Unnamed: 0
int64
0
389k
code
stringlengths
26
79.6k
docstring
stringlengths
1
46.9k
351,300
def _minion_event(self, load): if not in load: return False if not in load and ( not in load or not in load): return False if in load: for event in load[]: if in event: event_data = event[] else...
Receive an event from the minion and fire it on the master event interface
351,301
def _countEXT(self,extname="SCI"): count=0 if (self._image[].header["EXTEND"]): for i,hdu in enumerate(self._image): if i > 0: hduExtname = False if in hdu.header: self._image[i].extnum=i ...
Count the number of extensions in the file with the given name (``EXTNAME``).
351,302
def readFile( self, fileName, buffer, numberOfBytesToRead, numberOfBytesRead, offset, dokanFileInfo, ): try: ret = self.operations(, fileName, numberOfBytesToRead, offset) data = ctypes.create_string_buffer( ...
Read a file. :param fileName: name of file to read :type fileName: ctypes.c_wchar_p :param buffer: buffer for content read :type buffer: ctypes.c_void_p :param numberOfBytesToRead: number of bytes to read :type numberOfBytesToRead: ctypes.c_ulong :param numberOfB...
351,303
def perform_permissions_check(self, user, obj, perms): return self.request.forum_permission_handler.can_delete_post(obj, user)
Performs the permission check.
351,304
def get_group(path, follow_symlinks=True): * return stats(os.path.expanduser(path), follow_symlinks=follow_symlinks).get(, False)
Return the group that owns a given file path file or directory of which to get the group follow_symlinks indicated if symlinks should be followed CLI Example: .. code-block:: bash salt '*' file.get_group /etc/passwd .. versionchanged:: 0.16.4 ``follow_symlinks``...
351,305
def do_help(self, command): if command: doc = getattr(self, + command).__doc__ print(cyan(doc.replace( * 8, ))) else: print(magenta()) print(magenta()) names = self.get_names() names.sort() for name in names: ...
Display this help message.
351,306
def get_partition_id(self, key): data = self._client.serialization_service.to_data(key) count = self.get_partition_count() if count <= 0: return 0 return hash_to_index(data.get_partition_hash(), count)
Returns the partition id for a Data key. :param key: (object), the data key. :return: (int), the partition id.
351,307
def message_stanza_handler(stanza_type = None, payload_class = None, payload_key = None, usage_restriction = "post-auth"): if stanza_type is None: stanza_type = "normal" return _stanza_handler("message", stanza_type, payload_class, payload_key, ...
Method decorator generator for decorating <message/> stanza handler methods in `XMPPFeatureHandler` subclasses. :Parameters: - `payload_class`: payload class expected - `stanza_type`: expected value of the 'type' attribute of the stanza. `None` means all types except 'error' -...
351,308
def log_request_success(self, method, full_url, path, body, status_code, response, duration): if body and not isinstance(body, dict): body = body.decode() logger.info( , method, full_url, status_code, duration ) logger.debug(, body) ...
Log a successful API call.
351,309
def HStruct_unpack(structT, data, getDataFn=None, dataWidth=None): if getDataFn is None: assert dataWidth is not None def _getDataFn(x): return toHVal(x)._auto_cast(Bits(dataWidth)) getDataFn = _getDataFn val = structT.fromPy(None) fData = iter(data) ac...
opposite of packAxiSFrame
351,310
def run(query, container=Null): if container == None: container = wrap(query)["from"] query_op = QueryOp.wrap(query, container=container, namespace=container.schema) else: query_op = QueryOp.wrap(query, container, container.namespace) if container == None: from jx_pytho...
THIS FUNCTION IS SIMPLY SWITCHING BASED ON THE query["from"] CONTAINER, BUT IT IS ALSO PROCESSING A list CONTAINER; SEPARATE TO A ListContainer
351,311
def to_coord_frame(self, frame, galactocentric_frame=None, **kwargs): if self.ndim != 3: raise ValueError("Can only change representation for " "ndim=3 instances.") if galactocentric_frame is None: galactocentric_frame = coord.Galactocentri...
Transform the orbit from Galactocentric, cartesian coordinates to Heliocentric coordinates in the specified Astropy coordinate frame. Parameters ---------- frame : :class:`~astropy.coordinates.BaseCoordinateFrame` The class or frame instance specifying the desired output fra...
351,312
def _prepare_retry(self, state, failure, original_list): failed_recipient = failure.value.args[0] new_list = copy.deepcopy(original_list) if failed_recipient is not None: if failed_recipient in new_list: new_list.remove(failed_recipient) else: ...
Here we prepare to ask another brother to resolve our problem. The failure here is always ProtocolFailed. If contract finished without getting a bid (resolver is not there) we are removing the guy from our local list. If we just run into the timeout, we will retry in the same setup.
351,313
def remove_file(master_ip, filename, spark_on_toil): master_ip = master_ip.actual ssh_call = [, , , master_ip] if spark_on_toil: output = check_output(ssh_call + [, ]) container_id = next(line.split()[0] for line in output.splitlines() if in line) ssh_call += [, , container_i...
Remove the given file from hdfs with master at the given IP address :type masterIP: MasterAddress
351,314
def create_appointment_group(self, appointment_group_title, appointment_group_context_codes, appointment_group_description=None, appointment_group_location_address=None, appointment_group_location_name=None, appointment_group_max_appointments_per_participant=None, appointment_group_min_appointments_per_participant=None...
Create an appointment group. Create and return a new appointment group. If new_appointments are specified, the response will return a new_appointments array (same format as appointments array, see "List appointment groups" action)
351,315
def export(self, storage_client, overwrite=True): title = % self.__class__.__name__ method_list = [ , , , , , , , ] for method in method_list: if not getattr(storage_client, method, None): from labpack.parsing.gramma...
a method to export all the records in collection to another platform :param storage_client: class object with storage client methods :return: string with exit message
351,316
def keep_params(self, base_key, *params): self.params[base_key + + .join(params)] = self.keep_params_s( self.params[base_key], params)
Method to keep only specific parameters from a parameter documentation. This method extracts the given `param` from the `base_key` item in the :attr:`params` dictionary and creates a new item with the original documentation with only the description of the param. This method works for `...
351,317
def dict_contents(self, use_dict=None, as_class=dict): if _debug: Choice._debug("dict_contents use_dict=%r as_class=%r", use_dict, as_class) if use_dict is None: use_dict = as_class() for element in self.choiceElements: value = getattr(self, e...
Return the contents of an object as a dict.
351,318
def create_cfg(self, cfg_file, defaults=None, mode=): t exits also sets up the first_run attribute. also sets correct windows permissions you can add custom stuff to the config by doing app.cfg[] = remember to call cfg.save() jsonyamlcfg file found :...
set mode to json or yaml? probably remove this option..Todo Creates the config file for your app with default values The file will only be created if it doesn't exits also sets up the first_run attribute. also sets correct windows permissions you can add custom stuff to the c...
351,319
def main(): if OPTIONS.get(): disable_all_colors() elif OPTIONS.get(): enable_all_colors() if is_enabled() and os.name == : Windows.enable(auto_colors=True, reset_atexit=True) elif OPTIONS.get(): set_light_background() elif OPTIONS.get(): set_dark_backgr...
Main function called upon script execution.
351,320
def find_links_or_emphs(text, root_node): delimiters_re = re.compile(r) i = 0 delimiters = [] escape = False matches = [] code_pattern = re.compile(r) while i < len(text): if escape: escape = False i += 1 elif text[i] == : escape = Tr...
Fink links/images or emphasis from text. :param text: the original text. :param root_node: a reference to the root node of the AST. :returns: an iterable of match object.
351,321
def MessageToRepr(msg, multiline=False, **kwargs): indent = kwargs.get(, 0) def IndentKwargs(kwargs): kwargs = dict(kwargs) kwargs[] = kwargs.get(, 0) + 4 return kwargs if isinstance(msg, list): s = for item in msg: if multiline: ...
Return a repr-style string for a protorpc message. protorpc.Message.__repr__ does not return anything that could be considered python code. Adding this function lets us print a protorpc message in such a way that it could be pasted into code later, and used to compare against other things. Args: ...
351,322
def shapeRecords(self): return ShapeRecords([ShapeRecord(shape=rec[0], record=rec[1]) \ for rec in zip(self.shapes(), self.records())])
Returns a list of combination geometry/attribute records for all records in a shapefile.
351,323
def spread(symbol, token=, version=): _raiseIfNotStr(symbol) return _getJson( + symbol + , token, version)
This returns an array of effective spread, eligible volume, and price improvement of a stock, by market. Unlike volume-by-venue, this will only return a venue if effective spread is not ‘N/A’. Values are sorted in descending order by effectiveSpread. Lower effectiveSpread and higher priceImprovement values are ...
351,324
def _new_conn(self): extra_kw = {} if self.source_address: extra_kw[] = self.source_address if self.socket_options: extra_kw[] = self.socket_options try: conn = connection.create_connection( (self._dns_host, self.port), self....
Establish a socket connection and set nodelay settings on it. :return: New socket connection.
351,325
def _ParseLine(self, parser_mediator, structure): month, day_of_month, year, hours, minutes, seconds, milliseconds = ( structure.date_time) year += 2000 time_elements_tuple = ( year, month, day_of_month, hours, minutes, seconds, milliseconds) try: date_time = dfdatetime...
Parses a logline and store appropriate attributes. Args: parser_mediator (ParserMediator): mediates interactions between parsers and other components, such as storage and dfvfs. structure (pyparsing.ParseResults): structure of tokens derived from a line of a text file.
351,326
def streams(self, stream_types=None, sorting_excludes=None): try: ostreams = self._get_streams() if isinstance(ostreams, dict): ostreams = ostreams.items() if ostreams: ostreams = list(ostreams) except NoStreamsE...
Attempts to extract available streams. Returns a :class:`dict` containing the streams, where the key is the name of the stream, most commonly the quality and the value is a :class:`Stream` object. The result can contain the synonyms **best** and **worst** which points to the st...
351,327
def _block_device_mapping_handler(self): mapping_counter = 1 mapping_device_name_fmt = mapping_del_on_term_fmt = while True: mapping_device_name = mapping_device_name_fmt % mapping_counter if mapping_device_name not in self.querystring.keys(): ...
Handles requests which are generated by code similar to: instance.modify_attribute( BlockDeviceMappings=[{ 'DeviceName': '/dev/sda1', 'Ebs': {'DeleteOnTermination': True} }] ) The querystring contains information s...
351,328
def get_field_list(fields, schema): if not schema: return [] return all_fields
Convert a field list spec into a real list of field names. For tables, we return only the top-level non-RECORD fields as Google charts can't handle nested data.
351,329
async def main(wallet_name: str) -> None: logging.basicConfig(level=logging.WARN, format=) logging.getLogger().setLevel(logging.ERROR) path_start = join(RevRegBuilder.dir_tails_sentinel(wallet_name), ) with open(path_start, ) as fh_start: start_data = json.loads(fh_start.read()) remo...
Main line for revocation registry builder operating in external process on behalf of issuer agent. :param wallet_name: wallet name - must match that of issuer with existing wallet
351,330
def _cli_helper_dedicated_host(env, result, table): dedicated_host_id = utils.lookup(result, , ) if dedicated_host_id: table.add_row([, dedicated_host_id]) try: dedicated_host = env.client.call(, , id=dedicated_host_id) ...
Get details on dedicated host for a virtual server.
351,331
async def get_input_sender(self): if self.input_sender is None and self._sender_id: await self._refetch_sender() return self._input_sender
Returns `input_sender`, but will make an API call to find the input sender unless it's already cached.
351,332
def displayhtml(site_key, language=, theme=, fallback=False, d_type=, size=): return % { : language, : site_key, : theme, : d_type, : size, : fallback, }
Gets the HTML to display for reCAPTCHA site_key -- The site key language -- The language code for the widget. theme -- The color theme of the widget. `light` or `dark` fallback -- Old version recaptcha. d_type -- The type of CAPTCHA to serve. `image` or `audio` size -- The size of the dispalyed...
351,333
def p_switch_stmt(p): def backpatch(expr, stmt): if isinstance(stmt, node.if_stmt): stmt.cond_expr.args[1] = expr backpatch(expr, stmt.else_stmt) backpatch(p[2], p[4]) p[0] = p[4]
switch_stmt : SWITCH expr semi_opt case_list END_STMT
351,334
def rename_file_group_to_serial_nums(file_lst): file_lst.sort() c = 1 for f in file_lst: dirname = get_abspath(f.dirname()) fdest = f.joinpath(dirname, "{0:04d}".format(c) + OUTPUT_DICOM_EXTENSION) log.info(.format(f, fdest)) f.rename(fdest) ...
Will rename all files in file_lst to a padded serial number plus its extension :param file_lst: list of path.py paths
351,335
def rollapply(self, func, window=20, **kwargs): return self.apply(func, window=window, **kwargs)
A generic :ref:`rolling function <rolling-function>` for function *func*. Same construct as :meth:`dynts.TimeSeries.apply` but with default ``window`` set to ``20``.
351,336
def sub_dfs_by_num(df, num): size = len(df) / float(num) for i in range(num): yield df.iloc[int(round(size * i)): int(round(size * (i + 1)))]
Get a generator yielding num consecutive sub-dataframes of the given df. Arguments --------- df : pandas.DataFrame The dataframe for which to get sub-dataframes. num : int The number of sub-dataframe to divide the given dataframe into. Returns ------- generator A ge...
351,337
def upgrade(name=None, pkgs=None, **kwargs): <package>old<old-version>new<new-version>** old = list_pkgs() cmd = [, , ] if kwargs.get(, False): cmd.append() if pkgs: cmd.extend(pkgs) elif name: cmd.append(name) result = __salt__[]...
Run a full package upgrade (``pkg_add -u``), or upgrade a specific package if ``name`` or ``pkgs`` is provided. ``name`` is ignored when ``pkgs`` is specified. Returns a dictionary containing the changes: .. versionadded:: 2019.2.0 .. code-block:: python {'<package>': {'old': '<old-versi...
351,338
def _determine_mjds_to_download( self, days): self.log.info() sqlQuery = u % locals() mjds = readquery( log=self.log, sqlQuery=sqlQuery, dbConn=self.atlasMoversDBConn, quiet=False ) if len...
*determine which ATLAS nights require to be cached locally* **Key Arguments:** - ``days`` -- the number of days data to cache locally **Return:** - ``mjds`` -- a list of the MJDs to be downloaded from the ATLAS datastore in hawaii
351,339
def _prepare_bam(bam_file, bed_file, config): if not bam_file or not bed_file: return bam_file out_file = utils.append_stem(bam_file, ) bedtools = config_utils.get_program("bedtools", config) if not utils.file_exists(out_file): with file_transaction(out_file) as tx_out: ...
Remove regions from bed files
351,340
def metadata_add_endpoints(self): metadata = load_mpe_service_metadata(self.args.metadata_file) group_name = metadata.get_group_name_nonetrick(self.args.group_name) for endpoint in self.args.endpoints: metadata.add_endpoint(group_name, endpoint) metadata.save_pretty(...
Metadata: add endpoint to the group
351,341
def get(self, url, params): url = self.host + url if params: url = url + "?" + urllib.parse.urlencode(params) try: resp = requests.get(url, allow_redirects=False, headers=self.headers, auth=self.oauth) except TooManyRedirects as e: resp = e.r...
Issues a GET request against the API, properly formatting the params :param url: a string, the url you are requesting :param params: a dict, the key-value of all the paramaters needed in the request :returns: a dict parsed of the JSON response
351,342
def make_dynamic_prompt(self, prompt): patterns = ["[\r\n]" + pattern_manager.pattern( self.platform, pattern_name, compiled=False) for pattern_name in self.target_prompt_components] patterns_re = "|".join(patterns).format(hostname=re.escape(prompt)) try: promp...
Extend prompt with flexible mode handling regexp.
351,343
def calling(data): chip_bam = data.get("work_bam") input_bam = data.get("work_bam_input", None) caller_fn = get_callers()[data["peak_fn"]] name = dd.get_sample_name(data) out_dir = utils.safe_makedir(os.path.join(dd.get_work_dir(data), data["peak_fn"], name)) out_files = caller_fn(name, chi...
Main function to parallelize peak calling.
351,344
def set_encoding (parsobj, attrs): charset = attrs.get_true(, u) if charset: charset = charset.encode(, ).lower() elif attrs.get_true(, u).lower() == u"content-type": charset = attrs.get_true(, u) charset = charset.encode(, ).lower() charset = ...
Set document encoding for the HTML parser according to the <meta> tag attribute information. @param attrs: attributes of a <meta> HTML tag @type attrs: dict @return: None
351,345
def add(self, order, cells, no_validation=False): self._normalized = False order = self._validate_order(order) if no_validation: self._orders[order].update(cells) else: cell_set = set() for cell in cells: ...
Add cells at a given order to the MOC. The cells are inserted into the MOC at the specified order. This leaves the MOC in an un-normalized state. The cells are given as a collection of integers (or types which can be converted to integers). >>> m = MOC() >>> m.add(4, ...
351,346
def infer_x(self, y_desired, **kwargs): sigma = kwargs.get(, self.sigma) k = kwargs.get(, self.k) xq = self._guess_x(y_desired, k = k, sigma = sigma, **kwargs)[0] dists, index = self.fmodel.dataset.nn_x(xq, k = k) w = self.fmodel._we...
Provide an inversion of yq in the input space @param yq an array of float of length dim_y
351,347
def _draw_trees(trees, nrow=1, ncol=1, rmargin=.3, iopts=None, outdir=".", shfile=None, **kwargs): from jcvi.graphics.tree import draw_tree if shfile: SHs = DictFile(shfile, delimiter="\t") ntrees = len(trees) n = nrow * ncol for x in xrange(int(ceil(float(ntrees)/n))): fi...
Draw one or multiple trees on one plot.
351,348
def impact_table_extractor(impact_report, component_metadata): context = {} extra_args = component_metadata.extra_args components_list = resolve_from_dictionary( extra_args, ) if not impact_report.impact_function.debug_mode: components_list.pop(, None) context[]...
Extracting impact summary of the impact layer. :param impact_report: the impact report that acts as a proxy to fetch all the data that extractor needed :type impact_report: safe.report.impact_report.ImpactReport :param component_metadata: the component metadata. Used to obtain information ...
351,349
def getStore(self) : store = self._store.getStore() for priv in self.privates : v = getattr(self, priv) if v : store[priv] = v return store
return the store in a dict format
351,350
def getData(self): haveOnCurve = False for point in self._points: if point.segmentType is not None: haveOnCurve = True break if haveOnCurve: _prepPointsForSegments(self._points) firstPoin...
Return a list of normalized InputPoint objects for the contour drawn with this pen.
351,351
def _extractCreations(self, dataSets): for dataSet in dataSets: modelObject = self._objectFromID(dataSet[self._IDENTIFIER_KEY]) if modelObject is self._NO_OBJECT_MARKER: dataCopy = dataSet.copy() identifier = dataCopy.pop(self._IDENTIFIER_KEY) ...
Find the elements of C{dataSets} which represent the creation of new objects. @param dataSets: C{list} of C{dict} mapping C{unicode} form submission keys to form submission values. @return: iterator of C{tuple}s with the first element giving the opaque identifier of an ...
351,352
def crossings_nonzero_pos2neg(data): import numpy as np if isinstance(data, np.ndarray): pass elif isinstance(data, list): data = np.asarray(data) else: raise IOError() pos = data > 0 crossings = (pos[:-1] & ~pos[1:]).nonzero()[0] return crossings
Find `indices of zero crossings from positive to negative values <http://stackoverflow.com/questions/3843017/efficiently-detect-sign-changes-in-python>`_. :param data: numpy array of floats :type data: numpy array of floats :return crossings: crossing indices to data :rtype crossings: n...
351,353
def set_interval(self, interval): if type(interval) != float or type(interval) != int: raise InvalidInput("Interval value must be of float or int") self._config[]
Set the polling interval for the process thread. :param interval: How often to poll the Hottop :type interval: int or float :returns: None :raises: InvalidInput
351,354
def drop(self, table): blueprint = self._create_blueprint(table) blueprint.drop() self._build(blueprint)
Drop a table from the schema. :param table: The table :type table: str
351,355
def sim(self, src, tar): r if src == tar: return 1.0 elif not src or not tar: return 0.0 return len(self.lcsseq(src, tar)) / max(len(src), len(tar))
r"""Return the longest common subsequence similarity of two strings. Longest common subsequence similarity (:math:`sim_{LCSseq}`). This employs the LCSseq function to derive a similarity metric: :math:`sim_{LCSseq}(s,t) = \frac{|LCSseq(s,t)|}{max(|s|, |t|)}` Parameters -------...
351,356
def parityOf(int_type): parity = 0 while (int_type): parity = ~parity int_type = int_type & (int_type - 1) return(parity)
Calculates the parity of an integer, returning 0 if there are an even number of set bits, and -1 if there are an odd number.
351,357
def regex_parse_template(self, template, pattern): groups = [] literals = [] replacements = _compile_replacement_helper(pattern, template) count = 0 for part in replacements: if isinstance(part, int): literals.append(None) gro...
Parse template for the regex module. Do NOT edit the literal list returned by _compile_replacement_helper as you will edit the original cached value. Copy the values instead.
351,358
def _message_queryset(self, include_read=False): expire = timezone.now() qs = PersistentMessage.objects.\ filter(user=self.get_user()).\ filter(Q(expires=None) | Q(expires__gt=expire)) if not include_read: qs = qs.exclude(read=True) return qs
Return a queryset of messages for the request user
351,359
def from_stream(cls, stream, offset): ifd_parser = _IfdParser(stream, offset) entries = dict((e.tag, e.value) for e in ifd_parser.iter_entries()) return cls(entries)
Return a new |_IfdEntries| instance parsed from *stream* starting at *offset*.
351,360
def run(self, *args, **kw): log.debug(.format( self.__class__.__name__, args )) if self.kind == OperatorTypes.ATTRIBUTE: return self.match(self.ctx) else: return self.run_matcher(*args, **kw)
Runs the current operator with the subject arguments to test. This method is implemented by matchers only.
351,361
def add_log_entry(self, process_name, timeperiod, msg): tree = self.get_tree(process_name) node = tree.get_node(process_name, timeperiod) node.add_log_entry([datetime.utcnow().strftime(), msg])
adds a non-persistent log entry to the tree node
351,362
def __replace_an(sentence): if sentence is not None: while sentence.find() != -1: an_index = sentence.find() if an_index > -1: an_index += 4 if sentence[an_index] in : sentence = sentence.replace(, str(), 1) ...
Lets find and replace all instances of #AN This is a little different, as this depends on whether the next word starts with a vowel or a consonant. :param _sentence:
351,363
def loadavg(name, maximum=None, minimum=None): ret = {: name, : False, : , : {}, : {}} data = __salt__[]() if name not in data: ret[] = False ret[] += .format( name ) return ret if minimum and maximum an...
Return the current load average for the specified minion. Available values for name are `1-min`, `5-min` and `15-min`. `minimum` and `maximum` values should be passed in as strings.
351,364
def _add_unique_file(self, item): if item not in self.config[]: self.config[].append(item)
adds a file in self.config['files'] only if not present already
351,365
def devopsy(self, *args): args = .join(self.message[].split()[1:]) if args: base_main = { : , : } main_items = list(base_main.items()) key, val = random.choice(main_items) else: base_alt = { ...
Return a gif based on search of several *reactions Ported to Legobot from: "https://github.com/ricardokirkner/err-devops-reactions" ... and extended. Return a random gif if no query is specified or query not found Example: !devopsy somefoofulquery ...
351,366
def get_controller(self, path): path_info = path.lstrip().split(, 2) try: return self._routes.get(path_info[0] + + path_info[1]) except (IndexError, KeyError): return self._routes.get(path_info[0] or )
Return controller that handle given path. Args: - path: requested path, like: /blog/post_view/15
351,367
def onSync(self, event): SETUP = self.statement() if SETUP: sql, data = SETUP(self.database()) if event.context.dryRun: print sql % data else: self.execute(sql, data, writeAccess=True)
Initializes the database by defining any additional structures that are required during selection.
351,368
def relabel(self, mapping): if not isinstance(mapping, dict): raise pycmMatrixError(MAPPING_FORMAT_ERROR) if self.classes != list(mapping.keys()): raise pycmMatrixError(MAPPING_CLASS_NAME_ERROR) for row in self.classes: temp_dict = {} temp...
Rename ConfusionMatrix classes. :param mapping: mapping dictionary :type mapping : dict :return: None
351,369
def _join_seq(d, k, v): if k not in d: d[k] = list(v) elif isinstance(d[k], list): for item in v: if item not in d[k]: d[k].insert(0, item) elif isinstance(d[k], string_types): v.append(d[k]) d[k] = v
Add a sequence value to env dict
351,370
def interface_to_str(interface): if isinstance(interface, ModuleType): interface = interface.__name__ return re.sub(r"optlang.|.interface", "", interface)
Give a string representation for an optlang interface. Parameters ---------- interface : string, ModuleType Full name of the interface in optlang or cobra representation. For instance 'optlang.glpk_interface' or 'optlang-glpk'. Returns ------- string The name of the inte...
351,371
def getElementByName(self, beamline, name): try: assert beamline.upper() in self.kws_bl except AssertionError: print( % beamline) return try: assert name.lower() in self.getFullBeamline(beamline, extend=True) orderedLattice_l...
return element list by literal name in beamline each element is tuple like (name, type, order) :param beamline: beamline name :param name: element literal name
351,372
def write(self, outfile, encoding): u cal = Calendar() cal.add(, ) cal.add(, ) for ifield, efield in FEED_FIELD_MAP: val = self.feed.get(ifield) if val is not None: cal.add(efield, val) self.write_items(cal) to_ical = get...
u""" Writes the feed to the specified file in the specified encoding.
351,373
def emit(msg_dict): usersuserlukeactionloginuid log.debug() log.debug(msg_dict) ret = {} extracted = napalm_logs.utils.extract(_RGX, msg_dict[], _RGX_PARTS) if not extracted: return ret uid_key_path = .format(extracted) uid_value = int(extracted[]) log.debug(, uid_value, uid_...
Extracts the details from the syslog message and returns an object having the following structure: .. code-block:: python { u'users': { u'user': { u'luke': { u'action': { u'login': True ...
351,374
def _adjacency_to_edges(adjacency): edges = set() for u in adjacency: for v in adjacency[u]: try: edge = (u, v) if u <= v else (v, u) except TypeError: if (v, u) in edges: continue edge = (u...
determine from an adjacency the list of edges if (u, v) in edges, then (v, u) should not be
351,375
def reset_game(self): self.ms_game.reset_game() self.update_grid() self.time = 0 self.timer.start(1000)
Reset game board.
351,376
def load_module_from_file(filepath, path=None, use_sys=True, extrapath=None): modpath = modpath_from_file(filepath, extrapath) return load_module_from_modpath(modpath, path, use_sys)
Load a Python module from it's path. :type filepath: str :param filepath: path to the python module or package :type path: list or None :param path: optional list of path where the module or package should be searched (use sys.path if nothing or None is given) :type use_sys: bool ...
351,377
def setup_block_and_grid(problem_size, grid_div, params, block_size_names=None): threads = get_thread_block_dimensions(params, block_size_names) current_problem_size = get_problem_size(problem_size, params) grid = get_grid_dimensions(current_problem_size, params, grid_div, block_size_names) return ...
compute problem size, thread block and grid dimensions for this kernel
351,378
def validate_list_of_identical_dicts(self, list_of_dicts): hashes = [] for _dict in list_of_dicts: hashes.append(hash(frozenset(_dict.items()))) self.log.debug(.format(hashes)) if len(set(hashes)) == 1: self.log.debug() else: return ...
Check that all dicts within a list are identical.
351,379
def do_wordwrap(environment, s, width=79, break_long_words=True, wrapstring=None): if not wrapstring: wrapstring = environment.newline_sequence import textwrap return wrapstring.join(textwrap.wrap(s, width=width, expand_tabs=False, replace_whit...
Return a copy of the string passed to the filter wrapped after ``79`` characters. You can override this default using the first parameter. If you set the second parameter to `false` Jinja will not split words apart if they are longer than `width`. By default, the newlines will be the default newlines ...
351,380
def notify_contact(mail, owner, graas_url, repos, first_repo=False): footer = twitter_txt = "Check Cauldron.io dashboard for %s at %s/dashboards/%s" % (owner, graas_url, owner) twitter_url = "https://twitter.com/intent/tweet?text=" + quote_plus(twitter_txt) twitter_url += "&via=bitergia" if...
Send an email to the contact with the details to access the Kibana dashboard
351,381
def stderr(msg, silent=False): if not silent: print(msg, file=sys.stderr)
write msg to stderr if not silent
351,382
def _run_external_commands(self): commands = cherrypy.request.json with self.app.lock: self.app.sched.run_external_commands(commands[])
Post external_commands to scheduler (from arbiter) Wrapper to to app.sched.run_external_commands method :return: None
351,383
def PhyDMSParser(): parser = ArgumentParserNoArgHelp(description=( ).format(phydmslib.__acknowledgments__, phydmslib.__version__, phydmslib.__url__), formatter_class=argparse.ArgumentDefaultsHelpFormatter) parser.add_argument(, type=ExistingFile, ...
Returns *argparse.ArgumentParser* for ``phydms`` script.
351,384
def _reset_attributes(self): self.channels = {} self.users = {} self._receive_buffer = b self._pending = {} self._handler_top_level = False self._ping_checker_handle = None self.logger = logging.getLogger(__name__) ...
Reset attributes.
351,385
def read_frames(self, copy=True): scale = abs(self.point_scale) is_float = self.point_scale < 0 point_bytes = [2, 4][is_float] point_dtype = [np.int16, np.float32][is_float] point_scale = [scale, 1][is_float] points = np.zeros((self.point_used, 5), float) ...
Iterate over the data frames from our C3D file handle. Parameters ---------- copy : bool If False, the reader returns a reference to the same data buffers for every frame. The default is True, which causes the reader to return a unique data buffer for each fr...
351,386
def recent_post(self, author=None, daysback=0, flag=0): if not author: author = self.mainaccount for num_of_retries in range(default.max_retry): try: self.blog = self.steem_instance().get_blog(author, 0, 30) except Exception as e: ...
Returns the most recent post from the account given. If the days back is greater than zero then the most recent post is returned for that day. For instance if daysback is set to 2 then it will be the most recent post from 2 days ago (48 hours).
351,387
def _to_dict(self): return { : getattr(self, "auto_watering"), : getattr(self, "droplet"), : getattr(self, "is_watering"), : getattr(self, "name"), : getattr(self,...
Method to build zone dict.
351,388
def lookup(self, *coordinate_arrays): assert len(coordinate_arrays) == self.dimensions index_arrays = [np.clip(np.searchsorted(self.bin_edges[i], coordinate_arrays[i]) - 1, 0, len(self.bin_edges[i]) - 2) ...
Lookup values at specific points. coordinate_arrays: numpy arrays of coordinates, one for each dimension e.g. lookup(np.array([0, 2]), np.array([1, 3])) looks up (x=0, y=1) and (x=2, y3). Clips if out of range!! TODO: option to throw exception instead. TODO: Needs tests!! TODO: ...
351,389
def indent_string(string, num_spaces=2): indent = .ljust(num_spaces) return indent + re.sub(, + indent, string)
Add indentation to a string. Replaces all new lines in the string with a new line followed by the specified number of spaces, and adds the specified number of spaces to the start of the string.
351,390
def add_non_hs_service(self, info, address): if self.protocol and self.protocol != PROTOCOL_DMAP: return name = info.properties[b].decode() self._handle_service( address, name, conf.DmapService(None, port=info.port))
Add a new device without Home Sharing to discovered list.
351,391
def _embedding_tsne(matrix, dimensions=3, early_exaggeration=12.0, method=, perplexity=30, learning_rate=200, n_iter=1000): tsne = sklearn.manifold.TSNE(n_components=dimensions, metric="precomputed", early...
Private method to perform tSNE embedding :param matrix: treeCl Distance Matrix :param dimensions: Number of dimensions in which to embed points :return: treeCl CoordinateMatrix
351,392
def handle_report_metric_data(self, data): value = extract_scalar_reward(data[]) bracket_id, i, _ = data[].split() bracket_id = int(bracket_id) if data[] == : self.brackets[bracket_id].set_config_perf(int(i), data[], sys.maxsize, value) ...
Parameters ---------- data: it is an object which has keys 'parameter_id', 'value', 'trial_job_id', 'type', 'sequence'. Raises ------ ValueError Data type not supported
351,393
def post_series_unpublish(self, id, **data): return self.post("/series/{0}/unpublish/".format(id), data=data)
POST /series/:id/unpublish/ Unpublishes a repeating event series and all of its occurrences that are not already completed, canceled, or deleted. In order for a free series to be unpublished, it must not have any pending or completed orders for any dates, even past dates. In order for a paid ser...
351,394
def count_by_type(self): pistack = defaultdict(int) for contact in self.timeseries: pkey = (contact.ligandring,contact.type, contact.resid,contact.resname,contact.segid) pistack[pkey]+=1 dtype = [("ligand_ring_ids",list),("type","|U4"),("resid",int),...
Count how many times each individual pi-pi interaction occured throughout the simulation. Returns numpy array.
351,395
def is_within_limits(self, limit, date, dates): return any((self.second_diff(date, d) <= limit for d in dates))
Returns True if the difference between date and any value in dates is less than or equal to limit.
351,396
def proc_polyline(self, tokens): pts = [(p["x"], p["y"]) for p in tokens["points"]] component = Polyline(pen=self.pen, points=pts) return component
Returns the components of a polyline.
351,397
def get(self, historics_id=None, maximum=None, page=None, with_estimate=None): params = {: historics_id} if maximum: params[] = maximum if page: params[] = page params[] = 1 if with_estimate else 0 return self.request.get(, params=params)
Get the historics query with the given ID, if no ID is provided then get a list of historics queries. Uses API documented at http://dev.datasift.com/docs/api/rest-api/endpoints/historicsget :param historics_id: (optional) ID of the query to retrieve :type historics_id: str ...
351,398
def render_impl(self, template, context, at_paths=None, at_encoding=anytemplate.compat.ENCODING, **kwargs): renderer = self._make_renderer(at_paths, at_encoding, **kwargs) ctxs = [] if context is None else [context] if os.path.sep in template: return r...
Render given template file and return the result. :param template: Template file path :param context: A dict or dict-like object to instantiate given template file :param at_paths: Template search paths :param at_encoding: Template encoding :param kwargs: Keyword arg...
351,399
def gaussian(self, x, p): y = (1.0 / (p[1] * np.sqrt(2 * np.pi)) * np.exp(-(x - p[0]) ** 2 / (2 * p[1] ** 2))) * p[2] return y
Gaussian fitting function in 1D. Makes a sine function with amplitude determined by maxv. See calc_fwhm(). p[0]==mean, p[1]==sdev, p[2]=maxv