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# -*- coding: utf-8 -*- # # PySceneDetect: Python-Based Video Scene Detector # --------------------------------------------------------------- # [ Site: http://www.bcastell.com/projects/PySceneDetect/ ] # [ Github: https://github.com/Breakthrough/PySceneDetect/ ] # [ Documentation: http://py...
import os import random from functools import partial from itertools import chain, product from collections import Container, namedtuple import warnings import math from gbdxtools.rda.io import to_geotiff from gbdxtools.rda.util import RatPolyTransform, AffineTransform, pad_safe_positive, pad_safe_negative, RDA_TO_DTY...
""" Functions for visibility coalescence and decoalescence. The BlockVisibility format describes the visibility data_models as it would come from the correlator: [time, ant2, ant1, channel, pol]. This is well-suited to calibration and some visibility processing such as continuum removal. However the BlockVisibility fo...
# -*- coding: utf-8 -*- ''' Neural Network model under POM1. ''' __author__ = "<NAME>" __date__ = "February 2021" import os os.environ['TF_CPP_MIN_LOG_LEVEL'] = '3' # Disables tensorflow warnings # Code to ensure reproducibility in the results from numpy.random import seed seed(1) from tensorflow.com...
# -*- coding: utf-8 -*- """ Created on Nov 24, 2014 @author: moloch Copyright 2014 Root the Box Licensed under the Apache License, Version 2.0 (the "License"); you may not use this file except in compliance with the License. You may obtain a copy of the License at http://www.apache.org/licen...
import settings import helpers import sys import os import glob import random import pandas import ntpath import cv2 import numpy from typing import List, Tuple from keras.optimizers import Adam, SGD from keras.layers import Input, Convolution2D, MaxPooling2D, UpSampling2D, merge, Convolution3D, MaxPooling3...
import numpy as np import cv2 import threading from importlib import import_module import os from flask import Flask, render_template, Response from multiprocessing import Process, Manager import time from utils import cpu_temperature # from rgb_matrix import RGB_Matrix app = Flask(__name__) @app.route('/') def index...
# This file is part of the Python aiocoap library project. # # Copyright (c) 2012-2014 <NAME> <http://sixpinetrees.blogspot.com/>, # 2013-2014 <NAME> <<EMAIL>> # # aiocoap is free software, this file is published under the MIT license as # described in the accompanying LICENSE file. """A plain CoAP resou...
import enum import os.path from glob import glob from dataclasses import dataclass from enum import Enum, auto from generalsmodbuilder.data.common import ParamsT, VerifyParamsType from generalsmodbuilder.util import JsonFile from generalsmodbuilder import util class BundleEventType(Enum): OnPreBuild = auto() ...
""" Tools for getting and setting install names """ from subprocess import Popen, PIPE import os from os.path import join as pjoin, relpath, isdir, exists import zipfile import re import stat import time class InstallNameError(Exception): pass def back_tick(cmd, ret_err=False, as_str=True, raise_err=None): ...
# Copyright (c) Jupyter Development Team. # Distributed under the terms of the Modified BSD License. """Interact with functions using widgets.""" from __future__ import print_function from __future__ import division try: # Python >= 3.3 from inspect import signature, Parameter except ImportError: from IPyth...
# Copyright 2020 The Chromium Authors. All rights reserved. # Use of this source code is governed by a BSD-style license that can be # found in the LICENSE file. """Classes to manage cached values. Monorail makes full use of the RAM of GAE frontends to reduce latency and load on the database. Even though these caches...
#!/usr/bin/env python3 # -*- coding: utf-8 -*- """ Created on Thu Mar 25 15:54:09 2021 @author: emi """ # ------------------------------------------------------------------------ # # Copyright (c) 2019 <NAME>., <NAME>., <NAME>. # # # # Licensed u...
# coding=utf-8 import os import re import subprocess import unittest import pytest import six from mock import patch from parameterized import parameterized from conans.client import tools from conans.client.tools.scm import Git from conans.errors import ConanException from conans.test.utils.scm import create_local_g...
from __future__ import print_function import os import argparse import torch import torch.nn as nn import torch.nn.functional as F import torchvision from torch.autograd import Variable import torch.optim as optim from torchvision import datasets, transforms from models.wideresnet import * from models.resnet import * f...
# --- # jupyter: # jupytext: # formats: py:light # text_representation: # extension: .py # format_name: light # format_version: '1.5' # jupytext_version: 1.11.3 # kernelspec: # display_name: Python 3 # language: python # name: python3 # --- import pandas as pd import num...
##!/usr/bin/python ''' Import modules ''' import socket import time import fcntl import re import os import errno import struct import signal import sys from collections import OrderedDict import logging from time import sleep import datetime import json #log file configuration logfile = '/var/log/YeeLight.log' #con...
#!/usr/bin/python # -*- coding: utf-8 -*- # Copyright: (c) 2012, <NAME> <<EMAIL>> # Sponsored by Four Kitchens http://fourkitchens.com. # GNU General Public License v3.0+ (see COPYING or https://www.gnu.org/licenses/gpl-3.0.txt) from __future__ import absolute_import, division, print_function __metaclass__ = type AN...
# Copyright 2020 by <NAME>, <NAME>, <NAME>, <NAME>, and <NAME> # This software is distributed under the 3-clause BSD License. # Utility functions for mmw, sequantial sampling and sample trees import os import math import importlib import numpy as np import mpisppy.MPI as mpi import pyomo.environ as pyo import mpisppy...
import keras from keras.models import Sequential, Model, load_model from keras.layers import Dense, Dropout, Activation, Flatten, Input, Lambda from keras.layers import Conv2D, MaxPooling2D, BatchNormalization, Concatenate, Reshape, Softmax from keras import backend as K import keras.losses import os import pickle...
"""Tools for plotting.""" import time import matplotlib as mpl import numpy as np from matplotlib import pyplot as plt from matplotlib import ticker from matplotlib.animation import FuncAnimation from matplotlib.ticker import MaxNLocator from mpl_tools import place from numpy import arange, array from patlib.std impo...
#! /usr/bin/env python3 from argparse import ArgumentParser import csv from datetime import datetime import json from matplotlib import pyplot as plt from pathlib import Path import clr import cmsmodel def main(): # Most of this is ignored because we pass explicit values into solvers.CreateSolver() below. Real...
#!/usr/bin/env python # encoding: utf-8 # # Stylus, Copyright 2006-2009 Biologic Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. # You may obtain a copy of the License at # # http://www.apache.org/licenses/LICENSE-2....
# Scangen: # written by <NAME> # email: <EMAIL> # License - Free for non-commercial, educational use. # (c) 2016 # This program may be used in part or its entirety for non-commercial, educational # purposes. import sys import stack import state import nfastate import streamreader import orderedcollections epsilon = "...
""" Defines Configuration, YamlLoader and relevant Enums, which parses and validates a given yaml config. """ # Authors: <NAME> <<EMAIL>> # License: MIT from enum import Enum, unique, auto from typing import List, Dict, Optional from emerge.metrics.numberofmethods.numberofmethods import NumberOfMethodsMetric from em...
#!/usr/bin/python3 """ Module to run the camera in video mode with up to 4 differently purposed streams. each stream can be independently started and stopped. The 4 streams are intended to be used for any combination of: streaming live video - simply using mjpeg watching for movement - continuously capture (f...
#!/usr/bin/python # Copyright (c) 2017-2019 Forcepoint ANSIBLE_METADATA = { 'metadata_version': '1.1', 'status': ['preview'], 'supported_by': 'community' } DOCUMENTATION = ''' --- module: firewall_nat_rule short_description: Create, modify or delete a firewall NAT rule description: - Firewall NAT rules...
from __future__ import absolute_import from __future__ import division from __future__ import print_function import functools import operator from collections import defaultdict import numpy as np from . import duck_array_ops from . import dtypes from . import utils from .indexing import get_indexer from .pycompat im...
import random import os import csv from PIL import Image from tqdm import tqdm import torch import numpy as np import random import matplotlib.pyplot as plt from matplotlib.offsetbox import OffsetImage, AnnotationBbox def opencsv(filename): """ Open a csv file and return the content as a list of lists. Ar...
################################################################################ # Copyright 2020-2021 Intel Corporation # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. # You may obtain a copy of the License at # # http://www.apa...
'''Utilities for patching in cassettes''' import functools import itertools from .compat import contextlib, mock from .stubs import VCRHTTPConnection, VCRHTTPSConnection from six.moves import http_client as httplib # Save some of the original types for the purposes of unpatching _HTTPConnection = httplib.HTTPConnect...
import os import sys import parmed as pmd import numpy as np import argparse babel = '/u/fd/ball4935/.linuxbrew/bin/babel' antechamber = '/u/fd/ball4935/opt/amber18/bin/antechamber' parmchk = '/u/fd/ball4935/opt/amber18/bin/parmchk2' leaprc_forcefield_file = '/u/fd/ball4935/opt/amber18/dat/leap/cmd/leaprc.gaff2' tleap...
# Copyright 2017-present Kensho Technologies, LLC. from collections import OrderedDict from datetime import date, datetime from decimal import Decimal from hashlib import sha256 from itertools import chain from typing import Any, FrozenSet, Iterable import arrow from graphql import ( DirectiveLocation, GraphQL...
# Copyright 2016, 2019 <NAME>. All Rights Reserved. # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. # You may obtain a copy of the License at # # https://www.apache.org/licenses/LICENSE-2.0 # # Unless required by applicable law or ag...
import re import base64 from roscraco.router.base import RouterBase from roscraco.helper import validator, converter from roscraco.exception import RouterParseError, RouterIdentityError from roscraco.response import RouterInfo, TrafficStats, DMZSettings, \ ConnectedClientsListItem, ConnectedClientsList, Wireles...
# OpenPCDet PyTorch Dataloader and Evaluation Tools for Waymo Open Dataset # Reference https://github.com/open-mmlab/OpenPCDet # Written by <NAME>, <NAME> # All Rights Reserved 2019-2020. import os import pickle import copy import numpy as np import torch import multiprocessing import SharedArray import to...
""" Copyright 2015 Google, Inc. Licensed under the Apache License, Version 2.0 (the "License"); you may not use this file except in compliance with the License. You may obtain a copy of the License at http://www.apache.org/licenses/LICENSE-2.0 Unless required by applicable law or agreed to in writing, software di...
import torch from torch.autograd import Variable import torch.nn.functional as F from tqdm import tqdm import statistics import torchvision.utils as vutils from icecream import ic from models_def.models_brdf import LSregressDiffSpec # def get_im_input(data_batch, opt, return_input_batch_as_list=False) def get_labels...
from __future__ import print_function import argparse import torch import torch.nn as nn import torch.nn.functional as F import torch.optim as optim from torchvision import datasets, transforms from torch.autograd import Variable import numpy as np from utils import * from taskcv_loader import CVDataLoader from basenet...
"""This module defines :class:`hyperparameter_hunter.metrics.ScoringMixIn` which enables :class:`hyperparameter_hunter.experiments.BaseExperiment` to score predictions and collect the results of those evaluations Related ------- :mod:`hyperparameter_hunter.experiments` This module uses :class:`hyperparameter_hunte...
# # Copyright (c) 2018 Intel Corporation # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. # You may obtain a copy of the License at # # http://www.apache.org/licenses/LICENSE-2.0 # # Unless required by applicable law or agreed to...
#!/usr/bin/env python3 ################################################################################################### ## SDI TAPAS python demo application - communication module ## ## Revisions: ## 1.0 - Initial version ## ## Copyright (c) 2017 Siemens AG # Redistribution and use in source and binary forms, with...
""" Tagulous test: django migrations Modules tested: tagulous.models.migrations """ from __future__ import absolute_import from __future__ import print_function from __future__ import unicode_literals from importlib import import_module import os import sys import shutil import warnings import django from django....
import pyedflib import numpy as np import pandas as pd import math import scipy.signal as signal from scipy.signal import hilbert import arrow from datetime import datetime as dt from datetime import timedelta as td from bs4 import BeautifulSoup import matplotlib.pyplot as plt def get_edf_signal_indices(f, sign...
#!/usr/bin/env python # # Based on code by <NAME> <<EMAIL>> # Rev: 1139; Date: 2008-04-16 # (see license text in pathos.pp_map) # # Forked by: <NAME> (April 2008) # Author: <NAME> (mmckerns @caltech and @uqfoundation) # Copyright (c) 2008-2016 California Institute of Technology. # Copyright (c) 2016-2021 The Uncertaint...
import os import shutil from functools import reduce from pathlib import Path import datajoint as dj import numpy as np import spikeinterface as si import spikeinterface.extractors as se import spikeinterface.toolkit as st import probeinterface as pi from ..common.common_device import Probe from ..common.common_ephys...
""" Transformer used to apply basic transformations on MRI data. """ # Author: <NAME>, <NAME> # License: simplified BSD import warnings from copy import copy as copy_object from functools import partial from joblib import Memory from .base_masker import BaseMasker, _filter_and_extract from .. import _utils from .. i...
import abc from collections import namedtuple from enum import Enum import six from dagster import check from dagster.core.errors import DagsterError from dagster.core.host_representation import ExternalSchedule from dagster.core.instance import DagsterInstance from dagster.core.origin import ScheduleOrigin from dags...
""" problog.dd_formula - Decision Diagrams -------------------------------------- Common interface to decision diagrams (BDD, SDD). .. Part of the ProbLog distribution. Copyright 2015 <NAME>, DTAI Research Group Licensed under the Apache License, Version 2.0 (the "License"); you may not use this fil...
# -*- coding: utf-8 -*- from xBot import * from multiprocessing import Pool, Process from subprocess import check_output from datetime import datetime from threading import Thread from time import sleep from bs4 import BeautifulSoup import time, random, pytz, atexit, ctypes, livejson, sys, shutil, json, codecs, ast, th...
import sys sys.path.append(".") import numpy as np from dctree.core.basemodel import BaseModel def mode(array:np.ndarray,return_percents=False): """ Return an array of modal values """ uniques, counts = np.unique(array, return_counts=True) modes = uniques[counts == np.amax(counts)] if return_pe...
""" For information on the Elsevier API, see: - API Specification: http://dev.elsevier.com/api_docs.html - Authentication: https://dev.elsevier.com/tecdoc_api_authentication.html """ from __future__ import absolute_import, print_function, unicode_literals from builtins import dict, str import os import re import l...
import re from genie.metaparser import MetaParser from genie.metaparser.util.schemaengine import Schema, Any, Optional class ShowRouteMapAllSchema(MetaParser): """Schema for show route-map all""" schema = { Any(): {Optional('description'): str, 'statements': ...
#!/usr/bin/env python # Scatter3: binary scattering package replicating most of the # functionality of the scatter3 tool in Starlab. See McMillan & Hut # 1996, ApJ, 467, 348. import sys, unittest, numpy, random, collections, getopt, os, math from time import * from amuse.units import nbody_system from amuse.units ...
#!/usr/bin/env python3 import stanza import sys from aima3.logic import expr from aima3.logic import FolKB import aima3.logic as aima import num2words import re from collections import defaultdict import os import re # stanza.download('en') def get_subtree(sent, id): # RETURN A LIST OF IDS forThePhrase = [] ...
# coding=utf-8 # Copyright 2019 The Google Research Authors. # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. # You may obtain a copy of the License at # # http://www.apache.org/licenses/LICENSE-2.0 # # Unless required by applicab...
import numpy as np import torch import torch.nn as nn import torch.nn.functional as F from torch.utils.data import DataLoader,Dataset import one_torch_utils as otu from torchvision import datasets, transforms import os import cv2 from PIL import Image import itertools import glob import random from torchvision.utils im...
#!/usr/bin/env python """ What ---- vbench is a library which can be used to benchmark the performance of a codebase over time. Although vbench can collect data over many commites, generate plots and other niceties, for Pull-Requests the important thing is the performance of the HEAD commit against a known-good baseli...
# Copyright (c) 2021, NVIDIA CORPORATION & AFFILIATES. All rights reserved. # # NVIDIA CORPORATION and its licensors retain all intellectual property # and proprietary rights in and to this software, related documentation # and any modifications thereto. Any use, reproduction, disclosure or # distribution of this sof...
# BSD Licence # Copyright (c) 2010, Science & Technology Facilities Council (STFC) # All rights reserved. # # See the LICENSE file in the source distribution of this software for # the full license text. """ A framework for translating DRS objects to and from filenames and paths. This module is very object-heavy and ...
# Stack manipulations # Author: <NAME>, 2017, 2019 """Import and export image stacks in various formats. """ import os import glob import numpy as np from skimage import transform from skimage import io from matplotlib import animation from scipy import ndimage from magmap.cv import chunking from magmap.plot import ...
# Copyright 2017 Google Inc. All Rights Reserved. # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. # You may obtain a copy of the License at # # http://www.apache.org/licenses/LICENSE-2.0 # # Unless required by applicable law or ...
''' Soft Actor-Critic version 1 using state value function: 1 V net, 1 target V net, 2 Q net, 1 policy net paper: https://arxiv.org/pdf/1801.01290.pdf ''' import math import random import gym import numpy as np import torch import torch.nn as nn import torch.optim as optim import torch.nn.functional as F from torch...
import math import torch import torch.nn as nn import torch.nn.functional as F import numpy as np from torch.autograd import Variable from pdb import set_trace as breakpoint class LinearDiag(nn.Module): def __init__(self, num_features, bias=False): super(LinearDiag, self).__init__() weight = torch...
#/usr/bin/python __version__ = '1.0' __author__ = '<EMAIL>' ## ## Generals import os import sys import errno import shutil import subprocess import logging as log ## ## Backend junk from ..__backend import Colour as clr from ..seq_qc.__quality_control import THREADS import warnings; warnings.simplefilter("ignore") ##...
#!/usr/bin/python # # Copyright 2020 Google LLC # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. # You may obtain a copy of the License at # # http://www.apache.org/licenses/LICENSE-2.0 # # Unless required by applicable law or ag...
# python import os import collections # from itertools import cycle import logging logging.basicConfig(level=logging.WARNING) from ast import literal_eval #import warnings ######################################################### ## data import pandas as pd import numpy as np import networkx as nx ##################...
import numpy as np import os import pickle as pl import tables import h5py from scipy.constants import c, pi import gc from mpl_toolkits.axes_grid1.axes_divider import make_axes_locatable from data_plotters_animators import read_variables from functions import * import warnings warnings.filterwarnings('ignore') import...
DATASET_DIR = '/home/ds/Projects/SARA/datasets/fields_segmentation' SRC_IMAGES_PREFIX = '/home/ds/Projects/SARA/data/generated_images/document_crops_rotated/' DST_IMAGES_PREFIX = '/home/ds/Projects/SARA/data/generated_images/fields_segm_resize_640_v1/' SRC_MASKS_PREFIX = '/home/ds/Projects/SARA/annotations/fields_segme...
import numpy as np import pytest import psyneulink as pnl import psyneulink.core.llvm as pnlvm import psyneulink.core.components.functions.stateful.integratorfunctions as Functions from psyneulink.core.components.functions.function import FunctionError from psyneulink.core.components.functions.nonstateful.transferfun...
""" This module implements the `se interactive-replace` command. """ import argparse import curses from pathlib import Path import os from math import floor from typing import Tuple import regex import se TAB_SIZE = 8 def _get_text_dimensions(text: str) -> Tuple[int, int]: """ Get the number of rows and column...
#!/usr/bin/python3 # -*- coding=utf-8 -*- """Data process utility functions.""" import numpy as np import random from PIL import Image, ImageEnhance import cv2 #from matplotlib.colors import rgb_to_hsv, hsv_to_rgb def rand(a=0, b=1): return np.random.rand()*(b-a) + a def letterbox_resize(image, target_size, ret...
#!/usr/bin/env python # This will (hopefully) be the code to extract symmetry operations # from Hall symbols ''' Code from https://github.com/atztogo/spglib/tree/master/database Originally created by <NAME>. Modified by <NAME> for python 3 compatibility. ''' import numpy as np lattice_symbols = { 'P': [ [ 0, 0,...
from __future__ import print_function, unicode_literals from collections import namedtuple import six from attr import attrs, attrib from attr.validators import instance_of, provides from automat import MethodicalMachine from zope.interface import Interface, implementer from twisted.python import log from twisted.inter...
""" Ensemble classifiers http://en.wikipedia.org/wiki/Ensemble_learning Current implementations use gating for training ensemble methods. Each gating function expects as input a special kind of :class:`~pySPACE.resources.data_types.prediction_vector.PredictionVector`: Each component in the vector should correspond ...
""" Finite Discrete Random Variables Module See Also ======== sympy.stats.frv_types sympy.stats.rv sympy.stats.crv """ from __future__ import print_function, division import random from itertools import product from sympy import (Basic, Symbol, cacheit, sympify, Mul, And, Or, Tuple, Piecewise, Eq,...
"""Groups views.""" from collections import OrderedDict from json import dumps import logging from django.contrib import messages from django.contrib.auth import get_user_model from django.core.cache import cache from django.core.exceptions import PermissionDenied from django.core.urlresolvers import reverse from djan...
import logging import numpy as np import scipy.sparse import tensorflow as tf from sklearn.model_selection import train_test_split from typing import Optional, Dict, Text, List, Tuple, Any, Union, Generator, NamedTuple from collections import defaultdict from rasa.utils.tensorflow.constants import BALANCED, SEQUENCE ...
#!/usr/bin/env python3 # -*- coding:utf-8 -*- """ @version: V0.1 @license: MIT Licence @author: danquxunhuan @mail: <EMAIL> @project: tello @file: detector.py @create time: 18-12-30 11:50 @description: """ import math import os import time import cv2 import numpy as np import tensorflow as tf from config...
#!/usr/bin/env python3.6 # -*- coding: utf-8 -*- import argparse import collections import json import os import random import time from typing import Dict, Tuple from collections import Counter from tabulate import tabulate import torch from tensorboardX import SummaryWriter from torch import nn, optim from torchte...
#!/usr/bin/env python # -*- coding:utf-8 -*- from __future__ import print_function from __future__ import unicode_literals import io import json import logging import os import sys from jinja2 import FileSystemLoader, Environment import nbformat from notebook.base.handlers import IPythonHandler, APIHandler from note...
from __future__ import annotations import abc from collections import defaultdict from typing import Any, Optional def cap_feature(s): """ Capitalization feature: 0 = low caps 1 = all caps 2 = first letter caps 3 = one capital (not first letter) """ if s.lower() == s: return "...
r""" Custom Dataset module. Consist of Dataset that designed for different tasks. """ import cv2 import json import torch import random import numpy as np from tqdm import tqdm from pathlib import Path from torch.utils.data import Dataset from .log import LOGGER from .bbox import xywhn2xyxy, xyxy2xywhn, rescale_xywh...
import boto3 import datetime from synapseclient import Synapse from synapseclient.core import sts_transfer from synapseclient.core.sts_transfer import StsTokenStore, _TokenCache, with_boto_sts_credentials from synapseclient.core.utils import datetime_to_iso import pytest from unittest import mock class TestGetStsC...
from __future__ import unicode_literals import json import re from .common import InfoExtractor from ..compat import compat_HTTPError from ..utils import ( ExtractorError, int_or_none, parse_age_limit, traverse_obj, ) class ViewLiftBaseIE(InfoExtractor): _API_BASE = 'https://prod-api.viewlift.co...
r""" Huffman Encoding This module implements functionalities relating to Huffman encoding and decoding. AUTHOR: - <NAME> (2010-05): initial version. Classes and functions ===================== """ ########################################################################### # Copyright (c) 2010 <NAME> <<EMAIL>> # #...
from collections import defaultdict import os import re import pygame from pygame.locals import * import pygame_gui SCREENSIZE = (1024,640) WHITE = pygame.Color(255,255,255,255) BLACK = pygame.Color(0,0,0,255) BACKGROUND = pygame.Color(96,96,128,255) MASKED = pygame.Color(0,128,0,0) SCALE = 10 ISOWIDTH = 40 ISOH...
# # Licensed to the Apache Software Foundation (ASF) under one or more # contributor license agreements. See the NOTICE file distributed with # this work for additional information regarding copyright ownership. # The ASF licenses this file to You under the Apache License, Version 2.0 # (the "License"); you may not us...
""" Written by <NAME>, 2019 Some functions are adapted from <NAME> Original source: https://github.com/rowanz/neural-motifs/blob/master/lib/evaluation/sg_eval.py """ import os import numpy as np import logging from six.moves import cPickle as pickle import json import csv from tqdm import tqdm from core.config import...
# Copyright 2012 Google Inc. All Rights Reserved. # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. # You may obtain a copy of the License at # # http://www.apache.org/licenses/LICENSE-2.0 # # Unless required by applicable law or ...
#!/usr/bin/env python3 """ Utilities for manipulating coordinates or list of coordinates, under periodic boundary conditions or otherwise. Many of these are heavily vectorized in numpy for performance. """ # adapted from original version in pymatgen version from pymatgen import numpy as np import math def small_fra...
""" DAQmx (National Instruments, :mod:`fluidlab.instruments.daq.daqmx`) =================================================================== .. todo:: DAQmx interface and drivers (using Comedi API?)... Provides: .. autofunction:: read_analog .. autofunction:: write_analog .. autofunction:: write_analog_end_task .....
# # Copyright 2016 The BigDL Authors. # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. # You may obtain a copy of the License at # # http://www.apache.org/licenses/LICENSE-2.0 # # Unless required by applicable law or agreed to in ...
# Licensed under the Apache License, Version 2.0 (the "License"); you may # not use this file except in compliance with the License. You may obtain # a copy of the License at # # http://www.apache.org/licenses/LICENSE-2.0 # # Unless required by applicable law or agreed to in writing, software # d...
# -*- encoding:ascii -*- from mako import runtime, filters, cache UNDEFINED = runtime.UNDEFINED __M_dict_builtin = dict __M_locals_builtin = locals _magic_number = 6 _modified_time = 1433361600.0885601 _template_filename='templates/admin/tool_shed_repository/select_tool_panel_section.mako' _template_uri='/admin/tool_sh...
# coding: utf-8 # /*########################################################################## # Copyright (C) 2004-2021 <NAME>, European Synchrotron Radiation Facility # # This file is part of the PyMca X-ray Fluorescence Toolkit developed at # the ESRF by the Software group. # # Permission is hereby granted, free of ...
#!/usr/bin/env python # # Copyright 2007 Google Inc. # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. # You may obtain a copy of the License at # # http://www.apache.org/licenses/LICENSE-2.0 # # Unless required by applicable law o...
r""" Generic Convolution Asymptotically fast convolution of lists over any commutative ring in which the multiply-by-two map is injective. (More precisely, if `x \in R`, and `x = 2^k*y` for some `k \geq 0`, we require that `R(x/2^k)` returns `y`.) The main function to be exported is convolution(). EXAMPLES:: sa...
""".. Line to protect from pydocstyle D205, D400. RNA maps -------- Distribution of cross-links relative to genomic landmarks. What is an RNA-map? ^^^^^^^^^^^^^^^^^^^ Imagine the following situation (on positive strand):: |---intron1---||---exon2---||---intron2---||---exon3---| x|...
import numpy as np from numpy import ma import pandas as pd from scipy import sparse as sp from anndata import AnnData def test_creation(): AnnData(np.array([[1, 2], [3, 4]])) AnnData(np.array([[1, 2], [3, 4]]), {}, {}) AnnData(ma.array([[1, 2], [3, 4]]), uns={'mask': [0, 1, 1, 0]}) AnnData(sp.eye(2)...