File size: 10,332 Bytes
f53f2db
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
4368a3f
 
 
 
 
 
 
 
 
 
 
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
mutant_file_id,doi
1A3G_kcatkm57_alpha-Ketoglutarate,10.1021/acscatal.9b01464
1A6K_ee,doi.org/10.1002/anie.201608680
1BXZ_ee,doi.org/10.1002/cbic.201700562
1MLC_2_Kd-wtKd-mut,http://dx.doi.org/10.1038/nbt1336
1NWW_ee,doi.org/10.1021/jacs.7b10278
1XWW_activity,10.1371/journal.pone.0235133
1XWW_kcatkm,10.1371/journal.pone.0235133
1XWW_km,10.1371/journal.pone.0235133
1Z42_ee_1,doi.org/10.1002/adsc.200900644
1Z42_ee_2,doi.org/10.1002/adsc.200900644
1Z42_ee_3,doi.org/10.1002/adsc.200900644
2Q0Q_ee_1,doi.org/10.1021/acscatal.0c01767
2Q0Q_ee_2,doi.org/10.1021/acscatal.0c01767
2YLR_ee,doi.org/10.1021/ja5098034
3FCR_activity-substrate-1,10.1021/acscatal.4c00987
3FCR_activity-substrate-2,10.1021/acscatal.4c00987
3FCR_ee,10.1021/acscatal.4c00987
3WUY_ee,10.1002/anie.202012243
4DF2_ee,10.1021/cs500429k
4O98_kcat,10.1002/bit.26012
4O98_kcatkm,10.1002/bit.26012
4O98_km,10.1002/bit.26012
4OVI_ee_2,doi.org/10.1021/ja5098034
4OVI_ee_3,doi.org/10.1021/ja5098034
4OVI_ee_4_substreate_1a,doi.org/10.1021/ja5098034
4OVI_ee_4_substreate_4b,doi.org/10.1021/ja5098034
4OVI_ee_4_substreate_4c,doi.org/10.1021/ja5098034
4S2P_kcatkm,10.1038/s41929-024-01117-4
5A71_ee,doi.org/10.1021/jacs.9b02709
5A71_kcat,10.1038/s41467-019-11155-3
5A71_kcatkm,10.1038/s41467-019-11155-3
5A71_km,10.1038/s41467-019-11155-3
5T6M_km,10.1021/jacs.8b03490
5Z2X_ee,doi.org/10.1021/jacs.8b08640
6CUK_turnover_rate,10.1038/s41467-024-50698-y
6JXG_activity,10.1186/s13068-021-01973-3
7EMG_ee,10.1039/d1cc04542c
7LOO_activity,10.1021/acs.jafc.4c03715
7YVR_activity,doi.org/10.1021/acscatal.0c05607
7YVR_de,doi.org/10.1021/acscatal.0c05607
8IOZ_activity,10.1016/j.isci.2024.109034
A0A059TC02_activity,10.1105/tpc.114.127399
A0A0H2V871_DGE_activity,10.1021/bi060950i
A0A0H2V871_Ent_activity,10.1021/bi060950i
A0A0I9QGZ2_ee_1,doi.org/10.1039/c4cc08436e
A0A0I9QGZ2_ee_2,doi.org/10.1039/c4cc08436e
A0A0I9QGZ2_kcat,10.1002/anie.201701169
A0A0I9QGZ2_kcatkm,10.1002/anie.201701169
A0A0I9QGZ2_km,10.1002/anie.201701169
A0A0K8P6T7_activity,10.1002/cbic.201800097
A0A0K8P6T7_TPA_activity,10.1002/cbic.201800097
A0A0K8P6T7_yield,10.1002/cbic.201800097
A0A0K8P8E7_activity,10.1038/s41467-019-09326-3
A0A0P0ZBS7_activity,10.1007/s12033-015-9839-4
A0A7I6N400_ee,10.1021/acsomega.0c03070
A0MGZ7_substrate_VII_activity,10.1021/acschembio.6b00841
A0MGZ7_substrate_VI_activity,10.1021/acschembio.6b00841
A0MGZ7_substrate_V_activity,10.1021/acschembio.6b00841
A2QAN3_kcat,?10.1111/febs.14083
A2QAN3_kcatkm,?10.1111/febs.14083
A2RJT9_DCIP_activity,10.1074/jbc.M303767200
A2RJT9_oxygen_activity,10.1074/jbc.M303767200
A4QAA6_activity,doi/10.1021/acs.jafc.3c09589
A4XGA6_M5_Epimerization_activity,10.1016/j.ijbiomac.2019.11.015
A4XGA6_M5_Isomerization_activity,10.1016/j.ijbiomac.2019.11.015
AAD07447_1_activity_product_3-FL,10.1002/bit.25944
AAD07447_1_activity_product_Lex,10.1002/bit.25944
AAD07447_1_kcatkm_substrate_GDP,10.1002/bit.25944
AAD07447_1_kcatkm_substrate_lactose,10.1002/bit.25944
AAD07447_1_kcat_substrate_GDP,10.1002/bit.25944
AAD07447_1_kcat_substrate_lactose,10.1002/bit.25944
AAD07447_1_km_substrate_GDP,10.1002/bit.25944
AAD07447_1_km_substrate_lactose,10.1002/bit.25944
AB333782_activity,10.1016/j.enzmictec.2024.110481
ABS64560_1_activity,10.1007/s00253-015-6527-z
ACCO_ee,10.1038/s44160-024-00536-2
ACY56506_1_km,10.1128/AEM.01817-16
AGQ46835_1_kcat,10.1016/j.enzmictec.2015.12.012
AGQ46835_1_kcatkm,10.1016/j.enzmictec.2015.12.012
AGQ46835_1_km,10.1016/j.enzmictec.2015.12.012
AHW42593_1_activity,10.1016/j.enzmictec.2018.03.001
AHZ56660_1_kcat,10.1111/1751-7915.12168
AHZ56660_1_km,10.1111/1751-7915.12168
ALB07219_1_activity,10.1007/s00449-020-02393-7
ASG2_exp,10.1002/biot.202400347
BAA88830_1_activity,10.1186/s12934-020-01451-9
BAA_activity,10.1021/acs.jafc.4c05070
BsSDR10_R-R-R-2_de,10.1021/jacsau.4c00284
BsSDR10_R-S-S-2_de,10.1021/jacsau.4c00284
BsSDR10_S-R-R-2_de,10.1021/jacsau.4c00284
BsSDR10_S-S-S-2_de,10.1021/jacsau.4c00284
BsSDR10_S7_R-R-R-2_de,10.1021/jacsau.4c00284
BsSDR10_S7_R-S-S-2_de,10.1021/jacsau.4c00284
BsSDR10_S7_S-R-R-2_de,10.1021/jacsau.4c00284
BsSDR10_S7_S-S-S-2_de,10.1021/jacsau.4c00284
C6DAH4_activity,10.1002/cbic.201700609
CCA64021_1_activity,10.1007/s12010-019-03170-3
CQR83192_1_activity,10.1007/s10529-018-2607-3
CQR83192_1_kcat,10.1007/s10529-018-2607-3
D4Z2G1_activity,10.1021/bi026427v
E8RUP5_activity,10.1021/jacs.6b10389
EHK72968_1_ee,10.1016/j.bbrc.2015.11.038
EIJ78397_1_kcatkm,10.1021/acssynbio.8b00481
EU348855_E-value,10.3390/molecules29204864
GAP38373_1_relative_kcat,10.1002/cbic.202300373
I6XD65_NAM_activity,10.1111/j.1742-4658.2007.06241.x
I6XD65_PZA_activity,10.1111/j.1742-4658.2007.06241.x
KAL2709656_de,doi.org/10.1021/acscatal.0c05607
KdAKR_activity,10.1002/biot.202300637
KE07_kcat,10.1038/nature06879
KE70_kcatkm,10.1038/nature06879
KmAKR_variant_3_activity,10.1016/j.bioorg.2021.104712
MN539024_1_km,10.1111/1751-7915.13812
MT038422_1_activity_hydrolysis,10.1016/j.enzmictec.2020.109644
MT038422_1_activity_transpeptidation,10.1016/j.enzmictec.2020.109644
MT038422_1_kcat,10.1016/j.enzmictec.2020.109644
MT038422_1_kcatkm,10.1016/j.enzmictec.2020.109644
MT038422_1_km,10.1016/j.enzmictec.2020.109644
myoglobin_ee,http://dx.doi.org/10.1016/j.chempr.2024.06.010
nitrilase_ee,?10.1021/ja035742h
O06543_activity,10.1074/jbc.M409704200
O52063_activity,10.1371/journal.pone.0137700
O54728_activity,10.1021/bi010237n
O75355_ADPase_activity,10.1021/bi002711f
O75355_ATPase_activity,10.1021/bi002711f
O94220_activity,10.1016/j.fob.2013.10.009
P00813_activity,10.1096/fj.12-212621
P04517_exp,10.1016/j.jbiotec.2005.08.006
P05030_activity,10.1002/j.1460-2075.1988.tb03010.x
P05150_activity,10.1074/jbc.M300383200
P06802_activity,10.1074/jbc.M007552200
P08684_ee_1,doi.org/10.1002/cbic.201600546
P08684_ee_2,doi.org/10.1002/cbic.201600546
P0A2M9_kcatkm,10.1016/j.molcel.2007.11.011
P0A2M9_vmax,10.1016/j.molcel.2007.11.011
P0A873_vmax,10.1016/j.jmb.2003.09.011
P0A8I5_kcat,10.1002/prot.20454
P0ADG7_kcat,10.1021/bi9714161
P11509_kcat,10.1080/15287394.2014.951757
P11509_kcatkm,10.1080/15287394.2014.951757
P11509_kd,10.1080/15287394.2014.951757
P11509_km,10.1080/15287394.2014.951757
P14779_ee,10.1002/cbic.201200244
P14779_ee_2,10.1002/cbic.201200244
P14779_ee_3,10.1002/cbic.201200244
P15042_1_activity,10.1074/jbc.M111164200
P15042_2_activity,10.1074/jbc.M413685200
P22862_activity,10.1002/bit.27170
P24058_vmax,10.1074/jbc.M107465200
P25745_activity,10.1038/nature04896
P27346_activity_aKG,10.1021/acscatal.2c04636
P27346_activity_PBO,10.1021/acscatal.2c04636
P27346_activity_PPO,10.1021/acscatal.2c04636
P27346_activity_PTO,10.1021/acscatal.2c04636
P27346_PBO_kcat,10.1021/acscatal.2c04636
P27346_PBO_KcatKm,10.1021/acscatal.2c04636
P27346_PBO_Km,10.1021/acscatal.2c04636
P27346_PPO_kcat,10.1021/acscatal.2c04636
P27346_PPO_kcatkm_csv,10.1021/acscatal.2c04636
P27346_PPO_km,10.1021/acscatal.2c04636
P29379_ee,10.1002/bit.26484
P32738_kcat,10.1074/jbc.270.49.29111
P33018_kcatkm,10.1074/jbc.M600996200
P33018_vmax,10.1074/jbc.M600996200
P36136_kcat,10.1074/jbc.M110.118315
P36136_vmax,10.1074/jbc.M110.118315
P46544_activity,10.1016/s0167-4838(98)00264-7
P46849_activity,10.1016/j.str.2010.01.016
P49768_1_activity,10.1038/nature14892
P51697_activity,?10.1002/prot.10007
P52061_kcat,10.1016/j.jmb.2007.10.012
P56653_kcat,10.1021/bi0262303
P58004_kcat,10.1038/ncomms10025
P73574_activity,?10.1016/j.febslet.2015.09.001
P73832_activity,10.1016/j.jmb.2009.07.001
P77555_kcat,10.1371/journal.pone.0052066
P77555_kcatkm,10.1371/journal.pone.0052066
P78330_activity,10.1074/jbc.M204866200
P80036_activity,10.1271/bbb.65.1542
P95480_vmax,10.1002/anie.200802466
P95867_activity,10.1021/jf073320b
P9WHH9_DTNB_activity,10.1074/jbc.M507466200
P9WHH9_LDH_activity,10.1074/jbc.M507466200
P9WHH9_PDH_activity,10.1074/jbc.M507466200
Q02353_N_deacetylase_activity,10.1074/jbc.274.4.1966
Q02353_N_sulfotransferase_activity,10.1074/jbc.274.4.1966
Q02890_activity,10.1074/jbc.M111383200
Q03154_kcat,10.1074/jbc.M304233200
Q06135_activity,10.1074/jbc.M807990200
Q071N0_kcatkm,10.1074/jbc.M109.030957
Q14RS0_activity,10.1016/j.enzmictec.2015.07.009
Q16769_kcat,10.1073/pnas.0504184102
Q16774_kcat,10.1074/jbc.RA119.009251
Q2FHP2_activity,10.1038/s41467-019-13724-y
Q2FV54_activity,10.1074/jbc.RA120.013108
Q3YW59_activity,10.1038/nature13618
Q44244_NSAR_kcat,10.1021/bi500573v
Q44244_OSBS_kcat,10.1021/bi500573v
Q47NX5_km,10.1128/AEM.01224-18
Q4KAC6_kcat,10.1016/j.enzmictec.2019.01.002
Q4KAC6_kcatkm,10.1016/j.enzmictec.2019.01.002
Q4KAC6_km,10.1016/j.enzmictec.2019.01.002
Q51559_activity,10.1111/febs.14954
Q57261_activity,10.1016/j.abb.2009.07.023
Q58431_activity,10.1021/bi0484769
Q597B8_activity,10.1016/j.ijbiomac.2024.132084
Q5F4D9_ee,10.1002/anie.201311091
Q65EX3_activity,10.1073/pnas.1019480108
Q6VAB4_kcatkm,10.1073/pnas.1902104116
Q70PR7_activity,?10.1016/j.bmc.2004.02.029
Q7SIG4_activity,10.1021/bi0500675
Q86GC8_activity,10.1016/j.scitotenv.2024.173282
Q86XE5_kcat,10.1371/journal.pone.0026021
Q887Q3_activity,10.1074/jbc.M113.533158
Q88LS1_activity,10.1128/mBio.01412-17
Q8GCH2_kcat,?10.1074/jbc.M801227200
Q8IYT2_activity,10.1038/ncomms4004
Q8JFY9_activity,10.1074/jbc.M501160200
Q8KLM3_activity,10.1074/jbc.M611912200
Q8LPL7_activity,?10.1093/nar/gkz070
QNC43959_1_kcatkm_substrate_R,10.1038/nature06879
QNC43959_1_kcatkm_substrate_S,10.1038/nature06879
QNC43959_1_kcat_substrate_R,10.1038/nature06879
QNC43959_1_kcat_substrate_S,10.1038/nature06879
QNC43959_1_ratio_of_kcatkm_R_over_S,10.1038/nature06879
S5Y0Y3_residual_activity,10.1016/j.bbrc.2020.12.039
S5Y0Y3_turn_over_frequency,10.1016/j.bbrc.2020.12.039
Tr_Cel7B_activity,10.1021/ci500339v
WLF46330_1_kcat_disulfide_bonds,10.1002/bit.28808
WP_012492804_activity,doi.org/10.1128/AEM.02688-15
WP_012492804_ee,doi.org/10.1128/AEM.02688-15
firprotdb**,10.1093/nar/gkaa981
M1261**,10.1038/s43588-024-00716-2
thermomutdb**,10.1093/nar/gkaa925
Q306**,10.1093/bioinformatics/btw361
S571**,10.1038/s43588-024-00716-2
S669**,10.1093/bib/bbab555
s2648**,10.1093/bioinformatics/btp445
S4346**10.1038/s43588-024-00716-2
S8754**,10.1038/s43588-024-00716-2
vb1432**,10.3390/ijms19041009
PPB_Affinity**,10.1038/s41597-024-03997-4