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import sys
import logging
from flask import jsonify, request, url_for, make_response, abort, render_template
from flask_api import status # HTTP Status Codes
from flask_restplus import Api, Resource, fields, reqparse, inputs
from service.models import Category, DataValidationError
from service.train import Similarit... |
# Copyright (c) 2018 PaddlePaddle Authors. All Rights Reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by app... |
import copy
import json
import base64
from functools import partial
import asyncio
import collections
from .values import DocStringLine, MetricValue
from .registry import Registry
from .task_manager import TaskManager
REGISTRY = Registry(task_manager=TaskManager())
DEFAULT_GAUGE_INDEX_KEY = 'GLOBAL_GAUGE_INDEX'
... |
#!/usr/bin/env python
import logging
import re
import sys
import yaml
from lxml import etree
BASE_LOG_FORMAT = '%(levelname)s: %(message)s'
# CPE w/o 2.3 component: cpe:/a:nginx:nginx:0.1.0"
REGEX_CPE = re.compile('^cpe:/([aho]):([^:]+):([^:]+)')
# CPE w/ 2.3 component: cpe:2.3:a:f5:nginx:0.1.0:*:*:*:*:*:*:*
REGEX... |
from pydeation.document import Document
from pydeation.animation.animation import VectorAnimation, AnimationGroup
from pydeation.animation.object_animators import Show, Hide
from abc import ABC, abstractmethod
from collections import defaultdict
import c4d
class Scene(ABC):
"""abstract class acting as blueprint f... |
import gym
import gym.spaces
import json
import numpy as np
import os
import socket
gym_version = tuple(int(x) for x in gym.__version__.split('.'))
class Channel:
def __init__(self):
self.sock = None
self.dirty = False
self._value = None
self.annotations = {}
def set_socket(s... |
"""Testssuite of the invoices-module."""
from typing import Any
from typing import Dict
from typing import List
import datetime
import pytest
from pydantic import ValidationError
from tia.balances import AccountingItem
from tia.basemodels import TypedList
from tia.client import Client
from tia.company import Company... |
#!/usr/bin/env python
"""
Usage:
train.py [options] SAVE_FOLDER TRAIN_DATA_PATH VALID_DATA_PATH TEST_DATA_PATH
train.py [options] [SAVE_FOLDER]
*_DATA_PATH arguments may either accept (1) directory filled with .jsonl.gz files that we use as data,
or a (2) plain text file containing a list of such directories (... |
from insights import add_filter
from insights.parsers.httpd_conf import HttpdConf
from insights.specs import Specs
from insights.tests import context_wrap
HTTPD_CONF_1 = """
<Directory />
Options FollowSymLinks
AllowOverride None
</Directory>
SSLProtocol -ALL +SSLv3
#SSLProtocol all -SSLv2
NSSProtocol SSLV3 ... |
# -*- coding: utf-8 -*-
##############################################################################
#
# OpenERP, Open Source Business Applications
# Copyright (C) 2012 OpenERP S.A. (<http://openerp.com>).
#
# This program is free software: you can redistribute it and/or modify
# it under the terms of the... |
# =============================================================================
# Module: pheno
# File: pheno/__init__.py
# Author: <NAME>
# Created: 02/12/2015
#
# Copyright (c) <NAME> 2015, all rights reserved.
# =============================================================================
#
# Description:
#... |
# coding=utf-8
import datetime as dt
import pytz
import sqlalchemy as sa
from sqlalchemy import func
from sqlalchemy.event import listen
from sqlalchemy.orm import relationship, foreign, remote
from sqlalchemy.sql import select, insert, update
from celery import schedules
from celery.utils.log import get_logger
fro... |
# importing libraries
import pandas as pd
import numpy as np
import matplotlib.pyplot as plt
import matplotlib
matplotlib.rcParams["figure.figsize"] = (20,10)
# importing the dataset
dataset = pd.read_csv(r"C:\00git\Bangalore-Real-Estate-Price-Prediction-WebApp-master\dataset\Bengaluru_House_Data.csv")
print(dataset.h... |
# Copyright 2012 Google Inc. All Rights Reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or ... |
# -*- coding: utf-8 -*-
import click
import logging
from pathlib import Path
import os
from dotenv import find_dotenv, load_dotenv
import json
import pandas as pd
import numpy as np
import urllib
import zipfile
from tqdm import tqdm
from glob import glob
from collections import defaultdict
from src.data.tcia import TCI... |
import numpy as np
import pandas as pd
import re
from joblib import dump, load
from rdflib import Graph, Literal, RDF, URIRef, Namespace
import pathlib
def get_dir(path=''):
"""Return the full path to the provided files in the OpenPredict data folder
Where models and features for runs are stored
"""
re... |
import angr
import claripy
import os
import sys
sys.path.append(os.path.join(os.path.dirname(__file__), '../..'))
from memory import factory
def check(state, obj, exp_values, conditions=()):
r = state.se.eval_upto(obj, len(exp_values) + 1, extra_constraints=conditions)
if len(r) != len(exp_values) or set(r)... |
#!/usr/bin python3
""" Graph functions for Display Frame of the Faceswap GUI """
import datetime
import os
import tkinter as tk
from tkinter import ttk
from math import ceil, floor
import matplotlib
matplotlib.use("TkAgg")
import matplotlib.animation as animation
from matplotlib import pyplot as plt, style
from matpl... |
from Models.Alphabet import Alphabet
from Models.Automate import Automate
from Models.Etat import Etat
from Models.Transition import Transition
class ExpressionReguliere:
def __init__(self, expression:str):
if not isinstance(expression, str):
raise TypeError('Une expression est de type str')
... |
# !/usr/bin/env python3
# -*- coding: utf-8 -*-
"""
Created on Wed Oct 31 16:23:13 2018
@author: samschott
"""
import sys
import os
import re
import platform
from PyQt5 import QtWidgets, QtCore, QtGui
_root = getattr(sys, '_MEIPASS', os.path.dirname(os.path.abspath(__file__)))
_icon_provider = QtWidgets.QFileIconPro... |
import pandas as pd
import numpy as np
import math
import tkinter as tk
from tkinter import ttk
from PIL import Image, ImageTk
import os
import sqlite3
from sqlite3 import OperationalError
#file = str(os.path.realpath(__file__))
csv_file = "/Users/nedimdrekovic/Python/DB/simplemaps_worldcities/" + "world_cities.csv"
s... |
# -*- coding: utf-8 -*-
'''
TTL SQLite Data Access Layer
Latest version can be found at https://github.com/letuananh/texttaglib
@author: <NAME> <<EMAIL>>
@license: MIT
'''
# Copyright (c) 2018, <NAME> <<EMAIL>>
#
# Permission is hereby granted, free of charge, to any person obtaining a copy
# of this software and a... |
#!/usr/bin/env python
# Copyright 2016 Google Inc. All Rights Reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required... |
# coding: utf-8
import base64
from keras import models
import tensorflow as tf
import os
import cv2
import numpy as np
import scipy.fftpack
graph = tf.get_default_graph()
PATH = lambda p: os.path.abspath(
os.path.join(os.path.dirname(__file__), p)
)
TEXT_MODEL = ""
IMG_MODEL = ""
def pretreatment_get_text(img,... |
# Purpose: compiler for line type definitions
# Created: 12.01.2018
# Copyright (c) 2018, <NAME>
# License: MIT License
# Auszug acadlt.lin
#
# *RAND,Rand __ __ . __ __ . __ __ . __ __ . __ __ .
# A,.5,-.25,.5,-.25,0,-.25
# *RAND2,Rand (.5x) __.__.__.__.__.__.__.__.__.__.__.
# A,.25,-.125,.25,-.125,0,-.125
# *RANDX2,R... |
import cv2
import torch
import scipy.special
import numpy as np
import torchvision
import torchvision.transforms as transforms
from PIL import Image
from enum import Enum
from scipy.spatial.distance import cdist
from ultrafastLaneDetector.model import parsingNet
lane_colors = [(0,0,255),(0,255,0),(255,0,0),(0,255,255... |
"""Contains decorator functions and functions for interacting with global data.
"""
from functools import wraps
import requests
from robin_stocks.robinhood.globals import LOGGED_IN, OUTPUT, SESSION
def set_login_state(logged_in):
"""Sets the login state"""
global LOGGED_IN
LOGGED_IN = logged_in
def set_... |
from __future__ import absolute_import
from __future__ import division
from __future__ import print_function
import os
import sys
from scipy.io import loadmat
import numpy as np
from scipy import linalg
import glob
import pickle
from six.moves import xrange # pylint: disable=redefined-builtin
from six.moves import ... |
# MIT License
# Copyright (c) 2018 Hotox
# Permission is hereby granted, free of charge, to any person obtaining a copy
# of this software and associated documentation files (the 'Software'), to deal
# in the Software without restriction, including without limitation the rights
# to use, copy, modify, merge, publish,... |
import inspect
import logging
import hashlib
import gym
import numpy as np
from gym.spaces import Box, Tuple, Dict
from mujoco_py import MjSimState
from mujoco_worldgen.util.types import enforce_is_callable
from mujoco_worldgen.util.sim_funcs import (
empty_get_info,
flatten_get_obs,
false_get_diverged,
... |
# coding: utf-8
from __future__ import unicode_literals
from ..compat import compat_urllib_parse_unquote
from ..utils import ExtractorError, int_or_none, try_get, unified_timestamp
from .common import InfoExtractor
from .once import OnceIE
class VoxMediaVolumeIE(OnceIE):
_VALID_URL = r"https?://volume\.vox-cdn\.... |
#nga.py by ludoux
# -*- coding: UTF-8 -*-
import re
import requests
import os
import sys
import time
from contextlib import closing
import hashlib
import json
#=============先修改
headers = {
'User-agent': 'Mozilla/5.0 (Windows NT 10.0; Win64; x64) AppleWebKit/537.36 (KHTML, like Gecko) Chrome/80.0.3987.163 Safari/53... |
import random
import time
import pytest
from ..platform import get_process_id, process_alive
from ..locking import TimeoutTimer, ExclusiveLock, Lock, LockRoster, \
ADD, REMOVE, SHARED, EXCLUSIVE, LockTimeout, NotLocked, NotMyLock
ID1 = "foo", 1, 1
ID2 = "bar", 2, 2
@pytest.fixture()
def free_... |
import os
import torch
from torchvision.datasets import CelebA, CIFAR10, LSUN, ImageFolder
from torch.utils.data import Dataset, DataLoader, random_split, Subset
from utils import CropTransform
import torchvision.transforms as transforms
import numpy as np
from tqdm import tqdm
import cv2
from PIL import Image
# Chang... |
# -*- coding: utf-8 -*-
"""
SSP Director
~~~~~~~~~~~~
Python client for Slideshow Pro's Director API.
:license: MIT License, see LICENSE for more details.
:documentation: See README.md for documentation.
"""
__version__ = '1.0'
try:
from urllib.request import urlopen
from urllib.parse i... |
import os
import argparse
import json
import re
from warnings import warn
from keyword import iskeyword
from collections import defaultdict
from jinja2 import Environment, FileSystemLoader
BASEDIR = os.path.dirname(__file__)
env = Environment(
loader=FileSystemLoader(f"{BASEDIR}/bindings_templates"), trim_blocks=... |
import unicodedata
import re
import random
import torch
from torch.autograd import Variable
# loading data files
# indexing words
# 一些标志符号(词)
PAD_token = 0
SOS_token = 1 # 句子起始
EOS_token = 2 # 句子结束
USE_CUDA = False
class Lang:
def __init__(self, name):
self.name = name
self.trimmed = False ... |
# Copyright 2016 Google Inc. All Rights Reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agree... |
"""
pygame-menu
https://github.com/ppizarror/pygame-menu
EXAMPLE - MULTI-INPUT
Shows different inputs (widgets).
"""
__all__ = ['main']
import pygame
import pygame_menu
from pygame_menu.examples import create_example_window
from typing import Tuple, Optional
# Constants and global variables
FPS = 60
WINDOW_SIZE = ... |
# Copyright 2016-2020 The <NAME> at the California Institute of
# Technology (Caltech), with support from the Paul Allen Family Foundation,
# Google, & National Institutes of Health (NIH) under Grant U24CA224309-01.
# All rights reserved.
#
# Licensed under a modified Apache License, Version 2.0 (the "License");
# you ... |
#
# Copyright (c) 2021, NVIDIA CORPORATION.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed ... |
# -*- coding: utf-8 -*-
"""
@author: clausmichele
"""
import time
import tensorflow as tf
import cv2
import numpy as np
from tqdm import tqdm
def SpatialCNN(input, is_training=False, output_channels=3, reuse=tf.AUTO_REUSE):
with tf.variable_scope('block1',reuse=reuse):
output = tf.layers.conv2d(input, 128, 3, padd... |
"""
Driver script to do NOx/HONO (post campaign) analysis
"""
#!/usr/bin/python
# - Packages
import numpy as np
from time import gmtime, strftime
import time
import glob
import AC_tools as AC
import sys
import pandas as pd
# import ARNA analysis/campaign code as a module
import arna as ar
def main():
"""
Main... |
#
# Author: <EMAIL>
#
from collections import defaultdict
from math import log
import string, itertools
import multiprocessing
def chunks(l, n):
""" Yield n successive chunks from l.
"""
newn = int(1.0 * len(l) / n + 0.5)
for i in range(0, n - 1):
yield l[i * newn:i * newn + newn]
yield l... |
from requests import Session
import logging
from typing import Iterator, Generator
from datetime import date
from gofiliate.lib import short_date_to_date, Figures, ListofFigures \
, GofiliateDataException, GofiliateException, GofiliateAuthException \
, AffiliateData, BaseWidgetReportRequest, AffiliateDetailsReq... |
#
# Write a symbol to python
#
import pybamm
# need numpy imported for code generated in EvaluatorPython
import numpy as np # noqa: F401
import scipy.sparse # noqa: F401
from collections import OrderedDict
def id_to_python_variable(symbol_id, constant=False):
"""
This function defines the format for the py... |
"""
.. _kw_generate:
Generate Keywords for SEM Campaigns
===================================
A big part of setting up SEM campaigns consists of generating keywords, and
properly mapping them to landing pages and ads, as well as putting them in the
right campaign and ad group structure.
Keyword research is the part o... |
#!/usr/bin/env python
# -*- coding: utf-8 -*-
#
# Generated from FHIR 4.0.0-a53ec6ee1b (http://hl7.org/fhir/StructureDefinition/Goal) on 2019-05-07.
# 2019, SMART Health IT.
from . import domainresource
class Goal(domainresource.DomainResource):
""" Describes the intended objective(s) for a patient, group or o... |
# -*- coding: utf-8 -*-
"""
Classes for downloading and working with Census API data.
"""
import os
import json
import collections
import re
import requests
import pandas as pd
from .util import check_response
CENSUS_BASE_URL = 'https://api.census.gov/data.json'
class CensusQuery(object):
"""
Download data f... |
# Copyright (c) Facebook, Inc. and its affiliates.
import logging
import warnings
from dataclasses import dataclass
from typing import Dict
import numpy as np
from mmf.common.registry import registry
from mmf.utils.configuration import get_global_config
from mmf.utils.dataset import dataset_list_from_config
from omeg... |
from __future__ import print_function
import googlemaps as gmaps
import networkx as nx
# import osmnx as ox
import pickle
import concurrent.futures
import math
import requests
import urllib
# Initiate cache
geocode_cache = {}
def getdistancematrix(coordinates, option=0):
'''
Args:
coordinates: list ... |
#!/usr/bin/env python3
# -*- coding: utf-8 -*-
from io import StringIO
import re
from hwt.interfaces.utils import addClkRstn
from hwt.simulator.simTestCase import SingleUnitSimTestCase
from hwt.simulator.utils import pprintInterface, pprintAgents
from hwt.synthesizer.interfaceLevel.emptyUnit import EmptyUnit
from hwt... |
import argparse
import os
import numpy as np
from tqdm import tqdm
import torch.backends.cudnn as cudnn
# from mypath import Path
from common import config
from data import make_data_loader
from model.sync_batchnorm.replicate import patch_replication_callback
from model.deeplab import *
from utils.loss import Segmentat... |
# This file is part of the pyMOR project (https://www.pymor.org).
# Copyright pyMOR developers and contributors. All rights reserved.
# License: BSD 2-Clause License (https://opensource.org/licenses/BSD-2-Clause)
"""Visualization of grid data using OpenGL.
This module provides a widget for displaying patch plots of
s... |
from data import DoomImage
import numpy as np
import time
from torch.utils.data import DataLoader
import tensorflow as tf
from tqdm import tqdm
from imageio import imwrite as imsave
from data import Places, PlacesRoom, PlacesOutdoor
from habitat_baselines.rl.models.resnet import ResNetEncoder
import habitat_baselines.r... |
"""
Author: <NAME>
"""
__license__ = """
Copyright 2015 Parse.ly, Inc.
Licensed under the Apache License, Version 2.0 (the "License");
you may not use this file except in compliance with the License.
You may obtain a copy of the License at
http://www.apache.org/licenses/LICENSE-2.0
Unless required by applicable ... |
# anvil_mods.py
import pandas as pd
import numpy as np
import shapely
import geopandas as gpd
import quandl
from fred import Fred
# demo api key
quandl.ApiConfig.api_key = "<KEY>"
def formatIndicatorLikeQuandl(indicator, **kwargs):
"""
Uses the FRED module to access data not included
in QUANDL's datas... |
__copyright__ = "Copyright (c) 2020 Jina AI Limited. All rights reserved."
__license__ = "Apache-2.0"
import base64
import os
import struct
import urllib.parse
import urllib.request
import zlib
import numpy as np
from . import BaseDriver
from .helper import guess_mime, array2pb, pb2array
class BaseConvertDriver(Ba... |
import pytest
import numpy as np
from encomp.units import Q
from encomp.fluids import Fluid, HumidAir, Water
from encomp.utypes import Density
def test_Fluid():
fld = Fluid('R123', P=Q(2, 'bar'), T=Q(25, '°C'))
assert fld.get('S') == Q(1087.7758824621442, 'J/(K kg)')
assert fld.D == fld.get('D')
w... |
"""
This module provides different kinds of iterators, all wrapped by the
DataIterator class which should generally be the only one used in practice.
The BaseIterator class allows "peeking" `checklines` lines into the data --
even if it's a consumable iterator -- in order to figure out what the dialect
is and therefor... |
"""
abc-classroom.template
======================
"""
import os
import shutil
from pathlib import Path
from . import config as cf
from . import github as gh
from . import utils
def new_update_template(args):
"""
Command line function that creates or updates an assignment template
repository. Implementat... |
import AST
import scanner
tokens = scanner.tokens
precedence = (
("nonassoc", "IFX"),
("nonassoc", "ELSE"),
("left", '=', 'ADDASSIGN', 'SUBASSIGN', 'MULASSIGN', 'DIVASSIGN'),
("left", '<', '>', 'LTE', 'GTE', 'NEQ', 'EQ'),
("left", '+', '-'),
("left", '*', '/'),
("left", 'DOTADD', 'DOTSUB')... |
# Copyright (c) 2011-2020, Lawrence Livermore National Security, LLC.
# Produced at the Lawrence Livermore National Laboratory
# Written by <NAME>, <NAME>, and <NAME>
# e-mail: <EMAIL>
# LLNL-CODE-507071
# All rights reserved.
# This file is part of PDV. For details, see <URL describing code and
# how to downlo... |
from __future__ import print_function
import numpy as np
import powderday.config as cfg
import yt
from yt.frontends.sph.data_structures import ParticleDataset
from yt.geometry.selection_routines import AlwaysSelector
import pdb
ParticleDataset.filter_bbox = True
ParticleDataset._skip_cache = True
def octree_zoom_bb... |
from __future__ import unicode_literals
from django.contrib.auth import authenticate, login
from django.http import JsonResponse
from django.http import Http404
from django.shortcuts import render, redirect
from django.views.decorators.csrf import csrf_exempt
from scipy.io import wavfile
from .forms import LoginForm, ... |
#coding:utf-8
import cv2
import numpy as np
import sys
import os
COLOR_BG = (255,0,0)
COLOR_FG = (0,255,0)
def mask2color(mask):
r,c = mask.shape[:2]
color = np.zeros((r,c,3),np.uint8)
color[np.where((mask==0)|(mask==2))] = COLOR_BG
color[np.where((mask==1)|(mask==3))] = COLOR_FG
return color
def... |
#!/usr/bin/env python
"""Auxiliary numerical tools
"""
from math import acos, pi, sqrt
from warnings import warn
#from . import log as log
import anuga.utilities.log as anuga_log
import numpy as num
#After having migrated to numpy we should use the native NAN.
#num.seterr(divide='warn')
num.seterr(divide='ignore') ... |
import numpy as np
import random
import time
import json
from model.model_wrapper import Models
from socketIO_client import SocketIO
from utils.model_dump import *
import os
import logging
import argparse
logging.getLogger('socketIO-client').setLevel(logging.WARNING)
random.seed(2018)
datestr = time.strftime('%m%d')... |
"""Live tests of common resource functionality.
We can use (almost) any resource here - Account is a convenient choice.
"""
import jwt
from stormpath.resources.base import Expansion
from .base import AccountBase
from .base import ApiKeyBase
class TestResource(AccountBase):
def test_dict_mixin(self):
_... |
from __future__ import division
from datetime import datetime
class Month(object):
def __init__(self,
date,
student_loans,
retirment,
down_payment):
self.date = date
self.student_loans = student_loans
self.retirement = re... |
# Copyright 2017 Intel Corporation
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in wri... |
from dataclasses import dataclass, field
from datetime import date as date_, datetime
from typing import ClassVar, List, NamedTuple, Optional, Union
from eventkit import Event
from loguru import logger
from base.contract import Contract, TagValue
from source.base.util import EPOCH, UNSET_DOUBLE, UNSET_INTEGER
logger.a... |
import copy
import numpy as np
import torch
class Memory:
def __init__(self, memory_size, nb_total_classes, rehearsal, fixed=True):
self.memory_size = memory_size
self.nb_total_classes = nb_total_classes
self.rehearsal = rehearsal
self.fixed = fixed
self.x = self.y = self... |
# pylint: disable=not-context-manager
# NOTE: The pylint not-content-manager warning is disabled pending the fix of
# a bug in pylint. See https://github.com/PyCQA/pylint/issues/782
"""Classes to handle Sonos UPnP Events and Subscriptions.
The `Subscription` class from this module will be used in
:py:mod:`soco.serv... |
from __future__ import with_statement, print_function, absolute_import
from itertools import *
from functools import *
import re
from copy import copy
import time
import numpy as np
from pandas import DataFrame
from stitch.core.utils import *
# ---------------------------------------------------------------------------... |
#!/usr/bin/env python
# -*- coding: utf-8 -*-
"""redistructure tests"""
import uuid
import unittest
import redistructures
# C0103 - invalid-name
# pylint: disable=C0103
class BaseTest(unittest.TestCase):
"""Base unittest class"""
def setUp(self):
"""Set up queue name"""
self.name = str(uuid.uui... |
#!/usr/bin/env python3
# -*- coding: utf-8 -*-
# @Author: <NAME>
# @Date: 2016-11-16 16:23:55
# @Last Modified by: <NAME>
# @Last Modified time: 2017-05-08 10:48:17
import numpy as np
import matplotlib.pyplot as plt
import pandas as pd
import seaborn as sns
import glob
import os
import functools
from pathlib impo... |
"""
parse_vcf.py
Utility functions to upload vcf files
"""
import re
import sys
import pymongo
import bson
import json
import vcf as py_vcf
from datetime import datetime
from helper import deep_update
from . import connection, db
def upload_vcf(vcf_file):
"""
Parse vcf files and upload variants usin... |
# -*- coding: utf-8 -*-
# Copyright (c) 2021, Teampro and contributors
# For license information, please see license.txt
from __future__ import unicode_literals
import frappe
from frappe.model.document import Document
class EyenorDatasheet(Document):
pass
@frappe.whitelist()
def get_header(doc):
data = ''
data +=... |
import logging
from cle.backends import Backend, Symbol, Segment, SymbolType
from cle.backends.relocation import Relocation
from cle.utils import ALIGN_UP
from cle.errors import CLEOperationError, CLEError
from cle.address_translator import AT
l = logging.getLogger(name=__name__)
class ExternSegment(Segment):
de... |
# -*- coding: utf-8 -*-
"""
Created on Wed Jun 26 18:29:41 2019
@author: <NAME>
"""
import cv2
from PIL import Image
import matplotlib.pyplot as plt
import tools
import numpy as np
from scipy import ndimage
#from keras.preprocessing.image import ImageDataGenerator, array_to_img, img_to_array, load_img
#%%
#images
#PS... |
'''VGG for CIFAR10. FC layers are removed.
(c) <NAME>
'''
import torch
import torch.nn as nn
import torch.nn.functional as F
import torch.utils.model_zoo as model_zoo
import math
import numpy as np
from mypath import Path
from torch.autograd import Variable
__all__ = [
'vgg19mlp'
]
# model_urls = {
# 'vgg11'... |
#!/usr/bin/env python
# -*- coding: utf-8 -*-
import sys
import time
import itertools
import re
import os
from .TAD import TAD
from .estructuras_de_datos import Pila,Nodo,Arbol
# Procedimiento que construye un árbol a partir de su representación como paréntesis anidado
def parentesis_a_arbol_etiquetado(parentesis,eti... |
#!/usr/bin/env python
"""
Licensed under the Apache License, Version 2.0 (the "License");
you may not use this file except in compliance with the License.
You may obtain a copy of the License at
http://www.apache.org/licenses/LICENSE-2.0
Unless required by applicable law or agreed to in writing, software
distribute... |
from __future__ import division
import numpy as np
import climlab
import pytest
from climlab.radiation.rrtm import _climlab_to_rrtm, _rrtm_to_climlab
from climlab.tests.xarray_test import to_xarray
num_lev = 30
@pytest.mark.compiled
@pytest.mark.fast
def test_rrtmg_lw_creation():
state = climlab.column_state(num_... |
import torch
from torch.autograd import Variable
from torch.nn import functional as F
print(torch.__version__)
import torch.nn as nn
import torch.autograd as autograd
from generative_playground.utils.gpu_utils import to_gpu, FloatTensor
from generative_playground.data_utils.to_one_hot import to_one_hot
class LSTMMode... |
#!/usr/bin/env python
"""Hooks for git that perform linting.
This file contains two git hooks:
1. A commit-msg hook, to lint the commit message. If lint fails, the commit
is aborted, and the message is saved in a temporary file.
2. A pre-push hook, to lint files that will remotely change as a result of the
push... |
# white_signals.py
"""Contains class factories for white noise signals. White noise signals are
defined as the class of signals that only modifies the white noise matrix `N`.
"""
from __future__ import absolute_import, division, print_function, unicode_literals
import numpy as np
import scipy.sparse
from enterprise.... |
import os
import pysam
import pyfastaq
from clockwork import utils
class Error (Exception): pass
class ContamRemover:
'''Takes a BAM file in read name order (ie has not been sorted by reference).
The reference should have sequence(s) that we want, and the rest are assumed to
be contamination.
... |
import numpy as np
from itertools import combinations
import dask.array as dsa
from ..core import (
histogram,
_ensure_correctly_formatted_bins,
_ensure_correctly_formatted_range,
)
from .fixtures import empty_dask_array
import pytest
bins_int = 10
bins_str = "auto"
bins_arr = np.linspace(-4, 4, 10)
ra... |
#!/usr/bin/env python
"""Implementation of Closed-Form Matting.
This module implements natural image matting method described in:
<NAME>, <NAME>, and <NAME>. "A closed-form solution to natural image matting."
IEEE Transactions on Pattern Analysis and Machine Intelligence 30.2 (2008): 228-242.
The code can be... |
#K-means Clustering
#%reset -f
#Importing Libraries
import numpy as np
import pandas as pd
import matplotlib.pyplot as plt
import seaborn as sns
from sklearn.cluster import DBSCAN
from pyclustertend import hopkins
from sklearn.cluster import MeanShift, estimate_bandwidth
from sklearn.metrics import silhouette_score
#I... |
"""Tests pertaining to the `signal_analog.detectors` module."""
import re
import pytest
import requests
import betamax
from betamax_serializers import pretty_json
from email_validator import EmailNotValidError
from signal_analog.combinators import Div, GT, LT
from signal_analog.flow import Assign, Data, Detect, Progr... |
# --------------------------------------------------------
# SoCo
# Copyright (c) 2021 Microsoft
# Licensed under The MIT License [see LICENSE for details]
# Written by <NAME>
# --------------------------------------------------------
import json
import os
import time
import torch
import torch.backends.cudnn as cudn... |
from django.db.models import Q
from rest_framework import serializers
from rest_framework.exceptions import ValidationError
from care.facility.api.serializers import TIMESTAMP_FIELDS
from care.facility.api.serializers.facility import FacilityBasicInfoSerializer
from care.facility.api.serializers.patient import Patient... |
from django.core.exceptions import ValidationError
from django.db.models import Q
from django.forms import widgets
from django.forms.fields import BooleanField, ChoiceField, MultipleChoiceField
from django.utils.safestring import mark_safe
from django.utils.text import format_lazy
from django.utils.translation import n... |
import json
import numpy as np
import matplotlib.pyplot as plt
import os
import yaml
from sklearn.metrics import f1_score, roc_auc_score
from fcos_core.config.paths_catalog import DatasetCatalog
from Data.Preprocess import join_path
def compute_iou(box1, box2):
"""
Compute IoU between two boxes.... |
#encoding: utf-8
from fastai.conv_learner import *
class DPNConvnetBuilder():
"""
# Args
ps: float list, dropout rate of dense layers
"""
def __init__(self, f,
n_classes,
is_multi,
is_reg,
ps=None,
xtra_fc=Non... |
"""
Lidar
"""
# requies glob to be installed: "pip3 install glob2"
# requires rplidar to be installed: "pip3 install rplidar"
import time
import math
import pickle
import serial
import numpy as np
from donkeycar.utils import norm_deg, dist, deg2rad, arr_to_img
from PIL import Image, ImageDraw
class RPLidar(object):
... |
# Authors:
# <NAME> <<EMAIL>>
# <NAME> <<EMAIL>>
#
# License: BSD 3 clause
"""
Simulate the lid driven cavity
dt rho + dx qx + dy qy = 0
dt qx + dx (qx^2/rho + c^2 rho) + dy (qx*qy/rho) = 0
dt qy + dx (qx*qy/rho) + dy (qy^2/rho + c^2 rho) = 0
"""
import numpy as np
import sympy as sp
import matplotlib.pyplot... |
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