/bcf78391239d5779235db6689a0103c40890f252/Hi-TpH-level-III.csv (origin=hf://datasets/AI4Immu/Hi-TpH@bcf78391239d5779235db6689a0103c40890f252/Hi-TpH-level-III.csv), /tmp/hf-datasets-cache/medium/datasets/19527648152513-config-parquet-and-info-AI4Immu-Hi-TpH-a3d7d25a/hub/datasets--AI4Immu--Hi-TpH/snapshots/bcf78391239d5779235db6689a0103c40890f252/Hi-TpH-level-IV.csv (origin=hf://datasets/AI4Immu/Hi-TpH@bcf78391239d5779235db6689a0103c40890f252/Hi-TpH-level-IV.csv), /tmp/hf-datasets-cache/medium/datasets/19527648152513-config-parquet-and-info-AI4Immu-Hi-TpH-a3d7d25a/hub/datasets--AI4Immu--Hi-TpH/snapshots/bcf78391239d5779235db6689a0103c40890f252/immrep2023_solutions.csv (origin=hf://datasets/AI4Immu/Hi-TpH@bcf78391239d5779235db6689a0103c40890f252/immrep2023_solutions.csv)]

Please either edit the data files to have matching columns, or separate them into different configurations (see docs at https://hf.co/docs/hub/datasets-manual-configuration#multiple-configurations)
Traceback:    Traceback (most recent call last):
                File "/usr/local/lib/python3.12/site-packages/datasets/builder.py", line 1890, in _prepare_split_single
                  writer.write_table(table)
                File "/usr/local/lib/python3.12/site-packages/datasets/arrow_writer.py", line 760, in write_table
                  pa_table = table_cast(pa_table, self._schema)
                             ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
                File "/usr/local/lib/python3.12/site-packages/datasets/table.py", line 2272, in table_cast
                  return cast_table_to_schema(table, schema)
                         ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
                File "/usr/local/lib/python3.12/site-packages/datasets/table.py", line 2218, in cast_table_to_schema
                  raise CastError(
              datasets.table.CastError: Couldn't cast
              antigen.epitope: string
              hla.allele: string
              beta.cdr3: string
              dataset.tag: string
              hla.full.seq: string
              hla.clip.seq: string
              hla.short.seq: string
              -- schema metadata --
              pandas: '{"index_columns": [{"kind": "range", "name": null, "start": 0, "' + 1127
              to
              {'antigen.epitope': Value('string'), 'beta.cdr3': Value('string'), 'dataset.tag': Value('string')}
              because column names don't match
              
              During handling of the above exception, another exception occurred:
              
              Traceback (most recent call last):
                File "/src/services/worker/src/worker/job_runners/config/parquet_and_info.py", line 1347, in compute_config_parquet_and_info_response
                  parquet_operations = convert_to_parquet(builder)
                                       ^^^^^^^^^^^^^^^^^^^^^^^^^^^
                File "/src/services/worker/src/worker/job_runners/config/parquet_and_info.py", line 980, in convert_to_parquet
                  builder.download_and_prepare(
                File "/usr/local/lib/python3.12/site-packages/datasets/builder.py", line 884, in download_and_prepare
                  self._download_and_prepare(
                File "/usr/local/lib/python3.12/site-packages/datasets/builder.py", line 947, in _download_and_prepare
                  self._prepare_split(split_generator, **prepare_split_kwargs)
                File "/usr/local/lib/python3.12/site-packages/datasets/builder.py", line 1739, in _prepare_split
                  for job_id, done, content in self._prepare_split_single(
                                               ^^^^^^^^^^^^^^^^^^^^^^^^^^^
                File "/usr/local/lib/python3.12/site-packages/datasets/builder.py", line 1892, in _prepare_split_single
                  raise DatasetGenerationCastError.from_cast_error(
              datasets.exceptions.DatasetGenerationCastError: An error occurred while generating the dataset
              
              All the data files must have the same columns, but at some point there are 4 new columns ({'hla.full.seq', 'hla.short.seq', 'hla.clip.seq', 'hla.allele'})
              
              This happened while the csv dataset builder was generating data using
              
              hf://datasets/AI4Immu/Hi-TpH/Hi-TpH-level-II.csv (at revision bcf78391239d5779235db6689a0103c40890f252), [/tmp/hf-datasets-cache/medium/datasets/19527648152513-config-parquet-and-info-AI4Immu-Hi-TpH-a3d7d25a/hub/datasets--AI4Immu--Hi-TpH/snapshots/bcf78391239d5779235db6689a0103c40890f252/Hi-TpH-level-I.csv (origin=hf://datasets/AI4Immu/Hi-TpH@bcf78391239d5779235db6689a0103c40890f252/Hi-TpH-level-I.csv), /tmp/hf-datasets-cache/medium/datasets/19527648152513-config-parquet-and-info-AI4Immu-Hi-TpH-a3d7d25a/hub/datasets--AI4Immu--Hi-TpH/snapshots/bcf78391239d5779235db6689a0103c40890f252/Hi-TpH-level-II.csv (origin=hf://datasets/AI4Immu/Hi-TpH@bcf78391239d5779235db6689a0103c40890f252/Hi-TpH-level-II.csv), /tmp/hf-datasets-cache/medium/datasets/19527648152513-config-parquet-and-info-AI4Immu-Hi-TpH-a3d7d25a/hub/datasets--AI4Immu--Hi-TpH/snapshots/bcf78391239d5779235db6689a0103c40890f252/Hi-TpH-level-III.csv (origin=hf://datasets/AI4Immu/Hi-TpH@bcf78391239d5779235db6689a0103c40890f252/Hi-TpH-level-III.csv), /tmp/hf-datasets-cache/medium/datasets/19527648152513-config-parquet-and-info-AI4Immu-Hi-TpH-a3d7d25a/hub/datasets--AI4Immu--Hi-TpH/snapshots/bcf78391239d5779235db6689a0103c40890f252/Hi-TpH-level-IV.csv (origin=hf://datasets/AI4Immu/Hi-TpH@bcf78391239d5779235db6689a0103c40890f252/Hi-TpH-level-IV.csv), /tmp/hf-datasets-cache/medium/datasets/19527648152513-config-parquet-and-info-AI4Immu-Hi-TpH-a3d7d25a/hub/datasets--AI4Immu--Hi-TpH/snapshots/bcf78391239d5779235db6689a0103c40890f252/immrep2023_solutions.csv (origin=hf://datasets/AI4Immu/Hi-TpH@bcf78391239d5779235db6689a0103c40890f252/immrep2023_solutions.csv)]
              
              Please either edit the data files to have matching columns, or separate them into different configurations (see docs at https://hf.co/docs/hub/datasets-manual-configuration#multiple-configurations)