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robust-transformers | robust-transformers-main/examples/pytorch/question-answering/run_qa_beam_search_no_trainer.py | #!/usr/bin/env python
# coding=utf-8
# Copyright 2021 The HuggingFace Inc. team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
"""
Fine-tuning XLNet for question answering with beam search using 🤗 Accelerate.
"""
# You can also adapt this script on your own question answering task. Pointers for this are left as comments.
import argparse
import logging
import math
import os
import random
from pathlib import Path
import datasets
import numpy as np
import torch
from datasets import load_dataset, load_metric
from torch.utils.data import DataLoader
from tqdm.auto import tqdm
import transformers
from accelerate import Accelerator
from huggingface_hub import Repository
from transformers import (
AdamW,
DataCollatorWithPadding,
EvalPrediction,
SchedulerType,
XLNetConfig,
XLNetForQuestionAnswering,
XLNetTokenizerFast,
default_data_collator,
get_scheduler,
set_seed,
)
from transformers.file_utils import get_full_repo_name
from transformers.utils import check_min_version
from transformers.utils.versions import require_version
from utils_qa import postprocess_qa_predictions_with_beam_search
# Will error if the minimal version of Transformers is not installed. Remove at your own risks.
check_min_version("4.18.0.dev0")
require_version("datasets>=1.8.0", "To fix: pip install -r examples/pytorch/question-answering/requirements.txt")
logger = logging.getLogger(__name__)
def parse_args():
parser = argparse.ArgumentParser(description="Finetune a transformers model on a Question Answering task")
parser.add_argument(
"--dataset_name",
type=str,
default=None,
help="The name of the dataset to use (via the datasets library).",
)
parser.add_argument(
"--dataset_config_name",
type=str,
default=None,
help="The configuration name of the dataset to use (via the datasets library).",
)
parser.add_argument(
"--train_file", type=str, default=None, help="A csv or a json file containing the training data."
)
parser.add_argument(
"--preprocessing_num_workers", type=int, default=4, help="A csv or a json file containing the training data."
)
parser.add_argument("--do_predict", action="store_true", help="Eval the question answering model")
parser.add_argument(
"--validation_file", type=str, default=None, help="A csv or a json file containing the validation data."
)
parser.add_argument(
"--test_file", type=str, default=None, help="A csv or a json file containing the Prediction data."
)
parser.add_argument(
"--max_seq_length",
type=int,
default=384,
help="The maximum total input sequence length after tokenization. Sequences longer than this will be truncated,"
" sequences shorter will be padded if `--pad_to_max_lengh` is passed.",
)
parser.add_argument(
"--pad_to_max_length",
action="store_true",
help="If passed, pad all samples to `max_seq_length`. Otherwise, dynamic padding is used.",
)
parser.add_argument(
"--model_name_or_path",
type=str,
help="Path to pretrained model or model identifier from huggingface.co/models.",
required=True,
)
parser.add_argument(
"--per_device_train_batch_size",
type=int,
default=8,
help="Batch size (per device) for the training dataloader.",
)
parser.add_argument(
"--per_device_eval_batch_size",
type=int,
default=8,
help="Batch size (per device) for the evaluation dataloader.",
)
parser.add_argument(
"--learning_rate",
type=float,
default=5e-5,
help="Initial learning rate (after the potential warmup period) to use.",
)
parser.add_argument("--weight_decay", type=float, default=0.0, help="Weight decay to use.")
parser.add_argument("--num_train_epochs", type=int, default=3, help="Total number of training epochs to perform.")
parser.add_argument(
"--max_train_steps",
type=int,
default=None,
help="Total number of training steps to perform. If provided, overrides num_train_epochs.",
)
parser.add_argument(
"--gradient_accumulation_steps",
type=int,
default=1,
help="Number of updates steps to accumulate before performing a backward/update pass.",
)
parser.add_argument(
"--lr_scheduler_type",
type=SchedulerType,
default="linear",
help="The scheduler type to use.",
choices=["linear", "cosine", "cosine_with_restarts", "polynomial", "constant", "constant_with_warmup"],
)
parser.add_argument(
"--num_warmup_steps", type=int, default=0, help="Number of steps for the warmup in the lr scheduler."
)
parser.add_argument("--output_dir", type=str, default=None, help="Where to store the final model.")
parser.add_argument("--seed", type=int, default=None, help="A seed for reproducible training.")
parser.add_argument(
"--doc_stride",
type=int,
default=128,
help="When splitting up a long document into chunks how much stride to take between chunks.",
)
parser.add_argument(
"--n_best_size",
type=int,
default=20,
help="The total number of n-best predictions to generate when looking for an answer.",
)
parser.add_argument(
"--null_score_diff_threshold",
type=float,
default=0.0,
help="The threshold used to select the null answer: if the best answer has a score that is less than "
"the score of the null answer minus this threshold, the null answer is selected for this example. "
"Only useful when `version_2_with_negative=True`.",
)
parser.add_argument(
"--version_2_with_negative",
type=bool,
default=False,
help="If true, some of the examples do not have an answer.",
)
parser.add_argument(
"--max_answer_length",
type=int,
default=30,
help="The maximum length of an answer that can be generated. This is needed because the start "
"and end predictions are not conditioned on one another.",
)
parser.add_argument(
"--max_train_samples",
type=int,
default=None,
help="For debugging purposes or quicker training, truncate the number of training examples to this "
"value if set.",
)
parser.add_argument(
"--max_eval_samples",
type=int,
default=None,
help="For debugging purposes or quicker training, truncate the number of evaluation examples to this "
"value if set.",
)
parser.add_argument(
"--overwrite_cache", type=bool, default=False, help="Overwrite the cached training and evaluation sets"
)
parser.add_argument(
"--max_predict_samples",
type=int,
default=None,
help="For debugging purposes or quicker training, truncate the number of prediction examples to this",
)
parser.add_argument("--push_to_hub", action="store_true", help="Whether or not to push the model to the Hub.")
parser.add_argument(
"--hub_model_id", type=str, help="The name of the repository to keep in sync with the local `output_dir`."
)
parser.add_argument("--hub_token", type=str, help="The token to use to push to the Model Hub.")
args = parser.parse_args()
# Sanity checks
if (
args.dataset_name is None
and args.train_file is None
and args.validation_file is None
and args.test_file is None
):
raise ValueError("Need either a dataset name or a training/validation/test file.")
else:
if args.train_file is not None:
extension = args.train_file.split(".")[-1]
assert extension in ["csv", "json"], "`train_file` should be a csv or a json file."
if args.validation_file is not None:
extension = args.validation_file.split(".")[-1]
assert extension in ["csv", "json"], "`validation_file` should be a csv or a json file."
if args.test_file is not None:
extension = args.test_file.split(".")[-1]
assert extension in ["csv", "json"], "`test_file` should be a csv or a json file."
if args.push_to_hub:
assert args.output_dir is not None, "Need an `output_dir` to create a repo when `--push_to_hub` is passed."
return args
def main():
args = parse_args()
# Initialize the accelerator. We will let the accelerator handle device placement for us in this example.
accelerator = Accelerator()
# Make one log on every process with the configuration for debugging.
logging.basicConfig(
format="%(asctime)s - %(levelname)s - %(name)s - %(message)s",
datefmt="%m/%d/%Y %H:%M:%S",
level=logging.INFO,
)
logger.info(accelerator.state)
# Setup logging, we only want one process per machine to log things on the screen.
# accelerator.is_local_main_process is only True for one process per machine.
logger.setLevel(logging.INFO if accelerator.is_local_main_process else logging.ERROR)
if accelerator.is_local_main_process:
datasets.utils.logging.set_verbosity_warning()
transformers.utils.logging.set_verbosity_info()
else:
datasets.utils.logging.set_verbosity_error()
transformers.utils.logging.set_verbosity_error()
# If passed along, set the training seed now.
if args.seed is not None:
set_seed(args.seed)
# Handle the repository creation
if accelerator.is_main_process:
if args.push_to_hub:
if args.hub_model_id is None:
repo_name = get_full_repo_name(Path(args.output_dir).name, token=args.hub_token)
else:
repo_name = args.hub_model_id
repo = Repository(args.output_dir, clone_from=repo_name)
elif args.output_dir is not None:
os.makedirs(args.output_dir, exist_ok=True)
accelerator.wait_for_everyone()
# Get the datasets: you can either provide your own CSV/JSON/TXT training and evaluation files (see below)
# or just provide the name of one of the public datasets available on the hub at https://huggingface.co/datasets/
# (the dataset will be downloaded automatically from the datasets Hub).
#
# For CSV/JSON files, this script will use the column called 'text' or the first column if no column called
# 'text' is found. You can easily tweak this behavior (see below).
#
# In distributed training, the load_dataset function guarantee that only one local process can concurrently
# download the dataset.
if args.dataset_name is not None:
# Downloading and loading a dataset from the hub.
raw_datasets = load_dataset(args.dataset_name, args.dataset_config_name)
else:
data_files = {}
if args.train_file is not None:
data_files["train"] = args.train_file
if args.validation_file is not None:
data_files["validation"] = args.validation_file
if args.test_file is not None:
data_files["test"] = args.test_file
extension = args.train_file.split(".")[-1]
raw_datasets = load_dataset(extension, data_files=data_files, field="data")
# See more about loading any type of standard or custom dataset (from files, python dict, pandas DataFrame, etc) at
# https://huggingface.co/docs/datasets/loading_datasets.html.
# Load pretrained model and tokenizer
#
# In distributed training, the .from_pretrained methods guarantee that only one local process can concurrently
# download model & vocab.
config = XLNetConfig.from_pretrained(args.model_name_or_path)
tokenizer = XLNetTokenizerFast.from_pretrained(args.model_name_or_path)
model = XLNetForQuestionAnswering.from_pretrained(
args.model_name_or_path, from_tf=bool(".ckpt" in args.model_name_or_path), config=config
)
# Preprocessing the datasets.
# Preprocessing is slighlty different for training and evaluation.
column_names = raw_datasets["train"].column_names
question_column_name = "question" if "question" in column_names else column_names[0]
context_column_name = "context" if "context" in column_names else column_names[1]
answer_column_name = "answers" if "answers" in column_names else column_names[2]
# Padding side determines if we do (question|context) or (context|question).
pad_on_right = tokenizer.padding_side == "right"
if args.max_seq_length > tokenizer.model_max_length:
logger.warning(
f"The max_seq_length passed ({args.max_seq_length}) is larger than the maximum length for the"
f"model ({tokenizer.model_max_length}). Using max_seq_length={tokenizer.model_max_length}."
)
max_seq_length = min(args.max_seq_length, tokenizer.model_max_length)
# Training preprocessing
def prepare_train_features(examples):
# Some of the questions have lots of whitespace on the left, which is not useful and will make the
# truncation of the context fail (the tokenized question will take a lots of space). So we remove that
# left whitespace
examples[question_column_name] = [q.lstrip() for q in examples[question_column_name]]
# Tokenize our examples with truncation and maybe padding, but keep the overflows using a stride. This results
# in one example possible giving several features when a context is long, each of those features having a
# context that overlaps a bit the context of the previous feature.
tokenized_examples = tokenizer(
examples[question_column_name if pad_on_right else context_column_name],
examples[context_column_name if pad_on_right else question_column_name],
truncation="only_second" if pad_on_right else "only_first",
max_length=max_seq_length,
stride=args.doc_stride,
return_overflowing_tokens=True,
return_offsets_mapping=True,
return_special_tokens_mask=True,
return_token_type_ids=True,
padding="max_length",
)
# Since one example might give us several features if it has a long context, we need a map from a feature to
# its corresponding example. This key gives us just that.
sample_mapping = tokenized_examples.pop("overflow_to_sample_mapping")
# The offset mappings will give us a map from token to character position in the original context. This will
# help us compute the start_positions and end_positions.
offset_mapping = tokenized_examples.pop("offset_mapping")
# The special tokens will help us build the p_mask (which indicates the tokens that can't be in answers).
special_tokens = tokenized_examples.pop("special_tokens_mask")
# Let's label those examples!
tokenized_examples["start_positions"] = []
tokenized_examples["end_positions"] = []
tokenized_examples["is_impossible"] = []
tokenized_examples["cls_index"] = []
tokenized_examples["p_mask"] = []
for i, offsets in enumerate(offset_mapping):
# We will label impossible answers with the index of the CLS token.
input_ids = tokenized_examples["input_ids"][i]
cls_index = input_ids.index(tokenizer.cls_token_id)
tokenized_examples["cls_index"].append(cls_index)
# Grab the sequence corresponding to that example (to know what is the context and what is the question).
sequence_ids = tokenized_examples["token_type_ids"][i]
for k, s in enumerate(special_tokens[i]):
if s:
sequence_ids[k] = 3
context_idx = 1 if pad_on_right else 0
# Build the p_mask: non special tokens and context gets 0.0, the others get 1.0.
# The cls token gets 1.0 too (for predictions of empty answers).
tokenized_examples["p_mask"].append(
[
0.0 if (not special_tokens[i][k] and s == context_idx) or k == cls_index else 1.0
for k, s in enumerate(sequence_ids)
]
)
# One example can give several spans, this is the index of the example containing this span of text.
sample_index = sample_mapping[i]
answers = examples[answer_column_name][sample_index]
# If no answers are given, set the cls_index as answer.
if len(answers["answer_start"]) == 0:
tokenized_examples["start_positions"].append(cls_index)
tokenized_examples["end_positions"].append(cls_index)
tokenized_examples["is_impossible"].append(1.0)
else:
# Start/end character index of the answer in the text.
start_char = answers["answer_start"][0]
end_char = start_char + len(answers["text"][0])
# Start token index of the current span in the text.
token_start_index = 0
while sequence_ids[token_start_index] != context_idx:
token_start_index += 1
# End token index of the current span in the text.
token_end_index = len(input_ids) - 1
while sequence_ids[token_end_index] != context_idx:
token_end_index -= 1
# Detect if the answer is out of the span (in which case this feature is labeled with the CLS index).
if not (offsets[token_start_index][0] <= start_char and offsets[token_end_index][1] >= end_char):
tokenized_examples["start_positions"].append(cls_index)
tokenized_examples["end_positions"].append(cls_index)
tokenized_examples["is_impossible"].append(1.0)
else:
# Otherwise move the token_start_index and token_end_index to the two ends of the answer.
# Note: we could go after the last offset if the answer is the last word (edge case).
while token_start_index < len(offsets) and offsets[token_start_index][0] <= start_char:
token_start_index += 1
tokenized_examples["start_positions"].append(token_start_index - 1)
while offsets[token_end_index][1] >= end_char:
token_end_index -= 1
tokenized_examples["end_positions"].append(token_end_index + 1)
tokenized_examples["is_impossible"].append(0.0)
return tokenized_examples
if "train" not in raw_datasets:
raise ValueError("--do_train requires a train dataset")
train_dataset = raw_datasets["train"]
if args.max_train_samples is not None:
# We will select sample from whole data if agument is specified
train_dataset = train_dataset.select(range(args.max_train_samples))
# Create train feature from dataset
with accelerator.main_process_first():
train_dataset = train_dataset.map(
prepare_train_features,
batched=True,
num_proc=args.preprocessing_num_workers,
remove_columns=column_names,
load_from_cache_file=not args.overwrite_cache,
desc="Running tokenizer on train dataset",
)
if args.max_train_samples is not None:
# Number of samples might increase during Feature Creation, We select only specified max samples
train_dataset = train_dataset.select(range(args.max_train_samples))
# Validation preprocessing
def prepare_validation_features(examples):
# Some of the questions have lots of whitespace on the left, which is not useful and will make the
# truncation of the context fail (the tokenized question will take a lots of space). So we remove that
# left whitespace
examples[question_column_name] = [q.lstrip() for q in examples[question_column_name]]
# Tokenize our examples with truncation and maybe padding, but keep the overflows using a stride. This results
# in one example possible giving several features when a context is long, each of those features having a
# context that overlaps a bit the context of the previous feature.
tokenized_examples = tokenizer(
examples[question_column_name if pad_on_right else context_column_name],
examples[context_column_name if pad_on_right else question_column_name],
truncation="only_second" if pad_on_right else "only_first",
max_length=max_seq_length,
stride=args.doc_stride,
return_overflowing_tokens=True,
return_offsets_mapping=True,
return_special_tokens_mask=True,
return_token_type_ids=True,
padding="max_length",
)
# Since one example might give us several features if it has a long context, we need a map from a feature to
# its corresponding example. This key gives us just that.
sample_mapping = tokenized_examples.pop("overflow_to_sample_mapping")
# The special tokens will help us build the p_mask (which indicates the tokens that can't be in answers).
special_tokens = tokenized_examples.pop("special_tokens_mask")
# For evaluation, we will need to convert our predictions to substrings of the context, so we keep the
# corresponding example_id and we will store the offset mappings.
tokenized_examples["example_id"] = []
# We still provide the index of the CLS token and the p_mask to the model, but not the is_impossible label.
tokenized_examples["cls_index"] = []
tokenized_examples["p_mask"] = []
for i, input_ids in enumerate(tokenized_examples["input_ids"]):
# Find the CLS token in the input ids.
cls_index = input_ids.index(tokenizer.cls_token_id)
tokenized_examples["cls_index"].append(cls_index)
# Grab the sequence corresponding to that example (to know what is the context and what is the question).
sequence_ids = tokenized_examples["token_type_ids"][i]
for k, s in enumerate(special_tokens[i]):
if s:
sequence_ids[k] = 3
context_idx = 1 if pad_on_right else 0
# Build the p_mask: non special tokens and context gets 0.0, the others 1.0.
tokenized_examples["p_mask"].append(
[
0.0 if (not special_tokens[i][k] and s == context_idx) or k == cls_index else 1.0
for k, s in enumerate(sequence_ids)
]
)
# One example can give several spans, this is the index of the example containing this span of text.
sample_index = sample_mapping[i]
tokenized_examples["example_id"].append(examples["id"][sample_index])
# Set to None the offset_mapping that are not part of the context so it's easy to determine if a token
# position is part of the context or not.
tokenized_examples["offset_mapping"][i] = [
(o if sequence_ids[k] == context_idx else None)
for k, o in enumerate(tokenized_examples["offset_mapping"][i])
]
return tokenized_examples
if "validation" not in raw_datasets:
raise ValueError("--do_eval requires a validation dataset")
eval_examples = raw_datasets["validation"]
if args.max_eval_samples is not None:
# We will select sample from whole data
eval_examples = eval_examples.select(range(args.max_eval_samples))
# Validation Feature Creation
with accelerator.main_process_first():
eval_dataset = eval_examples.map(
prepare_validation_features,
batched=True,
num_proc=args.preprocessing_num_workers,
remove_columns=column_names,
load_from_cache_file=not args.overwrite_cache,
desc="Running tokenizer on validation dataset",
)
if args.max_eval_samples is not None:
# During Feature creation dataset samples might increase, we will select required samples again
eval_dataset = eval_dataset.select(range(args.max_eval_samples))
if args.do_predict:
if "test" not in raw_datasets:
raise ValueError("--do_predict requires a test dataset")
predict_examples = raw_datasets["test"]
if args.max_predict_samples is not None:
# We will select sample from whole data
predict_examples = predict_examples.select(range(args.max_predict_samples))
# Predict Feature Creation
with accelerator.main_process_first():
predict_dataset = predict_examples.map(
prepare_validation_features,
batched=True,
num_proc=args.preprocessing_num_workers,
remove_columns=column_names,
load_from_cache_file=not args.overwrite_cache,
desc="Running tokenizer on prediction dataset",
)
if args.max_predict_samples is not None:
# During Feature creation dataset samples might increase, we will select required samples again
predict_dataset = predict_dataset.select(range(args.max_predict_samples))
# Log a few random samples from the training set:
for index in random.sample(range(len(train_dataset)), 3):
logger.info(f"Sample {index} of the training set: {train_dataset[index]}.")
# DataLoaders creation:
if args.pad_to_max_length:
# If padding was already done ot max length, we use the default data collator that will just convert everything
# to tensors.
data_collator = default_data_collator
else:
# Otherwise, `DataCollatorWithPadding` will apply dynamic padding for us (by padding to the maximum length of
# the samples passed). When using mixed precision, we add `pad_to_multiple_of=8` to pad all tensors to multiple
# of 8s, which will enable the use of Tensor Cores on NVIDIA hardware with compute capability >= 7.5 (Volta).
data_collator = DataCollatorWithPadding(tokenizer, pad_to_multiple_of=(8 if accelerator.use_fp16 else None))
train_dataloader = DataLoader(
train_dataset, shuffle=True, collate_fn=data_collator, batch_size=args.per_device_train_batch_size
)
eval_dataset_for_model = eval_dataset.remove_columns(["example_id", "offset_mapping"])
eval_dataloader = DataLoader(
eval_dataset_for_model, collate_fn=data_collator, batch_size=args.per_device_eval_batch_size
)
if args.do_predict:
predict_dataset_for_model = predict_dataset.remove_columns(["example_id", "offset_mapping"])
predict_dataloader = DataLoader(
predict_dataset_for_model, collate_fn=data_collator, batch_size=args.per_device_eval_batch_size
)
# Post-processing:
def post_processing_function(examples, features, predictions, stage="eval"):
# Post-processing: we match the start logits and end logits to answers in the original context.
predictions, scores_diff_json = postprocess_qa_predictions_with_beam_search(
examples=examples,
features=features,
predictions=predictions,
version_2_with_negative=args.version_2_with_negative,
n_best_size=args.n_best_size,
max_answer_length=args.max_answer_length,
start_n_top=model.config.start_n_top,
end_n_top=model.config.end_n_top,
output_dir=args.output_dir,
prefix=stage,
)
# Format the result to the format the metric expects.
if args.version_2_with_negative:
formatted_predictions = [
{"id": k, "prediction_text": v, "no_answer_probability": scores_diff_json[k]}
for k, v in predictions.items()
]
else:
formatted_predictions = [{"id": k, "prediction_text": v} for k, v in predictions.items()]
references = [{"id": ex["id"], "answers": ex[answer_column_name]} for ex in examples]
return EvalPrediction(predictions=formatted_predictions, label_ids=references)
metric = load_metric("squad_v2" if args.version_2_with_negative else "squad")
def create_and_fill_np_array(start_or_end_logits, dataset, max_len):
"""
Create and fill numpy array of size len_of_validation_data * max_length_of_output_tensor
Args:
start_or_end_logits(:obj:`tensor`):
This is the output predictions of the model. We can only enter either start or end logits.
eval_dataset: Evaluation dataset
max_len(:obj:`int`):
The maximum length of the output tensor. ( See the model.eval() part for more details )
"""
step = 0
# create a numpy array and fill it with -100.
logits_concat = np.full((len(dataset), max_len), -100, dtype=np.float32)
# Now since we have create an array now we will populate it with the outputs gathered using accelerator.gather
for i, output_logit in enumerate(start_or_end_logits): # populate columns
# We have to fill it such that we have to take the whole tensor and replace it on the newly created array
# And after every iteration we have to change the step
batch_size = output_logit.shape[0]
cols = output_logit.shape[1]
if step + batch_size < len(dataset):
logits_concat[step : step + batch_size, :cols] = output_logit
else:
logits_concat[step:, :cols] = output_logit[: len(dataset) - step]
step += batch_size
return logits_concat
# Optimizer
# Split weights in two groups, one with weight decay and the other not.
no_decay = ["bias", "LayerNorm.weight"]
optimizer_grouped_parameters = [
{
"params": [p for n, p in model.named_parameters() if not any(nd in n for nd in no_decay)],
"weight_decay": args.weight_decay,
},
{
"params": [p for n, p in model.named_parameters() if any(nd in n for nd in no_decay)],
"weight_decay": 0.0,
},
]
optimizer = AdamW(optimizer_grouped_parameters, lr=args.learning_rate)
# Prepare everything with our `accelerator`.
model, optimizer, train_dataloader, eval_dataloader = accelerator.prepare(
model, optimizer, train_dataloader, eval_dataloader
)
# Note -> the training dataloader needs to be prepared before we grab his length below (cause its length will be
# shorter in multiprocess)
# Scheduler and math around the number of training steps.
num_update_steps_per_epoch = math.ceil(len(train_dataloader) / args.gradient_accumulation_steps)
if args.max_train_steps is None:
args.max_train_steps = args.num_train_epochs * num_update_steps_per_epoch
else:
args.num_train_epochs = math.ceil(args.max_train_steps / num_update_steps_per_epoch)
lr_scheduler = get_scheduler(
name=args.lr_scheduler_type,
optimizer=optimizer,
num_warmup_steps=args.num_warmup_steps,
num_training_steps=args.max_train_steps,
)
# Train!
total_batch_size = args.per_device_train_batch_size * accelerator.num_processes * args.gradient_accumulation_steps
logger.info("***** Running training *****")
logger.info(f" Num examples = {len(train_dataset)}")
logger.info(f" Num Epochs = {args.num_train_epochs}")
logger.info(f" Instantaneous batch size per device = {args.per_device_train_batch_size}")
logger.info(f" Total train batch size (w. parallel, distributed & accumulation) = {total_batch_size}")
logger.info(f" Gradient Accumulation steps = {args.gradient_accumulation_steps}")
logger.info(f" Total optimization steps = {args.max_train_steps}")
# Only show the progress bar once on each machine.
progress_bar = tqdm(range(args.max_train_steps), disable=not accelerator.is_local_main_process)
completed_steps = 0
for epoch in range(args.num_train_epochs):
model.train()
for step, batch in enumerate(train_dataloader):
outputs = model(**batch)
loss = outputs.loss
loss = loss / args.gradient_accumulation_steps
accelerator.backward(loss)
if step % args.gradient_accumulation_steps == 0 or step == len(train_dataloader) - 1:
optimizer.step()
lr_scheduler.step()
optimizer.zero_grad()
progress_bar.update(1)
completed_steps += 1
if completed_steps >= args.max_train_steps:
break
if args.push_to_hub and epoch < args.num_train_epochs - 1:
accelerator.wait_for_everyone()
unwrapped_model = accelerator.unwrap_model(model)
unwrapped_model.save_pretrained(args.output_dir, save_function=accelerator.save)
if accelerator.is_main_process:
tokenizer.save_pretrained(args.output_dir)
repo.push_to_hub(
commit_message=f"Training in progress epoch {epoch}", blocking=False, auto_lfs_prune=True
)
# intialize all lists to collect the batches
all_start_top_log_probs = []
all_start_top_index = []
all_end_top_log_probs = []
all_end_top_index = []
all_cls_logits = []
for step, batch in enumerate(eval_dataloader):
with torch.no_grad():
outputs = model(**batch)
start_top_log_probs = outputs.start_top_log_probs
start_top_index = outputs.start_top_index
end_top_log_probs = outputs.end_top_log_probs
end_top_index = outputs.end_top_index
cls_logits = outputs.cls_logits
if not args.pad_to_max_length: # necessary to pad predictions and labels for being gathered
start_top_log_probs = accelerator.pad_across_processes(start_top_log_probs, dim=1, pad_index=-100)
start_top_index = accelerator.pad_across_processes(start_top_index, dim=1, pad_index=-100)
end_top_log_probs = accelerator.pad_across_processes(end_top_log_probs, dim=1, pad_index=-100)
end_top_index = accelerator.pad_across_processes(end_top_index, dim=1, pad_index=-100)
cls_logits = accelerator.pad_across_processes(cls_logits, dim=1, pad_index=-100)
all_start_top_log_probs.append(accelerator.gather(start_top_log_probs).cpu().numpy())
all_start_top_index.append(accelerator.gather(start_top_index).cpu().numpy())
all_end_top_log_probs.append(accelerator.gather(end_top_log_probs).cpu().numpy())
all_end_top_index.append(accelerator.gather(end_top_index).cpu().numpy())
all_cls_logits.append(accelerator.gather(cls_logits).cpu().numpy())
max_len = max([x.shape[1] for x in all_end_top_log_probs]) # Get the max_length of the tensor
# concatenate all numpy arrays collected above
start_top_log_probs_concat = create_and_fill_np_array(all_start_top_log_probs, eval_dataset, max_len)
start_top_index_concat = create_and_fill_np_array(all_start_top_index, eval_dataset, max_len)
end_top_log_probs_concat = create_and_fill_np_array(all_end_top_log_probs, eval_dataset, max_len)
end_top_index_concat = create_and_fill_np_array(all_end_top_index, eval_dataset, max_len)
cls_logits_concat = np.concatenate(all_cls_logits, axis=0)
# delete the list of numpy arrays
del start_top_log_probs
del start_top_index
del end_top_log_probs
del end_top_index
del cls_logits
outputs_numpy = (
start_top_log_probs_concat,
start_top_index_concat,
end_top_log_probs_concat,
end_top_index_concat,
cls_logits_concat,
)
prediction = post_processing_function(eval_examples, eval_dataset, outputs_numpy)
eval_metric = metric.compute(predictions=prediction.predictions, references=prediction.label_ids)
logger.info(f"Evaluation metrics: {eval_metric}")
if args.do_predict:
# intialize all lists to collect the batches
all_start_top_log_probs = []
all_start_top_index = []
all_end_top_log_probs = []
all_end_top_index = []
all_cls_logits = []
for step, batch in enumerate(predict_dataloader):
with torch.no_grad():
outputs = model(**batch)
start_top_log_probs = outputs.start_top_log_probs
start_top_index = outputs.start_top_index
end_top_log_probs = outputs.end_top_log_probs
end_top_index = outputs.end_top_index
cls_logits = outputs.cls_logits
if not args.pad_to_max_length: # necessary to pad predictions and labels for being gathered
start_top_log_probs = accelerator.pad_across_processes(start_top_log_probs, dim=1, pad_index=-100)
start_top_index = accelerator.pad_across_processes(start_top_index, dim=1, pad_index=-100)
end_top_log_probs = accelerator.pad_across_processes(end_top_log_probs, dim=1, pad_index=-100)
end_top_index = accelerator.pad_across_processes(end_top_index, dim=1, pad_index=-100)
cls_logits = accelerator.pad_across_processes(cls_logits, dim=1, pad_index=-100)
all_start_top_log_probs.append(accelerator.gather(start_top_log_probs).cpu().numpy())
all_start_top_index.append(accelerator.gather(start_top_index).cpu().numpy())
all_end_top_log_probs.append(accelerator.gather(end_top_log_probs).cpu().numpy())
all_end_top_index.append(accelerator.gather(end_top_index).cpu().numpy())
all_cls_logits.append(accelerator.gather(cls_logits).cpu().numpy())
max_len = max([x.shape[1] for x in all_end_top_log_probs]) # Get the max_length of the tensor
# concatenate all numpy arrays collected above
start_top_log_probs_concat = create_and_fill_np_array(all_start_top_log_probs, predict_dataset, max_len)
start_top_index_concat = create_and_fill_np_array(all_start_top_index, predict_dataset, max_len)
end_top_log_probs_concat = create_and_fill_np_array(all_end_top_log_probs, predict_dataset, max_len)
end_top_index_concat = create_and_fill_np_array(all_end_top_index, predict_dataset, max_len)
cls_logits_concat = np.concatenate(all_cls_logits, axis=0)
# delete the list of numpy arrays
del start_top_log_probs
del start_top_index
del end_top_log_probs
del end_top_index
del cls_logits
outputs_numpy = (
start_top_log_probs_concat,
start_top_index_concat,
end_top_log_probs_concat,
end_top_index_concat,
cls_logits_concat,
)
prediction = post_processing_function(predict_examples, predict_dataset, outputs_numpy)
predict_metric = metric.compute(predictions=prediction.predictions, references=prediction.label_ids)
logger.info(f"Predict metrics: {predict_metric}")
if args.output_dir is not None:
accelerator.wait_for_everyone()
unwrapped_model = accelerator.unwrap_model(model)
unwrapped_model.save_pretrained(args.output_dir, save_function=accelerator.save)
if accelerator.is_main_process:
tokenizer.save_pretrained(args.output_dir)
if args.push_to_hub:
repo.push_to_hub(commit_message="End of training", auto_lfs_prune=True)
if __name__ == "__main__":
main()
| 40,589 | 46.033604 | 120 | py |
robust-transformers | robust-transformers-main/examples/pytorch/question-answering/utils_qa.py | # coding=utf-8
# Copyright 2020 The HuggingFace Team All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
"""
Post-processing utilities for question answering.
"""
import collections
import json
import logging
import os
from typing import Optional, Tuple
import numpy as np
from tqdm.auto import tqdm
import pdb
logger = logging.getLogger(__name__)
def postprocess_qa_predictions(
examples,
features,
predictions: Tuple[np.ndarray, np.ndarray],
version_2_with_negative: bool = False,
n_best_size: int = 20,
max_answer_length: int = 30,
null_score_diff_threshold: float = 0.0,
output_dir: Optional[str] = None,
prefix: Optional[str] = None,
log_level: Optional[int] = logging.WARNING,
):
"""
Post-processes the predictions of a question-answering model to convert them to answers that are substrings of the
original contexts. This is the base postprocessing functions for models that only return start and end logits.
Args:
examples: The non-preprocessed dataset (see the main script for more information).
features: The processed dataset (see the main script for more information).
predictions (:obj:`Tuple[np.ndarray, np.ndarray]`):
The predictions of the model: two arrays containing the start logits and the end logits respectively. Its
first dimension must match the number of elements of :obj:`features`.
version_2_with_negative (:obj:`bool`, `optional`, defaults to :obj:`False`):
Whether or not the underlying dataset contains examples with no answers.
n_best_size (:obj:`int`, `optional`, defaults to 20):
The total number of n-best predictions to generate when looking for an answer.
max_answer_length (:obj:`int`, `optional`, defaults to 30):
The maximum length of an answer that can be generated. This is needed because the start and end predictions
are not conditioned on one another.
null_score_diff_threshold (:obj:`float`, `optional`, defaults to 0):
The threshold used to select the null answer: if the best answer has a score that is less than the score of
the null answer minus this threshold, the null answer is selected for this example (note that the score of
the null answer for an example giving several features is the minimum of the scores for the null answer on
each feature: all features must be aligned on the fact they `want` to predict a null answer).
Only useful when :obj:`version_2_with_negative` is :obj:`True`.
output_dir (:obj:`str`, `optional`):
If provided, the dictionaries of predictions, n_best predictions (with their scores and logits) and, if
:obj:`version_2_with_negative=True`, the dictionary of the scores differences between best and null
answers, are saved in `output_dir`.
prefix (:obj:`str`, `optional`):
If provided, the dictionaries mentioned above are saved with `prefix` added to their names.
log_level (:obj:`int`, `optional`, defaults to ``logging.WARNING``):
``logging`` log level (e.g., ``logging.WARNING``)
"""
if len(predictions) != 2:
raise ValueError("`predictions` should be a tuple with two elements (start_logits, end_logits).")
all_start_logits, all_end_logits = predictions
if len(predictions[0]) != len(features):
raise ValueError(f"Got {len(predictions[0])} predictions and {len(features)} features.")
# Build a map example to its corresponding features.
example_id_to_index = {k: i for i, k in enumerate(examples["id"])}
features_per_example = collections.defaultdict(list)
for i, feature in enumerate(features):
features_per_example[example_id_to_index[feature["example_id"]]].append(i)
# The dictionaries we have to fill.
all_predictions = collections.OrderedDict()
all_nbest_json = collections.OrderedDict()
if version_2_with_negative:
scores_diff_json = collections.OrderedDict()
# Logging.
logger.setLevel(log_level)
logger.info(f"Post-processing {len(examples)} example predictions split into {len(features)} features.")
# Let's loop over all the examples!
for example_index, example in enumerate(tqdm(examples)):
# Those are the indices of the features associated to the current example.
feature_indices = features_per_example[example_index]
min_null_prediction = None
prelim_predictions = []
# Looping through all the features associated to the current example.
for feature_index in feature_indices:
# We grab the predictions of the model for this feature.
start_logits = all_start_logits[feature_index]
end_logits = all_end_logits[feature_index]
# This is what will allow us to map some the positions in our logits to span of texts in the original
# context.
offset_mapping = features[feature_index]["offset_mapping"]
# Optional `token_is_max_context`, if provided we will remove answers that do not have the maximum context
# available in the current feature.
token_is_max_context = features[feature_index].get("token_is_max_context", None)
# Update minimum null prediction.
feature_null_score = start_logits[0] + end_logits[0]
if min_null_prediction is None or min_null_prediction["score"] > feature_null_score:
min_null_prediction = {
"offsets": (0, 0),
"score": feature_null_score,
"start_logit": start_logits[0],
"end_logit": end_logits[0],
}
# Go through all possibilities for the `n_best_size` greater start and end logits.
start_indexes = np.argsort(start_logits)[-1 : -n_best_size - 1 : -1].tolist()
end_indexes = np.argsort(end_logits)[-1 : -n_best_size - 1 : -1].tolist()
for start_index in start_indexes:
for end_index in end_indexes:
# Don't consider out-of-scope answers, either because the indices are out of bounds or correspond
# to part of the input_ids that are not in the context.
if (
start_index >= len(offset_mapping)
or end_index >= len(offset_mapping)
or offset_mapping[start_index] is None
or len(offset_mapping[start_index]) < 2
or offset_mapping[end_index] is None
or len(offset_mapping[end_index]) < 2
):
continue
# Don't consider answers with a length that is either < 0 or > max_answer_length.
if end_index < start_index or end_index - start_index + 1 > max_answer_length:
continue
# Don't consider answer that don't have the maximum context available (if such information is
# provided).
if token_is_max_context is not None and not token_is_max_context.get(str(start_index), False):
continue
prelim_predictions.append(
{
"offsets": (offset_mapping[start_index][0], offset_mapping[end_index][1]),
"score": start_logits[start_index] + end_logits[end_index],
"start_logit": start_logits[start_index],
"end_logit": end_logits[end_index],
}
)
if version_2_with_negative:
# Add the minimum null prediction
prelim_predictions.append(min_null_prediction)
null_score = min_null_prediction["score"]
# Only keep the best `n_best_size` predictions.
predictions = sorted(prelim_predictions, key=lambda x: x["score"], reverse=True)[:n_best_size]
# Add back the minimum null prediction if it was removed because of its low score.
if version_2_with_negative and not any(p["offsets"] == (0, 0) for p in predictions):
predictions.append(min_null_prediction)
# Use the offsets to gather the answer text in the original context.
context = example["context"]
for pred in predictions:
offsets = pred.pop("offsets")
pred["text"] = context[offsets[0] : offsets[1]]
# In the very rare edge case we have not a single non-null prediction, we create a fake prediction to avoid
# failure.
if len(predictions) == 0 or (len(predictions) == 1 and predictions[0]["text"] == ""):
predictions.insert(0, {"text": "empty", "start_logit": 0.0, "end_logit": 0.0, "score": 0.0})
# Compute the softmax of all scores (we do it with numpy to stay independent from torch/tf in this file, using
# the LogSumExp trick).
scores = np.array([pred.pop("score") for pred in predictions])
exp_scores = np.exp(scores - np.max(scores))
probs = exp_scores / exp_scores.sum()
# Include the probabilities in our predictions.
for prob, pred in zip(probs, predictions):
pred["probability"] = prob
# Pick the best prediction. If the null answer is not possible, this is easy.
if not version_2_with_negative:
all_predictions[example["id"]] = predictions[0]["text"]
else:
# Otherwise we first need to find the best non-empty prediction.
i = 0
while predictions[i]["text"] == "":
i += 1
best_non_null_pred = predictions[i]
# Then we compare to the null prediction using the threshold.
score_diff = null_score - best_non_null_pred["start_logit"] - best_non_null_pred["end_logit"]
scores_diff_json[example["id"]] = float(score_diff) # To be JSON-serializable.
if score_diff > null_score_diff_threshold:
all_predictions[example["id"]] = ""
else:
all_predictions[example["id"]] = best_non_null_pred["text"]
# Make `predictions` JSON-serializable by casting np.float back to float.
all_nbest_json[example["id"]] = [
{k: (float(v) if isinstance(v, (np.float16, np.float32, np.float64)) else v) for k, v in pred.items()}
for pred in predictions
]
# If we have an output_dir, let's save all those dicts.
if output_dir is not None:
if not os.path.isdir(output_dir):
raise EnvironmentError(f"{output_dir} is not a directory.")
prediction_file = os.path.join(
output_dir, "predictions.json" if prefix is None else f"{prefix}_predictions.json"
)
nbest_file = os.path.join(
output_dir, "nbest_predictions.json" if prefix is None else f"{prefix}_nbest_predictions.json"
)
if version_2_with_negative:
null_odds_file = os.path.join(
output_dir, "null_odds.json" if prefix is None else f"{prefix}_null_odds.json"
)
logger.info(f"Saving predictions to {prediction_file}.")
with open(prediction_file, "w") as writer:
writer.write(json.dumps(all_predictions, indent=4) + "\n")
logger.info(f"Saving nbest_preds to {nbest_file}.")
with open(nbest_file, "w") as writer:
writer.write(json.dumps(all_nbest_json, indent=4) + "\n")
if version_2_with_negative:
logger.info(f"Saving null_odds to {null_odds_file}.")
with open(null_odds_file, "w") as writer:
writer.write(json.dumps(scores_diff_json, indent=4) + "\n")
return all_predictions
def postprocess_qa_predictions_with_beam_search(
examples,
features,
predictions: Tuple[np.ndarray, np.ndarray],
version_2_with_negative: bool = False,
n_best_size: int = 20,
max_answer_length: int = 30,
start_n_top: int = 5,
end_n_top: int = 5,
output_dir: Optional[str] = None,
prefix: Optional[str] = None,
log_level: Optional[int] = logging.WARNING,
):
"""
Post-processes the predictions of a question-answering model with beam search to convert them to answers that are substrings of the
original contexts. This is the postprocessing functions for models that return start and end logits, indices, as well as
cls token predictions.
Args:
examples: The non-preprocessed dataset (see the main script for more information).
features: The processed dataset (see the main script for more information).
predictions (:obj:`Tuple[np.ndarray, np.ndarray]`):
The predictions of the model: two arrays containing the start logits and the end logits respectively. Its
first dimension must match the number of elements of :obj:`features`.
version_2_with_negative (:obj:`bool`, `optional`, defaults to :obj:`False`):
Whether or not the underlying dataset contains examples with no answers.
n_best_size (:obj:`int`, `optional`, defaults to 20):
The total number of n-best predictions to generate when looking for an answer.
max_answer_length (:obj:`int`, `optional`, defaults to 30):
The maximum length of an answer that can be generated. This is needed because the start and end predictions
are not conditioned on one another.
start_n_top (:obj:`int`, `optional`, defaults to 5):
The number of top start logits too keep when searching for the :obj:`n_best_size` predictions.
end_n_top (:obj:`int`, `optional`, defaults to 5):
The number of top end logits too keep when searching for the :obj:`n_best_size` predictions.
output_dir (:obj:`str`, `optional`):
If provided, the dictionaries of predictions, n_best predictions (with their scores and logits) and, if
:obj:`version_2_with_negative=True`, the dictionary of the scores differences between best and null
answers, are saved in `output_dir`.
prefix (:obj:`str`, `optional`):
If provided, the dictionaries mentioned above are saved with `prefix` added to their names.
log_level (:obj:`int`, `optional`, defaults to ``logging.WARNING``):
``logging`` log level (e.g., ``logging.WARNING``)
"""
if len(predictions) != 5:
raise ValueError("`predictions` should be a tuple with five elements.")
start_top_log_probs, start_top_index, end_top_log_probs, end_top_index, cls_logits = predictions
if len(predictions[0]) != len(features):
raise ValueError(f"Got {len(predictions[0])} predictions and {len(features)} features.")
# Build a map example to its corresponding features.
example_id_to_index = {k: i for i, k in enumerate(examples["id"])}
features_per_example = collections.defaultdict(list)
for i, feature in enumerate(features):
features_per_example[example_id_to_index[feature["example_id"]]].append(i)
# The dictionaries we have to fill.
all_predictions = collections.OrderedDict()
all_nbest_json = collections.OrderedDict()
scores_diff_json = collections.OrderedDict() if version_2_with_negative else None
# Logging.
logger.setLevel(log_level)
logger.info(f"Post-processing {len(examples)} example predictions split into {len(features)} features.")
# Let's loop over all the examples!
for example_index, example in enumerate(tqdm(examples)):
# Those are the indices of the features associated to the current example.
feature_indices = features_per_example[example_index]
min_null_score = None
prelim_predictions = []
# Looping through all the features associated to the current example.
for feature_index in feature_indices:
# We grab the predictions of the model for this feature.
start_log_prob = start_top_log_probs[feature_index]
start_indexes = start_top_index[feature_index]
end_log_prob = end_top_log_probs[feature_index]
end_indexes = end_top_index[feature_index]
feature_null_score = cls_logits[feature_index]
# This is what will allow us to map some the positions in our logits to span of texts in the original
# context.
offset_mapping = features[feature_index]["offset_mapping"]
offset_mapping = [(o if (o and len(o)) else None) for o in offset_mapping] #TODO: Why is this code needed?
# Optional `token_is_max_context`, if provided we will remove answers that do not have the maximum context
# available in the current feature.
token_is_max_context = features[feature_index].get("token_is_max_context", None)
# Update minimum null prediction
if min_null_score is None or feature_null_score < min_null_score:
min_null_score = feature_null_score
# Go through all possibilities for the `n_start_top`/`n_end_top` greater start and end logits.
for i in range(start_n_top):
for j in range(end_n_top):
start_index = int(start_indexes[i])
j_index = i * end_n_top + j
end_index = int(end_indexes[j_index])
# Don't consider out-of-scope answers (last part of the test should be unnecessary because of the
# p_mask but let's not take any risk)
if (
start_index >= len(offset_mapping)
or end_index >= len(offset_mapping)
or offset_mapping[start_index] is None
or offset_mapping[end_index] is None
):
continue
# Don't consider answers with a length negative or > max_answer_length.
if end_index < start_index or end_index - start_index + 1 > max_answer_length:
continue
# Don't consider answer that don't have the maximum context available (if such information is
# provided).
if token_is_max_context is not None and not token_is_max_context.get(str(start_index), False):
continue
prelim_predictions.append(
{
"offsets": (offset_mapping[start_index][0], offset_mapping[end_index][1]),
"score": start_log_prob[i] + end_log_prob[j_index],
"start_log_prob": start_log_prob[i],
"end_log_prob": end_log_prob[j_index],
}
)
# Only keep the best `n_best_size` predictions.
predictions = sorted(prelim_predictions, key=lambda x: x["score"], reverse=True)[:n_best_size]
# Use the offsets to gather the answer text in the original context.
context = example["context"]
for pred in predictions:
offsets = pred.pop("offsets")
pred["text"] = context[offsets[0] : offsets[1]]
# In the very rare edge case we have not a single non-null prediction, we create a fake prediction to avoid
# failure.
if len(predictions) == 0:
predictions.insert(0, {"text": "", "start_logit": -1e-6, "end_logit": -1e-6, "score": -2e-6})
# Compute the softmax of all scores (we do it with numpy to stay independent from torch/tf in this file, using
# the LogSumExp trick).
scores = np.array([pred.pop("score") for pred in predictions])
exp_scores = np.exp(scores - np.max(scores))
probs = exp_scores / exp_scores.sum()
# Include the probabilities in our predictions.
for prob, pred in zip(probs, predictions):
pred["probability"] = prob
# Pick the best prediction and set the probability for the null answer.
if min_null_score is None:
import pdb; pdb.set_trace()
all_predictions[example["id"]] = predictions[0]["text"]
if version_2_with_negative:
scores_diff_json[example["id"]] = float(min_null_score)
# Make `predictions` JSON-serializable by casting np.float back to float.
all_nbest_json[example["id"]] = [
{k: (float(v) if isinstance(v, (np.float16, np.float32, np.float64)) else v) for k, v in pred.items()}
for pred in predictions
]
# If we have an output_dir, let's save all those dicts.
if output_dir is not None:
if not os.path.isdir(output_dir):
raise EnvironmentError(f"{output_dir} is not a directory.")
prediction_file = os.path.join(
output_dir, "predictions.json" if prefix is None else f"{prefix}_predictions.json"
)
nbest_file = os.path.join(
output_dir, "nbest_predictions.json" if prefix is None else f"{prefix}_nbest_predictions.json"
)
if version_2_with_negative:
null_odds_file = os.path.join(
output_dir, "null_odds.json" if prefix is None else f"{prefix}_null_odds.json"
)
logger.info(f"Saving predictions to {prediction_file}.")
with open(prediction_file, "w") as writer:
writer.write(json.dumps(all_predictions, indent=4) + "\n")
logger.info(f"Saving nbest_preds to {nbest_file}.")
with open(nbest_file, "w") as writer:
writer.write(json.dumps(all_nbest_json, indent=4) + "\n")
if version_2_with_negative:
logger.info(f"Saving null_odds to {null_odds_file}.")
with open(null_odds_file, "w") as writer:
writer.write(json.dumps(scores_diff_json, indent=4) + "\n")
return all_predictions, scores_diff_json
| 22,582 | 50.559361 | 135 | py |
robust-transformers | robust-transformers-main/examples/pytorch/question-answering/trainer_qa.py | # coding=utf-8
# Copyright 2020 The HuggingFace Team All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
"""
A subclass of `Trainer` specific to Question-Answering tasks
"""
from transformers import Trainer, is_torch_tpu_available
from transformers.trainer_utils import PredictionOutput
if is_torch_tpu_available():
import torch_xla.core.xla_model as xm
import torch_xla.debug.metrics as met
class QuestionAnsweringTrainer(Trainer):
def __init__(self, *args, eval_examples=None, post_process_function=None, **kwargs):
super().__init__(*args, **kwargs)
self.eval_examples = eval_examples
self.post_process_function = post_process_function
def evaluate(self, eval_dataset=None, eval_examples=None, ignore_keys=None, metric_key_prefix: str = "eval"):
eval_dataset = self.eval_dataset if eval_dataset is None else eval_dataset
eval_dataloader = self.get_eval_dataloader(eval_dataset)
eval_examples = self.eval_examples if eval_examples is None else eval_examples
# Temporarily disable metric computation, we will do it in the loop here.
compute_metrics = self.compute_metrics
self.compute_metrics = None
eval_loop = self.prediction_loop if self.args.use_legacy_prediction_loop else self.evaluation_loop
try:
output = eval_loop(
eval_dataloader,
description="Evaluation",
# No point gathering the predictions if there are no metrics, otherwise we defer to
# self.args.prediction_loss_only
prediction_loss_only=True if compute_metrics is None else None,
ignore_keys=ignore_keys,
)
finally:
self.compute_metrics = compute_metrics
if self.post_process_function is not None and self.compute_metrics is not None:
eval_preds = self.post_process_function(eval_examples, eval_dataset, output.predictions)
metrics = self.compute_metrics(eval_preds)
# Prefix all keys with metric_key_prefix + '_'
for key in list(metrics.keys()):
if not key.startswith(f"{metric_key_prefix}_"):
metrics[f"{metric_key_prefix}_{key}"] = metrics.pop(key)
self.log(metrics)
else:
metrics = {}
if self.args.tpu_metrics_debug or self.args.debug:
# tpu-comment: Logging debug metrics for PyTorch/XLA (compile, execute times, ops, etc.)
xm.master_print(met.metrics_report())
self.control = self.callback_handler.on_evaluate(self.args, self.state, self.control, metrics)
return metrics
def predict(self, predict_dataset, predict_examples, ignore_keys=None, metric_key_prefix: str = "test"):
predict_dataloader = self.get_test_dataloader(predict_dataset)
# Temporarily disable metric computation, we will do it in the loop here.
compute_metrics = self.compute_metrics
self.compute_metrics = None
eval_loop = self.prediction_loop if self.args.use_legacy_prediction_loop else self.evaluation_loop
try:
output = eval_loop(
predict_dataloader,
description="Prediction",
# No point gathering the predictions if there are no metrics, otherwise we defer to
# self.args.prediction_loss_only
prediction_loss_only=True if compute_metrics is None else None,
ignore_keys=ignore_keys,
)
finally:
self.compute_metrics = compute_metrics
if self.post_process_function is None or self.compute_metrics is None:
return output
predictions = self.post_process_function(predict_examples, predict_dataset, output.predictions, "predict")
metrics = self.compute_metrics(predictions)
# Prefix all keys with metric_key_prefix + '_'
for key in list(metrics.keys()):
if not key.startswith(f"{metric_key_prefix}_"):
metrics[f"{metric_key_prefix}_{key}"] = metrics.pop(key)
return PredictionOutput(predictions=predictions.predictions, label_ids=predictions.label_ids, metrics=metrics)
| 4,740 | 44.152381 | 118 | py |
robust-transformers | robust-transformers-main/examples/pytorch/question-answering/run_seq2seq_qa.py | #!/usr/bin/env python
# coding=utf-8
# Copyright 2021 The HuggingFace Team All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
"""
Fine-tuning the library's seq2seq models for question answering using the 🤗 Seq2SeqTrainer.
"""
# You can also adapt this script on your own question answering task. Pointers for this are left as comments.
import logging
import os
import sys
from dataclasses import dataclass, field
from typing import List, Optional, Tuple
import numpy as np
import copy
import re
import tqdm
import pdb
import json
import random
import datasets
from datasets import load_dataset, load_metric
from datasets import Dataset, DatasetDict
import transformers
from trainer_seq2seq_qa import QuestionAnsweringSeq2SeqTrainer
from transformers import (
AutoConfig,
AutoModelForSeq2SeqLM,
AutoTokenizer,
DataCollatorForSeq2Seq,
HfArgumentParser,
Seq2SeqTrainingArguments,
set_seed,
)
from transformers.trainer_utils import EvalLoopOutput, EvalPrediction, get_last_checkpoint
from transformers.utils import check_min_version
from transformers.utils.versions import require_version
# Will error if the minimal version of Transformers is not installed. Remove at your own risks.
check_min_version("4.18.0.dev0")
require_version("datasets>=1.8.0", "To fix: pip install -r examples/pytorch/question-answering/requirements.txt")
logger = logging.getLogger(__name__)
@dataclass
class ModelArguments:
"""
Arguments pertaining to which model/config/tokenizer we are going to fine-tune from.
"""
model_name_or_path: str = field(
metadata={"help": "Path to pretrained model or model identifier from huggingface.co/models"}
)
config_name: Optional[str] = field(
default=None, metadata={"help": "Pretrained config name or path if not the same as model_name"}
)
tokenizer_name: Optional[str] = field(
default=None, metadata={"help": "Pretrained tokenizer name or path if not the same as model_name"}
)
cache_dir: Optional[str] = field(
default=None,
metadata={"help": "Path to directory to store the pretrained models downloaded from huggingface.co"},
)
use_fast_tokenizer: bool = field(
default=True,
metadata={"help": "Whether to use one of the fast tokenizer (backed by the tokenizers library) or not."},
)
model_revision: str = field(
default="main",
metadata={"help": "The specific model version to use (can be a branch name, tag name or commit id)."},
)
use_auth_token: bool = field(
default=False,
metadata={
"help": "Will use the token generated when running `transformers-cli login` (necessary to use this script "
"with private models)."
},
)
@dataclass
class DataTrainingArguments:
"""
Arguments pertaining to what data we are going to input our model for training and eval.
"""
dataset_name: Optional[str] = field(
default=None, metadata={"help": "The name of the dataset to use (via the datasets library)."}
)
data_dir: Optional[str] = field(
default=None, metadata={"help": "Data folder for newsQA"}
)
no_answer_threshold: Optional[float] = field(
default=1.0, metadata={"help": "Custom no answer threshold for SQuAD 2.0."}
)
partial_inputs: Optional[str] = field(
default=None, metadata={"help": "which kind of partial input perturbation to make"}
)
question_only: Optional[bool] = field(
default=False, metadata={"help": "Question only training"}
)
passage_only: Optional[bool] = field(
default=False, metadata={"help": "Passage only training"}
)
augment_data: Optional[bool] = field(
default=False, metadata={"help": "Augment counterfactual data"}
)
partial_inputs_seed: Optional[int] = field(
default=1234, metadata={"help": "random seed for perturbation"}
)
dataset_config_name: Optional[str] = field(
default=None, metadata={"help": "The configuration name of the dataset to use (via the datasets library)."}
)
context_column: Optional[str] = field(
default="context",
metadata={"help": "The name of the column in the datasets containing the contexts (for question answering)."},
)
question_column: Optional[str] = field(
default="question",
metadata={"help": "The name of the column in the datasets containing the questions (for question answering)."},
)
answer_column: Optional[str] = field(
default="answers",
metadata={"help": "The name of the column in the datasets containing the answers (for question answering)."},
)
train_file: Optional[str] = field(default=None, metadata={"help": "The input training data file (a text file)."})
validation_file: Optional[str] = field(
default=None,
metadata={"help": "An optional input evaluation data file to evaluate the perplexity on (a text file)."},
)
test_file: Optional[str] = field(
default=None,
metadata={"help": "An optional input test data file to evaluate the perplexity on (a text file)."},
)
overwrite_cache: bool = field(
default=False, metadata={"help": "Overwrite the cached training and evaluation sets"}
)
preprocessing_num_workers: Optional[int] = field(
default=None,
metadata={"help": "The number of processes to use for the preprocessing."},
)
max_seq_length: int = field(
default=384,
metadata={
"help": "The maximum total input sequence length after tokenization. Sequences longer "
"than this will be truncated, sequences shorter will be padded."
},
)
max_answer_length: int = field(
default=30,
metadata={
"help": "The maximum length of an answer that can be generated. This is needed because the start "
"and end predictions are not conditioned on one another."
},
)
val_max_answer_length: Optional[int] = field(
default=None,
metadata={
"help": "The maximum total sequence length for validation target text after tokenization. Sequences longer "
"than this will be truncated, sequences shorter will be padded. Will default to `max_answer_length`."
"This argument is also used to override the ``max_length`` param of ``model.generate``, which is used "
"during ``evaluate`` and ``predict``."
},
)
pad_to_max_length: bool = field(
default=True,
metadata={
"help": "Whether to pad all samples to `max_seq_length`. "
"If False, will pad the samples dynamically when batching to the maximum length in the batch (which can "
"be faster on GPU but will be slower on TPU)."
},
)
max_train_samples: Optional[int] = field(
default=None,
metadata={
"help": "For debugging purposes or quicker training, truncate the number of training examples to this "
"value if set."
},
)
max_eval_samples: Optional[int] = field(
default=None,
metadata={
"help": "For debugging purposes or quicker training, truncate the number of evaluation examples to this "
"value if set."
},
)
max_predict_samples: Optional[int] = field(
default=None,
metadata={
"help": "For debugging purposes or quicker training, truncate the number of prediction examples to this "
"value if set."
},
)
version_2_with_negative: bool = field(
default=False, metadata={"help": "If true, some of the examples do not have an answer."}
)
null_score_diff_threshold: float = field(
default=0.0,
metadata={
"help": "The threshold used to select the null answer: if the best answer has a score that is less than "
"the score of the null answer minus this threshold, the null answer is selected for this example. "
"Only useful when `version_2_with_negative=True`."
},
)
doc_stride: int = field(
default=128,
metadata={"help": "When splitting up a long document into chunks, how much stride to take between chunks."},
)
n_best_size: int = field(
default=20,
metadata={"help": "The total number of n-best predictions to generate when looking for an answer."},
)
num_beams: Optional[int] = field(
default=None,
metadata={
"help": "Number of beams to use for evaluation. This argument will be passed to ``model.generate``, "
"which is used during ``evaluate`` and ``predict``."
},
)
ignore_pad_token_for_loss: bool = field(
default=True,
metadata={
"help": "Whether to ignore the tokens corresponding to padded labels in the loss computation or not."
},
)
def __post_init__(self):
if (
self.dataset_name is None
and self.train_file is None
and self.validation_file is None
and self.test_file is None
):
raise ValueError("Need either a dataset name or a training/validation file/test_file.")
else:
if self.train_file is not None:
extension = self.train_file.split(".")[-1]
assert extension in ["csv", "json"], "`train_file` should be a csv or a json file."
if self.validation_file is not None:
extension = self.validation_file.split(".")[-1]
assert extension in ["csv", "json"], "`validation_file` should be a csv or a json file."
if self.test_file is not None:
extension = self.test_file.split(".")[-1]
assert extension in ["csv", "json"], "`test_file` should be a csv or a json file."
if self.val_max_answer_length is None:
self.val_max_answer_length = self.max_answer_length
question_answering_column_name_mapping = {
"squad_v2": ("question", "context", "answer"),
}
def main():
# See all possible arguments in src/transformers/training_args.py
# or by passing the --help flag to this script.
# We now keep distinct sets of args, for a cleaner separation of concerns.
parser = HfArgumentParser((ModelArguments, DataTrainingArguments, Seq2SeqTrainingArguments))
if len(sys.argv) == 2 and sys.argv[1].endswith(".json"):
# If we pass only one argument to the script and it's the path to a json file,
# let's parse it to get our arguments.
model_args, data_args, training_args = parser.parse_json_file(json_file=os.path.abspath(sys.argv[1]))
else:
model_args, data_args, training_args = parser.parse_args_into_dataclasses()
# Setup logging
logging.basicConfig(
format="%(asctime)s - %(levelname)s - %(name)s - %(message)s",
datefmt="%m/%d/%Y %H:%M:%S",
handlers=[logging.StreamHandler(sys.stdout)],
)
log_level = training_args.get_process_log_level()
logger.setLevel(log_level)
datasets.utils.logging.set_verbosity(log_level)
transformers.utils.logging.set_verbosity(log_level)
transformers.utils.logging.enable_default_handler()
transformers.utils.logging.enable_explicit_format()
# Log on each process the small summary:
logger.warning(
f"Process rank: {training_args.local_rank}, device: {training_args.device}, n_gpu: {training_args.n_gpu}"
+ f"distributed training: {bool(training_args.local_rank != -1)}, 16-bits training: {training_args.fp16}"
)
logger.info(f"Training/evaluation parameters {training_args}")
# Detecting last checkpoint.
last_checkpoint = None
if os.path.isdir(training_args.output_dir) and training_args.do_train and not training_args.overwrite_output_dir:
last_checkpoint = get_last_checkpoint(training_args.output_dir)
if last_checkpoint is None and len(os.listdir(training_args.output_dir)) > 0:
raise ValueError(
f"Output directory ({training_args.output_dir}) already exists and is not empty. "
"Use --overwrite_output_dir to overcome."
)
elif last_checkpoint is not None and training_args.resume_from_checkpoint is None:
logger.info(
f"Checkpoint detected, resuming training at {last_checkpoint}. To avoid this behavior, change "
"the `--output_dir` or add `--overwrite_output_dir` to train from scratch."
)
# Set seed before initializing model.
set_seed(training_args.seed)
# Get the datasets: you can either provide your own CSV/JSON/TXT training and evaluation files (see below)
# or just provide the name of one of the public datasets available on the hub at https://huggingface.co/datasets/
# (the dataset will be downloaded automatically from the datasets Hub).
#
# For CSV/JSON files, this script will use the column called 'text' or the first column if no column called
# 'text' is found. You can easily tweak this behavior (see below).
#
# In distributed training, the load_dataset function guarantee that only one local process can concurrently
# download the dataset.
if data_args.dataset_name is not None:
# Downloading and loading a dataset from the hub.
if data_args.dataset_name == "newsqa_custom":
data_files = {
"train":os.path.join(data_args.data_dir, "train.json"),
"validation":os.path.join(data_args.data_dir, "validation.json"),
"test":os.path.join(data_args.data_dir, "test.json")}
raw_datasets = load_dataset("json", cache_dir=model_args.cache_dir, data_files=data_files)
else:
raw_datasets = load_dataset(
data_args.dataset_name, data_args.dataset_config_name, cache_dir=model_args.cache_dir
)
else:
data_files = {}
if data_args.train_file is not None:
data_files["train"] = data_args.train_file
extension = data_args.train_file.split(".")[-1]
if data_args.validation_file is not None:
data_files["validation"] = data_args.validation_file
extension = data_args.validation_file.split(".")[-1]
if data_args.test_file is not None:
data_files["test"] = data_args.test_file
extension = data_args.test_file.split(".")[-1]
raw_datasets = load_dataset(extension, data_files=data_files, field="data", cache_dir=model_args.cache_dir)
# See more about loading any type of standard or custom dataset (from files, python dict, pandas DataFrame, etc) at
# https://huggingface.co/docs/datasets/loading_datasets.html.
# Load pretrained model and tokenizer
#
# Distributed training:
# The .from_pretrained methods guarantee that only one local process can concurrently
# download model & vocab.
config = AutoConfig.from_pretrained(
model_args.config_name if model_args.config_name else model_args.model_name_or_path,
cache_dir=model_args.cache_dir,
revision=model_args.model_revision,
use_auth_token=True if model_args.use_auth_token else None,
)
tokenizer = AutoTokenizer.from_pretrained(
model_args.tokenizer_name if model_args.tokenizer_name else model_args.model_name_or_path,
cache_dir=model_args.cache_dir,
use_fast=True,
revision=model_args.model_revision,
use_auth_token=True if model_args.use_auth_token else None,
)
model = AutoModelForSeq2SeqLM.from_pretrained(
model_args.model_name_or_path,
from_tf=bool(".ckpt" in model_args.model_name_or_path),
config=config,
cache_dir=model_args.cache_dir,
revision=model_args.model_revision,
use_auth_token=True if model_args.use_auth_token else None,
)
model.resize_token_embeddings(len(tokenizer))
if model.config.decoder_start_token_id is None:
raise ValueError("Make sure that `config.decoder_start_token_id` is correctly defined")
new_datasets = {}
if data_args.dataset_name == 'duorc':
# raw_datasets["train"], raw_datasets["validation"], raw_datasets["test"] should be transformed to squad 2.0 format.
for split in ["train", "validation", "test"]:
new_dataset = {'id': [], 'context':[], 'question':[], 'answers': [], "title": []}
answers = raw_datasets[split]["answers"]
contexts = raw_datasets[split]["plot"]
no_answers = raw_datasets[split]["no_answer"]
for i, (ans, context, imp) in tqdm.tqdm(enumerate(zip(answers, contexts, no_answers))):
if not imp:
# answer exists
# for a in ans:
# start = None
# if a in context:
# start = context.find(a) #First occurrence may not be the best occurrence.
# new_dataset['id'].append(raw_datasets[split][i]["question_id"])
# new_dataset['question'].append(raw_datasets[split][i]["question"])
# new_dataset['context'].append(raw_datasets[split][i]["plot"])
# new_dataset['title'].append(raw_datasets[split][i]["title"])
# new_dataset['answers'].append({"text": [a], 'answer_start': [start]})
# # First occurrence of an answer in context.
# break
new_dataset['id'].append(raw_datasets[split][i]["question_id"])
new_dataset['question'].append(raw_datasets[split][i]["question"])
new_dataset['context'].append(raw_datasets[split][i]["plot"])
new_dataset['title'].append(raw_datasets[split][i]["title"])
new_dataset['answers'].append({"text": ans, 'answer_start': [0]*len(ans)})
else:
# answer does not exist.
new_dataset['id'].append(raw_datasets[split][i]["question_id"])
new_dataset['question'].append(raw_datasets[split][i]["question"])
new_dataset['context'].append(raw_datasets[split][i]["plot"])
new_dataset['title'].append(raw_datasets[split][i]["title"])
new_dataset['answers'].append({"text": [], 'answer_start': []})
# Create a new arrow dataset to replace raw_datasets.
new_datasets[split] = Dataset.from_dict(new_dataset)
raw_datasets = DatasetDict(new_datasets)
if data_args.dataset_name == 'newsqa_custom':
import uuid
new_datasets = {}
for split in ["train", "validation", "test"]:
new_dataset = {'id': [], 'context':[], 'question':[], 'answers': [], "title": [], "story_id": []}
answers = raw_datasets[split]["answers"]
contexts = raw_datasets[split]["story_text"]
questions = raw_datasets[split]["question_text"]
for i, (question, ans, context) in tqdm.tqdm(enumerate(zip(questions, answers, contexts))):
new_dataset['id'].append(uuid.uuid4().hex)
new_dataset['question'].append(raw_datasets[split][i]["question_text"])
new_dataset['context'].append(raw_datasets[split][i]["story_text"])
new_dataset['title'].append("")
new_dataset['story_id'].append(raw_datasets[split][i]["storyId"])
if "s" in ans and "e" in ans and ans['s'] != None:
answer_text = context[ans['s']:ans['e']].strip()
new_dataset['answers'].append({"text": [answer_text], 'answer_start': [ans['s']]})
else:
new_dataset['answers'].append({"text": [], 'answer_start': []})
# Create a new arrow dataset to replace raw_datasets.
new_datasets[split] = Dataset.from_dict(new_dataset)
raw_datasets = DatasetDict(new_datasets)
# Preprocessing the datasets.
# We need to generate and tokenize inputs and targets.
if training_args.do_train:
column_names = raw_datasets["train"].column_names
elif training_args.do_eval:
column_names = raw_datasets["validation"].column_names
elif training_args.do_predict:
column_names = raw_datasets["validation"].column_names
else:
logger.info("There is nothing to do. Please pass `do_train`, `do_eval` and/or `do_predict`.")
return
# Get the column names for input/target.
dataset_columns = question_answering_column_name_mapping.get(data_args.dataset_name, None)
if data_args.question_column is None:
question_column = dataset_columns[0] if dataset_columns is not None else column_names[0]
else:
question_column = data_args.question_column
if question_column not in column_names:
raise ValueError(
f"--question_column' value '{data_args.question_column}' needs to be one of: {', '.join(column_names)}"
)
if data_args.context_column is None:
context_column = dataset_columns[1] if dataset_columns is not None else column_names[1]
else:
context_column = data_args.context_column
if context_column not in column_names:
raise ValueError(
f"--context_column' value '{data_args.context_column}' needs to be one of: {', '.join(column_names)}"
)
if data_args.answer_column is None:
answer_column = dataset_columns[2] if dataset_columns is not None else column_names[2]
else:
answer_column = data_args.answer_column
if answer_column not in column_names:
raise ValueError(
f"--answer_column' value '{data_args.answer_column}' needs to be one of: {', '.join(column_names)}"
)
# Temporarily set max_answer_length for training.
max_answer_length = data_args.max_answer_length
padding = "max_length" if data_args.pad_to_max_length else False
if training_args.label_smoothing_factor > 0 and not hasattr(model, "prepare_decoder_input_ids_from_labels"):
logger.warning(
"label_smoothing is enabled but the `prepare_decoder_input_ids_from_labels` method is not defined for"
f"`{model.__class__.__name__}`. This will lead to loss being calculated twice and will take up more memory"
)
if data_args.max_seq_length > tokenizer.model_max_length:
logger.warning(
f"The max_seq_length passed ({data_args.max_seq_length}) is larger than the maximum length for the"
f"model ({tokenizer.model_max_length}). Using max_seq_length={tokenizer.model_max_length}."
)
max_seq_length = min(data_args.max_seq_length, tokenizer.model_max_length)
if data_args.augment_data:
train_dataset = raw_datasets["train"]
new_dataset = {'id': [], 'context':[], 'question':[], 'answers': [], "title": []}
titles = train_dataset["title"]
answers = train_dataset["answers"]
contexts = train_dataset["context"]
questions = train_dataset["question"]
for i, (title, question, ans, context) in tqdm.tqdm(enumerate(zip(titles, questions, answers, contexts))):
if len(ans['text']):
# This instance has an answer. So add another with a random qiestion.
while(1):
rand_idx = np.random.randint(len(questions))
if titles[rand_idx] != titles[i]:
new_question = questions[rand_idx]
break
# Add logic such that an additional is addded only with some probability.
new_dataset['context'].append(context)
new_dataset['id'].append(train_dataset[i]["id"])
new_dataset['question'].append(new_question)
new_dataset['title'].append(title)
new_dataset['answers'].append({'text': [], 'answer_start': []})
if 'story_id' in train_dataset[i]:
if 'story_id' not in new_dataset:
new_dataset['story_id'] = []
new_dataset['story_id'].append(train_dataset[i]["story_id"])
new_dataset['context'].append(context)
new_dataset['id'].append(train_dataset[i]["id"])
new_dataset['question'].append(question)
new_dataset['title'].append(title)
new_dataset['answers'].append(ans)
if 'story_id' in train_dataset[i]:
if 'story_id' not in new_dataset:
new_dataset['story_id'] = []
new_dataset['story_id'].append(train_dataset[i]["story_id"])
raw_datasets["train"] = Dataset.from_dict(new_dataset)
if data_args.question_only:
for split_name in ["train", "validation"]:
dataset = raw_datasets[split_name]
titles = dataset["title"]
answers = dataset["answers"]
contexts = dataset["context"]
questions = dataset["question"]
np.random.shuffle(contexts)
c = list(zip(titles, contexts))
np.random.shuffle(c)
titles, contexts = zip(*c)
new_dataset = {'id': [], 'context':[], 'question':[], 'answers': [], "title": []}
for i, (title, question, ans, context) in tqdm.tqdm(enumerate(zip(titles, questions, answers, contexts))):
if not len(ans['text']):
new_dataset['context'].append(context)
else:
ans_words = ans['text'][0].split()
context_words = context.split()
if len(context_words)-len(ans_words) <= 0:
new_context = ans_words
else:
random_location = np.random.randint(len(context_words)-len(ans_words))
new_context = context_words[:random_location] + ans_words + context_words[random_location + len(ans_words):]
new_context = " ".join(new_context)
new_dataset['context'].append(new_context)
new_dataset['id'].append(dataset[i]["id"])
new_dataset['question'].append(question)
new_dataset['title'].append(title)
new_dataset['answers'].append(ans)
if 'story_id' in dataset[i]:
if 'story_id' not in new_dataset:
new_dataset['story_id'] = []
new_dataset['story_id'].append(dataset[i]["story_id"])
raw_datasets[split_name] = Dataset.from_dict(new_dataset)
if data_args.passage_only:
for split_name in ["train", "validation"]:
dataset = raw_datasets[split_name]
titles = dataset["title"]
answers = dataset["answers"]
contexts = dataset["context"]
questions = dataset["question"]
new_dataset = {'id': [], 'context':[], 'question':[], 'answers': [], "title": []}
for i, (title, question, ans, context) in tqdm.tqdm(enumerate(zip(titles, questions, answers, contexts))):
new_dataset['context'].append(context)
new_dataset['id'].append(dataset[i]["id"])
new_dataset['question'].append("")
new_dataset['title'].append(title)
new_dataset['answers'].append(ans)
if 'story_id' in dataset[i]:
if 'story_id' not in new_dataset:
new_dataset['story_id'] = []
new_dataset['story_id'].append(dataset[i]["story_id"])
raw_datasets[split_name] = Dataset.from_dict(new_dataset)
def preprocess_squad_batch(
examples,
question_column: str,
context_column: str,
answer_column: str,
) -> Tuple[List[str], List[str]]:
questions = examples[question_column]
contexts = examples[context_column]
answers = examples[answer_column]
def generate_input(_question, _context):
return " ".join(["question:", _question.lstrip(), "context:", _context.lstrip()])
inputs = [generate_input(question, context) for question, context in zip(questions, contexts)]
targets = [answer["text"][0] if len(answer["text"]) > 0 else "" for answer in answers]
return inputs, targets
def preprocess_function(examples):
inputs, targets = preprocess_squad_batch(examples, question_column, context_column, answer_column)
model_inputs = tokenizer(inputs, max_length=max_seq_length, padding=padding, truncation=True)
# Setup the tokenizer for targets
with tokenizer.as_target_tokenizer():
labels = tokenizer(targets, max_length=max_answer_length, padding=padding, truncation=True)
# For longer datasets we should ideally provide that context which contains the answer.
# If we are padding here, replace all tokenizer.pad_token_id in the labels by -100 when we want to ignore
# padding in the loss.
if padding == "max_length" and data_args.ignore_pad_token_for_loss:
labels["input_ids"] = [
[(l if l != tokenizer.pad_token_id else -100) for l in label] for label in labels["input_ids"]
]
model_inputs["labels"] = labels["input_ids"]
return model_inputs
# Validation preprocessing
def preprocess_validation_function(examples):
inputs, targets = preprocess_squad_batch(examples, question_column, context_column, answer_column)
model_inputs = tokenizer(
inputs,
max_length=max_seq_length,
padding=padding,
truncation=True,
return_overflowing_tokens=True,
return_offsets_mapping=True,
)
# # Setup the tokenizer for targets
# with tokenizer.as_target_tokenizer():
# labels = tokenizer(targets, max_length=max_answer_length, padding=padding, truncation=True)
# Tokenize targets with the `text_target` keyword argument
with tokenizer.as_target_tokenizer():
labels = tokenizer(targets, max_length=max_answer_length, padding=padding, truncation=True)
# If we are padding here, replace all tokenizer.pad_token_id in the labels by -100 when we want to ignore
# padding in the loss.
if padding == "max_length" and data_args.ignore_pad_token_for_loss:
labels["input_ids"] = [
[(l if l != tokenizer.pad_token_id else -100) for l in label] for label in labels["input_ids"]
]
# Since one example might give us several features if it has a long context, we need a map from a feature to
# its corresponding example. This key gives us just that.
sample_mapping = model_inputs.pop("overflow_to_sample_mapping")
# For evaluation, we will need to convert our predictions to substrings of the context, so we keep the
# corresponding example_id and we will store the offset mappings.
model_inputs["example_id"] = []
# Augment the overflowing tokens to the labels
labels_out = []
for i in range(len(model_inputs["input_ids"])):
# One example can give several spans, this is the index of the example containing this span of text.
sample_index = sample_mapping[i]
model_inputs["example_id"].append(examples["id"][sample_index])
labels_out.append(labels["input_ids"][sample_index])
# If we are padding here, replace all tokenizer.pad_token_id in the labels by -100 when we want to ignore
# padding in the loss.
# if padding == "max_length" and data_args.ignore_pad_token_for_loss:
# labels["input_ids"] = [
# [(l if l != tokenizer.pad_token_id else -100) for l in label] for label in labels["input_ids"]
# ]
model_inputs["labels"] = labels_out
# model_inputs["labels"] = labels["input_ids"]
return model_inputs
if training_args.do_train:
if "train" not in raw_datasets:
raise ValueError("--do_train requires a train dataset")
train_dataset = raw_datasets["train"]
if data_args.max_train_samples is not None:
# We will select sample from whole data if agument is specified
train_dataset = train_dataset.select(range(data_args.max_train_samples))
# Create train feature from dataset
with training_args.main_process_first(desc="train dataset map pre-processing"):
train_dataset = train_dataset.map(
preprocess_function,
batched=True,
num_proc=data_args.preprocessing_num_workers,
remove_columns=column_names,
load_from_cache_file=not data_args.overwrite_cache,
desc="Running tokenizer on train dataset",
)
if data_args.max_train_samples is not None:
# Number of samples might increase during Feature Creation, We select only specified max samples
train_dataset = train_dataset.select(range(data_args.max_train_samples))
# Define question transformation functions over huggingface datasets
# Previous question
def prev_questions(eval_dataset):
all_questions = [ex["question"] for ex in eval_dataset]
all_titles = [ex["title"] for ex in eval_dataset]
new_questions = []
for i, q in enumerate(range(1, len(all_questions))):
new_questions.append(all_questions[i-1])
new_questions.append(all_questions[0])
eval_dataset = eval_dataset.remove_columns(["question"])
eval_dataset = eval_dataset.add_column("question", new_questions)
return eval_dataset
# no Question
def no_questions(eval_dataset):
# Replace question with title
all_questions = [ex["question"] for ex in eval_dataset]
all_titles = [ex["title"] for ex in eval_dataset]
new_dataset = {'id': [], 'context':[], 'question':[], 'answers': [], "title": []}
for i, q in enumerate(range(len(all_questions))):
ex = eval_dataset[i]
answer_text = ex["answers"]["text"][0] if len(ex["answers"]["text"]) else ""
if answer_text != "":
new_dataset['context'].append(eval_dataset[i]["context"])
new_dataset['id'].append(eval_dataset[i]["id"])
new_dataset['question'].append(all_titles[i])
new_dataset['title'].append(eval_dataset[i]["title"])
if 'story_id' in eval_dataset[i]:
if 'story_id' not in new_dataset:
new_dataset['story_id'] = []
new_dataset['story_id'].append(eval_dataset[i]["story_id"])
new_dataset['answers'].append({'text': [], 'answer_start': []})
eval_dataset = Dataset.from_dict(new_dataset)
return eval_dataset
def same_para_questions(eval_dataset, seed=1234):
all_questions = [ex["question"] for ex in eval_dataset]
if "story_id" in eval_dataset[0]:
all_titles = [ex["story_id"] for ex in eval_dataset]
else:
all_titles = [ex["title"] for ex in eval_dataset]
all_ids = [ex["id"] for ex in eval_dataset]
id_dict = {ex["id"]:ex for ex in eval_dataset}
new_questions = []
new_answers = []
title_question_dict = {}
title_dict = {}
random.seed(seed)
new_dataset = {'id': [], 'context':[], 'question':[], 'answers': [], "title": []}
for i in range(0, len(all_titles)):
t = all_titles[i]
if t in title_dict:
title_dict[t].append(all_ids[i])
else:
title_dict[t] = [all_ids[i]]
for title in title_dict:
ids = title_dict[title]
shuffled = sorted(ids, key=lambda k: random.random())
for id_, new_id in zip(ids, shuffled):
ex = id_dict[id_]
new_ex = id_dict[new_id]
answer_text = ex["answers"]["text"][0] if len(ex["answers"]["text"]) else ""
if answer_text != "":
# This is the subset that needs to be flipped to no answer
new_dataset['context'].append(ex["context"])
new_dataset['id'].append(ex["id"])
new_dataset['question'].append(new_ex["question"])
new_dataset['title'].append(ex["title"])
if 'story_id' in eval_dataset[i]:
if 'story_id' not in new_dataset:
new_dataset['story_id'] = []
new_dataset['story_id'].append(ex["story_id"])
if ex["answers"]['text'] != new_ex["answers"]['text']:
new_dataset['answers'].append({'text': [], 'answer_start': []})
else:
new_dataset['answers'].append(ex["answers"])
# swap questions with different contexts.
# context_dict = {}
# for id_ in title_dict[title]:
# ex = id_dict[id_]
# if ex["context"] in context_dict:
# context_dict[ex["context"]].append(ex)
# else:
# context_dict[ex["context"]] = [ex]
# if len(title_dict[title]) > 1 and len(context_dict) > 1:
# pdb.set_trace()
eval_dataset = Dataset.from_dict(new_dataset)
return eval_dataset
def random_questions(eval_dataset, seed=1234):
all_questions = [ex["question"] for ex in eval_dataset]
all_answer_texts = [ex["answers"]["text"][0] if len(ex["answers"]["text"]) else "" for ex in eval_dataset]
if "story_id" in eval_dataset[0]:
all_titles = [ex["story_id"] for ex in eval_dataset]
else:
all_titles = [ex["title"] for ex in eval_dataset]
new_questions = []
new_answers = []
np.random.seed(seed)
new_dataset = {'id': [], 'context':[], 'question':[], 'answers': [], "title": []}
for i, q in enumerate(range(0, len(all_questions))):
answer_text = all_answer_texts[i]
while(1):
rand_idx = np.random.randint(len(all_questions))
if all_titles[rand_idx] != all_titles[i]:
new_question = all_questions[rand_idx]
break
if answer_text != "":
# This is the subset that needs to be flipped to no answer
# new_answers.append({'text': [], 'answer_start': []})
# new_questions.append(new_question)
new_dataset['context'].append(eval_dataset[i]["context"])
new_dataset['id'].append(eval_dataset[i]["id"])
new_dataset['question'].append(new_question)
new_dataset['title'].append(eval_dataset[i]["title"])
if 'story_id' in eval_dataset[i]:
if 'story_id' not in new_dataset:
new_dataset['story_id'] = []
new_dataset['story_id'].append(eval_dataset[i]["story_id"])
new_dataset['answers'].append({'text': [], 'answer_start': []})
# eval_dataset = eval_dataset.remove_columns(["question"])
# eval_dataset = eval_dataset.add_column("question", new_questions)
# eval_dataset = eval_dataset.remove_columns(["answers"])
# eval_dataset = eval_dataset.add_column("answers", new_answers)
eval_dataset = Dataset.from_dict(new_dataset)
return eval_dataset
if training_args.do_eval:
if "validation" not in raw_datasets:
raise ValueError("--do_eval requires a validation dataset")
eval_examples = raw_datasets["validation"]
if data_args.max_eval_samples is not None:
# We will select sample from whole data
eval_examples = eval_examples.select(range(data_args.max_eval_samples))
# Partial-input perturbation
if data_args.partial_inputs == "no":
eval_examples = no_questions(eval_examples)
elif data_args.partial_inputs == "previous":
eval_examples = prev_questions(eval_examples)
elif data_args.partial_inputs == "random":
eval_examples = random_questions(eval_examples, data_args.partial_inputs_seed)
elif data_args.partial_inputs == "same_title":
eval_examples = same_para_questions(eval_examples, data_args.partial_inputs_seed)
# Validation Feature Creation
with training_args.main_process_first(desc="validation dataset map pre-processing"):
eval_dataset = eval_examples.map(
preprocess_validation_function,
batched=True,
num_proc=data_args.preprocessing_num_workers,
remove_columns=column_names,
load_from_cache_file=not data_args.overwrite_cache,
desc="Running tokenizer on validation dataset",
)
if data_args.max_eval_samples is not None:
# During Feature creation dataset samples might increase, we will select required samples again
eval_dataset = eval_dataset.select(range(data_args.max_eval_samples))
if training_args.do_predict:
if "validation" not in raw_datasets:
raise ValueError("--do_predict requires a test dataset")
predict_examples = raw_datasets["validation"]
if data_args.max_predict_samples is not None:
# We will select sample from whole data
predict_examples = predict_examples.select(range(data_args.max_predict_samples))
# Predict Feature Creation
# Partial-input perturbation
if data_args.partial_inputs == "no":
predict_examples = no_questions(predict_examples)
elif data_args.partial_inputs == "previous":
predict_examples = prev_questions(predict_examples)
elif data_args.partial_inputs == "random":
predict_examples = random_questions(predict_examples)
elif data_args.partial_inputs == "same_title":
predict_examples = same_para_questions(predict_examples)
with training_args.main_process_first(desc="prediction dataset map pre-processing"):
predict_dataset = predict_examples.map(
preprocess_validation_function,
batched=True,
num_proc=data_args.preprocessing_num_workers,
remove_columns=column_names,
load_from_cache_file=not data_args.overwrite_cache,
desc="Running tokenizer on prediction dataset",
)
if data_args.max_predict_samples is not None:
# During Feature creation dataset samples might increase, we will select required samples again
predict_dataset = predict_dataset.select(range(data_args.max_predict_samples))
# Data collator
label_pad_token_id = -100 if data_args.ignore_pad_token_for_loss else tokenizer.pad_token_id
data_collator = DataCollatorForSeq2Seq(
tokenizer,
model=model,
label_pad_token_id=label_pad_token_id,
pad_to_multiple_of=8 if training_args.fp16 else None,
)
metric = load_metric("squad_v2" if data_args.version_2_with_negative else "squad")
def compute_metrics(p: EvalPrediction):
return metric.compute(predictions=p.predictions, references=p.label_ids, no_answer_threshold=data_args.no_answer_threshold)
# Post-processing:
def post_processing_function(
examples: datasets.Dataset, features: datasets.Dataset, outputs: EvalLoopOutput, stage="eval"
):
# Decode the predicted tokens.
if type(outputs) == np.ndarray:
preds = outputs
else:
preds = outputs.predictions
if isinstance(preds, tuple):
preds = preds[0]
decoded_preds = tokenizer.batch_decode(preds, skip_special_tokens=True)
# Build a map example to its corresponding features.
example_id_to_index = {k: i for i, k in enumerate(examples["id"])}
# feature_per_example = {example_id_to_index[feature["example_id"]]: i for i, feature in enumerate(features)}
feature_per_example = {}
for i, feature in enumerate(features):
if example_id_to_index[feature["example_id"]] not in feature_per_example:
# The earlist feature is used.
feature_per_example[example_id_to_index[feature["example_id"]]] = i
predictions = {}
# Let's loop over all the examples!
for example_index, example in enumerate(examples):
# This is the index of the feature associated to the current example.
if example_index not in feature_per_example:
continue
feature_index = feature_per_example[example_index]
# predictions over multiple features are getting overwritten here.
predictions[example["id"]] = decoded_preds[feature_index]
# Format the result to the format the metric expects.
if data_args.version_2_with_negative:
formatted_predictions = [
{"id": k, "prediction_text": v, "no_answer_probability": 0.0} for k, v in predictions.items()
]
else:
formatted_predictions = [{"id": k, "prediction_text": v} for k, v in predictions.items()]
references = [{"id": ex["id"], "answers": ex[answer_column]} for ex in examples]
return EvalPrediction(predictions=formatted_predictions, label_ids=references[:len(formatted_predictions)])
# Initialize our Trainer
trainer = QuestionAnsweringSeq2SeqTrainer(
model=model,
args=training_args,
train_dataset=train_dataset if training_args.do_train else None,
eval_dataset=eval_dataset if training_args.do_eval else None,
eval_examples=eval_examples if training_args.do_eval else None,
tokenizer=tokenizer,
data_collator=data_collator,
compute_metrics=compute_metrics,
post_process_function=post_processing_function,
)
# Training
if training_args.do_train:
checkpoint = None
if training_args.resume_from_checkpoint is not None:
checkpoint = training_args.resume_from_checkpoint
elif last_checkpoint is not None:
checkpoint = last_checkpoint
train_result = trainer.train(resume_from_checkpoint=checkpoint)
trainer.save_model() # Saves the tokenizer too for easy upload
metrics = train_result.metrics
max_train_samples = (
data_args.max_train_samples if data_args.max_train_samples is not None else len(train_dataset)
)
metrics["train_samples"] = min(max_train_samples, len(train_dataset))
trainer.log_metrics("train", metrics)
trainer.save_metrics("train", metrics)
trainer.save_state()
# Evaluation
results = {}
max_length = (
training_args.generation_max_length
if training_args.generation_max_length is not None
else data_args.val_max_answer_length
)
num_beams = data_args.num_beams if data_args.num_beams is not None else training_args.generation_num_beams
if training_args.do_eval:
logger.info("*** Evaluate ***")
metrics = trainer.evaluate(max_length=max_length, num_beams=num_beams, metric_key_prefix="eval")
max_eval_samples = data_args.max_eval_samples if data_args.max_eval_samples is not None else len(eval_dataset)
metrics["eval_samples"] = min(max_eval_samples, len(eval_dataset))
trainer.log_metrics("eval", metrics)
trainer.save_metrics("eval", metrics)
# Prediction
if training_args.do_predict:
logger.info("*** Predict ***")
results = trainer.predict(predict_dataset, predict_examples)
metrics = results.metrics
max_predict_samples = (
data_args.max_predict_samples if data_args.max_predict_samples is not None else len(predict_dataset)
)
metrics["predict_samples"] = min(max_predict_samples, len(predict_dataset))
trainer.log_metrics("predict", metrics)
trainer.save_metrics("predict", metrics)
with open(os.path.join(training_args.output_dir, "predictions.jsonl"), "w") as fout:
predictions = results.predictions
for example, pred in zip(predict_examples, predictions):
assert example['id'] == pred['id']
example['prediction_text'] = pred['prediction_text']
example['no_answer_probability'] = pred['no_answer_probability']
fout.write(json.dumps(example) + "\n")
if training_args.push_to_hub:
kwargs = {"finetuned_from": model_args.model_name_or_path, "tasks": "question-answering"}
if data_args.dataset_name is not None:
kwargs["dataset_tags"] = data_args.dataset_name
if data_args.dataset_config_name is not None:
kwargs["dataset_args"] = data_args.dataset_config_name
kwargs["dataset"] = f"{data_args.dataset_name} {data_args.dataset_config_name}"
else:
kwargs["dataset"] = data_args.dataset_name
trainer.push_to_hub(**kwargs)
def _mp_fn(index):
# For xla_spawn (TPUs)
main()
if __name__ == "__main__":
main()
| 50,543 | 46.105312 | 136 | py |
robust-transformers | robust-transformers-main/examples/pytorch/question-answering/run_qa_beam_search.py | #!/usr/bin/env python
# coding=utf-8
# Copyright 2020 The HuggingFace Team All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
"""
Fine-tuning XLNet for question answering with beam search using a slightly adapted version of the 🤗 Trainer.
"""
# You can also adapt this script on your own question answering task. Pointers for this are left as comments.
import logging
import os
import sys
from dataclasses import dataclass, field
from typing import Optional
import copy
import numpy as np
import pdb
import re
import tqdm
import random
import pdb
import datasets
from datasets import load_dataset, load_metric
from datasets import Dataset, DatasetDict
import transformers
# from transformers.utils.dummy_pt_objects import AutoModelForQuestionAnswering
from trainer_qa import QuestionAnsweringTrainer
from transformers import (
DataCollatorWithPadding,
EvalPrediction,
HfArgumentParser,
TrainingArguments,
XLNetConfig,
XLNetForQuestionAnswering,
XLNetTokenizerFast,
AutoTokenizer,
AutoConfig,
AutoModelForQuestionAnswering,
default_data_collator,
set_seed,
)
from transformers.trainer_utils import get_last_checkpoint
from transformers.utils import check_min_version
from transformers.utils.versions import require_version
from utils_qa import postprocess_qa_predictions_with_beam_search
# Will error if the minimal version of Transformers is not installed. Remove at your own risks.
check_min_version("4.18.0.dev0")
require_version("datasets>=1.8.0", "To fix: pip install -r examples/pytorch/question-answering/requirements.txt")
logger = logging.getLogger(__name__)
@dataclass
class ModelArguments:
"""
Arguments pertaining to which model/config/tokenizer we are going to fine-tune from.
"""
model_name_or_path: str = field(
metadata={"help": "Path to pretrained model or model identifier from huggingface.co/models"}
)
config_name: Optional[str] = field(
default=None, metadata={"help": "Pretrained config name or path if not the same as model_name"}
)
tokenizer_name: Optional[str] = field(
default=None, metadata={"help": "Pretrained tokenizer name or path if not the same as model_name"}
)
cache_dir: Optional[str] = field(
default=None,
metadata={"help": "Where do you want to store the pretrained models downloaded from huggingface.co"},
)
model_revision: str = field(
default="main",
metadata={"help": "The specific model version to use (can be a branch name, tag name or commit id)."},
)
use_auth_token: bool = field(
default=False,
metadata={
"help": "Will use the token generated when running `transformers-cli login` (necessary to use this script "
"with private models)."
},
)
@dataclass
class DataTrainingArguments:
"""
Arguments pertaining to what data we are going to input our model for training and eval.
"""
dataset_name: Optional[str] = field(
default=None, metadata={"help": "The name of the dataset to use (via the datasets library)."}
)
data_dir: Optional[str] = field(
default=None, metadata={"help": "Data folder for newsQA"}
)
no_answer_threshold: Optional[float] = field(
default=1.0, metadata={"help": "Custom no answer threshold for SQuAD 2.0."}
)
partial_inputs: Optional[str] = field(
default=None, metadata={"help": "which kind of partial input perturbation to make"}
)
partial_inputs_seed: Optional[int] = field(
default=1234, metadata={"help": "random seed for perturbation"}
)
question_only: Optional[bool] = field(
default=False, metadata={"help": "Question only training"}
)
passage_only: Optional[bool] = field(
default=False, metadata={"help": "Passage only training"}
)
dataset_config_name: Optional[str] = field(
default=None, metadata={"help": "The configuration name of the dataset to use (via the datasets library)."}
)
train_file: Optional[str] = field(default=None, metadata={"help": "The input training data file (a text file)."})
validation_file: Optional[str] = field(
default=None,
metadata={"help": "An optional input evaluation data file to evaluate the perplexity on (a text file)."},
)
test_file: Optional[str] = field(
default=None,
metadata={"help": "An optional input test data file to test the perplexity on (a text file)."},
)
overwrite_cache: bool = field(
default=False, metadata={"help": "Overwrite the cached training and evaluation sets"}
)
preprocessing_num_workers: Optional[int] = field(
default=None,
metadata={"help": "The number of processes to use for the preprocessing."},
)
max_seq_length: int = field(
default=384,
metadata={
"help": "The maximum total input sequence length after tokenization. Sequences longer "
"than this will be truncated, sequences shorter will be padded."
},
)
pad_to_max_length: bool = field(
default=True,
metadata={
"help": "Whether to pad all samples to `max_seq_length`. "
"If False, will pad the samples dynamically when batching to the maximum length in the batch (which can "
"be faster on GPU but will be slower on TPU)."
},
)
max_train_samples: Optional[int] = field(
default=None,
metadata={
"help": "For debugging purposes or quicker training, truncate the number of training examples to this "
"value if set."
},
)
max_eval_samples: Optional[int] = field(
default=None,
metadata={
"help": "For debugging purposes or quicker training, truncate the number of evaluation examples to this "
"value if set."
},
)
max_predict_samples: Optional[int] = field(
default=None,
metadata={
"help": "For debugging purposes or quicker training, truncate the number of prediction examples to this "
"value if set."
},
)
version_2_with_negative: bool = field(
default=False, metadata={"help": "If true, some of the examples do not have an answer."}
)
null_score_diff_threshold: float = field(
default=0.0,
metadata={
"help": "The threshold used to select the null answer: if the best answer has a score that is less than "
"the score of the null answer minus this threshold, the null answer is selected for this example. "
"Only useful when `version_2_with_negative=True`."
},
)
doc_stride: int = field(
default=128,
metadata={"help": "When splitting up a long document into chunks, how much stride to take between chunks."},
)
n_best_size: int = field(
default=20,
metadata={"help": "The total number of n-best predictions to generate when looking for an answer."},
)
max_answer_length: int = field(
default=30,
metadata={
"help": "The maximum length of an answer that can be generated. This is needed because the start "
"and end predictions are not conditioned on one another."
},
)
def __post_init__(self):
if (
self.dataset_name is None
and self.train_file is None
and self.validation_file is None
and self.test_file is None
):
raise ValueError("Need either a dataset name or a training/validation/test file.")
else:
if self.train_file is not None:
extension = self.train_file.split(".")[-1]
assert extension in ["csv", "json"], "`train_file` should be a csv or a json file."
if self.validation_file is not None:
extension = self.validation_file.split(".")[-1]
assert extension in ["csv", "json"], "`validation_file` should be a csv or a json file."
if self.test_file is not None:
extension = self.test_file.split(".")[-1]
assert extension in ["csv", "json"], "`test_file` should be a csv or a json file."
def main():
# See all possible arguments in src/transformers/training_args.py
# or by passing the --help flag to this script.
# We now keep distinct sets of args, for a cleaner separation of concerns.
parser = HfArgumentParser((ModelArguments, DataTrainingArguments, TrainingArguments))
if len(sys.argv) == 2 and sys.argv[1].endswith(".json"):
# If we pass only one argument to the script and it's the path to a json file,
# let's parse it to get our arguments.
model_args, data_args, training_args = parser.parse_json_file(json_file=os.path.abspath(sys.argv[1]))
else:
model_args, data_args, training_args = parser.parse_args_into_dataclasses()
# Setup logging
logging.basicConfig(
format="%(asctime)s - %(levelname)s - %(name)s - %(message)s",
datefmt="%m/%d/%Y %H:%M:%S",
handlers=[logging.StreamHandler(sys.stdout)],
)
log_level = training_args.get_process_log_level()
logger.setLevel(log_level)
datasets.utils.logging.set_verbosity(log_level)
transformers.utils.logging.set_verbosity(log_level)
transformers.utils.logging.enable_default_handler()
transformers.utils.logging.enable_explicit_format()
# Log on each process the small summary:
logger.warning(
f"Process rank: {training_args.local_rank}, device: {training_args.device}, n_gpu: {training_args.n_gpu}"
+ f"distributed training: {bool(training_args.local_rank != -1)}, 16-bits training: {training_args.fp16}"
)
logger.info(f"Training/evaluation parameters {training_args}")
# Detecting last checkpoint.
last_checkpoint = None
if os.path.isdir(training_args.output_dir) and training_args.do_train and not training_args.overwrite_output_dir:
last_checkpoint = get_last_checkpoint(training_args.output_dir)
if last_checkpoint is None and len(os.listdir(training_args.output_dir)) > 0:
raise ValueError(
f"Output directory ({training_args.output_dir}) already exists and is not empty. "
"Use --overwrite_output_dir to overcome."
)
elif last_checkpoint is not None and training_args.resume_from_checkpoint is None:
logger.info(
f"Checkpoint detected, resuming training at {last_checkpoint}. To avoid this behavior, change "
"the `--output_dir` or add `--overwrite_output_dir` to train from scratch."
)
# Set seed before initializing model.
set_seed(training_args.seed)
# Get the datasets: you can either provide your own CSV/JSON/TXT training and evaluation files (see below)
# or just provide the name of one of the public datasets available on the hub at https://huggingface.co/datasets/
# (the dataset will be downloaded automatically from the datasets Hub).
#
# For CSV/JSON files, this script will use the column called 'text' or the first column if no column called
# 'text' is found. You can easily tweak this behavior (see below).
#
# In distributed training, the load_dataset function guarantee that only one local process can concurrently
# download the dataset.
if data_args.dataset_name is not None:
# Downloading and loading a dataset from the hub.
if data_args.dataset_name == "newsqa_custom":
data_files = {
"train":os.path.join(data_args.data_dir, "train.json"),
"validation":os.path.join(data_args.data_dir, "validation.json"),
"test":os.path.join(data_args.data_dir, "test.json")}
raw_datasets = load_dataset("json", cache_dir=model_args.cache_dir, data_files=data_files)
else:
raw_datasets = load_dataset(
data_args.dataset_name, data_args.dataset_config_name, cache_dir=model_args.cache_dir
)
else:
data_files = {}
if data_args.train_file is not None:
data_files["train"] = data_args.train_file
extension = data_args.train_file.split(".")[-1]
if data_args.validation_file is not None:
data_files["validation"] = data_args.validation_file
extension = data_args.validation_file.split(".")[-1]
if data_args.test_file is not None:
data_files["test"] = data_args.test_file
extension = data_args.test_file.split(".")[-1]
raw_datasets = load_dataset(extension, data_files=data_files, field="data", cache_dir=model_args.cache_dir)
# See more about loading any type of standard or custom dataset (from files, python dict, pandas DataFrame, etc) at
# https://huggingface.co/docs/datasets/loading_datasets.html.
# Load pretrained model and tokenizer
#
# Distributed training:
# The .from_pretrained methods guarantee that only one local process can concurrently
# download model & vocab.
config = AutoConfig.from_pretrained(
model_args.config_name if model_args.config_name else model_args.model_name_or_path,
cache_dir=model_args.cache_dir,
revision=model_args.model_revision,
use_auth_token=True if model_args.use_auth_token else None,
)
tokenizer = AutoTokenizer.from_pretrained(
model_args.tokenizer_name if model_args.tokenizer_name else model_args.model_name_or_path,
cache_dir=model_args.cache_dir,
# use_fast=True,
revision=model_args.model_revision,
use_auth_token=True if model_args.use_auth_token else None,
)
model = AutoModelForQuestionAnswering.from_pretrained(
model_args.model_name_or_path,
from_tf=bool(".ckpt" in model_args.model_name_or_path),
config=config,
cache_dir=model_args.cache_dir,
revision=model_args.model_revision,
use_auth_token=True if model_args.use_auth_token else None,
)
## SQUAD 2.0
# {'id': '56be85543aeaaa14008c9063', 'title': 'Beyoncé',
# 'context': 'Beyoncé Giselle Knowles-Carter (/biːˈjɒnseɪ/ bee-YON-say) (born September 4, 1981) is an American singer, songwriter, record producer and actress. Born and raised in Houston, Texas, she performed in various singing and dancing competitions as a child, and rose to fame in the late 1990s as lead singer of R&B girl-group Destiny\'s Child. Managed by her father, Mathew Knowles, the group became one of the world\'s best-selling girl groups of all time. Their hiatus saw the release of Beyoncé\'s debut album, Dangerously in Love (2003), which established her as a solo artist worldwide, earned five Grammy Awards and featured the Billboard Hot 100 number-one singles "Crazy in Love" and "Baby Boy".', 'question': 'When did Beyonce start becoming popular?',
# 'answers': {'text': ['in the late 1990s'], 'answer_start': [269]}}
## SQUAD 2.0 (unanswerable)
# {'id': '5a7e070b70df9f001a87543d', 'title': 'Matter',
#'context': 'The term "matter" is used throughout physics in a bewildering variety of contexts: for example, one refers to "condensed matter physics", "elementary matter", "partonic" matter, "dark" matter, "anti"-matter, "strange" matter, and "nuclear" matter. In discussions of matter and antimatter, normal matter has been referred to by Alfvén as koinomatter (Gk. common matter). It is fair to say that in physics, there is no broad consensus as to a general definition of matter, and the term "matter" usually is used in conjunction with a specifying modifier.',
# 'question': 'What field of study has a variety of unusual contexts?',
# 'answers': {'text': [], 'answer_start': []}}
# DuoRC
## ['plot_id', 'plot', 'title', 'question_id', 'question', 'answers', 'no_answer']
# NewsQA
## ['story_id', 'story_text', 'question', 'answer_token_ranges']
if data_args.dataset_name == 'duorc':
new_datasets = {}
# raw_datasets["train"], raw_datasets["validation"], raw_datasets["test"] should be transformed to squad 2.0 format.
for split in ["train", "validation", "test"]:
new_dataset = {'id': [], 'context':[], 'question':[], 'answers': [], "title": []}
answers = raw_datasets[split]["answers"]
contexts = raw_datasets[split]["plot"]
no_answers = raw_datasets[split]["no_answer"]
for i, (ans, context, imp) in tqdm.tqdm(enumerate(zip(answers, contexts, no_answers))):
if not imp:
# answer exists
for a in ans:
start = None
if a in context:
start = context.find(a)
new_dataset['id'].append(raw_datasets[split][i]["question_id"])
new_dataset['question'].append(raw_datasets[split][i]["question"])
new_dataset['context'].append(raw_datasets[split][i]["plot"])
new_dataset['title'].append(raw_datasets[split][i]["title"])
new_dataset['answers'].append({"text": [a], 'answer_start': [start]})
# First occurrence of an answer in context.
break
else:
# answer does not exist.
new_dataset['id'].append(raw_datasets[split][i]["question_id"])
new_dataset['question'].append(raw_datasets[split][i]["question"])
new_dataset['context'].append(raw_datasets[split][i]["plot"])
new_dataset['title'].append(raw_datasets[split][i]["title"])
new_dataset['answers'].append({"text": [], 'answer_start': []})
# Create a new arrow dataset to replace raw_datasets.
new_datasets[split] = Dataset.from_dict(new_dataset)
raw_datasets = DatasetDict(new_datasets)
if data_args.dataset_name == 'newsqa_custom':
import uuid
new_datasets = {}
for split in ["train", "validation", "test"]:
new_dataset = {'id': [], 'context':[], 'question':[], 'answers': [], "title": [], "story_id": []}
answers = raw_datasets[split]["answers"]
contexts = raw_datasets[split]["story_text"]
questions = raw_datasets[split]["question_text"]
for i, (question, ans, context) in tqdm.tqdm(enumerate(zip(questions, answers, contexts))):
new_dataset['id'].append(uuid.uuid4().hex)
new_dataset['question'].append(raw_datasets[split][i]["question_text"])
new_dataset['context'].append(raw_datasets[split][i]["story_text"])
new_dataset['title'].append("")
new_dataset['story_id'].append(raw_datasets[split][i]["storyId"])
if "s" in ans and "e" in ans and ans['s'] != None:
answer_text = context[ans['s']:ans['e']].strip()
new_dataset['answers'].append({"text": [answer_text], 'answer_start': [ans['s']]})
else:
new_dataset['answers'].append({"text": [], 'answer_start': []})
# Create a new arrow dataset to replace raw_datasets.
new_datasets[split] = Dataset.from_dict(new_dataset)
raw_datasets = DatasetDict(new_datasets)
# Preprocessing the datasets.
# Preprocessing is slighlty different for training and evaluation.
if training_args.do_train:
column_names = raw_datasets["train"].column_names
elif training_args.do_eval:
column_names = raw_datasets["validation"].column_names
else:
column_names = raw_datasets["test"].column_names
question_column_name = "question" if "question" in column_names else column_names[0]
context_column_name = "context" if "context" in column_names else column_names[1]
answer_column_name = "answers" if "answers" in column_names else column_names[2]
# Padding side determines if we do (question|context) or (context|question).
pad_on_right = tokenizer.padding_side == "right"
if data_args.max_seq_length > tokenizer.model_max_length:
logger.warning(
f"The max_seq_length passed ({data_args.max_seq_length}) is larger than the maximum length for the"
f"model ({tokenizer.model_max_length}). Using max_seq_length={tokenizer.model_max_length}."
)
max_seq_length = min(data_args.max_seq_length, tokenizer.model_max_length)
if data_args.question_only:
for split_name in ["train", "validation"]:
dataset = raw_datasets[split_name]
titles = dataset["title"]
answers = dataset["answers"]
contexts = dataset["context"]
questions = dataset["question"]
np.random.shuffle(contexts)
c = list(zip(titles, contexts))
np.random.shuffle(c)
titles, contexts = zip(*c)
new_dataset = {'id': [], 'context':[], 'question':[], 'answers': [], "title": []}
for i, (title, question, ans, context) in tqdm.tqdm(enumerate(zip(titles, questions, answers, contexts))):
if not len(ans['text']):
new_dataset['context'].append(context)
else:
ans_words = ans['text'][0].split()
context_words = context.split()
if len(context_words)-len(ans_words) <= 0:
new_context = ans_words
random_location = 0
else:
random_location = np.random.randint(len(context_words)-len(ans_words))
new_context = context_words[:random_location] + ans_words + context_words[random_location + len(ans_words):]
new_context = " ".join(new_context)
new_start = new_context.find(ans["text"][0])
ans["answer_start"] = [new_start]
new_dataset['context'].append(new_context)
new_dataset['id'].append(dataset[i]["id"])
new_dataset['question'].append(question)
new_dataset['title'].append(title)
if 'story_id' in dataset[i]:
if 'story_id' not in new_dataset:
new_dataset['story_id'] = []
new_dataset['story_id'].append(dataset[i]["story_id"])
new_dataset['answers'].append(ans)
raw_datasets[split_name] = Dataset.from_dict(new_dataset)
if data_args.passage_only:
for split_name in ["train", "validation"]:
dataset = raw_datasets[split_name]
titles = dataset["title"]
answers = dataset["answers"]
contexts = dataset["context"]
questions = dataset["question"]
new_dataset = {'id': [], 'context':[], 'question':[], 'answers': [], "title": []}
for i, (title, question, ans, context) in tqdm.tqdm(enumerate(zip(titles, questions, answers, contexts))):
new_dataset['context'].append(context)
new_dataset['id'].append(dataset[i]["id"])
new_dataset['question'].append("")
new_dataset['title'].append(title)
if 'story_id' in dataset[i]:
if 'story_id' not in new_dataset:
new_dataset['story_id'] = []
new_dataset['story_id'].append(dataset[i]["story_id"])
new_dataset['answers'].append(ans)
raw_datasets[split_name] = Dataset.from_dict(new_dataset)
# Training preprocessing
def prepare_train_features(examples):
# Some of the questions have lots of whitespace on the left, which is not useful and will make the
# truncation of the context fail (the tokenized question will take a lots of space). So we remove that
# left whitespace
examples[question_column_name] = [q.lstrip() for q in examples[question_column_name]]
# Tokenize our examples with truncation and maybe padding, but keep the overflows using a stride. This results
# in one example possible giving several features when a context is long, each of those features having a
# context that overlaps a bit the context of the previous feature.
tokenized_examples = tokenizer(
examples[question_column_name if pad_on_right else context_column_name],
examples[context_column_name if pad_on_right else question_column_name],
truncation="only_second" if pad_on_right else "only_first",
max_length=max_seq_length,
stride=data_args.doc_stride,
return_overflowing_tokens=True,
return_offsets_mapping=True,
return_special_tokens_mask=True,
return_token_type_ids=True,
padding="max_length",
)
# Since one example might give us several features if it has a long context, we need a map from a feature to
# its corresponding example. This key gives us just that.
sample_mapping = tokenized_examples.pop("overflow_to_sample_mapping")
# The offset mappings will give us a map from token to character position in the original context. This will
# help us compute the start_positions and end_positions.
offset_mapping = tokenized_examples.pop("offset_mapping")
# The special tokens will help us build the p_mask (which indicates the tokens that can't be in answers).
special_tokens = tokenized_examples.pop("special_tokens_mask")
# Let's label those examples!
tokenized_examples["start_positions"] = []
tokenized_examples["end_positions"] = []
tokenized_examples["is_impossible"] = []
tokenized_examples["cls_index"] = []
tokenized_examples["p_mask"] = []
for i, offsets in enumerate(offset_mapping):
# We will label impossible answers with the index of the CLS token.
input_ids = tokenized_examples["input_ids"][i]
cls_index = input_ids.index(tokenizer.cls_token_id)
tokenized_examples["cls_index"].append(cls_index)
# Grab the sequence corresponding to that example (to know what is the context and what is the question).
sequence_ids = copy.deepcopy(tokenized_examples["token_type_ids"][i])
for k, s in enumerate(special_tokens[i]):
if s:
sequence_ids[k] = 3
tokenizer_name = tokenizer.name_or_path
if "roberta" in tokenizer_name:
context_idx = 0
else:
context_idx = 1 if pad_on_right else 0
# Build the p_mask: non special tokens and context gets 0.0, the others get 1.0.
# The cls token gets 1.0 too (for predictions of empty answers).
# Roberta (token type Id is not provided, so the question tokens are also valid tokens for start and end)
# BERT (token type Id is provided so question is masked out)
# DeBERTa (token type Id is provided so question is masked out)
tokenized_examples["p_mask"].append(
[
0.0 if (not special_tokens[i][k] and s == context_idx) or k == cls_index else 1.0
for k, s in enumerate(sequence_ids)
]
)
# One example can give several spans, this is the index of the example containing this span of text.
sample_index = sample_mapping[i]
answers = examples[answer_column_name][sample_index]
# If no answers are given, set the cls_index as answer.
if len(answers["answer_start"]) == 0:
tokenized_examples["start_positions"].append(cls_index)
tokenized_examples["end_positions"].append(cls_index)
tokenized_examples["is_impossible"].append(1.0)
else:
# Start/end character index of the answer in the text.
start_char = answers["answer_start"][0]
end_char = start_char + len(answers["text"][0])
# Start token index of the current span in the text.
token_start_index = 0
while sequence_ids[token_start_index] != context_idx:
token_start_index += 1
# End token index of the current span in the text.
token_end_index = len(input_ids) - 1
while sequence_ids[token_end_index] != context_idx:
token_end_index -= 1
# Detect if the answer is out of the span (in which case this feature is labeled with the CLS index).
if not (offsets[token_start_index][0] <= start_char and offsets[token_end_index][1] >= end_char):
tokenized_examples["start_positions"].append(cls_index)
tokenized_examples["end_positions"].append(cls_index)
tokenized_examples["is_impossible"].append(1.0)
else:
# Otherwise move the token_start_index and token_end_index to the two ends of the answer.
# Note: we could go after the last offset if the answer is the last word (edge case).
while token_start_index < len(offsets) and offsets[token_start_index][0] <= start_char:
token_start_index += 1
tokenized_examples["start_positions"].append(token_start_index - 1)
while offsets[token_end_index][1] >= end_char:
token_end_index -= 1
tokenized_examples["end_positions"].append(token_end_index + 1)
tokenized_examples["is_impossible"].append(0.0)
return tokenized_examples
if training_args.do_train:
if "train" not in raw_datasets:
raise ValueError("--do_train requires a train dataset")
train_dataset = raw_datasets["train"]
if data_args.max_train_samples is not None:
# Select samples from Dataset, This will help to decrease processing time
train_dataset = train_dataset.select(range(data_args.max_train_samples))
# Create Training Features
with training_args.main_process_first(desc="train dataset map pre-processing"):
train_dataset = train_dataset.map(
prepare_train_features,
batched=True,
num_proc=data_args.preprocessing_num_workers,
remove_columns=column_names,
load_from_cache_file=not data_args.overwrite_cache,
desc="Running tokenizer on train dataset",
)
if data_args.max_train_samples is not None:
# Select samples from dataset again since Feature Creation might increase number of features
train_dataset = train_dataset.select(range(data_args.max_train_samples))
# Validation preprocessing
def prepare_validation_features(examples):
# Tokenize our examples with truncation and maybe padding, but keep the overflows using a stride. This results
# in one example possible giving several features when a context is long, each of those features having a
# context that overlaps a bit the context of the previous feature.
tokenized_examples = tokenizer(
examples[question_column_name if pad_on_right else context_column_name],
examples[context_column_name if pad_on_right else question_column_name],
truncation="only_second" if pad_on_right else "only_first",
max_length=max_seq_length,
stride=data_args.doc_stride,
return_overflowing_tokens=True,
return_offsets_mapping=True,
return_special_tokens_mask=True,
return_token_type_ids=True,
padding="max_length",
)
# Since one example might give us several features if it has a long context, we need a map from a feature to
# its corresponding example. This key gives us just that.
sample_mapping = tokenized_examples.pop("overflow_to_sample_mapping")
# The special tokens will help us build the p_mask (which indicates the tokens that can't be in answers).
special_tokens = tokenized_examples.pop("special_tokens_mask")
# For evaluation, we will need to convert our predictions to substrings of the context, so we keep the
# corresponding example_id and we will store the offset mappings.
tokenized_examples["example_id"] = []
# We still provide the index of the CLS token and the p_mask to the model, but not the is_impossible label.
tokenized_examples["cls_index"] = []
tokenized_examples["p_mask"] = []
for i, input_ids in enumerate(tokenized_examples["input_ids"]):
# Find the CLS token in the input ids.
cls_index = input_ids.index(tokenizer.cls_token_id)
tokenized_examples["cls_index"].append(cls_index)
# Grab the sequence corresponding to that example (to know what is the context and what is the question).
sequence_ids = copy.deepcopy(tokenized_examples["token_type_ids"][i])
for k, s in enumerate(special_tokens[i]):
if s:
sequence_ids[k] = 3
tokenizer_name = tokenizer.name_or_path
if "roberta" in tokenizer_name:
context_idx = 0
else:
context_idx = 1 if pad_on_right else 0
# Build the p_mask: non special tokens and context gets 0.0, the others 1.0.
tokenized_examples["p_mask"].append(
[
0.0 if (not special_tokens[i][k] and s == context_idx) or k == cls_index else 1.0
for k, s in enumerate(sequence_ids)
]
)
# One example can give several spans, this is the index of the example containing this span of text.
sample_index = sample_mapping[i]
tokenized_examples["example_id"].append(examples["id"][sample_index])
# Set to None the offset_mapping that are not part of the context so it's easy to determine if a token
# position is part of the context or not.
tokenized_examples["offset_mapping"][i] = [
(o if sequence_ids[k] == context_idx else None)
for k, o in enumerate(tokenized_examples["offset_mapping"][i])
]
return tokenized_examples
# Previous question
def prev_questions(eval_dataset):
all_questions = [ex["question"] for ex in eval_dataset]
all_titles = [ex["title"] for ex in eval_dataset]
new_questions = []
new_answers = []
for i, q in enumerate(range(1, len(all_questions))):
new_questions.append(all_questions[i-1])
new_answers.append({'text': [], 'answer_start': []})
new_questions.append(all_questions[0])
new_answers.append({'text': [], 'answer_start': []})
eval_dataset = eval_dataset.remove_columns(["question"])
eval_dataset = eval_dataset.add_column("question", new_questions)
eval_dataset = eval_dataset.remove_columns(["answers"])
eval_dataset = eval_dataset.add_column("answers", new_answers)
return eval_dataset
# no Question
def no_questions(eval_dataset):
# Replace question with title
all_questions = [ex["question"] for ex in eval_dataset]
all_titles = [ex["title"] for ex in eval_dataset]
new_questions = []
new_answers = []
new_dataset = {'id': [], 'context':[], 'question':[], 'answers': [], "title": []}
for i, q in enumerate(range(len(all_questions))):
ex = eval_dataset[i]
answer_text = ex["answers"]["text"][0] if len(ex["answers"]["text"]) else ""
if answer_text != "":
new_dataset['context'].append(eval_dataset[i]["context"])
new_dataset['id'].append(eval_dataset[i]["id"])
new_dataset['question'].append(all_titles[i])
new_dataset['title'].append(eval_dataset[i]["title"])
if 'story_id' in eval_dataset[i]:
if 'story_id' not in new_dataset:
new_dataset['story_id'] = []
new_dataset['story_id'].append(eval_dataset[i]["story_id"])
new_dataset['answers'].append({'text': [], 'answer_start': []})
eval_dataset = Dataset.from_dict(new_dataset)
return eval_dataset
def same_para_questions(eval_dataset, seed=1234):
all_questions = [ex["question"] for ex in eval_dataset]
all_answer_texts = [ex["answers"]["text"][0] if len(ex["answers"]["text"]) else "" for ex in eval_dataset]
if "story_id" in eval_dataset[0]:
all_titles = [ex["story_id"] for ex in eval_dataset]
else:
all_titles = [ex["title"] for ex in eval_dataset]
all_ids = [ex["id"] for ex in eval_dataset]
id_dict = {ex["id"]:ex for ex in eval_dataset}
new_questions = []
new_answers = []
title_question_dict = {}
title_dict = {}
random.seed(seed)
new_dataset = {'id': [], 'context':[], 'question':[], 'answers': [], "title": []}
for i in range(0, len(all_titles)):
t = all_titles[i]
if t in title_dict:
title_dict[t].append(all_ids[i])
else:
title_dict[t] = [all_ids[i]]
for title in title_dict:
ids = title_dict[title]
shuffled = sorted(ids, key=lambda k: random.random())
for id_, new_id in zip(ids, shuffled):
ex = id_dict[id_]
new_ex = id_dict[new_id]
answer_text = ex["answers"]["text"][0] if len(ex["answers"]["text"]) else ""
if answer_text != "":
# This is the subset that needs to be flipped to no answer
new_dataset['context'].append(ex["context"])
new_dataset['id'].append(ex["id"])
new_dataset['question'].append(new_ex["question"])
new_dataset['title'].append(ex["title"])
if 'story_id' in eval_dataset[i]:
if 'story_id' not in new_dataset:
new_dataset['story_id'] = []
new_dataset['story_id'].append(ex["story_id"])
if ex["answers"]['text'] != new_ex["answers"]['text']:
new_dataset['answers'].append({'text': [], 'answer_start': []})
else:
new_dataset['answers'].append(ex["answers"])
# swap questions with different contexts.
# context_dict = {}
# for id_ in title_dict[title]:
# ex = id_dict[id_]
# if ex["context"] in context_dict:
# context_dict[ex["context"]].append(ex)
# else:
# context_dict[ex["context"]] = [ex]
# if len(title_dict[title]) > 1 and len(context_dict) > 1:
# pdb.set_trace()
eval_dataset = Dataset.from_dict(new_dataset)
return eval_dataset
# Random question with a different title
def random_questions(eval_dataset, seed=1234):
all_questions = [ex["question"] for ex in eval_dataset]
all_answer_texts = [ex["answers"]["text"][0] if len(ex["answers"]["text"]) else "" for ex in eval_dataset]
if "story_id" in eval_dataset[0]:
all_titles = [ex["story_id"] for ex in eval_dataset]
else:
all_titles = [ex["title"] for ex in eval_dataset]
new_questions = []
new_answers = []
np.random.seed(seed)
new_dataset = {'id': [], 'context':[], 'question':[], 'answers': [], "title": []}
for i, q in enumerate(range(0, len(all_questions))):
answer_text = all_answer_texts[i]
while(1):
rand_idx = np.random.randint(len(all_questions))
if all_titles[rand_idx] != all_titles[i]:
new_question = all_questions[rand_idx]
break
if answer_text != "":
# This is the subset that needs to be flipped to no answer
# new_answers.append({'text': [], 'answer_start': []})
# new_questions.append(new_question)
new_dataset['context'].append(eval_dataset[i]["context"])
new_dataset['id'].append(eval_dataset[i]["id"])
new_dataset['question'].append(new_question)
new_dataset['title'].append(eval_dataset[i]["title"])
if 'story_id' in eval_dataset[i]:
if 'story_id' not in new_dataset:
new_dataset['story_id'] = []
new_dataset['story_id'].append(eval_dataset[i]["story_id"])
new_dataset['answers'].append({'text': [], 'answer_start': []})
# eval_dataset = eval_dataset.remove_columns(["question"])
# eval_dataset = eval_dataset.add_column("question", new_questions)
# eval_dataset = eval_dataset.remove_columns(["answers"])
# eval_dataset = eval_dataset.add_column("answers", new_answers)
eval_dataset = Dataset.from_dict(new_dataset)
return eval_dataset
def question_same_title(eval_dataset):
all_questions = [ex["question"] for ex in eval_dataset]
all_titles = [ex["title"] for ex in eval_dataset]
all_contexts = [ex["title"] for ex in eval_dataset]
new_questions = []
new_answers = []
# SQUAD : Same title but different paragraph
eval_dataset = eval_dataset.remove_columns(["question"])
eval_dataset = eval_dataset.add_column("question", new_questions)
eval_dataset = eval_dataset.remove_columns(["answers"])
eval_dataset = eval_dataset.add_column("answers", new_answers)
return eval_dataset
if training_args.do_eval:
if "validation" not in raw_datasets:
raise ValueError("--do_eval requires a validation dataset")
eval_examples = raw_datasets["validation"]
if data_args.max_eval_samples is not None:
# Selecting Eval Samples from Dataset
eval_examples = eval_examples.select(range(data_args.max_eval_samples))
# Partial-input perturbation
if data_args.partial_inputs == "no":
eval_examples = no_questions(eval_examples)
elif data_args.partial_inputs == "previous":
eval_examples = prev_questions(eval_examples)
elif data_args.partial_inputs == "random":
eval_examples = random_questions(eval_examples, data_args.partial_inputs_seed)
elif data_args.partial_inputs == "same_title":
eval_examples = same_para_questions(eval_examples, data_args.partial_inputs_seed)
# eval_examples = no_questions(eval_examples)
# Create Features from Eval Dataset
with training_args.main_process_first(desc="validation dataset map pre-processing"):
eval_dataset = eval_examples.map(
prepare_validation_features,
batched=True,
num_proc=data_args.preprocessing_num_workers,
remove_columns=column_names,
load_from_cache_file=not data_args.overwrite_cache,
desc="Running tokenizer on validation dataset",
)
if data_args.max_eval_samples is not None:
# Selecting Samples from Dataset again since Feature Creation might increase samples size
eval_dataset = eval_dataset.select(range(data_args.max_eval_samples))
if training_args.do_predict:
if "test" not in raw_datasets:
raise ValueError("--do_predict requires a test dataset")
predict_examples = raw_datasets["test"]
if data_args.max_predict_samples is not None:
# We will select sample from whole data
predict_examples = predict_examples.select(range(data_args.max_predict_samples))
# Test Feature Creation
with training_args.main_process_first(desc="prediction dataset map pre-processing"):
predict_dataset = predict_examples.map(
prepare_validation_features,
batched=True,
num_proc=data_args.preprocessing_num_workers,
remove_columns=column_names,
load_from_cache_file=not data_args.overwrite_cache,
desc="Running tokenizer on prediction dataset",
)
if data_args.max_predict_samples is not None:
# During Feature creation dataset samples might increase, we will select required samples again
predict_dataset = predict_dataset.select(range(data_args.max_predict_samples))
# Data collator
# We have already padded to max length if the corresponding flag is True, otherwise we need to pad in the data
# collator.
data_collator = (
default_data_collator
if data_args.pad_to_max_length
else DataCollatorWithPadding(tokenizer, pad_to_multiple_of=8 if training_args.fp16 else None)
)
# Post-processing:
def post_processing_function(examples, features, predictions, stage="eval"):
# Post-processing: we match the start logits and end logits to answers in the original context.
predictions, scores_diff_json = postprocess_qa_predictions_with_beam_search(
examples=examples,
features=features,
predictions=predictions,
version_2_with_negative=data_args.version_2_with_negative,
n_best_size=data_args.n_best_size,
max_answer_length=data_args.max_answer_length,
start_n_top=5, # model.config.start_n_top,
end_n_top=5, # model.config.end_n_top,
output_dir=training_args.output_dir,
log_level=log_level,
prefix=stage,
)
# Format the result to the format the metric expects.
if data_args.version_2_with_negative:
formatted_predictions = [
{"id": k, "prediction_text": v, "no_answer_probability": scores_diff_json[k]}
for k, v in predictions.items()
]
else:
formatted_predictions = [{"id": k, "prediction_text": v} for k, v in predictions.items()]
references = [{"id": ex["id"], "answers": ex[answer_column_name]} for ex in examples]
return EvalPrediction(predictions=formatted_predictions, label_ids=references)
metric = load_metric("squad_v2" if data_args.version_2_with_negative else "squad")
def compute_metrics(p: EvalPrediction):
return metric.compute(predictions=p.predictions, references=p.label_ids, no_answer_threshold=data_args.no_answer_threshold)
# Initialize our Trainer
trainer = QuestionAnsweringTrainer(
model=model,
args=training_args,
train_dataset=train_dataset if training_args.do_train else None,
eval_dataset=eval_dataset if training_args.do_eval else None,
eval_examples=eval_examples if training_args.do_eval else None,
tokenizer=tokenizer,
data_collator=data_collator,
post_process_function=post_processing_function,
compute_metrics=compute_metrics,
)
# Training
if training_args.do_train:
checkpoint = None
if training_args.resume_from_checkpoint is not None:
checkpoint = training_args.resume_from_checkpoint
elif last_checkpoint is not None:
checkpoint = last_checkpoint
train_result = trainer.train(resume_from_checkpoint=checkpoint)
trainer.save_model() # Saves the tokenizer too for easy upload
metrics = train_result.metrics
max_train_samples = (
data_args.max_train_samples if data_args.max_train_samples is not None else len(train_dataset)
)
metrics["train_samples"] = min(max_train_samples, len(train_dataset))
trainer.log_metrics("train", metrics)
trainer.save_metrics("train", metrics)
trainer.save_state()
# Evaluation
if training_args.do_eval:
logger.info("*** Evaluate ***")
metrics = trainer.evaluate()
max_eval_samples = data_args.max_eval_samples if data_args.max_eval_samples is not None else len(eval_dataset)
metrics["eval_samples"] = min(max_eval_samples, len(eval_dataset))
trainer.log_metrics("eval", metrics)
trainer.save_metrics("eval", metrics)
# Prediction
if training_args.do_predict:
logger.info("*** Predict ***")
results = trainer.predict(predict_dataset, predict_examples)
metrics = results.metrics
max_predict_samples = (
data_args.max_predict_samples if data_args.max_predict_samples is not None else len(predict_dataset)
)
metrics["predict_samples"] = min(max_predict_samples, len(predict_dataset))
trainer.log_metrics("predict", metrics)
trainer.save_metrics("predict", metrics)
kwargs = {"finetuned_from": model_args.model_name_or_path, "tasks": "question-answering"}
if data_args.dataset_name is not None:
kwargs["dataset_tags"] = data_args.dataset_name
if data_args.dataset_config_name is not None:
kwargs["dataset_args"] = data_args.dataset_config_name
kwargs["dataset"] = f"{data_args.dataset_name} {data_args.dataset_config_name}"
else:
kwargs["dataset"] = data_args.dataset_name
if training_args.push_to_hub:
trainer.push_to_hub(**kwargs)
else:
trainer.create_model_card(**kwargs)
def _mp_fn(index):
# For xla_spawn (TPUs)
main()
if __name__ == "__main__":
main()
| 50,808 | 47.435653 | 774 | py |
robust-transformers | robust-transformers-main/examples/pytorch/question-answering/run_qa_no_trainer.py | #!/usr/bin/env python
# coding=utf-8
# Copyright 2021 The HuggingFace Inc. team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
"""
Fine-tuning a 🤗 Transformers model for question answering using 🤗 Accelerate.
"""
# You can also adapt this script on your own question answering task. Pointers for this are left as comments.
import argparse
import logging
import math
import os
import random
from pathlib import Path
import datasets
import numpy as np
import torch
from datasets import load_dataset, load_metric
from torch.utils.data import DataLoader
from tqdm.auto import tqdm
import transformers
from accelerate import Accelerator
from huggingface_hub import Repository
from transformers import (
CONFIG_MAPPING,
MODEL_MAPPING,
AdamW,
AutoConfig,
AutoModelForQuestionAnswering,
AutoTokenizer,
DataCollatorWithPadding,
EvalPrediction,
SchedulerType,
default_data_collator,
get_scheduler,
set_seed,
)
from transformers.file_utils import get_full_repo_name
from transformers.utils import check_min_version
from transformers.utils.versions import require_version
from utils_qa import postprocess_qa_predictions
# Will error if the minimal version of Transformers is not installed. Remove at your own risks.
check_min_version("4.18.0.dev0")
require_version("datasets>=1.8.0", "To fix: pip install -r examples/pytorch/question-answering/requirements.txt")
logger = logging.getLogger(__name__)
# You should update this to your particular problem to have better documentation of `model_type`
MODEL_CONFIG_CLASSES = list(MODEL_MAPPING.keys())
MODEL_TYPES = tuple(conf.model_type for conf in MODEL_CONFIG_CLASSES)
def parse_args():
parser = argparse.ArgumentParser(description="Finetune a transformers model on a Question Answering task")
parser.add_argument(
"--dataset_name",
type=str,
default=None,
help="The name of the dataset to use (via the datasets library).",
)
parser.add_argument(
"--dataset_config_name",
type=str,
default=None,
help="The configuration name of the dataset to use (via the datasets library).",
)
parser.add_argument(
"--train_file", type=str, default=None, help="A csv or a json file containing the training data."
)
parser.add_argument(
"--preprocessing_num_workers", type=int, default=4, help="A csv or a json file containing the training data."
)
parser.add_argument("--do_predict", action="store_true", help="To do prediction on the question answering model")
parser.add_argument(
"--validation_file", type=str, default=None, help="A csv or a json file containing the validation data."
)
parser.add_argument(
"--test_file", type=str, default=None, help="A csv or a json file containing the Prediction data."
)
parser.add_argument(
"--max_seq_length",
type=int,
default=384,
help="The maximum total input sequence length after tokenization. Sequences longer than this will be truncated,"
" sequences shorter will be padded if `--pad_to_max_lengh` is passed.",
)
parser.add_argument(
"--pad_to_max_length",
action="store_true",
help="If passed, pad all samples to `max_seq_length`. Otherwise, dynamic padding is used.",
)
parser.add_argument(
"--model_name_or_path",
type=str,
help="Path to pretrained model or model identifier from huggingface.co/models.",
required=True,
)
parser.add_argument(
"--config_name",
type=str,
default=None,
help="Pretrained config name or path if not the same as model_name",
)
parser.add_argument(
"--tokenizer_name",
type=str,
default=None,
help="Pretrained tokenizer name or path if not the same as model_name",
)
parser.add_argument(
"--use_slow_tokenizer",
action="store_true",
help="If passed, will use a slow tokenizer (not backed by the 🤗 Tokenizers library).",
)
parser.add_argument(
"--per_device_train_batch_size",
type=int,
default=8,
help="Batch size (per device) for the training dataloader.",
)
parser.add_argument(
"--per_device_eval_batch_size",
type=int,
default=8,
help="Batch size (per device) for the evaluation dataloader.",
)
parser.add_argument(
"--learning_rate",
type=float,
default=5e-5,
help="Initial learning rate (after the potential warmup period) to use.",
)
parser.add_argument("--weight_decay", type=float, default=0.0, help="Weight decay to use.")
parser.add_argument("--num_train_epochs", type=int, default=3, help="Total number of training epochs to perform.")
parser.add_argument(
"--max_train_steps",
type=int,
default=None,
help="Total number of training steps to perform. If provided, overrides num_train_epochs.",
)
parser.add_argument(
"--gradient_accumulation_steps",
type=int,
default=1,
help="Number of updates steps to accumulate before performing a backward/update pass.",
)
parser.add_argument(
"--lr_scheduler_type",
type=SchedulerType,
default="linear",
help="The scheduler type to use.",
choices=["linear", "cosine", "cosine_with_restarts", "polynomial", "constant", "constant_with_warmup"],
)
parser.add_argument(
"--num_warmup_steps", type=int, default=0, help="Number of steps for the warmup in the lr scheduler."
)
parser.add_argument("--output_dir", type=str, default=None, help="Where to store the final model.")
parser.add_argument("--seed", type=int, default=None, help="A seed for reproducible training.")
parser.add_argument(
"--doc_stride",
type=int,
default=128,
help="When splitting up a long document into chunks how much stride to take between chunks.",
)
parser.add_argument(
"--n_best_size",
type=int,
default=20,
help="The total number of n-best predictions to generate when looking for an answer.",
)
parser.add_argument(
"--null_score_diff_threshold",
type=float,
default=0.0,
help="The threshold used to select the null answer: if the best answer has a score that is less than "
"the score of the null answer minus this threshold, the null answer is selected for this example. "
"Only useful when `version_2_with_negative=True`.",
)
parser.add_argument(
"--version_2_with_negative",
type=bool,
default=False,
help="If true, some of the examples do not have an answer.",
)
parser.add_argument(
"--max_answer_length",
type=int,
default=30,
help="The maximum length of an answer that can be generated. This is needed because the start "
"and end predictions are not conditioned on one another.",
)
parser.add_argument(
"--max_train_samples",
type=int,
default=None,
help="For debugging purposes or quicker training, truncate the number of training examples to this "
"value if set.",
)
parser.add_argument(
"--max_eval_samples",
type=int,
default=None,
help="For debugging purposes or quicker training, truncate the number of evaluation examples to this "
"value if set.",
)
parser.add_argument(
"--overwrite_cache", type=bool, default=False, help="Overwrite the cached training and evaluation sets"
)
parser.add_argument(
"--max_predict_samples",
type=int,
default=None,
help="For debugging purposes or quicker training, truncate the number of prediction examples to this",
)
parser.add_argument(
"--model_type",
type=str,
default=None,
help="Model type to use if training from scratch.",
choices=MODEL_TYPES,
)
parser.add_argument("--push_to_hub", action="store_true", help="Whether or not to push the model to the Hub.")
parser.add_argument(
"--hub_model_id", type=str, help="The name of the repository to keep in sync with the local `output_dir`."
)
parser.add_argument("--hub_token", type=str, help="The token to use to push to the Model Hub.")
args = parser.parse_args()
# Sanity checks
if (
args.dataset_name is None
and args.train_file is None
and args.validation_file is None
and args.test_file is None
):
raise ValueError("Need either a dataset name or a training/validation/test file.")
else:
if args.train_file is not None:
extension = args.train_file.split(".")[-1]
assert extension in ["csv", "json"], "`train_file` should be a csv or a json file."
if args.validation_file is not None:
extension = args.validation_file.split(".")[-1]
assert extension in ["csv", "json"], "`validation_file` should be a csv or a json file."
if args.test_file is not None:
extension = args.test_file.split(".")[-1]
assert extension in ["csv", "json"], "`test_file` should be a csv or a json file."
if args.push_to_hub:
assert args.output_dir is not None, "Need an `output_dir` to create a repo when `--push_to_hub` is passed."
return args
def main():
args = parse_args()
# Initialize the accelerator. We will let the accelerator handle device placement for us in this example.
accelerator = Accelerator()
# Make one log on every process with the configuration for debugging.
logging.basicConfig(
format="%(asctime)s - %(levelname)s - %(name)s - %(message)s",
datefmt="%m/%d/%Y %H:%M:%S",
level=logging.INFO,
)
logger.info(accelerator.state)
# Setup logging, we only want one process per machine to log things on the screen.
# accelerator.is_local_main_process is only True for one process per machine.
logger.setLevel(logging.INFO if accelerator.is_local_main_process else logging.ERROR)
if accelerator.is_local_main_process:
datasets.utils.logging.set_verbosity_warning()
transformers.utils.logging.set_verbosity_info()
else:
datasets.utils.logging.set_verbosity_error()
transformers.utils.logging.set_verbosity_error()
# If passed along, set the training seed now.
if args.seed is not None:
set_seed(args.seed)
# Handle the repository creation
if accelerator.is_main_process:
if args.push_to_hub:
if args.hub_model_id is None:
repo_name = get_full_repo_name(Path(args.output_dir).name, token=args.hub_token)
else:
repo_name = args.hub_model_id
repo = Repository(args.output_dir, clone_from=repo_name)
elif args.output_dir is not None:
os.makedirs(args.output_dir, exist_ok=True)
accelerator.wait_for_everyone()
# Get the datasets: you can either provide your own CSV/JSON/TXT training and evaluation files (see below)
# or just provide the name of one of the public datasets available on the hub at https://huggingface.co/datasets/
# (the dataset will be downloaded automatically from the datasets Hub).
#
# For CSV/JSON files, this script will use the column called 'text' or the first column if no column called
# 'text' is found. You can easily tweak this behavior (see below).
#
# In distributed training, the load_dataset function guarantee that only one local process can concurrently
# download the dataset.
if args.dataset_name is not None:
# Downloading and loading a dataset from the hub.
raw_datasets = load_dataset(args.dataset_name, args.dataset_config_name)
else:
data_files = {}
if args.train_file is not None:
data_files["train"] = args.train_file
if args.validation_file is not None:
data_files["validation"] = args.validation_file
if args.test_file is not None:
data_files["test"] = args.test_file
extension = args.train_file.split(".")[-1]
raw_datasets = load_dataset(extension, data_files=data_files, field="data")
# See more about loading any type of standard or custom dataset (from files, python dict, pandas DataFrame, etc) at
# https://huggingface.co/docs/datasets/loading_datasets.html.
# Load pretrained model and tokenizer
#
# In distributed training, the .from_pretrained methods guarantee that only one local process can concurrently
# download model & vocab.
if args.config_name:
config = AutoConfig.from_pretrained(args.config_name)
elif args.model_name_or_path:
config = AutoConfig.from_pretrained(args.model_name_or_path)
else:
config = CONFIG_MAPPING[args.model_type]()
logger.warning("You are instantiating a new config instance from scratch.")
if args.tokenizer_name:
tokenizer = AutoTokenizer.from_pretrained(args.tokenizer_name, use_fast=True)
elif args.model_name_or_path:
tokenizer = AutoTokenizer.from_pretrained(args.model_name_or_path, use_fast=True)
else:
raise ValueError(
"You are instantiating a new tokenizer from scratch. This is not supported by this script."
"You can do it from another script, save it, and load it from here, using --tokenizer_name."
)
if args.model_name_or_path:
model = AutoModelForQuestionAnswering.from_pretrained(
args.model_name_or_path,
from_tf=bool(".ckpt" in args.model_name_or_path),
config=config,
)
else:
logger.info("Training new model from scratch")
model = AutoModelForQuestionAnswering.from_config(config)
# Preprocessing the datasets.
# Preprocessing is slighlty different for training and evaluation.
column_names = raw_datasets["train"].column_names
question_column_name = "question" if "question" in column_names else column_names[0]
context_column_name = "context" if "context" in column_names else column_names[1]
answer_column_name = "answers" if "answers" in column_names else column_names[2]
# Padding side determines if we do (question|context) or (context|question).
pad_on_right = tokenizer.padding_side == "right"
if args.max_seq_length > tokenizer.model_max_length:
logger.warning(
f"The max_seq_length passed ({args.max_seq_length}) is larger than the maximum length for the"
f"model ({tokenizer.model_max_length}). Using max_seq_length={tokenizer.model_max_length}."
)
max_seq_length = min(args.max_seq_length, tokenizer.model_max_length)
# Training preprocessing
def prepare_train_features(examples):
# Some of the questions have lots of whitespace on the left, which is not useful and will make the
# truncation of the context fail (the tokenized question will take a lots of space). So we remove that
# left whitespace
examples[question_column_name] = [q.lstrip() for q in examples[question_column_name]]
# Tokenize our examples with truncation and maybe padding, but keep the overflows using a stride. This results
# in one example possible giving several features when a context is long, each of those features having a
# context that overlaps a bit the context of the previous feature.
tokenized_examples = tokenizer(
examples[question_column_name if pad_on_right else context_column_name],
examples[context_column_name if pad_on_right else question_column_name],
truncation="only_second" if pad_on_right else "only_first",
max_length=max_seq_length,
stride=args.doc_stride,
return_overflowing_tokens=True,
return_offsets_mapping=True,
padding="max_length" if args.pad_to_max_length else False,
)
# Since one example might give us several features if it has a long context, we need a map from a feature to
# its corresponding example. This key gives us just that.
sample_mapping = tokenized_examples.pop("overflow_to_sample_mapping")
# The offset mappings will give us a map from token to character position in the original context. This will
# help us compute the start_positions and end_positions.
offset_mapping = tokenized_examples.pop("offset_mapping")
# Let's label those examples!
tokenized_examples["start_positions"] = []
tokenized_examples["end_positions"] = []
for i, offsets in enumerate(offset_mapping):
# We will label impossible answers with the index of the CLS token.
input_ids = tokenized_examples["input_ids"][i]
cls_index = input_ids.index(tokenizer.cls_token_id)
# Grab the sequence corresponding to that example (to know what is the context and what is the question).
sequence_ids = tokenized_examples.sequence_ids(i)
# One example can give several spans, this is the index of the example containing this span of text.
sample_index = sample_mapping[i]
answers = examples[answer_column_name][sample_index]
# If no answers are given, set the cls_index as answer.
if len(answers["answer_start"]) == 0:
tokenized_examples["start_positions"].append(cls_index)
tokenized_examples["end_positions"].append(cls_index)
else:
# Start/end character index of the answer in the text.
start_char = answers["answer_start"][0]
end_char = start_char + len(answers["text"][0])
# Start token index of the current span in the text.
token_start_index = 0
while sequence_ids[token_start_index] != (1 if pad_on_right else 0):
token_start_index += 1
# End token index of the current span in the text.
token_end_index = len(input_ids) - 1
while sequence_ids[token_end_index] != (1 if pad_on_right else 0):
token_end_index -= 1
# Detect if the answer is out of the span (in which case this feature is labeled with the CLS index).
if not (offsets[token_start_index][0] <= start_char and offsets[token_end_index][1] >= end_char):
tokenized_examples["start_positions"].append(cls_index)
tokenized_examples["end_positions"].append(cls_index)
else:
# Otherwise move the token_start_index and token_end_index to the two ends of the answer.
# Note: we could go after the last offset if the answer is the last word (edge case).
while token_start_index < len(offsets) and offsets[token_start_index][0] <= start_char:
token_start_index += 1
tokenized_examples["start_positions"].append(token_start_index - 1)
while offsets[token_end_index][1] >= end_char:
token_end_index -= 1
tokenized_examples["end_positions"].append(token_end_index + 1)
return tokenized_examples
if "train" not in raw_datasets:
raise ValueError("--do_train requires a train dataset")
train_dataset = raw_datasets["train"]
if args.max_train_samples is not None:
# We will select sample from whole data if agument is specified
train_dataset = train_dataset.select(range(args.max_train_samples))
# Create train feature from dataset
with accelerator.main_process_first():
train_dataset = train_dataset.map(
prepare_train_features,
batched=True,
num_proc=args.preprocessing_num_workers,
remove_columns=column_names,
load_from_cache_file=not args.overwrite_cache,
desc="Running tokenizer on train dataset",
)
if args.max_train_samples is not None:
# Number of samples might increase during Feature Creation, We select only specified max samples
train_dataset = train_dataset.select(range(args.max_train_samples))
# Validation preprocessing
def prepare_validation_features(examples):
# Some of the questions have lots of whitespace on the left, which is not useful and will make the
# truncation of the context fail (the tokenized question will take a lots of space). So we remove that
# left whitespace
examples[question_column_name] = [q.lstrip() for q in examples[question_column_name]]
# Tokenize our examples with truncation and maybe padding, but keep the overflows using a stride. This results
# in one example possible giving several features when a context is long, each of those features having a
# context that overlaps a bit the context of the previous feature.
tokenized_examples = tokenizer(
examples[question_column_name if pad_on_right else context_column_name],
examples[context_column_name if pad_on_right else question_column_name],
truncation="only_second" if pad_on_right else "only_first",
max_length=max_seq_length,
stride=args.doc_stride,
return_overflowing_tokens=True,
return_offsets_mapping=True,
padding="max_length" if args.pad_to_max_length else False,
)
# Since one example might give us several features if it has a long context, we need a map from a feature to
# its corresponding example. This key gives us just that.
sample_mapping = tokenized_examples.pop("overflow_to_sample_mapping")
# For evaluation, we will need to convert our predictions to substrings of the context, so we keep the
# corresponding example_id and we will store the offset mappings.
tokenized_examples["example_id"] = []
for i in range(len(tokenized_examples["input_ids"])):
# Grab the sequence corresponding to that example (to know what is the context and what is the question).
sequence_ids = tokenized_examples.sequence_ids(i)
context_index = 1 if pad_on_right else 0
# One example can give several spans, this is the index of the example containing this span of text.
sample_index = sample_mapping[i]
tokenized_examples["example_id"].append(examples["id"][sample_index])
# Set to None the offset_mapping that are not part of the context so it's easy to determine if a token
# position is part of the context or not.
tokenized_examples["offset_mapping"][i] = [
(o if sequence_ids[k] == context_index else None)
for k, o in enumerate(tokenized_examples["offset_mapping"][i])
]
return tokenized_examples
if "validation" not in raw_datasets:
raise ValueError("--do_eval requires a validation dataset")
eval_examples = raw_datasets["validation"]
if args.max_eval_samples is not None:
# We will select sample from whole data
eval_examples = eval_examples.select(range(args.max_eval_samples))
# Validation Feature Creation
with accelerator.main_process_first():
eval_dataset = eval_examples.map(
prepare_validation_features,
batched=True,
num_proc=args.preprocessing_num_workers,
remove_columns=column_names,
load_from_cache_file=not args.overwrite_cache,
desc="Running tokenizer on validation dataset",
)
if args.max_eval_samples is not None:
# During Feature creation dataset samples might increase, we will select required samples again
eval_dataset = eval_dataset.select(range(args.max_eval_samples))
if args.do_predict:
if "test" not in raw_datasets:
raise ValueError("--do_predict requires a test dataset")
predict_examples = raw_datasets["test"]
if args.max_predict_samples is not None:
# We will select sample from whole data
predict_examples = predict_examples.select(range(args.max_predict_samples))
# Predict Feature Creation
with accelerator.main_process_first():
predict_dataset = predict_examples.map(
prepare_validation_features,
batched=True,
num_proc=args.preprocessing_num_workers,
remove_columns=column_names,
load_from_cache_file=not args.overwrite_cache,
desc="Running tokenizer on prediction dataset",
)
if args.max_predict_samples is not None:
# During Feature creation dataset samples might increase, we will select required samples again
predict_dataset = predict_dataset.select(range(args.max_predict_samples))
# Log a few random samples from the training set:
for index in random.sample(range(len(train_dataset)), 3):
logger.info(f"Sample {index} of the training set: {train_dataset[index]}.")
# DataLoaders creation:
if args.pad_to_max_length:
# If padding was already done ot max length, we use the default data collator that will just convert everything
# to tensors.
data_collator = default_data_collator
else:
# Otherwise, `DataCollatorWithPadding` will apply dynamic padding for us (by padding to the maximum length of
# the samples passed). When using mixed precision, we add `pad_to_multiple_of=8` to pad all tensors to multiple
# of 8s, which will enable the use of Tensor Cores on NVIDIA hardware with compute capability >= 7.5 (Volta).
data_collator = DataCollatorWithPadding(tokenizer, pad_to_multiple_of=(8 if accelerator.use_fp16 else None))
train_dataloader = DataLoader(
train_dataset, shuffle=True, collate_fn=data_collator, batch_size=args.per_device_train_batch_size
)
eval_dataset_for_model = eval_dataset.remove_columns(["example_id", "offset_mapping"])
eval_dataloader = DataLoader(
eval_dataset_for_model, collate_fn=data_collator, batch_size=args.per_device_eval_batch_size
)
if args.do_predict:
predict_dataset_for_model = predict_dataset.remove_columns(["example_id", "offset_mapping"])
predict_dataloader = DataLoader(
predict_dataset_for_model, collate_fn=data_collator, batch_size=args.per_device_eval_batch_size
)
# Post-processing:
def post_processing_function(examples, features, predictions, stage="eval"):
# Post-processing: we match the start logits and end logits to answers in the original context.
predictions = postprocess_qa_predictions(
examples=examples,
features=features,
predictions=predictions,
version_2_with_negative=args.version_2_with_negative,
n_best_size=args.n_best_size,
max_answer_length=args.max_answer_length,
null_score_diff_threshold=args.null_score_diff_threshold,
output_dir=args.output_dir,
prefix=stage,
)
# Format the result to the format the metric expects.
if args.version_2_with_negative:
formatted_predictions = [
{"id": k, "prediction_text": v, "no_answer_probability": 0.0} for k, v in predictions.items()
]
else:
formatted_predictions = [{"id": k, "prediction_text": v} for k, v in predictions.items()]
references = [{"id": ex["id"], "answers": ex[answer_column_name]} for ex in examples]
return EvalPrediction(predictions=formatted_predictions, label_ids=references)
metric = load_metric("squad_v2" if args.version_2_with_negative else "squad")
# Create and fill numpy array of size len_of_validation_data * max_length_of_output_tensor
def create_and_fill_np_array(start_or_end_logits, dataset, max_len):
"""
Create and fill numpy array of size len_of_validation_data * max_length_of_output_tensor
Args:
start_or_end_logits(:obj:`tensor`):
This is the output predictions of the model. We can only enter either start or end logits.
eval_dataset: Evaluation dataset
max_len(:obj:`int`):
The maximum length of the output tensor. ( See the model.eval() part for more details )
"""
step = 0
# create a numpy array and fill it with -100.
logits_concat = np.full((len(dataset), max_len), -100, dtype=np.float64)
# Now since we have create an array now we will populate it with the outputs gathered using accelerator.gather
for i, output_logit in enumerate(start_or_end_logits): # populate columns
# We have to fill it such that we have to take the whole tensor and replace it on the newly created array
# And after every iteration we have to change the step
batch_size = output_logit.shape[0]
cols = output_logit.shape[1]
if step + batch_size < len(dataset):
logits_concat[step : step + batch_size, :cols] = output_logit
else:
logits_concat[step:, :cols] = output_logit[: len(dataset) - step]
step += batch_size
return logits_concat
# Optimizer
# Split weights in two groups, one with weight decay and the other not.
no_decay = ["bias", "LayerNorm.weight"]
optimizer_grouped_parameters = [
{
"params": [p for n, p in model.named_parameters() if not any(nd in n for nd in no_decay)],
"weight_decay": args.weight_decay,
},
{
"params": [p for n, p in model.named_parameters() if any(nd in n for nd in no_decay)],
"weight_decay": 0.0,
},
]
optimizer = AdamW(optimizer_grouped_parameters, lr=args.learning_rate)
# Prepare everything with our `accelerator`.
model, optimizer, train_dataloader, eval_dataloader = accelerator.prepare(
model, optimizer, train_dataloader, eval_dataloader
)
# Note -> the training dataloader needs to be prepared before we grab his length below (cause its length will be
# shorter in multiprocess)
# Scheduler and math around the number of training steps.
num_update_steps_per_epoch = math.ceil(len(train_dataloader) / args.gradient_accumulation_steps)
if args.max_train_steps is None:
args.max_train_steps = args.num_train_epochs * num_update_steps_per_epoch
else:
args.num_train_epochs = math.ceil(args.max_train_steps / num_update_steps_per_epoch)
lr_scheduler = get_scheduler(
name=args.lr_scheduler_type,
optimizer=optimizer,
num_warmup_steps=args.num_warmup_steps,
num_training_steps=args.max_train_steps,
)
# Train!
total_batch_size = args.per_device_train_batch_size * accelerator.num_processes * args.gradient_accumulation_steps
logger.info("***** Running training *****")
logger.info(f" Num examples = {len(train_dataset)}")
logger.info(f" Num Epochs = {args.num_train_epochs}")
logger.info(f" Instantaneous batch size per device = {args.per_device_train_batch_size}")
logger.info(f" Total train batch size (w. parallel, distributed & accumulation) = {total_batch_size}")
logger.info(f" Gradient Accumulation steps = {args.gradient_accumulation_steps}")
logger.info(f" Total optimization steps = {args.max_train_steps}")
# Only show the progress bar once on each machine.
progress_bar = tqdm(range(args.max_train_steps), disable=not accelerator.is_local_main_process)
completed_steps = 0
for epoch in range(args.num_train_epochs):
model.train()
for step, batch in enumerate(train_dataloader):
outputs = model(**batch)
loss = outputs.loss
loss = loss / args.gradient_accumulation_steps
accelerator.backward(loss)
if step % args.gradient_accumulation_steps == 0 or step == len(train_dataloader) - 1:
optimizer.step()
lr_scheduler.step()
optimizer.zero_grad()
progress_bar.update(1)
completed_steps += 1
if completed_steps >= args.max_train_steps:
break
if args.push_to_hub and epoch < args.num_train_epochs - 1:
accelerator.wait_for_everyone()
unwrapped_model = accelerator.unwrap_model(model)
unwrapped_model.save_pretrained(args.output_dir, save_function=accelerator.save)
if accelerator.is_main_process:
tokenizer.save_pretrained(args.output_dir)
repo.push_to_hub(
commit_message=f"Training in progress epoch {epoch}", blocking=False, auto_lfs_prune=True
)
# Evaluation
logger.info("***** Running Evaluation *****")
logger.info(f" Num examples = {len(eval_dataset)}")
logger.info(f" Batch size = {args.per_device_eval_batch_size}")
all_start_logits = []
all_end_logits = []
for step, batch in enumerate(eval_dataloader):
with torch.no_grad():
outputs = model(**batch)
start_logits = outputs.start_logits
end_logits = outputs.end_logits
if not args.pad_to_max_length: # necessary to pad predictions and labels for being gathered
start_logits = accelerator.pad_across_processes(start_logits, dim=1, pad_index=-100)
end_logits = accelerator.pad_across_processes(end_logits, dim=1, pad_index=-100)
all_start_logits.append(accelerator.gather(start_logits).cpu().numpy())
all_end_logits.append(accelerator.gather(end_logits).cpu().numpy())
max_len = max([x.shape[1] for x in all_start_logits]) # Get the max_length of the tensor
# concatenate the numpy array
start_logits_concat = create_and_fill_np_array(all_start_logits, eval_dataset, max_len)
end_logits_concat = create_and_fill_np_array(all_end_logits, eval_dataset, max_len)
# delete the list of numpy arrays
del all_start_logits
del all_end_logits
outputs_numpy = (start_logits_concat, end_logits_concat)
prediction = post_processing_function(eval_examples, eval_dataset, outputs_numpy)
eval_metric = metric.compute(predictions=prediction.predictions, references=prediction.label_ids)
logger.info(f"Evaluation metrics: {eval_metric}")
# Prediction
if args.do_predict:
logger.info("***** Running Prediction *****")
logger.info(f" Num examples = {len(predict_dataset)}")
logger.info(f" Batch size = {args.per_device_eval_batch_size}")
all_start_logits = []
all_end_logits = []
for step, batch in enumerate(predict_dataloader):
with torch.no_grad():
outputs = model(**batch)
start_logits = outputs.start_logits
end_logits = outputs.end_logits
if not args.pad_to_max_length: # necessary to pad predictions and labels for being gathered
start_logits = accelerator.pad_across_processes(start_logits, dim=1, pad_index=-100)
end_logits = accelerator.pad_across_processes(start_logits, dim=1, pad_index=-100)
all_start_logits.append(accelerator.gather(start_logits).cpu().numpy())
all_end_logits.append(accelerator.gather(end_logits).cpu().numpy())
max_len = max([x.shape[1] for x in all_start_logits]) # Get the max_length of the tensor
# concatenate the numpy array
start_logits_concat = create_and_fill_np_array(all_start_logits, predict_dataset, max_len)
end_logits_concat = create_and_fill_np_array(all_end_logits, predict_dataset, max_len)
# delete the list of numpy arrays
del all_start_logits
del all_end_logits
outputs_numpy = (start_logits_concat, end_logits_concat)
prediction = post_processing_function(predict_examples, predict_dataset, outputs_numpy)
predict_metric = metric.compute(predictions=prediction.predictions, references=prediction.label_ids)
logger.info(f"Predict metrics: {predict_metric}")
if args.output_dir is not None:
accelerator.wait_for_everyone()
unwrapped_model = accelerator.unwrap_model(model)
unwrapped_model.save_pretrained(args.output_dir, save_function=accelerator.save)
if accelerator.is_main_process:
tokenizer.save_pretrained(args.output_dir)
if args.push_to_hub:
repo.push_to_hub(commit_message="End of training", auto_lfs_prune=True)
if __name__ == "__main__":
main()
| 37,599 | 44.520581 | 120 | py |
robust-transformers | robust-transformers-main/examples/pytorch/token-classification/run_ner_no_trainer.py | #!/usr/bin/env python
# coding=utf-8
# Copyright 2021 The HuggingFace Inc. team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
"""
Fine-tuning a 🤗 Transformers model on token classification tasks (NER, POS, CHUNKS) relying on the accelerate library
without using a Trainer.
"""
import argparse
import logging
import math
import os
import random
from pathlib import Path
import datasets
import torch
from datasets import ClassLabel, load_dataset, load_metric
from torch.utils.data import DataLoader
from tqdm.auto import tqdm
import transformers
from accelerate import Accelerator
from huggingface_hub import Repository
from transformers import (
CONFIG_MAPPING,
MODEL_MAPPING,
AdamW,
AutoConfig,
AutoModelForTokenClassification,
AutoTokenizer,
DataCollatorForTokenClassification,
PretrainedConfig,
SchedulerType,
default_data_collator,
get_scheduler,
set_seed,
)
from transformers.file_utils import get_full_repo_name
from transformers.utils.versions import require_version
logger = logging.getLogger(__name__)
require_version("datasets>=1.8.0", "To fix: pip install -r examples/pytorch/token-classification/requirements.txt")
# You should update this to your particular problem to have better documentation of `model_type`
MODEL_CONFIG_CLASSES = list(MODEL_MAPPING.keys())
MODEL_TYPES = tuple(conf.model_type for conf in MODEL_CONFIG_CLASSES)
def parse_args():
parser = argparse.ArgumentParser(
description="Finetune a transformers model on a text classification task (NER) with accelerate library"
)
parser.add_argument(
"--dataset_name",
type=str,
default=None,
help="The name of the dataset to use (via the datasets library).",
)
parser.add_argument(
"--dataset_config_name",
type=str,
default=None,
help="The configuration name of the dataset to use (via the datasets library).",
)
parser.add_argument(
"--train_file", type=str, default=None, help="A csv or a json file containing the training data."
)
parser.add_argument(
"--validation_file", type=str, default=None, help="A csv or a json file containing the validation data."
)
parser.add_argument(
"--text_column_name",
type=str,
default=None,
help="The column name of text to input in the file (a csv or JSON file).",
)
parser.add_argument(
"--label_column_name",
type=str,
default=None,
help="The column name of label to input in the file (a csv or JSON file).",
)
parser.add_argument(
"--max_length",
type=int,
default=128,
help=(
"The maximum total input sequence length after tokenization. Sequences longer than this will be truncated,"
" sequences shorter will be padded if `--pad_to_max_length` is passed."
),
)
parser.add_argument(
"--pad_to_max_length",
action="store_true",
help="If passed, pad all samples to `max_length`. Otherwise, dynamic padding is used.",
)
parser.add_argument(
"--model_name_or_path",
type=str,
help="Path to pretrained model or model identifier from huggingface.co/models.",
required=True,
)
parser.add_argument(
"--config_name",
type=str,
default=None,
help="Pretrained config name or path if not the same as model_name",
)
parser.add_argument(
"--tokenizer_name",
type=str,
default=None,
help="Pretrained tokenizer name or path if not the same as model_name",
)
parser.add_argument(
"--per_device_train_batch_size",
type=int,
default=8,
help="Batch size (per device) for the training dataloader.",
)
parser.add_argument(
"--per_device_eval_batch_size",
type=int,
default=8,
help="Batch size (per device) for the evaluation dataloader.",
)
parser.add_argument(
"--learning_rate",
type=float,
default=5e-5,
help="Initial learning rate (after the potential warmup period) to use.",
)
parser.add_argument("--weight_decay", type=float, default=0.0, help="Weight decay to use.")
parser.add_argument("--num_train_epochs", type=int, default=3, help="Total number of training epochs to perform.")
parser.add_argument(
"--max_train_steps",
type=int,
default=None,
help="Total number of training steps to perform. If provided, overrides num_train_epochs.",
)
parser.add_argument(
"--gradient_accumulation_steps",
type=int,
default=1,
help="Number of updates steps to accumulate before performing a backward/update pass.",
)
parser.add_argument(
"--lr_scheduler_type",
type=SchedulerType,
default="linear",
help="The scheduler type to use.",
choices=["linear", "cosine", "cosine_with_restarts", "polynomial", "constant", "constant_with_warmup"],
)
parser.add_argument(
"--num_warmup_steps", type=int, default=0, help="Number of steps for the warmup in the lr scheduler."
)
parser.add_argument("--output_dir", type=str, default=None, help="Where to store the final model.")
parser.add_argument("--seed", type=int, default=None, help="A seed for reproducible training.")
parser.add_argument(
"--model_type",
type=str,
default=None,
help="Model type to use if training from scratch.",
choices=MODEL_TYPES,
)
parser.add_argument(
"--label_all_tokens",
action="store_true",
help="Setting labels of all special tokens to -100 and thus PyTorch will ignore them.",
)
parser.add_argument(
"--return_entity_level_metrics",
action="store_true",
help="Indication whether entity level metrics are to be returner.",
)
parser.add_argument(
"--task_name",
type=str,
default="ner",
choices=["ner", "pos", "chunk"],
help="The name of the task.",
)
parser.add_argument(
"--debug",
action="store_true",
help="Activate debug mode and run training only with a subset of data.",
)
parser.add_argument("--push_to_hub", action="store_true", help="Whether or not to push the model to the Hub.")
parser.add_argument(
"--hub_model_id", type=str, help="The name of the repository to keep in sync with the local `output_dir`."
)
parser.add_argument("--hub_token", type=str, help="The token to use to push to the Model Hub.")
args = parser.parse_args()
# Sanity checks
if args.task_name is None and args.train_file is None and args.validation_file is None:
raise ValueError("Need either a task name or a training/validation file.")
else:
if args.train_file is not None:
extension = args.train_file.split(".")[-1]
assert extension in ["csv", "json"], "`train_file` should be a csv or a json file."
if args.validation_file is not None:
extension = args.validation_file.split(".")[-1]
assert extension in ["csv", "json"], "`validation_file` should be a csv or a json file."
if args.push_to_hub:
assert args.output_dir is not None, "Need an `output_dir` to create a repo when `--push_to_hub` is passed."
return args
def main():
args = parse_args()
# Initialize the accelerator. We will let the accelerator handle device placement for us in this example.
accelerator = Accelerator()
# Make one log on every process with the configuration for debugging.
logging.basicConfig(
format="%(asctime)s - %(levelname)s - %(name)s - %(message)s",
datefmt="%m/%d/%Y %H:%M:%S",
level=logging.INFO,
)
logger.info(accelerator.state)
# Setup logging, we only want one process per machine to log things on the screen.
# accelerator.is_local_main_process is only True for one process per machine.
logger.setLevel(logging.INFO if accelerator.is_local_main_process else logging.ERROR)
if accelerator.is_local_main_process:
datasets.utils.logging.set_verbosity_warning()
transformers.utils.logging.set_verbosity_info()
else:
datasets.utils.logging.set_verbosity_error()
transformers.utils.logging.set_verbosity_error()
# If passed along, set the training seed now.
if args.seed is not None:
set_seed(args.seed)
# Handle the repository creation
if accelerator.is_main_process:
if args.push_to_hub:
if args.hub_model_id is None:
repo_name = get_full_repo_name(Path(args.output_dir).name, token=args.hub_token)
else:
repo_name = args.hub_model_id
repo = Repository(args.output_dir, clone_from=repo_name)
elif args.output_dir is not None:
os.makedirs(args.output_dir, exist_ok=True)
accelerator.wait_for_everyone()
# Get the datasets: you can either provide your own CSV/JSON/TXT training and evaluation files (see below)
# or just provide the name of one of the public datasets for token classification task available on the hub at https://huggingface.co/datasets/
# (the dataset will be downloaded automatically from the datasets Hub).
#
# For CSV/JSON files, this script will use the column called 'tokens' or the first column if no column called
# 'tokens' is found. You can easily tweak this behavior (see below).
#
# In distributed training, the load_dataset function guarantee that only one local process can concurrently
# download the dataset.
if args.dataset_name is not None:
# Downloading and loading a dataset from the hub.
raw_datasets = load_dataset(args.dataset_name, args.dataset_config_name)
else:
data_files = {}
if args.train_file is not None:
data_files["train"] = args.train_file
if args.validation_file is not None:
data_files["validation"] = args.validation_file
extension = args.train_file.split(".")[-1]
raw_datasets = load_dataset(extension, data_files=data_files)
# Trim a number of training examples
if args.debug:
for split in raw_datasets.keys():
raw_datasets[split] = raw_datasets[split].select(range(100))
# See more about loading any type of standard or custom dataset (from files, python dict, pandas DataFrame, etc) at
# https://huggingface.co/docs/datasets/loading_datasets.html.
if raw_datasets["train"] is not None:
column_names = raw_datasets["train"].column_names
features = raw_datasets["train"].features
else:
column_names = raw_datasets["validation"].column_names
features = raw_datasets["validation"].features
if args.text_column_name is not None:
text_column_name = args.text_column_name
elif "tokens" in column_names:
text_column_name = "tokens"
else:
text_column_name = column_names[0]
if args.label_column_name is not None:
label_column_name = args.label_column_name
elif f"{args.task_name}_tags" in column_names:
label_column_name = f"{args.task_name}_tags"
else:
label_column_name = column_names[1]
# In the event the labels are not a `Sequence[ClassLabel]`, we will need to go through the dataset to get the
# unique labels.
def get_label_list(labels):
unique_labels = set()
for label in labels:
unique_labels = unique_labels | set(label)
label_list = list(unique_labels)
label_list.sort()
return label_list
# If the labels are of type ClassLabel, they are already integers and we have the map stored somewhere.
# Otherwise, we have to get the list of labels manually.
labels_are_int = isinstance(features[label_column_name].feature, ClassLabel)
if labels_are_int:
label_list = features[label_column_name].feature.names
label_to_id = {i: i for i in range(len(label_list))}
else:
label_list = get_label_list(raw_datasets["train"][label_column_name])
label_to_id = {l: i for i, l in enumerate(label_list)}
num_labels = len(label_list)
# Load pretrained model and tokenizer
#
# In distributed training, the .from_pretrained methods guarantee that only one local process can concurrently
# download model & vocab.
if args.config_name:
config = AutoConfig.from_pretrained(args.config_name, num_labels=num_labels)
elif args.model_name_or_path:
config = AutoConfig.from_pretrained(args.model_name_or_path, num_labels=num_labels)
else:
config = CONFIG_MAPPING[args.model_type]()
logger.warning("You are instantiating a new config instance from scratch.")
tokenizer_name_or_path = args.tokenizer_name if args.tokenizer_name else args.model_name_or_path
if not tokenizer_name_or_path:
raise ValueError(
"You are instantiating a new tokenizer from scratch. This is not supported by this script."
"You can do it from another script, save it, and load it from here, using --tokenizer_name."
)
if config.model_type in {"gpt2", "roberta"}:
tokenizer = AutoTokenizer.from_pretrained(tokenizer_name_or_path, use_fast=True, add_prefix_space=True)
else:
tokenizer = AutoTokenizer.from_pretrained(tokenizer_name_or_path, use_fast=True)
if args.model_name_or_path:
model = AutoModelForTokenClassification.from_pretrained(
args.model_name_or_path,
from_tf=bool(".ckpt" in args.model_name_or_path),
config=config,
)
else:
logger.info("Training new model from scratch")
model = AutoModelForTokenClassification.from_config(config)
model.resize_token_embeddings(len(tokenizer))
# Model has labels -> use them.
if model.config.label2id != PretrainedConfig(num_labels=num_labels).label2id:
if list(sorted(model.config.label2id.keys())) == list(sorted(label_list)):
# Reorganize `label_list` to match the ordering of the model.
if labels_are_int:
label_to_id = {i: int(model.config.label2id[l]) for i, l in enumerate(label_list)}
label_list = [model.config.id2label[i] for i in range(num_labels)]
else:
label_list = [model.config.id2label[i] for i in range(num_labels)]
label_to_id = {l: i for i, l in enumerate(label_list)}
else:
logger.warning(
"Your model seems to have been trained with labels, but they don't match the dataset: ",
f"model labels: {list(sorted(model.config.label2id.keys()))}, dataset labels: {list(sorted(label_list))}."
"\nIgnoring the model labels as a result.",
)
# Set the correspondences label/ID inside the model config
model.config.label2id = {l: i for i, l in enumerate(label_list)}
model.config.id2label = {i: l for i, l in enumerate(label_list)}
# Map that sends B-Xxx label to its I-Xxx counterpart
b_to_i_label = []
for idx, label in enumerate(label_list):
if label.startswith("B-") and label.replace("B-", "I-") in label_list:
b_to_i_label.append(label_list.index(label.replace("B-", "I-")))
else:
b_to_i_label.append(idx)
# Preprocessing the datasets.
# First we tokenize all the texts.
padding = "max_length" if args.pad_to_max_length else False
# Tokenize all texts and align the labels with them.
def tokenize_and_align_labels(examples):
tokenized_inputs = tokenizer(
examples[text_column_name],
max_length=args.max_length,
padding=padding,
truncation=True,
# We use this argument because the texts in our dataset are lists of words (with a label for each word).
is_split_into_words=True,
)
labels = []
for i, label in enumerate(examples[label_column_name]):
word_ids = tokenized_inputs.word_ids(batch_index=i)
previous_word_idx = None
label_ids = []
for word_idx in word_ids:
# Special tokens have a word id that is None. We set the label to -100 so they are automatically
# ignored in the loss function.
if word_idx is None:
label_ids.append(-100)
# We set the label for the first token of each word.
elif word_idx != previous_word_idx:
label_ids.append(label_to_id[label[word_idx]])
# For the other tokens in a word, we set the label to either the current label or -100, depending on
# the label_all_tokens flag.
else:
if args.label_all_tokens:
label_ids.append(b_to_i_label[label_to_id[label[word_idx]]])
else:
label_ids.append(-100)
previous_word_idx = word_idx
labels.append(label_ids)
tokenized_inputs["labels"] = labels
return tokenized_inputs
with accelerator.main_process_first():
processed_raw_datasets = raw_datasets.map(
tokenize_and_align_labels,
batched=True,
remove_columns=raw_datasets["train"].column_names,
desc="Running tokenizer on dataset",
)
train_dataset = processed_raw_datasets["train"]
eval_dataset = processed_raw_datasets["validation"]
# Log a few random samples from the training set:
for index in random.sample(range(len(train_dataset)), 3):
logger.info(f"Sample {index} of the training set: {train_dataset[index]}.")
# DataLoaders creation:
if args.pad_to_max_length:
# If padding was already done ot max length, we use the default data collator that will just convert everything
# to tensors.
data_collator = default_data_collator
else:
# Otherwise, `DataCollatorForTokenClassification` will apply dynamic padding for us (by padding to the maximum length of
# the samples passed). When using mixed precision, we add `pad_to_multiple_of=8` to pad all tensors to multiple
# of 8s, which will enable the use of Tensor Cores on NVIDIA hardware with compute capability >= 7.5 (Volta).
data_collator = DataCollatorForTokenClassification(
tokenizer, pad_to_multiple_of=(8 if accelerator.use_fp16 else None)
)
train_dataloader = DataLoader(
train_dataset, shuffle=True, collate_fn=data_collator, batch_size=args.per_device_train_batch_size
)
eval_dataloader = DataLoader(eval_dataset, collate_fn=data_collator, batch_size=args.per_device_eval_batch_size)
# Optimizer
# Split weights in two groups, one with weight decay and the other not.
no_decay = ["bias", "LayerNorm.weight"]
optimizer_grouped_parameters = [
{
"params": [p for n, p in model.named_parameters() if not any(nd in n for nd in no_decay)],
"weight_decay": args.weight_decay,
},
{
"params": [p for n, p in model.named_parameters() if any(nd in n for nd in no_decay)],
"weight_decay": 0.0,
},
]
optimizer = AdamW(optimizer_grouped_parameters, lr=args.learning_rate)
# Use the device given by the `accelerator` object.
device = accelerator.device
model.to(device)
# Prepare everything with our `accelerator`.
model, optimizer, train_dataloader, eval_dataloader = accelerator.prepare(
model, optimizer, train_dataloader, eval_dataloader
)
# Note -> the training dataloader needs to be prepared before we grab his length below (cause its length will be
# shorter in multiprocess)
# Scheduler and math around the number of training steps.
num_update_steps_per_epoch = math.ceil(len(train_dataloader) / args.gradient_accumulation_steps)
if args.max_train_steps is None:
args.max_train_steps = args.num_train_epochs * num_update_steps_per_epoch
else:
args.num_train_epochs = math.ceil(args.max_train_steps / num_update_steps_per_epoch)
lr_scheduler = get_scheduler(
name=args.lr_scheduler_type,
optimizer=optimizer,
num_warmup_steps=args.num_warmup_steps,
num_training_steps=args.max_train_steps,
)
# Metrics
metric = load_metric("seqeval")
def get_labels(predictions, references):
# Transform predictions and references tensos to numpy arrays
if device.type == "cpu":
y_pred = predictions.detach().clone().numpy()
y_true = references.detach().clone().numpy()
else:
y_pred = predictions.detach().cpu().clone().numpy()
y_true = references.detach().cpu().clone().numpy()
# Remove ignored index (special tokens)
true_predictions = [
[label_list[p] for (p, l) in zip(pred, gold_label) if l != -100]
for pred, gold_label in zip(y_pred, y_true)
]
true_labels = [
[label_list[l] for (p, l) in zip(pred, gold_label) if l != -100]
for pred, gold_label in zip(y_pred, y_true)
]
return true_predictions, true_labels
def compute_metrics():
results = metric.compute()
if args.return_entity_level_metrics:
# Unpack nested dictionaries
final_results = {}
for key, value in results.items():
if isinstance(value, dict):
for n, v in value.items():
final_results[f"{key}_{n}"] = v
else:
final_results[key] = value
return final_results
else:
return {
"precision": results["overall_precision"],
"recall": results["overall_recall"],
"f1": results["overall_f1"],
"accuracy": results["overall_accuracy"],
}
# Train!
total_batch_size = args.per_device_train_batch_size * accelerator.num_processes * args.gradient_accumulation_steps
logger.info("***** Running training *****")
logger.info(f" Num examples = {len(train_dataset)}")
logger.info(f" Num Epochs = {args.num_train_epochs}")
logger.info(f" Instantaneous batch size per device = {args.per_device_train_batch_size}")
logger.info(f" Total train batch size (w. parallel, distributed & accumulation) = {total_batch_size}")
logger.info(f" Gradient Accumulation steps = {args.gradient_accumulation_steps}")
logger.info(f" Total optimization steps = {args.max_train_steps}")
# Only show the progress bar once on each machine.
progress_bar = tqdm(range(args.max_train_steps), disable=not accelerator.is_local_main_process)
completed_steps = 0
for epoch in range(args.num_train_epochs):
model.train()
for step, batch in enumerate(train_dataloader):
outputs = model(**batch)
loss = outputs.loss
loss = loss / args.gradient_accumulation_steps
accelerator.backward(loss)
if step % args.gradient_accumulation_steps == 0 or step == len(train_dataloader) - 1:
optimizer.step()
lr_scheduler.step()
optimizer.zero_grad()
progress_bar.update(1)
completed_steps += 1
if completed_steps >= args.max_train_steps:
break
model.eval()
for step, batch in enumerate(eval_dataloader):
with torch.no_grad():
outputs = model(**batch)
predictions = outputs.logits.argmax(dim=-1)
labels = batch["labels"]
if not args.pad_to_max_length: # necessary to pad predictions and labels for being gathered
predictions = accelerator.pad_across_processes(predictions, dim=1, pad_index=-100)
labels = accelerator.pad_across_processes(labels, dim=1, pad_index=-100)
predictions_gathered = accelerator.gather(predictions)
labels_gathered = accelerator.gather(labels)
preds, refs = get_labels(predictions_gathered, labels_gathered)
metric.add_batch(
predictions=preds,
references=refs,
) # predictions and preferences are expected to be a nested list of labels, not label_ids
# eval_metric = metric.compute()
eval_metric = compute_metrics()
accelerator.print(f"epoch {epoch}:", eval_metric)
if args.push_to_hub and epoch < args.num_train_epochs - 1:
accelerator.wait_for_everyone()
unwrapped_model = accelerator.unwrap_model(model)
unwrapped_model.save_pretrained(args.output_dir, save_function=accelerator.save)
if accelerator.is_main_process:
tokenizer.save_pretrained(args.output_dir)
repo.push_to_hub(
commit_message=f"Training in progress epoch {epoch}", blocking=False, auto_lfs_prune=True
)
if args.output_dir is not None:
accelerator.wait_for_everyone()
unwrapped_model = accelerator.unwrap_model(model)
unwrapped_model.save_pretrained(args.output_dir, save_function=accelerator.save)
if accelerator.is_main_process:
tokenizer.save_pretrained(args.output_dir)
if args.push_to_hub:
repo.push_to_hub(commit_message="End of training", auto_lfs_prune=True)
if __name__ == "__main__":
main()
| 26,309 | 40.498423 | 147 | py |
robust-transformers | robust-transformers-main/examples/pytorch/token-classification/run_ner.py | #!/usr/bin/env python
# coding=utf-8
# Copyright 2020 The HuggingFace Team All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
"""
Fine-tuning the library models for token classification.
"""
# You can also adapt this script on your own token classification task and datasets. Pointers for this are left as
# comments.
import logging
import os
import sys
from dataclasses import dataclass, field
from typing import Optional
import datasets
import numpy as np
from datasets import ClassLabel, load_dataset, load_metric
import transformers
from transformers import (
AutoConfig,
AutoModelForTokenClassification,
AutoTokenizer,
DataCollatorForTokenClassification,
HfArgumentParser,
PretrainedConfig,
PreTrainedTokenizerFast,
Trainer,
TrainingArguments,
set_seed,
)
from transformers.trainer_utils import get_last_checkpoint
from transformers.utils import check_min_version
from transformers.utils.versions import require_version
# Will error if the minimal version of Transformers is not installed. Remove at your own risks.
check_min_version("4.18.0.dev0")
require_version("datasets>=1.8.0", "To fix: pip install -r examples/pytorch/token-classification/requirements.txt")
logger = logging.getLogger(__name__)
@dataclass
class ModelArguments:
"""
Arguments pertaining to which model/config/tokenizer we are going to fine-tune from.
"""
model_name_or_path: str = field(
metadata={"help": "Path to pretrained model or model identifier from huggingface.co/models"}
)
config_name: Optional[str] = field(
default=None, metadata={"help": "Pretrained config name or path if not the same as model_name"}
)
tokenizer_name: Optional[str] = field(
default=None, metadata={"help": "Pretrained tokenizer name or path if not the same as model_name"}
)
cache_dir: Optional[str] = field(
default=None,
metadata={"help": "Where do you want to store the pretrained models downloaded from huggingface.co"},
)
model_revision: str = field(
default="main",
metadata={"help": "The specific model version to use (can be a branch name, tag name or commit id)."},
)
use_auth_token: bool = field(
default=False,
metadata={
"help": "Will use the token generated when running `transformers-cli login` (necessary to use this script "
"with private models)."
},
)
@dataclass
class DataTrainingArguments:
"""
Arguments pertaining to what data we are going to input our model for training and eval.
"""
task_name: Optional[str] = field(default="ner", metadata={"help": "The name of the task (ner, pos...)."})
dataset_name: Optional[str] = field(
default=None, metadata={"help": "The name of the dataset to use (via the datasets library)."}
)
dataset_config_name: Optional[str] = field(
default=None, metadata={"help": "The configuration name of the dataset to use (via the datasets library)."}
)
train_file: Optional[str] = field(
default=None, metadata={"help": "The input training data file (a csv or JSON file)."}
)
validation_file: Optional[str] = field(
default=None,
metadata={"help": "An optional input evaluation data file to evaluate on (a csv or JSON file)."},
)
test_file: Optional[str] = field(
default=None,
metadata={"help": "An optional input test data file to predict on (a csv or JSON file)."},
)
text_column_name: Optional[str] = field(
default=None, metadata={"help": "The column name of text to input in the file (a csv or JSON file)."}
)
label_column_name: Optional[str] = field(
default=None, metadata={"help": "The column name of label to input in the file (a csv or JSON file)."}
)
overwrite_cache: bool = field(
default=False, metadata={"help": "Overwrite the cached training and evaluation sets"}
)
preprocessing_num_workers: Optional[int] = field(
default=None,
metadata={"help": "The number of processes to use for the preprocessing."},
)
max_seq_length: int = field(
default=None,
metadata={
"help": "The maximum total input sequence length after tokenization. If set, sequences longer "
"than this will be truncated, sequences shorter will be padded."
},
)
pad_to_max_length: bool = field(
default=False,
metadata={
"help": "Whether to pad all samples to model maximum sentence length. "
"If False, will pad the samples dynamically when batching to the maximum length in the batch. More "
"efficient on GPU but very bad for TPU."
},
)
max_train_samples: Optional[int] = field(
default=None,
metadata={
"help": "For debugging purposes or quicker training, truncate the number of training examples to this "
"value if set."
},
)
max_eval_samples: Optional[int] = field(
default=None,
metadata={
"help": "For debugging purposes or quicker training, truncate the number of evaluation examples to this "
"value if set."
},
)
max_predict_samples: Optional[int] = field(
default=None,
metadata={
"help": "For debugging purposes or quicker training, truncate the number of prediction examples to this "
"value if set."
},
)
label_all_tokens: bool = field(
default=False,
metadata={
"help": "Whether to put the label for one word on all tokens of generated by that word or just on the "
"one (in which case the other tokens will have a padding index)."
},
)
return_entity_level_metrics: bool = field(
default=False,
metadata={"help": "Whether to return all the entity levels during evaluation or just the overall ones."},
)
def __post_init__(self):
if self.dataset_name is None and self.train_file is None and self.validation_file is None:
raise ValueError("Need either a dataset name or a training/validation file.")
else:
if self.train_file is not None:
extension = self.train_file.split(".")[-1]
assert extension in ["csv", "json"], "`train_file` should be a csv or a json file."
if self.validation_file is not None:
extension = self.validation_file.split(".")[-1]
assert extension in ["csv", "json"], "`validation_file` should be a csv or a json file."
self.task_name = self.task_name.lower()
def main():
# See all possible arguments in src/transformers/training_args.py
# or by passing the --help flag to this script.
# We now keep distinct sets of args, for a cleaner separation of concerns.
parser = HfArgumentParser((ModelArguments, DataTrainingArguments, TrainingArguments))
if len(sys.argv) == 2 and sys.argv[1].endswith(".json"):
# If we pass only one argument to the script and it's the path to a json file,
# let's parse it to get our arguments.
model_args, data_args, training_args = parser.parse_json_file(json_file=os.path.abspath(sys.argv[1]))
else:
model_args, data_args, training_args = parser.parse_args_into_dataclasses()
# Setup logging
logging.basicConfig(
format="%(asctime)s - %(levelname)s - %(name)s - %(message)s",
datefmt="%m/%d/%Y %H:%M:%S",
handlers=[logging.StreamHandler(sys.stdout)],
)
log_level = training_args.get_process_log_level()
logger.setLevel(log_level)
datasets.utils.logging.set_verbosity(log_level)
transformers.utils.logging.set_verbosity(log_level)
transformers.utils.logging.enable_default_handler()
transformers.utils.logging.enable_explicit_format()
# Log on each process the small summary:
logger.warning(
f"Process rank: {training_args.local_rank}, device: {training_args.device}, n_gpu: {training_args.n_gpu}"
+ f"distributed training: {bool(training_args.local_rank != -1)}, 16-bits training: {training_args.fp16}"
)
logger.info(f"Training/evaluation parameters {training_args}")
# Detecting last checkpoint.
last_checkpoint = None
if os.path.isdir(training_args.output_dir) and training_args.do_train and not training_args.overwrite_output_dir:
last_checkpoint = get_last_checkpoint(training_args.output_dir)
if last_checkpoint is None and len(os.listdir(training_args.output_dir)) > 0:
raise ValueError(
f"Output directory ({training_args.output_dir}) already exists and is not empty. "
"Use --overwrite_output_dir to overcome."
)
elif last_checkpoint is not None and training_args.resume_from_checkpoint is None:
logger.info(
f"Checkpoint detected, resuming training at {last_checkpoint}. To avoid this behavior, change "
"the `--output_dir` or add `--overwrite_output_dir` to train from scratch."
)
# Set seed before initializing model.
set_seed(training_args.seed)
# Get the datasets: you can either provide your own CSV/JSON/TXT training and evaluation files (see below)
# or just provide the name of one of the public datasets available on the hub at https://huggingface.co/datasets/
# (the dataset will be downloaded automatically from the datasets Hub).
#
# For CSV/JSON files, this script will use the column called 'text' or the first column if no column called
# 'text' is found. You can easily tweak this behavior (see below).
#
# In distributed training, the load_dataset function guarantee that only one local process can concurrently
# download the dataset.
if data_args.dataset_name is not None:
# Downloading and loading a dataset from the hub.
raw_datasets = load_dataset(
data_args.dataset_name, data_args.dataset_config_name, cache_dir=model_args.cache_dir
)
else:
data_files = {}
if data_args.train_file is not None:
data_files["train"] = data_args.train_file
if data_args.validation_file is not None:
data_files["validation"] = data_args.validation_file
if data_args.test_file is not None:
data_files["test"] = data_args.test_file
extension = data_args.train_file.split(".")[-1]
raw_datasets = load_dataset(extension, data_files=data_files, cache_dir=model_args.cache_dir)
# See more about loading any type of standard or custom dataset (from files, python dict, pandas DataFrame, etc) at
# https://huggingface.co/docs/datasets/loading_datasets.html.
if training_args.do_train:
column_names = raw_datasets["train"].column_names
features = raw_datasets["train"].features
else:
column_names = raw_datasets["validation"].column_names
features = raw_datasets["validation"].features
if data_args.text_column_name is not None:
text_column_name = data_args.text_column_name
elif "tokens" in column_names:
text_column_name = "tokens"
else:
text_column_name = column_names[0]
if data_args.label_column_name is not None:
label_column_name = data_args.label_column_name
elif f"{data_args.task_name}_tags" in column_names:
label_column_name = f"{data_args.task_name}_tags"
else:
label_column_name = column_names[1]
# In the event the labels are not a `Sequence[ClassLabel]`, we will need to go through the dataset to get the
# unique labels.
def get_label_list(labels):
unique_labels = set()
for label in labels:
unique_labels = unique_labels | set(label)
label_list = list(unique_labels)
label_list.sort()
return label_list
# If the labels are of type ClassLabel, they are already integers and we have the map stored somewhere.
# Otherwise, we have to get the list of labels manually.
labels_are_int = isinstance(features[label_column_name].feature, ClassLabel)
if labels_are_int:
label_list = features[label_column_name].feature.names
label_to_id = {i: i for i in range(len(label_list))}
else:
label_list = get_label_list(raw_datasets["train"][label_column_name])
label_to_id = {l: i for i, l in enumerate(label_list)}
num_labels = len(label_list)
# Load pretrained model and tokenizer
#
# Distributed training:
# The .from_pretrained methods guarantee that only one local process can concurrently
# download model & vocab.
config = AutoConfig.from_pretrained(
model_args.config_name if model_args.config_name else model_args.model_name_or_path,
num_labels=num_labels,
finetuning_task=data_args.task_name,
cache_dir=model_args.cache_dir,
revision=model_args.model_revision,
use_auth_token=True if model_args.use_auth_token else None,
)
tokenizer_name_or_path = model_args.tokenizer_name if model_args.tokenizer_name else model_args.model_name_or_path
if config.model_type in {"gpt2", "roberta"}:
tokenizer = AutoTokenizer.from_pretrained(
tokenizer_name_or_path,
cache_dir=model_args.cache_dir,
use_fast=True,
revision=model_args.model_revision,
use_auth_token=True if model_args.use_auth_token else None,
add_prefix_space=True,
)
else:
tokenizer = AutoTokenizer.from_pretrained(
tokenizer_name_or_path,
cache_dir=model_args.cache_dir,
use_fast=True,
revision=model_args.model_revision,
use_auth_token=True if model_args.use_auth_token else None,
)
model = AutoModelForTokenClassification.from_pretrained(
model_args.model_name_or_path,
from_tf=bool(".ckpt" in model_args.model_name_or_path),
config=config,
cache_dir=model_args.cache_dir,
revision=model_args.model_revision,
use_auth_token=True if model_args.use_auth_token else None,
)
# Tokenizer check: this script requires a fast tokenizer.
if not isinstance(tokenizer, PreTrainedTokenizerFast):
raise ValueError(
"This example script only works for models that have a fast tokenizer. Checkout the big table of models "
"at https://huggingface.co/transformers/index.html#supported-frameworks to find the model types that meet this "
"requirement"
)
# Model has labels -> use them.
if model.config.label2id != PretrainedConfig(num_labels=num_labels).label2id:
if list(sorted(model.config.label2id.keys())) == list(sorted(label_list)):
# Reorganize `label_list` to match the ordering of the model.
if labels_are_int:
label_to_id = {i: int(model.config.label2id[l]) for i, l in enumerate(label_list)}
label_list = [model.config.id2label[i] for i in range(num_labels)]
else:
label_list = [model.config.id2label[i] for i in range(num_labels)]
label_to_id = {l: i for i, l in enumerate(label_list)}
else:
logger.warning(
"Your model seems to have been trained with labels, but they don't match the dataset: ",
f"model labels: {list(sorted(model.config.label2id.keys()))}, dataset labels: {list(sorted(label_list))}."
"\nIgnoring the model labels as a result.",
)
# Set the correspondences label/ID inside the model config
model.config.label2id = {l: i for i, l in enumerate(label_list)}
model.config.id2label = {i: l for i, l in enumerate(label_list)}
# Map that sends B-Xxx label to its I-Xxx counterpart
b_to_i_label = []
for idx, label in enumerate(label_list):
if label.startswith("B-") and label.replace("B-", "I-") in label_list:
b_to_i_label.append(label_list.index(label.replace("B-", "I-")))
else:
b_to_i_label.append(idx)
# Preprocessing the dataset
# Padding strategy
padding = "max_length" if data_args.pad_to_max_length else False
# Tokenize all texts and align the labels with them.
def tokenize_and_align_labels(examples):
tokenized_inputs = tokenizer(
examples[text_column_name],
padding=padding,
truncation=True,
max_length=data_args.max_seq_length,
# We use this argument because the texts in our dataset are lists of words (with a label for each word).
is_split_into_words=True,
)
labels = []
for i, label in enumerate(examples[label_column_name]):
word_ids = tokenized_inputs.word_ids(batch_index=i)
previous_word_idx = None
label_ids = []
for word_idx in word_ids:
# Special tokens have a word id that is None. We set the label to -100 so they are automatically
# ignored in the loss function.
if word_idx is None:
label_ids.append(-100)
# We set the label for the first token of each word.
elif word_idx != previous_word_idx:
label_ids.append(label_to_id[label[word_idx]])
# For the other tokens in a word, we set the label to either the current label or -100, depending on
# the label_all_tokens flag.
else:
if data_args.label_all_tokens:
label_ids.append(b_to_i_label[label_to_id[label[word_idx]]])
else:
label_ids.append(-100)
previous_word_idx = word_idx
labels.append(label_ids)
tokenized_inputs["labels"] = labels
return tokenized_inputs
if training_args.do_train:
if "train" not in raw_datasets:
raise ValueError("--do_train requires a train dataset")
train_dataset = raw_datasets["train"]
if data_args.max_train_samples is not None:
train_dataset = train_dataset.select(range(data_args.max_train_samples))
with training_args.main_process_first(desc="train dataset map pre-processing"):
train_dataset = train_dataset.map(
tokenize_and_align_labels,
batched=True,
num_proc=data_args.preprocessing_num_workers,
load_from_cache_file=not data_args.overwrite_cache,
desc="Running tokenizer on train dataset",
)
if training_args.do_eval:
if "validation" not in raw_datasets:
raise ValueError("--do_eval requires a validation dataset")
eval_dataset = raw_datasets["validation"]
if data_args.max_eval_samples is not None:
eval_dataset = eval_dataset.select(range(data_args.max_eval_samples))
with training_args.main_process_first(desc="validation dataset map pre-processing"):
eval_dataset = eval_dataset.map(
tokenize_and_align_labels,
batched=True,
num_proc=data_args.preprocessing_num_workers,
load_from_cache_file=not data_args.overwrite_cache,
desc="Running tokenizer on validation dataset",
)
if training_args.do_predict:
if "test" not in raw_datasets:
raise ValueError("--do_predict requires a test dataset")
predict_dataset = raw_datasets["test"]
if data_args.max_predict_samples is not None:
predict_dataset = predict_dataset.select(range(data_args.max_predict_samples))
with training_args.main_process_first(desc="prediction dataset map pre-processing"):
predict_dataset = predict_dataset.map(
tokenize_and_align_labels,
batched=True,
num_proc=data_args.preprocessing_num_workers,
load_from_cache_file=not data_args.overwrite_cache,
desc="Running tokenizer on prediction dataset",
)
# Data collator
data_collator = DataCollatorForTokenClassification(tokenizer, pad_to_multiple_of=8 if training_args.fp16 else None)
# Metrics
metric = load_metric("seqeval")
def compute_metrics(p):
predictions, labels = p
predictions = np.argmax(predictions, axis=2)
# Remove ignored index (special tokens)
true_predictions = [
[label_list[p] for (p, l) in zip(prediction, label) if l != -100]
for prediction, label in zip(predictions, labels)
]
true_labels = [
[label_list[l] for (p, l) in zip(prediction, label) if l != -100]
for prediction, label in zip(predictions, labels)
]
results = metric.compute(predictions=true_predictions, references=true_labels)
if data_args.return_entity_level_metrics:
# Unpack nested dictionaries
final_results = {}
for key, value in results.items():
if isinstance(value, dict):
for n, v in value.items():
final_results[f"{key}_{n}"] = v
else:
final_results[key] = value
return final_results
else:
return {
"precision": results["overall_precision"],
"recall": results["overall_recall"],
"f1": results["overall_f1"],
"accuracy": results["overall_accuracy"],
}
# Initialize our Trainer
trainer = Trainer(
model=model,
args=training_args,
train_dataset=train_dataset if training_args.do_train else None,
eval_dataset=eval_dataset if training_args.do_eval else None,
tokenizer=tokenizer,
data_collator=data_collator,
compute_metrics=compute_metrics,
)
# Training
if training_args.do_train:
checkpoint = None
if training_args.resume_from_checkpoint is not None:
checkpoint = training_args.resume_from_checkpoint
elif last_checkpoint is not None:
checkpoint = last_checkpoint
train_result = trainer.train(resume_from_checkpoint=checkpoint)
metrics = train_result.metrics
trainer.save_model() # Saves the tokenizer too for easy upload
max_train_samples = (
data_args.max_train_samples if data_args.max_train_samples is not None else len(train_dataset)
)
metrics["train_samples"] = min(max_train_samples, len(train_dataset))
trainer.log_metrics("train", metrics)
trainer.save_metrics("train", metrics)
trainer.save_state()
# Evaluation
if training_args.do_eval:
logger.info("*** Evaluate ***")
metrics = trainer.evaluate()
max_eval_samples = data_args.max_eval_samples if data_args.max_eval_samples is not None else len(eval_dataset)
metrics["eval_samples"] = min(max_eval_samples, len(eval_dataset))
trainer.log_metrics("eval", metrics)
trainer.save_metrics("eval", metrics)
# Predict
if training_args.do_predict:
logger.info("*** Predict ***")
predictions, labels, metrics = trainer.predict(predict_dataset, metric_key_prefix="predict")
predictions = np.argmax(predictions, axis=2)
# Remove ignored index (special tokens)
true_predictions = [
[label_list[p] for (p, l) in zip(prediction, label) if l != -100]
for prediction, label in zip(predictions, labels)
]
trainer.log_metrics("predict", metrics)
trainer.save_metrics("predict", metrics)
# Save predictions
output_predictions_file = os.path.join(training_args.output_dir, "predictions.txt")
if trainer.is_world_process_zero():
with open(output_predictions_file, "w") as writer:
for prediction in true_predictions:
writer.write(" ".join(prediction) + "\n")
kwargs = {"finetuned_from": model_args.model_name_or_path, "tasks": "token-classification"}
if data_args.dataset_name is not None:
kwargs["dataset_tags"] = data_args.dataset_name
if data_args.dataset_config_name is not None:
kwargs["dataset_args"] = data_args.dataset_config_name
kwargs["dataset"] = f"{data_args.dataset_name} {data_args.dataset_config_name}"
else:
kwargs["dataset"] = data_args.dataset_name
if training_args.push_to_hub:
trainer.push_to_hub(**kwargs)
else:
trainer.create_model_card(**kwargs)
def _mp_fn(index):
# For xla_spawn (TPUs)
main()
if __name__ == "__main__":
main()
| 25,434 | 41.321131 | 124 | py |
robust-transformers | robust-transformers-main/examples/pytorch/image-pretraining/run_mae.py | #!/usr/bin/env python
# coding=utf-8
# Copyright 2022 The HuggingFace Inc. team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
import logging
import os
import sys
from dataclasses import dataclass, field
from typing import Optional
import torch
from datasets import load_dataset
from torchvision.transforms import Compose, Lambda, Normalize, RandomHorizontalFlip, RandomResizedCrop, ToTensor
from torchvision.transforms.functional import InterpolationMode
import transformers
from transformers import (
HfArgumentParser,
Trainer,
TrainingArguments,
ViTFeatureExtractor,
ViTMAEConfig,
ViTMAEForPreTraining,
)
from transformers.trainer_utils import get_last_checkpoint
from transformers.utils import check_min_version
from transformers.utils.versions import require_version
""" Pre-training a 🤗 ViT model as an MAE (masked autoencoder), as proposed in https://arxiv.org/abs/2111.06377."""
logger = logging.getLogger(__name__)
# Will error if the minimal version of Transformers is not installed. Remove at your own risks.
check_min_version("4.18.0.dev0")
require_version("datasets>=1.8.0", "To fix: pip install -r examples/pytorch/image-pretraining/requirements.txt")
@dataclass
class DataTrainingArguments:
"""
Arguments pertaining to what data we are going to input our model for training and eval.
Using `HfArgumentParser` we can turn this class
into argparse arguments to be able to specify them on
the command line.
"""
dataset_name: Optional[str] = field(
default="cifar10", metadata={"help": "Name of a dataset from the datasets package"}
)
dataset_config_name: Optional[str] = field(
default=None, metadata={"help": "The configuration name of the dataset to use (via the datasets library)."}
)
image_column_name: Optional[str] = field(
default=None, metadata={"help": "The column name of the images in the files."}
)
train_dir: Optional[str] = field(default=None, metadata={"help": "A folder containing the training data."})
validation_dir: Optional[str] = field(default=None, metadata={"help": "A folder containing the validation data."})
train_val_split: Optional[float] = field(
default=0.15, metadata={"help": "Percent to split off of train for validation."}
)
max_train_samples: Optional[int] = field(
default=None,
metadata={
"help": "For debugging purposes or quicker training, truncate the number of training examples to this "
"value if set."
},
)
max_eval_samples: Optional[int] = field(
default=None,
metadata={
"help": "For debugging purposes or quicker training, truncate the number of evaluation examples to this "
"value if set."
},
)
def __post_init__(self):
data_files = dict()
if self.train_dir is not None:
data_files["train"] = self.train_dir
if self.validation_dir is not None:
data_files["val"] = self.validation_dir
self.data_files = data_files if data_files else None
@dataclass
class ModelArguments:
"""
Arguments pertaining to which model/config/feature extractor we are going to pre-train.
"""
model_name_or_path: str = field(
default=None,
metadata={
"help": "The model checkpoint for weights initialization."
"Don't set if you want to train a model from scratch."
},
)
config_name: Optional[str] = field(
default=None, metadata={"help": "Pretrained config name or path if not the same as model_name_or_path"}
)
config_overrides: Optional[str] = field(
default=None,
metadata={
"help": "Override some existing default config settings when a model is trained from scratch. Example: "
"n_embd=10,resid_pdrop=0.2,scale_attn_weights=false,summary_type=cls_index"
},
)
cache_dir: Optional[str] = field(
default=None, metadata={"help": "Where do you want to store the pretrained models downloaded from s3"}
)
model_revision: str = field(
default="main",
metadata={"help": "The specific model version to use (can be a branch name, tag name or commit id)."},
)
feature_extractor_name: str = field(default=None, metadata={"help": "Name or path of preprocessor config."})
use_auth_token: bool = field(
default=False,
metadata={
"help": "Will use the token generated when running `transformers-cli login` (necessary to use this script "
"with private models)."
},
)
mask_ratio: float = field(
default=0.75, metadata={"help": "The ratio of the number of masked tokens in the input sequence."}
)
norm_pix_loss: bool = field(
default=True, metadata={"help": "Whether or not to train with normalized pixel values as target."}
)
@dataclass
class CustomTrainingArguments(TrainingArguments):
base_learning_rate: float = field(
default=1e-3, metadata={"help": "Base learning rate: absolute_lr = base_lr * total_batch_size / 256."}
)
def collate_fn(examples):
pixel_values = torch.stack([example["pixel_values"] for example in examples])
return {"pixel_values": pixel_values}
def main():
# See all possible arguments in src/transformers/training_args.py
# or by passing the --help flag to this script.
# We now keep distinct sets of args, for a cleaner separation of concerns.
parser = HfArgumentParser((ModelArguments, DataTrainingArguments, CustomTrainingArguments))
if len(sys.argv) == 2 and sys.argv[1].endswith(".json"):
# If we pass only one argument to the script and it's the path to a json file,
# let's parse it to get our arguments.
model_args, data_args, training_args = parser.parse_json_file(json_file=os.path.abspath(sys.argv[1]))
else:
model_args, data_args, training_args = parser.parse_args_into_dataclasses()
# Setup logging
logging.basicConfig(
format="%(asctime)s - %(levelname)s - %(name)s - %(message)s",
datefmt="%m/%d/%Y %H:%M:%S",
handlers=[logging.StreamHandler(sys.stdout)],
)
log_level = training_args.get_process_log_level()
logger.setLevel(log_level)
transformers.utils.logging.set_verbosity(log_level)
transformers.utils.logging.enable_default_handler()
transformers.utils.logging.enable_explicit_format()
# Log on each process the small summary:
logger.warning(
f"Process rank: {training_args.local_rank}, device: {training_args.device}, n_gpu: {training_args.n_gpu}"
+ f"distributed training: {bool(training_args.local_rank != -1)}, 16-bits training: {training_args.fp16}"
)
logger.info(f"Training/evaluation parameters {training_args}")
# Detecting last checkpoint.
last_checkpoint = None
if os.path.isdir(training_args.output_dir) and training_args.do_train and not training_args.overwrite_output_dir:
last_checkpoint = get_last_checkpoint(training_args.output_dir)
if last_checkpoint is None and len(os.listdir(training_args.output_dir)) > 0:
raise ValueError(
f"Output directory ({training_args.output_dir}) already exists and is not empty. "
"Use --overwrite_output_dir to overcome."
)
elif last_checkpoint is not None and training_args.resume_from_checkpoint is None:
logger.info(
f"Checkpoint detected, resuming training at {last_checkpoint}. To avoid this behavior, change "
"the `--output_dir` or add `--overwrite_output_dir` to train from scratch."
)
# Initialize our dataset.
ds = load_dataset(
data_args.dataset_name,
data_args.dataset_config_name,
data_files=data_args.data_files,
cache_dir=model_args.cache_dir,
)
# If we don't have a validation split, split off a percentage of train as validation.
data_args.train_val_split = None if "validation" in ds.keys() else data_args.train_val_split
if isinstance(data_args.train_val_split, float) and data_args.train_val_split > 0.0:
split = ds["train"].train_test_split(data_args.train_val_split)
ds["train"] = split["train"]
ds["validation"] = split["test"]
# Load pretrained model and feature extractor
#
# Distributed training:
# The .from_pretrained methods guarantee that only one local process can concurrently
# download model & vocab.
config_kwargs = {
"cache_dir": model_args.cache_dir,
"revision": model_args.model_revision,
"use_auth_token": True if model_args.use_auth_token else None,
}
if model_args.config_name:
config = ViTMAEConfig.from_pretrained(model_args.config_name, **config_kwargs)
elif model_args.model_name_or_path:
config = ViTMAEConfig.from_pretrained(model_args.model_name_or_path, **config_kwargs)
else:
config = ViTMAEConfig()
logger.warning("You are instantiating a new config instance from scratch.")
if model_args.config_overrides is not None:
logger.info(f"Overriding config: {model_args.config_overrides}")
config.update_from_string(model_args.config_overrides)
logger.info(f"New config: {config}")
# adapt config
config.update(
{
"mask_ratio": model_args.mask_ratio,
"norm_pix_loss": model_args.norm_pix_loss,
}
)
# create feature extractor
if model_args.feature_extractor_name:
feature_extractor = ViTFeatureExtractor.from_pretrained(model_args.feature_extractor_name, **config_kwargs)
elif model_args.model_name_or_path:
feature_extractor = ViTFeatureExtractor.from_pretrained(model_args.model_name_or_path, **config_kwargs)
else:
feature_extractor = ViTFeatureExtractor()
# create model
if model_args.model_name_or_path:
model = ViTMAEForPreTraining.from_pretrained(
model_args.model_name_or_path,
from_tf=bool(".ckpt" in model_args.model_name_or_path),
config=config,
cache_dir=model_args.cache_dir,
revision=model_args.model_revision,
use_auth_token=True if model_args.use_auth_token else None,
)
else:
logger.info("Training new model from scratch")
model = ViTMAEForPreTraining(config)
if training_args.do_train:
column_names = ds["train"].column_names
else:
column_names = ds["validation"].column_names
if data_args.image_column_name is not None:
image_column_name = data_args.image_column_name
elif "image" in column_names:
image_column_name = "image"
elif "img" in column_names:
image_column_name = "img"
else:
image_column_name = column_names[0]
# transformations as done in original MAE paper
# source: https://github.com/facebookresearch/mae/blob/main/main_pretrain.py
transforms = Compose(
[
Lambda(lambda img: img.convert("RGB") if img.mode != "RGB" else img),
RandomResizedCrop(feature_extractor.size, scale=(0.2, 1.0), interpolation=InterpolationMode.BICUBIC),
RandomHorizontalFlip(),
ToTensor(),
Normalize(mean=feature_extractor.image_mean, std=feature_extractor.image_std),
]
)
def preprocess_images(examples):
"""Preprocess a batch of images by applying transforms."""
examples["pixel_values"] = [transforms(image) for image in examples[image_column_name]]
return examples
if training_args.do_train:
if "train" not in ds:
raise ValueError("--do_train requires a train dataset")
if data_args.max_train_samples is not None:
ds["train"] = ds["train"].shuffle(seed=training_args.seed).select(range(data_args.max_train_samples))
# Set the training transforms
ds["train"].set_transform(preprocess_images)
if training_args.do_eval:
if "validation" not in ds:
raise ValueError("--do_eval requires a validation dataset")
if data_args.max_eval_samples is not None:
ds["validation"] = (
ds["validation"].shuffle(seed=training_args.seed).select(range(data_args.max_eval_samples))
)
# Set the validation transforms
ds["validation"].set_transform(preprocess_images)
# Compute absolute learning rate
total_train_batch_size = (
training_args.train_batch_size * training_args.gradient_accumulation_steps * training_args.world_size
)
if training_args.base_learning_rate is not None:
training_args.learning_rate = training_args.base_learning_rate * total_train_batch_size / 256
# Initialize our trainer
trainer = Trainer(
model=model,
args=training_args,
train_dataset=ds["train"] if training_args.do_train else None,
eval_dataset=ds["validation"] if training_args.do_eval else None,
tokenizer=feature_extractor,
data_collator=collate_fn,
)
# Training
if training_args.do_train:
checkpoint = None
if training_args.resume_from_checkpoint is not None:
checkpoint = training_args.resume_from_checkpoint
elif last_checkpoint is not None:
checkpoint = last_checkpoint
train_result = trainer.train(resume_from_checkpoint=checkpoint)
trainer.save_model()
trainer.log_metrics("train", train_result.metrics)
trainer.save_metrics("train", train_result.metrics)
trainer.save_state()
# Evaluation
if training_args.do_eval:
metrics = trainer.evaluate()
trainer.log_metrics("eval", metrics)
trainer.save_metrics("eval", metrics)
# Write model card and (optionally) push to hub
kwargs = {
"tasks": "masked-auto-encoding",
"dataset": data_args.dataset_name,
"tags": ["masked-auto-encoding"],
}
if training_args.push_to_hub:
trainer.push_to_hub(**kwargs)
else:
trainer.create_model_card(**kwargs)
if __name__ == "__main__":
main()
| 14,724 | 38.690027 | 119 | py |
robust-transformers | robust-transformers-main/examples/pytorch/image-pretraining/run_mim.py | #!/usr/bin/env python
# coding=utf-8
# Copyright 2022 The HuggingFace Inc. team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
import logging
import os
import sys
from dataclasses import dataclass, field
from typing import Optional
import numpy as np
import torch
from datasets import load_dataset
from torchvision.transforms import Compose, Lambda, Normalize, RandomHorizontalFlip, RandomResizedCrop, ToTensor
import transformers
from transformers import (
CONFIG_MAPPING,
FEATURE_EXTRACTOR_MAPPING,
MODEL_FOR_MASKED_IMAGE_MODELING_MAPPING,
AutoConfig,
AutoFeatureExtractor,
AutoModelForMaskedImageModeling,
HfArgumentParser,
Trainer,
TrainingArguments,
)
from transformers.trainer_utils import get_last_checkpoint
from transformers.utils import check_min_version
from transformers.utils.versions import require_version
""" Pre-training a 🤗 Transformers model for simple masked image modeling (SimMIM).
Any model supported by the AutoModelForMaskedImageModeling API can be used.
"""
logger = logging.getLogger(__name__)
# Will error if the minimal version of Transformers is not installed. Remove at your own risks.
check_min_version("4.18.0.dev0")
require_version("datasets>=1.8.0", "To fix: pip install -r examples/pytorch/image-pretraining/requirements.txt")
MODEL_CONFIG_CLASSES = list(MODEL_FOR_MASKED_IMAGE_MODELING_MAPPING.keys())
MODEL_TYPES = tuple(conf.model_type for conf in MODEL_CONFIG_CLASSES)
@dataclass
class DataTrainingArguments:
"""
Arguments pertaining to what data we are going to input our model for training and eval.
Using `HfArgumentParser` we can turn this class into argparse arguments to be able to
specify them on the command line.
"""
dataset_name: Optional[str] = field(
default="cifar10", metadata={"help": "Name of a dataset from the datasets package"}
)
dataset_config_name: Optional[str] = field(
default=None, metadata={"help": "The configuration name of the dataset to use (via the datasets library)."}
)
image_column_name: Optional[str] = field(
default=None,
metadata={"help": "The column name of the images in the files. If not set, will try to use 'image' or 'img'."},
)
train_dir: Optional[str] = field(default=None, metadata={"help": "A folder containing the training data."})
validation_dir: Optional[str] = field(default=None, metadata={"help": "A folder containing the validation data."})
train_val_split: Optional[float] = field(
default=0.15, metadata={"help": "Percent to split off of train for validation."}
)
mask_patch_size: int = field(default=32, metadata={"help": "The size of the square patches to use for masking."})
mask_ratio: float = field(
default=0.6,
metadata={"help": "Percentage of patches to mask."},
)
max_train_samples: Optional[int] = field(
default=None,
metadata={
"help": "For debugging purposes or quicker training, truncate the number of training examples to this "
"value if set."
},
)
max_eval_samples: Optional[int] = field(
default=None,
metadata={
"help": "For debugging purposes or quicker training, truncate the number of evaluation examples to this "
"value if set."
},
)
def __post_init__(self):
data_files = dict()
if self.train_dir is not None:
data_files["train"] = self.train_dir
if self.validation_dir is not None:
data_files["val"] = self.validation_dir
self.data_files = data_files if data_files else None
@dataclass
class ModelArguments:
"""
Arguments pertaining to which model/config/feature extractor we are going to pre-train.
"""
model_name_or_path: str = field(
default=None,
metadata={
"help": "The model checkpoint for weights initialization. Can be a local path to a pytorch_model.bin or a "
"checkpoint identifier on the hub. "
"Don't set if you want to train a model from scratch."
},
)
model_type: Optional[str] = field(
default=None,
metadata={"help": "If training from scratch, pass a model type from the list: " + ", ".join(MODEL_TYPES)},
)
config_name_or_path: Optional[str] = field(
default=None, metadata={"help": "Pretrained config name or path if not the same as model_name"}
)
config_overrides: Optional[str] = field(
default=None,
metadata={
"help": "Override some existing default config settings when a model is trained from scratch. Example: "
"n_embd=10,resid_pdrop=0.2,scale_attn_weights=false,summary_type=cls_index"
},
)
cache_dir: Optional[str] = field(
default=None,
metadata={"help": "Where do you want to store (cache) the pretrained models/datasets downloaded from the hub"},
)
model_revision: str = field(
default="main",
metadata={"help": "The specific model version to use (can be a branch name, tag name or commit id)."},
)
feature_extractor_name: str = field(default=None, metadata={"help": "Name or path of preprocessor config."})
use_auth_token: bool = field(
default=False,
metadata={
"help": "Will use the token generated when running `transformers-cli login` (necessary to use this script "
"with private models)."
},
)
image_size: Optional[int] = field(
default=None,
metadata={
"help": "The size (resolution) of each image. If not specified, will use `image_size` of the configuration."
},
)
patch_size: Optional[int] = field(
default=None,
metadata={
"help": "The size (resolution) of each patch. If not specified, will use `patch_size` of the configuration."
},
)
encoder_stride: Optional[int] = field(
default=None,
metadata={"help": "Stride to use for the encoder."},
)
class MaskGenerator:
"""
A class to generate boolean masks for the pretraining task.
A mask is a 1D tensor of shape (model_patch_size**2,) where the value is either 0 or 1,
where 1 indicates "masked".
"""
def __init__(self, input_size=192, mask_patch_size=32, model_patch_size=4, mask_ratio=0.6):
self.input_size = input_size
self.mask_patch_size = mask_patch_size
self.model_patch_size = model_patch_size
self.mask_ratio = mask_ratio
if self.input_size % self.mask_patch_size != 0:
raise ValueError("Input size must be divisible by mask patch size")
if self.mask_patch_size % self.model_patch_size != 0:
raise ValueError("Mask patch size must be divisible by model patch size")
self.rand_size = self.input_size // self.mask_patch_size
self.scale = self.mask_patch_size // self.model_patch_size
self.token_count = self.rand_size**2
self.mask_count = int(np.ceil(self.token_count * self.mask_ratio))
def __call__(self):
mask_idx = np.random.permutation(self.token_count)[: self.mask_count]
mask = np.zeros(self.token_count, dtype=int)
mask[mask_idx] = 1
mask = mask.reshape((self.rand_size, self.rand_size))
mask = mask.repeat(self.scale, axis=0).repeat(self.scale, axis=1)
return torch.tensor(mask.flatten())
def collate_fn(examples):
pixel_values = torch.stack([example["pixel_values"] for example in examples])
mask = torch.stack([example["mask"] for example in examples])
return {"pixel_values": pixel_values, "bool_masked_pos": mask}
def main():
# See all possible arguments in src/transformers/training_args.py
# or by passing the --help flag to this script.
# We now keep distinct sets of args, for a cleaner separation of concerns.
parser = HfArgumentParser((ModelArguments, DataTrainingArguments, TrainingArguments))
if len(sys.argv) == 2 and sys.argv[1].endswith(".json"):
# If we pass only one argument to the script and it's the path to a json file,
# let's parse it to get our arguments.
model_args, data_args, training_args = parser.parse_json_file(json_file=os.path.abspath(sys.argv[1]))
else:
model_args, data_args, training_args = parser.parse_args_into_dataclasses()
# Setup logging
logging.basicConfig(
format="%(asctime)s - %(levelname)s - %(name)s - %(message)s",
datefmt="%m/%d/%Y %H:%M:%S",
handlers=[logging.StreamHandler(sys.stdout)],
)
log_level = training_args.get_process_log_level()
logger.setLevel(log_level)
transformers.utils.logging.set_verbosity(log_level)
transformers.utils.logging.enable_default_handler()
transformers.utils.logging.enable_explicit_format()
# Log on each process the small summary:
logger.warning(
f"Process rank: {training_args.local_rank}, device: {training_args.device}, n_gpu: {training_args.n_gpu}"
+ f"distributed training: {bool(training_args.local_rank != -1)}, 16-bits training: {training_args.fp16}"
)
logger.info(f"Training/evaluation parameters {training_args}")
# Detecting last checkpoint.
last_checkpoint = None
if os.path.isdir(training_args.output_dir) and training_args.do_train and not training_args.overwrite_output_dir:
last_checkpoint = get_last_checkpoint(training_args.output_dir)
if last_checkpoint is None and len(os.listdir(training_args.output_dir)) > 0:
raise ValueError(
f"Output directory ({training_args.output_dir}) already exists and is not empty. "
"Use --overwrite_output_dir to overcome."
)
elif last_checkpoint is not None and training_args.resume_from_checkpoint is None:
logger.info(
f"Checkpoint detected, resuming training at {last_checkpoint}. To avoid this behavior, change "
"the `--output_dir` or add `--overwrite_output_dir` to train from scratch."
)
# Initialize our dataset.
ds = load_dataset(
data_args.dataset_name,
data_args.dataset_config_name,
data_files=data_args.data_files,
cache_dir=model_args.cache_dir,
)
# If we don't have a validation split, split off a percentage of train as validation.
data_args.train_val_split = None if "validation" in ds.keys() else data_args.train_val_split
if isinstance(data_args.train_val_split, float) and data_args.train_val_split > 0.0:
split = ds["train"].train_test_split(data_args.train_val_split)
ds["train"] = split["train"]
ds["validation"] = split["test"]
# Create config
# Distributed training:
# The .from_pretrained methods guarantee that only one local process can concurrently
# download model & vocab.
config_kwargs = {
"cache_dir": model_args.cache_dir,
"revision": model_args.model_revision,
"use_auth_token": True if model_args.use_auth_token else None,
}
if model_args.config_name_or_path:
config = AutoConfig.from_pretrained(model_args.config_name_or_path, **config_kwargs)
elif model_args.model_name_or_path:
config = AutoConfig.from_pretrained(model_args.model_name_or_path, **config_kwargs)
else:
config = CONFIG_MAPPING[model_args.model_type]()
logger.warning("You are instantiating a new config instance from scratch.")
if model_args.config_overrides is not None:
logger.info(f"Overriding config: {model_args.config_overrides}")
config.update_from_string(model_args.config_overrides)
logger.info(f"New config: {config}")
# make sure the decoder_type is "simmim" (only relevant for BEiT)
if hasattr(config, "decoder_type"):
config.decoder_type = "simmim"
# adapt config
model_args.image_size = model_args.image_size if model_args.image_size is not None else config.image_size
model_args.patch_size = model_args.patch_size if model_args.patch_size is not None else config.patch_size
model_args.encoder_stride = (
model_args.encoder_stride if model_args.encoder_stride is not None else config.encoder_stride
)
config.update(
{
"image_size": model_args.image_size,
"patch_size": model_args.patch_size,
"encoder_stride": model_args.encoder_stride,
}
)
# create feature extractor
if model_args.feature_extractor_name:
feature_extractor = AutoFeatureExtractor.from_pretrained(model_args.feature_extractor_name, **config_kwargs)
elif model_args.model_name_or_path:
feature_extractor = AutoFeatureExtractor.from_pretrained(model_args.model_name_or_path, **config_kwargs)
else:
FEATURE_EXTRACTOR_TYPES = {
conf.model_type: feature_extractor_class
for conf, feature_extractor_class in FEATURE_EXTRACTOR_MAPPING.items()
}
feature_extractor = FEATURE_EXTRACTOR_TYPES[model_args.model_type]()
# create model
if model_args.model_name_or_path:
model = AutoModelForMaskedImageModeling.from_pretrained(
model_args.model_name_or_path,
from_tf=bool(".ckpt" in model_args.model_name_or_path),
config=config,
cache_dir=model_args.cache_dir,
revision=model_args.model_revision,
use_auth_token=True if model_args.use_auth_token else None,
)
else:
logger.info("Training new model from scratch")
model = AutoModelForMaskedImageModeling.from_config(config)
if training_args.do_train:
column_names = ds["train"].column_names
else:
column_names = ds["validation"].column_names
if data_args.image_column_name is not None:
image_column_name = data_args.image_column_name
elif "image" in column_names:
image_column_name = "image"
elif "img" in column_names:
image_column_name = "img"
else:
image_column_name = column_names[0]
# transformations as done in original SimMIM paper
# source: https://github.com/microsoft/SimMIM/blob/main/data/data_simmim.py
transforms = Compose(
[
Lambda(lambda img: img.convert("RGB") if img.mode != "RGB" else img),
RandomResizedCrop(model_args.image_size, scale=(0.67, 1.0), ratio=(3.0 / 4.0, 4.0 / 3.0)),
RandomHorizontalFlip(),
ToTensor(),
Normalize(mean=feature_extractor.image_mean, std=feature_extractor.image_std),
]
)
# create mask generator
mask_generator = MaskGenerator(
input_size=model_args.image_size,
mask_patch_size=data_args.mask_patch_size,
model_patch_size=model_args.patch_size,
mask_ratio=data_args.mask_ratio,
)
def preprocess_images(examples):
"""Preprocess a batch of images by applying transforms + creating a corresponding mask, indicating
which patches to mask."""
examples["pixel_values"] = [transforms(image) for image in examples[image_column_name]]
examples["mask"] = [mask_generator() for i in range(len(examples[image_column_name]))]
return examples
if training_args.do_train:
if "train" not in ds:
raise ValueError("--do_train requires a train dataset")
if data_args.max_train_samples is not None:
ds["train"] = ds["train"].shuffle(seed=training_args.seed).select(range(data_args.max_train_samples))
# Set the training transforms
ds["train"].set_transform(preprocess_images)
if training_args.do_eval:
if "validation" not in ds:
raise ValueError("--do_eval requires a validation dataset")
if data_args.max_eval_samples is not None:
ds["validation"] = (
ds["validation"].shuffle(seed=training_args.seed).select(range(data_args.max_eval_samples))
)
# Set the validation transforms
ds["validation"].set_transform(preprocess_images)
# Initialize our trainer
trainer = Trainer(
model=model,
args=training_args,
train_dataset=ds["train"] if training_args.do_train else None,
eval_dataset=ds["validation"] if training_args.do_eval else None,
tokenizer=feature_extractor,
data_collator=collate_fn,
)
# Training
if training_args.do_train:
checkpoint = None
if training_args.resume_from_checkpoint is not None:
checkpoint = training_args.resume_from_checkpoint
elif last_checkpoint is not None:
checkpoint = last_checkpoint
train_result = trainer.train(resume_from_checkpoint=checkpoint)
trainer.save_model()
trainer.log_metrics("train", train_result.metrics)
trainer.save_metrics("train", train_result.metrics)
trainer.save_state()
# Evaluation
if training_args.do_eval:
metrics = trainer.evaluate()
trainer.log_metrics("eval", metrics)
trainer.save_metrics("eval", metrics)
# Write model card and (optionally) push to hub
kwargs = {
"finetuned_from": model_args.model_name_or_path,
"tasks": "masked-image-modeling",
"dataset": data_args.dataset_name,
"tags": ["masked-image-modeling"],
}
if training_args.push_to_hub:
trainer.push_to_hub(**kwargs)
else:
trainer.create_model_card(**kwargs)
if __name__ == "__main__":
main()
| 18,065 | 39.23608 | 120 | py |
robust-transformers | robust-transformers-main/examples/pytorch/image-classification/run_image_classification_dro.py | #!/usr/bin/env python
# coding=utf-8
# Copyright 2021 The HuggingFace Inc. team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
import logging
import os
import sys
import jsonlines
import json
from dataclasses import dataclass, field
from typing import Optional
import datasets
from datasets.dataset_dict import DatasetDict, IterableDatasetDict
import numpy as np
import torch
from datasets import load_dataset
from PIL import Image
from torchvision.transforms import (
CenterCrop,
Compose,
Normalize,
RandomHorizontalFlip,
RandomResizedCrop,
Resize,
ToTensor,
)
import transformers
from transformers import (
MODEL_FOR_IMAGE_CLASSIFICATION_MAPPING,
AutoConfig,
AutoFeatureExtractor,
AutoModelForImageClassification,
HfArgumentParser,
TrainerDro,
TrainingArguments,
DroArguments,
cartography_data_collator,
set_seed,
)
from transformers.trainer_utils import get_last_checkpoint
from transformers.utils import check_min_version
from transformers.utils.versions import require_version
""" Fine-tuning a 🤗 Transformers model for image classification"""
logger = logging.getLogger(__name__)
# Will error if the minimal version of Transformers is not installed. Remove at your own risks.
check_min_version("4.18.0.dev0")
require_version("datasets>=1.8.0", "To fix: pip install -r examples/pytorch/image-classification/requirements.txt")
MODEL_CONFIG_CLASSES = list(MODEL_FOR_IMAGE_CLASSIFICATION_MAPPING.keys())
MODEL_TYPES = tuple(conf.model_type for conf in MODEL_CONFIG_CLASSES)
def pil_loader(path: str):
with open(path, "rb") as f:
im = Image.open(f)
return im.convert("RGB")
@dataclass
class DataTrainingArguments:
"""
Arguments pertaining to what data we are going to input our model for training and eval.
Using `HfArgumentParser` we can turn this class
into argparse arguments to be able to specify them on
the command line.
"""
task_name: Optional[str] = field(
default=None, metadata={"help": "Name of a dataset from the datasets package"}
)
dataset_name: Optional[str] = field(
default=None, metadata={"help": "Path of a dataset from the datasets package"}
)
dataset_config_name: Optional[str] = field(
default=None, metadata={"help": "The configuration name of the dataset to use (via the datasets library)."}
)
train_dir: Optional[str] = field(default=None, metadata={"help": "A folder containing the training data."})
validation_dir: Optional[str] = field(default=None, metadata={"help": "A folder containing the validation data."})
train_val_split: Optional[float] = field(
default=0.15, metadata={"help": "Percent to split off of train for validation."}
)
max_train_samples: Optional[int] = field(
default=None,
metadata={
"help": "For debugging purposes or quicker training, truncate the number of training examples to this "
"value if set."
},
)
max_eval_samples: Optional[int] = field(
default=None,
metadata={
"help": "For debugging purposes or quicker training, truncate the number of evaluation examples to this "
"value if set."
},
)
k_fold: Optional[int] = field(
default=-1,
metadata={
"help": "Indicate which fold of the training data to use. -1 means use all training data"
},
)
train_metadata_file: Optional[str] = field(
default=None,
metadata={
"help": "Group, and group distribution information (indexed by image id/guid) for train dataset"
},
)
validation_metadata_file: Optional[str] = field(
default=None,
metadata={
"help": "Group, and group distribution information (indexed by image id/guid) for train dataset"
},
)
def __post_init__(self):
data_files = dict()
if self.train_dir is not None:
data_files["train"] = self.train_dir
if self.validation_dir is not None:
data_files["validation"] = self.validation_dir
self.data_files = data_files if data_files else None
@dataclass
class ModelArguments:
"""
Arguments pertaining to which model/config/tokenizer we are going to fine-tune from.
"""
model_name_or_path: str = field(
default="google/vit-base-patch16-224-in21k",
metadata={"help": "Path to pretrained model or model identifier from huggingface.co/models"},
)
model_type: Optional[str] = field(
default=None,
metadata={"help": "If training from scratch, pass a model type from the list: " + ", ".join(MODEL_TYPES)},
)
config_name: Optional[str] = field(
default=None, metadata={"help": "Pretrained config name or path if not the same as model_name"}
)
cache_dir: Optional[str] = field(
default=None, metadata={"help": "Where do you want to store the pretrained models downloaded from s3"}
)
model_revision: str = field(
default="main",
metadata={"help": "The specific model version to use (can be a branch name, tag name or commit id)."},
)
feature_extractor_name: str = field(default=None, metadata={"help": "Name or path of preprocessor config."})
use_auth_token: bool = field(
default=False,
metadata={
"help": "Will use the token generated when running `transformers-cli login` (necessary to use this script "
"with private models)."
},
)
n_slices: int = field(
default=9,
metadata={
"help": "Number of group assignments to learn."
}
)
n_features: int = field(
default=772,
metadata={
"help": "Number of group assignments to learn."
}
)
entropy_reg: float = field(
default=0.0,
metadata={
"help": "Use Entropy Regularizer"
}
)
marginal_reg: float = field(
default=0.0,
metadata={
"help": "Use Entropy Regularizer"
}
)
def collate_fn(examples):
pixel_values = torch.stack([example["pixel_values"] for example in examples])
labels = torch.tensor([example["labels"] for example in examples])
groups = torch.tensor([example["group"] for example in examples])
instance_weights = torch.tensor([example.get("instance_weight", 1.0) for example in examples])
group_distribution = torch.stack([torch.tensor(example["group_distribution"]) for example in examples])
guids = [example["guid"] for example in examples]
return {"pixel_values": pixel_values, "labels": labels, "instance_weight": instance_weights, "guid": guids, "group" : groups, "group_distribution": group_distribution}
def main():
# See all possible arguments in src/transformers/training_args.py
# or by passing the --help flag to this script.
# We now keep distinct sets of args, for a cleaner separation of concerns.
parser = HfArgumentParser((ModelArguments, DataTrainingArguments, TrainingArguments, DroArguments))
if len(sys.argv) == 2 and sys.argv[1].endswith(".json"):
# If we pass only one argument to the script and it's the path to a json file,
# let's parse it to get our arguments.
model_args, data_args, training_args, dro_args = parser.parse_json_file(json_file=os.path.abspath(sys.argv[1]))
else:
model_args, data_args, training_args, dro_args = parser.parse_args_into_dataclasses()
# Setup logging
logging.basicConfig(
format="%(asctime)s - %(levelname)s - %(name)s - %(message)s",
datefmt="%m/%d/%Y %H:%M:%S",
handlers=[logging.StreamHandler(sys.stdout)],
)
log_level = training_args.get_process_log_level()
logger.setLevel(log_level)
transformers.utils.logging.set_verbosity(log_level)
transformers.utils.logging.enable_default_handler()
transformers.utils.logging.enable_explicit_format()
# Log on each process the small summary:
logger.warning(
f"Process rank: {training_args.local_rank}, device: {training_args.device}, n_gpu: {training_args.n_gpu}"
+ f"distributed training: {bool(training_args.local_rank != -1)}, 16-bits training: {training_args.fp16}"
)
logger.info(f"Training/evaluation parameters {training_args}")
# Detecting last checkpoint.
last_checkpoint = None
if os.path.isdir(training_args.output_dir) and training_args.do_train and not training_args.overwrite_output_dir:
last_checkpoint = get_last_checkpoint(training_args.output_dir)
if last_checkpoint is None and len(os.listdir(training_args.output_dir)) > 0:
raise ValueError(
f"Output directory ({training_args.output_dir}) already exists and is not empty. "
"Use --overwrite_output_dir to overcome."
)
elif last_checkpoint is not None and training_args.resume_from_checkpoint is None:
logger.info(
f"Checkpoint detected, resuming training at {last_checkpoint}. To avoid this behavior, change "
"the `--output_dir` or add `--overwrite_output_dir` to train from scratch."
)
# Initialize our dataset and prepare it for the 'image-classification' task.
task = data_args.task_name
ds = load_dataset(
path=data_args.dataset_name,
# "imagefolder",
#data_args.dataset_config_name,
data_files=data_args.data_files,
cache_dir=model_args.cache_dir,
task="image-classification",
)
# If we don't have a validation split, split off a percentage of train as validation.
data_args.train_val_split = None if "validation" in ds.keys() else data_args.train_val_split
if isinstance(data_args.train_val_split, float) and data_args.train_val_split > 0.0:
split = ds["train"].train_test_split(data_args.train_val_split)
ds["train"] = split["train"]
ds["validation"] = split["test"]
# Prepare label mappings.
# We'll include these in the model's config to get human readable labels in the Inference API.
is_regression = ds["train"].features["labels"].dtype in ["float32", "float64"]
labels = ds["train"].features["labels"].names
label2id, id2label = dict(), dict()
for i, label in enumerate(labels):
label2id[label] = str(i)
id2label[str(i)] = label
# if doing k fold validation, then train and validation are obtained from splits in train itself.
if data_args.k_fold>=0:
# Shuffle training data (but order should be same for all kfold experiments)
ds["train"] = ds["train"].shuffle(seed=666, load_from_cache_file=False)
K = 5 # TODO: fixing number of folds to 5 (change this later)
split_size = int(len(ds["train"])/K)
validation_indices = np.arange(data_args.k_fold*split_size, (data_args.k_fold+1)*split_size)
train_indices = np.asarray(list(set([ex for ex in range(0, len(ds["train"]))]) - set([ex for ex in validation_indices])))
train_split = ds["train"].select(indices=train_indices)
test_split = ds["train"].select(indices=validation_indices)
ds = DatasetDict({"train": train_split, "validation": test_split})
# Load the accuracy metric from the datasets package
metric = datasets.load_metric("accuracy")
# Define our compute_metrics function. It takes an `EvalPrediction` object (a namedtuple with a
# predictions and label_ids field) and has to return a dictionary string to float.
def compute_metrics(p):
"""Computes accuracy on a batch of predictions"""
return metric.compute(predictions=np.argmax(p.predictions, axis=1), references=p.label_ids)
config = AutoConfig.from_pretrained(
model_args.config_name or model_args.model_name_or_path,
num_labels=len(labels),
label2id=label2id,
id2label=id2label,
finetuning_task="image-classification",
cache_dir=model_args.cache_dir,
revision=model_args.model_revision,
use_auth_token=True if model_args.use_auth_token else None,
)
model = AutoModelForImageClassification.from_pretrained(
model_args.model_name_or_path,
from_tf=bool(".ckpt" in model_args.model_name_or_path),
config=config,
cache_dir=model_args.cache_dir,
revision=model_args.model_revision,
use_auth_token=True if model_args.use_auth_token else None,
ignore_mismatched_sizes=True, # Adding this argument because most pretrained Image classifiers on ImageNet have hardcoded 1000 classes.
)
feature_extractor = AutoFeatureExtractor.from_pretrained(
model_args.feature_extractor_name or model_args.model_name_or_path,
cache_dir=model_args.cache_dir,
revision=model_args.model_revision,
use_auth_token=True if model_args.use_auth_token else None,
)
# Define torchvision transforms to be applied to each image.
normalize = Normalize(mean=feature_extractor.image_mean, std=feature_extractor.image_std)
_train_transforms = Compose(
[
RandomResizedCrop(feature_extractor.size),
RandomHorizontalFlip(),
ToTensor(),
normalize,
]
)
_val_transforms = Compose(
[
Resize(feature_extractor.size),
CenterCrop(feature_extractor.size),
ToTensor(),
normalize,
]
)
# ds["train"][0]['image'].filename to get groups
train_guid_array = []
for ex in ds["train"]:
filename = ex["image"].filename
image_id = filename.split("/")[-1]
train_guid_array.append(image_id)
validation_guid_array = []
for ex in ds["validation"]:
filename = ex["image"].filename
image_id = filename.split("/")[-1]
validation_guid_array.append(image_id)
# get group information to send to trainer_dro.
train_metadata = json.loads(open(data_args.train_metadata_file).read())
validation_metadata = json.loads(open(data_args.validation_metadata_file).read())
# get group, group_distribution id indexed by guid
ds["train"] = ds["train"].add_column("guid", train_guid_array)
train_groups = [train_metadata[guid]["group"] for guid in train_guid_array]
ds["train"] = ds["train"].add_column("group", train_groups)
ds["train"] = ds["train"].add_column("group_distribution", [train_metadata[guid]["group_distribution"] for guid in train_guid_array])
ds["validation"] = ds["validation"].add_column("guid", validation_guid_array)
validation_groups = [validation_metadata[guid]["group"] for guid in validation_guid_array]
ds["validation"] = ds["validation"].add_column("group", validation_groups)
ds["validation"] = ds["validation"].add_column("group_distribution", [validation_metadata[guid]["group_distribution"] for guid in validation_guid_array])
def train_transforms(example_batch):
"""Apply _train_transforms across a batch."""
example_batch["pixel_values"] = [
_train_transforms(pil_img.convert("RGB")) for pil_img in example_batch["image"]
]
return example_batch
def val_transforms(example_batch):
"""Apply _val_transforms across a batch."""
example_batch["pixel_values"] = [_val_transforms(pil_img.convert("RGB")) for pil_img in example_batch["image"]]
return example_batch
if training_args.do_train:
if "train" not in ds:
raise ValueError("--do_train requires a train dataset")
if data_args.max_train_samples is not None:
ds["train"] = ds["train"].shuffle(seed=training_args.seed).select(range(data_args.max_train_samples))
# Set the training transforms
ds["train"].set_transform(train_transforms)
if training_args.do_eval:
if "validation" not in ds:
raise ValueError("--do_eval requires a validation dataset")
if data_args.max_eval_samples is not None:
ds["validation"] = (
ds["validation"].shuffle(seed=training_args.seed).select(range(data_args.max_eval_samples))
)
# Set the validation transforms
ds["validation"].set_transform(val_transforms)
if dro_args.is_robust: # and training_args.do_train:
unique_groups, group_counts = np.unique(train_groups, return_counts=True)
dro_args.n_groups = len(unique_groups)
dro_args.group_counts = torch.LongTensor(group_counts)
if dro_args.reweight_groups: # and training_args.do_train:
# For ERM models, you need group_counts for weighted sampling.
unique_groups, group_counts = np.unique(train_groups, return_counts=True)
dro_args.n_groups = len(unique_groups)
dro_args.group_counts = torch.LongTensor(group_counts)
# Initalize our trainer
trainer = TrainerDro(
model=model,
args=training_args,
dro_args=dro_args,
train_dataset=ds["train"] if training_args.do_train else None,
eval_dataset=ds["validation"] if training_args.do_eval else None,
compute_metrics=compute_metrics,
tokenizer=feature_extractor,
data_collator=collate_fn,
)
# Training
if training_args.do_train:
checkpoint = None
if training_args.resume_from_checkpoint is not None:
checkpoint = training_args.resume_from_checkpoint
elif last_checkpoint is not None:
checkpoint = last_checkpoint
train_result = trainer.train(resume_from_checkpoint=checkpoint)
trainer.save_model()
trainer.log_metrics("train", train_result.metrics)
trainer.save_metrics("train", train_result.metrics)
trainer.save_state()
# Evaluation
if training_args.do_eval:
logger.info("*** Evaluate ***")
metrics = trainer.evaluate()
trainer.log_metrics("eval", metrics)
trainer.save_metrics("eval", metrics)
if training_args.do_predict:
logger.info("*** Predict ***")
# Removing the `label` columns because it contains -1 and Trainer won't like that.
predict_dataset = ds["validation"]
# predict_dataset = predict_dataset.remove_columns("labels")
predictions = trainer.predict(predict_dataset, metric_key_prefix="predict").predictions
predictions = np.squeeze(predictions) if is_regression else np.argmax(predictions, axis=1)
output_predict_file = os.path.join(training_args.output_dir, f"predict_results_{task}.txt")
if trainer.is_world_process_zero():
with open(output_predict_file, "w") as writer:
logger.info(f"***** Predict results {task} *****")
writer.write("index\timage_id\tprediction\n")
for index, (guid, item) in enumerate(zip(validation_guid_array, predictions)):
if is_regression:
writer.write(f"{index}\t{guid}\t{item:3.3f}\n")
else:
item = labels[item]
writer.write(f"{index}\t{guid}\t{item}\n")
# Write model card and (optionally) push to hub
kwargs = {
"finetuned_from": model_args.model_name_or_path,
"tasks": "image-classification",
"dataset": data_args.dataset_name,
"tags": ["image-classification"],
}
if training_args.push_to_hub:
trainer.push_to_hub(**kwargs)
else:
trainer.create_model_card(**kwargs)
if __name__ == "__main__":
main()
| 20,092 | 39.756592 | 171 | py |
robust-transformers | robust-transformers-main/examples/pytorch/image-classification/run_image_classification.py | #!/usr/bin/env python
# coding=utf-8
# Copyright 2021 The HuggingFace Inc. team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
import logging
import os
import sys
from dataclasses import dataclass, field
from typing import Optional
import datasets
from datasets.dataset_dict import DatasetDict, IterableDatasetDict
import numpy as np
import torch
from datasets import load_dataset
from PIL import Image
from torchvision.transforms import (
CenterCrop,
Compose,
Normalize,
RandomHorizontalFlip,
RandomResizedCrop,
Resize,
ToTensor,
)
import transformers
from transformers import (
MODEL_FOR_IMAGE_CLASSIFICATION_MAPPING,
AutoConfig,
AutoFeatureExtractor,
AutoModelForImageClassification,
HfArgumentParser,
Trainer,
TrainingArguments,
)
from transformers.trainer_utils import get_last_checkpoint
from transformers.utils import check_min_version
from transformers.utils.versions import require_version
""" Fine-tuning a 🤗 Transformers model for image classification"""
logger = logging.getLogger(__name__)
# Will error if the minimal version of Transformers is not installed. Remove at your own risks.
check_min_version("4.18.0.dev0")
require_version("datasets>=1.8.0", "To fix: pip install -r examples/pytorch/image-classification/requirements.txt")
MODEL_CONFIG_CLASSES = list(MODEL_FOR_IMAGE_CLASSIFICATION_MAPPING.keys())
MODEL_TYPES = tuple(conf.model_type for conf in MODEL_CONFIG_CLASSES)
def pil_loader(path: str):
with open(path, "rb") as f:
im = Image.open(f)
return im.convert("RGB")
@dataclass
class DataTrainingArguments:
"""
Arguments pertaining to what data we are going to input our model for training and eval.
Using `HfArgumentParser` we can turn this class
into argparse arguments to be able to specify them on
the command line.
"""
task_name: Optional[str] = field(
default=None, metadata={"help": "Name of a dataset from the datasets package"}
)
dataset_name: Optional[str] = field(
default=None, metadata={"help": "Path of a dataset from the datasets package"}
)
dataset_config_name: Optional[str] = field(
default=None, metadata={"help": "The configuration name of the dataset to use (via the datasets library)."}
)
train_dir: Optional[str] = field(default=None, metadata={"help": "A folder containing the training data."})
validation_dir: Optional[str] = field(default=None, metadata={"help": "A folder containing the validation data."})
train_val_split: Optional[float] = field(
default=0.15, metadata={"help": "Percent to split off of train for validation."}
)
max_train_samples: Optional[int] = field(
default=None,
metadata={
"help": "For debugging purposes or quicker training, truncate the number of training examples to this "
"value if set."
},
)
max_eval_samples: Optional[int] = field(
default=None,
metadata={
"help": "For debugging purposes or quicker training, truncate the number of evaluation examples to this "
"value if set."
},
)
k_fold: Optional[int] = field(
default=-1,
metadata={
"help": "Indicate which fold of the training data to use. -1 means use all training data"
},
)
def __post_init__(self):
data_files = dict()
if self.train_dir is not None:
data_files["train"] = self.train_dir
if self.validation_dir is not None:
data_files["validation"] = self.validation_dir
self.data_files = data_files if data_files else None
@dataclass
class ModelArguments:
"""
Arguments pertaining to which model/config/tokenizer we are going to fine-tune from.
"""
model_name_or_path: str = field(
default="google/vit-base-patch16-224-in21k",
metadata={"help": "Path to pretrained model or model identifier from huggingface.co/models"},
)
model_type: Optional[str] = field(
default=None,
metadata={"help": "If training from scratch, pass a model type from the list: " + ", ".join(MODEL_TYPES)},
)
config_name: Optional[str] = field(
default=None, metadata={"help": "Pretrained config name or path if not the same as model_name"}
)
cache_dir: Optional[str] = field(
default=None, metadata={"help": "Where do you want to store the pretrained models downloaded from s3"}
)
model_revision: str = field(
default="main",
metadata={"help": "The specific model version to use (can be a branch name, tag name or commit id)."},
)
feature_extractor_name: str = field(default=None, metadata={"help": "Name or path of preprocessor config."})
use_auth_token: bool = field(
default=False,
metadata={
"help": "Will use the token generated when running `transformers-cli login` (necessary to use this script "
"with private models)."
},
)
n_slices: int = field(
default=9,
metadata={
"help": "Number of group assignments to learn."
}
)
n_features: int = field(
default=772,
metadata={
"help": "Number of group assignments to learn."
}
)
entropy_reg: float = field(
default=0.0,
metadata={
"help": "Use Entropy Regularizer"
}
)
marginal_reg: float = field(
default=0.0,
metadata={
"help": "Use Entropy Regularizer"
}
)
def collate_fn(examples):
pixel_values = torch.stack([example["pixel_values"] for example in examples])
labels = torch.tensor([example["labels"] for example in examples])
return {"pixel_values": pixel_values, "labels": labels}
def main():
# See all possible arguments in src/transformers/training_args.py
# or by passing the --help flag to this script.
# We now keep distinct sets of args, for a cleaner separation of concerns.
parser = HfArgumentParser((ModelArguments, DataTrainingArguments, TrainingArguments))
if len(sys.argv) == 2 and sys.argv[1].endswith(".json"):
# If we pass only one argument to the script and it's the path to a json file,
# let's parse it to get our arguments.
model_args, data_args, training_args = parser.parse_json_file(json_file=os.path.abspath(sys.argv[1]))
else:
model_args, data_args, training_args = parser.parse_args_into_dataclasses()
# Setup logging
logging.basicConfig(
format="%(asctime)s - %(levelname)s - %(name)s - %(message)s",
datefmt="%m/%d/%Y %H:%M:%S",
handlers=[logging.StreamHandler(sys.stdout)],
)
log_level = training_args.get_process_log_level()
logger.setLevel(log_level)
transformers.utils.logging.set_verbosity(log_level)
transformers.utils.logging.enable_default_handler()
transformers.utils.logging.enable_explicit_format()
# Log on each process the small summary:
logger.warning(
f"Process rank: {training_args.local_rank}, device: {training_args.device}, n_gpu: {training_args.n_gpu}"
+ f"distributed training: {bool(training_args.local_rank != -1)}, 16-bits training: {training_args.fp16}"
)
logger.info(f"Training/evaluation parameters {training_args}")
# Detecting last checkpoint.
last_checkpoint = None
if os.path.isdir(training_args.output_dir) and training_args.do_train and not training_args.overwrite_output_dir:
last_checkpoint = get_last_checkpoint(training_args.output_dir)
if last_checkpoint is None and len(os.listdir(training_args.output_dir)) > 0:
raise ValueError(
f"Output directory ({training_args.output_dir}) already exists and is not empty. "
"Use --overwrite_output_dir to overcome."
)
elif last_checkpoint is not None and training_args.resume_from_checkpoint is None:
logger.info(
f"Checkpoint detected, resuming training at {last_checkpoint}. To avoid this behavior, change "
"the `--output_dir` or add `--overwrite_output_dir` to train from scratch."
)
# Initialize our dataset and prepare it for the 'image-classification' task.
task = data_args.task_name
ds = load_dataset(
path=data_args.dataset_name,
# "imagefolder",
#data_args.dataset_config_name,
data_files=data_args.data_files,
cache_dir=model_args.cache_dir,
task="image-classification",
)
# If we don't have a validation split, split off a percentage of train as validation.
data_args.train_val_split = None if "validation" in ds.keys() else data_args.train_val_split
if isinstance(data_args.train_val_split, float) and data_args.train_val_split > 0.0:
split = ds["train"].train_test_split(data_args.train_val_split)
ds["train"] = split["train"]
ds["validation"] = split["test"]
# Prepare label mappings.
# We'll include these in the model's config to get human readable labels in the Inference API.
is_regression = ds["train"].features["labels"].dtype in ["float32", "float64"]
labels = ds["train"].features["labels"].names
label2id, id2label = dict(), dict()
for i, label in enumerate(labels):
label2id[label] = str(i)
id2label[str(i)] = label
# explicitly find guid from image id (filename) and and add it as a column to the training and validation data.
# if doing k fold validation, then train and validation are obtained from splits in train itself.
if data_args.k_fold>=0:
# Shuffle training data (but order should be same for all kfold experiments)
ds["train"] = ds["train"].shuffle(seed=666, load_from_cache_file=False)
K = 5 # TODO: fixing number of folds to 5 (change this later)
split_size = int(len(ds["train"])/K)
validation_indices = np.arange(data_args.k_fold*split_size, (data_args.k_fold+1)*split_size)
train_indices = np.asarray(list(set([ex for ex in range(0, len(ds["train"]))]) - set([ex for ex in validation_indices])))
train_split = ds["train"].select(indices=train_indices)
test_split = ds["train"].select(indices=validation_indices)
ds = DatasetDict({"train": train_split, "validation": test_split})
# Load the accuracy metric from the datasets package
metric = datasets.load_metric("accuracy")
# Define our compute_metrics function. It takes an `EvalPrediction` object (a namedtuple with a
# predictions and label_ids field) and has to return a dictionary string to float.
def compute_metrics(p):
"""Computes accuracy on a batch of predictions"""
return metric.compute(predictions=np.argmax(p.predictions, axis=1), references=p.label_ids)
config = AutoConfig.from_pretrained(
model_args.config_name or model_args.model_name_or_path,
num_labels=len(labels),
label2id=label2id,
id2label=id2label,
finetuning_task="image-classification",
cache_dir=model_args.cache_dir,
revision=model_args.model_revision,
use_auth_token=True if model_args.use_auth_token else None,
)
model = AutoModelForImageClassification.from_pretrained(
model_args.model_name_or_path,
from_tf=bool(".ckpt" in model_args.model_name_or_path),
config=config,
cache_dir=model_args.cache_dir,
revision=model_args.model_revision,
use_auth_token=True if model_args.use_auth_token else None,
ignore_mismatched_sizes=True, # Adding this argument because most pretrained Image classifiers on ImageNet have hardcoded 1000 classes.
)
feature_extractor = AutoFeatureExtractor.from_pretrained(
model_args.feature_extractor_name or model_args.model_name_or_path,
cache_dir=model_args.cache_dir,
revision=model_args.model_revision,
use_auth_token=True if model_args.use_auth_token else None,
)
# Define torchvision transforms to be applied to each image.
normalize = Normalize(mean=feature_extractor.image_mean, std=feature_extractor.image_std)
_train_transforms = Compose(
[
RandomResizedCrop(feature_extractor.size),
RandomHorizontalFlip(),
ToTensor(),
normalize,
]
)
_val_transforms = Compose(
[
Resize(feature_extractor.size),
CenterCrop(feature_extractor.size),
ToTensor(),
normalize,
]
)
def train_transforms(example_batch):
"""Apply _train_transforms across a batch."""
example_batch["pixel_values"] = [
_train_transforms(pil_img.convert("RGB")) for pil_img in example_batch["image"]
]
return example_batch
def val_transforms(example_batch):
"""Apply _val_transforms across a batch."""
example_batch["pixel_values"] = [_val_transforms(pil_img.convert("RGB")) for pil_img in example_batch["image"]]
return example_batch
if training_args.do_train:
if "train" not in ds:
raise ValueError("--do_train requires a train dataset")
if data_args.max_train_samples is not None:
ds["train"] = ds["train"].shuffle(seed=training_args.seed).select(range(data_args.max_train_samples))
# Set the training transforms
ds["train"].set_transform(train_transforms)
if training_args.do_eval:
if "validation" not in ds:
raise ValueError("--do_eval requires a validation dataset")
if data_args.max_eval_samples is not None:
ds["validation"] = (
ds["validation"].shuffle(seed=training_args.seed).select(range(data_args.max_eval_samples))
)
# Set the validation transforms
ds["validation"].set_transform(val_transforms)
# ds["train"][0]['image'].filename to get groups
train_guid_array = []
for ex in ds["train"]:
filename = ex["image"].filename
image_id = filename.split("/")[-1]
train_guid_array.append(image_id)
validation_guid_array = []
for ex in ds["validation"]:
filename = ex["image"].filename
image_id = filename.split("/")[-1]
validation_guid_array.append(image_id)
# Initalize our trainer
trainer = Trainer(
model=model,
args=training_args,
train_dataset=ds["train"] if training_args.do_train else None,
eval_dataset=ds["validation"] if training_args.do_eval else None,
compute_metrics=compute_metrics,
tokenizer=feature_extractor,
data_collator=collate_fn,
)
# Training
if training_args.do_train:
checkpoint = None
if training_args.resume_from_checkpoint is not None:
checkpoint = training_args.resume_from_checkpoint
elif last_checkpoint is not None:
checkpoint = last_checkpoint
train_result = trainer.train(resume_from_checkpoint=checkpoint)
trainer.save_model()
trainer.log_metrics("train", train_result.metrics)
trainer.save_metrics("train", train_result.metrics)
trainer.save_state()
# Evaluation
if training_args.do_eval:
logger.info("*** Evaluate ***")
metrics = trainer.evaluate()
trainer.log_metrics("eval", metrics)
trainer.save_metrics("eval", metrics)
if training_args.do_predict:
logger.info("*** Predict ***")
# Removing the `label` columns because it contains -1 and Trainer won't like that.
predict_dataset = ds["validation"]
# predict_dataset = predict_dataset.remove_columns("labels")
predictions = trainer.predict(predict_dataset, metric_key_prefix="predict").predictions
predictions = np.squeeze(predictions) if is_regression else np.argmax(predictions, axis=1)
output_predict_file = os.path.join(training_args.output_dir, f"predict_results_{task}.txt")
if trainer.is_world_process_zero():
with open(output_predict_file, "w") as writer:
logger.info(f"***** Predict results {task} *****")
writer.write("index\timage_id\tprediction\n")
for index, (guid, item) in enumerate(zip(validation_guid_array, predictions)):
if is_regression:
writer.write(f"{index}\t{guid}\t{item:3.3f}\n")
else:
item = labels[item]
writer.write(f"{index}\t{guid}\t{item}\n")
# Write model card and (optionally) push to hub
kwargs = {
"finetuned_from": model_args.model_name_or_path,
"tasks": "image-classification",
"dataset": data_args.dataset_name,
"tags": ["image-classification"],
}
if training_args.push_to_hub:
trainer.push_to_hub(**kwargs)
else:
trainer.create_model_card(**kwargs)
if __name__ == "__main__":
main()
| 17,554 | 38.449438 | 143 | py |
robust-transformers | robust-transformers-main/examples/pytorch/image-classification/generate_features.py | #!/usr/bin/env python
# coding=utf-8
# generating features for image classification
import logging
import os
import sys
import jsonlines
import json
from dataclasses import dataclass, field
from typing import Optional
import tqdm
import pickle
import datasets
from datasets.dataset_dict import DatasetDict, IterableDatasetDict
import numpy as np
import meerkat as mk
import pandas as pd
import torch
from datasets import load_dataset
from PIL import Image
from torchvision.transforms import (
CenterCrop,
Compose,
Normalize,
RandomHorizontalFlip,
RandomResizedCrop,
Resize,
ToTensor,
)
import transformers
from transformers import (
MODEL_FOR_IMAGE_CLASSIFICATION_MAPPING,
AutoConfig,
AutoFeatureExtractor,
AutoModelForImageClassification,
HfArgumentParser,
TrainerDro,
TrainingArguments,
DroArguments,
cartography_data_collator,
set_seed,
)
from transformers.trainer_utils import get_last_checkpoint
from transformers.trainer_pt_utils import nested_numpify, nested_detach
from transformers.utils import check_min_version
from transformers.utils.versions import require_version
from domino_slicer import DominoMixture, DominoSlicer
""" Fine-tuning a 🤗 Transformers model for image classification"""
logger = logging.getLogger(__name__)
# Will error if the minimal version of Transformers is not installed. Remove at your own risks.
check_min_version("4.18.0.dev0")
require_version("datasets>=1.8.0", "To fix: pip install -r examples/pytorch/image-classification/requirements.txt")
MODEL_CONFIG_CLASSES = list(MODEL_FOR_IMAGE_CLASSIFICATION_MAPPING.keys())
MODEL_TYPES = tuple(conf.model_type for conf in MODEL_CONFIG_CLASSES)
def pil_loader(path: str):
with open(path, "rb") as f:
im = Image.open(f)
return im.convert("RGB")
@dataclass
class DataTrainingArguments:
"""
Arguments pertaining to what data we are going to input our model for training and eval.
Using `HfArgumentParser` we can turn this class
into argparse arguments to be able to specify them on
the command line.
"""
task_name: Optional[str] = field(
default=None, metadata={"help": "Name of a dataset from the datasets package"}
)
dataset_name: Optional[str] = field(
default=None, metadata={"help": "Path of a dataset from the datasets package"}
)
dataset_config_name: Optional[str] = field(
default=None, metadata={"help": "The configuration name of the dataset to use (via the datasets library)."}
)
train_dir: Optional[str] = field(default=None, metadata={"help": "A folder containing the training data."})
validation_dir: Optional[str] = field(default=None, metadata={"help": "A folder containing the validation data."})
y_log_likelihood_weight: float = field(
default=1.0,
metadata={"help": "Weight on reference class label (Y) of domino slicer."}
)
y_hat_log_likelihood_weight: float = field(
default=1.0,
metadata={"help": "Weight on predicted class label (Y hat) of domino slicer."}
)
cluster_assgn_file: str = field(
default=None,
metadata={"help": "Path to error-aware cluster assignment file."}
)
output_file: str = field(
default=None,
metadata={"help": "output file to store newly re-grouped data."}
)
train_val_split: Optional[float] = field(
default=0.15, metadata={"help": "Percent to split off of train for validation."}
)
max_train_samples: Optional[int] = field(
default=None,
metadata={
"help": "For debugging purposes or quicker training, truncate the number of training examples to this "
"value if set."
},
)
max_eval_samples: Optional[int] = field(
default=None,
metadata={
"help": "For debugging purposes or quicker training, truncate the number of evaluation examples to this "
"value if set."
},
)
k_fold: Optional[int] = field(
default=-1,
metadata={
"help": "Indicate which fold of the training data to use. -1 means use all training data"
},
)
num_folds: Optional[int] = field(
default=5,
metadata={
"help": "Indicate which fold of the training data to use. -1 means use all training data"
},
)
train_metadata_file: Optional[str] = field(
default=None,
metadata={
"help": "Group, and group distribution information (indexed by image id/guid) for train dataset"
},
)
validation_metadata_file: Optional[str] = field(
default=None,
metadata={
"help": "Group, and group distribution information (indexed by image id/guid) for train dataset"
},
)
create_features: Optional[bool] = field(
default=False, metadata={"help": "Create training and evaluation data features."}
)
cluster_train_features: Optional[bool] = field(
default=False, metadata={"help": "Cluster training and evaluation data features."}
)
cluster_dev_features: Optional[bool] = field(
default=False, metadata={"help": "Cluster training and evaluation data features."}
)
assign_train_groups: Optional[bool] = field(
default=False, metadata={"help": "Greedily Assign groups based on DOMINO membership."}
)
assign_dev_groups: Optional[bool] = field(
default=False, metadata={"help": "Greedily Assign groups based on DOMINO membership."}
)
n_slices: Optional[int] = field(default=10, metadata={"help": "number of error slices to analyze."})
n_mixture_components: Optional[int] = field(default=50, metadata={"help": "number of mixture components."})
init_type: Optional[str] = field(default="confusion", metadata={"help": "Type of initialization for Mixture model."})
include_ypred: Optional[bool] = field(
default=False, metadata={"help": "Included predicted class for train time filtering"}
)
train_metadata_file: Optional[str] = field(
default=None,
metadata={
"help": "Group, and group distribution information (indexed by image id/guid) for train dataset"
},
)
validation_metadata_file: Optional[str] = field(
default=None,
metadata={
"help": "Group, and group distribution information (indexed by image id/guid) for train dataset"
},
)
def __post_init__(self):
data_files = dict()
if self.train_dir is not None:
data_files["train"] = self.train_dir
if self.validation_dir is not None:
data_files["validation"] = self.validation_dir
self.data_files = data_files if data_files else None
@dataclass
class ModelArguments:
"""
Arguments pertaining to which model/config/tokenizer we are going to fine-tune from.
"""
model_name_or_path: str = field(
default="google/vit-base-patch16-224-in21k",
metadata={"help": "Path to Trained model or model identifier from huggingface.co/models"},
)
pretrained_model_name_or_path: str = field(
default="google/vit-base-patch16-224-in21k",
metadata={"help": "Path to Pretrained model."},
)
kfold_model_path_prefix: Optional[str] = field(
default=None,
metadata={"help": "Path to pretrained model or model identifier from huggingface.co/models"},
)
model_type: Optional[str] = field(
default=None,
metadata={"help": "If training from scratch, pass a model type from the list: " + ", ".join(MODEL_TYPES)},
)
config_name: Optional[str] = field(
default=None, metadata={"help": "Pretrained config name or path if not the same as model_name"}
)
cache_dir: Optional[str] = field(
default=None, metadata={"help": "Where do you want to store the pretrained models downloaded from s3"}
)
model_revision: str = field(
default="main",
metadata={"help": "The specific model version to use (can be a branch name, tag name or commit id)."},
)
feature_extractor_name: str = field(default=None, metadata={"help": "Name or path of preprocessor config."})
use_auth_token: bool = field(
default=False,
metadata={
"help": "Will use the token generated when running `transformers-cli login` (necessary to use this script "
"with private models)."
},
)
def collate_fn(examples):
pixel_values = torch.stack([example["pixel_values"] for example in examples])
labels = torch.tensor([example["labels"] for example in examples])
groups = torch.tensor([example["group"] for example in examples])
group_distribution = torch.stack([torch.tensor(example["group_distribution"]) for example in examples])
guids = [example["guid"] for example in examples]
return {"pixel_values": pixel_values, "labels": labels, "guid": guids, "group" : groups, "group_distribution": group_distribution}
# (model_args, training_args, trainer, train_dataloader, model, config, split="train")
def create_features(model_args, training_args, trainer, dataloader, model, config, split, is_pretraining=False):
total_train_batch_size = training_args.train_batch_size * training_args.gradient_accumulation_steps * training_args.world_size
num_examples = len(dataloader) # Number of batches.
logger.info("***** Running feature generation for training dataset *****")
logger.info(f" Num examples = {num_examples}")
logger.info(f" Instantaneous batch size per device = {training_args.per_device_train_batch_size}")
logger.info(f" Total train batch size (w. parallel, distributed & accumulation) = {total_train_batch_size}")
train_representations = np.array([], dtype='float32').reshape(0,model.config.hidden_size)
mean_train_representations = np.array([], dtype='float32').reshape(0,model.config.hidden_size)
all_contextual_representations = []
train_logits = np.array([], dtype='float32').reshape(0, config.num_labels)
train_labels = np.array([], dtype='float32').reshape(0)
train_guids = []
train_lengths = []
train_groups = np.array([], dtype='float32').reshape(0)
## creat a meerkat table.
for step, inputs in tqdm.tqdm(enumerate(dataloader)):
inputs = trainer._prepare_inputs(inputs)
with torch.no_grad():
with trainer.autocast_smart_context_manager():
#TODO: Remove non-tensorizable elements from inputs.
"""
guid = inputs["guid"]
group = inputs["group"]
labels = inputs["labels"]
train_guids += guid
train_labels = np.concatenate((train_labels, nested_numpify(labels)), axis=0)
train_groups = np.concatenate((train_groups, nested_numpify(group)), axis=0)
del inputs["guid"]
del inputs["group"]
if "group_distribution" in inputs:
del inputs["group_distribution"]
"""
inputs["output_hidden_states"] = True
guid, group, group_distribution, labels = [inputs.pop(key) for key in ['guid', 'group', 'group_distribution', 'labels']]
train_guids += guid
train_labels = np.concatenate((train_labels, nested_numpify(labels)), axis=0)
train_groups = np.concatenate((train_groups, nested_numpify(group)), axis=0)
outputs = model(**inputs)
"""
for batch_index, seq_length in enumerate(inputs["attention_mask"].sum(1)):
stacked_output = torch.vstack([outputs["hidden_states"][i][batch_index, :, :].unsqueeze(0) for i in range(model.config.num_hidden_layers + 1)]).cpu().numpy()
all_contextual_representations.append(stacked_output)
train_lengths.append(seq_length)
"""
last_hidden_layer = outputs["hidden_states"][-1]
classifier_representations = last_hidden_layer[:,0,:]
train_representations = np.concatenate((train_representations, nested_numpify(classifier_representations)), axis=0)
logits = outputs['logits']
train_logits = np.concatenate((train_logits, nested_numpify(logits)), axis=0)
# Record predicted class as well.
if is_pretraining:
dp = mk.DataPanel({
'guid': train_guids,
'emb': train_representations})
else:
dp = mk.DataPanel({
'guid': train_guids,
'group': train_groups,
'emb': train_representations,
# 'mean_pooled': mean_train_representations,
'target': train_labels,
'pred_probs': train_logits,
# 'all_hidden_states': all_contextual_representations,
# 'sequence_lengths': train_lengths
})
pd_df = mk.DataPanel.to_pandas(dp)
clustering_cache = os.path.join(training_args.output_dir, "clustering")
if not os.path.exists(clustering_cache):
os.mkdir(clustering_cache)
if not is_pretraining:
pd_df.to_pickle(os.path.join(training_args.output_dir, "clustering", "{0}.pkl".format(split)))
else:
pd_df.to_pickle(os.path.join(training_args.output_dir, "clustering", "{0}_pretrained.pkl".format(split)))
def main():
# See all possible arguments in src/transformers/training_args.py
# or by passing the --help flag to this script.
# We now keep distinct sets of args, for a cleaner separation of concerns.
parser = HfArgumentParser((ModelArguments, DataTrainingArguments, TrainingArguments, DroArguments))
model_args, data_args, training_args, dro_args = parser.parse_args_into_dataclasses()
# Setup logging
logging.basicConfig(
format="%(asctime)s - %(levelname)s - %(name)s - %(message)s",
datefmt="%m/%d/%Y %H:%M:%S",
handlers=[logging.StreamHandler(sys.stdout)],
)
log_level = training_args.get_process_log_level()
logger.setLevel(log_level)
transformers.utils.logging.set_verbosity(log_level)
transformers.utils.logging.enable_default_handler()
transformers.utils.logging.enable_explicit_format()
# Log on each process the small summary:
logger.warning(
f"Process rank: {training_args.local_rank}, device: {training_args.device}, n_gpu: {training_args.n_gpu}"
+ f"distributed training: {bool(training_args.local_rank != -1)}, 16-bits training: {training_args.fp16}"
)
logger.info(f"Training/evaluation parameters {training_args}")
# Initialize our dataset and prepare it for the 'image-classification' task.
task = data_args.task_name
ds = load_dataset(
path=data_args.dataset_name,
# "imagefolder",
#data_args.dataset_config_name,
data_files=data_args.data_files,
cache_dir=model_args.cache_dir,
task="image-classification",
)
is_regression = ds["train"].features["labels"].dtype in ["float32", "float64"]
labels = ds["train"].features["labels"].names
label2id, id2label = dict(), dict()
for i, label in enumerate(labels):
label2id[label] = str(i)
id2label[str(i)] = label
# Load the accuracy metric from the datasets package
metric = datasets.load_metric("accuracy")
# Define our compute_metrics function. It takes an `EvalPrediction` object (a namedtuple with a
# predictions and label_ids field) and has to return a dictionary string to float.
def compute_metrics(p):
"""Computes accuracy on a batch of predictions"""
return metric.compute(predictions=np.argmax(p.predictions, axis=1), references=p.label_ids)
config = AutoConfig.from_pretrained(
model_args.config_name or model_args.model_name_or_path,
num_labels=len(labels),
label2id=label2id,
id2label=id2label,
finetuning_task="image-classification",
cache_dir=model_args.cache_dir,
revision=model_args.model_revision,
use_auth_token=True if model_args.use_auth_token else None,
)
model = AutoModelForImageClassification.from_pretrained(
model_args.model_name_or_path,
from_tf=bool(".ckpt" in model_args.model_name_or_path),
config=config,
cache_dir=model_args.cache_dir,
revision=model_args.model_revision,
use_auth_token=True if model_args.use_auth_token else None,
)
feature_extractor = AutoFeatureExtractor.from_pretrained(
model_args.feature_extractor_name or model_args.model_name_or_path,
cache_dir=model_args.cache_dir,
revision=model_args.model_revision,
use_auth_token=True if model_args.use_auth_token else None,
)
# Pretrained model for feature generation
pretrained_model = AutoModelForImageClassification.from_pretrained(
model_args.pretrained_model_name_or_path,
from_tf=bool(".ckpt" in model_args.model_name_or_path),
config=config,
cache_dir=model_args.cache_dir,
revision=model_args.model_revision,
use_auth_token=True if model_args.use_auth_token else None,
)
# Define torchvision transforms to be applied to each image.
normalize = Normalize(mean=feature_extractor.image_mean, std=feature_extractor.image_std)
_train_transforms = Compose(
[
RandomResizedCrop(feature_extractor.size),
RandomHorizontalFlip(),
ToTensor(),
normalize,
]
)
_val_transforms = Compose(
[
Resize(feature_extractor.size),
CenterCrop(feature_extractor.size),
ToTensor(),
normalize,
]
)
train_guid_array = []
for ex in ds["train"]:
filename = ex["image"].filename
image_id = filename.split("/")[-1]
train_guid_array.append(image_id)
validation_guid_array = []
for ex in ds["validation"]:
filename = ex["image"].filename
image_id = filename.split("/")[-1]
validation_guid_array.append(image_id)
# get group information to send to trainer_dro.
train_metadata = json.loads(open(data_args.train_metadata_file).read())
validation_metadata = json.loads(open(data_args.validation_metadata_file).read())
# get group, group_distribution id indexed by guid
ds["train"] = ds["train"].add_column("guid", train_guid_array)
train_groups = [train_metadata[guid]["group"] for guid in train_guid_array]
ds["train"] = ds["train"].add_column("group", train_groups)
ds["train"] = ds["train"].add_column("group_distribution", [train_metadata[guid]["group_distribution"] for guid in train_guid_array])
ds["validation"] = ds["validation"].add_column("guid", validation_guid_array)
validation_groups = [validation_metadata[guid]["group"] for guid in validation_guid_array]
ds["validation"] = ds["validation"].add_column("group", validation_groups)
ds["validation"] = ds["validation"].add_column("group_distribution", [validation_metadata[guid]["group_distribution"] for guid in validation_guid_array])
# if doing k fold validation, then train and validation are obtained from splits in train itself.
if data_args.k_fold>=0:
# Shuffle training data (but order should be same for all kfold experiments)
ds["train"] = ds["train"].shuffle(seed=666, load_from_cache_file=False)
K = 5 # TODO: fixing number of folds to 5 (change this later)
split_size = int(len(ds["train"])/K)
validation_indices = np.arange(data_args.k_fold*split_size, (data_args.k_fold+1)*split_size)
train_indices = np.asarray(list(set([ex for ex in range(0, len(ds["train"]))]) - set([ex for ex in validation_indices])))
train_split = ds["train"].select(indices=train_indices)
test_split = ds["train"].select(indices=validation_indices)
ds = DatasetDict({"train": train_split, "validation": test_split})
def train_transforms(example_batch):
"""Apply _train_transforms across a batch."""
example_batch["pixel_values"] = [
_train_transforms(pil_img.convert("RGB")) for pil_img in example_batch["image"]
]
return example_batch
def val_transforms(example_batch):
"""Apply _val_transforms across a batch."""
example_batch["pixel_values"] = [_val_transforms(pil_img.convert("RGB")) for pil_img in example_batch["image"]]
return example_batch
if data_args.create_features:
# Set train and validation transforms.
ds["train"].set_transform(train_transforms)
ds["validation"].set_transform(val_transforms)
trainer = TrainerDro(
model=model,
args=training_args,
dro_args=dro_args,
train_dataset=ds["train"] ,
eval_dataset=ds["validation"] ,
compute_metrics=compute_metrics,
tokenizer=feature_extractor,
data_collator=collate_fn,
)
train_dataloader = trainer.get_train_dataloader()
eval_dataloader = trainer.get_eval_dataloader(ds["validation"])
create_features(model_args, training_args, trainer, train_dataloader, model, config, split="train")
create_features(model_args, training_args, trainer, eval_dataloader, model, config, split="dev")
trainer = TrainerDro(
model=pretrained_model,
args=training_args,
dro_args=dro_args,
train_dataset=ds["train"] ,
eval_dataset=ds["validation"] ,
compute_metrics=compute_metrics,
tokenizer=feature_extractor,
data_collator=collate_fn,
)
train_dataloader = trainer.get_train_dataloader()
eval_dataloader = trainer.get_eval_dataloader(ds["validation"])
create_features(model_args, training_args, trainer, train_dataloader, pretrained_model, config, split="train", is_pretraining=True)
create_features(model_args, training_args, trainer, eval_dataloader, pretrained_model, config, split="dev", is_pretraining=True)
if data_args.cluster_dev_features:
split = "dev"
logger.info("***** Loading features for {0} dataset *****".format(split))
pd_df = pd.read_pickle(os.path.join(training_args.output_dir, "clustering", "{0}.pkl".format(split)))
logits = np.stack(pd_df["pred_probs"].to_numpy())
dp = mk.DataPanel({
'guid': pd_df["guid"].to_list(),
'group': np.stack(pd_df["group"].to_numpy()),
'emb': np.stack(pd_df["emb"].to_numpy()),
'target': np.stack(pd_df["target"].to_numpy()),
'pred_probs': np.asarray(torch.softmax(torch.tensor(logits), dim=-1))
})
domino = DominoSlicer(n_slices=data_args.n_slices, n_mixture_components=data_args.n_mixture_components, init_params=data_args.init_type, max_iter=200)
domino.fit(
data=dp, embeddings="emb", targets="target", pred_probs="pred_probs"
)
# Save the domino class as a pickle
pickle.dump(domino, open(os.path.join(training_args.output_dir, "clustering", "{0}_dominoclass_{1}_slices.pkl".format(split, data_args.n_slices)), "wb"))
dp["domino_slices"] = domino.transform(
data=dp, embeddings="emb", targets="target", pred_probs="pred_probs"
)
# also load pretrained features in the dataframe
pretrained_dp = pd.read_pickle(os.path.join(training_args.output_dir, "clustering", "{0}_pretrained.pkl".format(split)))
# make meerkat dataset
pretrained_dp = mk.DataPanel({
'guid': pretrained_dp["guid"].to_list(),
'pretrained_emb': np.stack(pretrained_dp["emb"].to_numpy()),
})
# Merge pretrained_comb_dp and comb_dp along guid column
merged_dp = dp.merge(pretrained_dp, on="guid")
# Save the domino object so that it be used to draw comparisons.
pd_df = mk.DataPanel.to_pandas(merged_dp)
logger.info("***** Dumping group assingments for {0} to file *****".format(split))
pd_df.to_pickle(os.path.join(training_args.output_dir, "clustering", "{0}_output_{1}_slices.pkl".format(split, data_args.n_slices)))
logger.info("***** Dumping groups for exploration for {0} to file *****".format(split))
data_dict = {}
slices_dict = {i:[] for i in range(-1, data_args.n_slices)}
if split == "dev":
for ex in ds["validation"]:
data_dict[ex["guid"]] = ex
elif split == "train":
for ex in ds["train"]:
data_dict[ex["guid"]] = ex
for i in range(len(pd_df)):
## Usually analysis is done with group assignment only if value is above a threshold.
slice = int(np.argmax(pd_df.iloc[i]["domino_slices"]))
slice_val = np.max(pd_df.iloc[i]["domino_slices"])
if slice_val > 0.90:
chosen_slice = slice
else:
chosen_slice = -1
guid = pd_df.iloc[i]["guid"]
ex = data_dict[guid]
ex["prediction"] = id2label[str(np.argmax(pd_df.iloc[i]["pred_probs"]))]
# Only look at slices that are actually erroneous
# if not np.argmax(pd_df.iloc[i]["pred_probs"]) == pd_df.iloc[i]["target"]:
slices_dict[chosen_slice].append(ex)
"""
with open(os.path.join(training_args.output_dir, "clustering", "{0}_analysis_{1}_slices.json".format(split, data_args.n_slices)), "w") as fout:
# ignore all examples that were assigned slice -1
for i in range(data_args.n_slices):
for j, ex in enumerate(slices_dict[i]):
new_ex = {"slice": i, "label": ex["label"], "predicted": ex["prediction"], "guid": ex["guid"]}
fout.write(json.dumps(new_ex) + "\n")
"""
if data_args.cluster_train_features:
split = "dev"
# Get json datasets from all split files of the training set.
# Load training, validation and test data from file paths.
kfold_model_prefix = model_args.kfold_model_path_prefix
model_folders = [f"{kfold_model_prefix}{split_no}" for split_no in range(0, data_args.num_folds)]
fold_dps = []
for fold_no, model_path in enumerate(model_folders):
fold_pd_df = pd.read_pickle(os.path.join(model_path, "clustering", "{0}.pkl".format(split)))
fold_logits = np.stack(fold_pd_df["pred_probs"].to_numpy())
fold_dps.append(mk.DataPanel({
'guid': fold_pd_df["guid"].to_list(),
'group': np.stack(fold_pd_df["group"].to_numpy()),
'emb': np.stack(fold_pd_df["emb"].to_numpy()),
'target': np.stack(fold_pd_df["target"].to_numpy()),
'pred_probs': np.asarray(torch.softmax(torch.tensor(fold_logits), dim=-1))
}))
comb_dp = mk.concat(fold_dps)
# y_hat_log_likelihood_weight may have to be up-played when slices are fewer and far between.
domino = DominoSlicer(n_slices=data_args.n_slices,
n_mixture_components=data_args.n_mixture_components,
init_params=data_args.init_type,
y_log_likelihood_weight=data_args.y_log_likelihood_weight,
y_hat_log_likelihood_weight=data_args.y_hat_log_likelihood_weight,
max_iter=200)
domino.fit(
data=comb_dp, embeddings="emb", targets="target", pred_probs="pred_probs"
)
# Save the domino class as a pickle
pickle.dump(domino, open(os.path.join(training_args.output_dir, "clustering", "error_aware_dominoclass_{0}_slices.pkl".format(data_args.n_slices)), "wb"))
comb_dp["domino_slices"] = domino.transform(
data=comb_dp, embeddings="emb", targets="target", pred_probs="pred_probs"
)
# also load pretrained features in the dataframe
pretrained_fold_dps = []
for fold_no, model_path in enumerate(model_folders):
fold_pd_df = pd.read_pickle(os.path.join(model_path, "clustering", "{0}_pretrained.pkl".format(split)))
pretrained_fold_dps.append(mk.DataPanel({
'guid': fold_pd_df["guid"].to_list(),
'pretrained_emb': np.stack(fold_pd_df["emb"].to_numpy()),
}))
pretrained_comb_dp = mk.concat(pretrained_fold_dps)
# Merge pretrained_comb_dp and comb_dp along guid column
merged_dp = comb_dp.merge(pretrained_comb_dp, on="guid")
pd_df = mk.DataPanel.to_pandas(merged_dp)
logger.info("***** Dumping group assingments for {0} to file *****".format(split))
pd_df.to_pickle(os.path.join(training_args.output_dir, "clustering", "error_aware_output_{0}_slices.pkl".format(data_args.n_slices)))
if data_args.assign_train_groups:
pd_df = pd.read_pickle(data_args.cluster_assgn_file)
slices = np.stack(pd_df["domino_slices"].to_numpy())
group_assignment = {}
group_distributions = {}
for i in range(len(pd_df)):
## Usually analysis is done with group assignment only if value is above a threshold.
slice = int(np.argmax(pd_df.iloc[i]["domino_slices"]))
slice_val = np.max(pd_df.iloc[i]["domino_slices"])
chosen_slice = slice
guid = pd_df.iloc[i]["guid"]
group_distributions[guid] = list(pd_df.iloc[i]["domino_slices"])
group_assignment[guid] = chosen_slice
slicing_metadata_directory = os.path.join(data_args.dataset_name, "automatic_slicing")
if not os.path.exists(slicing_metadata_directory):
os.mkdir(slicing_metadata_directory)
output_file = os.path.join(slicing_metadata_directory, data_args.output_file)
with open(output_file, "w") as fout:
guid_indexed_dict = {}
for ex in ds["train"]:
guid = ex["guid"]
group = group_assignment[guid]
group_distribution=[0]*data_args.n_slices
group_distribution[group] = 1
dict_ = {"guid":guid, "group":group, "group_distribution":group_distribution}
guid_indexed_dict[guid] = dict_
fout.write(json.dumps(guid_indexed_dict))
if __name__ == "__main__":
main()
| 30,464 | 42.771552 | 177 | py |
robust-transformers | robust-transformers-main/examples/pytorch/image-classification/learn_grouper.py | #!/usr/bin/env python
# coding=utf-8
# Copyright 2021 The HuggingFace Inc. team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
import logging
import os
import sys
from xml import dom
import jsonlines
import json
from dataclasses import dataclass, field
from typing import Optional
import datasets
from torch.utils.data import Dataset
from datasets.dataset_dict import DatasetDict, IterableDatasetDict
import numpy as np
import pandas as pd
import torch
from collections import OrderedDict
from datasets import load_dataset
from PIL import Image
from torchvision.transforms import (
CenterCrop,
Compose,
Normalize,
RandomHorizontalFlip,
RandomResizedCrop,
Resize,
ToTensor,
)
import transformers
from transformers import (
MODEL_FOR_IMAGE_CLASSIFICATION_MAPPING,
AutoConfig,
AutoFeatureExtractor,
AutoModelForImageClassification,
HfArgumentParser,
TrainerSlicer,
TrainingArguments,
DroArguments,
DominoTrainingArguments,
cartography_data_collator,
set_seed,
)
from transformers.trainer_utils import get_last_checkpoint
from transformers.utils import check_min_version
from transformers.utils.versions import require_version
from domino_learnt_slicer import DominoSlicer
""" Fine-tuning a 🤗 Transformers model for image classification"""
logger = logging.getLogger(__name__)
# Will error if the minimal version of Transformers is not installed. Remove at your own risks.
check_min_version("4.18.0.dev0")
require_version("datasets>=1.8.0", "To fix: pip install -r examples/pytorch/image-classification/requirements.txt")
MODEL_CONFIG_CLASSES = list(MODEL_FOR_IMAGE_CLASSIFICATION_MAPPING.keys())
MODEL_TYPES = tuple(conf.model_type for conf in MODEL_CONFIG_CLASSES)
def pil_loader(path: str):
with open(path, "rb") as f:
im = Image.open(f)
return im.convert("RGB")
@dataclass
class DataTrainingArguments:
"""
Arguments pertaining to what data we are going to input our model for training and eval.
Using `HfArgumentParser` we can turn this class
into argparse arguments to be able to specify them on
the command line.
"""
task_name: Optional[str] = field(
default=None, metadata={"help": "Name of a dataset from the datasets package"}
)
dataset_name: Optional[str] = field(
default=None, metadata={"help": "Path of a dataset from the datasets package"}
)
dataset_config_name: Optional[str] = field(
default=None, metadata={"help": "The configuration name of the dataset to use (via the datasets library)."}
)
train_dir: Optional[str] = field(default=None, metadata={"help": "A folder containing the training data."})
validation_dir: Optional[str] = field(default=None, metadata={"help": "A folder containing the validation data."})
train_val_split: Optional[float] = field(
default=0.15, metadata={"help": "Percent to split off of train for validation."}
)
max_train_samples: Optional[int] = field(
default=None,
metadata={
"help": "For debugging purposes or quicker training, truncate the number of training examples to this "
"value if set."
},
)
max_eval_samples: Optional[int] = field(
default=None,
metadata={
"help": "For debugging purposes or quicker training, truncate the number of evaluation examples to this "
"value if set."
},
)
k_fold: Optional[int] = field(
default=-1,
metadata={
"help": "Indicate which fold of the training data to use. -1 means use all training data"
},
)
train_metadata_file: Optional[str] = field(
default=None,
metadata={
"help": "Group, and group distribution information (indexed by image id/guid) for train dataset"
},
)
validation_metadata_file: Optional[str] = field(
default=None,
metadata={
"help": "Group, and group distribution information (indexed by image id/guid) for train dataset"
},
)
train_feature_file: Optional[str] = field(
default=None, metadata={"help": "A a Meerkat dataframe consisting of train features for group membership.."}
)
validation_feature_file: Optional[str] = field(
default=None, metadata={"help": "A a Meerkat dataframe consisting of validation features for group membership."}
)
def __post_init__(self):
data_files = dict()
if self.train_dir is not None:
data_files["train"] = self.train_dir
if self.validation_dir is not None:
data_files["validation"] = self.validation_dir
self.data_files = data_files if data_files else None
@dataclass
class ModelArguments:
"""
Arguments pertaining to which model/config/tokenizer we are going to fine-tune from.
"""
model_name_or_path: str = field(
default="google/vit-base-patch16-224-in21k",
metadata={"help": "Path to pretrained model or model identifier from huggingface.co/models"},
)
adversary_model_name_or_path: Optional[str] = field(
default=None, metadata={"help": "Path to pretrained adversary model"}
)
model_type: Optional[str] = field(
default=None,
metadata={"help": "If training from scratch, pass a model type from the list: " + ", ".join(MODEL_TYPES)},
)
config_name: Optional[str] = field(
default=None, metadata={"help": "Pretrained config name or path if not the same as model_name"}
)
cache_dir: Optional[str] = field(
default=None, metadata={"help": "Where do you want to store the pretrained models downloaded from s3"}
)
model_revision: str = field(
default="main",
metadata={"help": "The specific model version to use (can be a branch name, tag name or commit id)."},
)
feature_extractor_name: str = field(default=None, metadata={"help": "Name or path of preprocessor config."})
use_auth_token: bool = field(
default=False,
metadata={
"help": "Will use the token generated when running `transformers-cli login` (necessary to use this script "
"with private models)."
},
)
n_slices: int = field(
default=9,
metadata={
"help": "Number of group assignments to learn."
}
)
n_features: int = field(
default=772,
metadata={
"help": "Number of group assignments to learn."
}
)
entropy_reg: float = field(
default=0.0,
metadata={
"help": "Use Entropy Regularizer"
}
)
marginal_reg: float = field(
default=0.0,
metadata={
"help": "Use Entropy Regularizer"
}
)
def collate_fn(examples):
pixel_values = torch.stack([example["pixel_values"] for example in examples])
labels = torch.tensor([example["labels"] for example in examples])
groups = torch.tensor([example["group"] for example in examples])
instance_weights = torch.tensor([example.get("instance_weight", 1.0) for example in examples])
group_distribution = torch.stack([torch.tensor(example["group_distribution"]) for example in examples])
group_features = torch.stack([torch.tensor(example["group_features"]) for example in examples])
guids = [example["guid"] for example in examples]
return {"pixel_values": pixel_values, "group" : groups, "group_features": group_features, "labels": labels, "instance_weight": instance_weights, "guid": guids, "group_distribution": group_distribution}
def main():
# See all possible arguments in src/transformers/training_args.py
# or by passing the --help flag to this script.
# We now keep distinct sets of args, for a cleaner separation of concerns.
parser = HfArgumentParser((ModelArguments, DataTrainingArguments, DominoTrainingArguments, DroArguments))
if len(sys.argv) == 2 and sys.argv[1].endswith(".json"):
# If we pass only one argument to the script and it's the path to a json file,
# let's parse it to get our arguments.
model_args, data_args, training_args, dro_args = parser.parse_json_file(json_file=os.path.abspath(sys.argv[1]))
else:
model_args, data_args, training_args, dro_args = parser.parse_args_into_dataclasses()
# Setup logging
logging.basicConfig(
format="%(asctime)s - %(levelname)s - %(name)s - %(message)s",
datefmt="%m/%d/%Y %H:%M:%S",
handlers=[logging.StreamHandler(sys.stdout)],
)
log_level = training_args.get_process_log_level()
logger.setLevel(log_level)
transformers.utils.logging.set_verbosity(log_level)
transformers.utils.logging.enable_default_handler()
transformers.utils.logging.enable_explicit_format()
# Log on each process the small summary:
logger.warning(
f"Process rank: {training_args.local_rank}, device: {training_args.device}, n_gpu: {training_args.n_gpu}"
+ f"distributed training: {bool(training_args.local_rank != -1)}, 16-bits training: {training_args.fp16}"
)
logger.info(f"Training/evaluation parameters {training_args}")
# Detecting last checkpoint.
last_checkpoint = None
if os.path.isdir(training_args.output_dir) and training_args.do_train and not training_args.overwrite_output_dir:
last_checkpoint = get_last_checkpoint(training_args.output_dir)
if last_checkpoint is None and len(os.listdir(training_args.output_dir)) > 0:
raise ValueError(
f"Output directory ({training_args.output_dir}) already exists and is not empty. "
"Use --overwrite_output_dir to overcome."
)
elif last_checkpoint is not None and training_args.resume_from_checkpoint is None:
logger.info(
f"Checkpoint detected, resuming training at {last_checkpoint}. To avoid this behavior, change "
"the `--output_dir` or add `--overwrite_output_dir` to train from scratch."
)
# Initialize our dataset and prepare it for the 'image-classification' task.
task = data_args.task_name
ds = load_dataset(
path=data_args.dataset_name,
# "imagefolder",
#data_args.dataset_config_name,
data_files=data_args.data_files,
cache_dir=model_args.cache_dir,
task="image-classification",
)
# If we don't have a validation split, split off a percentage of train as validation.
data_args.train_val_split = None if "validation" in ds.keys() else data_args.train_val_split
if isinstance(data_args.train_val_split, float) and data_args.train_val_split > 0.0:
split = ds["train"].train_test_split(data_args.train_val_split)
ds["train"] = split["train"]
ds["validation"] = split["test"]
# Prepare label mappings.
# We'll include these in the model's config to get human readable labels in the Inference API.
is_regression = ds["train"].features["labels"].dtype in ["float32", "float64"]
labels = ds["train"].features["labels"].names
label2id, id2label = dict(), dict()
for i, label in enumerate(labels):
label2id[label] = str(i)
id2label[str(i)] = label
# if doing k fold validation, then train and validation are obtained from splits in train itself.
if data_args.k_fold>=0:
# Shuffle training data (but order should be same for all kfold experiments)
ds["train"] = ds["train"].shuffle(seed=666, load_from_cache_file=False)
K = 5 # TODO: fixing number of folds to 5 (change this later)
split_size = int(len(ds["train"])/K)
validation_indices = np.arange(data_args.k_fold*split_size, (data_args.k_fold+1)*split_size)
train_indices = np.asarray(list(set([ex for ex in range(0, len(ds["train"]))]) - set([ex for ex in validation_indices])))
train_split = ds["train"].select(indices=train_indices)
test_split = ds["train"].select(indices=validation_indices)
ds = DatasetDict({"train": train_split, "validation": test_split})
# Load the accuracy metric from the datasets package
metric = datasets.load_metric("accuracy")
# Define our compute_metrics function. It takes an `EvalPrediction` object (a namedtuple with a
# predictions and label_ids field) and has to return a dictionary string to float.
def compute_metrics(p):
"""Computes accuracy on a batch of predictions"""
return metric.compute(predictions=np.argmax(p.predictions, axis=1), references=p.label_ids)
config = AutoConfig.from_pretrained(
model_args.config_name or model_args.model_name_or_path,
num_labels=len(labels),
label2id=label2id,
id2label=id2label,
finetuning_task="image-classification",
cache_dir=model_args.cache_dir,
revision=model_args.model_revision,
use_auth_token=True if model_args.use_auth_token else None,
)
model = AutoModelForImageClassification.from_pretrained(
model_args.model_name_or_path,
from_tf=bool(".ckpt" in model_args.model_name_or_path),
config=config,
cache_dir=model_args.cache_dir,
revision=model_args.model_revision,
use_auth_token=True if model_args.use_auth_token else None,
ignore_mismatched_sizes=True, # Adding this argument because most pretrained Image classifiers on ImageNet have hardcoded 1000 classes.
)
feature_extractor = AutoFeatureExtractor.from_pretrained(
model_args.feature_extractor_name or model_args.model_name_or_path,
cache_dir=model_args.cache_dir,
revision=model_args.model_revision,
use_auth_token=True if model_args.use_auth_token else None,
)
# Define torchvision transforms to be applied to each image.
normalize = Normalize(mean=feature_extractor.image_mean, std=feature_extractor.image_std)
_train_transforms = Compose(
[
RandomResizedCrop(feature_extractor.size),
RandomHorizontalFlip(),
ToTensor(),
normalize,
]
)
_val_transforms = Compose(
[
Resize(feature_extractor.size),
CenterCrop(feature_extractor.size),
ToTensor(),
normalize,
]
)
# ds["train"][0]['image'].filename to get groups
train_guid_array = []
for ex in ds["train"]:
filename = ex["image"].filename
image_id = filename.split("/")[-1]
train_guid_array.append(image_id)
validation_guid_array = []
for ex in ds["validation"]:
filename = ex["image"].filename
image_id = filename.split("/")[-1]
validation_guid_array.append(image_id)
# get group information to send to trainer_dro.
train_metadata = json.loads(open(data_args.train_metadata_file).read())
validation_metadata = json.loads(open(data_args.validation_metadata_file).read())
# get group, group_distribution id indexed by guid
# Load external feature files
train_features = json.loads(open(data_args.train_feature_file).read())
eval_features = json.loads(open(data_args.validation_feature_file).read())
ds["train"] = ds["train"].add_column("guid", train_guid_array)
train_groups = [train_metadata[guid]["group"] for guid in train_guid_array]
ds["train"] = ds["train"].add_column("group", train_groups)
ds["train"] = ds["train"].add_column("group_distribution", [train_metadata[guid]["group_distribution"] for guid in train_guid_array])
ds["train"] = ds["train"].add_column("group_features", [train_features[guid] for guid in train_guid_array])
ds["validation"] = ds["validation"].add_column("guid", validation_guid_array)
validation_groups = [validation_metadata[guid]["group"] for guid in validation_guid_array]
ds["validation"] = ds["validation"].add_column("group", validation_groups)
ds["validation"] = ds["validation"].add_column("group_distribution", [validation_metadata[guid]["group_distribution"] for guid in validation_guid_array])
ds["validation"] = ds["validation"].add_column("group_features", [eval_features[guid] for guid in validation_guid_array])
# group_features
def train_transforms(example_batch):
"""Apply _train_transforms across a batch."""
example_batch["pixel_values"] = [
_train_transforms(pil_img.convert("RGB")) for pil_img in example_batch["image"]
]
return example_batch
def val_transforms(example_batch):
"""Apply _val_transforms across a batch."""
example_batch["pixel_values"] = [_val_transforms(pil_img.convert("RGB")) for pil_img in example_batch["image"]]
return example_batch
if training_args.do_train:
if "train" not in ds:
raise ValueError("--do_train requires a train dataset")
if data_args.max_train_samples is not None:
ds["train"] = ds["train"].shuffle(seed=training_args.seed).select(range(data_args.max_train_samples))
# Set the training transforms
ds["train"].set_transform(train_transforms)
if training_args.do_eval:
if "validation" not in ds:
raise ValueError("--do_eval requires a validation dataset")
if data_args.max_eval_samples is not None:
ds["validation"] = (
ds["validation"].shuffle(seed=training_args.seed).select(range(data_args.max_eval_samples))
)
# Set the validation transforms
ds["validation"].set_transform(val_transforms)
if dro_args.is_robust and training_args.do_train:
unique_groups, group_counts = np.unique(train_groups, return_counts=True)
dro_args.n_groups = len(unique_groups)
dro_args.group_counts = torch.LongTensor(group_counts)
if dro_args.reweight_groups and training_args.do_train:
# For ERM models, you need group_counts for weighted sampling.
unique_groups, group_counts = np.unique(train_groups, return_counts=True)
dro_args.n_groups = len(unique_groups)
dro_args.group_counts = torch.LongTensor(group_counts)
# Declare model for group prediction, which is enveloped in a Learned DOMINO model
domino_model = DominoSlicer(model_args, training_args, dro_args, model)
# load a pretrained adversarial grouper model
if model_args.adversary_model_name_or_path:
state_dict = torch.load(model_args.adversary_model_name_or_path , map_location="cpu")
state_dict_new = OrderedDict({k.replace("grouper_model.", ""):v for k,v in state_dict.items()})
domino_model.grouper_model.load_state_dict(state_dict_new)
# When grouper model is already trained(ie. model_name_or_path is a directory with a grouper model, initialize with it)
if os.path.exists(model_args.model_name_or_path) and os.path.exists(os.path.join(model_args.model_name_or_path, "grouper")):
state_dict = torch.load(os.path.join(model_args.model_name_or_path, "grouper", "pytorch_model.bin") , map_location="cpu")
state_dict_new = OrderedDict({k.replace("grouper_model.", ""):v for k,v in state_dict.items()})
domino_model.grouper_model.load_state_dict(state_dict_new)
# Initalize our trainer
trainer = TrainerSlicer(
model=domino_model,
args=training_args,
dro_args=dro_args,
train_dataset=ds["train"] if training_args.do_train else None,
eval_dataset=ds["validation"] if training_args.do_eval else None,
compute_metrics=compute_metrics,
tokenizer=feature_extractor,
data_collator=collate_fn,
)
# Training
if training_args.do_train:
checkpoint = None
if training_args.resume_from_checkpoint is not None:
checkpoint = training_args.resume_from_checkpoint
elif last_checkpoint is not None:
checkpoint = last_checkpoint
train_result = trainer.train(resume_from_checkpoint=checkpoint)
trainer.save_model()
trainer.log_metrics("train", train_result.metrics)
trainer.save_metrics("train", train_result.metrics)
trainer.save_state()
# Evaluation
if training_args.do_eval:
logger.info("*** Evaluate ***")
metrics = trainer.evaluate()
trainer.log_metrics("eval", metrics)
trainer.save_metrics("eval", metrics)
if training_args.do_predict:
logger.info("*** Predict ***")
# Removing the `label` columns because it contains -1 and Trainer won't like that.
predict_dataset = ds["validation"]
# predict_dataset = predict_dataset.remove_columns("labels")
predictions = trainer.predict(predict_dataset, metric_key_prefix="predict").predictions
predictions = np.squeeze(predictions) if is_regression else np.argmax(predictions, axis=1)
output_predict_file = os.path.join(training_args.output_dir, f"predict_results_{task}.txt")
if trainer.is_world_process_zero():
with open(output_predict_file, "w") as writer:
logger.info(f"***** Predict results {task} *****")
writer.write("index\tprediction\n")
for index, (guid, item) in enumerate(zip(validation_guid_array, predictions)):
if is_regression:
writer.write(f"{index}\t{guid}\t{item:3.3f}\n")
else:
item = labels[item]
writer.write(f"{index}\t{guid}\t{item}\n")
# Write model card and (optionally) push to hub
kwargs = {
"finetuned_from": model_args.model_name_or_path,
"tasks": "image-classification",
"dataset": data_args.dataset_name,
"tags": ["image-classification"],
}
if training_args.push_to_hub:
trainer.push_to_hub(**kwargs)
else:
trainer.create_model_card(**kwargs)
if __name__ == "__main__":
main()
| 22,444 | 41.18985 | 205 | py |
robust-transformers | robust-transformers-main/examples/pytorch/image-classification/domino_learnt_slicer.py | import math
import numpy as np
from turtle import forward
import torch
import torch.utils.checkpoint
from packaging import version
from torch import nn, optim, autograd
import torch.distributed as dist
from torch.distributed import ReduceOp
from torch.nn import BCEWithLogitsLoss, CrossEntropyLoss, MSELoss
from dataclasses import dataclass, field
from collections.abc import Mapping
from typing import TYPE_CHECKING, Any, Callable, Dict, List, Optional, Tuple, Union
from transformers.modeling_utils import PreTrainedModel, PretrainedConfig
from torch.distributions.categorical import Categorical
from torch.distributions.uniform import Uniform
from torch.distributions.kl import kl_divergence
from transformers.modeling_outputs import SequenceClassifierOutput
class DominoSlicer(nn.Module):
def __init__(self, args, training_args, dro_args, task_model):
super().__init__()
self.args = args
self.dro_args = dro_args
self.training_args = training_args
self.task_model = task_model
self.n_slices = args.n_slices
self.batch_size = training_args.per_device_train_batch_size
self.n_features = args.n_features
self.entropy_reg = args.entropy_reg
self.marginal_reg = args.marginal_reg
# self.grouper_model = nn.Sequential(
# nn.Linear(self.n_features, 64),
# nn.ReLU(),
# nn.Linear(64, 32),
# nn.ReLU(),
# nn.Linear(32, self.n_slices),
# nn.Softmax()
# )
self.grouper_model = nn.Sequential(
nn.Linear(self.n_features, 128),
nn.ReLU(),
nn.Linear(128, 64),
nn.ReLU(),
nn.Linear(64, self.n_slices),
nn.Softmax()
)
# gcdro parameters relevant for group-wise maximization
self.count_cat = self._prepare_input(torch.ones(self.n_slices).float())
self.gamma = dro_args.gamma
self.max_var_weight = dro_args.max_var_weight # GCDRO uses a minimum variance if weight
self.min_var_weight = dro_args.min_var_weight
self.alpha = dro_args.alpha # How many groups to underweigh.
# Beta cover
self.beta = dro_args.beta
self.beta_ema = dro_args.beta_ema
self.do_instance_reweight = dro_args.do_instance_reweight
# quantities maintained throughout training for instance level G-DRO
self.accum_losses = None
# running averages
self.adj = self._prepare_input(torch.zeros(self.n_slices).float())
self.adv_probs = self._prepare_input(torch.ones(self.n_slices)) #/self.n_groups
self.reverse_adv_probs = self._prepare_input(torch.ones(self.n_slices)) #/self.n_groups
self.group_loss = self._prepare_input(torch.zeros(self.n_slices))
self.count_cat = self._prepare_input(torch.ones(self.n_slices).float())
self.exp_avg_loss = self._prepare_input(torch.zeros(self.n_slices))
self.group_distribution = self._prepare_input(torch.full((self.batch_size, self.n_slices), 1/self.n_slices))
self.exp_avg_initialized = self._prepare_input(torch.zeros(self.n_slices).byte())
self.reset_stats()
def _prepare_input(self, data: Union[torch.Tensor, Any]) -> Union[torch.Tensor, Any]:
"""
Prepares one `data` before feeding it to the model, be it a tensor or a nested list/dictionary of tensors.
"""
if isinstance(data, Mapping):
return type(data)({k: self._prepare_input(v) for k, v in data.items()})
elif isinstance(data, (tuple, list)):
return type(data)(self._prepare_input(v) for v in data)
elif isinstance(data, torch.Tensor):
kwargs = dict(device=self.training_args.device)
if self.training_args.deepspeed and data.dtype != torch.int64:
# NLP models inputs are int64 and those get adjusted to the right dtype of the
# embedding. Other models such as wav2vec2's inputs are already float and thus
# may need special handling to match the dtypes of the model
kwargs.update(dict(dtype=self.training_args.hf_deepspeed_config.dtype()))
return data.to(**kwargs)
return data
def forward(self, pixel_values, group, group_features=None, labels=None, instance_weight=None, adversary=False, **kwargs):
# inputs has input_ids, attention_mask for task_model, group ids are computed dynamically based on features
# which is a vector of size self.n_features
"""
1. Compute group distributions.
2. Get instance level losses.
2. Compute aggregate loss over groups.
"""
self.group_distribution = self.grouper_model(group_features) # B * G
task_model_outputs = self.task_model(pixel_values, labels=labels)
per_sample_losses = task_model_outputs["loss"] # B * 1 [Individual losses]
# instance weights not used when training the adversary
if instance_weight is not None and self.do_instance_reweight and not adversary:
per_sample_losses = instance_weight*per_sample_losses
if self.training_args.eiil:
# multiply individual losses with scale (with respect to which we compute gradients for different environments across tasks)
# logits = nll(logits * scale) i.e. cross entropy (this will take some time to impliment since task_model already returns loss value after cross entropy)
# use yhat, a specifically defined cross entropy function here and overwrite individual losses.
pass
# Group wise loss.
group_losses = self.compute_soft_group_loss(per_sample_losses, self.group_distribution)
group_count = self.group_distribution.sum(0)
# group_loss, group_count = self.compute_group_avg(per_sample_losses, group_idx)
yhat = task_model_outputs[1]
minibatch_group_acc, minibatch_group_count = self.compute_group_avg((torch.argmax(yhat,1)==labels).float(), self.group_distribution)
# group_losses = self.compute_group_loss(per_sample_losses, group)
# group_map = (group == self._prepare_input(torch.arange(self.n_slices).unsqueeze(1).long())).float()
# group_count = group_map.sum(1)
# dist.all_reduce(group_count, op=ReduceOp.SUM)
# dist.all_reduce(group_losses, op=ReduceOp.SUM)
# normalize group_wise loss.
group_denom = group_count + (group_count==0).float() # avoid nans
group_losses = (group_losses)/group_denom
# only update this in primary pass
if not adversary:
self.update_exp_avg_loss(group_losses.detach(), group_count.detach())
adjusted_loss = self.exp_avg_loss + self.adj/torch.sqrt(self.count_cat)
if adversary:
if self.training_args.eiil:
loss, weights = self.compute_eiil_loss(group_losses, adjusted_loss)
else:
loss, weights = self.compute_adversary_loss_greedy(group_losses, adjusted_loss)
# Regularizer 1 (Entropy of group distribution should be high)
cp = Categorical(self.group_distribution)
reg1 = -cp.entropy()
loss += self.entropy_reg * reg1.mean()
# Regularizer 2 (biased estimate of group marginal should be closer to a uniform prior)
marginal = Categorical(self.group_distribution.sum(0)/self.group_distribution.sum())
prior = Categorical(self._prepare_input(torch.full((self.n_slices,), 1.0/self.n_slices)))
reg2 = kl_divergence(marginal, prior)
loss += self.marginal_reg * reg2
self.update_stats(loss, group_losses, minibatch_group_acc, minibatch_group_count, weights)
# Redundancy regularizer (which enables models to learn disparate group assignments)
# if group_features are trainable, the average feature vectors of each group after assignment should be as little as possible.
else:
loss, weights = self.compute_loss_greedy(group_losses, adjusted_loss)
# update stats
self.update_stats(loss, group_losses, minibatch_group_acc, minibatch_group_count, weights)
# the expected return functions should contain same outputs as task_model
return SequenceClassifierOutput(loss=loss, logits=task_model_outputs["logits"])
def compute_group_loss(self, losses, group_idx):
group_map = (group_idx == self._prepare_input(torch.arange(self.n_slices).unsqueeze(1).long())).float()
group_loss = (group_map @ losses.view(-1))
return group_loss
def compute_loss_greedy(self, group_loss, ref_loss):
sorted_idx = ref_loss.sort(descending=True)[1]
past_frac = self.count_cat / self.count_cat.sum()
sorted_frac = past_frac[sorted_idx]
cutoff_count = torch.sum(torch.cumsum(sorted_frac, 0) < self.alpha)
if cutoff_count == len(sorted_frac):
cutoff_count = len(sorted_frac) - 1
self.adv_probs = self.adv_probs.new_full(self.adv_probs.size(), self.min_var_weight)
self.adv_probs[sorted_idx[:cutoff_count]] = 1.0 / self.alpha
leftover_mass = 1.0 - sorted_frac[:cutoff_count].sum().div(self.alpha)
tiebreak_fraction = leftover_mass / sorted_frac[cutoff_count] # check!
self.adv_probs[sorted_idx[cutoff_count]] = tiebreak_fraction
robust_loss = (group_loss @ self.adv_probs)
# There is an issue here that Paul pointed out. There are many
self.group_loss = group_loss
return robust_loss, self.adv_probs
def compute_soft_group_loss(self, losses, group_prob):
group_wise_loss = group_prob * losses.unsqueeze(1)
return group_wise_loss.sum(0)
def compute_eiil_loss(self, group_loss, ref_loss):
"""
scale = torch.tensor(1.).cuda().requires_grad_()
lossa = (loss.squeeze() * env_w.sigmoid()).mean()
grada = autograd.grad(lossa, [scale], create_graph=True)[0]
penaltya = torch.sum(grada**2)
# penalty for env b
lossb = (loss.squeeze() * (1-env_w.sigmoid())).mean()
gradb = autograd.grad(lossb, [scale], create_graph=True)[0]
penaltyb = torch.sum(gradb**2)
# negate
npenalty = - torch.stack([penaltya, penaltyb]).mean()
"""
# scale weighted group losses by 1.0
# Then take gradients of each group loss, compute its norm and take mean across groups
# Finally add that as the penalty
import pdb; pdb.set_trace()
scale = self._prepare_input(torch.tensor(1.)).requires_grad_()
group_grads = autograd.grad(group_loss, [scale], create_graph=True)[0]
self.reverse_adv_probs = self.reverse_adv_probs.new_full(self.reverse_adv_probs.size(), self.max_var_weight)
penalty = torch.sum(group_grads**2)
npenalty = - torch.stack(penalty).mean()
return npenalty, self.reverse_adv_probs
def compute_adversary_loss_greedy(self, group_loss, ref_loss):
sorted_idx = ref_loss.sort(descending=True)[1]
past_frac = self.count_cat / self.count_cat.sum()
sorted_frac = past_frac[sorted_idx]
cutoff_count = torch.sum(torch.cumsum(sorted_frac, 0) < self.alpha)
if cutoff_count == len(sorted_frac):
cutoff_count = len(sorted_frac) - 1
self.reverse_adv_probs = self.reverse_adv_probs.new_full(self.reverse_adv_probs.size(), self.max_var_weight)
self.reverse_adv_probs[sorted_idx[:cutoff_count]] = 1.0 * self.alpha
leftover_mass = 1.0 - sorted_frac[:cutoff_count].sum().mul(self.alpha)
tiebreak_fraction = leftover_mass * sorted_frac[cutoff_count] # check!
self.reverse_adv_probs[sorted_idx[cutoff_count]] = tiebreak_fraction
# alternate strategy. (alpha groups have the highest weight but these are the min loss groups)
"""
sorted_idx = ref_loss.sort(descending=False)[1]
past_frac = self.count_cat / self.count_cat.sum()
sorted_frac = past_frac[sorted_idx]
cutoff_count = torch.sum(torch.cumsum(sorted_frac, 0) < self.alpha)
if cutoff_count == len(sorted_frac):
cutoff_count = len(sorted_frac) - 1
self.reverse_adv_probs = self.reverse_adv_probs.new_full(self.reverse_adv_probs.size(), self.min_var_weight)
self.reverse_adv_probs[sorted_idx[:cutoff_count]] = 1.0 / self.alpha
leftover_mass = 1.0 - sorted_frac[:cutoff_count].sum().div(self.alpha)
tiebreak_fraction = leftover_mass / sorted_frac[cutoff_count] # check!
self.reverse_adv_probs[sorted_idx[cutoff_count]] = tiebreak_fraction
"""
## Reversed weights (up-weight the highest loss groups even more)
# self.reverse_adv_probs = self.reverse_adv_probs.new_full(self.reverse_adv_probs.size(), self.min_var_weight)
# self.reverse_adv_probs[sorted_idx[:cutoff_count]] = 1.0 / self.alpha
# leftover_mass = 1.0 - sorted_frac[:cutoff_count].sum().div(self.alpha)
# tiebreak_fraction = leftover_mass / sorted_frac[cutoff_count] # check!
# self.reverse_adv_probs[sorted_idx[cutoff_count]] = tiebreak_fraction
robust_loss = -(group_loss @ self.reverse_adv_probs)
return robust_loss, self.reverse_adv_probs
def update_exp_avg_loss(self, group_loss, group_count):
## TODO: Chunting's code is doing a different kind of exponential averaging, exp_avf_initialized not used.
prev_weights = (1 - self.gamma*(group_count>0).float()) * (self.exp_avg_initialized>0).float()
curr_weights = 1 - prev_weights
self.exp_avg_loss = self.exp_avg_loss * prev_weights + group_loss*curr_weights
## TODO: Chunting's code is also doing an exponential averaging of counts (with alpha 0.05)
self.count_cat = self.count_cat.mul(1 - 0.05).add(group_count, alpha=0.05)
self.exp_avg_initialized = (self.exp_avg_initialized>0) + (group_count>0)
def compute_group_avg(self, losses, group_distribution):
# Find argmax for groups
group_idx = torch.argmax(group_distribution, dim=1)
group_map = (group_idx == self._prepare_input(torch.arange(self.n_slices).unsqueeze(1).long())).float()
group_count = group_map.sum(1)
group_denom = group_count + (group_count==0).float() # avoid nans
group_loss = (group_map @ losses.view(-1))/group_denom
return group_loss, group_count
def reset_stats(self):
self.processed_data_counts = self._prepare_input(torch.zeros(self.n_slices))
self.update_data_counts = self._prepare_input(torch.zeros(self.n_slices))
self.update_batch_counts = self._prepare_input(torch.zeros(self.n_slices))
self.avg_group_loss = self._prepare_input(torch.zeros(self.n_slices))
self.avg_group_acc = self._prepare_input(torch.zeros(self.n_slices))
# tr_loss_step_primary = torch.tensor(0.0).to(args.device)
self.avg_per_sample_loss = self._prepare_input(torch.tensor(0.0))
self.avg_actual_loss = self._prepare_input(torch.tensor(0.0))
self.avg_acc = self._prepare_input(torch.tensor(0.0))
self.batch_count = 0.
#TODO: Chunting also sets weights to 1 here, and self.exp_avg_loss to 0
self.exp_avg_loss.fill_(0.)
self.adv_probs.fill_(1.)
# TODO: (Check with chunting's code, but she is being conservative with the inner beta update. )
self.accum_losses = None
def update_stats(self, actual_loss, group_loss, group_acc, group_count, weights=None):
# avg group loss
denom = self.processed_data_counts + group_count
denom += (denom==0).float()
prev_weight = self.processed_data_counts/denom
curr_weight = group_count/denom
self.avg_group_loss = prev_weight*self.avg_group_loss + curr_weight*group_loss
# avg group acc
self.avg_group_acc = prev_weight*self.avg_group_acc + curr_weight*group_acc
# batch-wise average actual loss
denom = self.batch_count + 1
self.avg_actual_loss = (self.batch_count/denom)*self.avg_actual_loss + (1/denom)*actual_loss
# counts
self.processed_data_counts += group_count
if self.dro_args.is_robust:
self.update_data_counts += group_count*((weights>0).float())
self.update_batch_counts += ((group_count*weights)>0).float()
else:
self.update_data_counts += group_count
self.update_batch_counts += (group_count>0).float()
self.batch_count+=1
# avg per-sample quantities
group_frac = self.processed_data_counts/(self.processed_data_counts.sum())
self.avg_per_sample_loss = group_frac @ self.avg_group_loss
self.avg_acc = group_frac @ self.avg_group_acc
def get_stats(self, model=None, args=None):
stats_dict = {}
for idx in range(self.n_slices):
stats_dict[f'avg_loss_group:{idx}'] = self.avg_group_loss[idx].item()
stats_dict[f'exp_avg_loss_group:{idx}'] = self.exp_avg_loss[idx].item()
stats_dict[f'avg_acc_group:{idx}'] = self.avg_group_acc[idx].item()
stats_dict[f'processed_data_count_group:{idx}'] = self.processed_data_counts[idx].item()
stats_dict[f'update_data_count_group:{idx}'] = self.update_data_counts[idx].item()
stats_dict[f'update_batch_count_group:{idx}'] = self.update_batch_counts[idx].item()
# if initially these are float?
stats_dict['avg_actual_loss'] = self.avg_actual_loss.item()
stats_dict['avg_per_sample_loss'] = self.avg_per_sample_loss.item()
stats_dict['avg_acc'] = self.avg_acc.item()
# Model stats
# if model is not None:
# assert args is not None
# stats_dict = self.get_model_stats(model, args, stats_dict)
return stats_dict
def log_stats(self, logger, is_training):
if logger is None:
return
logger.info(f'Average incurred loss: {self.avg_per_sample_loss.item():.3f} \n')
logger.info(f'Average sample loss: {self.avg_actual_loss.item():.3f} \n')
logger.info(f'Average acc: {self.avg_acc.item():.3f} \n')
for group_idx in range(self.n_slices):
logger.info(
# f' {self.group_str(group_idx)} '
f'[n = {int(self.processed_data_counts[group_idx])}]:\t'
f'loss = {self.avg_group_loss[group_idx]:.3f} '
f'exp loss = {self.exp_avg_loss[group_idx]:.3f} '
f'adv prob = {self.adv_probs[group_idx]:3f} '
f'acc = {self.avg_group_acc[group_idx]:.3f}\n')
# logger.flush()
def compute_beta_cover(self, seed, epoch, dataset, losses=None, groups=None):
# beta cover computed at the end of every epoch
# split array can be computed based on grouper model highest probability group assignments, which are passed to this function if needed.
if groups is not None:
split_array = groups
else:
split_array = np.array([item["group"] for item in dataset])
total = len(split_array)
if losses is not None:
if self.accum_losses is None:
self.accum_losses = losses
else:
self.accum_losses = self.accum_losses * (1 - self.beta_ema) + losses * self.beta_ema
for gidx in range(self.n_slices):
select_idx = np.where(split_array == gidx)[0]
count = len(select_idx)
idx_sorted = np.argsort(self.accum_losses[select_idx])
idx = select_idx[idx_sorted][::-1]
cutoff_count = int((total - count) * count * self.beta / (total - count * self.beta))
self.weight_array[idx] = count / total
self.weight_array[idx[:cutoff_count]] = 1.0 / self.beta
else:
self.weight_array = np.ones(total)
return self.weight_array | 20,182 | 48.957921 | 165 | py |
robust-transformers | robust-transformers-main/examples/pytorch/image-classification/domino_slicer.py | from __future__ import annotations
import warnings
from functools import wraps
from typing import Union
import meerkat as mk
import numpy as np
import sklearn.cluster as cluster
from scipy import linalg
from scipy.special import logsumexp
from sklearn.decomposition import PCA
from sklearn.exceptions import ConvergenceWarning
from sklearn.mixture import GaussianMixture
from sklearn.mixture._base import _check_X, check_random_state
from sklearn.mixture._gaussian_mixture import (
_compute_precision_cholesky,
_estimate_gaussian_covariances_diag,
_estimate_gaussian_covariances_full,
_estimate_gaussian_covariances_spherical,
_estimate_gaussian_covariances_tied,
)
from sklearn.preprocessing import label_binarize
from sklearn.utils.validation import check_is_fitted
from tqdm.auto import tqdm
from abc import ABC, abstractmethod
from dataclasses import dataclass
import torch.nn as nn
from utils import unpack_args
class Slicer(ABC):
@dataclass
class Config:
pass
RESOURCES_REQUIRED = {"cpu": 1, "custom_resources": {"ram_gb": 4}}
def __init__(self, n_slices: int):
self.config = self.Config()
self.config.n_slices = n_slices
@abstractmethod
def fit(
self,
model: nn.Module = None,
data_dp: mk.DataPanel = None,
) -> Slicer:
raise NotImplementedError()
@abstractmethod
def transform(self, data_dp: mk.DataPanel) -> mk.DataPanel:
raise NotImplementedError()
class DominoSlicer(Slicer):
r"""
Slice Discovery based on the Domino Mixture Model.
Discover slices by jointly modeling a mixture of input embeddings (e.g. activations
from a trained model), class labels, and model predictions. This encourages slices
that are homogeneous with respect to error type (e.g. all false positives).
Examples
--------
Suppose you've trained a model and stored its predictions on a dataset in
a `Meerkat DataPanel <https://github.com/robustness-gym/meerkat>`_ with columns
"emb", "target", and "pred_probs". After loading the DataPanel, you can discover
underperforming slices of the validation dataset with the following:
.. code-block:: python
from domino import DominoSlicer
dp = ... # Load dataset into a Meerkat DataPanel
# split dataset
valid_dp = dp.lz[dp["split"] == "valid"]
test_dp = dp.lz[dp["split"] == "test"]
domino = DominoSlicer()
domino.fit(
data=valid_dp, embeddings="emb", targets="target", pred_probs="pred_probs"
)
dp["domino_slices"] = domino.transform(
data=test_dp, embeddings="emb", targets="target", pred_probs="pred_probs"
)
Args:
n_slices (int, optional): The number of slices to discover.
Defaults to 5.
covariance_type (str, optional): The type of covariance parameter
:math:`\mathbf{\Sigma}` to use. Same as in sklearn.mixture.GaussianMixture.
Defaults to "diag", which is recommended.
n_pca_components (Union[int, None], optional): The number of PCA components
to use. If ``None``, then no PCA is performed. Defaults to 128.
n_mixture_components (int, optional): The number of clusters in the mixture
model, :math:`\bar{k}`. This differs from ``n_slices`` in that the
``DominoSDM`` only returns the top ``n_slices`` with the highest error rate
of the ``n_mixture_components``. Defaults to 25.
y_log_likelihood_weight (float, optional): The weight :math:`\gamma` applied to
the :math:`P(Y=y_{i} | S=s)` term in the log likelihood during the E-step.
Defaults to 1.
y_hat_log_likelihood_weight (float, optional): The weight :math:`\hat{\gamma}`
applied to the :math:`P(\hat{Y} = h_\theta(x_i) | S=s)` term in the log
likelihood during the E-step. Defaults to 1.
max_iter (int, optional): The maximum number of iterations to run. Defaults
to 100.
init_params (str, optional): The initialization method to use. Options are
the same as in sklearn.mixture.GaussianMixture plus one addition,
"confusion". If "confusion", the clusters are initialized such that almost
all of the examples in a cluster come from same cell in the confusion
matrix. See Notes below for more details. Defaults to "confusion".
confusion_noise (float, optional): Only used if ``init_params="confusion"``.
The scale of noise added to the confusion matrix initialization. See notes
below for more details.
Defaults to 0.001.
Notes
-----
The mixture model is an extension of a standard Gaussian Mixture Model. The model is
based on the assumption that data is generated according to the following generative
process.
* Each example belongs to one of :math:`\bar{k}` slices. This slice
:math:`S` is sampled from a categorical
distribution :math:`S \sim Cat(\mathbf{p}_S)` with parameter :math:`\mathbf{p}_S
\in\{\mathbf{p} \in \mathbb{R}_+^{\bar{k}} : \sum_{i = 1}^{\bar{k}} p_i = 1\}`
(see ``DominoSDM.mm.weights_``).
* Given the slice :math:`S'`, the embeddings are normally distributed
:math:`Z | S \sim \mathcal{N}(\mathbf{\mu}, \mathbf{\Sigma}`) with parameters
mean :math:`\mathbf{\mu} \in \mathbb{R}^d` (see ``DominoSDM.mm.means_``) and
:math:`\mathbf{\Sigma} \in \mathbb{S}^{d}_{++}`
(see ``DominoSDM.mm.covariances_``;
normally this parameter is constrained to the set of symmetric positive definite
:math:`d \\times d` matrices, however the argument ``covariance_type`` allows for
other constraints).
* Given the slice, the labels vary as a categorical
:math:`Y |S \sim Cat(\mathbf{p})` with parameter :math:`\mathbf{p}
\in \{\mathbf{p} \in \mathbb{R}^c_+ : \sum_{i = 1}^c p_i = 1\}` (see
``DominoSDM.mm.y_probs``).
* Given the slice, the model predictions also vary as a categorical
:math:`\hat{Y} | S \sim Cat(\mathbf{\hat{p}})` with parameter
:math:`\mathbf{\hat{p}} \in \{\mathbf{\hat{p}} \in \mathbb{R}^c_+ :
\sum_{i = 1}^c \hat{p}_i = 1\}` (see ``DominoSDM.mm.y_hat_probs``).
The mixture model is, thus, parameterized by :math:`\phi = [\mathbf{p}_S, \mu,
\Sigma, \mathbf{p}, \mathbf{\hat{p}}]` corresponding to the attributes
``weights_, means_, covariances_, y_probs, y_hat_probs`` respectively. The
log-likelihood over the :math:`n` examples in the validation dataset :math:`D_v` is
given as followsand maximized using expectation-maximization:
.. math::
\ell(\phi) = \sum_{i=1}^n \log \sum_{s=1}^{\hat{k}} P(S=s)P(Z=z_i| S=s)
P( Y=y_i| S=s)P(\hat{Y} = h_\theta(x_i) | S=s)
We include two optional hyperparameters
:math:`\gamma, \hat{\gamma} \in \mathbb{R}_+`
(see ``y_log_liklihood_weight`` and ``y_hat_log_likelihood_weight`` below) that
balance the importance of modeling the class labels and predictions against the
importance of modeling the embedding. The modified log-likelihood over :math:`n`
examples is given as follows:
.. math::
\ell(\phi) = \sum_{i=1}^n \log \sum_{s=1}^{\hat{k}} P(S=s)P(Z=z_i| S=s)
P( Y=y_i| S=s)^\gamma P(\hat{Y} = h_\theta(x_i) | S=s)^{\hat{\gamma}}
.. attention::
Although we model the prediction :math:`\hat{Y}` as a categorical random
variable, in practice predictions are sometimes "soft" (e.g. the output
of a softmax layer is a probability distribution over labels, not a single
label). In these cases, the prediction :math:`\hat{Y}` is technically a
dirichlet random variable (i.e. a distribution over distributions).
However, to keep the implementation simple while still leveraging the extra
information provided by "soft" predictions, we naïvely plug the "soft"
predictions directly into the categorical PMF in the E-step and the update in
the M-step. Specifically, during the E-step, instead of computing the
categorical PMF :math:`P(\hat{Y}=\hat{y_i} | S=s)` we compute
:math:`\sum_{j=1}^c \hat{y_i}(j) P(\hat{Y}=j | S=s)` where :math:`\hat{y_i}(j)`
is the "soft" prediction for class :math:`j` (we can
think of this like we're marginalizing out the uncertainty in the prediction).
During the M-step, we compute a "soft" update for the categorical parameters
:math:`p_j^{(s)} = \sum_{i=1}^n Q(s,i) \hat{y_i}(j)` where :math:`Q(s,i)`
is the "responsibility" of slice :math:`s` towards the data point :math:`i`.
When using ``"confusion"`` initialization, each slice $s^{(j)}$ is assigned a
:math:`y^{(j)}\in \mathcal{Y}` and :math:`\hat{y}^{(j)} \in \mathcal{Y}` (*i.e.*
each slice is assigned a cell in the confusion matrix). This is typically done in a
round-robin fashion so that there are at least
:math:`\floor{\hat{k} / {|\mathcal{Y}|^2}}`
slices assigned to each cell in the confusion matrix. Then, we fill in the initial
responsibility matrix :math:`Q \in \mathbb{R}^{n \times \hat{k}}`, where each cell
:math:`Q_{ij}` corresponds to our model's initial estimate of
:math:`P(S=s^{(j)}|Y=y_i,
\hat{Y}=\hat{y}_i)`. We do this according to
.. math::
\bar{Q}_{ij} \leftarrow
\begin{cases}
1 + \epsilon & y_i=y^{(j)} \land \hat{y}_i = \hat{y}^{(j)} \\
\epsilon & \text{otherwise}
\end{cases}
.. math::
Q_{ij} \leftarrow \frac{\bar{Q}_{ij} } {\sum_{l=1}^{\hat{k}} \bar{Q}_{il}}
where :math:`\epsilon` is random noise which ensures that slices assigned to the
same confusion matrix cell won't have the exact same initialization. We sample
:math:`\epsilon` uniformly from the range ``(0, confusion_noise]``.
"""
def __init__(
self,
n_slices: int = 5,
covariance_type: str = "diag",
n_pca_components: Union[int, None] = 128,
n_mixture_components: int = 25,
y_log_likelihood_weight: float = 1,
y_hat_log_likelihood_weight: float = 1,
max_iter: int = 100,
init_params: str = "confusion",
confusion_noise: float = 1e-3,
):
super().__init__(n_slices=n_slices)
self.config.covariance_type = covariance_type
self.config.n_pca_components = n_pca_components
self.config.n_mixture_components = n_mixture_components
self.config.init_params = init_params
self.config.confusion_noise = confusion_noise
self.config.y_log_likelihood_weight = y_log_likelihood_weight
self.config.y_hat_log_likelihood_weight = y_hat_log_likelihood_weight
self.config.max_iter = max_iter
if self.config.n_pca_components is None:
self.pca = None
else:
self.pca = PCA(n_components=self.config.n_pca_components)
self.mm = DominoMixture(
n_components=self.config.n_mixture_components,
reg_covar=1e-6,
y_log_likelihood_weight=self.config.y_log_likelihood_weight,
y_hat_log_likelihood_weight=self.config.y_hat_log_likelihood_weight,
covariance_type=self.config.covariance_type,
init_params=self.config.init_params,
max_iter=self.config.max_iter,
confusion_noise=self.config.confusion_noise,
)
def fit(
self,
data: Union[dict, mk.DataPanel] = None,
embeddings: Union[str, np.ndarray] = "embedding",
targets: Union[str, np.ndarray] = "target",
pred_probs: Union[str, np.ndarray] = "pred_probs",
) -> DominoSlicer:
"""
Fit the mixture model to data.
Args:
data (mk.DataPanel, optional): A `Meerkat DataPanel` with columns for
embeddings, targets, and prediction probabilities. The names of the
columns can be specified with the ``embeddings``, ``targets``, and
``pred_probs`` arguments. Defaults to None.
embeddings (Union[str, np.ndarray], optional): The name of a colum in
``data`` holding embeddings. If ``data`` is ``None``, then an np.ndarray
of shape (n_samples, dimension of embedding). Defaults to
"embedding".
targets (Union[str, np.ndarray], optional): The name of a column in
``data`` holding class labels. If ``data`` is ``None``, then an
np.ndarray of shape (n_samples,). Defaults to "target".
pred_probs (Union[str, np.ndarray], optional): The name of
a column in ``data`` holding model predictions (can either be "soft"
probability scores or "hard" 1-hot encoded predictions). If
``data`` is ``None``, then an np.ndarray of shape (n_samples, n_classes)
or (n_samples,) in the binary case. Defaults to "pred_probs".
Returns:
DominoSDM: Returns a fit instance of DominoSDM.
"""
embeddings, targets, pred_probs = unpack_args(
data, embeddings, targets, pred_probs
)
# np.stack(np.asarray(embeddings))
if self.pca is not None:
self.pca.fit(X=embeddings)
embeddings = self.pca.transform(X=embeddings)
self.mm.fit(X=embeddings, y=targets, y_hat=pred_probs)
if self.mm.y_hat_probs is not None and self.mm.y_probs is not None:
self.slice_cluster_indices = (
-np.abs((self.mm.y_hat_probs - self.mm.y_probs).max(axis=1))
).argsort()[: self.config.n_slices]
elif self.mm.y_hat_probs is not None:
# Return slices in the order of highest probability p(y_pred|slice)
self.slice_cluster_indices = (
-np.abs((self.mm.y_hat_probs).max(axis=1))
).argsort()[: self.config.n_slices]
else:
self.slice_cluster_indices = np.arange(self.config.n_slices)
return self
def transform(
self,
data: Union[dict, mk.DataPanel] = None,
embeddings: Union[str, np.ndarray] = "embedding",
targets: Union[str, np.ndarray] = "target",
pred_probs: Union[str, np.ndarray] = "pred_probs",
) -> np.ndarray:
"""
Estimate slice membership for data using a fit mixture model.
.. caution::
Must call ``DominoSDM.fit`` prior to calling ``DominoSDM.transform``.
Args:
data (mk.DataPanel, optional): A `Meerkat DataPanel` with columns for
embeddings, targets, and prediction probabilities. The names of the
columns can be specified with the ``embeddings``, ``targets``, and
``pred_probs`` arguments. Defaults to None.
embeddings (Union[str, np.ndarray], optional): The name of a colum in
``data`` holding embeddings. If ``data`` is ``None``, then an np.ndarray
of shape (n_samples, dimension of embedding). Defaults to
"embedding".
targets (Union[str, np.ndarray], optional): The name of a column in
``data`` holding class labels. If ``data`` is ``None``, then an
np.ndarray of shape (n_samples,). Defaults to "target".
pred_probs (Union[str, np.ndarray], optional): The name of
a column in ``data`` holding model predictions (can either be "soft"
probability scores or "hard" 1-hot encoded predictions). If
``data`` is ``None``, then an np.ndarray of shape (n_samples, n_classes)
or (n_samples,) in the binary case. Defaults to "pred_probs".
Returns:
np.ndarray: A ``np.ndarray`` of shape (n_samples, n_slices).
"""
embeddings, targets, pred_probs = unpack_args(
data, embeddings, targets, pred_probs
)
if self.pca is not None:
embeddings = self.pca.transform(X=embeddings)
clusters = self.mm.predict_proba(embeddings, y=targets, y_hat=pred_probs)
return clusters[:, self.slice_cluster_indices]
class DominoMixture(GaussianMixture):
@wraps(GaussianMixture.__init__)
def __init__(
self,
*args,
y_log_likelihood_weight: float = 1,
y_hat_log_likelihood_weight: float = 1,
confusion_noise: float = 1e-3,
**kwargs,
):
self.y_log_likelihood_weight = y_log_likelihood_weight
self.y_hat_log_likelihood_weight = y_hat_log_likelihood_weight
self.confusion_noise = confusion_noise
super().__init__(*args, **kwargs)
def _initialize_parameters(self, X, y, y_hat, random_state):
"""Initialize the model parameters.
Parameters
----------
X : array-like of shape (n_samples, n_features)
random_state : RandomState
A random number generator instance that controls the random seed
used for the method chosen to initialize the parameters.
"""
n_samples, _ = X.shape
if self.init_params == "kmeans":
resp = np.zeros((n_samples, self.n_components))
label = (
cluster.KMeans(
n_clusters=self.n_components, n_init=1, random_state=random_state
)
.fit(X)
.labels_
)
resp[np.arange(n_samples), label] = 1
elif self.init_params == "random":
resp = random_state.rand(n_samples, self.n_components)
resp /= resp.sum(axis=1)[:, np.newaxis]
elif self.init_params == "confusion":
num_classes = y.shape[-1]
if self.n_components < num_classes ** 2:
raise ValueError(
"Can't use parameter init 'error' when "
"`n_components` < `num_classes **2`"
)
resp = np.matmul(y[:, :, np.newaxis], y_hat[:, np.newaxis, :]).reshape(
len(y), -1
)
resp = np.concatenate(
[resp]
* (
int(self.n_components / (num_classes ** 2))
+ (self.n_components % (num_classes ** 2) > 0)
),
axis=1,
)[:, : self.n_components] # This is basically repeating the confusuon matrix howmany ever times needed to fill up num_components.
resp /= resp.sum(axis=1)[:, np.newaxis]
resp += (
random_state.rand(n_samples, self.n_components) * self.confusion_noise
)
resp /= resp.sum(axis=1)[:, np.newaxis]
else:
raise ValueError(
"Unimplemented initialization method '%s'" % self.init_params
)
self._initialize(X, y, y_hat, resp)
#print(self.y_probs[:, 0].sum()) # Removing to support different types of clustering.
def _initialize(self, X, y, y_hat, resp):
"""Initialization of the Gaussian mixture parameters.
Parameters
----------
X : array-like of shape (n_samples, n_features)
resp : array-like of shape (n_samples, n_components)
"""
n_samples, _ = X.shape
weights, means, covariances, y_probs, y_hat_probs = _estimate_parameters(
X, y, y_hat, resp, self.reg_covar, self.covariance_type
)
weights /= n_samples
self.weights_ = weights if self.weights_init is None else self.weights_init
self.means_ = means if self.means_init is None else self.means_init
self.y_probs, self.y_hat_probs = y_probs, y_hat_probs
if self.precisions_init is None:
self.covariances_ = covariances
self.precisions_cholesky_ = _compute_precision_cholesky(
covariances, self.covariance_type
)
elif self.covariance_type == "full":
self.precisions_cholesky_ = np.array(
[
linalg.cholesky(prec_init, lower=True)
for prec_init in self.precisions_init
]
)
elif self.covariance_type == "tied":
self.precisions_cholesky_ = linalg.cholesky(
self.precisions_init, lower=True
)
else:
self.precisions_cholesky_ = self.precisions_init
def fit(self, X, y, y_hat):
self.fit_predict(X, y, y_hat)
return self
def _preprocess_ys(self, y: np.ndarray = None, y_hat: np.ndarray = None):
if y is not None:
y = label_binarize(y, classes=np.arange(np.max(y) + 1))
if y.shape[-1] == 1:
# binary targets transform to a column vector with label_binarize
y = np.array([1 - y[:, 0], y[:, 0]]).T
if y_hat is not None:
if len(y_hat.shape) == 1:
y_hat = np.array([1 - y_hat, y_hat]).T
return y, y_hat
def fit_predict(self, X, y, y_hat):
y, y_hat = self._preprocess_ys(y, y_hat)
X = _check_X(X, self.n_components, ensure_min_samples=2)
self._check_n_features(X, reset=True)
self._check_initial_parameters(X)
# if we enable warm_start, we will have a unique initialisation
do_init = not (self.warm_start and hasattr(self, "converged_")) #do_init is True.
n_init = self.n_init if do_init else 1 #This is set to 1.
max_lower_bound = -np.infty
self.converged_ = False
random_state = check_random_state(self.random_state)
n_samples, _ = X.shape
for init in range(n_init):
self._print_verbose_msg_init_beg(init)
if do_init:
self._initialize_parameters(X, y, y_hat, random_state)
lower_bound = -np.infty if do_init else self.lower_bound_
for n_iter in tqdm(range(1, self.max_iter + 1), colour="#f17a4a"):
prev_lower_bound = lower_bound
log_prob_norm, log_resp = self._e_step(X, y, y_hat)
self._m_step(X, y, y_hat, log_resp)
lower_bound = self._compute_lower_bound(log_resp, log_prob_norm)
change = lower_bound - prev_lower_bound
self._print_verbose_msg_iter_end(n_iter, change)
if abs(change) < self.tol:
self.converged_ = True
break
self._print_verbose_msg_init_end(lower_bound)
if lower_bound > max_lower_bound:
max_lower_bound = lower_bound
best_params = self._get_parameters()
best_n_iter = n_iter
if not self.converged_:
warnings.warn(
"Initialization %d did not converge. "
"Try different init parameters, "
"or increase max_iter, tol "
"or check for degenerate data." % (init + 1),
ConvergenceWarning,
)
self._set_parameters(best_params)
self.n_iter_ = best_n_iter
self.lower_bound_ = max_lower_bound
# Always do a final e-step to guarantee that the labels returned by
# fit_predict(X) are always consistent with fit(X).predict(X)
# for any value of max_iter and tol (and any random_state).
_, log_resp = self._e_step(X, y, y_hat)
return log_resp.argmax(axis=1)
def predict_proba(
self, X: np.ndarray, y: np.ndarray = None, y_hat: np.ndarray = None
):
y, y_hat = self._preprocess_ys(y, y_hat)
check_is_fitted(self)
X = _check_X(X, None, self.means_.shape[1])
_, log_resp = self._estimate_log_prob_resp(X, y, y_hat)
return np.exp(log_resp)
def _m_step(self, X, y, y_hat, log_resp):
"""M step.
Parameters
----------
X : array-like of shape (n_samples, n_features)
log_resp : array-like of shape (n_samples, n_components)
Logarithm of the posterior probabilities (or responsibilities) of
the point of each sample in X.
"""
resp = np.exp(log_resp)
n_samples, _ = X.shape
(
self.weights_,
self.means_,
self.covariances_,
self.y_probs,
self.y_hat_probs,
) = _estimate_parameters(
X, y, y_hat, resp, self.reg_covar, self.covariance_type
)
self.weights_ /= n_samples
self.precisions_cholesky_ = _compute_precision_cholesky(
self.covariances_, self.covariance_type
)
def _e_step(self, X, y, y_hat):
"""E step.
Parameters
----------
X : array-like of shape (n_samples, n_features)
Returns
-------
log_prob_norm : float
Mean of the logarithms of the probabilities of each sample in X
log_responsibility : array, shape (n_samples, n_components)
Logarithm of the posterior probabilities (or responsibilities) of
the point of each sample in X.
"""
log_prob_norm, log_resp = self._estimate_log_prob_resp(X, y, y_hat)
return np.mean(log_prob_norm), log_resp
def _estimate_log_prob_resp(self, X, y=None, y_hat=None):
"""Estimate log probabilities and responsibilities for each sample.
Compute the log probabilities, weighted log probabilities per
component and responsibilities for each sample in X with respect to
the current state of the model.
Parameters
----------
X : array-like of shape (n_samples, n_features)
Returns
-------
log_prob_norm : array, shape (n_samples,)
log p(X)
log_responsibilities : array, shape (n_samples, n_components)
logarithm of the responsibilities
"""
weighted_log_prob = self._estimate_weighted_log_prob(X, y, y_hat)
log_prob_norm = logsumexp(weighted_log_prob, axis=1)
with np.errstate(under="ignore"):
# ignore underflow
log_resp = weighted_log_prob - log_prob_norm[:, np.newaxis]
return log_prob_norm, log_resp
def _estimate_weighted_log_prob(self, X, y=None, y_hat=None):
log_prob = self._estimate_log_prob(X) + self._estimate_log_weights()
if y is not None:
log_prob += self._estimate_y_log_prob(y) * self.y_log_likelihood_weight
if y_hat is not None:
log_prob += (
self._estimate_y_hat_log_prob(y_hat) * self.y_hat_log_likelihood_weight
)
return log_prob
def _get_parameters(self):
return (
self.weights_,
self.means_,
self.covariances_,
self.y_probs,
self.y_hat_probs,
self.precisions_cholesky_,
)
def _set_parameters(self, params):
(
self.weights_,
self.means_,
self.covariances_,
self.y_probs,
self.y_hat_probs,
self.precisions_cholesky_,
) = params
# Attributes computation
_, n_features = self.means_.shape
if self.covariance_type == "full":
self.precisions_ = np.empty(self.precisions_cholesky_.shape)
for k, prec_chol in enumerate(self.precisions_cholesky_):
self.precisions_[k] = np.dot(prec_chol, prec_chol.T)
elif self.covariance_type == "tied":
self.precisions_ = np.dot(
self.precisions_cholesky_, self.precisions_cholesky_.T
)
else:
self.precisions_ = self.precisions_cholesky_ ** 2
def _n_parameters(self):
"""Return the number of free parameters in the model."""
return super()._n_parameters() + 2 * self.n_components
def _estimate_y_log_prob(self, y):
"""Estimate the Gaussian distribution parameters.
Parameters
----------
y: array-like of shape (n_samples, n_classes)
y_hat: array-like of shpae (n_samples, n_classes)
"""
# add epsilon to avoid "RuntimeWarning: divide by zero encountered in log"
return np.log(np.dot(y, self.y_probs.T) + np.finfo(self.y_probs.dtype).eps)
def _estimate_y_hat_log_prob(self, y_hat):
"""Estimate the Gaussian distribution parameters.
Parameters
----------
y: array-like of shape (n_samples, n_classes)
y_hat: array-like of shpae (n_samples, n_classes)
"""
# add epsilon to avoid "RuntimeWarning: divide by zero encountered in log"
return np.log(
np.dot(y_hat, self.y_hat_probs.T) + np.finfo(self.y_hat_probs.dtype).eps
)
def _estimate_parameters(X, y, y_hat, resp, reg_covar, covariance_type):
"""Estimate the Gaussian distribution parameters.
Parameters
----------
X : array-like of shape (n_samples, n_features)
The input data array.
y: array-like of shape (n_samples, n_classes)
y_hat: array-like of shpae (n_samples, n_classes)
resp : array-like of shape (n_samples, n_components)
The responsibilities for each data sample in X.
reg_covar : float
The regularization added to the diagonal of the covariance matrices.
covariance_type : {'full', 'tied', 'diag', 'spherical'}
The type of precision matrices.
Returns
-------
nk : array-like of shape (n_components,)
The numbers of data samples in the current components.
means : array-like of shape (n_components, n_features)
The centers of the current components.
covariances : array-like
The covariance matrix of the current components.
The shape depends of the covariance_type.
"""
nk = resp.sum(axis=0) + 10 * np.finfo(resp.dtype).eps # (n_components, )
means = np.dot(resp.T, X) / nk[:, np.newaxis]
covariances = {
"full": _estimate_gaussian_covariances_full,
"tied": _estimate_gaussian_covariances_tied,
"diag": _estimate_gaussian_covariances_diag,
"spherical": _estimate_gaussian_covariances_spherical,
}[covariance_type](resp, X, nk, means, reg_covar)
if y is not None:
y_probs = np.dot(resp.T, y) / nk[:, np.newaxis] # (n_components, n_classes)
else:
y_probs = None
if y_hat is not None:
y_hat_probs = np.dot(resp.T, y_hat) / nk[:, np.newaxis] # (n_components, n_classes)
else:
y_hat_probs = None
return nk, means, covariances, y_probs, y_hat_probs
| 30,667 | 39.405797 | 141 | py |
robust-transformers | robust-transformers-main/examples/pytorch/summarization/run_summarization_no_trainer.py | #!/usr/bin/env python
# coding=utf-8
# Copyright The HuggingFace Team and The HuggingFace Inc. team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
"""
Fine-tuning a 🤗 Transformers model on summarization.
"""
# You can also adapt this script on your own summarization task. Pointers for this are left as comments.
import argparse
import logging
import math
import os
import random
from pathlib import Path
import datasets
import nltk
import numpy as np
import torch
from datasets import load_dataset, load_metric
from torch.utils.data import DataLoader
from tqdm.auto import tqdm
import transformers
from accelerate import Accelerator
from filelock import FileLock
from huggingface_hub import Repository
from transformers import (
CONFIG_MAPPING,
MODEL_MAPPING,
AdamW,
AutoConfig,
AutoModelForSeq2SeqLM,
AutoTokenizer,
DataCollatorForSeq2Seq,
SchedulerType,
get_scheduler,
set_seed,
)
from transformers.file_utils import get_full_repo_name, is_offline_mode
from transformers.utils.versions import require_version
logger = logging.getLogger(__name__)
require_version("datasets>=1.8.0", "To fix: pip install -r examples/pytorch/summarization/requirements.txt")
# You should update this to your particular problem to have better documentation of `model_type`
MODEL_CONFIG_CLASSES = list(MODEL_MAPPING.keys())
MODEL_TYPES = tuple(conf.model_type for conf in MODEL_CONFIG_CLASSES)
try:
nltk.data.find("tokenizers/punkt")
except (LookupError, OSError):
if is_offline_mode():
raise LookupError(
"Offline mode: run this script without TRANSFORMERS_OFFLINE first to download nltk data files"
)
with FileLock(".lock") as lock:
nltk.download("punkt", quiet=True)
summarization_name_mapping = {
"amazon_reviews_multi": ("review_body", "review_title"),
"big_patent": ("description", "abstract"),
"cnn_dailymail": ("article", "highlights"),
"orange_sum": ("text", "summary"),
"pn_summary": ("article", "summary"),
"psc": ("extract_text", "summary_text"),
"samsum": ("dialogue", "summary"),
"thaisum": ("body", "summary"),
"xglue": ("news_body", "news_title"),
"xsum": ("document", "summary"),
"wiki_summary": ("article", "highlights"),
}
def parse_args():
parser = argparse.ArgumentParser(description="Finetune a transformers model on a summarization task")
parser.add_argument(
"--dataset_name",
type=str,
default=None,
help="The name of the dataset to use (via the datasets library).",
)
parser.add_argument(
"--dataset_config_name",
type=str,
default=None,
help="The configuration name of the dataset to use (via the datasets library).",
)
parser.add_argument(
"--train_file", type=str, default=None, help="A csv or a json file containing the training data."
)
parser.add_argument(
"--validation_file", type=str, default=None, help="A csv or a json file containing the validation data."
)
parser.add_argument(
"--ignore_pad_token_for_loss",
type=bool,
default=True,
help="Whether to ignore the tokens corresponding to " "padded labels in the loss computation or not.",
)
parser.add_argument(
"--max_source_length",
type=int,
default=1024,
help="The maximum total input sequence length after "
"tokenization.Sequences longer than this will be truncated, sequences shorter will be padded.",
)
parser.add_argument(
"--source_prefix",
type=str,
default=None,
help="A prefix to add before every source text " "(useful for T5 models).",
)
parser.add_argument(
"--preprocessing_num_workers",
type=int,
default=None,
help="The number of processes to use for the preprocessing.",
)
parser.add_argument(
"--overwrite_cache", type=bool, default=None, help="Overwrite the cached training and evaluation sets"
)
parser.add_argument(
"--max_target_length",
type=int,
default=128,
help="The maximum total sequence length for target text after "
"tokenization. Sequences longer than this will be truncated, sequences shorter will be padded."
"during ``evaluate`` and ``predict``.",
)
parser.add_argument(
"--val_max_target_length",
type=int,
default=None,
help="The maximum total sequence length for validation "
"target text after tokenization.Sequences longer than this will be truncated, sequences shorter will be "
"padded. Will default to `max_target_length`.This argument is also used to override the ``max_length`` "
"param of ``model.generate``, which is used during ``evaluate`` and ``predict``.",
)
parser.add_argument(
"--max_length",
type=int,
default=128,
help=(
"The maximum total input sequence length after tokenization. Sequences longer than this will be truncated,"
" sequences shorter will be padded if `--pad_to_max_lengh` is passed."
),
)
parser.add_argument(
"--num_beams",
type=int,
default=None,
help="Number of beams to use for evaluation. This argument will be "
"passed to ``model.generate``, which is used during ``evaluate`` and ``predict``.",
)
parser.add_argument(
"--pad_to_max_length",
action="store_true",
help="If passed, pad all samples to `max_length`. Otherwise, dynamic padding is used.",
)
parser.add_argument(
"--model_name_or_path",
type=str,
help="Path to pretrained model or model identifier from huggingface.co/models.",
required=True,
)
parser.add_argument(
"--config_name",
type=str,
default=None,
help="Pretrained config name or path if not the same as model_name",
)
parser.add_argument(
"--tokenizer_name",
type=str,
default=None,
help="Pretrained tokenizer name or path if not the same as model_name",
)
parser.add_argument(
"--text_column",
type=str,
default=None,
help="The name of the column in the datasets containing the full texts (for summarization).",
)
parser.add_argument(
"--summary_column",
type=str,
default=None,
help="The name of the column in the datasets containing the summaries (for summarization).",
)
parser.add_argument(
"--use_slow_tokenizer",
action="store_true",
help="If passed, will use a slow tokenizer (not backed by the 🤗 Tokenizers library).",
)
parser.add_argument(
"--per_device_train_batch_size",
type=int,
default=8,
help="Batch size (per device) for the training dataloader.",
)
parser.add_argument(
"--per_device_eval_batch_size",
type=int,
default=8,
help="Batch size (per device) for the evaluation dataloader.",
)
parser.add_argument(
"--learning_rate",
type=float,
default=5e-5,
help="Initial learning rate (after the potential warmup period) to use.",
)
parser.add_argument("--weight_decay", type=float, default=0.0, help="Weight decay to use.")
parser.add_argument("--num_train_epochs", type=int, default=3, help="Total number of training epochs to perform.")
parser.add_argument(
"--max_train_steps",
type=int,
default=None,
help="Total number of training steps to perform. If provided, overrides num_train_epochs.",
)
parser.add_argument(
"--gradient_accumulation_steps",
type=int,
default=1,
help="Number of updates steps to accumulate before performing a backward/update pass.",
)
parser.add_argument(
"--lr_scheduler_type",
type=SchedulerType,
default="linear",
help="The scheduler type to use.",
choices=["linear", "cosine", "cosine_with_restarts", "polynomial", "constant", "constant_with_warmup"],
)
parser.add_argument(
"--num_warmup_steps", type=int, default=0, help="Number of steps for the warmup in the lr scheduler."
)
parser.add_argument("--output_dir", type=str, default=None, help="Where to store the final model.")
parser.add_argument("--seed", type=int, default=None, help="A seed for reproducible training.")
parser.add_argument(
"--model_type",
type=str,
default=None,
help="Model type to use if training from scratch.",
choices=MODEL_TYPES,
)
parser.add_argument("--push_to_hub", action="store_true", help="Whether or not to push the model to the Hub.")
parser.add_argument(
"--hub_model_id", type=str, help="The name of the repository to keep in sync with the local `output_dir`."
)
parser.add_argument("--hub_token", type=str, help="The token to use to push to the Model Hub.")
args = parser.parse_args()
# Sanity checks
if args.dataset_name is None and args.train_file is None and args.validation_file is None:
raise ValueError("Need either a dataset name or a training/validation file.")
else:
if args.train_file is not None:
extension = args.train_file.split(".")[-1]
assert extension in ["csv", "json"], "`train_file` should be a csv or a json file."
if args.validation_file is not None:
extension = args.validation_file.split(".")[-1]
assert extension in ["csv", "json"], "`validation_file` should be a csv or a json file."
if args.push_to_hub:
assert args.output_dir is not None, "Need an `output_dir` to create a repo when `--push_to_hub` is passed."
return args
def main():
args = parse_args()
if args.source_prefix is None and args.model_name_or_path in [
"t5-small",
"t5-base",
"t5-large",
"t5-3b",
"t5-11b",
]:
logger.warning(
"You're running a t5 model but didn't provide a source prefix, which is the expected, e.g. with "
"`--source_prefix 'summarize: ' `"
)
# Initialize the accelerator. We will let the accelerator handle device placement for us in this example.
accelerator = Accelerator()
# Make one log on every process with the configuration for debugging.
logging.basicConfig(
format="%(asctime)s - %(levelname)s - %(name)s - %(message)s",
datefmt="%m/%d/%Y %H:%M:%S",
level=logging.INFO,
)
logger.info(accelerator.state)
# Setup logging, we only want one process per machine to log things on the screen.
# accelerator.is_local_main_process is only True for one process per machine.
logger.setLevel(logging.INFO if accelerator.is_local_main_process else logging.ERROR)
if accelerator.is_local_main_process:
datasets.utils.logging.set_verbosity_warning()
transformers.utils.logging.set_verbosity_info()
else:
datasets.utils.logging.set_verbosity_error()
transformers.utils.logging.set_verbosity_error()
# If passed along, set the training seed now.
if args.seed is not None:
set_seed(args.seed)
# Handle the repository creation
if accelerator.is_main_process:
if args.push_to_hub:
if args.hub_model_id is None:
repo_name = get_full_repo_name(Path(args.output_dir).name, token=args.hub_token)
else:
repo_name = args.hub_model_id
repo = Repository(args.output_dir, clone_from=repo_name)
elif args.output_dir is not None:
os.makedirs(args.output_dir, exist_ok=True)
accelerator.wait_for_everyone()
# Get the datasets: you can either provide your own CSV/JSON/TXT training and evaluation files (see below)
# or just provide the name of one of the public datasets available on the hub at https://huggingface.co/datasets/
# (the dataset will be downloaded automatically from the datasets Hub).
#
# For CSV/JSON files, this script will use the column called 'text' or the first column if no column called
# 'text' is found. You can easily tweak this behavior (see below).
#
# In distributed training, the load_dataset function guarantee that only one local process can concurrently
# download the dataset.
if args.dataset_name is not None:
# Downloading and loading a dataset from the hub.
raw_datasets = load_dataset(args.dataset_name, args.dataset_config_name)
else:
data_files = {}
if args.train_file is not None:
data_files["train"] = args.train_file
if args.validation_file is not None:
data_files["validation"] = args.validation_file
extension = args.train_file.split(".")[-1]
raw_datasets = load_dataset(extension, data_files=data_files)
# See more about loading any type of standard or custom dataset (from files, python dict, pandas DataFrame, etc) at
# https://huggingface.co/docs/datasets/loading_datasets.html.
# Load pretrained model and tokenizer
#
# In distributed training, the .from_pretrained methods guarantee that only one local process can concurrently
# download model & vocab.
if args.config_name:
config = AutoConfig.from_pretrained(args.config_name)
elif args.model_name_or_path:
config = AutoConfig.from_pretrained(args.model_name_or_path)
else:
config = CONFIG_MAPPING[args.model_type]()
logger.warning("You are instantiating a new config instance from scratch.")
if args.tokenizer_name:
tokenizer = AutoTokenizer.from_pretrained(args.tokenizer_name, use_fast=not args.use_slow_tokenizer)
elif args.model_name_or_path:
tokenizer = AutoTokenizer.from_pretrained(args.model_name_or_path, use_fast=not args.use_slow_tokenizer)
else:
raise ValueError(
"You are instantiating a new tokenizer from scratch. This is not supported by this script."
"You can do it from another script, save it, and load it from here, using --tokenizer_name."
)
if args.model_name_or_path:
model = AutoModelForSeq2SeqLM.from_pretrained(
args.model_name_or_path,
from_tf=bool(".ckpt" in args.model_name_or_path),
config=config,
)
else:
logger.info("Training new model from scratch")
model = AutoModelForSeq2SeqLM.from_config(config)
model.resize_token_embeddings(len(tokenizer))
if model.config.decoder_start_token_id is None:
raise ValueError("Make sure that `config.decoder_start_token_id` is correctly defined")
prefix = args.source_prefix if args.source_prefix is not None else ""
# Preprocessing the datasets.
# First we tokenize all the texts.
column_names = raw_datasets["train"].column_names
# Get the column names for input/target.
dataset_columns = summarization_name_mapping.get(args.dataset_name, None)
if args.text_column is None:
text_column = dataset_columns[0] if dataset_columns is not None else column_names[0]
else:
text_column = args.text_column
if text_column not in column_names:
raise ValueError(
f"--text_column' value '{args.text_column}' needs to be one of: {', '.join(column_names)}"
)
if args.summary_column is None:
summary_column = dataset_columns[1] if dataset_columns is not None else column_names[1]
else:
summary_column = args.summary_column
if summary_column not in column_names:
raise ValueError(
f"--summary_column' value '{args.summary_column}' needs to be one of: {', '.join(column_names)}"
)
# Temporarily set max_target_length for training.
max_target_length = args.max_target_length
padding = "max_length" if args.pad_to_max_length else False
def preprocess_function(examples):
inputs = examples[text_column]
targets = examples[summary_column]
inputs = [prefix + inp for inp in inputs]
model_inputs = tokenizer(inputs, max_length=args.max_source_length, padding=padding, truncation=True)
# Setup the tokenizer for targets
with tokenizer.as_target_tokenizer():
labels = tokenizer(targets, max_length=max_target_length, padding=padding, truncation=True)
# If we are padding here, replace all tokenizer.pad_token_id in the labels by -100 when we want to ignore
# padding in the loss.
if padding == "max_length" and args.ignore_pad_token_for_loss:
labels["input_ids"] = [
[(l if l != tokenizer.pad_token_id else -100) for l in label] for label in labels["input_ids"]
]
model_inputs["labels"] = labels["input_ids"]
return model_inputs
with accelerator.main_process_first():
processed_datasets = raw_datasets.map(
preprocess_function,
batched=True,
num_proc=args.preprocessing_num_workers,
remove_columns=column_names,
load_from_cache_file=not args.overwrite_cache,
desc="Running tokenizer on dataset",
)
train_dataset = processed_datasets["train"]
eval_dataset = processed_datasets["validation"]
# Log a few random samples from the training set:
for index in random.sample(range(len(train_dataset)), 1):
logger.info(f"Sample {index} of the training set: {train_dataset[index]}.")
label_pad_token_id = -100 if args.ignore_pad_token_for_loss else tokenizer.pad_token_id
data_collator = DataCollatorForSeq2Seq(
tokenizer,
model=model,
label_pad_token_id=label_pad_token_id,
pad_to_multiple_of=8 if accelerator.use_fp16 else None,
)
def postprocess_text(preds, labels):
preds = [pred.strip() for pred in preds]
labels = [label.strip() for label in labels]
# rougeLSum expects newline after each sentence
preds = ["\n".join(nltk.sent_tokenize(pred)) for pred in preds]
labels = ["\n".join(nltk.sent_tokenize(label)) for label in labels]
return preds, labels
train_dataloader = DataLoader(
train_dataset, shuffle=True, collate_fn=data_collator, batch_size=args.per_device_train_batch_size
)
eval_dataloader = DataLoader(eval_dataset, collate_fn=data_collator, batch_size=args.per_device_eval_batch_size)
# Optimizer
# Split weights in two groups, one with weight decay and the other not.
no_decay = ["bias", "LayerNorm.weight"]
optimizer_grouped_parameters = [
{
"params": [p for n, p in model.named_parameters() if not any(nd in n for nd in no_decay)],
"weight_decay": args.weight_decay,
},
{
"params": [p for n, p in model.named_parameters() if any(nd in n for nd in no_decay)],
"weight_decay": 0.0,
},
]
optimizer = AdamW(optimizer_grouped_parameters, lr=args.learning_rate)
# Prepare everything with our `accelerator`.
model, optimizer, train_dataloader, eval_dataloader = accelerator.prepare(
model, optimizer, train_dataloader, eval_dataloader
)
# Note -> the training dataloader needs to be prepared before we grab his length below (cause its length will be
# shorter in multiprocess)
# Scheduler and math around the number of training steps.
num_update_steps_per_epoch = math.ceil(len(train_dataloader) / args.gradient_accumulation_steps)
if args.max_train_steps is None:
args.max_train_steps = args.num_train_epochs * num_update_steps_per_epoch
else:
args.num_train_epochs = math.ceil(args.max_train_steps / num_update_steps_per_epoch)
lr_scheduler = get_scheduler(
name=args.lr_scheduler_type,
optimizer=optimizer,
num_warmup_steps=args.num_warmup_steps,
num_training_steps=args.max_train_steps,
)
# Metric
metric = load_metric("rouge")
# Train!
total_batch_size = args.per_device_train_batch_size * accelerator.num_processes * args.gradient_accumulation_steps
logger.info("***** Running training *****")
logger.info(f" Num examples = {len(train_dataset)}")
logger.info(f" Num Epochs = {args.num_train_epochs}")
logger.info(f" Instantaneous batch size per device = {args.per_device_train_batch_size}")
logger.info(f" Total train batch size (w. parallel, distributed & accumulation) = {total_batch_size}")
logger.info(f" Gradient Accumulation steps = {args.gradient_accumulation_steps}")
logger.info(f" Total optimization steps = {args.max_train_steps}")
# Only show the progress bar once on each machine.
progress_bar = tqdm(range(args.max_train_steps), disable=not accelerator.is_local_main_process)
completed_steps = 0
for epoch in range(args.num_train_epochs):
model.train()
for step, batch in enumerate(train_dataloader):
outputs = model(**batch)
loss = outputs.loss
loss = loss / args.gradient_accumulation_steps
accelerator.backward(loss)
if step % args.gradient_accumulation_steps == 0 or step == len(train_dataloader) - 1:
optimizer.step()
lr_scheduler.step()
optimizer.zero_grad()
progress_bar.update(1)
completed_steps += 1
if completed_steps >= args.max_train_steps:
break
model.eval()
if args.val_max_target_length is None:
args.val_max_target_length = args.max_target_length
gen_kwargs = {
"max_length": args.val_max_target_length if args is not None else config.max_length,
"num_beams": args.num_beams,
}
for step, batch in enumerate(eval_dataloader):
with torch.no_grad():
generated_tokens = accelerator.unwrap_model(model).generate(
batch["input_ids"],
attention_mask=batch["attention_mask"],
**gen_kwargs,
)
generated_tokens = accelerator.pad_across_processes(
generated_tokens, dim=1, pad_index=tokenizer.pad_token_id
)
labels = batch["labels"]
if not args.pad_to_max_length:
# If we did not pad to max length, we need to pad the labels too
labels = accelerator.pad_across_processes(batch["labels"], dim=1, pad_index=tokenizer.pad_token_id)
generated_tokens = accelerator.gather(generated_tokens).cpu().numpy()
labels = accelerator.gather(labels).cpu().numpy()
if args.ignore_pad_token_for_loss:
# Replace -100 in the labels as we can't decode them.
labels = np.where(labels != -100, labels, tokenizer.pad_token_id)
if isinstance(generated_tokens, tuple):
generated_tokens = generated_tokens[0]
decoded_preds = tokenizer.batch_decode(generated_tokens, skip_special_tokens=True)
decoded_labels = tokenizer.batch_decode(labels, skip_special_tokens=True)
decoded_preds, decoded_labels = postprocess_text(decoded_preds, decoded_labels)
metric.add_batch(predictions=decoded_preds, references=decoded_labels)
result = metric.compute(use_stemmer=True)
# Extract a few results from ROUGE
result = {key: value.mid.fmeasure * 100 for key, value in result.items()}
result = {k: round(v, 4) for k, v in result.items()}
logger.info(result)
if args.push_to_hub and epoch < args.num_train_epochs - 1:
accelerator.wait_for_everyone()
unwrapped_model = accelerator.unwrap_model(model)
unwrapped_model.save_pretrained(args.output_dir, save_function=accelerator.save)
if accelerator.is_main_process:
tokenizer.save_pretrained(args.output_dir)
repo.push_to_hub(
commit_message=f"Training in progress epoch {epoch}", blocking=False, auto_lfs_prune=True
)
if args.output_dir is not None:
accelerator.wait_for_everyone()
unwrapped_model = accelerator.unwrap_model(model)
unwrapped_model.save_pretrained(args.output_dir, save_function=accelerator.save)
if accelerator.is_main_process:
tokenizer.save_pretrained(args.output_dir)
if args.push_to_hub:
repo.push_to_hub(commit_message="End of training", auto_lfs_prune=True)
if __name__ == "__main__":
main()
| 25,382 | 39.874396 | 119 | py |
robust-transformers | robust-transformers-main/examples/pytorch/summarization/run_summarization.py | #!/usr/bin/env python
# coding=utf-8
# Copyright 2021 The HuggingFace Team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
"""
Fine-tuning the library models for sequence to sequence.
"""
# You can also adapt this script on your own sequence to sequence task. Pointers for this are left as comments.
import logging
import os
import sys
from dataclasses import dataclass, field
from typing import Optional
import datasets
import nltk # Here to have a nice missing dependency error message early on
import numpy as np
from datasets import load_dataset, load_metric
import transformers
from filelock import FileLock
from transformers import (
AutoConfig,
AutoModelForSeq2SeqLM,
AutoTokenizer,
DataCollatorForSeq2Seq,
HfArgumentParser,
MBart50Tokenizer,
MBart50TokenizerFast,
MBartTokenizer,
MBartTokenizerFast,
Seq2SeqTrainer,
Seq2SeqTrainingArguments,
set_seed,
)
from transformers.file_utils import is_offline_mode
from transformers.trainer_utils import get_last_checkpoint
from transformers.utils import check_min_version
from transformers.utils.versions import require_version
# Will error if the minimal version of Transformers is not installed. Remove at your own risks.
check_min_version("4.18.0.dev0")
require_version("datasets>=1.8.0", "To fix: pip install -r examples/pytorch/summarization/requirements.txt")
logger = logging.getLogger(__name__)
try:
nltk.data.find("tokenizers/punkt")
except (LookupError, OSError):
if is_offline_mode():
raise LookupError(
"Offline mode: run this script without TRANSFORMERS_OFFLINE first to download nltk data files"
)
with FileLock(".lock") as lock:
nltk.download("punkt", quiet=True)
# A list of all multilingual tokenizer which require lang attribute.
MULTILINGUAL_TOKENIZERS = [MBartTokenizer, MBartTokenizerFast, MBart50Tokenizer, MBart50TokenizerFast]
@dataclass
class ModelArguments:
"""
Arguments pertaining to which model/config/tokenizer we are going to fine-tune from.
"""
model_name_or_path: str = field(
metadata={"help": "Path to pretrained model or model identifier from huggingface.co/models"}
)
config_name: Optional[str] = field(
default=None, metadata={"help": "Pretrained config name or path if not the same as model_name"}
)
tokenizer_name: Optional[str] = field(
default=None, metadata={"help": "Pretrained tokenizer name or path if not the same as model_name"}
)
cache_dir: Optional[str] = field(
default=None,
metadata={"help": "Where to store the pretrained models downloaded from huggingface.co"},
)
use_fast_tokenizer: bool = field(
default=True,
metadata={"help": "Whether to use one of the fast tokenizer (backed by the tokenizers library) or not."},
)
model_revision: str = field(
default="main",
metadata={"help": "The specific model version to use (can be a branch name, tag name or commit id)."},
)
use_auth_token: bool = field(
default=False,
metadata={
"help": "Will use the token generated when running `transformers-cli login` (necessary to use this script "
"with private models)."
},
)
resize_position_embeddings: Optional[bool] = field(
default=None,
metadata={
"help": "Whether to automatically resize the position embeddings if `max_source_length` exceeds "
"the model's position embeddings."
},
)
@dataclass
class DataTrainingArguments:
"""
Arguments pertaining to what data we are going to input our model for training and eval.
"""
lang: str = field(default=None, metadata={"help": "Language id for summarization."})
dataset_name: Optional[str] = field(
default=None, metadata={"help": "The name of the dataset to use (via the datasets library)."}
)
dataset_config_name: Optional[str] = field(
default=None, metadata={"help": "The configuration name of the dataset to use (via the datasets library)."}
)
text_column: Optional[str] = field(
default=None,
metadata={"help": "The name of the column in the datasets containing the full texts (for summarization)."},
)
summary_column: Optional[str] = field(
default=None,
metadata={"help": "The name of the column in the datasets containing the summaries (for summarization)."},
)
train_file: Optional[str] = field(
default=None, metadata={"help": "The input training data file (a jsonlines or csv file)."}
)
validation_file: Optional[str] = field(
default=None,
metadata={
"help": "An optional input evaluation data file to evaluate the metrics (rouge) on "
"(a jsonlines or csv file)."
},
)
test_file: Optional[str] = field(
default=None,
metadata={
"help": "An optional input test data file to evaluate the metrics (rouge) on " "(a jsonlines or csv file)."
},
)
overwrite_cache: bool = field(
default=False, metadata={"help": "Overwrite the cached training and evaluation sets"}
)
preprocessing_num_workers: Optional[int] = field(
default=None,
metadata={"help": "The number of processes to use for the preprocessing."},
)
max_source_length: Optional[int] = field(
default=1024,
metadata={
"help": "The maximum total input sequence length after tokenization. Sequences longer "
"than this will be truncated, sequences shorter will be padded."
},
)
max_target_length: Optional[int] = field(
default=128,
metadata={
"help": "The maximum total sequence length for target text after tokenization. Sequences longer "
"than this will be truncated, sequences shorter will be padded."
},
)
val_max_target_length: Optional[int] = field(
default=None,
metadata={
"help": "The maximum total sequence length for validation target text after tokenization. Sequences longer "
"than this will be truncated, sequences shorter will be padded. Will default to `max_target_length`."
"This argument is also used to override the ``max_length`` param of ``model.generate``, which is used "
"during ``evaluate`` and ``predict``."
},
)
pad_to_max_length: bool = field(
default=False,
metadata={
"help": "Whether to pad all samples to model maximum sentence length. "
"If False, will pad the samples dynamically when batching to the maximum length in the batch. More "
"efficient on GPU but very bad for TPU."
},
)
max_train_samples: Optional[int] = field(
default=None,
metadata={
"help": "For debugging purposes or quicker training, truncate the number of training examples to this "
"value if set."
},
)
max_eval_samples: Optional[int] = field(
default=None,
metadata={
"help": "For debugging purposes or quicker training, truncate the number of evaluation examples to this "
"value if set."
},
)
max_predict_samples: Optional[int] = field(
default=None,
metadata={
"help": "For debugging purposes or quicker training, truncate the number of prediction examples to this "
"value if set."
},
)
num_beams: Optional[int] = field(
default=None,
metadata={
"help": "Number of beams to use for evaluation. This argument will be passed to ``model.generate``, "
"which is used during ``evaluate`` and ``predict``."
},
)
ignore_pad_token_for_loss: bool = field(
default=True,
metadata={
"help": "Whether to ignore the tokens corresponding to padded labels in the loss computation or not."
},
)
source_prefix: Optional[str] = field(
default="", metadata={"help": "A prefix to add before every source text (useful for T5 models)."}
)
forced_bos_token: Optional[str] = field(
default=None,
metadata={
"help": "The token to force as the first generated token after the decoder_start_token_id."
"Useful for multilingual models like mBART where the first generated token"
"needs to be the target language token (Usually it is the target language token)"
},
)
def __post_init__(self):
if self.dataset_name is None and self.train_file is None and self.validation_file is None:
raise ValueError("Need either a dataset name or a training/validation file.")
else:
if self.train_file is not None:
extension = self.train_file.split(".")[-1]
assert extension in ["csv", "json"], "`train_file` should be a csv or a json file."
if self.validation_file is not None:
extension = self.validation_file.split(".")[-1]
assert extension in ["csv", "json"], "`validation_file` should be a csv or a json file."
if self.val_max_target_length is None:
self.val_max_target_length = self.max_target_length
summarization_name_mapping = {
"amazon_reviews_multi": ("review_body", "review_title"),
"big_patent": ("description", "abstract"),
"cnn_dailymail": ("article", "highlights"),
"orange_sum": ("text", "summary"),
"pn_summary": ("article", "summary"),
"psc": ("extract_text", "summary_text"),
"samsum": ("dialogue", "summary"),
"thaisum": ("body", "summary"),
"xglue": ("news_body", "news_title"),
"xsum": ("document", "summary"),
"wiki_summary": ("article", "highlights"),
}
def main():
# See all possible arguments in src/transformers/training_args.py
# or by passing the --help flag to this script.
# We now keep distinct sets of args, for a cleaner separation of concerns.
parser = HfArgumentParser((ModelArguments, DataTrainingArguments, Seq2SeqTrainingArguments))
if len(sys.argv) == 2 and sys.argv[1].endswith(".json"):
# If we pass only one argument to the script and it's the path to a json file,
# let's parse it to get our arguments.
model_args, data_args, training_args = parser.parse_json_file(json_file=os.path.abspath(sys.argv[1]))
else:
model_args, data_args, training_args = parser.parse_args_into_dataclasses()
# Setup logging
logging.basicConfig(
format="%(asctime)s - %(levelname)s - %(name)s - %(message)s",
datefmt="%m/%d/%Y %H:%M:%S",
handlers=[logging.StreamHandler(sys.stdout)],
)
log_level = training_args.get_process_log_level()
logger.setLevel(log_level)
datasets.utils.logging.set_verbosity(log_level)
transformers.utils.logging.set_verbosity(log_level)
transformers.utils.logging.enable_default_handler()
transformers.utils.logging.enable_explicit_format()
# Log on each process the small summary:
logger.warning(
f"Process rank: {training_args.local_rank}, device: {training_args.device}, n_gpu: {training_args.n_gpu}"
+ f"distributed training: {bool(training_args.local_rank != -1)}, 16-bits training: {training_args.fp16}"
)
logger.info(f"Training/evaluation parameters {training_args}")
if data_args.source_prefix is None and model_args.model_name_or_path in [
"t5-small",
"t5-base",
"t5-large",
"t5-3b",
"t5-11b",
]:
logger.warning(
"You're running a t5 model but didn't provide a source prefix, which is the expected, e.g. with "
"`--source_prefix 'summarize: ' `"
)
# Detecting last checkpoint.
last_checkpoint = None
if os.path.isdir(training_args.output_dir) and training_args.do_train and not training_args.overwrite_output_dir:
last_checkpoint = get_last_checkpoint(training_args.output_dir)
if last_checkpoint is None and len(os.listdir(training_args.output_dir)) > 0:
raise ValueError(
f"Output directory ({training_args.output_dir}) already exists and is not empty. "
"Use --overwrite_output_dir to overcome."
)
elif last_checkpoint is not None and training_args.resume_from_checkpoint is None:
logger.info(
f"Checkpoint detected, resuming training at {last_checkpoint}. To avoid this behavior, change "
"the `--output_dir` or add `--overwrite_output_dir` to train from scratch."
)
# Set seed before initializing model.
set_seed(training_args.seed)
# Get the datasets: you can either provide your own CSV/JSON training and evaluation files (see below)
# or just provide the name of one of the public datasets available on the hub at https://huggingface.co/datasets/
# (the dataset will be downloaded automatically from the datasets Hub).
#
# For CSV/JSON files this script will use the first column for the full texts and the second column for the
# summaries (unless you specify column names for this with the `text_column` and `summary_column` arguments).
#
# In distributed training, the load_dataset function guarantee that only one local process can concurrently
# download the dataset.
if data_args.dataset_name is not None:
# Downloading and loading a dataset from the hub.
raw_datasets = load_dataset(
data_args.dataset_name, data_args.dataset_config_name, cache_dir=model_args.cache_dir
)
else:
data_files = {}
if data_args.train_file is not None:
data_files["train"] = data_args.train_file
extension = data_args.train_file.split(".")[-1]
if data_args.validation_file is not None:
data_files["validation"] = data_args.validation_file
extension = data_args.validation_file.split(".")[-1]
if data_args.test_file is not None:
data_files["test"] = data_args.test_file
extension = data_args.test_file.split(".")[-1]
raw_datasets = load_dataset(extension, data_files=data_files, cache_dir=model_args.cache_dir)
# See more about loading any type of standard or custom dataset (from files, python dict, pandas DataFrame, etc) at
# https://huggingface.co/docs/datasets/loading_datasets.html.
# Load pretrained model and tokenizer
#
# Distributed training:
# The .from_pretrained methods guarantee that only one local process can concurrently
# download model & vocab.
config = AutoConfig.from_pretrained(
model_args.config_name if model_args.config_name else model_args.model_name_or_path,
cache_dir=model_args.cache_dir,
revision=model_args.model_revision,
use_auth_token=True if model_args.use_auth_token else None,
)
tokenizer = AutoTokenizer.from_pretrained(
model_args.tokenizer_name if model_args.tokenizer_name else model_args.model_name_or_path,
cache_dir=model_args.cache_dir,
use_fast=model_args.use_fast_tokenizer,
revision=model_args.model_revision,
use_auth_token=True if model_args.use_auth_token else None,
)
model = AutoModelForSeq2SeqLM.from_pretrained(
model_args.model_name_or_path,
from_tf=bool(".ckpt" in model_args.model_name_or_path),
config=config,
cache_dir=model_args.cache_dir,
revision=model_args.model_revision,
use_auth_token=True if model_args.use_auth_token else None,
)
model.resize_token_embeddings(len(tokenizer))
if model.config.decoder_start_token_id is None and isinstance(tokenizer, (MBartTokenizer, MBartTokenizerFast)):
if isinstance(tokenizer, MBartTokenizer):
model.config.decoder_start_token_id = tokenizer.lang_code_to_id[data_args.lang]
else:
model.config.decoder_start_token_id = tokenizer.convert_tokens_to_ids(data_args.lang)
if model.config.decoder_start_token_id is None:
raise ValueError("Make sure that `config.decoder_start_token_id` is correctly defined")
if (
hasattr(model.config, "max_position_embeddings")
and model.config.max_position_embeddings < data_args.max_source_length
):
if model_args.resize_position_embeddings is None:
logger.warning(
f"Increasing the model's number of position embedding vectors from {model.config.max_position_embeddings} "
f"to {data_args.max_source_length}."
)
model.resize_position_embeddings(data_args.max_source_length)
elif model_args.resize_position_embeddings:
model.resize_position_embeddings(data_args.max_source_length)
else:
raise ValueError(
f"`--max_source_length` is set to {data_args.max_source_length}, but the model only has {model.config.max_position_embeddings}"
f" position encodings. Consider either reducing `--max_source_length` to {model.config.max_position_embeddings} or to automatically "
"resize the model's position encodings by passing `--resize_position_embeddings`."
)
prefix = data_args.source_prefix if data_args.source_prefix is not None else ""
# Preprocessing the datasets.
# We need to tokenize inputs and targets.
if training_args.do_train:
column_names = raw_datasets["train"].column_names
elif training_args.do_eval:
column_names = raw_datasets["validation"].column_names
elif training_args.do_predict:
column_names = raw_datasets["test"].column_names
else:
logger.info("There is nothing to do. Please pass `do_train`, `do_eval` and/or `do_predict`.")
return
if isinstance(tokenizer, tuple(MULTILINGUAL_TOKENIZERS)):
assert (
data_args.lang is not None
), f"{tokenizer.__class__.__name__} is a multilingual tokenizer which requires --lang argument"
tokenizer.src_lang = data_args.lang
tokenizer.tgt_lang = data_args.lang
# For multilingual translation models like mBART-50 and M2M100 we need to force the target language token
# as the first generated token. We ask the user to explicitly provide this as --forced_bos_token argument.
forced_bos_token_id = (
tokenizer.lang_code_to_id[data_args.forced_bos_token] if data_args.forced_bos_token is not None else None
)
model.config.forced_bos_token_id = forced_bos_token_id
# Get the column names for input/target.
dataset_columns = summarization_name_mapping.get(data_args.dataset_name, None)
if data_args.text_column is None:
text_column = dataset_columns[0] if dataset_columns is not None else column_names[0]
else:
text_column = data_args.text_column
if text_column not in column_names:
raise ValueError(
f"--text_column' value '{data_args.text_column}' needs to be one of: {', '.join(column_names)}"
)
if data_args.summary_column is None:
summary_column = dataset_columns[1] if dataset_columns is not None else column_names[1]
else:
summary_column = data_args.summary_column
if summary_column not in column_names:
raise ValueError(
f"--summary_column' value '{data_args.summary_column}' needs to be one of: {', '.join(column_names)}"
)
# Temporarily set max_target_length for training.
max_target_length = data_args.max_target_length
padding = "max_length" if data_args.pad_to_max_length else False
if training_args.label_smoothing_factor > 0 and not hasattr(model, "prepare_decoder_input_ids_from_labels"):
logger.warning(
"label_smoothing is enabled but the `prepare_decoder_input_ids_from_labels` method is not defined for"
f"`{model.__class__.__name__}`. This will lead to loss being calculated twice and will take up more memory"
)
def preprocess_function(examples):
# remove pairs where at least one record is None
inputs, targets = [], []
for i in range(len(examples[text_column])):
if examples[text_column][i] is not None and examples[summary_column][i] is not None:
inputs.append(examples[text_column][i])
targets.append(examples[summary_column][i])
inputs = [prefix + inp for inp in inputs]
model_inputs = tokenizer(inputs, max_length=data_args.max_source_length, padding=padding, truncation=True)
# Setup the tokenizer for targets
with tokenizer.as_target_tokenizer():
labels = tokenizer(targets, max_length=max_target_length, padding=padding, truncation=True)
# If we are padding here, replace all tokenizer.pad_token_id in the labels by -100 when we want to ignore
# padding in the loss.
if padding == "max_length" and data_args.ignore_pad_token_for_loss:
labels["input_ids"] = [
[(l if l != tokenizer.pad_token_id else -100) for l in label] for label in labels["input_ids"]
]
model_inputs["labels"] = labels["input_ids"]
return model_inputs
if training_args.do_train:
if "train" not in raw_datasets:
raise ValueError("--do_train requires a train dataset")
train_dataset = raw_datasets["train"]
if data_args.max_train_samples is not None:
train_dataset = train_dataset.select(range(data_args.max_train_samples))
with training_args.main_process_first(desc="train dataset map pre-processing"):
train_dataset = train_dataset.map(
preprocess_function,
batched=True,
num_proc=data_args.preprocessing_num_workers,
remove_columns=column_names,
load_from_cache_file=not data_args.overwrite_cache,
desc="Running tokenizer on train dataset",
)
if training_args.do_eval:
max_target_length = data_args.val_max_target_length
if "validation" not in raw_datasets:
raise ValueError("--do_eval requires a validation dataset")
eval_dataset = raw_datasets["validation"]
if data_args.max_eval_samples is not None:
eval_dataset = eval_dataset.select(range(data_args.max_eval_samples))
with training_args.main_process_first(desc="validation dataset map pre-processing"):
eval_dataset = eval_dataset.map(
preprocess_function,
batched=True,
num_proc=data_args.preprocessing_num_workers,
remove_columns=column_names,
load_from_cache_file=not data_args.overwrite_cache,
desc="Running tokenizer on validation dataset",
)
if training_args.do_predict:
max_target_length = data_args.val_max_target_length
if "test" not in raw_datasets:
raise ValueError("--do_predict requires a test dataset")
predict_dataset = raw_datasets["test"]
if data_args.max_predict_samples is not None:
predict_dataset = predict_dataset.select(range(data_args.max_predict_samples))
with training_args.main_process_first(desc="prediction dataset map pre-processing"):
predict_dataset = predict_dataset.map(
preprocess_function,
batched=True,
num_proc=data_args.preprocessing_num_workers,
remove_columns=column_names,
load_from_cache_file=not data_args.overwrite_cache,
desc="Running tokenizer on prediction dataset",
)
# Data collator
label_pad_token_id = -100 if data_args.ignore_pad_token_for_loss else tokenizer.pad_token_id
data_collator = DataCollatorForSeq2Seq(
tokenizer,
model=model,
label_pad_token_id=label_pad_token_id,
pad_to_multiple_of=8 if training_args.fp16 else None,
)
# Metric
metric = load_metric("rouge")
def postprocess_text(preds, labels):
preds = [pred.strip() for pred in preds]
labels = [label.strip() for label in labels]
# rougeLSum expects newline after each sentence
preds = ["\n".join(nltk.sent_tokenize(pred)) for pred in preds]
labels = ["\n".join(nltk.sent_tokenize(label)) for label in labels]
return preds, labels
def compute_metrics(eval_preds):
preds, labels = eval_preds
if isinstance(preds, tuple):
preds = preds[0]
decoded_preds = tokenizer.batch_decode(preds, skip_special_tokens=True)
if data_args.ignore_pad_token_for_loss:
# Replace -100 in the labels as we can't decode them.
labels = np.where(labels != -100, labels, tokenizer.pad_token_id)
decoded_labels = tokenizer.batch_decode(labels, skip_special_tokens=True)
# Some simple post-processing
decoded_preds, decoded_labels = postprocess_text(decoded_preds, decoded_labels)
result = metric.compute(predictions=decoded_preds, references=decoded_labels, use_stemmer=True)
# Extract a few results from ROUGE
result = {key: value.mid.fmeasure * 100 for key, value in result.items()}
prediction_lens = [np.count_nonzero(pred != tokenizer.pad_token_id) for pred in preds]
result["gen_len"] = np.mean(prediction_lens)
result = {k: round(v, 4) for k, v in result.items()}
return result
# Initialize our Trainer
trainer = Seq2SeqTrainer(
model=model,
args=training_args,
train_dataset=train_dataset if training_args.do_train else None,
eval_dataset=eval_dataset if training_args.do_eval else None,
tokenizer=tokenizer,
data_collator=data_collator,
compute_metrics=compute_metrics if training_args.predict_with_generate else None,
)
# Training
if training_args.do_train:
checkpoint = None
if training_args.resume_from_checkpoint is not None:
checkpoint = training_args.resume_from_checkpoint
elif last_checkpoint is not None:
checkpoint = last_checkpoint
train_result = trainer.train(resume_from_checkpoint=checkpoint)
trainer.save_model() # Saves the tokenizer too for easy upload
metrics = train_result.metrics
max_train_samples = (
data_args.max_train_samples if data_args.max_train_samples is not None else len(train_dataset)
)
metrics["train_samples"] = min(max_train_samples, len(train_dataset))
trainer.log_metrics("train", metrics)
trainer.save_metrics("train", metrics)
trainer.save_state()
# Evaluation
results = {}
max_length = (
training_args.generation_max_length
if training_args.generation_max_length is not None
else data_args.val_max_target_length
)
num_beams = data_args.num_beams if data_args.num_beams is not None else training_args.generation_num_beams
if training_args.do_eval:
logger.info("*** Evaluate ***")
metrics = trainer.evaluate(max_length=max_length, num_beams=num_beams, metric_key_prefix="eval")
max_eval_samples = data_args.max_eval_samples if data_args.max_eval_samples is not None else len(eval_dataset)
metrics["eval_samples"] = min(max_eval_samples, len(eval_dataset))
trainer.log_metrics("eval", metrics)
trainer.save_metrics("eval", metrics)
if training_args.do_predict:
logger.info("*** Predict ***")
predict_results = trainer.predict(
predict_dataset, metric_key_prefix="predict", max_length=max_length, num_beams=num_beams
)
metrics = predict_results.metrics
max_predict_samples = (
data_args.max_predict_samples if data_args.max_predict_samples is not None else len(predict_dataset)
)
metrics["predict_samples"] = min(max_predict_samples, len(predict_dataset))
trainer.log_metrics("predict", metrics)
trainer.save_metrics("predict", metrics)
if trainer.is_world_process_zero():
if training_args.predict_with_generate:
predictions = tokenizer.batch_decode(
predict_results.predictions, skip_special_tokens=True, clean_up_tokenization_spaces=True
)
predictions = [pred.strip() for pred in predictions]
output_prediction_file = os.path.join(training_args.output_dir, "generated_predictions.txt")
with open(output_prediction_file, "w") as writer:
writer.write("\n".join(predictions))
kwargs = {"finetuned_from": model_args.model_name_or_path, "tasks": "summarization"}
if data_args.dataset_name is not None:
kwargs["dataset_tags"] = data_args.dataset_name
if data_args.dataset_config_name is not None:
kwargs["dataset_args"] = data_args.dataset_config_name
kwargs["dataset"] = f"{data_args.dataset_name} {data_args.dataset_config_name}"
else:
kwargs["dataset"] = data_args.dataset_name
if data_args.lang is not None:
kwargs["language"] = data_args.lang
if training_args.push_to_hub:
trainer.push_to_hub(**kwargs)
else:
trainer.create_model_card(**kwargs)
return results
def _mp_fn(index):
# For xla_spawn (TPUs)
main()
if __name__ == "__main__":
main()
| 30,199 | 42.328551 | 149 | py |
robust-transformers | robust-transformers-main/examples/pytorch/text-classification/run_glue.py | #!/usr/bin/env python
# coding=utf-8
# Copyright 2020 The HuggingFace Inc. team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
""" Finetuning the library models for sequence classification on GLUE."""
# You can also adapt this script on your own text classification task. Pointers for this are left as comments.
import logging
import os
import random
import sys
from dataclasses import dataclass, field
from typing import Optional
import datasets
import numpy as np
from datasets import load_dataset, load_metric
import transformers
from transformers import (
AutoConfig,
AutoModelForSequenceClassification,
AutoTokenizer,
DataCollatorWithPadding,
EvalPrediction,
HfArgumentParser,
PretrainedConfig,
Trainer,
TrainingArguments,
default_data_collator,
set_seed,
)
from transformers.trainer_utils import get_last_checkpoint
from transformers.utils import check_min_version
from transformers.utils.versions import require_version
# Will error if the minimal version of Transformers is not installed. Remove at your own risks.
check_min_version("4.18.0.dev0")
require_version("datasets>=1.8.0", "To fix: pip install -r examples/pytorch/text-classification/requirements.txt")
task_to_keys = {
"cola": ("sentence", None),
"mnli": ("premise", "hypothesis"),
"mrpc": ("sentence1", "sentence2"),
"qnli": ("question", "sentence"),
"qqp": ("question1", "question2"),
"rte": ("sentence1", "sentence2"),
"sst2": ("sentence", None),
"stsb": ("sentence1", "sentence2"),
"wnli": ("sentence1", "sentence2"),
}
logger = logging.getLogger(__name__)
@dataclass
class DataTrainingArguments:
"""
Arguments pertaining to what data we are going to input our model for training and eval.
Using `HfArgumentParser` we can turn this class
into argparse arguments to be able to specify them on
the command line.
"""
task_name: Optional[str] = field(
default=None,
metadata={"help": "The name of the task to train on: " + ", ".join(task_to_keys.keys())},
)
dataset_name: Optional[str] = field(
default=None, metadata={"help": "The name of the dataset to use (via the datasets library)."}
)
dataset_config_name: Optional[str] = field(
default=None, metadata={"help": "The configuration name of the dataset to use (via the datasets library)."}
)
max_seq_length: int = field(
default=128,
metadata={
"help": "The maximum total input sequence length after tokenization. Sequences longer "
"than this will be truncated, sequences shorter will be padded."
},
)
overwrite_cache: bool = field(
default=False, metadata={"help": "Overwrite the cached preprocessed datasets or not."}
)
pad_to_max_length: bool = field(
default=True,
metadata={
"help": "Whether to pad all samples to `max_seq_length`. "
"If False, will pad the samples dynamically when batching to the maximum length in the batch."
},
)
max_train_samples: Optional[int] = field(
default=None,
metadata={
"help": "For debugging purposes or quicker training, truncate the number of training examples to this "
"value if set."
},
)
max_eval_samples: Optional[int] = field(
default=None,
metadata={
"help": "For debugging purposes or quicker training, truncate the number of evaluation examples to this "
"value if set."
},
)
max_predict_samples: Optional[int] = field(
default=None,
metadata={
"help": "For debugging purposes or quicker training, truncate the number of prediction examples to this "
"value if set."
},
)
train_file: Optional[str] = field(
default=None, metadata={"help": "A csv or a json file containing the training data."}
)
validation_file: Optional[str] = field(
default=None, metadata={"help": "A csv or a json file containing the validation data."}
)
test_file: Optional[str] = field(default=None, metadata={"help": "A csv or a json file containing the test data."})
def __post_init__(self):
if self.task_name is not None:
self.task_name = self.task_name.lower()
if self.task_name not in task_to_keys.keys():
raise ValueError("Unknown task, you should pick one in " + ",".join(task_to_keys.keys()))
elif self.dataset_name is not None:
pass
elif self.train_file is None or self.validation_file is None:
raise ValueError("Need either a GLUE task, a training/validation file or a dataset name.")
else:
train_extension = self.train_file.split(".")[-1]
assert train_extension in ["csv", "json"], "`train_file` should be a csv or a json file."
validation_extension = self.validation_file.split(".")[-1]
assert (
validation_extension == train_extension
), "`validation_file` should have the same extension (csv or json) as `train_file`."
@dataclass
class ModelArguments:
"""
Arguments pertaining to which model/config/tokenizer we are going to fine-tune from.
"""
model_name_or_path: str = field(
metadata={"help": "Path to pretrained model or model identifier from huggingface.co/models"}
)
config_name: Optional[str] = field(
default=None, metadata={"help": "Pretrained config name or path if not the same as model_name"}
)
tokenizer_name: Optional[str] = field(
default=None, metadata={"help": "Pretrained tokenizer name or path if not the same as model_name"}
)
cache_dir: Optional[str] = field(
default=None,
metadata={"help": "Where do you want to store the pretrained models downloaded from huggingface.co"},
)
use_fast_tokenizer: bool = field(
default=True,
metadata={"help": "Whether to use one of the fast tokenizer (backed by the tokenizers library) or not."},
)
model_revision: str = field(
default="main",
metadata={"help": "The specific model version to use (can be a branch name, tag name or commit id)."},
)
use_auth_token: bool = field(
default=False,
metadata={
"help": "Will use the token generated when running `transformers-cli login` (necessary to use this script "
"with private models)."
},
)
def main():
# See all possible arguments in src/transformers/training_args.py
# or by passing the --help flag to this script.
# We now keep distinct sets of args, for a cleaner separation of concerns.
parser = HfArgumentParser((ModelArguments, DataTrainingArguments, TrainingArguments))
if len(sys.argv) == 2 and sys.argv[1].endswith(".json"):
# If we pass only one argument to the script and it's the path to a json file,
# let's parse it to get our arguments.
model_args, data_args, training_args = parser.parse_json_file(json_file=os.path.abspath(sys.argv[1]))
else:
model_args, data_args, training_args = parser.parse_args_into_dataclasses()
# Setup logging
logging.basicConfig(
format="%(asctime)s - %(levelname)s - %(name)s - %(message)s",
datefmt="%m/%d/%Y %H:%M:%S",
handlers=[logging.StreamHandler(sys.stdout)],
)
log_level = training_args.get_process_log_level()
logger.setLevel(log_level)
datasets.utils.logging.set_verbosity(log_level)
transformers.utils.logging.set_verbosity(log_level)
transformers.utils.logging.enable_default_handler()
transformers.utils.logging.enable_explicit_format()
# Log on each process the small summary:
logger.warning(
f"Process rank: {training_args.local_rank}, device: {training_args.device}, n_gpu: {training_args.n_gpu}"
+ f"distributed training: {bool(training_args.local_rank != -1)}, 16-bits training: {training_args.fp16}"
)
logger.info(f"Training/evaluation parameters {training_args}")
# Detecting last checkpoint.
last_checkpoint = None
if os.path.isdir(training_args.output_dir) and training_args.do_train and not training_args.overwrite_output_dir:
last_checkpoint = get_last_checkpoint(training_args.output_dir)
if last_checkpoint is None and len(os.listdir(training_args.output_dir)) > 0:
raise ValueError(
f"Output directory ({training_args.output_dir}) already exists and is not empty. "
"Use --overwrite_output_dir to overcome."
)
elif last_checkpoint is not None and training_args.resume_from_checkpoint is None:
logger.info(
f"Checkpoint detected, resuming training at {last_checkpoint}. To avoid this behavior, change "
"the `--output_dir` or add `--overwrite_output_dir` to train from scratch."
)
# Set seed before initializing model.
set_seed(training_args.seed)
# Get the datasets: you can either provide your own CSV/JSON training and evaluation files (see below)
# or specify a GLUE benchmark task (the dataset will be downloaded automatically from the datasets Hub).
#
# For CSV/JSON files, this script will use as labels the column called 'label' and as pair of sentences the
# sentences in columns called 'sentence1' and 'sentence2' if such column exists or the first two columns not named
# label if at least two columns are provided.
#
# If the CSVs/JSONs contain only one non-label column, the script does single sentence classification on this
# single column. You can easily tweak this behavior (see below)
#
# In distributed training, the load_dataset function guarantee that only one local process can concurrently
# download the dataset.
if data_args.task_name is not None:
# Downloading and loading a dataset from the hub.
raw_datasets = load_dataset("glue", data_args.task_name, cache_dir=model_args.cache_dir)
elif data_args.dataset_name is not None:
# Downloading and loading a dataset from the hub.
raw_datasets = load_dataset(
data_args.dataset_name, data_args.dataset_config_name, cache_dir=model_args.cache_dir
)
else:
# Loading a dataset from your local files.
# CSV/JSON training and evaluation files are needed.
data_files = {"train": data_args.train_file, "validation": data_args.validation_file}
# Get the test dataset: you can provide your own CSV/JSON test file (see below)
# when you use `do_predict` without specifying a GLUE benchmark task.
if training_args.do_predict:
if data_args.test_file is not None:
train_extension = data_args.train_file.split(".")[-1]
test_extension = data_args.test_file.split(".")[-1]
assert (
test_extension == train_extension
), "`test_file` should have the same extension (csv or json) as `train_file`."
data_files["test"] = data_args.test_file
else:
raise ValueError("Need either a GLUE task or a test file for `do_predict`.")
for key in data_files.keys():
logger.info(f"load a local file for {key}: {data_files[key]}")
if data_args.train_file.endswith(".csv"):
# Loading a dataset from local csv files
raw_datasets = load_dataset("csv", data_files=data_files, cache_dir=model_args.cache_dir)
else:
# Loading a dataset from local json files
raw_datasets = load_dataset("json", data_files=data_files, cache_dir=model_args.cache_dir)
# See more about loading any type of standard or custom dataset at
# https://huggingface.co/docs/datasets/loading_datasets.html.
# Labels
if data_args.task_name is not None:
is_regression = data_args.task_name == "stsb"
if not is_regression:
label_list = raw_datasets["train"].features["label"].names
num_labels = len(label_list)
else:
num_labels = 1
else:
# Trying to have good defaults here, don't hesitate to tweak to your needs.
is_regression = raw_datasets["train"].features["label"].dtype in ["float32", "float64"]
if is_regression:
num_labels = 1
else:
# A useful fast method:
# https://huggingface.co/docs/datasets/package_reference/main_classes.html#datasets.Dataset.unique
label_list = raw_datasets["train"].unique("label")
label_list.sort() # Let's sort it for determinism
num_labels = len(label_list)
# Load pretrained model and tokenizer
#
# In distributed training, the .from_pretrained methods guarantee that only one local process can concurrently
# download model & vocab.
config = AutoConfig.from_pretrained(
model_args.config_name if model_args.config_name else model_args.model_name_or_path,
num_labels=num_labels,
finetuning_task=data_args.task_name,
cache_dir=model_args.cache_dir,
revision=model_args.model_revision,
use_auth_token=True if model_args.use_auth_token else None,
)
tokenizer = AutoTokenizer.from_pretrained(
model_args.tokenizer_name if model_args.tokenizer_name else model_args.model_name_or_path,
cache_dir=model_args.cache_dir,
use_fast=model_args.use_fast_tokenizer,
revision=model_args.model_revision,
use_auth_token=True if model_args.use_auth_token else None,
)
model = AutoModelForSequenceClassification.from_pretrained(
model_args.model_name_or_path,
from_tf=bool(".ckpt" in model_args.model_name_or_path),
config=config,
cache_dir=model_args.cache_dir,
revision=model_args.model_revision,
use_auth_token=True if model_args.use_auth_token else None,
)
# Preprocessing the raw_datasets
if data_args.task_name is not None:
sentence1_key, sentence2_key = task_to_keys[data_args.task_name]
else:
# Again, we try to have some nice defaults but don't hesitate to tweak to your use case.
non_label_column_names = [name for name in raw_datasets["train"].column_names if name != "label"]
if "sentence1" in non_label_column_names and "sentence2" in non_label_column_names:
sentence1_key, sentence2_key = "sentence1", "sentence2"
else:
if len(non_label_column_names) >= 2:
sentence1_key, sentence2_key = non_label_column_names[:2]
else:
sentence1_key, sentence2_key = non_label_column_names[0], None
sentence1_key, sentence2_key = "text", None
# Padding strategy
if data_args.pad_to_max_length:
padding = "max_length"
else:
# We will pad later, dynamically at batch creation, to the max sequence length in each batch
padding = False
# Some models have set the order of the labels to use, so let's make sure we do use it.
label_to_id = None
if (
model.config.label2id != PretrainedConfig(num_labels=num_labels).label2id
and data_args.task_name is not None
and not is_regression
):
# Some have all caps in their config, some don't.
label_name_to_id = {k.lower(): v for k, v in model.config.label2id.items()}
if list(sorted(label_name_to_id.keys())) == list(sorted(label_list)):
label_to_id = {i: int(label_name_to_id[label_list[i]]) for i in range(num_labels)}
else:
logger.warning(
"Your model seems to have been trained with labels, but they don't match the dataset: ",
f"model labels: {list(sorted(label_name_to_id.keys()))}, dataset labels: {list(sorted(label_list))}."
"\nIgnoring the model labels as a result.",
)
elif data_args.task_name is None and not is_regression:
label_to_id = {v: i for i, v in enumerate(label_list)}
if label_to_id is not None:
model.config.label2id = label_to_id
model.config.id2label = {id: label for label, id in config.label2id.items()}
elif data_args.task_name is not None and not is_regression:
model.config.label2id = {l: i for i, l in enumerate(label_list)}
model.config.id2label = {id: label for label, id in config.label2id.items()}
if data_args.max_seq_length > tokenizer.model_max_length:
logger.warning(
f"The max_seq_length passed ({data_args.max_seq_length}) is larger than the maximum length for the"
f"model ({tokenizer.model_max_length}). Using max_seq_length={tokenizer.model_max_length}."
)
max_seq_length = min(data_args.max_seq_length, tokenizer.model_max_length)
def preprocess_function(examples):
# Tokenize the texts
args = (
(examples[sentence1_key],) if sentence2_key is None else (examples[sentence1_key], examples[sentence2_key])
)
result = tokenizer(*args, padding=padding, max_length=max_seq_length, truncation=True)
# Map labels to IDs (not necessary for GLUE tasks)
if label_to_id is not None and "label" in examples:
result["label"] = [(label_to_id[l] if l != -1 else -1) for l in examples["label"]]
return result
with training_args.main_process_first(desc="dataset map pre-processing"):
raw_datasets = raw_datasets.map(
preprocess_function,
batched=True,
load_from_cache_file=not data_args.overwrite_cache,
desc="Running tokenizer on dataset",
)
if training_args.do_train:
if "train" not in raw_datasets:
raise ValueError("--do_train requires a train dataset")
train_dataset = raw_datasets["train"]
if data_args.max_train_samples is not None:
train_dataset = train_dataset.select(range(data_args.max_train_samples))
if training_args.do_eval:
if "validation" not in raw_datasets and "validation_matched" not in raw_datasets:
raise ValueError("--do_eval requires a validation dataset")
eval_dataset = raw_datasets["validation_matched" if data_args.task_name == "mnli" else "validation"]
if data_args.max_eval_samples is not None:
eval_dataset = eval_dataset.select(range(data_args.max_eval_samples))
if training_args.do_predict or data_args.task_name is not None or data_args.test_file is not None:
if "test" not in raw_datasets and "test_matched" not in raw_datasets:
raise ValueError("--do_predict requires a test dataset")
predict_dataset = raw_datasets["test_matched" if data_args.task_name == "mnli" else "test"]
if data_args.max_predict_samples is not None:
predict_dataset = predict_dataset.select(range(data_args.max_predict_samples))
# Log a few random samples from the training set:
if training_args.do_train:
for index in random.sample(range(len(train_dataset)), 3):
logger.info(f"Sample {index} of the training set: {train_dataset[index]}.")
# Get the metric function
if data_args.task_name is not None:
metric = load_metric("glue", data_args.task_name)
else:
metric = load_metric("accuracy")
# You can define your custom compute_metrics function. It takes an `EvalPrediction` object (a namedtuple with a
# predictions and label_ids field) and has to return a dictionary string to float.
def compute_metrics(p: EvalPrediction):
preds = p.predictions[0] if isinstance(p.predictions, tuple) else p.predictions
preds = np.squeeze(preds) if is_regression else np.argmax(preds, axis=1)
if data_args.task_name is not None:
result = metric.compute(predictions=preds, references=p.label_ids)
if len(result) > 1:
result["combined_score"] = np.mean(list(result.values())).item()
return result
elif is_regression:
return {"mse": ((preds - p.label_ids) ** 2).mean().item()}
else:
return {"accuracy": (preds == p.label_ids).astype(np.float32).mean().item()}
# Data collator will default to DataCollatorWithPadding when the tokenizer is passed to Trainer, so we change it if
# we already did the padding.
if data_args.pad_to_max_length:
data_collator = default_data_collator
elif training_args.fp16:
data_collator = DataCollatorWithPadding(tokenizer, pad_to_multiple_of=8)
else:
data_collator = None
# Initialize our Trainer
trainer = Trainer(
model=model,
args=training_args,
train_dataset=train_dataset if training_args.do_train else None,
eval_dataset=eval_dataset if training_args.do_eval else None,
compute_metrics=compute_metrics,
tokenizer=tokenizer,
data_collator=data_collator,
)
# Training
if training_args.do_train:
checkpoint = None
if training_args.resume_from_checkpoint is not None:
checkpoint = training_args.resume_from_checkpoint
elif last_checkpoint is not None:
checkpoint = last_checkpoint
train_result = trainer.train(resume_from_checkpoint=checkpoint)
metrics = train_result.metrics
max_train_samples = (
data_args.max_train_samples if data_args.max_train_samples is not None else len(train_dataset)
)
metrics["train_samples"] = min(max_train_samples, len(train_dataset))
trainer.save_model() # Saves the tokenizer too for easy upload
trainer.log_metrics("train", metrics)
trainer.save_metrics("train", metrics)
trainer.save_state()
# Evaluation
if training_args.do_eval:
logger.info("*** Evaluate ***")
# Loop to handle MNLI double evaluation (matched, mis-matched)
tasks = [data_args.task_name]
eval_datasets = [eval_dataset]
if data_args.task_name == "mnli":
tasks.append("mnli-mm")
eval_datasets.append(raw_datasets["validation_mismatched"])
for eval_dataset, task in zip(eval_datasets, tasks):
metrics = trainer.evaluate(eval_dataset=eval_dataset)
max_eval_samples = (
data_args.max_eval_samples if data_args.max_eval_samples is not None else len(eval_dataset)
)
metrics["eval_samples"] = min(max_eval_samples, len(eval_dataset))
trainer.log_metrics("eval", metrics)
trainer.save_metrics("eval", metrics)
if training_args.do_predict:
logger.info("*** Predict ***")
# Loop to handle MNLI double evaluation (matched, mis-matched)
tasks = [data_args.task_name]
predict_datasets = [predict_dataset]
if data_args.task_name == "mnli":
tasks.append("mnli-mm")
predict_datasets.append(raw_datasets["test_mismatched"])
for predict_dataset, task in zip(predict_datasets, tasks):
# Removing the `label` columns because it contains -1 and Trainer won't like that.
predict_dataset = predict_dataset.remove_columns("label")
predictions = trainer.predict(predict_dataset, metric_key_prefix="predict").predictions
predictions = np.squeeze(predictions) if is_regression else np.argmax(predictions, axis=1)
output_predict_file = os.path.join(training_args.output_dir, f"predict_results_{task}.txt")
if trainer.is_world_process_zero():
with open(output_predict_file, "w") as writer:
logger.info(f"***** Predict results {task} *****")
writer.write("index\tprediction\n")
for index, item in enumerate(predictions):
if is_regression:
writer.write(f"{index}\t{item:3.3f}\n")
else:
item = label_list[item]
writer.write(f"{index}\t{item}\n")
kwargs = {"finetuned_from": model_args.model_name_or_path, "tasks": "text-classification"}
if data_args.task_name is not None:
kwargs["language"] = "en"
kwargs["dataset_tags"] = "glue"
kwargs["dataset_args"] = data_args.task_name
kwargs["dataset"] = f"GLUE {data_args.task_name.upper()}"
if training_args.push_to_hub:
trainer.push_to_hub(**kwargs)
else:
trainer.create_model_card(**kwargs)
def _mp_fn(index):
# For xla_spawn (TPUs)
main()
if __name__ == "__main__":
main()
| 25,282 | 43.278459 | 119 | py |
robust-transformers | robust-transformers-main/examples/pytorch/text-classification/run_glue_cartography.py | #!/usr/bin/env python
# coding=utf-8
# Copyright 2020 The HuggingFace Inc. team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
""" Finetuning the library models for sequence classification on GLUE."""
# You can also adapt this script on your own text classification task. Pointers for this are left as comments.
import logging
import os
import random
import sys
from dataclasses import dataclass, field
from typing import Optional
import datasets
import numpy as np
from datasets import load_dataset, load_metric
import torch
import transformers
from transformers import (
AutoConfig,
AutoModelForSequenceClassification,
AutoTokenizer,
CartographyDataCollatorWithPadding,
EvalPrediction,
HfArgumentParser,
PretrainedConfig,
TrainerDro,
TrainerDroGA,
TrainingArguments,
DominoTrainingArguments,
DroArguments,
cartography_data_collator,
set_seed,
)
from transformers.file_utils import WEIGHTS_NAME
from transformers.trainer_utils import get_last_checkpoint
from transformers.utils import check_min_version
from transformers.utils.versions import require_version
# Will error if the minimal version of Transformers is not installed. Remove at your own risks.
check_min_version("4.18.0.dev0")
require_version("datasets>=1.8.0", "To fix: pip install -r examples/pytorch/text-classification/requirements.txt")
task_to_keys = {
"cola": ("sentence", None),
"mnli": ("premise", "hypothesis"),
"mrpc": ("sentence1", "sentence2"),
"qnli": ("question", "sentence"),
"qqp": ("question1", "question2"),
"rte": ("sentence1", "sentence2"),
"sst2": ("sentence", None),
"stsb": ("sentence1", "sentence2"),
"wnli": ("sentence1", "sentence2"),
}
custom_task_to_keys = {
"mnli_resplit": ("sentence1", "sentence2"),
"wilds_civil_comments": ("sentence1", None),
"winogrande": ("sentence1", "sentence2"),
"commonsenseqa": ("sentence1", "sentence2"),
"wanli": ("premise", "hypothesis"),
"qqp": ("sentence1", "sentence2"),
"sst2": ("sentence", None),
"fever": ("sentence1", "sentence2"),
}
logger = logging.getLogger(__name__)
transformers.logging.set_verbosity_error()
@dataclass
class DataTrainingArguments:
"""
Arguments pertaining to what data we are going to input our model for training and eval.
Using `HfArgumentParser` we can turn this class
into argparse arguments to be able to specify them on
the command line.
"""
task_name: Optional[str] = field(
default=None,
metadata={"help": "The name of the task to train on: " + ", ".join(task_to_keys.keys())},
)
custom_task_name: Optional[str] = field(
default="mnli_resplit",
metadata={"help": "The name of the task to train on: " + ", ".join(task_to_keys.keys())},
)
transform_labels: bool = field(
default=False,
metadata={"help": "Whether to transform class labels for a task to fit OOD datasets."},
)
dataset_name: Optional[str] = field(
default=None, metadata={"help": "The name of the dataset to use (via the datasets library)."}
)
dataset_config_name: Optional[str] = field(
default=None, metadata={"help": "The configuration name of the dataset to use (via the datasets library)."}
)
max_seq_length: int = field(
default=128,
metadata={
"help": "The maximum total input sequence length after tokenization. Sequences longer "
"than this will be truncated, sequences shorter will be padded."
},
)
overwrite_cache: bool = field(
default=False, metadata={"help": "Overwrite the cached preprocessed datasets or not."}
)
pad_to_max_length: bool = field(
default=True,
metadata={
"help": "Whether to pad all samples to `max_seq_length`. "
"If False, will pad the samples dynamically when batching to the maximum length in the batch."
},
)
max_train_samples: Optional[int] = field(
default=None,
metadata={
"help": "For debugging purposes or quicker training, truncate the number of training examples to this "
"value if set."
},
)
max_eval_samples: Optional[int] = field(
default=None,
metadata={
"help": "For debugging purposes or quicker training, truncate the number of evaluation examples to this "
"value if set."
},
)
max_predict_samples: Optional[int] = field(
default=None,
metadata={
"help": "For debugging purposes or quicker training, truncate the number of prediction examples to this "
"value if set."
},
)
train_file: Optional[str] = field(
default=None, metadata={"help": "A csv or a json file containing the training data."}
)
validation_file: Optional[str] = field(
default=None, metadata={"help": "A csv or a json file containing the validation data."}
)
test_file: Optional[str] = field(default=None, metadata={"help": "A csv or a json file containing the test data."})
def __post_init__(self):
if self.task_name is not None:
self.task_name = self.task_name.lower()
if self.task_name not in task_to_keys.keys():
raise ValueError("Unknown task, you should pick one in " + ",".join(task_to_keys.keys()))
elif self.dataset_name is not None:
pass
elif self.train_file is None or self.validation_file is None:
raise ValueError("Need either a GLUE task, a training/validation file or a dataset name.")
else:
train_extension = self.train_file.split(".")[-1]
assert train_extension in ["tsv", "csv", "json"], "`train_file` should be a csv or a json file."
validation_extension = self.validation_file.split(".")[-1]
assert (
validation_extension == train_extension
), "`validation_file` should have the same extension (csv or json) as `train_file`."
@dataclass
class ModelArguments:
"""
Arguments pertaining to which model/config/tokenizer we are going to fine-tune from.
"""
model_name_or_path: str = field(
metadata={"help": "Path to pretrained model or model identifier from huggingface.co/models"}
)
config_name: Optional[str] = field(
default=None, metadata={"help": "Pretrained config name or path if not the same as model_name"}
)
tokenizer_name: Optional[str] = field(
default=None, metadata={"help": "Pretrained tokenizer name or path if not the same as model_name"}
)
cache_dir: Optional[str] = field(
default=None,
metadata={"help": "Where do you want to store the pretrained models downloaded from huggingface.co"},
)
use_fast_tokenizer: bool = field(
default=True,
metadata={"help": "Whether to use one of the fast tokenizer (backed by the tokenizers library) or not."},
)
model_revision: str = field(
default="main",
metadata={"help": "The specific model version to use (can be a branch name, tag name or commit id)."},
)
use_auth_token: bool = field(
default=False,
metadata={
"help": "Will use the token generated when running `transformers-cli login` (necessary to use this script "
"with private models)."
},
)
def main():
# See all possible arguments in src/transformers/training_args.py
# or by passing the --help flag to this script.
# We now keep distinct sets of args, for a cleaner separation of concerns.
parser = HfArgumentParser((ModelArguments, DataTrainingArguments, DominoTrainingArguments, DroArguments))
if len(sys.argv) == 2 and sys.argv[1].endswith(".json"):
# If we pass only one argument to the script and it's the path to a json file,
# let's parse it to get our arguments.
model_args, data_args, training_args, dro_args = parser.parse_json_file(json_file=os.path.abspath(sys.argv[1]))
else:
model_args, data_args, training_args, dro_args = parser.parse_args_into_dataclasses()
# Setup logging
logging.basicConfig(
format="%(asctime)s - %(levelname)s - %(name)s - %(message)s",
datefmt="%m/%d/%Y %H:%M:%S",
handlers=[logging.StreamHandler(sys.stdout)],
)
log_level = training_args.get_process_log_level()
logger.setLevel(log_level)
datasets.utils.logging.set_verbosity(log_level)
transformers.utils.logging.set_verbosity(log_level)
transformers.utils.logging.enable_default_handler()
transformers.utils.logging.enable_explicit_format()
# Log on each process the small summary:
logger.warning(
f"Process rank: {training_args.local_rank}, device: {training_args.device}, n_gpu: {training_args.n_gpu}"
+ f"distributed training: {bool(training_args.local_rank != -1)}, 16-bits training: {training_args.fp16}"
)
logger.info(f"Training/evaluation parameters {training_args}")
# Detecting last checkpoint.
last_checkpoint = None
if os.path.isdir(training_args.output_dir) and training_args.do_train and not training_args.overwrite_output_dir:
last_checkpoint = get_last_checkpoint(training_args.output_dir)
if last_checkpoint is None and len(os.listdir(training_args.output_dir)) > 0:
raise ValueError(
f"Output directory ({training_args.output_dir}) already exists and is not empty. "
"Use --overwrite_output_dir to overcome."
)
elif last_checkpoint is not None and training_args.resume_from_checkpoint is None:
logger.info(
f"Checkpoint detected, resuming training at {last_checkpoint}. To avoid this behavior, change "
"the `--output_dir` or add `--overwrite_output_dir` to train from scratch."
)
# Set seed before initializing model.
set_seed(training_args.seed)
# Get the datasets: you can either provide your own CSV/JSON training and evaluation files (see below)
# or specify a GLUE benchmark task (the dataset will be downloaded automatically from the datasets Hub).
#
# For CSV/JSON files, this script will use as labels the column called 'label' and as pair of sentences the
# sentences in columns called 'sentence1' and 'sentence2' if such column exists or the first two columns not named
# label if at least two columns are provided.
#
# If the CSVs/JSONs contain only one non-label column, the script does single sentence classification on this
# single column. You can easily tweak this behavior (see below)
#
# In distributed training, the load_dataset function guarantee that only one local process can concurrently
# download the dataset.
if data_args.task_name is not None:
# Downloading and loading a dataset from the hub.
raw_datasets = load_dataset("glue", data_args.task_name, cache_dir=model_args.cache_dir)
elif data_args.dataset_name is not None:
# Downloading and loading a dataset from the hub.
raw_datasets = load_dataset(
data_args.dataset_name, data_args.dataset_config_name, cache_dir=model_args.cache_dir
)
else:
# Loading a dataset from your local files.
# CSV/JSON training and evaluation files are needed.
data_files = {"train": data_args.train_file, "validation": data_args.validation_file}
# Get the test dataset: you can provide your own CSV/JSON test file (see below)
# when you use `do_predict` without specifying a GLUE benchmark task.
if training_args.do_predict:
if data_args.test_file is not None:
train_extension = data_args.train_file.split(".")[-1]
test_extension = data_args.test_file.split(".")[-1]
assert (
test_extension == train_extension
), "`test_file` should have the same extension (csv or json) as `train_file`."
data_files["test"] = data_args.test_file
else:
raise ValueError("Need either a GLUE task or a test file for `do_predict`.")
for key in data_files.keys():
logger.info(f"load a local file for {key}: {data_files[key]}")
if data_args.train_file.endswith(".csv"):
# Loading a dataset from local csv files
raw_datasets = load_dataset("csv", data_files=data_files, cache_dir=model_args.cache_dir)
else:
# Loading a dataset from local json files
raw_datasets = load_dataset("json", data_files=data_files, cache_dir=model_args.cache_dir)
# See more about loading any type of standard or custom dataset at
# https://huggingface.co/docs/datasets/loading_datasets.html.
# Labels
if data_args.task_name is not None:
is_regression = data_args.task_name == "stsb"
if not is_regression:
label_list = raw_datasets["train"].features["label"].names
num_labels = len(label_list)
else:
num_labels = 1
else:
# Trying to have good defaults here, don't hesitate to tweak to your needs.
is_regression = raw_datasets["train"].features["label"].dtype in ["float32", "float64"]
if is_regression:
num_labels = 1
else:
# A useful fast method:
# https://huggingface.co/docs/datasets/package_reference/main_classes.html#datasets.Dataset.unique
label_list = raw_datasets["train"].unique("label")
label_list.sort() # Let's sort it for determinism
num_labels = len(label_list)
# Load pretrained model and tokenizer
#
# In distributed training, the .from_pretrained methods guarantee that only one local process can concurrently
# download model & vocab.
config = AutoConfig.from_pretrained(
model_args.config_name if model_args.config_name else model_args.model_name_or_path,
num_labels=num_labels,
finetuning_task=data_args.task_name,
cache_dir=model_args.cache_dir,
revision=model_args.model_revision,
use_auth_token=True if model_args.use_auth_token else None,
)
tokenizer = AutoTokenizer.from_pretrained(
model_args.tokenizer_name if model_args.tokenizer_name else model_args.model_name_or_path,
cache_dir=model_args.cache_dir,
use_fast=model_args.use_fast_tokenizer,
revision=model_args.model_revision,
use_auth_token=True if model_args.use_auth_token else None,
)
model = AutoModelForSequenceClassification.from_pretrained(
model_args.model_name_or_path,
from_tf=bool(".ckpt" in model_args.model_name_or_path),
config=config,
cache_dir=model_args.cache_dir,
revision=model_args.model_revision,
use_auth_token=True if model_args.use_auth_token else None,
)
# Preprocessing the raw_datasets
if data_args.task_name is not None:
sentence1_key, sentence2_key = task_to_keys[data_args.task_name]
else:
# Again, we try to have some nice defaults but don't hesitate to tweak to your use case.
non_label_column_names = [name for name in raw_datasets["train"].column_names if name != "label"]
if "sentence1" in non_label_column_names and "sentence2" in non_label_column_names:
sentence1_key, sentence2_key = "sentence1", "sentence2"
else:
if len(non_label_column_names) >= 2:
sentence1_key, sentence2_key = non_label_column_names[:2]
else:
sentence1_key, sentence2_key = non_label_column_names[0], None
# TODO:For amazon, sentence1_key is fixed as "text"
# sentence1_key, sentence2_key = "text", None
# Custom MNLI with group info
sentence1_key, sentence2_key = custom_task_to_keys[data_args.custom_task_name]
# Padding strategy
if data_args.pad_to_max_length:
padding = "max_length"
else:
# We will pad later, dynamically at batch creation, to the max sequence length in each batch
padding = False
# Some models have set the order of the labels to use, so let's make sure we do use it.
label_to_id = None
if (
model.config.label2id != PretrainedConfig(num_labels=num_labels).label2id
and data_args.task_name is not None
and not is_regression
):
# Some have all caps in their config, some don't.
label_name_to_id = {k.lower(): v for k, v in model.config.label2id.items()}
if list(sorted(label_name_to_id.keys())) == list(sorted(label_list)):
label_to_id = {i: int(label_name_to_id[label_list[i]]) for i in range(num_labels)}
else:
logger.warning(
"Your model seems to have been trained with labels, but they don't match the dataset: ",
f"model labels: {list(sorted(label_name_to_id.keys()))}, dataset labels: {list(sorted(label_list))}."
"\nIgnoring the model labels as a result.",
)
elif data_args.task_name is None and not is_regression:
label_to_id = {v: i for i, v in enumerate(label_list)}
if label_to_id is not None:
model.config.label2id = label_to_id
model.config.id2label = {id: label for label, id in config.label2id.items()}
elif data_args.task_name is not None and not is_regression:
model.config.label2id = {l: i for i, l in enumerate(label_list)}
model.config.id2label = {id: label for label, id in config.label2id.items()}
if data_args.max_seq_length > tokenizer.model_max_length:
logger.warning(
f"The max_seq_length passed ({data_args.max_seq_length}) is larger than the maximum length for the"
f"model ({tokenizer.model_max_length}). Using max_seq_length={tokenizer.model_max_length}."
)
max_seq_length = min(data_args.max_seq_length, tokenizer.model_max_length)
def preprocess_function(examples):
# Tokenize the texts
args = (
(examples[sentence1_key],) if sentence2_key is None else (examples[sentence1_key], examples[sentence2_key])
)
result = tokenizer(*args, padding=padding, max_length=max_seq_length, truncation=True)
# Map labels to IDs (not necessary for GLUE tasks)
if label_to_id is not None and "label" in examples:
result["label"] = [(label_to_id[l] if l != -1 else -1) for l in examples["label"]]
result["guid"] = examples["guid"]
result["group"] = examples["group"]
return result
with training_args.main_process_first(desc="dataset map pre-processing"):
raw_datasets = raw_datasets.map(
preprocess_function,
batched=True,
load_from_cache_file=not data_args.overwrite_cache,
desc="Running tokenizer on dataset",
)
if training_args.do_train:
if "train" not in raw_datasets:
raise ValueError("--do_train requires a train dataset")
train_dataset = raw_datasets["train"]
if data_args.max_train_samples is not None:
train_dataset = train_dataset.select(range(data_args.max_train_samples))
if training_args.do_eval:
if "validation" not in raw_datasets and "validation_matched" not in raw_datasets:
raise ValueError("--do_eval requires a validation dataset")
eval_dataset = raw_datasets["validation_matched" if data_args.task_name == "mnli" else "validation"]
if data_args.max_eval_samples is not None:
eval_dataset = eval_dataset.select(range(data_args.max_eval_samples))
if training_args.do_predict or data_args.task_name is not None or data_args.test_file is not None:
if "test" not in raw_datasets and "test_matched" not in raw_datasets:
raise ValueError("--do_predict requires a test dataset")
predict_dataset = raw_datasets["test_matched" if data_args.task_name == "mnli" else "test"]
if data_args.max_predict_samples is not None:
predict_dataset = predict_dataset.select(range(data_args.max_predict_samples))
# Log a few random samples from the training set:
if training_args.do_train:
for index in random.sample(range(len(train_dataset)), 3):
logger.info(f"Sample {index} of the training set: {train_dataset[index]}.")
# Get the metric function
if data_args.task_name is not None:
metric = load_metric("glue", data_args.task_name)
else:
metric = load_metric("accuracy")
# You can define your custom compute_metrics function. It takes an `EvalPrediction` object (a namedtuple with a
# predictions and label_ids field) and has to return a dictionary string to float.
def compute_metrics(p: EvalPrediction):
preds = p.predictions[0] if isinstance(p.predictions, tuple) else p.predictions
preds = np.squeeze(preds) if is_regression else np.argmax(preds, axis=1)
if data_args.transform_labels and data_args.custom_task_name == "mnli_resplit":
keep = [label_to_id["entailment"], label_to_id["neutral"]]
neutral_class = label_to_id["neutral"]
new_preds = []
for pred in preds:
if pred in keep:
new_preds.append(pred)
else:
new_preds.append(neutral_class)
preds = np.array(new_preds, dtype=np.int32)
# preds = np.asarray([p for p in preds if p in keep else neutral_class])
if data_args.task_name is not None:
result = metric.compute(predictions=preds, references=p.label_ids)
if len(result) > 1:
result["combined_score"] = np.mean(list(result.values())).item()
return result
elif is_regression:
return {"mse": ((preds - p.label_ids) ** 2).mean().item()}
else:
return {"accuracy": (preds == p.label_ids).astype(np.float32).mean().item()}
# Data collator will default to DataCollatorWithPadding when the tokenizer is passed to Trainer, so we change it if
# we already did the padding.
if data_args.pad_to_max_length:
data_collator = cartography_data_collator
elif training_args.fp16:
data_collator = CartographyDataCollatorWithPadding(tokenizer, pad_to_multiple_of=8)
else:
data_collator = None
# Group DRO: Update trainin args with group counts, num_groups and group_str.
#TODO: change datasets.arrow_dataset.
if dro_args.is_robust and training_args.do_train:
group_list = [ex["group"] for ex in train_dataset]
unique_groups, group_counts = np.unique(group_list, return_counts=True)
dro_args.n_groups = len(unique_groups)
dro_args.group_counts = torch.LongTensor(group_counts)
#dro_args.group_str =
if dro_args.is_robust and dro_args.use_group_weights:
group_distributions = np.asarray([ex["group_distribution"] for ex in train_dataset])
group_list = np.argmax(group_distributions, axis=1)
unique_groups, group_counts = np.unique(group_list, return_counts=True)
dro_args.n_groups = len(unique_groups)
dro_args.group_counts = torch.LongTensor(group_counts)
if dro_args.reweight_groups and training_args.do_train:
# For ERM models, you need group_counts for weighted sampling.
group_list = [ex["group"] for ex in train_dataset]
unique_groups, group_counts = np.unique(group_list, return_counts=True)
dro_args.n_groups = len(unique_groups)
dro_args.group_counts = torch.LongTensor(group_counts)
# Initialize our Trainer
if training_args.gradient_accumulation_steps > 1:
trainer = TrainerDroGA(
model=model,
args=training_args,
dro_args=dro_args,
train_dataset=train_dataset if training_args.do_train else None,
eval_dataset=eval_dataset if training_args.do_eval else None,
compute_metrics=compute_metrics,
tokenizer=tokenizer,
data_collator=data_collator,
)
else:
trainer = TrainerDro(
model=model,
args=training_args,
dro_args=dro_args,
train_dataset=train_dataset if training_args.do_train else None,
eval_dataset=eval_dataset if training_args.do_eval else None,
compute_metrics=compute_metrics,
tokenizer=tokenizer,
data_collator=data_collator,
)
# Training
if training_args.do_train:
checkpoint = None
if training_args.resume_from_checkpoint is not None:
checkpoint = training_args.resume_from_checkpoint
elif last_checkpoint is not None:
checkpoint = last_checkpoint
train_result = trainer.train(resume_from_checkpoint=checkpoint)
metrics = train_result.metrics
max_train_samples = (
data_args.max_train_samples if data_args.max_train_samples is not None else len(train_dataset)
)
metrics["train_samples"] = min(max_train_samples, len(train_dataset))
trainer.save_model() # Saves the tokenizer too for easy upload
trainer.log_metrics("train", metrics)
trainer.save_metrics("train", metrics)
trainer.save_state()
# Evaluation
if training_args.do_eval:
logger.info("*** Evaluate ***")
# At the end of training, the best model is loaded for evaluation. In case of evaluation called without training, this needs to be done explicitly.
if trainer.state.best_model_checkpoint is not None:
# Wait for everyone to get here so we are sur the model has been saved by process 0.
# if is_torch_tpu_available():
# xm.rendezvous("load_best_model_at_end")
# elif args.local_rank != -1:
# dist.barrier()
logger.info(
f"Loading best model from {trainer.state.best_model_checkpoint} (score: {trainer.state.best_metric})."
)
best_model_path = os.path.join(trainer.state.best_model_checkpoint, WEIGHTS_NAME)
if os.path.exists(best_model_path):
# We load the model state dict on the CPU to avoid an OOM error.
state_dict = torch.load(best_model_path, map_location="cpu")
# If the model is on the GPU, it still works!
trainer._load_state_dict_in_model(state_dict)
else:
logger.warning(
f"Could not locate the best model at {best_model_path}, if you are running a distributed training "
"on multiple nodes, you should activate `--save_on_each_node`."
)
# Loop to handle MNLI double evaluation (matched, mis-matched)
tasks = [data_args.task_name]
eval_datasets = [eval_dataset]
if data_args.task_name == "mnli":
tasks.append("mnli-mm")
eval_datasets.append(raw_datasets["validation_mismatched"])
for eval_dataset, task in zip(eval_datasets, tasks):
metrics = trainer.evaluate(eval_dataset=eval_dataset)
max_eval_samples = (
data_args.max_eval_samples if data_args.max_eval_samples is not None else len(eval_dataset)
)
metrics["eval_samples"] = min(max_eval_samples, len(eval_dataset))
trainer.log_metrics("eval", metrics)
trainer.save_metrics("eval", metrics)
if training_args.do_predict:
logger.info("*** Predict ***")
if trainer.state.best_model_checkpoint is not None:
# Wait for everyone to get here so we are sur the model has been saved by process 0.
# if is_torch_tpu_available():
# xm.rendezvous("load_best_model_at_end")
# elif args.local_rank != -1:
# dist.barrier()
logger.info(
f"Loading best model from {trainer.state.best_model_checkpoint} (score: {trainer.state.best_metric})."
)
best_model_path = os.path.join(trainer.state.best_model_checkpoint, WEIGHTS_NAME)
if os.path.exists(best_model_path):
# We load the model state dict on the CPU to avoid an OOM error.
state_dict = torch.load(best_model_path, map_location="cpu")
# If the model is on the GPU, it still works!
trainer._load_state_dict_in_model(state_dict)
else:
logger.warning(
f"Could not locate the best model at {best_model_path}, if you are running a distributed training "
"on multiple nodes, you should activate `--save_on_each_node`."
)
# Loop to handle MNLI double evaluation (matched, mis-matched)
tasks = [data_args.task_name]
predict_datasets = [predict_dataset]
if data_args.task_name == "mnli":
tasks.append("mnli-mm")
predict_datasets.append(raw_datasets["test_mismatched"])
for predict_dataset, task in zip(predict_datasets, tasks):
# Removing the `label` columns because it contains -1 and Trainer won't like that.
predict_dataset = predict_dataset.remove_columns("label")
predictions = trainer.predict(predict_dataset, metric_key_prefix="predict").predictions
predictions = np.squeeze(predictions) if is_regression else np.argmax(predictions, axis=1)
output_predict_file = os.path.join(training_args.output_dir, f"predict_results_{task}.txt")
if trainer.is_world_process_zero():
with open(output_predict_file, "w") as writer:
logger.info(f"***** Predict results {task} *****")
writer.write("index\tprediction\n")
for index, item in enumerate(predictions):
if is_regression:
writer.write(f"{index}\t{item:3.3f}\n")
else:
item = label_list[item]
writer.write(f"{index}\t{item}\n")
kwargs = {"finetuned_from": model_args.model_name_or_path, "tasks": "text-classification"}
if data_args.task_name is not None:
kwargs["language"] = "en"
kwargs["dataset_tags"] = "glue"
kwargs["dataset_args"] = data_args.task_name
kwargs["dataset"] = f"GLUE {data_args.task_name.upper()}"
def _mp_fn(index):
# For xla_spawn (TPUs)
main()
if __name__ == "__main__":
main()
| 31,285 | 44.145743 | 155 | py |
robust-transformers | robust-transformers-main/examples/pytorch/text-classification/train_dy_filtering.py | """
Filtering and dataset mapping methods based on training dynamics.
By default, this module reads training dynamics from a given trained model and
computes the metrics---confidence, variability, correctness,
as well as baseline metrics of forgetfulness and threshold closeness
for each instance in the training data.
If specified, data maps can be plotted with respect to confidence and variability.
Moreover, datasets can be filtered with respect any of the other metrics.
"""
import argparse
import json
import logging
import matplotlib.pyplot as plt
import numpy as np
import os
import pandas as pd
import seaborn as sns
import torch
import tqdm
import csv
from data_utils import read_data
from collections import defaultdict
from typing import List
logging.basicConfig(
format="%(asctime)s - %(levelname)s - %(name)s - %(message)s", level=logging.INFO
)
logger = logging.getLogger(__name__)
def read_training_dynamics(model_dir: os.path,
strip_last: bool = False,
id_field: str = "guid",
burn_out: int = None):
"""
Given path to logged training dynamics, merge stats across epochs.
Returns:
- Dict between ID of a train instances and its gold label, and the list of logits across epochs.
"""
train_dynamics = {}
td_dir = os.path.join(model_dir, "training_dynamics")
num_epochs = len([f for f in os.listdir(td_dir) if os.path.isfile(os.path.join(td_dir, f))])
if burn_out:
num_epochs = burn_out
logger.info(f"Reading {num_epochs} files from {td_dir} ...")
for epoch_num in tqdm.tqdm(range(num_epochs)):
epoch_file = os.path.join(td_dir, f"dynamics_epoch_{epoch_num}.jsonl")
assert os.path.exists(epoch_file)
with open(epoch_file, "r") as infile:
for line in infile:
record = json.loads(line.strip())
guid = record[id_field] if not strip_last else record[id_field][:-1]
if guid not in train_dynamics:
assert epoch_num == 0
train_dynamics[guid] = {"gold": record["gold"], "logits": []}
train_dynamics[guid]["logits"].append(record[f"logits_epoch_{epoch_num}"])
logger.info(f"Read training dynamics for {len(train_dynamics)} train instances.")
return train_dynamics
def compute_forgetfulness(correctness_trend: List[float]) -> int:
"""
Given a epoch-wise trend of train predictions, compute frequency with which
an example is forgotten, i.e. predicted incorrectly _after_ being predicted correctly.
Based on: https://arxiv.org/abs/1812.05159
"""
if not any(correctness_trend): # Example is never predicted correctly, or learnt!
return 1000
learnt = False # Predicted correctly in the current epoch.
times_forgotten = 0
for is_correct in correctness_trend:
if (not learnt and not is_correct) or (learnt and is_correct):
# nothing changed.
continue
elif learnt and not is_correct:
# Forgot after learning at some point!
learnt = False
times_forgotten += 1
elif not learnt and is_correct:
# Learnt!
learnt = True
return times_forgotten
def compute_correctness(trend: List[float]) -> float:
"""
Aggregate #times an example is predicted correctly during all training epochs.
"""
return sum(trend)
def compute_train_dy_metrics(training_dynamics, args):
"""
Given the training dynamics (logits for each training instance across epochs), compute metrics
based on it, for data map coorodinates.
Computed metrics are: confidence, variability, correctness, forgetfulness, threshold_closeness---
the last two being baselines from prior work
(Example Forgetting: https://arxiv.org/abs/1812.05159 and
Active Bias: https://arxiv.org/abs/1704.07433 respectively).
Returns:
- DataFrame with these metrics.
- DataFrame with more typical training evaluation metrics, such as accuracy / loss.
"""
confidence_ = {}
variability_ = {}
threshold_closeness_ = {}
correctness_ = {}
forgetfulness_ = {}
# Functions to be applied to the data.
variability_func = lambda conf: np.std(conf)
if args.include_ci: # Based on prior work on active bias (https://arxiv.org/abs/1704.07433)
variability_func = lambda conf: np.sqrt(np.var(conf) + np.var(conf) * np.var(conf) / (len(conf)-1))
threshold_closeness_func = lambda conf: conf * (1 - conf)
loss = torch.nn.CrossEntropyLoss()
num_tot_epochs = len(list(training_dynamics.values())[0]["logits"])
if args.burn_out < num_tot_epochs:
logger.info(f"Computing training dynamics. Burning out at {args.burn_out} of {num_tot_epochs}. ")
else:
logger.info(f"Computing training dynamics across {num_tot_epochs} epochs")
logger.info("Metrics computed: confidence, variability, correctness, forgetfulness, threshold_closeness")
logits = {i: [] for i in range(num_tot_epochs)}
targets = {i: [] for i in range(num_tot_epochs)}
training_accuracy = defaultdict(float)
for guid in tqdm.tqdm(training_dynamics):
correctness_trend = []
true_probs_trend = []
record = training_dynamics[guid]
for i, epoch_logits in enumerate(record["logits"]):
probs = torch.nn.functional.softmax(torch.Tensor(epoch_logits), dim=-1)
true_class_prob = float(probs[record["gold"]])
true_probs_trend.append(true_class_prob)
prediction = np.argmax(epoch_logits)
is_correct = (prediction == record["gold"]).item()
correctness_trend.append(is_correct)
training_accuracy[i] += is_correct
logits[i].append(epoch_logits)
targets[i].append(record["gold"])
# For PVI
# Use logits to compute entropy on a null model and a model and compute difference to get PVI for a training examples
# For Influence:
# compute train by test example influence and average over testing data.
if args.burn_out < num_tot_epochs:
correctness_trend = correctness_trend[:args.burn_out]
true_probs_trend = true_probs_trend[:args.burn_out]
correctness_[guid] = compute_correctness(correctness_trend)
confidence_[guid] = np.mean(true_probs_trend)
variability_[guid] = variability_func(true_probs_trend)
forgetfulness_[guid] = compute_forgetfulness(correctness_trend)
threshold_closeness_[guid] = threshold_closeness_func(confidence_[guid])
# Should not affect ranking, so ignoring.
epsilon_var = np.mean(list(variability_.values()))
column_names = ['guid',
'index',
'threshold_closeness',
'confidence',
'variability',
'correctness',
'forgetfulness',]
df = pd.DataFrame([[guid,
i,
threshold_closeness_[guid],
confidence_[guid],
variability_[guid],
correctness_[guid],
forgetfulness_[guid],
] for i, guid in enumerate(correctness_)], columns=column_names)
df_train = pd.DataFrame([[i,
loss(torch.Tensor(logits[i]), torch.LongTensor(targets[i])).item() / len(training_dynamics),
training_accuracy[i] / len(training_dynamics)
] for i in range(num_tot_epochs)],
columns=['epoch', 'loss', 'train_acc'])
return df, df_train
def plot_data_map(args,
dataframe: pd.DataFrame,
plot_dir: os.path,
hue_metric: str = 'correct.',
title: str = '',
model: str = 'RoBERTa',
show_hist: bool = False,
max_instances_to_plot = 2000):
# Set style.
sns.set(style='whitegrid', font_scale=1.6, font='Georgia', context='paper')
logger.info(f"Plotting figure for {title} using the {model} model ...")
# Subsample data to plot, so the plot is not too busy.
dataframe = dataframe.sample(n=max_instances_to_plot if dataframe.shape[0] > max_instances_to_plot else len(dataframe))
# Normalize correctness to a value between 0 and 1.
dataframe = dataframe.assign(corr_frac = lambda d: d.correctness / d.correctness.max())
dataframe['correct.'] = [f"{x:.1f}" for x in dataframe['corr_frac']]
main_metric = 'variability'
other_metric = 'confidence'
if args.task_name == "MNLI_RESPLIT":
original_train_file = args.train_file
train_numeric = read_data(original_train_file, task_name=args.task_name, guid_as_int=False)
hue = hue_metric
# Check if hue metric is in dataframe, if not extract it from training dataset.
if hue in dataframe:
num_hues = len(dataframe[hue].unique().tolist())
style = hue_metric if num_hues < 8 else None
else:
hue_column = []
selection_iterator = tqdm.tqdm(range(len(dataframe)))
for idx in selection_iterator:
selected_id = dataframe.iloc[idx]["guid"]
hue_column.append(train_numeric[selected_id][hue])
dataframe[hue] = hue_column
num_hues = len(dataframe[hue].unique().tolist())
style = hue_metric if num_hues < 8 else None
if not show_hist:
fig, ax0 = plt.subplots(1, 1, figsize=(8, 6))
else:
fig = plt.figure(figsize=(14, 10), )
gs = fig.add_gridspec(3, 2, width_ratios=[5, 1])
ax0 = fig.add_subplot(gs[:, 0])
# Make the scatterplot.
# Choose a palette.
pal = sns.diverging_palette(260, 15, n=num_hues, sep=10, center="dark")
plot = sns.scatterplot(x=main_metric,
y=other_metric,
ax=ax0,
data=dataframe,
hue=hue,
palette=pal,
style=style,
s=30)
# Annotate Regions.
bb = lambda c: dict(boxstyle="round,pad=0.3", ec=c, lw=2, fc="white")
func_annotate = lambda text, xyc, bbc : ax0.annotate(text,
xy=xyc,
xycoords="axes fraction",
fontsize=15,
color='black',
va="center",
ha="center",
rotation=350,
bbox=bb(bbc))
an1 = func_annotate("ambiguous", xyc=(0.9, 0.5), bbc='black')
an2 = func_annotate("easy-to-learn", xyc=(0.27, 0.85), bbc='r')
an3 = func_annotate("hard-to-learn", xyc=(0.35, 0.25), bbc='b')
if not show_hist:
plot.legend(ncol=1, bbox_to_anchor=[0.175, 0.5], loc='right')
else:
plot.legend(fancybox=True, shadow=True, ncol=1)
plot.set_xlabel('variability')
plot.set_ylabel('confidence')
fig.tight_layout()
filename = f'{plot_dir}/{title}_{model}.pdf'
fig.savefig(filename, dpi=300)
logger.info(f"Plot saved to {filename}")
def tag_data(args, dataframe: pd.DataFrame,
tagging_output_dir: os.path,
model: str = 'RoBERTa-base'):
# Normalize correctness to a value between 0 and 1.
dataframe = dataframe.assign(corr_frac = lambda d: d.correctness / d.correctness.max())
dataframe['correct.'] = [f"{x:.1f}" for x in dataframe['corr_frac']]
# unique correctness values
correct_values = set(dataframe.loc[:, "correct."])
correct_groups = {v:i for i,v in enumerate(correct_values)}
if args.task_name == "MNLI_RESPLIT":
original_train_file = args.train_file
train_numeric = read_data(original_train_file, task_name=args.task_name, guid_as_int=False)
original_val_file = args.val_file
val_numeric = read_data(original_val_file, task_name=args.task_name, guid_as_int=False)
labels = ["entailment", "neutral", "contradiction"]
correct_label_groups = {}
group_no = 0
for label in labels:
for correct_group in correct_values:
correct_label_groups[(label, correct_group)] = group_no
group_no += 1
outdir = args.tagging_output_dir
if not os.path.exists(outdir):
os.makedirs(outdir)
selection_iterator = tqdm.tqdm(range(len(dataframe)))
with open(os.path.join(outdir, f"train_resplit_cartography.json"), "w") as outfile:
for idx in selection_iterator:
selected_id = dataframe.iloc[idx]["guid"]
if args.task_name in ["SNLI", "MNLI"]:
selected_id = int(selected_id)
record = train_numeric[selected_id]
confidence = dataframe.iloc[idx]["confidence"]
variability = dataframe.iloc[idx]["variability"]
correctness = dataframe.iloc[idx]["correct."]
label = record["label"]
# Grouping 1 (based on correctness values):
# correct_group = correct_label_groups[(label,correctness)]
correct_group = correct_groups[correctness]
group = correct_group
if args.task_name == "MNLI_RESPLIT":
record["group"] = group
outfile.write(json.dumps(record) + "\n")
## For validation file, randomly assign groups, making sure there are same number of groups.
## Note that validation_adjustments have to be turned off in case of random assignment of groups.
with open(os.path.join(outdir, f"dev_resplit_cartography.json"), "w") as outfile:
for guid, record in val_numeric.items():
random_group = np.random.randint(0, len(correct_groups))
record["group"] = random_group
outfile.write(json.dumps(record) + "\n")
if __name__ == "__main__":
parser = argparse.ArgumentParser()
parser.add_argument("--tag", action="store_true", help="Whether to tag datasets as ambiguous, hard or easy")
parser.add_argument("--compute", action="store_true", help="Whether to compute td stats or load them")
parser.add_argument("--filter",
action="store_true",
help="Whether to filter data subsets based on specified `metric`.")
parser.add_argument("--plot",
action="store_true",
help="Whether to plot data maps and save as `pdf`.")
parser.add_argument("--model_dir",
"-o",
required=True,
type=os.path.abspath,
help="Directory where model training dynamics stats reside.")
parser.add_argument("--data_dir",
"-d",
default="/Users/swabhas/data/glue/WINOGRANDE/xl/",
type=os.path.abspath,
help="Directory where data for task resides.")
parser.add_argument("--train_file",
default=None,
type=os.path.abspath,
help="Full path to train file.")
parser.add_argument("--val_file",
default=None,
type=os.path.abspath,
help="Full path to validation/test file.")
parser.add_argument("--plots_dir",
default="./cartography/",
type=os.path.abspath,
help="Directory where plots are to be saved.")
parser.add_argument("--task_name",
"-t",
default="WINOGRANDE",
choices=("AMAZON", "SNLI", "MNLI", "MNLI_RESPLIT", "QNLI", "WINOGRANDE"),
help="Which task are we plotting or filtering for.")
parser.add_argument('--metric',
choices=('threshold_closeness',
'confidence',
'variability',
'correctness',
'forgetfulness'),
help="Metric to filter data by.",)
parser.add_argument("--include_ci",
action="store_true",
help="Compute the confidence interval for variability.")
parser.add_argument("--filtering_output_dir",
"-f",
default="./filtered/",
type=os.path.abspath,
help="Output directory where filtered datasets are to be written.")
parser.add_argument("--tagging_output_dir",
default="./tagged/",
type=os.path.abspath,
help="Output directory where tagger datasets are to be written.")
parser.add_argument("--worst",
action="store_true",
help="Select from the opposite end of the spectrum acc. to metric,"
"for baselines")
parser.add_argument("--both_ends",
action="store_true",
help="Select from both ends of the spectrum acc. to metric,")
parser.add_argument("--burn_out",
type=int,
default=100,
help="# Epochs for which to compute train dynamics.")
parser.add_argument("--model",
default="RoBERTa",
help="Model for which data map is being plotted")
parser.add_argument("--artifact", type=str,
help="name of hue metric corresponding to artifact")
args = parser.parse_args()
training_dynamics = read_training_dynamics(args.model_dir,
strip_last=True if args.task_name in ["QNLI"] else False,
burn_out=args.burn_out if args.burn_out < 100 else None)
total_epochs = len(list(training_dynamics.values())[0]["logits"])
# Compute or load train_dy_metrics.
burn_out_str = f"_{args.burn_out}" if args.burn_out != 100 else ""
train_dy_filename = os.path.join(args.model_dir, f"td_metrics{burn_out_str}.jsonl")
if os.path.exists(train_dy_filename):
logger.info(f"Metrics based on Training Dynamics being read from {train_dy_filename}")
train_dy_metrics = pd.read_json(train_dy_filename, lines=True)
else:
train_dy_metrics, _ = compute_train_dy_metrics(training_dynamics, args)
train_dy_metrics.to_json(train_dy_filename,
orient='records',
lines=True)
logger.info(f"Metrics based on Training Dynamics written to {train_dy_filename}")
print(len(train_dy_metrics))
if args.tag:
assert args.tagging_output_dir
if not os.path.exists(args.tagging_output_dir):
os.makedirs(args.tagging_output_dir)
tag_data(args, train_dy_metrics, args.tagging_output_dir, model=args.model)
if args.plot:
assert args.plots_dir
if not os.path.exists(args.plots_dir):
os.makedirs(args.plots_dir)
plot_data_map(args, train_dy_metrics, args.plots_dir, title=args.task_name, show_hist=False, model=args.model, hue_metric=args.artifact)
| 18,898 | 40.174292 | 140 | py |
robust-transformers | robust-transformers-main/examples/pytorch/text-classification/run_xnli.py | #!/usr/bin/env python
# coding=utf-8
# Copyright 2018 The Google AI Language Team Authors and The HuggingFace Inc. team.
# Copyright (c) 2018, NVIDIA CORPORATION. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
""" Finetuning multi-lingual models on XNLI (e.g. Bert, DistilBERT, XLM).
Adapted from `examples/text-classification/run_glue.py`"""
import logging
import os
import random
import sys
from dataclasses import dataclass, field
from typing import Optional
import datasets
import numpy as np
from datasets import load_dataset, load_metric
import transformers
from transformers import (
AutoConfig,
AutoModelForSequenceClassification,
AutoTokenizer,
DataCollatorWithPadding,
EvalPrediction,
HfArgumentParser,
Trainer,
TrainingArguments,
default_data_collator,
set_seed,
)
from transformers.trainer_utils import get_last_checkpoint
from transformers.utils import check_min_version
from transformers.utils.versions import require_version
# Will error if the minimal version of Transformers is not installed. Remove at your own risks.
check_min_version("4.18.0.dev0")
require_version("datasets>=1.8.0", "To fix: pip install -r examples/pytorch/text-classification/requirements.txt")
logger = logging.getLogger(__name__)
@dataclass
class DataTrainingArguments:
"""
Arguments pertaining to what data we are going to input our model for training and eval.
Using `HfArgumentParser` we can turn this class
into argparse arguments to be able to specify them on
the command line.
"""
max_seq_length: Optional[int] = field(
default=128,
metadata={
"help": "The maximum total input sequence length after tokenization. Sequences longer "
"than this will be truncated, sequences shorter will be padded."
},
)
overwrite_cache: bool = field(
default=False, metadata={"help": "Overwrite the cached preprocessed datasets or not."}
)
pad_to_max_length: bool = field(
default=True,
metadata={
"help": "Whether to pad all samples to `max_seq_length`. "
"If False, will pad the samples dynamically when batching to the maximum length in the batch."
},
)
max_train_samples: Optional[int] = field(
default=None,
metadata={
"help": "For debugging purposes or quicker training, truncate the number of training examples to this "
"value if set."
},
)
max_eval_samples: Optional[int] = field(
default=None,
metadata={
"help": "For debugging purposes or quicker training, truncate the number of evaluation examples to this "
"value if set."
},
)
max_predict_samples: Optional[int] = field(
default=None,
metadata={
"help": "For debugging purposes or quicker training, truncate the number of prediction examples to this "
"value if set."
},
)
server_ip: Optional[str] = field(default=None, metadata={"help": "For distant debugging."})
server_port: Optional[str] = field(default=None, metadata={"help": "For distant debugging."})
@dataclass
class ModelArguments:
"""
Arguments pertaining to which model/config/tokenizer we are going to fine-tune from.
"""
model_name_or_path: str = field(
default=None, metadata={"help": "Path to pretrained model or model identifier from huggingface.co/models"}
)
language: str = field(
default=None, metadata={"help": "Evaluation language. Also train language if `train_language` is set to None."}
)
train_language: Optional[str] = field(
default=None, metadata={"help": "Train language if it is different from the evaluation language."}
)
config_name: Optional[str] = field(
default=None, metadata={"help": "Pretrained config name or path if not the same as model_name"}
)
tokenizer_name: Optional[str] = field(
default=None, metadata={"help": "Pretrained tokenizer name or path if not the same as model_name"}
)
cache_dir: Optional[str] = field(
default=None,
metadata={"help": "Where do you want to store the pretrained models downloaded from huggingface.co"},
)
do_lower_case: Optional[bool] = field(
default=False,
metadata={"help": "arg to indicate if tokenizer should do lower case in AutoTokenizer.from_pretrained()"},
)
use_fast_tokenizer: bool = field(
default=True,
metadata={"help": "Whether to use one of the fast tokenizer (backed by the tokenizers library) or not."},
)
model_revision: str = field(
default="main",
metadata={"help": "The specific model version to use (can be a branch name, tag name or commit id)."},
)
use_auth_token: bool = field(
default=False,
metadata={
"help": "Will use the token generated when running `transformers-cli login` (necessary to use this script "
"with private models)."
},
)
def main():
# See all possible arguments in src/transformers/training_args.py
# or by passing the --help flag to this script.
# We now keep distinct sets of args, for a cleaner separation of concerns.
parser = HfArgumentParser((ModelArguments, DataTrainingArguments, TrainingArguments))
model_args, data_args, training_args = parser.parse_args_into_dataclasses()
# Setup distant debugging if needed
if data_args.server_ip and data_args.server_port:
# Distant debugging - see https://code.visualstudio.com/docs/python/debugging#_attach-to-a-local-script
import ptvsd
print("Waiting for debugger attach")
ptvsd.enable_attach(address=(data_args.server_ip, data_args.server_port), redirect_output=True)
ptvsd.wait_for_attach()
# Setup logging
logging.basicConfig(
format="%(asctime)s - %(levelname)s - %(name)s - %(message)s",
datefmt="%m/%d/%Y %H:%M:%S",
handlers=[logging.StreamHandler(sys.stdout)],
)
log_level = training_args.get_process_log_level()
logger.setLevel(log_level)
datasets.utils.logging.set_verbosity(log_level)
transformers.utils.logging.set_verbosity(log_level)
transformers.utils.logging.enable_default_handler()
transformers.utils.logging.enable_explicit_format()
# Log on each process the small summary:
logger.warning(
f"Process rank: {training_args.local_rank}, device: {training_args.device}, n_gpu: {training_args.n_gpu}"
+ f"distributed training: {bool(training_args.local_rank != -1)}, 16-bits training: {training_args.fp16}"
)
logger.info(f"Training/evaluation parameters {training_args}")
# Detecting last checkpoint.
last_checkpoint = None
if os.path.isdir(training_args.output_dir) and training_args.do_train and not training_args.overwrite_output_dir:
last_checkpoint = get_last_checkpoint(training_args.output_dir)
if last_checkpoint is None and len(os.listdir(training_args.output_dir)) > 0:
raise ValueError(
f"Output directory ({training_args.output_dir}) already exists and is not empty. "
"Use --overwrite_output_dir to overcome."
)
elif last_checkpoint is not None:
logger.info(
f"Checkpoint detected, resuming training at {last_checkpoint}. To avoid this behavior, change "
"the `--output_dir` or add `--overwrite_output_dir` to train from scratch."
)
# Set seed before initializing model.
set_seed(training_args.seed)
# In distributed training, the load_dataset function guarantees that only one local process can concurrently
# download the dataset.
# Downloading and loading xnli dataset from the hub.
if training_args.do_train:
if model_args.train_language is None:
train_dataset = load_dataset("xnli", model_args.language, split="train", cache_dir=model_args.cache_dir)
else:
train_dataset = load_dataset(
"xnli", model_args.train_language, split="train", cache_dir=model_args.cache_dir
)
label_list = train_dataset.features["label"].names
if training_args.do_eval:
eval_dataset = load_dataset("xnli", model_args.language, split="validation", cache_dir=model_args.cache_dir)
label_list = eval_dataset.features["label"].names
if training_args.do_predict:
predict_dataset = load_dataset("xnli", model_args.language, split="test", cache_dir=model_args.cache_dir)
label_list = predict_dataset.features["label"].names
# Labels
num_labels = len(label_list)
# Load pretrained model and tokenizer
# In distributed training, the .from_pretrained methods guarantee that only one local process can concurrently
# download model & vocab.
config = AutoConfig.from_pretrained(
model_args.config_name if model_args.config_name else model_args.model_name_or_path,
num_labels=num_labels,
finetuning_task="xnli",
cache_dir=model_args.cache_dir,
revision=model_args.model_revision,
use_auth_token=True if model_args.use_auth_token else None,
)
tokenizer = AutoTokenizer.from_pretrained(
model_args.tokenizer_name if model_args.tokenizer_name else model_args.model_name_or_path,
do_lower_case=model_args.do_lower_case,
cache_dir=model_args.cache_dir,
use_fast=model_args.use_fast_tokenizer,
revision=model_args.model_revision,
use_auth_token=True if model_args.use_auth_token else None,
)
model = AutoModelForSequenceClassification.from_pretrained(
model_args.model_name_or_path,
from_tf=bool(".ckpt" in model_args.model_name_or_path),
config=config,
cache_dir=model_args.cache_dir,
revision=model_args.model_revision,
use_auth_token=True if model_args.use_auth_token else None,
)
# Preprocessing the datasets
# Padding strategy
if data_args.pad_to_max_length:
padding = "max_length"
else:
# We will pad later, dynamically at batch creation, to the max sequence length in each batch
padding = False
def preprocess_function(examples):
# Tokenize the texts
return tokenizer(
examples["premise"],
examples["hypothesis"],
padding=padding,
max_length=data_args.max_seq_length,
truncation=True,
)
if training_args.do_train:
if data_args.max_train_samples is not None:
train_dataset = train_dataset.select(range(data_args.max_train_samples))
with training_args.main_process_first(desc="train dataset map pre-processing"):
train_dataset = train_dataset.map(
preprocess_function,
batched=True,
load_from_cache_file=not data_args.overwrite_cache,
desc="Running tokenizer on train dataset",
)
# Log a few random samples from the training set:
for index in random.sample(range(len(train_dataset)), 3):
logger.info(f"Sample {index} of the training set: {train_dataset[index]}.")
if training_args.do_eval:
if data_args.max_eval_samples is not None:
eval_dataset = eval_dataset.select(range(data_args.max_eval_samples))
with training_args.main_process_first(desc="validation dataset map pre-processing"):
eval_dataset = eval_dataset.map(
preprocess_function,
batched=True,
load_from_cache_file=not data_args.overwrite_cache,
desc="Running tokenizer on validation dataset",
)
if training_args.do_predict:
if data_args.max_predict_samples is not None:
predict_dataset = predict_dataset.select(range(data_args.max_predict_samples))
with training_args.main_process_first(desc="prediction dataset map pre-processing"):
predict_dataset = predict_dataset.map(
preprocess_function,
batched=True,
load_from_cache_file=not data_args.overwrite_cache,
desc="Running tokenizer on prediction dataset",
)
# Get the metric function
metric = load_metric("xnli")
# You can define your custom compute_metrics function. It takes an `EvalPrediction` object (a namedtuple with a
# predictions and label_ids field) and has to return a dictionary string to float.
def compute_metrics(p: EvalPrediction):
preds = p.predictions[0] if isinstance(p.predictions, tuple) else p.predictions
preds = np.argmax(preds, axis=1)
return metric.compute(predictions=preds, references=p.label_ids)
# Data collator will default to DataCollatorWithPadding, so we change it if we already did the padding.
if data_args.pad_to_max_length:
data_collator = default_data_collator
elif training_args.fp16:
data_collator = DataCollatorWithPadding(tokenizer, pad_to_multiple_of=8)
else:
data_collator = None
# Initialize our Trainer
trainer = Trainer(
model=model,
args=training_args,
train_dataset=train_dataset if training_args.do_train else None,
eval_dataset=eval_dataset if training_args.do_eval else None,
compute_metrics=compute_metrics,
tokenizer=tokenizer,
data_collator=data_collator,
)
# Training
if training_args.do_train:
checkpoint = None
if training_args.resume_from_checkpoint is not None:
checkpoint = training_args.resume_from_checkpoint
elif last_checkpoint is not None:
checkpoint = last_checkpoint
train_result = trainer.train(resume_from_checkpoint=checkpoint)
metrics = train_result.metrics
max_train_samples = (
data_args.max_train_samples if data_args.max_train_samples is not None else len(train_dataset)
)
metrics["train_samples"] = min(max_train_samples, len(train_dataset))
trainer.save_model() # Saves the tokenizer too for easy upload
trainer.log_metrics("train", metrics)
trainer.save_metrics("train", metrics)
trainer.save_state()
# Evaluation
if training_args.do_eval:
logger.info("*** Evaluate ***")
metrics = trainer.evaluate(eval_dataset=eval_dataset)
max_eval_samples = data_args.max_eval_samples if data_args.max_eval_samples is not None else len(eval_dataset)
metrics["eval_samples"] = min(max_eval_samples, len(eval_dataset))
trainer.log_metrics("eval", metrics)
trainer.save_metrics("eval", metrics)
# Prediction
if training_args.do_predict:
logger.info("*** Predict ***")
predictions, labels, metrics = trainer.predict(predict_dataset, metric_key_prefix="predict")
max_predict_samples = (
data_args.max_predict_samples if data_args.max_predict_samples is not None else len(predict_dataset)
)
metrics["predict_samples"] = min(max_predict_samples, len(predict_dataset))
trainer.log_metrics("predict", metrics)
trainer.save_metrics("predict", metrics)
predictions = np.argmax(predictions, axis=1)
output_predict_file = os.path.join(training_args.output_dir, "predictions.txt")
if trainer.is_world_process_zero():
with open(output_predict_file, "w") as writer:
writer.write("index\tprediction\n")
for index, item in enumerate(predictions):
item = label_list[item]
writer.write(f"{index}\t{item}\n")
if __name__ == "__main__":
main()
| 16,340 | 39.750623 | 119 | py |
robust-transformers | robust-transformers-main/examples/pytorch/text-classification/run_glue_no_trainer.py | # coding=utf-8
# Copyright 2021 The HuggingFace Inc. team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
""" Finetuning a 🤗 Transformers model for sequence classification on GLUE."""
import argparse
import logging
import math
import os
import random
from pathlib import Path
import datasets
from datasets import load_dataset, load_metric
from torch.utils.data import DataLoader
from tqdm.auto import tqdm
import transformers
from accelerate import Accelerator
from huggingface_hub import Repository
from transformers import (
AdamW,
AutoConfig,
AutoModelForSequenceClassification,
AutoTokenizer,
DataCollatorWithPadding,
PretrainedConfig,
SchedulerType,
default_data_collator,
get_scheduler,
set_seed,
)
from transformers.file_utils import get_full_repo_name
from transformers.utils.versions import require_version
logger = logging.getLogger(__name__)
require_version("datasets>=1.8.0", "To fix: pip install -r examples/pytorch/text-classification/requirements.txt")
task_to_keys = {
"cola": ("sentence", None),
"mnli": ("premise", "hypothesis"),
"mrpc": ("sentence1", "sentence2"),
"qnli": ("question", "sentence"),
"qqp": ("question1", "question2"),
"rte": ("sentence1", "sentence2"),
"sst2": ("sentence", None),
"stsb": ("sentence1", "sentence2"),
"wnli": ("sentence1", "sentence2"),
}
def parse_args():
parser = argparse.ArgumentParser(description="Finetune a transformers model on a text classification task")
parser.add_argument(
"--task_name",
type=str,
default=None,
help="The name of the glue task to train on.",
choices=list(task_to_keys.keys()),
)
parser.add_argument(
"--train_file", type=str, default=None, help="A csv or a json file containing the training data."
)
parser.add_argument(
"--validation_file", type=str, default=None, help="A csv or a json file containing the validation data."
)
parser.add_argument(
"--max_length",
type=int,
default=128,
help=(
"The maximum total input sequence length after tokenization. Sequences longer than this will be truncated,"
" sequences shorter will be padded if `--pad_to_max_lengh` is passed."
),
)
parser.add_argument(
"--pad_to_max_length",
action="store_true",
help="If passed, pad all samples to `max_length`. Otherwise, dynamic padding is used.",
)
parser.add_argument(
"--model_name_or_path",
type=str,
help="Path to pretrained model or model identifier from huggingface.co/models.",
required=True,
)
parser.add_argument(
"--use_slow_tokenizer",
action="store_true",
help="If passed, will use a slow tokenizer (not backed by the 🤗 Tokenizers library).",
)
parser.add_argument(
"--per_device_train_batch_size",
type=int,
default=8,
help="Batch size (per device) for the training dataloader.",
)
parser.add_argument(
"--per_device_eval_batch_size",
type=int,
default=8,
help="Batch size (per device) for the evaluation dataloader.",
)
parser.add_argument(
"--learning_rate",
type=float,
default=5e-5,
help="Initial learning rate (after the potential warmup period) to use.",
)
parser.add_argument("--weight_decay", type=float, default=0.0, help="Weight decay to use.")
parser.add_argument("--num_train_epochs", type=int, default=3, help="Total number of training epochs to perform.")
parser.add_argument(
"--max_train_steps",
type=int,
default=None,
help="Total number of training steps to perform. If provided, overrides num_train_epochs.",
)
parser.add_argument(
"--gradient_accumulation_steps",
type=int,
default=1,
help="Number of updates steps to accumulate before performing a backward/update pass.",
)
parser.add_argument(
"--lr_scheduler_type",
type=SchedulerType,
default="linear",
help="The scheduler type to use.",
choices=["linear", "cosine", "cosine_with_restarts", "polynomial", "constant", "constant_with_warmup"],
)
parser.add_argument(
"--num_warmup_steps", type=int, default=0, help="Number of steps for the warmup in the lr scheduler."
)
parser.add_argument("--output_dir", type=str, default=None, help="Where to store the final model.")
parser.add_argument("--seed", type=int, default=None, help="A seed for reproducible training.")
parser.add_argument("--push_to_hub", action="store_true", help="Whether or not to push the model to the Hub.")
parser.add_argument(
"--hub_model_id", type=str, help="The name of the repository to keep in sync with the local `output_dir`."
)
parser.add_argument("--hub_token", type=str, help="The token to use to push to the Model Hub.")
args = parser.parse_args()
# Sanity checks
if args.task_name is None and args.train_file is None and args.validation_file is None:
raise ValueError("Need either a task name or a training/validation file.")
else:
if args.train_file is not None:
extension = args.train_file.split(".")[-1]
assert extension in ["csv", "json"], "`train_file` should be a csv or a json file."
if args.validation_file is not None:
extension = args.validation_file.split(".")[-1]
assert extension in ["csv", "json"], "`validation_file` should be a csv or a json file."
if args.push_to_hub:
assert args.output_dir is not None, "Need an `output_dir` to create a repo when `--push_to_hub` is passed."
return args
def main():
args = parse_args()
# Initialize the accelerator. We will let the accelerator handle device placement for us in this example.
accelerator = Accelerator()
# Make one log on every process with the configuration for debugging.
logging.basicConfig(
format="%(asctime)s - %(levelname)s - %(name)s - %(message)s",
datefmt="%m/%d/%Y %H:%M:%S",
level=logging.INFO,
)
logger.info(accelerator.state)
# Setup logging, we only want one process per machine to log things on the screen.
# accelerator.is_local_main_process is only True for one process per machine.
logger.setLevel(logging.INFO if accelerator.is_local_main_process else logging.ERROR)
if accelerator.is_local_main_process:
datasets.utils.logging.set_verbosity_warning()
transformers.utils.logging.set_verbosity_info()
else:
datasets.utils.logging.set_verbosity_error()
transformers.utils.logging.set_verbosity_error()
# If passed along, set the training seed now.
if args.seed is not None:
set_seed(args.seed)
# Handle the repository creation
if accelerator.is_main_process:
if args.push_to_hub:
if args.hub_model_id is None:
repo_name = get_full_repo_name(Path(args.output_dir).name, token=args.hub_token)
else:
repo_name = args.hub_model_id
repo = Repository(args.output_dir, clone_from=repo_name)
elif args.output_dir is not None:
os.makedirs(args.output_dir, exist_ok=True)
accelerator.wait_for_everyone()
# Get the datasets: you can either provide your own CSV/JSON training and evaluation files (see below)
# or specify a GLUE benchmark task (the dataset will be downloaded automatically from the datasets Hub).
# For CSV/JSON files, this script will use as labels the column called 'label' and as pair of sentences the
# sentences in columns called 'sentence1' and 'sentence2' if such column exists or the first two columns not named
# label if at least two columns are provided.
# If the CSVs/JSONs contain only one non-label column, the script does single sentence classification on this
# single column. You can easily tweak this behavior (see below)
# In distributed training, the load_dataset function guarantee that only one local process can concurrently
# download the dataset.
if args.task_name is not None:
# Downloading and loading a dataset from the hub.
raw_datasets = load_dataset("glue", args.task_name)
else:
# Loading the dataset from local csv or json file.
data_files = {}
if args.train_file is not None:
data_files["train"] = args.train_file
if args.validation_file is not None:
data_files["validation"] = args.validation_file
extension = (args.train_file if args.train_file is not None else args.valid_file).split(".")[-1]
raw_datasets = load_dataset(extension, data_files=data_files)
# See more about loading any type of standard or custom dataset at
# https://huggingface.co/docs/datasets/loading_datasets.html.
# Labels
if args.task_name is not None:
is_regression = args.task_name == "stsb"
if not is_regression:
label_list = raw_datasets["train"].features["label"].names
num_labels = len(label_list)
else:
num_labels = 1
else:
# Trying to have good defaults here, don't hesitate to tweak to your needs.
is_regression = raw_datasets["train"].features["label"].dtype in ["float32", "float64"]
if is_regression:
num_labels = 1
else:
# A useful fast method:
# https://huggingface.co/docs/datasets/package_reference/main_classes.html#datasets.Dataset.unique
label_list = raw_datasets["train"].unique("label")
label_list.sort() # Let's sort it for determinism
num_labels = len(label_list)
# Load pretrained model and tokenizer
#
# In distributed training, the .from_pretrained methods guarantee that only one local process can concurrently
# download model & vocab.
config = AutoConfig.from_pretrained(args.model_name_or_path, num_labels=num_labels, finetuning_task=args.task_name)
tokenizer = AutoTokenizer.from_pretrained(args.model_name_or_path, use_fast=not args.use_slow_tokenizer)
model = AutoModelForSequenceClassification.from_pretrained(
args.model_name_or_path,
from_tf=bool(".ckpt" in args.model_name_or_path),
config=config,
)
# Preprocessing the datasets
if args.task_name is not None:
sentence1_key, sentence2_key = task_to_keys[args.task_name]
else:
# Again, we try to have some nice defaults but don't hesitate to tweak to your use case.
non_label_column_names = [name for name in raw_datasets["train"].column_names if name != "label"]
if "sentence1" in non_label_column_names and "sentence2" in non_label_column_names:
sentence1_key, sentence2_key = "sentence1", "sentence2"
else:
if len(non_label_column_names) >= 2:
sentence1_key, sentence2_key = non_label_column_names[:2]
else:
sentence1_key, sentence2_key = non_label_column_names[0], None
# Some models have set the order of the labels to use, so let's make sure we do use it.
label_to_id = None
if (
model.config.label2id != PretrainedConfig(num_labels=num_labels).label2id
and args.task_name is not None
and not is_regression
):
# Some have all caps in their config, some don't.
label_name_to_id = {k.lower(): v for k, v in model.config.label2id.items()}
if list(sorted(label_name_to_id.keys())) == list(sorted(label_list)):
logger.info(
f"The configuration of the model provided the following label correspondence: {label_name_to_id}. "
"Using it!"
)
label_to_id = {i: label_name_to_id[label_list[i]] for i in range(num_labels)}
else:
logger.warning(
"Your model seems to have been trained with labels, but they don't match the dataset: ",
f"model labels: {list(sorted(label_name_to_id.keys()))}, dataset labels: {list(sorted(label_list))}."
"\nIgnoring the model labels as a result.",
)
elif args.task_name is None:
label_to_id = {v: i for i, v in enumerate(label_list)}
if label_to_id is not None:
model.config.label2id = label_to_id
model.config.id2label = {id: label for label, id in config.label2id.items()}
elif args.task_name is not None and not is_regression:
model.config.label2id = {l: i for i, l in enumerate(label_list)}
model.config.id2label = {id: label for label, id in config.label2id.items()}
padding = "max_length" if args.pad_to_max_length else False
def preprocess_function(examples):
# Tokenize the texts
texts = (
(examples[sentence1_key],) if sentence2_key is None else (examples[sentence1_key], examples[sentence2_key])
)
result = tokenizer(*texts, padding=padding, max_length=args.max_length, truncation=True)
if "label" in examples:
if label_to_id is not None:
# Map labels to IDs (not necessary for GLUE tasks)
result["labels"] = [label_to_id[l] for l in examples["label"]]
else:
# In all cases, rename the column to labels because the model will expect that.
result["labels"] = examples["label"]
return result
with accelerator.main_process_first():
processed_datasets = raw_datasets.map(
preprocess_function,
batched=True,
remove_columns=raw_datasets["train"].column_names,
desc="Running tokenizer on dataset",
)
train_dataset = processed_datasets["train"]
eval_dataset = processed_datasets["validation_matched" if args.task_name == "mnli" else "validation"]
# Log a few random samples from the training set:
for index in random.sample(range(len(train_dataset)), 3):
logger.info(f"Sample {index} of the training set: {train_dataset[index]}.")
# DataLoaders creation:
if args.pad_to_max_length:
# If padding was already done ot max length, we use the default data collator that will just convert everything
# to tensors.
data_collator = default_data_collator
else:
# Otherwise, `DataCollatorWithPadding` will apply dynamic padding for us (by padding to the maximum length of
# the samples passed). When using mixed precision, we add `pad_to_multiple_of=8` to pad all tensors to multiple
# of 8s, which will enable the use of Tensor Cores on NVIDIA hardware with compute capability >= 7.5 (Volta).
data_collator = DataCollatorWithPadding(tokenizer, pad_to_multiple_of=(8 if accelerator.use_fp16 else None))
train_dataloader = DataLoader(
train_dataset, shuffle=True, collate_fn=data_collator, batch_size=args.per_device_train_batch_size
)
eval_dataloader = DataLoader(eval_dataset, collate_fn=data_collator, batch_size=args.per_device_eval_batch_size)
# Optimizer
# Split weights in two groups, one with weight decay and the other not.
no_decay = ["bias", "LayerNorm.weight"]
optimizer_grouped_parameters = [
{
"params": [p for n, p in model.named_parameters() if not any(nd in n for nd in no_decay)],
"weight_decay": args.weight_decay,
},
{
"params": [p for n, p in model.named_parameters() if any(nd in n for nd in no_decay)],
"weight_decay": 0.0,
},
]
optimizer = AdamW(optimizer_grouped_parameters, lr=args.learning_rate)
# Prepare everything with our `accelerator`.
model, optimizer, train_dataloader, eval_dataloader = accelerator.prepare(
model, optimizer, train_dataloader, eval_dataloader
)
# Note -> the training dataloader needs to be prepared before we grab his length below (cause its length will be
# shorter in multiprocess)
# Scheduler and math around the number of training steps.
num_update_steps_per_epoch = math.ceil(len(train_dataloader) / args.gradient_accumulation_steps)
if args.max_train_steps is None:
args.max_train_steps = args.num_train_epochs * num_update_steps_per_epoch
else:
args.num_train_epochs = math.ceil(args.max_train_steps / num_update_steps_per_epoch)
lr_scheduler = get_scheduler(
name=args.lr_scheduler_type,
optimizer=optimizer,
num_warmup_steps=args.num_warmup_steps,
num_training_steps=args.max_train_steps,
)
# Get the metric function
if args.task_name is not None:
metric = load_metric("glue", args.task_name)
else:
metric = load_metric("accuracy")
# Train!
total_batch_size = args.per_device_train_batch_size * accelerator.num_processes * args.gradient_accumulation_steps
logger.info("***** Running training *****")
logger.info(f" Num examples = {len(train_dataset)}")
logger.info(f" Num Epochs = {args.num_train_epochs}")
logger.info(f" Instantaneous batch size per device = {args.per_device_train_batch_size}")
logger.info(f" Total train batch size (w. parallel, distributed & accumulation) = {total_batch_size}")
logger.info(f" Gradient Accumulation steps = {args.gradient_accumulation_steps}")
logger.info(f" Total optimization steps = {args.max_train_steps}")
# Only show the progress bar once on each machine.
progress_bar = tqdm(range(args.max_train_steps), disable=not accelerator.is_local_main_process)
completed_steps = 0
for epoch in range(args.num_train_epochs):
model.train()
for step, batch in enumerate(train_dataloader):
outputs = model(**batch)
loss = outputs.loss
loss = loss / args.gradient_accumulation_steps
accelerator.backward(loss)
if step % args.gradient_accumulation_steps == 0 or step == len(train_dataloader) - 1:
optimizer.step()
lr_scheduler.step()
optimizer.zero_grad()
progress_bar.update(1)
completed_steps += 1
if completed_steps >= args.max_train_steps:
break
model.eval()
for step, batch in enumerate(eval_dataloader):
outputs = model(**batch)
predictions = outputs.logits.argmax(dim=-1) if not is_regression else outputs.logits.squeeze()
metric.add_batch(
predictions=accelerator.gather(predictions),
references=accelerator.gather(batch["labels"]),
)
eval_metric = metric.compute()
logger.info(f"epoch {epoch}: {eval_metric}")
if args.push_to_hub and epoch < args.num_train_epochs - 1:
accelerator.wait_for_everyone()
unwrapped_model = accelerator.unwrap_model(model)
unwrapped_model.save_pretrained(args.output_dir, save_function=accelerator.save)
if accelerator.is_main_process:
tokenizer.save_pretrained(args.output_dir)
repo.push_to_hub(
commit_message=f"Training in progress epoch {epoch}", blocking=False, auto_lfs_prune=True
)
if args.output_dir is not None:
accelerator.wait_for_everyone()
unwrapped_model = accelerator.unwrap_model(model)
unwrapped_model.save_pretrained(args.output_dir, save_function=accelerator.save)
if accelerator.is_main_process:
tokenizer.save_pretrained(args.output_dir)
if args.push_to_hub:
repo.push_to_hub(commit_message="End of training", auto_lfs_prune=True)
if args.task_name == "mnli":
# Final evaluation on mismatched validation set
eval_dataset = processed_datasets["validation_mismatched"]
eval_dataloader = DataLoader(
eval_dataset, collate_fn=data_collator, batch_size=args.per_device_eval_batch_size
)
eval_dataloader = accelerator.prepare(eval_dataloader)
model.eval()
for step, batch in enumerate(eval_dataloader):
outputs = model(**batch)
predictions = outputs.logits.argmax(dim=-1)
metric.add_batch(
predictions=accelerator.gather(predictions),
references=accelerator.gather(batch["labels"]),
)
eval_metric = metric.compute()
logger.info(f"mnli-mm: {eval_metric}")
if __name__ == "__main__":
main()
| 21,165 | 42.020325 | 119 | py |
robust-transformers | robust-transformers-main/examples/pytorch/speech-pretraining/run_wav2vec2_pretraining_no_trainer.py | #!/usr/bin/env python
# coding=utf-8
# Copyright 2021 The HuggingFace Inc. team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
""" Pre-Training a 🤗 Wav2Vec2 model on unlabeled audio data """
import argparse
import logging
import math
import os
from dataclasses import dataclass
from pathlib import Path
from typing import Dict, List, Optional, Union
import datasets
import torch
from datasets import DatasetDict, concatenate_datasets, load_dataset
from torch.utils.data.dataloader import DataLoader
from tqdm.auto import tqdm
import transformers
from accelerate import Accelerator
from huggingface_hub import Repository
from transformers import (
AdamW,
SchedulerType,
Wav2Vec2Config,
Wav2Vec2FeatureExtractor,
Wav2Vec2ForPreTraining,
get_scheduler,
is_wandb_available,
set_seed,
)
from transformers.file_utils import get_full_repo_name
from transformers.models.wav2vec2.modeling_wav2vec2 import _compute_mask_indices, _sample_negative_indices
logger = logging.getLogger(__name__)
def parse_args():
parser = argparse.ArgumentParser(description="Finetune a transformers model on a text classification task")
parser.add_argument(
"--dataset_name",
type=str,
default=None,
help="The name of the dataset to use (via the datasets library).",
)
parser.add_argument(
"--dataset_config_names",
nargs="+",
type=str,
required=True,
help="The configuration names of the dataset to use (via the datasets library).",
)
parser.add_argument(
"--dataset_split_names",
nargs="+",
type=str,
required=True,
help="The names of the training data set splits to use (via the datasets library).",
)
parser.add_argument(
"--preprocessing_num_workers",
type=int,
default=None,
help="The number of processes to use for the preprocessing.",
)
parser.add_argument(
"--overwrite_cache", action="store_true", help="Overwrite the cached training and evaluation sets"
)
parser.add_argument(
"--preprocessing_only",
action="store_true",
help="Only run the preprocessing script to be cached for future use",
)
parser.add_argument(
"--cache_dir",
type=str,
default=None,
help="Where do you want to store the pretrained models downloaded from huggingface.co",
)
parser.add_argument(
"--validation_split_percentage",
type=int,
default=1,
help="Percentage of training data that should be used for validation if no validation is present in dataset.",
)
parser.add_argument(
"--logging_steps",
type=int,
default=500,
help="Number of steps between each logging",
)
parser.add_argument(
"--saving_steps",
type=int,
default=500,
help="Number of steps between each logging",
)
parser.add_argument(
"--audio_column_name",
type=str,
default="audio",
help="Column in the dataset that contains speech file path. Defaults to 'audio'",
)
parser.add_argument(
"--model_name_or_path",
type=str,
help="Path to pretrained model or model identifier from huggingface.co/models.",
required=True,
)
parser.add_argument(
"--config_name",
type=str,
default=None,
help="Pretrained config name or path if not the same as model_name",
)
parser.add_argument(
"--train_cache_file_name",
type=str,
default=None,
help="Path to the train cached file name",
)
parser.add_argument(
"--validation_cache_file_name",
type=str,
default=None,
help="Path to the validation cached file name",
)
parser.add_argument(
"--per_device_train_batch_size",
type=int,
default=8,
help="Batch size (per device) for the training dataloader.",
)
parser.add_argument(
"--per_device_eval_batch_size",
type=int,
default=8,
help="Batch size (per device) for the evaluation dataloader.",
)
parser.add_argument(
"--learning_rate",
type=float,
default=5e-5,
help="Initial learning rate (after the potential warmup period) to use.",
)
parser.add_argument("--weight_decay", type=float, default=0.0, help="Weight decay to use.")
parser.add_argument("--num_train_epochs", type=int, default=3, help="Total number of training epochs to perform.")
parser.add_argument(
"--max_train_steps",
type=int,
default=None,
help="Total number of training steps to perform. If provided, overrides num_train_epochs.",
)
parser.add_argument(
"--gradient_accumulation_steps",
type=int,
default=1,
help="Number of updates steps to accumulate before performing a backward/update pass.",
)
parser.add_argument(
"--gradient_checkpointing",
action="store_true",
help="If True, use gradient checkpointing to save memory at the expense of slower backward pass.",
)
parser.add_argument(
"--lr_scheduler_type",
type=SchedulerType,
default="linear",
help="The scheduler type to use.",
choices=["linear", "cosine", "cosine_with_restarts", "polynomial", "constant", "constant_with_warmup"],
)
parser.add_argument(
"--num_warmup_steps", type=int, default=0, help="Number of steps for the warmup in the lr scheduler."
)
parser.add_argument("--output_dir", type=str, default=None, help="Where to store the final model.")
parser.add_argument("--seed", type=int, default=0, help="A seed for reproducible training.")
parser.add_argument(
"--max_gumbel_temperature",
type=float,
default=2.0,
help="Maximum temperature for gumbel softmax.",
)
parser.add_argument(
"--min_gumbel_temperature",
type=float,
default=0.5,
help="Minimum temperature for gumbel softmax.",
)
parser.add_argument(
"--gumbel_temperature_decay", type=float, default=0.999995, help="Decay of gumbel temperature during training."
)
parser.add_argument(
"--max_duration_in_seconds",
type=float,
default=5.0,
help="Filter out audio files that are longer than `max_duration_in_seconds` seconds",
)
parser.add_argument(
"--min_duration_in_seconds",
type=float,
default=3.0,
help="Filter out audio files that are shorter than `min_duration_in_seconds` seconds",
)
parser.add_argument(
"--pad_to_multiple_of",
type=int,
default=None,
help="If set will pad the sequence to a multiple of the provided value. This is especially useful to enable the use of Tensor Cores on NVIDIA hardware with compute capability >= 7.5 (Volta).",
)
parser.add_argument(
"--adam_beta1",
type=float,
default=0.9,
help="Beta1 for AdamW optimizer",
)
parser.add_argument(
"--adam_beta2",
type=float,
default=0.999,
help="Beta2 for AdamW optimizer",
)
parser.add_argument(
"--adam_epsilon",
type=float,
default=1e-8,
help="Epsilon for AdamW optimizer",
)
parser.add_argument("--push_to_hub", action="store_true", help="Whether or not to push the model to the Hub.")
parser.add_argument(
"--hub_model_id", type=str, help="The name of the repository to keep in sync with the local `output_dir`."
)
parser.add_argument("--hub_token", type=str, help="The token to use to push to the Model Hub.")
args = parser.parse_args()
if args.push_to_hub:
assert args.output_dir is not None, "Need an `output_dir` to create a repo when `--push_to_hub` is passed."
if args.output_dir is not None:
os.makedirs(args.output_dir, exist_ok=True)
return args
@dataclass
class DataCollatorForWav2Vec2Pretraining:
"""
Data collator that will dynamically pad the inputs received and prepare masked indices
for self-supervised pretraining.
Args:
model (:class:`~transformers.Wav2Vec2ForPreTraining`):
The Wav2Vec2 model used for pretraining. The data collator needs to have access
to config and ``_get_feat_extract_output_lengths`` function for correct padding.
feature_extractor (:class:`~transformers.Wav2Vec2FeatureExtractor`):
The processor used for proccessing the data.
padding (:obj:`bool`, :obj:`str` or :class:`~transformers.tokenization_utils_base.PaddingStrategy`, `optional`, defaults to :obj:`True`):
Select a strategy to pad the returned sequences (according to the model's padding side and padding index)
among:
* :obj:`True` or :obj:`'longest'`: Pad to the longest sequence in the batch (or no padding if only a single
sequence if provided).
* :obj:`'max_length'`: Pad to a maximum length specified with the argument :obj:`max_length` or to the
maximum acceptable input length for the model if that argument is not provided.
* :obj:`False` or :obj:`'do_not_pad'` (default): No padding (i.e., can output a batch with sequences of
different lengths).
max_length (:obj:`int`, `optional`):
Maximum length of the ``input_values`` of the returned list and optionally padding length (see above).
pad_to_multiple_of (:obj:`int`, `optional`):
If set will pad the sequence to a multiple of the provided value.
This is especially useful to enable the use of Tensor Cores on NVIDIA hardware with compute capability >=
7.5 (Volta).
"""
model: Wav2Vec2ForPreTraining
feature_extractor: Wav2Vec2FeatureExtractor
padding: Union[bool, str] = "longest"
pad_to_multiple_of: Optional[int] = None
def __call__(self, features: List[Dict[str, Union[List[int], torch.Tensor]]]) -> Dict[str, torch.Tensor]:
# reformat list to dict and set to pytorch format
batch = self.feature_extractor.pad(
features,
padding=self.padding,
pad_to_multiple_of=self.pad_to_multiple_of,
return_tensors="pt",
)
device = batch["input_values"].device
batch_size = batch["input_values"].shape[0]
mask_indices_seq_length = self.model._get_feat_extract_output_lengths(batch["input_values"].shape[-1])
# make sure masked sequence length is a Python scalar
mask_indices_seq_length = int(mask_indices_seq_length)
# make sure that no loss is computed on padded inputs
if batch.get("attention_mask") is not None:
# compute real output lengths according to convolution formula
batch["sub_attention_mask"] = self.model._get_feature_vector_attention_mask(
mask_indices_seq_length, batch["attention_mask"]
)
features_shape = (batch_size, mask_indices_seq_length)
# sample randomly masked indices
mask_time_indices = _compute_mask_indices(
features_shape,
self.model.config.mask_time_prob,
self.model.config.mask_time_length,
attention_mask=batch.get("sub_attention_mask"),
)
# sample negative indices
sampled_negative_indices = _sample_negative_indices(
features_shape,
self.model.config.num_negatives,
mask_time_indices=mask_time_indices,
)
batch["mask_time_indices"] = torch.tensor(mask_time_indices, dtype=torch.long, device=device)
batch["sampled_negative_indices"] = torch.tensor(sampled_negative_indices, dtype=torch.long, device=device)
return batch
def multiply_grads(params, c):
"""Multiplies grads by a constant *c*."""
for p in params:
if p.grad is not None:
if torch.is_tensor(c):
c = c.to(p.grad.device)
p.grad.data.mul_(c)
def get_grad_norm(params, scale=1):
"""Compute grad norm given a gradient scale."""
total_norm = 0.0
for p in params:
if p.grad is not None:
param_norm = (p.grad.detach().data / scale).norm(2)
total_norm += param_norm.item() ** 2
total_norm = total_norm**0.5
return total_norm
def main():
# See all possible arguments in src/transformers/args.py
# or by passing the --help flag to this script.
# We now keep distinct sets of args, for a cleaner separation of concerns.
args = parse_args()
# Initialize the accelerator. We will let the accelerator handle device placement for us in this example.
accelerator = Accelerator()
logger.info(accelerator.state)
# Setup logging, we only want one process per machine to log things on the screen.
# accelerator.is_local_main_process is only True for one process per machine.
logger.setLevel(logging.INFO if accelerator.is_local_main_process else logging.ERROR)
if accelerator.is_local_main_process:
datasets.utils.logging.set_verbosity_warning()
transformers.utils.logging.set_verbosity_info()
# set up weights and biases if available
if is_wandb_available():
import wandb
wandb.init(project=args.output_dir.split("/")[-1])
else:
datasets.utils.logging.set_verbosity_error()
transformers.utils.logging.set_verbosity_error()
# If passed along, set the training seed now.
if args.seed is not None:
set_seed(args.seed)
# Handle the repository creation
if accelerator.is_main_process:
if args.push_to_hub and not args.preprocessing_only:
if args.hub_model_id is None:
repo_name = get_full_repo_name(Path(args.output_dir).name, token=args.hub_token)
else:
repo_name = args.hub_model_id
repo = Repository(args.output_dir, clone_from=repo_name)
elif args.output_dir is not None:
os.makedirs(args.output_dir, exist_ok=True)
accelerator.wait_for_everyone()
# 1. Download and create train, validation dataset
# We load all dataset configuration and datset split pairs passed in
# ``args.dataset_config_names`` and ``args.dataset_split_names``
datasets_splits = []
for dataset_config_name, train_split_name in zip(args.dataset_config_names, args.dataset_split_names):
# load dataset
dataset_split = load_dataset(
args.dataset_name, dataset_config_name, split=train_split_name, cache_dir=args.cache_dir
)
datasets_splits.append(dataset_split)
# Next, we concatenate all configurations and splits into a single training dataset
raw_datasets = DatasetDict()
if len(datasets_splits) > 1:
raw_datasets["train"] = concatenate_datasets(datasets_splits).shuffle(seed=args.seed)
else:
raw_datasets["train"] = datasets_splits[0]
# Take ``args.validation_split_percentage`` from the training dataset for the validation_split_percentage
num_validation_samples = raw_datasets["train"].num_rows * args.validation_split_percentage // 100
if num_validation_samples == 0:
raise ValueError(
"`args.validation_split_percentage` is less than a single sample "
f"for {len(raw_datasets['train'])} training samples. Increase "
"`args.num_validation_split_percentage`. "
)
raw_datasets["validation"] = raw_datasets["train"].select(range(num_validation_samples))
raw_datasets["train"] = raw_datasets["train"].select(range(num_validation_samples, raw_datasets["train"].num_rows))
# 2. Now we preprocess the datasets including loading the audio, resampling and normalization
# Thankfully, `datasets` takes care of automatically loading and resampling the audio,
# so that we just need to set the correct target sampling rate and normalize the input
# via the `feature_extractor`
feature_extractor = Wav2Vec2FeatureExtractor.from_pretrained(args.model_name_or_path)
# make sure that dataset decodes audio with correct sampling rate
raw_datasets = raw_datasets.cast_column(
args.audio_column_name, datasets.features.Audio(sampling_rate=feature_extractor.sampling_rate)
)
# only normalized-inputs-training is supported
if not feature_extractor.do_normalize:
raise ValueError(
"Training is only supported for normalized inputs. " "Make sure ``feature_extractor.do_normalize == True``"
)
# set max & min audio length in number of samples
max_length = int(args.max_duration_in_seconds * feature_extractor.sampling_rate)
min_length = int(args.min_duration_in_seconds * feature_extractor.sampling_rate)
def prepare_dataset(batch):
sample = batch[args.audio_column_name]
inputs = feature_extractor(
sample["array"], sampling_rate=sample["sampling_rate"], max_length=max_length, truncation=True
)
batch["input_values"] = inputs.input_values[0]
batch["input_length"] = len(inputs.input_values[0])
return batch
# load via mapped files via path
cache_file_names = None
if args.train_cache_file_name is not None:
cache_file_names = {"train": args.train_cache_file_name, "validation": args.validation_cache_file_name}
# load audio files into numpy arrays
with accelerator.main_process_first():
vectorized_datasets = raw_datasets.map(
prepare_dataset,
num_proc=args.preprocessing_num_workers,
remove_columns=raw_datasets["train"].column_names,
cache_file_names=cache_file_names,
)
if min_length > 0.0:
vectorized_datasets = vectorized_datasets.filter(
lambda x: x > min_length,
num_proc=args.preprocessing_num_workers,
input_columns=["input_length"],
)
vectorized_datasets = vectorized_datasets.remove_columns("input_length")
# for large datasets it is advised to run the preprocessing on a
# single machine first with ``args.preprocessing_only`` since there will mostly likely
# be a timeout when running the script in distributed mode.
# In a second step ``args.preprocessing_only`` can then be set to `False` to load the
# cached dataset
if args.preprocessing_only:
return
# 3. Load model
config = Wav2Vec2Config.from_pretrained(args.model_name_or_path)
# pretraining is only supported for "newer" stable layer norm architecture
# apply_spec_augment has to be True, mask_feature_prob has to be 0.0
if not config.do_stable_layer_norm or config.feat_extract_norm != "layer":
raise ValueError(
"PreTraining is only supported for ``config.do_stable_layer_norm=True`` and ``config.feat_extract_norm='layer'"
)
# initialize random model
model = Wav2Vec2ForPreTraining(config)
# Activate gradient checkpointing if needed
if args.gradient_checkpointing:
model.gradient_checkpointing_enable()
# 4. Define data collator, optimizer and scheduler
data_collator = DataCollatorForWav2Vec2Pretraining(
model=model, feature_extractor=feature_extractor, pad_to_multiple_of=args.pad_to_multiple_of
)
train_dataloader = DataLoader(
vectorized_datasets["train"],
shuffle=True,
collate_fn=data_collator,
batch_size=args.per_device_train_batch_size,
)
eval_dataloader = DataLoader(
vectorized_datasets["validation"], collate_fn=data_collator, batch_size=args.per_device_eval_batch_size
)
# Optimizer
optimizer = AdamW(
list(model.parameters()),
lr=args.learning_rate,
betas=[args.adam_beta1, args.adam_beta2],
eps=args.adam_epsilon,
)
# Prepare everything with our `accelerator`.
model, optimizer, train_dataloader, eval_dataloader = accelerator.prepare(
model, optimizer, train_dataloader, eval_dataloader
)
# Scheduler and math around the number of training steps.
num_update_steps_per_epoch = math.ceil(len(train_dataloader) / args.gradient_accumulation_steps)
if args.max_train_steps is None:
args.max_train_steps = args.num_train_epochs * num_update_steps_per_epoch
else:
args.num_train_epochs = math.ceil(args.max_train_steps / num_update_steps_per_epoch)
lr_scheduler = get_scheduler(
name=args.lr_scheduler_type,
optimizer=optimizer,
num_warmup_steps=args.num_warmup_steps,
num_training_steps=args.max_train_steps,
)
# 5. Train
total_batch_size = args.per_device_train_batch_size * accelerator.num_processes * args.gradient_accumulation_steps
logger.info("***** Running training *****")
logger.info(f" Num examples = {len(vectorized_datasets['train'])}")
logger.info(f" Num Epochs = {args.num_train_epochs}")
logger.info(f" Instantaneous batch size per device = {args.per_device_train_batch_size}")
logger.info(f" Total train batch size (w. parallel, distributed & accumulation) = {total_batch_size}")
logger.info(f" Gradient Accumulation steps = {args.gradient_accumulation_steps}")
logger.info(f" Total optimization steps = {args.max_train_steps}")
completed_steps = 0
# Only show the progress bar once on each machine.
progress_bar = tqdm(range(args.max_train_steps), disable=not accelerator.is_local_main_process)
completed_steps = 0
for epoch in range(args.num_train_epochs):
model.train()
for step, batch in enumerate(train_dataloader):
# compute num of losses
num_losses = batch["mask_time_indices"].sum()
sub_attention_mask = batch.pop("sub_attention_mask", None)
sub_attention_mask = (
sub_attention_mask if sub_attention_mask is not None else torch.ones_like(batch["mask_time_indices"])
)
percent_masked = num_losses / sub_attention_mask.sum()
# forward
outputs = model(**batch)
# divide loss by gradient accumulation steps since gradients
# are accumulated for multiple backward passes in PyTorch
loss = outputs.loss / args.gradient_accumulation_steps
accelerator.backward(loss)
# make sure that `num_losses` is summed for distributed training
# and average gradients over losses of all devices
if accelerator.state.num_processes > 1:
num_losses = accelerator.gather(num_losses).sum()
gradient_multiplier = accelerator.state.num_processes / num_losses
multiply_grads(model.module.parameters(), gradient_multiplier)
else:
multiply_grads(model.parameters(), 1 / num_losses)
# update step
if (step + 1) % args.gradient_accumulation_steps == 0 or step == len(train_dataloader) - 1:
# compute grad norm for monitoring
scale = (
accelerator.scaler._scale.item()
if hasattr(accelerator, "scaler") and accelerator.scaler is not None
else 1
)
if accelerator.state.num_processes > 1:
grad_norm = get_grad_norm(model.module.parameters(), scale)
else:
grad_norm = get_grad_norm(model.parameters(), scale)
# update parameters
optimizer.step()
optimizer.zero_grad()
if not accelerator.optimizer_step_was_skipped:
lr_scheduler.step()
elif accelerator.is_local_main_process:
progress_bar.write(
"Gradients have overflown - skipping update step... " f"Updating gradient scale to {scale}..."
)
# update gumbel temperature
gumbel_temperature = max(
args.max_gumbel_temperature * args.gumbel_temperature_decay**completed_steps,
args.min_gumbel_temperature,
)
if hasattr(model, "module"):
model.module.set_gumbel_temperature(gumbel_temperature)
else:
model.set_gumbel_temperature(gumbel_temperature)
progress_bar.update(1)
completed_steps += 1
# 6. Log all results
if (step + 1) % (args.gradient_accumulation_steps * args.logging_steps) == 0:
loss.detach()
outputs.contrastive_loss.detach()
outputs.diversity_loss.detach()
if accelerator.state.num_processes > 1:
loss = accelerator.gather(loss).sum()
outputs.contrastive_loss = accelerator.gather(outputs.contrastive_loss).sum()
outputs.diversity_loss = accelerator.gather(outputs.diversity_loss).sum()
percent_masked = accelerator.gather(percent_masked).sum()
train_logs = {
"loss": (loss * args.gradient_accumulation_steps) / num_losses,
"constrast_loss": outputs.contrastive_loss / num_losses,
"div_loss": outputs.diversity_loss / num_losses,
"%_mask_idx": percent_masked / accelerator.num_processes,
"ppl": outputs.codevector_perplexity,
"lr": torch.tensor(optimizer.param_groups[0]["lr"]),
"temp": torch.tensor(gumbel_temperature),
"grad_norm": torch.tensor(grad_norm),
}
log_str = ""
for k, v in train_logs.items():
log_str += "| {}: {:.3e}".format(k, v.item())
if accelerator.is_local_main_process:
progress_bar.write(log_str)
if is_wandb_available():
wandb.log(train_logs)
# save model every `args.saving_steps` steps
if (step + 1) % (args.gradient_accumulation_steps * args.saving_steps) == 0:
if (args.push_to_hub and epoch < args.num_train_epochs - 1) or args.output_dir is not None:
accelerator.wait_for_everyone()
unwrapped_model = accelerator.unwrap_model(model)
unwrapped_model.save_pretrained(args.output_dir, save_function=accelerator.save)
if (args.push_to_hub and epoch < args.num_train_epochs - 1) and accelerator.is_main_process:
repo.push_to_hub(
commit_message=f"Training in progress step {completed_steps}",
blocking=False,
auto_lfs_prune=True,
)
# if completed steps > `args.max_train_steps` stop
if completed_steps >= args.max_train_steps:
break
# 7. Validate!
model.eval()
# init logs
val_logs = {
"val_loss": 0,
"val_contrastive_loss": 0,
"val_diversity_loss": 0,
"val_num_losses": 0,
}
for step, batch in enumerate(eval_dataloader):
with torch.no_grad():
batch.pop("sub_attention_mask", None)
outputs = model(**batch)
val_logs["val_loss"] += outputs.loss
val_logs["val_contrastive_loss"] += outputs.contrastive_loss
val_logs["val_diversity_loss"] += outputs.diversity_loss
val_logs["val_num_losses"] += batch["mask_time_indices"].sum()
# sum over devices in multi-processing
if accelerator.num_processes > 1:
val_logs = {k: accelerator.gather(v).sum() for k, v in val_logs.items()}
val_logs = {k: v / val_logs["val_num_losses"] for k, v in val_logs.items()}
log_str = ""
for k, v in val_logs.items():
log_str += "| {}: {:.3e}".format(k, v.item())
if accelerator.is_local_main_process:
progress_bar.write(log_str)
if is_wandb_available():
wandb.log(val_logs)
if args.output_dir is not None:
accelerator.wait_for_everyone()
unwrapped_model = accelerator.unwrap_model(model)
unwrapped_model.save_pretrained(args.output_dir, save_function=accelerator.save)
if accelerator.is_main_process:
if args.push_to_hub:
repo.push_to_hub(commit_message="End of training", auto_lfs_prune=True)
if __name__ == "__main__":
main()
| 29,371 | 39.346154 | 200 | py |
robust-transformers | robust-transformers-main/examples/pytorch/text-generation/run_generation.py | #!/usr/bin/env python
# coding=utf-8
# Copyright 2018 Google AI, Google Brain and Carnegie Mellon University Authors and the HuggingFace Inc. team.
# Copyright (c) 2018, NVIDIA CORPORATION. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
""" Conditional text generation with the auto-regressive models of the library (GPT/GPT-2/CTRL/Transformer-XL/XLNet)
"""
import argparse
import logging
import numpy as np
import torch
from transformers import (
CTRLLMHeadModel,
CTRLTokenizer,
GPT2LMHeadModel,
GPT2Tokenizer,
OpenAIGPTLMHeadModel,
OpenAIGPTTokenizer,
TransfoXLLMHeadModel,
TransfoXLTokenizer,
XLMTokenizer,
XLMWithLMHeadModel,
XLNetLMHeadModel,
XLNetTokenizer,
)
logging.basicConfig(
format="%(asctime)s - %(levelname)s - %(name)s - %(message)s",
datefmt="%m/%d/%Y %H:%M:%S",
level=logging.INFO,
)
logger = logging.getLogger(__name__)
MAX_LENGTH = int(10000) # Hardcoded max length to avoid infinite loop
MODEL_CLASSES = {
"gpt2": (GPT2LMHeadModel, GPT2Tokenizer),
"ctrl": (CTRLLMHeadModel, CTRLTokenizer),
"openai-gpt": (OpenAIGPTLMHeadModel, OpenAIGPTTokenizer),
"xlnet": (XLNetLMHeadModel, XLNetTokenizer),
"transfo-xl": (TransfoXLLMHeadModel, TransfoXLTokenizer),
"xlm": (XLMWithLMHeadModel, XLMTokenizer),
}
# Padding text to help Transformer-XL and XLNet with short prompts as proposed by Aman Rusia
# in https://github.com/rusiaaman/XLNet-gen#methodology
# and https://medium.com/@amanrusia/xlnet-speaks-comparison-to-gpt-2-ea1a4e9ba39e
PREFIX = """In 1991, the remains of Russian Tsar Nicholas II and his family
(except for Alexei and Maria) are discovered.
The voice of Nicholas's young son, Tsarevich Alexei Nikolaevich, narrates the
remainder of the story. 1883 Western Siberia,
a young Grigori Rasputin is asked by his father and a group of men to perform magic.
Rasputin has a vision and denounces one of the men as a horse thief. Although his
father initially slaps him for making such an accusation, Rasputin watches as the
man is chased outside and beaten. Twenty years later, Rasputin sees a vision of
the Virgin Mary, prompting him to become a priest. Rasputin quickly becomes famous,
with people, even a bishop, begging for his blessing. <eod> </s> <eos>"""
def set_seed(args):
np.random.seed(args.seed)
torch.manual_seed(args.seed)
if args.n_gpu > 0:
torch.cuda.manual_seed_all(args.seed)
#
# Functions to prepare models' input
#
def prepare_ctrl_input(args, _, tokenizer, prompt_text):
if args.temperature > 0.7:
logger.info("CTRL typically works better with lower temperatures (and lower top_k).")
encoded_prompt = tokenizer.encode(prompt_text, add_special_tokens=False)
if not any(encoded_prompt[0] == x for x in tokenizer.control_codes.values()):
logger.info("WARNING! You are not starting your generation from a control code so you won't get good results")
return prompt_text
def prepare_xlm_input(args, model, tokenizer, prompt_text):
# kwargs = {"language": None, "mask_token_id": None}
# Set the language
use_lang_emb = hasattr(model.config, "use_lang_emb") and model.config.use_lang_emb
if hasattr(model.config, "lang2id") and use_lang_emb:
available_languages = model.config.lang2id.keys()
if args.xlm_language in available_languages:
language = args.xlm_language
else:
language = None
while language not in available_languages:
language = input("Using XLM. Select language in " + str(list(available_languages)) + " >>> ")
model.config.lang_id = model.config.lang2id[language]
# kwargs["language"] = tokenizer.lang2id[language]
# TODO fix mask_token_id setup when configurations will be synchronized between models and tokenizers
# XLM masked-language modeling (MLM) models need masked token
# is_xlm_mlm = "mlm" in args.model_name_or_path
# if is_xlm_mlm:
# kwargs["mask_token_id"] = tokenizer.mask_token_id
return prompt_text
def prepare_xlnet_input(args, _, tokenizer, prompt_text):
prefix = args.prefix if args.prefix else args.padding_text if args.padding_text else PREFIX
prompt_text = prefix + prompt_text
return prompt_text
def prepare_transfoxl_input(args, _, tokenizer, prompt_text):
prefix = args.prefix if args.prefix else args.padding_text if args.padding_text else PREFIX
prompt_text = prefix + prompt_text
return prompt_text
PREPROCESSING_FUNCTIONS = {
"ctrl": prepare_ctrl_input,
"xlm": prepare_xlm_input,
"xlnet": prepare_xlnet_input,
"transfo-xl": prepare_transfoxl_input,
}
def adjust_length_to_model(length, max_sequence_length):
if length < 0 and max_sequence_length > 0:
length = max_sequence_length
elif 0 < max_sequence_length < length:
length = max_sequence_length # No generation bigger than model size
elif length < 0:
length = MAX_LENGTH # avoid infinite loop
return length
def main():
parser = argparse.ArgumentParser()
parser.add_argument(
"--model_type",
default=None,
type=str,
required=True,
help="Model type selected in the list: " + ", ".join(MODEL_CLASSES.keys()),
)
parser.add_argument(
"--model_name_or_path",
default=None,
type=str,
required=True,
help="Path to pre-trained model or shortcut name selected in the list: " + ", ".join(MODEL_CLASSES.keys()),
)
parser.add_argument("--prompt", type=str, default="")
parser.add_argument("--length", type=int, default=20)
parser.add_argument("--stop_token", type=str, default=None, help="Token at which text generation is stopped")
parser.add_argument(
"--temperature",
type=float,
default=1.0,
help="temperature of 1.0 has no effect, lower tend toward greedy sampling",
)
parser.add_argument(
"--repetition_penalty", type=float, default=1.0, help="primarily useful for CTRL model; in that case, use 1.2"
)
parser.add_argument("--k", type=int, default=0)
parser.add_argument("--p", type=float, default=0.9)
parser.add_argument("--prefix", type=str, default="", help="Text added prior to input.")
parser.add_argument("--padding_text", type=str, default="", help="Deprecated, the use of `--prefix` is preferred.")
parser.add_argument("--xlm_language", type=str, default="", help="Optional language when used with the XLM model.")
parser.add_argument("--seed", type=int, default=42, help="random seed for initialization")
parser.add_argument("--no_cuda", action="store_true", help="Avoid using CUDA when available")
parser.add_argument("--num_return_sequences", type=int, default=1, help="The number of samples to generate.")
parser.add_argument(
"--fp16",
action="store_true",
help="Whether to use 16-bit (mixed) precision (through NVIDIA apex) instead of 32-bit",
)
args = parser.parse_args()
args.device = torch.device("cuda" if torch.cuda.is_available() and not args.no_cuda else "cpu")
args.n_gpu = 0 if args.no_cuda else torch.cuda.device_count()
logger.warning(f"device: {args.device}, n_gpu: {args.n_gpu}, 16-bits training: {args.fp16}")
set_seed(args)
# Initialize the model and tokenizer
try:
args.model_type = args.model_type.lower()
model_class, tokenizer_class = MODEL_CLASSES[args.model_type]
except KeyError:
raise KeyError("the model {} you specified is not supported. You are welcome to add it and open a PR :)")
tokenizer = tokenizer_class.from_pretrained(args.model_name_or_path)
model = model_class.from_pretrained(args.model_name_or_path)
model.to(args.device)
if args.fp16:
model.half()
args.length = adjust_length_to_model(args.length, max_sequence_length=model.config.max_position_embeddings)
logger.info(args)
prompt_text = args.prompt if args.prompt else input("Model prompt >>> ")
# Different models need different input formatting and/or extra arguments
requires_preprocessing = args.model_type in PREPROCESSING_FUNCTIONS.keys()
if requires_preprocessing:
prepare_input = PREPROCESSING_FUNCTIONS.get(args.model_type)
preprocessed_prompt_text = prepare_input(args, model, tokenizer, prompt_text)
if model.__class__.__name__ in ["TransfoXLLMHeadModel"]:
tokenizer_kwargs = {"add_space_before_punct_symbol": True}
else:
tokenizer_kwargs = {}
encoded_prompt = tokenizer.encode(
preprocessed_prompt_text, add_special_tokens=False, return_tensors="pt", **tokenizer_kwargs
)
else:
prefix = args.prefix if args.prefix else args.padding_text
encoded_prompt = tokenizer.encode(prefix + prompt_text, add_special_tokens=False, return_tensors="pt")
encoded_prompt = encoded_prompt.to(args.device)
if encoded_prompt.size()[-1] == 0:
input_ids = None
else:
input_ids = encoded_prompt
output_sequences = model.generate(
input_ids=input_ids,
max_length=args.length + len(encoded_prompt[0]),
temperature=args.temperature,
top_k=args.k,
top_p=args.p,
repetition_penalty=args.repetition_penalty,
do_sample=True,
num_return_sequences=args.num_return_sequences,
)
# Remove the batch dimension when returning multiple sequences
if len(output_sequences.shape) > 2:
output_sequences.squeeze_()
generated_sequences = []
for generated_sequence_idx, generated_sequence in enumerate(output_sequences):
print(f"=== GENERATED SEQUENCE {generated_sequence_idx + 1} ===")
generated_sequence = generated_sequence.tolist()
# Decode text
text = tokenizer.decode(generated_sequence, clean_up_tokenization_spaces=True)
# Remove all text after the stop token
text = text[: text.find(args.stop_token) if args.stop_token else None]
# Add the prompt at the beginning of the sequence. Remove the excess text that was used for pre-processing
total_sequence = (
prompt_text + text[len(tokenizer.decode(encoded_prompt[0], clean_up_tokenization_spaces=True)) :]
)
generated_sequences.append(total_sequence)
print(total_sequence)
return generated_sequences
if __name__ == "__main__":
main()
| 10,991 | 36.773196 | 119 | py |
robust-transformers | robust-transformers-main/examples/pytorch/multiple-choice/run_swag.py | #!/usr/bin/env python
# coding=utf-8
# Copyright The HuggingFace Team and The HuggingFace Inc. team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
"""
Fine-tuning the library models for multiple choice.
"""
# You can also adapt this script on your own multiple choice task. Pointers for this are left as comments.
import logging
import os
import sys
from dataclasses import dataclass, field
from itertools import chain
from typing import Optional, Union
import datasets
import numpy as np
import torch
from datasets import load_dataset
import transformers
from transformers import (
AutoConfig,
AutoModelForMultipleChoice,
AutoTokenizer,
HfArgumentParser,
Trainer,
TrainingArguments,
default_data_collator,
set_seed,
)
from transformers.file_utils import PaddingStrategy
from transformers.tokenization_utils_base import PreTrainedTokenizerBase
from transformers.trainer_utils import get_last_checkpoint
from transformers.utils import check_min_version
# Will error if the minimal version of Transformers is not installed. Remove at your own risks.
check_min_version("4.18.0.dev0")
logger = logging.getLogger(__name__)
@dataclass
class ModelArguments:
"""
Arguments pertaining to which model/config/tokenizer we are going to fine-tune from.
"""
model_name_or_path: str = field(
metadata={"help": "Path to pretrained model or model identifier from huggingface.co/models"}
)
config_name: Optional[str] = field(
default=None, metadata={"help": "Pretrained config name or path if not the same as model_name"}
)
tokenizer_name: Optional[str] = field(
default=None, metadata={"help": "Pretrained tokenizer name or path if not the same as model_name"}
)
cache_dir: Optional[str] = field(
default=None,
metadata={"help": "Where do you want to store the pretrained models downloaded from huggingface.co"},
)
use_fast_tokenizer: bool = field(
default=True,
metadata={"help": "Whether to use one of the fast tokenizer (backed by the tokenizers library) or not."},
)
model_revision: str = field(
default="main",
metadata={"help": "The specific model version to use (can be a branch name, tag name or commit id)."},
)
use_auth_token: bool = field(
default=False,
metadata={
"help": "Will use the token generated when running `transformers-cli login` (necessary to use this script "
"with private models)."
},
)
@dataclass
class DataTrainingArguments:
"""
Arguments pertaining to what data we are going to input our model for training and eval.
"""
train_file: Optional[str] = field(default=None, metadata={"help": "The input training data file (a text file)."})
validation_file: Optional[str] = field(
default=None,
metadata={"help": "An optional input evaluation data file to evaluate the perplexity on (a text file)."},
)
overwrite_cache: bool = field(
default=False, metadata={"help": "Overwrite the cached training and evaluation sets"}
)
preprocessing_num_workers: Optional[int] = field(
default=None,
metadata={"help": "The number of processes to use for the preprocessing."},
)
max_seq_length: Optional[int] = field(
default=None,
metadata={
"help": "The maximum total input sequence length after tokenization. If passed, sequences longer "
"than this will be truncated, sequences shorter will be padded."
},
)
pad_to_max_length: bool = field(
default=False,
metadata={
"help": "Whether to pad all samples to the maximum sentence length. "
"If False, will pad the samples dynamically when batching to the maximum length in the batch. More "
"efficient on GPU but very bad for TPU."
},
)
max_train_samples: Optional[int] = field(
default=None,
metadata={
"help": "For debugging purposes or quicker training, truncate the number of training examples to this "
"value if set."
},
)
max_eval_samples: Optional[int] = field(
default=None,
metadata={
"help": "For debugging purposes or quicker training, truncate the number of evaluation examples to this "
"value if set."
},
)
def __post_init__(self):
if self.train_file is not None:
extension = self.train_file.split(".")[-1]
assert extension in ["csv", "json"], "`train_file` should be a csv or a json file."
if self.validation_file is not None:
extension = self.validation_file.split(".")[-1]
assert extension in ["csv", "json"], "`validation_file` should be a csv or a json file."
@dataclass
class DataCollatorForMultipleChoice:
"""
Data collator that will dynamically pad the inputs for multiple choice received.
Args:
tokenizer ([`PreTrainedTokenizer`] or [`PreTrainedTokenizerFast`]):
The tokenizer used for encoding the data.
padding (`bool`, `str` or [`~file_utils.PaddingStrategy`], *optional*, defaults to `True`):
Select a strategy to pad the returned sequences (according to the model's padding side and padding index)
among:
- `True` or `'longest'`: Pad to the longest sequence in the batch (or no padding if only a single sequence
if provided).
- `'max_length'`: Pad to a maximum length specified with the argument `max_length` or to the maximum
acceptable input length for the model if that argument is not provided.
- `False` or `'do_not_pad'` (default): No padding (i.e., can output a batch with sequences of different
lengths).
max_length (`int`, *optional*):
Maximum length of the returned list and optionally padding length (see above).
pad_to_multiple_of (`int`, *optional*):
If set will pad the sequence to a multiple of the provided value.
This is especially useful to enable the use of Tensor Cores on NVIDIA hardware with compute capability >=
7.5 (Volta).
"""
tokenizer: PreTrainedTokenizerBase
padding: Union[bool, str, PaddingStrategy] = True
max_length: Optional[int] = None
pad_to_multiple_of: Optional[int] = None
def __call__(self, features):
label_name = "label" if "label" in features[0].keys() else "labels"
labels = [feature.pop(label_name) for feature in features]
batch_size = len(features)
num_choices = len(features[0]["input_ids"])
flattened_features = [
[{k: v[i] for k, v in feature.items()} for i in range(num_choices)] for feature in features
]
flattened_features = list(chain(*flattened_features))
batch = self.tokenizer.pad(
flattened_features,
padding=self.padding,
max_length=self.max_length,
pad_to_multiple_of=self.pad_to_multiple_of,
return_tensors="pt",
)
# Un-flatten
batch = {k: v.view(batch_size, num_choices, -1) for k, v in batch.items()}
# Add back labels
batch["labels"] = torch.tensor(labels, dtype=torch.int64)
return batch
def main():
# See all possible arguments in src/transformers/training_args.py
# or by passing the --help flag to this script.
# We now keep distinct sets of args, for a cleaner separation of concerns.
parser = HfArgumentParser((ModelArguments, DataTrainingArguments, TrainingArguments))
if len(sys.argv) == 2 and sys.argv[1].endswith(".json"):
# If we pass only one argument to the script and it's the path to a json file,
# let's parse it to get our arguments.
model_args, data_args, training_args = parser.parse_json_file(json_file=os.path.abspath(sys.argv[1]))
else:
model_args, data_args, training_args = parser.parse_args_into_dataclasses()
# Setup logging
logging.basicConfig(
format="%(asctime)s - %(levelname)s - %(name)s - %(message)s",
datefmt="%m/%d/%Y %H:%M:%S",
handlers=[logging.StreamHandler(sys.stdout)],
)
log_level = training_args.get_process_log_level()
logger.setLevel(log_level)
datasets.utils.logging.set_verbosity(log_level)
transformers.utils.logging.set_verbosity(log_level)
transformers.utils.logging.enable_default_handler()
transformers.utils.logging.enable_explicit_format()
# Log on each process the small summary:
logger.warning(
f"Process rank: {training_args.local_rank}, device: {training_args.device}, n_gpu: {training_args.n_gpu}"
+ f"distributed training: {bool(training_args.local_rank != -1)}, 16-bits training: {training_args.fp16}"
)
logger.info(f"Training/evaluation parameters {training_args}")
# Detecting last checkpoint.
last_checkpoint = None
if os.path.isdir(training_args.output_dir) and training_args.do_train and not training_args.overwrite_output_dir:
last_checkpoint = get_last_checkpoint(training_args.output_dir)
if last_checkpoint is None and len(os.listdir(training_args.output_dir)) > 0:
raise ValueError(
f"Output directory ({training_args.output_dir}) already exists and is not empty. "
"Use --overwrite_output_dir to overcome."
)
elif last_checkpoint is not None and training_args.resume_from_checkpoint is None:
logger.info(
f"Checkpoint detected, resuming training at {last_checkpoint}. To avoid this behavior, change "
"the `--output_dir` or add `--overwrite_output_dir` to train from scratch."
)
# Set seed before initializing model.
set_seed(training_args.seed)
# Get the datasets: you can either provide your own CSV/JSON/TXT training and evaluation files (see below)
# or just provide the name of one of the public datasets available on the hub at https://huggingface.co/datasets/
# (the dataset will be downloaded automatically from the datasets Hub).
# For CSV/JSON files, this script will use the column called 'text' or the first column if no column called
# 'text' is found. You can easily tweak this behavior (see below).
# In distributed training, the load_dataset function guarantee that only one local process can concurrently
# download the dataset.
if data_args.train_file is not None or data_args.validation_file is not None:
data_files = {}
if data_args.train_file is not None:
data_files["train"] = data_args.train_file
if data_args.validation_file is not None:
data_files["validation"] = data_args.validation_file
extension = data_args.train_file.split(".")[-1]
raw_datasets = load_dataset(extension, data_files=data_files, cache_dir=model_args.cache_dir)
else:
# Downloading and loading the swag dataset from the hub.
raw_datasets = load_dataset("swag", "regular", cache_dir=model_args.cache_dir)
# See more about loading any type of standard or custom dataset (from files, python dict, pandas DataFrame, etc) at
# https://huggingface.co/docs/datasets/loading_datasets.html.
# Load pretrained model and tokenizer
# Distributed training:
# The .from_pretrained methods guarantee that only one local process can concurrently
# download model & vocab.
config = AutoConfig.from_pretrained(
model_args.config_name if model_args.config_name else model_args.model_name_or_path,
cache_dir=model_args.cache_dir,
revision=model_args.model_revision,
use_auth_token=True if model_args.use_auth_token else None,
)
tokenizer = AutoTokenizer.from_pretrained(
model_args.tokenizer_name if model_args.tokenizer_name else model_args.model_name_or_path,
cache_dir=model_args.cache_dir,
use_fast=model_args.use_fast_tokenizer,
revision=model_args.model_revision,
use_auth_token=True if model_args.use_auth_token else None,
)
model = AutoModelForMultipleChoice.from_pretrained(
model_args.model_name_or_path,
from_tf=bool(".ckpt" in model_args.model_name_or_path),
config=config,
cache_dir=model_args.cache_dir,
revision=model_args.model_revision,
use_auth_token=True if model_args.use_auth_token else None,
)
# When using your own dataset or a different dataset from swag, you will probably need to change this.
ending_names = [f"ending{i}" for i in range(4)]
context_name = "sent1"
question_header_name = "sent2"
if data_args.max_seq_length is None:
max_seq_length = tokenizer.model_max_length
if max_seq_length > 1024:
logger.warning(
f"The tokenizer picked seems to have a very large `model_max_length` ({tokenizer.model_max_length}). "
"Picking 1024 instead. You can change that default value by passing --max_seq_length xxx."
)
max_seq_length = 1024
else:
if data_args.max_seq_length > tokenizer.model_max_length:
logger.warning(
f"The max_seq_length passed ({data_args.max_seq_length}) is larger than the maximum length for the"
f"model ({tokenizer.model_max_length}). Using max_seq_length={tokenizer.model_max_length}."
)
max_seq_length = min(data_args.max_seq_length, tokenizer.model_max_length)
# Preprocessing the datasets.
def preprocess_function(examples):
first_sentences = [[context] * 4 for context in examples[context_name]]
question_headers = examples[question_header_name]
second_sentences = [
[f"{header} {examples[end][i]}" for end in ending_names] for i, header in enumerate(question_headers)
]
# Flatten out
first_sentences = list(chain(*first_sentences))
second_sentences = list(chain(*second_sentences))
# Tokenize
tokenized_examples = tokenizer(
first_sentences,
second_sentences,
truncation=True,
max_length=max_seq_length,
padding="max_length" if data_args.pad_to_max_length else False,
)
# Un-flatten
return {k: [v[i : i + 4] for i in range(0, len(v), 4)] for k, v in tokenized_examples.items()}
if training_args.do_train:
if "train" not in raw_datasets:
raise ValueError("--do_train requires a train dataset")
train_dataset = raw_datasets["train"]
if data_args.max_train_samples is not None:
train_dataset = train_dataset.select(range(data_args.max_train_samples))
with training_args.main_process_first(desc="train dataset map pre-processing"):
train_dataset = train_dataset.map(
preprocess_function,
batched=True,
num_proc=data_args.preprocessing_num_workers,
load_from_cache_file=not data_args.overwrite_cache,
)
if training_args.do_eval:
if "validation" not in raw_datasets:
raise ValueError("--do_eval requires a validation dataset")
eval_dataset = raw_datasets["validation"]
if data_args.max_eval_samples is not None:
eval_dataset = eval_dataset.select(range(data_args.max_eval_samples))
with training_args.main_process_first(desc="validation dataset map pre-processing"):
eval_dataset = eval_dataset.map(
preprocess_function,
batched=True,
num_proc=data_args.preprocessing_num_workers,
load_from_cache_file=not data_args.overwrite_cache,
)
# Data collator
data_collator = (
default_data_collator
if data_args.pad_to_max_length
else DataCollatorForMultipleChoice(tokenizer=tokenizer, pad_to_multiple_of=8 if training_args.fp16 else None)
)
# Metric
def compute_metrics(eval_predictions):
predictions, label_ids = eval_predictions
preds = np.argmax(predictions, axis=1)
return {"accuracy": (preds == label_ids).astype(np.float32).mean().item()}
# Initialize our Trainer
trainer = Trainer(
model=model,
args=training_args,
train_dataset=train_dataset if training_args.do_train else None,
eval_dataset=eval_dataset if training_args.do_eval else None,
tokenizer=tokenizer,
data_collator=data_collator,
compute_metrics=compute_metrics,
)
# Training
if training_args.do_train:
checkpoint = None
if training_args.resume_from_checkpoint is not None:
checkpoint = training_args.resume_from_checkpoint
elif last_checkpoint is not None:
checkpoint = last_checkpoint
train_result = trainer.train(resume_from_checkpoint=checkpoint)
trainer.save_model() # Saves the tokenizer too for easy upload
metrics = train_result.metrics
max_train_samples = (
data_args.max_train_samples if data_args.max_train_samples is not None else len(train_dataset)
)
metrics["train_samples"] = min(max_train_samples, len(train_dataset))
trainer.log_metrics("train", metrics)
trainer.save_metrics("train", metrics)
trainer.save_state()
# Evaluation
if training_args.do_eval:
logger.info("*** Evaluate ***")
metrics = trainer.evaluate()
max_eval_samples = data_args.max_eval_samples if data_args.max_eval_samples is not None else len(eval_dataset)
metrics["eval_samples"] = min(max_eval_samples, len(eval_dataset))
trainer.log_metrics("eval", metrics)
trainer.save_metrics("eval", metrics)
kwargs = dict(
finetuned_from=model_args.model_name_or_path,
tasks="multiple-choice",
dataset_tags="swag",
dataset_args="regular",
dataset="SWAG",
language="en",
)
if training_args.push_to_hub:
trainer.push_to_hub(**kwargs)
else:
trainer.create_model_card(**kwargs)
def _mp_fn(index):
# For xla_spawn (TPUs)
main()
if __name__ == "__main__":
main()
| 18,885 | 40.416667 | 119 | py |
robust-transformers | robust-transformers-main/examples/pytorch/multiple-choice/run_swag_no_trainer.py | #!/usr/bin/env python
# coding=utf-8
# Copyright The HuggingFace Team and The HuggingFace Inc. team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
"""
Fine-tuning a 🤗 Transformers model on multiple choice relying on the accelerate library without using a Trainer.
"""
# You can also adapt this script on your own multiple choice task. Pointers for this are left as comments.
import argparse
import logging
import math
import os
import random
from dataclasses import dataclass
from itertools import chain
from pathlib import Path
from typing import Optional, Union
import datasets
import torch
from datasets import load_dataset, load_metric
from torch.utils.data import DataLoader
from tqdm.auto import tqdm
import transformers
from accelerate import Accelerator
from huggingface_hub import Repository
from transformers import (
CONFIG_MAPPING,
MODEL_MAPPING,
AdamW,
AutoConfig,
AutoModelForMultipleChoice,
AutoTokenizer,
PreTrainedTokenizerBase,
SchedulerType,
default_data_collator,
get_scheduler,
set_seed,
)
from transformers.file_utils import PaddingStrategy, get_full_repo_name
logger = logging.getLogger(__name__)
# You should update this to your particular problem to have better documentation of `model_type`
MODEL_CONFIG_CLASSES = list(MODEL_MAPPING.keys())
MODEL_TYPES = tuple(conf.model_type for conf in MODEL_CONFIG_CLASSES)
def parse_args():
parser = argparse.ArgumentParser(description="Finetune a transformers model on a text classification task")
parser.add_argument(
"--dataset_name",
type=str,
default=None,
help="The name of the dataset to use (via the datasets library).",
)
parser.add_argument(
"--dataset_config_name",
type=str,
default=None,
help="The configuration name of the dataset to use (via the datasets library).",
)
parser.add_argument(
"--train_file", type=str, default=None, help="A csv or a json file containing the training data."
)
parser.add_argument(
"--validation_file", type=str, default=None, help="A csv or a json file containing the validation data."
)
parser.add_argument(
"--max_length",
type=int,
default=128,
help=(
"The maximum total input sequence length after tokenization. Sequences longer than this will be truncated,"
" sequences shorter will be padded if `--pad_to_max_lengh` is passed."
),
)
parser.add_argument(
"--pad_to_max_length",
action="store_true",
help="If passed, pad all samples to `max_length`. Otherwise, dynamic padding is used.",
)
parser.add_argument(
"--model_name_or_path",
type=str,
help="Path to pretrained model or model identifier from huggingface.co/models.",
required=True,
)
parser.add_argument(
"--config_name",
type=str,
default=None,
help="Pretrained config name or path if not the same as model_name",
)
parser.add_argument(
"--tokenizer_name",
type=str,
default=None,
help="Pretrained tokenizer name or path if not the same as model_name",
)
parser.add_argument(
"--use_slow_tokenizer",
action="store_true",
help="If passed, will use a slow tokenizer (not backed by the 🤗 Tokenizers library).",
)
parser.add_argument(
"--per_device_train_batch_size",
type=int,
default=8,
help="Batch size (per device) for the training dataloader.",
)
parser.add_argument(
"--per_device_eval_batch_size",
type=int,
default=8,
help="Batch size (per device) for the evaluation dataloader.",
)
parser.add_argument(
"--learning_rate",
type=float,
default=5e-5,
help="Initial learning rate (after the potential warmup period) to use.",
)
parser.add_argument("--weight_decay", type=float, default=0.0, help="Weight decay to use.")
parser.add_argument("--num_train_epochs", type=int, default=3, help="Total number of training epochs to perform.")
parser.add_argument(
"--max_train_steps",
type=int,
default=None,
help="Total number of training steps to perform. If provided, overrides num_train_epochs.",
)
parser.add_argument(
"--gradient_accumulation_steps",
type=int,
default=1,
help="Number of updates steps to accumulate before performing a backward/update pass.",
)
parser.add_argument(
"--lr_scheduler_type",
type=SchedulerType,
default="linear",
help="The scheduler type to use.",
choices=["linear", "cosine", "cosine_with_restarts", "polynomial", "constant", "constant_with_warmup"],
)
parser.add_argument(
"--num_warmup_steps", type=int, default=0, help="Number of steps for the warmup in the lr scheduler."
)
parser.add_argument("--output_dir", type=str, default=None, help="Where to store the final model.")
parser.add_argument("--seed", type=int, default=None, help="A seed for reproducible training.")
parser.add_argument(
"--model_type",
type=str,
default=None,
help="Model type to use if training from scratch.",
choices=MODEL_TYPES,
)
parser.add_argument(
"--debug",
action="store_true",
help="Activate debug mode and run training only with a subset of data.",
)
parser.add_argument("--push_to_hub", action="store_true", help="Whether or not to push the model to the Hub.")
parser.add_argument(
"--hub_model_id", type=str, help="The name of the repository to keep in sync with the local `output_dir`."
)
parser.add_argument("--hub_token", type=str, help="The token to use to push to the Model Hub.")
args = parser.parse_args()
if args.push_to_hub:
assert args.output_dir is not None, "Need an `output_dir` to create a repo when `--push_to_hub` is passed."
return args
@dataclass
class DataCollatorForMultipleChoice:
"""
Data collator that will dynamically pad the inputs for multiple choice received.
Args:
tokenizer ([`PreTrainedTokenizer`] or [`PreTrainedTokenizerFast`]):
The tokenizer used for encoding the data.
padding (`bool`, `str` or [`~file_utils.PaddingStrategy`], *optional*, defaults to `True`):
Select a strategy to pad the returned sequences (according to the model's padding side and padding index)
among:
- `True` or `'longest'`: Pad to the longest sequence in the batch (or no padding if only a single sequence
if provided).
- `'max_length'`: Pad to a maximum length specified with the argument `max_length` or to the maximum
acceptable input length for the model if that argument is not provided.
- `False` or `'do_not_pad'` (default): No padding (i.e., can output a batch with sequences of different
lengths).
max_length (`int`, *optional*):
Maximum length of the returned list and optionally padding length (see above).
pad_to_multiple_of (`int`, *optional*):
If set will pad the sequence to a multiple of the provided value.
This is especially useful to enable the use of Tensor Cores on NVIDIA hardware with compute capability >=
7.5 (Volta).
"""
tokenizer: PreTrainedTokenizerBase
padding: Union[bool, str, PaddingStrategy] = True
max_length: Optional[int] = None
pad_to_multiple_of: Optional[int] = None
def __call__(self, features):
label_name = "label" if "label" in features[0].keys() else "labels"
labels = [feature.pop(label_name) for feature in features]
batch_size = len(features)
num_choices = len(features[0]["input_ids"])
flattened_features = [
[{k: v[i] for k, v in feature.items()} for i in range(num_choices)] for feature in features
]
flattened_features = list(chain(*flattened_features))
batch = self.tokenizer.pad(
flattened_features,
padding=self.padding,
max_length=self.max_length,
pad_to_multiple_of=self.pad_to_multiple_of,
return_tensors="pt",
)
# Un-flatten
batch = {k: v.view(batch_size, num_choices, -1) for k, v in batch.items()}
# Add back labels
batch["labels"] = torch.tensor(labels, dtype=torch.int64)
return batch
def main():
args = parse_args()
# Initialize the accelerator. We will let the accelerator handle device placement for us in this example.
accelerator = Accelerator()
# Make one log on every process with the configuration for debugging.
logging.basicConfig(
format="%(asctime)s - %(levelname)s - %(name)s - %(message)s",
datefmt="%m/%d/%Y %H:%M:%S",
level=logging.INFO,
)
logger.info(accelerator.state)
# Setup logging, we only want one process per machine to log things on the screen.
# accelerator.is_local_main_process is only True for one process per machine.
logger.setLevel(logging.INFO if accelerator.is_local_main_process else logging.ERROR)
if accelerator.is_local_main_process:
datasets.utils.logging.set_verbosity_warning()
transformers.utils.logging.set_verbosity_info()
else:
datasets.utils.logging.set_verbosity_error()
transformers.utils.logging.set_verbosity_error()
# If passed along, set the training seed now.
if args.seed is not None:
set_seed(args.seed)
# Handle the repository creation
if accelerator.is_main_process:
if args.push_to_hub:
if args.hub_model_id is None:
repo_name = get_full_repo_name(Path(args.output_dir).name, token=args.hub_token)
else:
repo_name = args.hub_model_id
repo = Repository(args.output_dir, clone_from=repo_name)
elif args.output_dir is not None:
os.makedirs(args.output_dir, exist_ok=True)
accelerator.wait_for_everyone()
# Get the datasets: you can either provide your own CSV/JSON/TXT training and evaluation files (see below)
# or just provide the name of one of the public datasets available on the hub at https://huggingface.co/datasets/
# (the dataset will be downloaded automatically from the datasets Hub).
#
# For CSV/JSON files, this script will use the column called 'text' or the first column if no column called
# 'text' is found. You can easily tweak this behavior (see below).
#
# In distributed training, the load_dataset function guarantee that only one local process can concurrently
# download the dataset.
if args.dataset_name is not None:
# Downloading and loading a dataset from the hub.
raw_datasets = load_dataset(args.dataset_name, args.dataset_config_name)
else:
data_files = {}
if args.train_file is not None:
data_files["train"] = args.train_file
if args.validation_file is not None:
data_files["validation"] = args.validation_file
extension = args.train_file.split(".")[-1]
raw_datasets = load_dataset(extension, data_files=data_files)
# Trim a number of training examples
if args.debug:
for split in raw_datasets.keys():
raw_datasets[split] = raw_datasets[split].select(range(100))
# See more about loading any type of standard or custom dataset (from files, python dict, pandas DataFrame, etc) at
# https://huggingface.co/docs/datasets/loading_datasets.html.
if raw_datasets["train"] is not None:
column_names = raw_datasets["train"].column_names
else:
column_names = raw_datasets["validation"].column_names
# When using your own dataset or a different dataset from swag, you will probably need to change this.
ending_names = [f"ending{i}" for i in range(4)]
context_name = "sent1"
question_header_name = "sent2"
label_column_name = "label" if "label" in column_names else "labels"
# Load pretrained model and tokenizer
#
# In distributed training, the .from_pretrained methods guarantee that only one local process can concurrently
# download model & vocab.
if args.config_name:
config = AutoConfig.from_pretrained(args.model_name_or_path)
elif args.model_name_or_path:
config = AutoConfig.from_pretrained(args.model_name_or_path)
else:
config = CONFIG_MAPPING[args.model_type]()
logger.warning("You are instantiating a new config instance from scratch.")
if args.tokenizer_name:
tokenizer = AutoTokenizer.from_pretrained(args.tokenizer_name, use_fast=not args.use_slow_tokenizer)
elif args.model_name_or_path:
tokenizer = AutoTokenizer.from_pretrained(args.model_name_or_path, use_fast=not args.use_slow_tokenizer)
else:
raise ValueError(
"You are instantiating a new tokenizer from scratch. This is not supported by this script."
"You can do it from another script, save it, and load it from here, using --tokenizer_name."
)
if args.model_name_or_path:
model = AutoModelForMultipleChoice.from_pretrained(
args.model_name_or_path,
from_tf=bool(".ckpt" in args.model_name_or_path),
config=config,
)
else:
logger.info("Training new model from scratch")
model = AutoModelForMultipleChoice.from_config(config)
model.resize_token_embeddings(len(tokenizer))
# Preprocessing the datasets.
# First we tokenize all the texts.
padding = "max_length" if args.pad_to_max_length else False
def preprocess_function(examples):
first_sentences = [[context] * 4 for context in examples[context_name]]
question_headers = examples[question_header_name]
second_sentences = [
[f"{header} {examples[end][i]}" for end in ending_names] for i, header in enumerate(question_headers)
]
labels = examples[label_column_name]
# Flatten out
first_sentences = list(chain(*first_sentences))
second_sentences = list(chain(*second_sentences))
# Tokenize
tokenized_examples = tokenizer(
first_sentences,
second_sentences,
max_length=args.max_length,
padding=padding,
truncation=True,
)
# Un-flatten
tokenized_inputs = {k: [v[i : i + 4] for i in range(0, len(v), 4)] for k, v in tokenized_examples.items()}
tokenized_inputs["labels"] = labels
return tokenized_inputs
with accelerator.main_process_first():
processed_datasets = raw_datasets.map(
preprocess_function, batched=True, remove_columns=raw_datasets["train"].column_names
)
train_dataset = processed_datasets["train"]
eval_dataset = processed_datasets["validation"]
# Log a few random samples from the training set:
for index in random.sample(range(len(train_dataset)), 3):
logger.info(f"Sample {index} of the training set: {train_dataset[index]}.")
# DataLoaders creation:
if args.pad_to_max_length:
# If padding was already done ot max length, we use the default data collator that will just convert everything
# to tensors.
data_collator = default_data_collator
else:
# Otherwise, `DataCollatorWithPadding` will apply dynamic padding for us (by padding to the maximum length of
# the samples passed). When using mixed precision, we add `pad_to_multiple_of=8` to pad all tensors to multiple
# of 8s, which will enable the use of Tensor Cores on NVIDIA hardware with compute capability >= 7.5 (Volta).
data_collator = DataCollatorForMultipleChoice(
tokenizer, pad_to_multiple_of=(8 if accelerator.use_fp16 else None)
)
train_dataloader = DataLoader(
train_dataset, shuffle=True, collate_fn=data_collator, batch_size=args.per_device_train_batch_size
)
eval_dataloader = DataLoader(eval_dataset, collate_fn=data_collator, batch_size=args.per_device_eval_batch_size)
# Optimizer
# Split weights in two groups, one with weight decay and the other not.
no_decay = ["bias", "LayerNorm.weight"]
optimizer_grouped_parameters = [
{
"params": [p for n, p in model.named_parameters() if not any(nd in n for nd in no_decay)],
"weight_decay": args.weight_decay,
},
{
"params": [p for n, p in model.named_parameters() if any(nd in n for nd in no_decay)],
"weight_decay": 0.0,
},
]
optimizer = AdamW(optimizer_grouped_parameters, lr=args.learning_rate)
# Use the device given by the `accelerator` object.
device = accelerator.device
model.to(device)
# Prepare everything with our `accelerator`.
model, optimizer, train_dataloader, eval_dataloader = accelerator.prepare(
model, optimizer, train_dataloader, eval_dataloader
)
# Note -> the training dataloader needs to be prepared before we grab his length below (cause its length will be
# shorter in multiprocess)
# Scheduler and math around the number of training steps.
num_update_steps_per_epoch = math.ceil(len(train_dataloader) / args.gradient_accumulation_steps)
if args.max_train_steps is None:
args.max_train_steps = args.num_train_epochs * num_update_steps_per_epoch
else:
args.num_train_epochs = math.ceil(args.max_train_steps / num_update_steps_per_epoch)
lr_scheduler = get_scheduler(
name=args.lr_scheduler_type,
optimizer=optimizer,
num_warmup_steps=args.num_warmup_steps,
num_training_steps=args.max_train_steps,
)
# Metrics
metric = load_metric("accuracy")
# Train!
total_batch_size = args.per_device_train_batch_size * accelerator.num_processes * args.gradient_accumulation_steps
logger.info("***** Running training *****")
logger.info(f" Num examples = {len(train_dataset)}")
logger.info(f" Num Epochs = {args.num_train_epochs}")
logger.info(f" Instantaneous batch size per device = {args.per_device_train_batch_size}")
logger.info(f" Total train batch size (w. parallel, distributed & accumulation) = {total_batch_size}")
logger.info(f" Gradient Accumulation steps = {args.gradient_accumulation_steps}")
logger.info(f" Total optimization steps = {args.max_train_steps}")
# Only show the progress bar once on each machine.
progress_bar = tqdm(range(args.max_train_steps), disable=not accelerator.is_local_main_process)
completed_steps = 0
for epoch in range(args.num_train_epochs):
model.train()
for step, batch in enumerate(train_dataloader):
outputs = model(**batch)
loss = outputs.loss
loss = loss / args.gradient_accumulation_steps
accelerator.backward(loss)
if step % args.gradient_accumulation_steps == 0 or step == len(train_dataloader) - 1:
optimizer.step()
lr_scheduler.step()
optimizer.zero_grad()
progress_bar.update(1)
completed_steps += 1
if completed_steps >= args.max_train_steps:
break
model.eval()
for step, batch in enumerate(eval_dataloader):
with torch.no_grad():
outputs = model(**batch)
predictions = outputs.logits.argmax(dim=-1)
metric.add_batch(
predictions=accelerator.gather(predictions),
references=accelerator.gather(batch["labels"]),
)
eval_metric = metric.compute()
accelerator.print(f"epoch {epoch}: {eval_metric}")
if args.push_to_hub and epoch < args.num_train_epochs - 1:
accelerator.wait_for_everyone()
unwrapped_model = accelerator.unwrap_model(model)
unwrapped_model.save_pretrained(args.output_dir, save_function=accelerator.save)
if accelerator.is_main_process:
tokenizer.save_pretrained(args.output_dir)
repo.push_to_hub(
commit_message=f"Training in progress epoch {epoch}", blocking=False, auto_lfs_prune=True
)
if args.output_dir is not None:
accelerator.wait_for_everyone()
unwrapped_model = accelerator.unwrap_model(model)
unwrapped_model.save_pretrained(args.output_dir, save_function=accelerator.save)
if accelerator.is_main_process:
tokenizer.save_pretrained(args.output_dir)
if args.push_to_hub:
repo.push_to_hub(commit_message="End of training", auto_lfs_prune=True)
if __name__ == "__main__":
main()
| 21,483 | 39.921905 | 119 | py |
robust-transformers | robust-transformers-main/examples/pytorch/speech-recognition/run_speech_recognition_seq2seq.py | #!/usr/bin/env python
# coding=utf-8
# Copyright 2021 The HuggingFace Team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
"""
Fine-tuning the library models for sequence to sequence speech recognition.
"""
# You can also adapt this script on your own sequence to sequence speech
# recognition task. Pointers for this are left as comments.
import logging
import os
import sys
from dataclasses import dataclass, field
from typing import Any, Dict, List, Optional, Union
import datasets
import torch
from datasets import DatasetDict, load_dataset, load_metric
import transformers
from transformers import (
AutoConfig,
AutoFeatureExtractor,
AutoModelForSpeechSeq2Seq,
AutoProcessor,
AutoTokenizer,
HfArgumentParser,
Seq2SeqTrainer,
Seq2SeqTrainingArguments,
set_seed,
)
from transformers.trainer_utils import get_last_checkpoint, is_main_process
from transformers.utils import check_min_version
from transformers.utils.versions import require_version
# Will error if the minimal version of Transformers is not installed. Remove at your own risks.
check_min_version("4.18.0.dev0")
require_version("datasets>=1.18.0", "To fix: pip install -r examples/pytorch/speech-recognition/requirements.txt")
logger = logging.getLogger(__name__)
@dataclass
class ModelArguments:
"""
Arguments pertaining to which model/config/tokenizer we are going to fine-tune from.
"""
model_name_or_path: str = field(
metadata={"help": "Path to pretrained model or model identifier from huggingface.co/models"}
)
config_name: Optional[str] = field(
default=None, metadata={"help": "Pretrained config name or path if not the same as model_name"}
)
tokenizer_name: Optional[str] = field(
default=None, metadata={"help": "Pretrained tokenizer name or path if not the same as model_name"}
)
feature_extractor_name: Optional[str] = field(
default=None, metadata={"help": "feature extractor name or path if not the same as model_name"}
)
cache_dir: Optional[str] = field(
default=None,
metadata={"help": "Where to store the pretrained models downloaded from huggingface.co"},
)
use_fast_tokenizer: bool = field(
default=True,
metadata={"help": "Whether to use one of the fast tokenizer (backed by the tokenizers library) or not."},
)
model_revision: str = field(
default="main",
metadata={"help": "The specific model version to use (can be a branch name, tag name or commit id)."},
)
use_auth_token: bool = field(
default=False,
metadata={
"help": "Will use the token generated when running `transformers-cli login` (necessary to use this script "
"with private models)."
},
)
freeze_feature_encoder: bool = field(
default=True, metadata={"help": "Whether to freeze the feature encoder layers of the model."}
)
@dataclass
class DataTrainingArguments:
"""
Arguments pertaining to what data we are going to input our model for training and eval.
"""
dataset_name: str = field(
default=None, metadata={"help": "The name of the dataset to use (via the datasets library)."}
)
dataset_config_name: Optional[str] = field(
default=None, metadata={"help": "The configuration name of the dataset to use (via the datasets library)."}
)
text_column: Optional[str] = field(
default=None,
metadata={"help": "The name of the column in the datasets containing the full texts (for summarization)."},
)
overwrite_cache: bool = field(
default=False, metadata={"help": "Overwrite the cached training and evaluation sets"}
)
preprocessing_num_workers: Optional[int] = field(
default=None,
metadata={"help": "The number of processes to use for the preprocessing."},
)
max_train_samples: Optional[int] = field(
default=None,
metadata={
"help": "For debugging purposes or quicker training, truncate the number of training examples to this "
"value if set."
},
)
max_eval_samples: Optional[int] = field(
default=None,
metadata={
"help": "For debugging purposes or quicker training, truncate the number of evaluation examples to this "
"value if set."
},
)
audio_column_name: str = field(
default="audio",
metadata={"help": "The name of the dataset column containing the audio data. Defaults to 'audio'"},
)
text_column_name: str = field(
default="text",
metadata={"help": "The name of the dataset column containing the text data. Defaults to 'text'"},
)
max_duration_in_seconds: float = field(
default=20.0,
metadata={
"help": "Truncate audio files that are longer than `max_duration_in_seconds` seconds to 'max_duration_in_seconds`"
},
)
min_duration_in_seconds: float = field(
default=0.0, metadata={"help": "Filter audio files that are shorter than `min_duration_in_seconds` seconds"}
)
preprocessing_only: bool = field(
default=False,
metadata={
"help": "Whether to only do data preprocessing and skip training. "
"This is especially useful when data preprocessing errors out in distributed training due to timeout. "
"In this case, one should run the preprocessing in a non-distributed setup with `preprocessing_only=True` "
"so that the cached datasets can consequently be loaded in distributed training"
},
)
train_split_name: str = field(
default="train",
metadata={
"help": "The name of the training data set split to use (via the datasets library). Defaults to 'train'"
},
)
eval_split_name: str = field(
default="test",
metadata={
"help": "The name of the training data set split to use (via the datasets library). Defaults to 'train'"
},
)
do_lower_case: bool = field(
default=True,
metadata={"help": "Whether the target text should be lower cased."},
)
@dataclass
class DataCollatorSpeechSeq2SeqWithPadding:
"""
Data collator that will dynamically pad the inputs received.
Args:
processor ([`Wav2Vec2Processor`])
The processor used for proccessing the data.
decoder_start_token_id (`int`)
The begin-of-sentence of the decoder.
"""
processor: Any
decoder_start_token_id: int
def __call__(self, features: List[Dict[str, Union[List[int], torch.Tensor]]]) -> Dict[str, torch.Tensor]:
# split inputs and labels since they have to be of different lenghts and need
# different padding methods
input_features = [{"input_values": feature["input_values"]} for feature in features]
label_features = [{"input_ids": feature["labels"]} for feature in features]
batch = self.processor.feature_extractor.pad(input_features, return_tensors="pt")
labels_batch = self.processor.tokenizer.pad(label_features, return_tensors="pt")
# replace padding with -100 to ignore loss correctly
labels = labels_batch["input_ids"].masked_fill(labels_batch.attention_mask.ne(1), -100)
# if bos token is appended in previous tokenization step,
# cut bos token here as it's append later anyways
if (labels[:, 0] == self.decoder_start_token_id).all().cpu().item():
labels = labels[:, 1:]
batch["labels"] = labels
return batch
def main():
# 1. Parse input arguments
# See all possible arguments in src/transformers/training_args.py
# or by passing the --help flag to this script.
# We now keep distinct sets of args, for a cleaner separation of concerns.
parser = HfArgumentParser((ModelArguments, DataTrainingArguments, Seq2SeqTrainingArguments))
if len(sys.argv) == 2 and sys.argv[1].endswith(".json"):
# If we pass only one argument to the script and it's the path to a json file,
# let's parse it to get our arguments.
model_args, data_args, training_args = parser.parse_json_file(json_file=os.path.abspath(sys.argv[1]))
else:
model_args, data_args, training_args = parser.parse_args_into_dataclasses()
# 2. Setup logging
logging.basicConfig(
format="%(asctime)s - %(levelname)s - %(name)s - %(message)s",
datefmt="%m/%d/%Y %H:%M:%S",
handlers=[logging.StreamHandler(sys.stdout)],
)
log_level = training_args.get_process_log_level()
logger.setLevel(log_level)
datasets.utils.logging.set_verbosity(log_level)
transformers.utils.logging.set_verbosity(log_level)
transformers.utils.logging.enable_default_handler()
transformers.utils.logging.enable_explicit_format()
logger.setLevel(logging.INFO if is_main_process(training_args.local_rank) else logging.WARN)
# Log on each process the small summary:
logger.warning(
f"Process rank: {training_args.local_rank}, device: {training_args.device}, n_gpu: {training_args.n_gpu}"
f"distributed training: {bool(training_args.local_rank != -1)}, 16-bits training: {training_args.fp16}"
)
logger.info(f"Training/evaluation parameters {training_args}")
# Set the verbosity to info of the Transformers logger (on main process only):
if is_main_process(training_args.local_rank):
transformers.utils.logging.set_verbosity_info()
logger.info("Training/evaluation parameters %s", training_args)
# 3. Detecting last checkpoint and eventualy continue from last checkpoint
last_checkpoint = None
if os.path.isdir(training_args.output_dir) and training_args.do_train and not training_args.overwrite_output_dir:
last_checkpoint = get_last_checkpoint(training_args.output_dir)
if last_checkpoint is None and len(os.listdir(training_args.output_dir)) > 0:
raise ValueError(
f"Output directory ({training_args.output_dir}) already exists and is not empty. "
"Use --overwrite_output_dir to overcome."
)
elif last_checkpoint is not None and training_args.resume_from_checkpoint is None:
logger.info(
f"Checkpoint detected, resuming training at {last_checkpoint}. To avoid this behavior, change "
"the `--output_dir` or add `--overwrite_output_dir` to train from scratch."
)
# Set seed before initializing model.
set_seed(training_args.seed)
# 4. Load dataset
raw_datasets = DatasetDict()
if training_args.do_train:
raw_datasets["train"] = load_dataset(
data_args.dataset_name, data_args.dataset_config_name, split=data_args.train_split_name
)
if training_args.do_eval:
raw_datasets["eval"] = load_dataset(
data_args.dataset_name, data_args.dataset_config_name, split=data_args.eval_split_name
)
if data_args.audio_column_name not in next(iter(raw_datasets.values())).column_names:
raise ValueError(
f"--audio_column_name '{data_args.audio_column_name}' not found in dataset '{data_args.dataset_name}'. "
"Make sure to set `--audio_column_name` to the correct audio column - one of "
f"{', '.join(next(iter(raw_datasets.values())).column_names)}."
)
if data_args.text_column_name not in next(iter(raw_datasets.values())).column_names:
raise ValueError(
f"--text_column_name {data_args.text_column_name} not found in dataset '{data_args.dataset_name}'. "
"Make sure to set `--text_column_name` to the correct text column - one of "
f"{', '.join(next(iter(raw_datasets.values())).column_names)}."
)
# 5. Load pretrained model, tokenizer, and feature extractor
#
# Distributed training:
# The .from_pretrained methods guarantee that only one local process can concurrently
config = AutoConfig.from_pretrained(
model_args.config_name if model_args.config_name else model_args.model_name_or_path,
cache_dir=model_args.cache_dir,
revision=model_args.model_revision,
use_auth_token=True if model_args.use_auth_token else None,
)
feature_extractor = AutoFeatureExtractor.from_pretrained(
model_args.feature_extractor_name if model_args.feature_extractor_name else model_args.model_name_or_path,
cache_dir=model_args.cache_dir,
revision=model_args.model_revision,
use_auth_token=True if model_args.use_auth_token else None,
)
tokenizer = AutoTokenizer.from_pretrained(
model_args.tokenizer_name if model_args.tokenizer_name else model_args.model_name_or_path,
cache_dir=model_args.cache_dir,
use_fast=model_args.use_fast_tokenizer,
revision=model_args.model_revision,
use_auth_token=True if model_args.use_auth_token else None,
)
model = AutoModelForSpeechSeq2Seq.from_pretrained(
model_args.model_name_or_path,
config=config,
cache_dir=model_args.cache_dir,
revision=model_args.model_revision,
use_auth_token=True if model_args.use_auth_token else None,
)
if model.config.decoder_start_token_id is None:
raise ValueError("Make sure that `config.decoder_start_token_id` is correctly defined")
if model_args.freeze_feature_encoder:
model.freeze_feature_encoder()
# 6. Resample speech dataset if necassary
dataset_sampling_rate = next(iter(raw_datasets.values())).features[data_args.audio_column_name].sampling_rate
if dataset_sampling_rate != feature_extractor.sampling_rate:
raw_datasets = raw_datasets.cast_column(
data_args.audio_column_name, datasets.features.Audio(sampling_rate=feature_extractor.sampling_rate)
)
# 7. Preprocessing the datasets.
# We need to read the audio files as arrays and tokenize the targets.
max_input_length = data_args.max_duration_in_seconds * feature_extractor.sampling_rate
min_input_length = data_args.min_duration_in_seconds * feature_extractor.sampling_rate
audio_column_name = data_args.audio_column_name
num_workers = data_args.preprocessing_num_workers
text_column_name = data_args.text_column_name
model_input_name = feature_extractor.model_input_names[0]
do_lower_case = data_args.do_lower_case
if data_args.max_train_samples is not None:
raw_datasets["train"] = raw_datasets["train"].select(range(data_args.max_train_samples))
if data_args.max_eval_samples is not None:
raw_datasets["eval"] = raw_datasets["eval"].select(range(data_args.max_eval_samples))
def prepare_dataset(batch):
# process audio
sample = batch[audio_column_name]
inputs = feature_extractor(sample["array"], sampling_rate=sample["sampling_rate"])
# process audio length
batch[model_input_name] = inputs.input_values[0]
batch["input_length"] = len(batch["input_values"])
# process targets
input_str = batch[text_column_name].lower() if do_lower_case else batch[text_column_name]
batch["labels"] = tokenizer(input_str).input_ids
return batch
with training_args.main_process_first(desc="dataset map pre-processing"):
vectorized_datasets = raw_datasets.map(
prepare_dataset,
remove_columns=next(iter(raw_datasets.values())).column_names,
num_proc=data_args.preprocessing_num_workers,
desc="preprocess train dataset",
)
# filter data that is shorter than min_input_length or longer than
# max_input_length
def is_audio_in_length_range(length):
return length > min_input_length and length < max_input_length
vectorized_datasets = vectorized_datasets.filter(
is_audio_in_length_range,
num_proc=num_workers,
input_columns=["input_length"],
)
# for large datasets it is advised to run the preprocessing on a
# single machine first with `args.preprocessing_only` since there will mostly likely
# be a timeout when running the script in distributed mode.
# In a second step `args.preprocessing_only` can then be set to `False` to load the
# cached dataset
if data_args.preprocessing_only:
cache = {k: v.cache_files for k, v in vectorized_datasets.items()}
logger.info(f"Data preprocessing finished. Files cached at {cache}.")
return
# 8. Load Metric
metric = load_metric("wer")
def compute_metrics(pred):
pred_ids = pred.predictions
pred.label_ids[pred.label_ids == -100] = tokenizer.pad_token_id
pred_str = tokenizer.batch_decode(pred_ids, skip_special_tokens=True)
# we do not want to group tokens when computing the metrics
label_str = tokenizer.batch_decode(pred.label_ids, skip_special_tokens=True)
wer = metric.compute(predictions=pred_str, references=label_str)
return {"wer": wer}
# 9. Create a single speech processor
if is_main_process(training_args.local_rank):
# save feature extractor, tokenizer and config
feature_extractor.save_pretrained(training_args.output_dir)
tokenizer.save_pretrained(training_args.output_dir)
config.save_pretrained(training_args.output_dir)
processor = AutoProcessor.from_pretrained(training_args.output_dir)
# 10. Define data collator
data_collator = DataCollatorSpeechSeq2SeqWithPadding(
processor=processor, decoder_start_token_id=model.config.decoder_start_token_id
)
# 11. Initialize Trainer
trainer = Seq2SeqTrainer(
model=model,
args=training_args,
train_dataset=vectorized_datasets["train"] if training_args.do_train else None,
eval_dataset=vectorized_datasets["eval"] if training_args.do_eval else None,
tokenizer=feature_extractor,
data_collator=data_collator,
compute_metrics=compute_metrics if training_args.predict_with_generate else None,
)
# 12. Training
if training_args.do_train:
checkpoint = None
if training_args.resume_from_checkpoint is not None:
checkpoint = training_args.resume_from_checkpoint
elif last_checkpoint is not None:
checkpoint = last_checkpoint
train_result = trainer.train(resume_from_checkpoint=checkpoint)
trainer.save_model() # Saves the feature extractor too for easy upload
metrics = train_result.metrics
max_train_samples = (
data_args.max_train_samples
if data_args.max_train_samples is not None
else len(vectorized_datasets["train"])
)
metrics["train_samples"] = min(max_train_samples, len(vectorized_datasets["train"]))
trainer.log_metrics("train", metrics)
trainer.save_metrics("train", metrics)
trainer.save_state()
# 13. Evaluation
results = {}
if training_args.do_eval:
logger.info("*** Evaluate ***")
metrics = trainer.evaluate(
metric_key_prefix="eval", max_length=model.config.max_length, num_beams=model.config.num_beams
)
max_eval_samples = (
data_args.max_eval_samples if data_args.max_eval_samples is not None else len(vectorized_datasets["eval"])
)
metrics["eval_samples"] = min(max_eval_samples, len(vectorized_datasets["eval"]))
trainer.log_metrics("eval", metrics)
trainer.save_metrics("eval", metrics)
# 14. Write Training Stats
kwargs = {"finetuned_from": model_args.model_name_or_path, "tasks": "speech recognition"}
if data_args.dataset_name is not None:
kwargs["dataset_tags"] = data_args.dataset_name
if data_args.dataset_config_name is not None:
kwargs["dataset_args"] = data_args.dataset_config_name
kwargs["dataset"] = f"{data_args.dataset_name} {data_args.dataset_config_name}"
else:
kwargs["dataset"] = data_args.dataset_name
if training_args.push_to_hub:
trainer.push_to_hub(**kwargs)
else:
trainer.create_model_card(**kwargs)
return results
if __name__ == "__main__":
main()
| 20,824 | 40.40159 | 126 | py |
robust-transformers | robust-transformers-main/examples/pytorch/speech-recognition/run_speech_recognition_ctc.py | #!/usr/bin/env python
# coding=utf-8
# Copyright 2021 The HuggingFace Inc. team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
""" Fine-tuning a 🤗 Transformers CTC model for automatic speech recognition"""
import functools
import json
import logging
import os
import re
import sys
import warnings
from dataclasses import dataclass, field
from typing import Dict, List, Optional, Union
import datasets
import numpy as np
import torch
from datasets import DatasetDict, load_dataset, load_metric
import transformers
from transformers import (
AutoConfig,
AutoFeatureExtractor,
AutoModelForCTC,
AutoProcessor,
AutoTokenizer,
HfArgumentParser,
Trainer,
TrainingArguments,
Wav2Vec2Processor,
set_seed,
)
from transformers.trainer_utils import get_last_checkpoint, is_main_process
from transformers.utils import check_min_version
from transformers.utils.versions import require_version
# Will error if the minimal version of Transformers is not installed. Remove at your own risks.
check_min_version("4.18.0.dev0")
require_version("datasets>=1.18.0", "To fix: pip install -r examples/pytorch/speech-recognition/requirements.txt")
logger = logging.getLogger(__name__)
def list_field(default=None, metadata=None):
return field(default_factory=lambda: default, metadata=metadata)
@dataclass
class ModelArguments:
"""
Arguments pertaining to which model/config/tokenizer we are going to fine-tune from.
"""
model_name_or_path: str = field(
metadata={"help": "Path to pretrained model or model identifier from huggingface.co/models"}
)
tokenizer_name_or_path: Optional[str] = field(
default=None,
metadata={"help": "Path to pretrained tokenizer or tokenizer identifier from huggingface.co/models"},
)
cache_dir: Optional[str] = field(
default=None,
metadata={"help": "Where do you want to store the pretrained models downloaded from huggingface.co"},
)
freeze_feature_encoder: bool = field(
default=True, metadata={"help": "Whether to freeze the feature encoder layers of the model."}
)
attention_dropout: float = field(
default=0.0, metadata={"help": "The dropout ratio for the attention probabilities."}
)
activation_dropout: float = field(
default=0.0, metadata={"help": "The dropout ratio for activations inside the fully connected layer."}
)
feat_proj_dropout: float = field(default=0.0, metadata={"help": "The dropout ratio for the projected features."})
hidden_dropout: float = field(
default=0.0,
metadata={
"help": "The dropout probability for all fully connected layers in the embeddings, encoder, and pooler."
},
)
final_dropout: float = field(
default=0.0,
metadata={"help": "The dropout probability for the final projection layer."},
)
mask_time_prob: float = field(
default=0.05,
metadata={
"help": "Probability of each feature vector along the time axis to be chosen as the start of the vector"
"span to be masked. Approximately ``mask_time_prob * sequence_length // mask_time_length`` feature"
"vectors will be masked along the time axis."
},
)
mask_time_length: int = field(
default=10,
metadata={"help": "Length of vector span to mask along the time axis."},
)
mask_feature_prob: float = field(
default=0.0,
metadata={
"help": "Probability of each feature vector along the feature axis to be chosen as the start of the vector"
"span to be masked. Approximately ``mask_feature_prob * sequence_length // mask_feature_length`` feature bins will be masked along the time axis."
},
)
mask_feature_length: int = field(
default=10,
metadata={"help": "Length of vector span to mask along the feature axis."},
)
layerdrop: float = field(default=0.0, metadata={"help": "The LayerDrop probability."})
ctc_loss_reduction: Optional[str] = field(
default="mean", metadata={"help": "The way the ctc loss should be reduced. Should be one of 'mean' or 'sum'."}
)
@dataclass
class DataTrainingArguments:
"""
Arguments pertaining to what data we are going to input our model for training and eval.
Using `HfArgumentParser` we can turn this class
into argparse arguments to be able to specify them on
the command line.
"""
dataset_name: str = field(
metadata={"help": "The configuration name of the dataset to use (via the datasets library)."}
)
dataset_config_name: str = field(
default=None, metadata={"help": "The configuration name of the dataset to use (via the datasets library)."}
)
train_split_name: str = field(
default="train+validation",
metadata={
"help": "The name of the training data set split to use (via the datasets library). Defaults to "
"'train+validation'"
},
)
eval_split_name: str = field(
default="test",
metadata={
"help": "The name of the evaluation data set split to use (via the datasets library). Defaults to 'test'"
},
)
audio_column_name: str = field(
default="audio",
metadata={"help": "The name of the dataset column containing the audio data. Defaults to 'audio'"},
)
text_column_name: str = field(
default="text",
metadata={"help": "The name of the dataset column containing the text data. Defaults to 'text'"},
)
overwrite_cache: bool = field(
default=False, metadata={"help": "Overwrite the cached preprocessed datasets or not."}
)
preprocessing_num_workers: Optional[int] = field(
default=None,
metadata={"help": "The number of processes to use for the preprocessing."},
)
max_train_samples: Optional[int] = field(
default=None,
metadata={
"help": "For debugging purposes or quicker training, truncate the number of training examples to this "
"value if set."
},
)
max_eval_samples: Optional[int] = field(
default=None,
metadata={
"help": "For debugging purposes or quicker training, truncate the number of validation examples to this "
"value if set."
},
)
chars_to_ignore: Optional[List[str]] = list_field(
default=None,
metadata={"help": "A list of characters to remove from the transcripts."},
)
eval_metrics: List[str] = list_field(
default=["wer"],
metadata={"help": "A list of metrics the model should be evaluated on. E.g. `'wer cer'`"},
)
max_duration_in_seconds: float = field(
default=20.0,
metadata={
"help": "Filter audio files that are longer than `max_duration_in_seconds` seconds to 'max_duration_in_seconds`"
},
)
min_duration_in_seconds: float = field(
default=0.0, metadata={"help": "Filter audio files that are shorter than `min_duration_in_seconds` seconds"}
)
preprocessing_only: bool = field(
default=False,
metadata={
"help": "Whether to only do data preprocessing and skip training. "
"This is especially useful when data preprocessing errors out in distributed training due to timeout. "
"In this case, one should run the preprocessing in a non-distributed setup with `preprocessing_only=True` "
"so that the cached datasets can consequently be loaded in distributed training"
},
)
use_auth_token: bool = field(
default=False,
metadata={
"help": "If :obj:`True`, will use the token generated when running"
":obj:`transformers-cli login` as HTTP bearer authorization for remote files."
},
)
unk_token: str = field(
default="[UNK]",
metadata={"help": "The unk token for the tokenizer"},
)
pad_token: str = field(
default="[PAD]",
metadata={"help": "The padding token for the tokenizer"},
)
word_delimiter_token: str = field(
default="|",
metadata={"help": "The word delimiter token for the tokenizer"},
)
phoneme_language: Optional[str] = field(
default=None,
metadata={
"help": "The target language that should be used be"
" passed to the tokenizer for tokenization. Note that"
" this is only relevant if the model classifies the"
" input audio to a sequence of phoneme sequences."
},
)
@dataclass
class DataCollatorCTCWithPadding:
"""
Data collator that will dynamically pad the inputs received.
Args:
processor (:class:`~transformers.AutoProcessor`)
The processor used for proccessing the data.
padding (:obj:`bool`, :obj:`str` or :class:`~transformers.tokenization_utils_base.PaddingStrategy`, `optional`, defaults to :obj:`True`):
Select a strategy to pad the returned sequences (according to the model's padding side and padding index)
among:
* :obj:`True` or :obj:`'longest'`: Pad to the longest sequence in the batch (or no padding if only a single
sequence if provided).
* :obj:`'max_length'`: Pad to a maximum length specified with the argument :obj:`max_length` or to the
maximum acceptable input length for the model if that argument is not provided.
* :obj:`False` or :obj:`'do_not_pad'` (default): No padding (i.e., can output a batch with sequences of
different lengths).
max_length (:obj:`int`, `optional`):
Maximum length of the ``input_values`` of the returned list and optionally padding length (see above).
max_length_labels (:obj:`int`, `optional`):
Maximum length of the ``labels`` returned list and optionally padding length (see above).
pad_to_multiple_of (:obj:`int`, `optional`):
If set will pad the sequence to a multiple of the provided value.
This is especially useful to enable the use of Tensor Cores on NVIDIA hardware with compute capability >=
7.5 (Volta).
"""
processor: AutoProcessor
padding: Union[bool, str] = "longest"
pad_to_multiple_of: Optional[int] = None
pad_to_multiple_of_labels: Optional[int] = None
def __call__(self, features: List[Dict[str, Union[List[int], torch.Tensor]]]) -> Dict[str, torch.Tensor]:
# split inputs and labels since they have to be of different lenghts and need
# different padding methods
input_features = [{"input_values": feature["input_values"]} for feature in features]
label_features = [{"input_ids": feature["labels"]} for feature in features]
batch = self.processor.pad(
input_features,
padding=self.padding,
pad_to_multiple_of=self.pad_to_multiple_of,
return_tensors="pt",
)
with self.processor.as_target_processor():
labels_batch = self.processor.pad(
label_features,
padding=self.padding,
pad_to_multiple_of=self.pad_to_multiple_of_labels,
return_tensors="pt",
)
# replace padding with -100 to ignore loss correctly
labels = labels_batch["input_ids"].masked_fill(labels_batch.attention_mask.ne(1), -100)
batch["labels"] = labels
return batch
def create_vocabulary_from_data(
datasets: DatasetDict,
word_delimiter_token: Optional[str] = None,
unk_token: Optional[str] = None,
pad_token: Optional[str] = None,
):
# Given training and test labels create vocabulary
def extract_all_chars(batch):
all_text = " ".join(batch["target_text"])
vocab = list(set(all_text))
return {"vocab": [vocab], "all_text": [all_text]}
vocabs = datasets.map(
extract_all_chars,
batched=True,
batch_size=-1,
keep_in_memory=True,
remove_columns=datasets["train"].column_names,
)
# take union of all unique characters in each dataset
vocab_set = functools.reduce(
lambda vocab_1, vocab_2: set(vocab_1["vocab"][0]) | set(vocab_2["vocab"][0]), vocabs.values()
)
vocab_dict = {v: k for k, v in enumerate(sorted(list(vocab_set)))}
# replace white space with delimiter token
if word_delimiter_token is not None:
vocab_dict[word_delimiter_token] = vocab_dict[" "]
del vocab_dict[" "]
# add unk and pad token
if unk_token is not None:
vocab_dict[unk_token] = len(vocab_dict)
if pad_token is not None:
vocab_dict[pad_token] = len(vocab_dict)
return vocab_dict
def main():
# See all possible arguments in src/transformers/training_args.py
# or by passing the --help flag to this script.
# We now keep distinct sets of args, for a cleaner separation of concerns.
parser = HfArgumentParser((ModelArguments, DataTrainingArguments, TrainingArguments))
if len(sys.argv) == 2 and sys.argv[1].endswith(".json"):
# If we pass only one argument to the script and it's the path to a json file,
# let's parse it to get our arguments.
model_args, data_args, training_args = parser.parse_json_file(json_file=os.path.abspath(sys.argv[1]))
else:
model_args, data_args, training_args = parser.parse_args_into_dataclasses()
# Detecting last checkpoint.
last_checkpoint = None
if os.path.isdir(training_args.output_dir) and training_args.do_train and not training_args.overwrite_output_dir:
last_checkpoint = get_last_checkpoint(training_args.output_dir)
if last_checkpoint is None and len(os.listdir(training_args.output_dir)) > 0:
raise ValueError(
f"Output directory ({training_args.output_dir}) already exists and is not empty. "
"Use --overwrite_output_dir to overcome."
)
elif last_checkpoint is not None:
logger.info(
f"Checkpoint detected, resuming training at {last_checkpoint}. To avoid this behavior, change "
"the `--output_dir` or add `--overwrite_output_dir` to train from scratch."
)
# Setup logging
logging.basicConfig(
format="%(asctime)s - %(levelname)s - %(name)s - %(message)s",
datefmt="%m/%d/%Y %H:%M:%S",
handlers=[logging.StreamHandler(sys.stdout)],
)
logger.setLevel(logging.INFO if is_main_process(training_args.local_rank) else logging.WARN)
# Log on each process the small summary:
logger.warning(
f"Process rank: {training_args.local_rank}, device: {training_args.device}, n_gpu: {training_args.n_gpu}"
f"distributed training: {bool(training_args.local_rank != -1)}, 16-bits training: {training_args.fp16}"
)
# Set the verbosity to info of the Transformers logger (on main process only):
if is_main_process(training_args.local_rank):
transformers.utils.logging.set_verbosity_info()
logger.info("Training/evaluation parameters %s", training_args)
# Set seed before initializing model.
set_seed(training_args.seed)
# 1. First, let's load the dataset
raw_datasets = DatasetDict()
if training_args.do_train:
raw_datasets["train"] = load_dataset(
data_args.dataset_name,
data_args.dataset_config_name,
split=data_args.train_split_name,
use_auth_token=data_args.use_auth_token,
)
if data_args.audio_column_name not in raw_datasets["train"].column_names:
raise ValueError(
f"--audio_column_name '{data_args.audio_column_name}' not found in dataset '{data_args.dataset_name}'. "
"Make sure to set `--audio_column_name` to the correct audio column - one of "
f"{', '.join(raw_datasets['train'].column_names)}."
)
if data_args.text_column_name not in raw_datasets["train"].column_names:
raise ValueError(
f"--text_column_name {data_args.text_column_name} not found in dataset '{data_args.dataset_name}'. "
"Make sure to set `--text_column_name` to the correct text column - one of "
f"{', '.join(raw_datasets['train'].column_names)}."
)
if data_args.max_train_samples is not None:
raw_datasets["train"] = raw_datasets["train"].select(range(data_args.max_train_samples))
if training_args.do_eval:
raw_datasets["eval"] = load_dataset(
data_args.dataset_name,
data_args.dataset_config_name,
split=data_args.eval_split_name,
use_auth_token=data_args.use_auth_token,
)
if data_args.max_eval_samples is not None:
raw_datasets["eval"] = raw_datasets["eval"].select(range(data_args.max_eval_samples))
# 2. We remove some special characters from the datasets
# that make training complicated and do not help in transcribing the speech
# E.g. characters, such as `,` and `.` do not really have an acoustic characteristic
# that could be easily picked up by the model
chars_to_ignore_regex = (
f'[{"".join(data_args.chars_to_ignore)}]' if data_args.chars_to_ignore is not None else None
)
text_column_name = data_args.text_column_name
def remove_special_characters(batch):
if chars_to_ignore_regex is not None:
batch["target_text"] = re.sub(chars_to_ignore_regex, "", batch[text_column_name]).lower() + " "
else:
batch["target_text"] = batch[text_column_name].lower() + " "
return batch
with training_args.main_process_first(desc="dataset map special characters removal"):
raw_datasets = raw_datasets.map(
remove_special_characters,
remove_columns=[text_column_name],
desc="remove special characters from datasets",
)
# save special tokens for tokenizer
word_delimiter_token = data_args.word_delimiter_token
unk_token = data_args.unk_token
pad_token = data_args.pad_token
# 3. Next, let's load the config as we might need it to create
# the tokenizer
# load config
config = AutoConfig.from_pretrained(
model_args.model_name_or_path, cache_dir=model_args.cache_dir, use_auth_token=data_args.use_auth_token
)
# 4. Next, if no tokenizer file is defined,
# we create the vocabulary of the model by extracting all unique characters from
# the training and evaluation datasets
# We need to make sure that only first rank saves vocabulary
# make sure all processes wait until vocab is created
tokenizer_name_or_path = model_args.tokenizer_name_or_path
tokenizer_kwargs = {}
if tokenizer_name_or_path is None:
# save vocab in training output dir
tokenizer_name_or_path = training_args.output_dir
vocab_file = os.path.join(tokenizer_name_or_path, "vocab.json")
with training_args.main_process_first():
if training_args.overwrite_output_dir and os.path.isfile(vocab_file):
os.remove(vocab_file)
with training_args.main_process_first(desc="dataset map vocabulary creation"):
if not os.path.isfile(vocab_file):
os.makedirs(tokenizer_name_or_path, exist_ok=True)
vocab_dict = create_vocabulary_from_data(
raw_datasets,
word_delimiter_token=word_delimiter_token,
unk_token=unk_token,
pad_token=pad_token,
)
# save vocab dict to be loaded into tokenizer
with open(vocab_file, "w") as file:
json.dump(vocab_dict, file)
# if tokenizer has just been created
# it is defined by `tokenizer_class` if present in config else by `model_type`
tokenizer_kwargs = {
"config": config if config.tokenizer_class is not None else None,
"tokenizer_type": config.model_type if config.tokenizer_class is None else None,
"unk_token": unk_token,
"pad_token": pad_token,
"word_delimiter_token": word_delimiter_token,
}
# 5. Now we can instantiate the feature extractor, tokenizer and model
# Note for distributed training, the .from_pretrained methods guarantee that only
# one local process can concurrently download model & vocab.
# load feature_extractor and tokenizer
tokenizer = AutoTokenizer.from_pretrained(
tokenizer_name_or_path,
use_auth_token=data_args.use_auth_token,
**tokenizer_kwargs,
)
feature_extractor = AutoFeatureExtractor.from_pretrained(
model_args.model_name_or_path, cache_dir=model_args.cache_dir, use_auth_token=data_args.use_auth_token
)
# adapt config
config.update(
{
"feat_proj_dropout": model_args.feat_proj_dropout,
"attention_dropout": model_args.attention_dropout,
"hidden_dropout": model_args.hidden_dropout,
"final_dropout": model_args.final_dropout,
"mask_time_prob": model_args.mask_time_prob,
"mask_time_length": model_args.mask_time_length,
"mask_feature_prob": model_args.mask_feature_prob,
"mask_feature_length": model_args.mask_feature_length,
"gradient_checkpointing": training_args.gradient_checkpointing,
"layerdrop": model_args.layerdrop,
"ctc_loss_reduction": model_args.ctc_loss_reduction,
"pad_token_id": tokenizer.pad_token_id,
"vocab_size": len(tokenizer),
"activation_dropout": model_args.activation_dropout,
}
)
# create model
model = AutoModelForCTC.from_pretrained(
model_args.model_name_or_path,
cache_dir=model_args.cache_dir,
config=config,
use_auth_token=data_args.use_auth_token,
)
# freeze encoder
if model_args.freeze_feature_encoder:
model.freeze_feature_encoder()
# 6. Now we preprocess the datasets including loading the audio, resampling and normalization
# Thankfully, `datasets` takes care of automatically loading and resampling the audio,
# so that we just need to set the correct target sampling rate and normalize the input
# via the `feature_extractor`
# make sure that dataset decodes audio with correct sampling rate
dataset_sampling_rate = next(iter(raw_datasets.values())).features[data_args.audio_column_name].sampling_rate
if dataset_sampling_rate != feature_extractor.sampling_rate:
raw_datasets = raw_datasets.cast_column(
data_args.audio_column_name, datasets.features.Audio(sampling_rate=feature_extractor.sampling_rate)
)
# derive max & min input length for sample rate & max duration
max_input_length = data_args.max_duration_in_seconds * feature_extractor.sampling_rate
min_input_length = data_args.min_duration_in_seconds * feature_extractor.sampling_rate
audio_column_name = data_args.audio_column_name
num_workers = data_args.preprocessing_num_workers
# `phoneme_language` is only relevant if the model is fine-tuned on phoneme classification
phoneme_language = data_args.phoneme_language
# Preprocessing the datasets.
# We need to read the audio files as arrays and tokenize the targets.
def prepare_dataset(batch):
# load audio
sample = batch[audio_column_name]
inputs = feature_extractor(sample["array"], sampling_rate=sample["sampling_rate"])
batch["input_values"] = inputs.input_values[0]
batch["input_length"] = len(batch["input_values"])
# encode targets
additional_kwargs = {}
if phoneme_language is not None:
additional_kwargs["phonemizer_lang"] = phoneme_language
batch["labels"] = tokenizer(batch["target_text"], **additional_kwargs).input_ids
return batch
with training_args.main_process_first(desc="dataset map preprocessing"):
vectorized_datasets = raw_datasets.map(
prepare_dataset,
remove_columns=next(iter(raw_datasets.values())).column_names,
num_proc=num_workers,
desc="preprocess datasets",
)
def is_audio_in_length_range(length):
return length > min_input_length and length < max_input_length
# filter data that is shorter than min_input_length
vectorized_datasets = vectorized_datasets.filter(
is_audio_in_length_range,
num_proc=num_workers,
input_columns=["input_length"],
)
# 7. Next, we can prepare the training.
# Let's use word error rate (WER) as our evaluation metric,
# instantiate a data collator and the trainer
# Define evaluation metrics during training, *i.e.* word error rate, character error rate
eval_metrics = {metric: load_metric(metric) for metric in data_args.eval_metrics}
# for large datasets it is advised to run the preprocessing on a
# single machine first with ``args.preprocessing_only`` since there will mostly likely
# be a timeout when running the script in distributed mode.
# In a second step ``args.preprocessing_only`` can then be set to `False` to load the
# cached dataset
if data_args.preprocessing_only:
logger.info(f"Data preprocessing finished. Files cached at {vectorized_datasets.cache_files}")
return
def compute_metrics(pred):
pred_logits = pred.predictions
pred_ids = np.argmax(pred_logits, axis=-1)
pred.label_ids[pred.label_ids == -100] = tokenizer.pad_token_id
pred_str = tokenizer.batch_decode(pred_ids)
# we do not want to group tokens when computing the metrics
label_str = tokenizer.batch_decode(pred.label_ids, group_tokens=False)
metrics = {k: v.compute(predictions=pred_str, references=label_str) for k, v in eval_metrics.items()}
return metrics
# Now save everything to be able to create a single processor later
if is_main_process(training_args.local_rank):
# save feature extractor, tokenizer and config
feature_extractor.save_pretrained(training_args.output_dir)
tokenizer.save_pretrained(training_args.output_dir)
config.save_pretrained(training_args.output_dir)
try:
processor = AutoProcessor.from_pretrained(training_args.output_dir)
except (OSError, KeyError):
warnings.warn(
"Loading a processor from a feature extractor config that does not"
" include a `processor_class` attribute is deprecated and will be removed in v5. Please add the following "
" attribute to your `preprocessor_config.json` file to suppress this warning: "
" `'processor_class': 'Wav2Vec2Processor'`",
FutureWarning,
)
processor = Wav2Vec2Processor.from_pretrained(training_args.output_dir)
# Instantiate custom data collator
data_collator = DataCollatorCTCWithPadding(processor=processor)
# Initialize Trainer
trainer = Trainer(
model=model,
data_collator=data_collator,
args=training_args,
compute_metrics=compute_metrics,
train_dataset=vectorized_datasets["train"] if training_args.do_train else None,
eval_dataset=vectorized_datasets["eval"] if training_args.do_eval else None,
tokenizer=feature_extractor,
)
# 8. Finally, we can start training
# Training
if training_args.do_train:
# use last checkpoint if exist
if last_checkpoint is not None:
checkpoint = last_checkpoint
elif os.path.isdir(model_args.model_name_or_path):
checkpoint = model_args.model_name_or_path
else:
checkpoint = None
train_result = trainer.train(resume_from_checkpoint=checkpoint)
trainer.save_model()
metrics = train_result.metrics
max_train_samples = (
data_args.max_train_samples
if data_args.max_train_samples is not None
else len(vectorized_datasets["train"])
)
metrics["train_samples"] = min(max_train_samples, len(vectorized_datasets["train"]))
trainer.log_metrics("train", metrics)
trainer.save_metrics("train", metrics)
trainer.save_state()
# Evaluation
results = {}
if training_args.do_eval:
logger.info("*** Evaluate ***")
metrics = trainer.evaluate()
max_eval_samples = (
data_args.max_eval_samples if data_args.max_eval_samples is not None else len(vectorized_datasets["eval"])
)
metrics["eval_samples"] = min(max_eval_samples, len(vectorized_datasets["eval"]))
trainer.log_metrics("eval", metrics)
trainer.save_metrics("eval", metrics)
# Write model card and (optionally) push to hub
config_name = data_args.dataset_config_name if data_args.dataset_config_name is not None else "na"
kwargs = {
"finetuned_from": model_args.model_name_or_path,
"tasks": "speech-recognition",
"tags": ["automatic-speech-recognition", data_args.dataset_name],
"dataset_args": f"Config: {config_name}, Training split: {data_args.train_split_name}, Eval split: {data_args.eval_split_name}",
"dataset": f"{data_args.dataset_name.upper()} - {config_name.upper()}",
}
if "common_voice" in data_args.dataset_name:
kwargs["language"] = config_name
if training_args.push_to_hub:
trainer.push_to_hub(**kwargs)
else:
trainer.create_model_card(**kwargs)
return results
if __name__ == "__main__":
main()
| 30,371 | 40.098782 | 158 | py |
robust-transformers | robust-transformers-main/examples/pytorch/slice-discovery/generate_features.py | #!/usr/bin/env python
# coding=utf-8
"""
Code to create feature representations for instances of a text classification task, for automatic spurious-feature slice-discovery.
Supported Feature types:
Given a model path (pretrained or finetuned), return
* CLS
* Maxpool representations
Given two model representations (pretrained and finetunde, both), return:
* Difference in CLS representations.
"""
from copyreg import pickle
from fileinput import filename
import logging
import os
import random
import sys
from dataclasses import dataclass, field
from typing import Optional
import tqdm
import pickle
import datasets
import numpy as np
from datasets import load_dataset, load_metric
import meerkat as mk
import pandas as pd
import json
import torch
import transformers
from transformers import (
AutoConfig,
AutoModelForSequenceClassification,
AutoTokenizer,
CartographyDataCollatorWithPadding,
EvalPrediction,
HfArgumentParser,
PretrainedConfig,
TrainerDro,
TrainingArguments,
DroArguments,
cartography_data_collator,
set_seed,
)
from transformers.trainer_utils import get_last_checkpoint
from transformers.trainer_pt_utils import nested_numpify, nested_detach
from transformers.utils import check_min_version
from transformers.utils.versions import require_version
from domino_slicer import DominoMixture, DominoSlicer
logger = logging.getLogger(__name__)
task_to_keys = {
"cola": ("sentence", None),
"mnli": ("premise", "hypothesis"),
"mrpc": ("sentence1", "sentence2"),
"qnli": ("question", "sentence"),
"qqp": ("sentence1", "sentence2"),
"rte": ("sentence1", "sentence2"),
"sst2": ("sentence", None),
"stsb": ("sentence1", "sentence2"),
"wanli": ("premise", "hypothesis"),
}
custom_task_to_keys = {
"mnli_resplit": ("sentence1", "sentence2"),
"wilds_civil_comments": ("sentence1", None),
"winogrande": ("sentence", None),
"sst2": ("sentence", None),
"fever": ("sentence1", "sentence2"),
"commonsenseqa": ("sentence1", "sentence2"),
"wanli": ("premise", "hypothesis"),
"qqp": ("question1", "question2"),
}
@dataclass
class DataTrainingArguments:
"""
Arguments pertaining to what data we are going to input our model for training and eval.
Using `HfArgumentParser` we can turn this class
into argparse arguments to be able to specify them on
the command line.
"""
task_name: Optional[str] = field(
default=None,
metadata={"help": "The name of the task to train on: " + ", ".join(task_to_keys.keys())},
)
custom_task_name: Optional[str] = field(
default="mnli_resplit",
metadata={"help": "The name of the task to train on: " + ", ".join(task_to_keys.keys())},
)
dataset_name: Optional[str] = field(
default=None, metadata={"help": "The name of the dataset to use (via the datasets library)."}
)
dataset_config_name: Optional[str] = field(
default=None, metadata={"help": "The configuration name of the dataset to use (via the datasets library)."}
)
cluster_assgn_file: str = field(
default=None,
metadata={"help": "Path to error-aware cluster assignment file."}
)
output_file: str = field(
default=None,
metadata={"help": "output file to store newly re-grouped data."}
)
max_seq_length: int = field(
default=128,
metadata={
"help": "The maximum total input sequence length after tokenization. Sequences longer "
"than this will be truncated, sequences shorter will be padded."
},
)
overwrite_cache: bool = field(
default=False, metadata={"help": "Overwrite the cached preprocessed datasets or not."}
)
pad_to_max_length: bool = field(
default=True,
metadata={
"help": "Whether to pad all samples to `max_seq_length`. "
"If False, will pad the samples dynamically when batching to the maximum length in the batch."
},
)
max_train_samples: Optional[int] = field(
default=None,
metadata={
"help": "For debugging purposes or quicker training, truncate the number of training examples to this "
"value if set."
},
)
max_eval_samples: Optional[int] = field(
default=None,
metadata={
"help": "For debugging purposes or quicker training, truncate the number of evaluation examples to this "
"value if set."
},
)
max_predict_samples: Optional[int] = field(
default=None,
metadata={
"help": "For debugging purposes or quicker training, truncate the number of prediction examples to this "
"value if set."
},
)
train_file: Optional[str] = field(
default=None, metadata={"help": "A csv or a json file containing the training data."}
)
validation_file: Optional[str] = field(
default=None, metadata={"help": "A csv or a json file containing the validation data."}
)
test_file: Optional[str] = field(default=None, metadata={"help": "A csv or a json file containing the test data."})
create_features: Optional[bool] = field(
default=False, metadata={"help": "Create training and evaluation data features."}
)
cluster_dev_features: Optional[bool] = field(
default=False, metadata={"help": "Cluster training and evaluation data features."}
)
cluster_train_features: Optional[bool] = field(
default=False, metadata={"help": "Cluster training and evaluation data features."}
)
assign_dev_groups: Optional[bool] = field(
default=False, metadata={"help": "Greedily Assign groups based on DOMINO membership."}
)
n_slices: Optional[int] = field(default=10, metadata={"help": "number of error slices to analyze."})
n_mixture_components: Optional[int] = field(default=50, metadata={"help": "number of mixture components."})
init_type: Optional[str] = field(default="confusion", metadata={"help": "Type of initialization for Mixture model."})
include_ypred: Optional[bool] = field(
default=False, metadata={"help": "Included predicted class for train time filtering"}
)
def __post_init__(self):
if self.task_name is not None:
self.task_name = self.task_name.lower()
if self.task_name not in task_to_keys.keys():
raise ValueError("Unknown task, you should pick one in " + ",".join(task_to_keys.keys()))
elif self.dataset_name is not None:
pass
elif self.train_file is None or self.validation_file is None:
raise ValueError("Need either a GLUE task, a training/validation file or a dataset name.")
else:
train_extension = self.train_file.split(".")[-1]
assert train_extension in ["tsv", "csv", "json"], "`train_file` should be a csv or a json file."
validation_extension = self.validation_file.split(".")[-1]
assert (
validation_extension == train_extension
), "`validation_file` should have the same extension (csv or json) as `train_file`."
@dataclass
class ModelArguments:
"""
Arguments pertaining to which model/config/tokenizer we are going to fine-tune from.
"""
model_name_or_path: str = field(
metadata={"help": "Path to pretrained model or model identifier from huggingface.co/models"}
)
config_name: Optional[str] = field(
default=None, metadata={"help": "Pretrained config name or path if not the same as model_name"}
)
tokenizer_name: Optional[str] = field(
default=None, metadata={"help": "Pretrained tokenizer name or path if not the same as model_name"}
)
cache_dir: Optional[str] = field(
default=None,
metadata={"help": "Where do you want to store the pretrained models downloaded from huggingface.co"},
)
use_fast_tokenizer: bool = field(
default=True,
metadata={"help": "Whether to use one of the fast tokenizer (backed by the tokenizers library) or not."},
)
model_revision: str = field(
default="main",
metadata={"help": "The specific model version to use (can be a branch name, tag name or commit id)."},
)
use_auth_token: bool = field(
default=False,
metadata={
"help": "Will use the token generated when running `transformers-cli login` (necessary to use this script "
"with private models)."
},
)
def create_features(training_args, trainer, dataloader, model, config, split):
# eval_datalooader = trainer.g
total_train_batch_size = training_args.train_batch_size * training_args.gradient_accumulation_steps * training_args.world_size
num_examples = len(dataloader) # Number of batches.
logger.info("***** Running feature generation for training dataset *****")
logger.info(f" Num examples = {num_examples}")
logger.info(f" Instantaneous batch size per device = {training_args.per_device_train_batch_size}")
logger.info(f" Total train batch size (w. parallel, distributed & accumulation) = {total_train_batch_size}")
train_representations = np.array([], dtype='float32').reshape(0,model.config.hidden_size)
train_logits = np.array([], dtype='float32').reshape(0, config.num_labels)
train_labels = np.array([], dtype='float32').reshape(0)
train_guids = []
train_groups = np.array([], dtype='float32').reshape(0)
## creat a meerkat table.
for step, inputs in tqdm.tqdm(enumerate(dataloader)):
inputs = trainer._prepare_inputs(inputs)
with torch.no_grad():
with trainer.autocast_smart_context_manager():
#TODO: Remove non-tensorizable elements from inputs.
guid = inputs["guid"]
group = inputs["group"]
labels = inputs["labels"]
train_guids += guid
train_labels = np.concatenate((train_labels, nested_numpify(labels)), axis=0)
train_groups = np.concatenate((train_groups, nested_numpify(group)), axis=0)
del inputs["guid"]
del inputs["group"]
if "group_distribution" in inputs:
del inputs["group_distribution"]
inputs["output_hidden_states"] = True
outputs = model(**inputs)
last_hidden_layer = outputs["hidden_states"][-1]
classifier_representations = last_hidden_layer[:,0,:]
train_representations = np.concatenate((train_representations, nested_numpify(classifier_representations)), axis=0)
logits = outputs[1]
train_logits = np.concatenate((train_logits, nested_numpify(logits)), axis=0)
# Record predicted class as well.
"""
Meerkat DataPanel <https://github.com/robustness-gym/meerkat>`_ with columns
"emb", "target", and "pred_probs". After loading the DataPanel, you can discover
underperforming slices of the validation dataset with the following:
"""
dp = mk.DataPanel({
'guid': train_guids,
'group': train_groups,
'emb': train_representations,
'target': train_labels,
'pred_probs': train_logits
})
pd_df = mk.DataPanel.to_pandas(dp)
clustering_cache = os.path.join(training_args.output_dir, "clustering")
if not os.path.exists(clustering_cache):
os.mkdir(clustering_cache)
pd_df.to_pickle(os.path.join(training_args.output_dir, "clustering", "{0}.pkl".format(split)))
def main():
parser = HfArgumentParser((ModelArguments, DataTrainingArguments, TrainingArguments, DroArguments))
model_args, data_args, training_args, dro_args = parser.parse_args_into_dataclasses()
# Setup logging
logging.basicConfig(
format="%(asctime)s - %(levelname)s - %(name)s - %(message)s",
datefmt="%m/%d/%Y %H:%M:%S",
handlers=[logging.StreamHandler(sys.stdout)],
)
log_level = training_args.get_process_log_level()
logger.setLevel(log_level)
datasets.utils.logging.set_verbosity(log_level)
transformers.utils.logging.set_verbosity(log_level)
transformers.utils.logging.enable_default_handler()
transformers.utils.logging.enable_explicit_format()
# Log on each process the small summary:
logger.warning(
f"Process rank: {training_args.local_rank}, device: {training_args.device}, n_gpu: {training_args.n_gpu}"
+ f"distributed training: {bool(training_args.local_rank != -1)}, 16-bits training: {training_args.fp16}"
)
logger.info(f"Training/evaluation parameters {training_args}")
# Set seed before initializing model.
set_seed(training_args.seed)
# Load tarining, validation and test data from file paths.
data_files = {"train": data_args.train_file, "validation": data_args.validation_file, "test": data_args.test_file}
if data_args.train_file.endswith(".csv"):
# Loading a dataset from local csv files
raw_datasets = load_dataset("csv", data_files=data_files, cache_dir=model_args.cache_dir)
else:
# Loading a dataset from local json files
raw_datasets = load_dataset("json", data_files=data_files, cache_dir=model_args.cache_dir)
# Labels
is_regression = raw_datasets["train"].features["label"].dtype in ["float32", "float64"]
if is_regression:
num_labels = 1
else:
# A useful fast method:
# https://huggingface.co/docs/datasets/package_reference/main_classes.html#datasets.Dataset.unique
label_list = raw_datasets["train"].unique("label")
label_list.sort() # Let's sort it for determinism
num_labels = len(label_list)
# Load pretrained model and tokenizer
#
# In distributed training, the .from_pretrained methods guarantee that only one local process can concurrently
# download model & vocab.
config = AutoConfig.from_pretrained(
model_args.config_name if model_args.config_name else model_args.model_name_or_path,
num_labels=num_labels,
finetuning_task=data_args.task_name,
cache_dir=model_args.cache_dir,
revision=model_args.model_revision,
use_auth_token=True if model_args.use_auth_token else None,
)
tokenizer = AutoTokenizer.from_pretrained(
model_args.tokenizer_name if model_args.tokenizer_name else model_args.model_name_or_path,
cache_dir=model_args.cache_dir,
use_fast=model_args.use_fast_tokenizer,
revision=model_args.model_revision,
use_auth_token=True if model_args.use_auth_token else None,
)
model = AutoModelForSequenceClassification.from_pretrained(
model_args.model_name_or_path,
from_tf=bool(".ckpt" in model_args.model_name_or_path),
config=config,
cache_dir=model_args.cache_dir,
revision=model_args.model_revision,
use_auth_token=True if model_args.use_auth_token else None,
)
# Preprocessing the raw_datasets
# TODO:For amazon, sentence1_key is fixed as "text"
# sentence1_key, sentence2_key = "text", None
# Custom MNLI with group info
sentence1_key, sentence2_key = custom_task_to_keys[data_args.custom_task_name]
# Padding strategy
if data_args.pad_to_max_length:
padding = "max_length"
else:
# We will pad later, dynamically at batch creation, to the max sequence length in each batch
padding = False
# Handling Label to ID mapping
label_to_id = {v: i for i, v in enumerate(label_list)}
model.config.label2id = label_to_id
model.config.id2label = {id: label for label, id in config.label2id.items()}
# Max sequence length
if data_args.max_seq_length > tokenizer.model_max_length:
logger.warning(
f"The max_seq_length passed ({data_args.max_seq_length}) is larger than the maximum length for the"
f"model ({tokenizer.model_max_length}). Using max_seq_length={tokenizer.model_max_length}."
)
max_seq_length = min(data_args.max_seq_length, tokenizer.model_max_length)
def preprocess_function(examples):
# Tokenize the texts
args = (
(examples[sentence1_key],) if sentence2_key is None else (examples[sentence1_key], examples[sentence2_key])
)
result = tokenizer(*args, padding=padding, max_length=max_seq_length, truncation=True)
# Map labels to IDs (not necessary for GLUE tasks)
if label_to_id is not None and "label" in examples:
result["label"] = [(label_to_id[l] if l != -1 else -1) for l in examples["label"]]
result["guid"] = examples["guid"]
result["group"] = examples["group"]
return result
# Preprocess datasets.
if data_args.create_features:
with training_args.main_process_first(desc="dataset map pre-processing"):
raw_datasets = raw_datasets.map(
preprocess_function,
batched=True,
load_from_cache_file=not data_args.overwrite_cache,
desc="Running tokenizer on dataset",
)
train_dataset = raw_datasets["train"]
if data_args.max_train_samples is not None:
train_dataset = train_dataset.select(range(data_args.max_train_samples))
eval_dataset = raw_datasets["validation_matched" if data_args.task_name == "mnli" else "validation"]
if data_args.max_eval_samples is not None:
eval_dataset = eval_dataset.select(range(data_args.max_eval_samples))
predict_dataset = raw_datasets["test_matched" if data_args.task_name == "mnli" else "test"]
if data_args.max_predict_samples is not None:
predict_dataset = predict_dataset.select(range(data_args.max_predict_samples))
# Data collator.
if data_args.pad_to_max_length:
data_collator = cartography_data_collator
elif training_args.fp16:
data_collator = CartographyDataCollatorWithPadding(tokenizer, pad_to_multiple_of=8)
else:
data_collator = None
# Metrics?
metric = load_metric("accuracy")
# You can define your custom compute_metrics function. It takes an `EvalPrediction` object (a namedtuple with a
# predictions and label_ids field) and has to return a dictionary string to float.
def compute_metrics(p: EvalPrediction):
preds = p.predictions[0] if isinstance(p.predictions, tuple) else p.predictions
preds = np.squeeze(preds) if is_regression else np.argmax(preds, axis=1)
if data_args.task_name is not None:
result = metric.compute(predictions=preds, references=p.label_ids)
if len(result) > 1:
result["combined_score"] = np.mean(list(result.values())).item()
return result
elif is_regression:
return {"mse": ((preds - p.label_ids) ** 2).mean().item()}
else:
return {"accuracy": (preds == p.label_ids).astype(np.float32).mean().item()}
# Look at trainer init and init a trainer even here: easiest if initialized?
# Initialize our Trainer
if data_args.create_features:
trainer = TrainerDro(
model=model,
args=training_args,
dro_args=dro_args,
train_dataset=train_dataset,
eval_dataset=eval_dataset,
compute_metrics=compute_metrics,
tokenizer=tokenizer,
data_collator=data_collator,
)
train_dataloader = trainer.get_train_dataloader()
create_features(training_args, trainer, train_dataloader, model, config, "train")
eval_dataloader = trainer.get_eval_dataloader(eval_dataset)
create_features(training_args, trainer, eval_dataloader, model, config, split="dev")
if data_args.cluster_dev_features:
#label_to_id = {"entailment":0, "neutral":1, "contradiction":2} (already defined, reuse for consistency)
id_to_label = {v:k for k,v in label_to_id.items()}
# load features
split = "dev"
logger.info("***** Loading features for {0} dataset *****".format(split))
pd_df = pd.read_pickle(os.path.join(training_args.output_dir, "clustering", "{0}.pkl".format(split)))
logits = np.stack(pd_df["pred_probs"].to_numpy())
dp = mk.DataPanel({
'guid': pd_df["guid"].to_list(),
'group': np.stack(pd_df["group"].to_numpy()),
'emb': np.stack(pd_df["emb"].to_numpy()),
'target': np.stack(pd_df["target"].to_numpy()),
'pred_probs': np.asarray(torch.softmax(torch.tensor(logits), dim=-1))
})
domino = DominoSlicer(n_slices=data_args.n_slices, n_mixture_components=data_args.n_mixture_components, init_params=data_args.init_type, max_iter=200)
domino.fit(
data=dp, embeddings="emb", targets="target", pred_probs="pred_probs"
)
# Save the domino class as a pickle
pickle.dump(domino, open(os.path.join(training_args.output_dir, "clustering", "{0}_dominoclass_{1}_slices.pkl".format(split, data_args.n_slices)), "wb"))
dp["domino_slices"] = domino.transform(
data=dp, embeddings="emb", targets="target", pred_probs="pred_probs"
)
# Save the domino object so that it be used to draw comparisons.
pd_df = mk.DataPanel.to_pandas(dp)
logger.info("***** Dumping group assingments for {0} to file *****".format(split))
pd_df.to_pickle(os.path.join(training_args.output_dir, "clustering", "{0}_output_{1}_slices.pkl".format(split, data_args.n_slices)))
logger.info("***** Dumping groups for exploration for {0} to file *****".format(split))
data_dict = {}
slices_dict = {i:[] for i in range(-1, data_args.n_slices)}
if split == "dev":
for ex in raw_datasets["validation"]:
data_dict[ex["guid"]] = ex
elif split == "train":
for ex in raw_datasets["train"]:
data_dict[ex["guid"]] = ex
for i in range(len(pd_df)):
## Usually analysis is done with group assignment only if value is above a threshold.
slice = int(np.argmax(pd_df.iloc[i]["domino_slices"]))
slice_val = np.max(pd_df.iloc[i]["domino_slices"])
if slice_val > 0.90:
chosen_slice = slice
else:
chosen_slice = -1
guid = pd_df.iloc[i]["guid"]
ex = data_dict[guid]
ex["prediction"] = id_to_label[np.argmax(pd_df.iloc[i]["pred_probs"])]
# Only look at slices that are actually erroneous
# if not np.argmax(pd_df.iloc[i]["pred_probs"]) == pd_df.iloc[i]["target"]:
slices_dict[chosen_slice].append(ex)
with open(os.path.join(training_args.output_dir, "clustering", "{0}_analysis_{1}_slices.json".format(split, data_args.n_slices)), "w") as fout:
# ignore all examples that were assigned slice -1
for i in range(data_args.n_slices):
# fout.write("Slice {0}\n".format(i))
for j, ex in enumerate(slices_dict[i]):
if data_args.custom_task_name == "mnli_resplit":
new_ex = {"slice": i, "premise": ex["sentence1"], "hypothesis": ex["sentence2"], "label": ex["label"], "predicted": ex["prediction"], "guid": ex["guid"]}
# if data_args.custom_task_name == "mnli_resplit":
# fout.write(str(j+1) + "\nPremise:" + ex["sentence1"] + "\nHypothesis:" + ex["sentence2"] + "\nGold:" + ex["label"] + "\nPrediction:" + ex["prediction"] + "\n")
# elif data_args.custom_task_name == "wanli":
# fout.write(str(j+1) + "\nPremise:" + ex["premise"] + "\nHypothesis:" + ex["hypothesis"] + "\nGold:" + ex["label"] + "\nPrediction:" + ex["prediction"] + "\n")
# elif data_args.custom_task_name == "wilds_civil_comments":
# fout.write(str(j+1) + "\Comment:" + ex["sentence1"] + "\nGold:" + ex["label"] + "\nPrediction:" + ex["prediction"] + "\n")
# elif data_args.custom_task_name == "commonsenseqa":
# fout.write(str(j+1) + "\n" + ex["sentence1"] + "\n" + ex["sentence2"] + "\nGold:" + str(ex["label"]) + "\nPrediction:" + str(ex["prediction"]) + "\n")
# elif data_args.custom_task_name == "sst2":
# fout.write(str(j+1) + "\nReview:" + ex["sentence"] + "\nGold:" + str(ex["label"]) + "\nPrediction:" + str(ex["prediction"]) + "\n")
# elif data_args.custom_task_name == "qqp":
# fout.write(str(j+1) + "\nQuestion1:" + ex["question1"] + "\nQuestion2:" + ex["question2"] + "\nGold:" + str(ex["label"]) + "\nPrediction:" + str(ex["prediction"]) + "\n")
fout.write(json.dumps(new_ex) + "\n")
for i in range(-1, data_args.n_slices):
print(len(slices_dict[i]))
# repeat grouping on train set (for G-DRO)
'''
split = "train"
logger.info("***** Loading features for {0} dataset *****".format(split))
pd_df = pd.read_pickle(os.path.join(training_args.output_dir, "clustering", "{0}.pkl".format(split)))
logits = np.stack(pd_df["pred_probs"].to_numpy())
dp = mk.DataPanel({
'guid': pd_df["guid"].to_list(),
'group': np.stack(pd_df["group"].to_numpy()),
'emb': np.stack(pd_df["emb"].to_numpy()),
'target': np.stack(pd_df["target"].to_numpy()),
'pred_probs': np.asarray(torch.softmax(torch.tensor(logits), dim=-1))
})
dp["domino_slices"] = domino.transform(
data=dp, embeddings="emb", targets="target", pred_probs="pred_probs"
)
pd_df = mk.DataPanel.to_pandas(dp)
logger.info("***** Dumping group assingments for {0} to file *****".format(split))
pd_df.to_pickle(os.path.join(training_args.output_dir, "clustering", "{0}_output_{1}_slices.pkl".format(split, data_args.n_slices)))
train_slices = np.stack(pd_df["domino_slices"].to_numpy())
'''
if data_args.assign_dev_groups:
pd_df = pd.read_pickle(data_args.cluster_assgn_file)
slices = np.stack(pd_df["domino_slices"].to_numpy())
# greedily assign the slice with highest probability.
group_assignment = {}
group_distributions = {}
for i in range(len(pd_df)):
## Usually analysis is done with group assignment only if value is above a threshold.
slice = int(np.argmax(pd_df.iloc[i]["domino_slices"]))
slice_val = np.max(pd_df.iloc[i]["domino_slices"])
chosen_slice = slice
guid = pd_df.iloc[i]["guid"]
group_distributions[guid] = list(pd_df.iloc[i]["domino_slices"])
group_assignment[guid] = chosen_slice
dataset = [json.loads(line) for line in open(data_args.validation_file)]
split_by_label = False
with open(data_args.output_file, "w") as fout:
for ex in dataset:
guid = ex["guid"]
new_ex = ex
if split_by_label:
new_ex["group"] = 3*((group_assignment[guid])) + label_to_id[ex["label"]]
else:
new_ex["group"] = group_assignment[guid]
new_ex["group_distribution"] = group_distributions[guid]
fout.write(json.dumps(new_ex) + "\n")
if data_args.cluster_train_features:
id_to_label = {v:k for k,v in label_to_id.items()}
# load features
split = "train"
logger.info("***** Loading features for {0} dataset *****".format(split))
pd_df = pd.read_pickle(os.path.join(training_args.output_dir, "clustering", "{0}.pkl".format(split)))
logits = np.stack(pd_df["pred_probs"].to_numpy())
## Add different toggles
"""
a) Just X
b) X and y_pred
c) X_pre, X and y_pred
"""
if data_args.include_ypred:
dp = mk.DataPanel({
'guid': pd_df["guid"].to_list(),
'group': np.stack(pd_df["group"].to_numpy()),
'emb': np.stack(pd_df["emb"].to_numpy()),
# Remove access to y, y_hat so only X is used for clustering. This is not as different from what was done in Zhou et. al.
# 'target': np.stack(pd_df["target"].to_numpy()),
'pred_probs': np.asarray(torch.softmax(torch.tensor(logits), dim=-1))
})
else:
dp = mk.DataPanel({
'guid': pd_df["guid"].to_list(),
'group': np.stack(pd_df["group"].to_numpy()),
'emb': np.stack(pd_df["emb"].to_numpy()),
# Remove access to y, y_hat so only X is used for clustering. This is not as different from what was done in Zhou et. al.
# 'target': np.stack(pd_df["target"].to_numpy()),
# 'pred_probs': np.asarray(torch.softmax(torch.tensor(logits), dim=-1))
})
domino = DominoSlicer(n_slices=data_args.n_slices, n_mixture_components=data_args.n_mixture_components, init_params=data_args.init_type, max_iter=200)
if data_args.include_ypred:
domino.fit(data=dp, embeddings="emb", targets=None, pred_probs="pred_probs")
dp["domino_slices"] = domino.transform(data=dp, embeddings="emb", targets=None, pred_probs="pred_probs")
else:
domino.fit(data=dp, embeddings="emb", targets=None, pred_probs=None) #, targets="target", pred_probs="pred_probs")
dp["domino_slices"] = domino.transform(data=dp, embeddings="emb", targets=None, pred_probs=None) #, targets="target", pred_probs="pred_probs")
pd_df = mk.DataPanel.to_pandas(dp)
logger.info("***** Dumping group assingments for {0} to file *****".format(split))
if data_args.include_ypred:
prediction_filename = "{0}_output_{1}_slices_Xonly_ypred.pkl".format(split, data_args.n_slices)
else:
prediction_filename = "{0}_output_{1}_slices_Xonly.pkl".format(split, data_args.n_slices)
pd_df.to_pickle(os.path.join(training_args.output_dir, "clustering", prediction_filename))
logger.info("***** Dumping groups for exploration for {0} to file *****".format(split))
data_dict = {}
slices_dict = {i:[] for i in range(-1, data_args.n_slices)}
for ex in raw_datasets["train"]:
data_dict[ex["guid"]] = ex
for i in range(len(pd_df)):
## Usually analysis is done with group assignment only if value is above a threshold.
slice = int(np.argmax(pd_df.iloc[i]["domino_slices"]))
slice_val = np.max(pd_df.iloc[i]["domino_slices"])
if slice_val > 0.90:
chosen_slice = slice
else:
chosen_slice = -1
guid = pd_df.iloc[i]["guid"]
ex = data_dict[guid]
# ex["prediction"] = id_to_label[np.argmax(pd_df.iloc[i]["pred_probs"])]
# Only look at slices that are actually erroneous
#if not np.argmax(pd_df.iloc[i]["pred_probs"]) == pd_df.iloc[i]["target"]:
slices_dict[chosen_slice].append(ex)
with open(os.path.join(training_args.output_dir, "clustering", "{0}_analysis_{1}_slices.txt".format(split, data_args.n_slices)), "w") as fout:
# ignore all examples that were assigned slice -1
for i in range(data_args.n_slices):
fout.write("Slice {0}\n".format(i))
for j, ex in enumerate(slices_dict[i]):
if data_args.custom_task_name == "mnli_resplit":
fout.write(str(j+1) + "\nPremise:" + ex["sentence1"] + "\nHypothesis:" + ex["sentence2"] + "\nGold:" + ex["label"] + "\n")
else:
fout.write(str(j+1) + "\Comment:" + ex["sentence1"] + "\nGold:" + ex["label"] + "\n")
fout.write("\n\n\n")
for i in range(-1, data_args.n_slices):
print(len(slices_dict[i]))
# Run feature generation loop over validation data
# Run feature generation loop over testing data
# Convert features int meerkat format, then apply DOMINO slicer.
if __name__ == "__main__":
main() | 32,462 | 46.047826 | 197 | py |
robust-transformers | robust-transformers-main/examples/pytorch/slice-discovery/custom_slicer.py | from __future__ import annotations
import warnings
from functools import wraps
from typing import Union
import meerkat as mk
import numpy as np
import sklearn.cluster as cluster
from scipy import linalg
from scipy.special import logsumexp
from sklearn.decomposition import PCA
from sklearn.exceptions import ConvergenceWarning
from sklearn.mixture import GaussianMixture
from sklearn.mixture._base import _check_X, check_random_state
from sklearn.mixture._gaussian_mixture import (
_compute_precision_cholesky,
_estimate_gaussian_covariances_diag,
_estimate_gaussian_covariances_full,
_estimate_gaussian_covariances_spherical,
_estimate_gaussian_covariances_tied,
)
from sklearn.preprocessing import label_binarize
from sklearn.utils.validation import check_is_fitted
from tqdm.auto import tqdm
from abc import ABC, abstractmethod
from dataclasses import dataclass
import torch.nn as nn
from utils import unpack_args
class Slicer(ABC):
@dataclass
class Config:
pass
RESOURCES_REQUIRED = {"cpu": 1, "custom_resources": {"ram_gb": 4}}
def __init__(self, n_slices: int):
self.config = self.Config()
self.config.n_slices = n_slices
@abstractmethod
def fit(
self,
model: nn.Module = None,
data_dp: mk.DataPanel = None,
) -> Slicer:
raise NotImplementedError()
@abstractmethod
def transform(self, data_dp: mk.DataPanel) -> mk.DataPanel:
raise NotImplementedError()
class DominoSlicer(Slicer):
r"""
Slice Discovery based on the Domino Mixture Model.
Discover slices by jointly modeling a mixture of input embeddings (e.g. activations
from a trained model), class labels, and model predictions. This encourages slices
that are homogeneous with respect to error type (e.g. all false positives).
Examples
--------
Suppose you've trained a model and stored its predictions on a dataset in
a `Meerkat DataPanel <https://github.com/robustness-gym/meerkat>`_ with columns
"emb", "target", and "pred_probs". After loading the DataPanel, you can discover
underperforming slices of the validation dataset with the following:
.. code-block:: python
from domino import DominoSlicer
dp = ... # Load dataset into a Meerkat DataPanel
# split dataset
valid_dp = dp.lz[dp["split"] == "valid"]
test_dp = dp.lz[dp["split"] == "test"]
domino = DominoSlicer()
domino.fit(
data=valid_dp, embeddings="emb", targets="target", pred_probs="pred_probs"
)
dp["domino_slices"] = domino.transform(
data=test_dp, embeddings="emb", targets="target", pred_probs="pred_probs"
)
Args:
n_slices (int, optional): The number of slices to discover.
Defaults to 5.
covariance_type (str, optional): The type of covariance parameter
:math:`\mathbf{\Sigma}` to use. Same as in sklearn.mixture.GaussianMixture.
Defaults to "diag", which is recommended.
n_pca_components (Union[int, None], optional): The number of PCA components
to use. If ``None``, then no PCA is performed. Defaults to 128.
n_mixture_components (int, optional): The number of clusters in the mixture
model, :math:`\bar{k}`. This differs from ``n_slices`` in that the
``DominoSDM`` only returns the top ``n_slices`` with the highest error rate
of the ``n_mixture_components``. Defaults to 25.
y_log_likelihood_weight (float, optional): The weight :math:`\gamma` applied to
the :math:`P(Y=y_{i} | S=s)` term in the log likelihood during the E-step.
Defaults to 1.
y_hat_log_likelihood_weight (float, optional): The weight :math:`\hat{\gamma}`
applied to the :math:`P(\hat{Y} = h_\theta(x_i) | S=s)` term in the log
likelihood during the E-step. Defaults to 1.
max_iter (int, optional): The maximum number of iterations to run. Defaults
to 100.
init_params (str, optional): The initialization method to use. Options are
the same as in sklearn.mixture.GaussianMixture plus one addition,
"confusion". If "confusion", the clusters are initialized such that almost
all of the examples in a cluster come from same cell in the confusion
matrix. See Notes below for more details. Defaults to "confusion".
confusion_noise (float, optional): Only used if ``init_params="confusion"``.
The scale of noise added to the confusion matrix initialization. See notes
below for more details.
Defaults to 0.001.
Notes
-----
The mixture model is an extension of a standard Gaussian Mixture Model. The model is
based on the assumption that data is generated according to the following generative
process.
* Each example belongs to one of :math:`\bar{k}` slices. This slice
:math:`S` is sampled from a categorical
distribution :math:`S \sim Cat(\mathbf{p}_S)` with parameter :math:`\mathbf{p}_S
\in\{\mathbf{p} \in \mathbb{R}_+^{\bar{k}} : \sum_{i = 1}^{\bar{k}} p_i = 1\}`
(see ``DominoSDM.mm.weights_``).
* Given the slice :math:`S'`, the embeddings are normally distributed
:math:`Z | S \sim \mathcal{N}(\mathbf{\mu}, \mathbf{\Sigma}`) with parameters
mean :math:`\mathbf{\mu} \in \mathbb{R}^d` (see ``DominoSDM.mm.means_``) and
:math:`\mathbf{\Sigma} \in \mathbb{S}^{d}_{++}`
(see ``DominoSDM.mm.covariances_``;
normally this parameter is constrained to the set of symmetric positive definite
:math:`d \\times d` matrices, however the argument ``covariance_type`` allows for
other constraints).
* Given the slice, the labels vary as a categorical
:math:`Y |S \sim Cat(\mathbf{p})` with parameter :math:`\mathbf{p}
\in \{\mathbf{p} \in \mathbb{R}^c_+ : \sum_{i = 1}^c p_i = 1\}` (see
``DominoSDM.mm.y_probs``).
* Given the slice, the model predictions also vary as a categorical
:math:`\hat{Y} | S \sim Cat(\mathbf{\hat{p}})` with parameter
:math:`\mathbf{\hat{p}} \in \{\mathbf{\hat{p}} \in \mathbb{R}^c_+ :
\sum_{i = 1}^c \hat{p}_i = 1\}` (see ``DominoSDM.mm.y_hat_probs``).
The mixture model is, thus, parameterized by :math:`\phi = [\mathbf{p}_S, \mu,
\Sigma, \mathbf{p}, \mathbf{\hat{p}}]` corresponding to the attributes
``weights_, means_, covariances_, y_probs, y_hat_probs`` respectively. The
log-likelihood over the :math:`n` examples in the validation dataset :math:`D_v` is
given as followsand maximized using expectation-maximization:
.. math::
\ell(\phi) = \sum_{i=1}^n \log \sum_{s=1}^{\hat{k}} P(S=s)P(Z=z_i| S=s)
P( Y=y_i| S=s)P(\hat{Y} = h_\theta(x_i) | S=s)
We include two optional hyperparameters
:math:`\gamma, \hat{\gamma} \in \mathbb{R}_+`
(see ``y_log_liklihood_weight`` and ``y_hat_log_likelihood_weight`` below) that
balance the importance of modeling the class labels and predictions against the
importance of modeling the embedding. The modified log-likelihood over :math:`n`
examples is given as follows:
.. math::
\ell(\phi) = \sum_{i=1}^n \log \sum_{s=1}^{\hat{k}} P(S=s)P(Z=z_i| S=s)
P( Y=y_i| S=s)^\gamma P(\hat{Y} = h_\theta(x_i) | S=s)^{\hat{\gamma}}
.. attention::
Although we model the prediction :math:`\hat{Y}` as a categorical random
variable, in practice predictions are sometimes "soft" (e.g. the output
of a softmax layer is a probability distribution over labels, not a single
label). In these cases, the prediction :math:`\hat{Y}` is technically a
dirichlet random variable (i.e. a distribution over distributions).
However, to keep the implementation simple while still leveraging the extra
information provided by "soft" predictions, we naïvely plug the "soft"
predictions directly into the categorical PMF in the E-step and the update in
the M-step. Specifically, during the E-step, instead of computing the
categorical PMF :math:`P(\hat{Y}=\hat{y_i} | S=s)` we compute
:math:`\sum_{j=1}^c \hat{y_i}(j) P(\hat{Y}=j | S=s)` where :math:`\hat{y_i}(j)`
is the "soft" prediction for class :math:`j` (we can
think of this like we're marginalizing out the uncertainty in the prediction).
During the M-step, we compute a "soft" update for the categorical parameters
:math:`p_j^{(s)} = \sum_{i=1}^n Q(s,i) \hat{y_i}(j)` where :math:`Q(s,i)`
is the "responsibility" of slice :math:`s` towards the data point :math:`i`.
When using ``"confusion"`` initialization, each slice $s^{(j)}$ is assigned a
:math:`y^{(j)}\in \mathcal{Y}` and :math:`\hat{y}^{(j)} \in \mathcal{Y}` (*i.e.*
each slice is assigned a cell in the confusion matrix). This is typically done in a
round-robin fashion so that there are at least
:math:`\floor{\hat{k} / {|\mathcal{Y}|^2}}`
slices assigned to each cell in the confusion matrix. Then, we fill in the initial
responsibility matrix :math:`Q \in \mathbb{R}^{n \times \hat{k}}`, where each cell
:math:`Q_{ij}` corresponds to our model's initial estimate of
:math:`P(S=s^{(j)}|Y=y_i,
\hat{Y}=\hat{y}_i)`. We do this according to
.. math::
\bar{Q}_{ij} \leftarrow
\begin{cases}
1 + \epsilon & y_i=y^{(j)} \land \hat{y}_i = \hat{y}^{(j)} \\
\epsilon & \text{otherwise}
\end{cases}
.. math::
Q_{ij} \leftarrow \frac{\bar{Q}_{ij} } {\sum_{l=1}^{\hat{k}} \bar{Q}_{il}}
where :math:`\epsilon` is random noise which ensures that slices assigned to the
same confusion matrix cell won't have the exact same initialization. We sample
:math:`\epsilon` uniformly from the range ``(0, confusion_noise]``.
"""
def __init__(
self,
n_slices: int = 5,
covariance_type: str = "diag",
n_pca_components: Union[int, None] = 128,
n_mixture_components: int = 25,
y_log_likelihood_weight: float = 1,
y_hat_log_likelihood_weight: float = 1,
max_iter: int = 100,
init_params: str = "confusion",
confusion_noise: float = 1e-3,
):
super().__init__(n_slices=n_slices)
self.config.covariance_type = covariance_type
self.config.n_pca_components = n_pca_components
self.config.n_mixture_components = n_mixture_components
self.config.init_params = init_params
self.config.confusion_noise = confusion_noise
self.config.y_log_likelihood_weight = y_log_likelihood_weight
self.config.y_hat_log_likelihood_weight = y_hat_log_likelihood_weight
self.config.max_iter = max_iter
if self.config.n_pca_components is None:
self.pca = None
else:
self.pca = PCA(n_components=self.config.n_pca_components)
self.mm = DominoMixture(
n_components=self.config.n_mixture_components,
reg_covar=1e-6,
y_log_likelihood_weight=self.config.y_log_likelihood_weight,
y_hat_log_likelihood_weight=self.config.y_hat_log_likelihood_weight,
covariance_type=self.config.covariance_type,
init_params=self.config.init_params,
max_iter=self.config.max_iter,
confusion_noise=self.config.confusion_noise,
)
def fit(
self,
data: Union[dict, mk.DataPanel] = None,
embeddings: Union[str, np.ndarray] = "embedding",
targets: Union[str, np.ndarray] = "target",
pred_probs: Union[str, np.ndarray] = "pred_probs",
) -> DominoSlicer:
"""
Fit the mixture model to data.
Args:
data (mk.DataPanel, optional): A `Meerkat DataPanel` with columns for
embeddings, targets, and prediction probabilities. The names of the
columns can be specified with the ``embeddings``, ``targets``, and
``pred_probs`` arguments. Defaults to None.
embeddings (Union[str, np.ndarray], optional): The name of a colum in
``data`` holding embeddings. If ``data`` is ``None``, then an np.ndarray
of shape (n_samples, dimension of embedding). Defaults to
"embedding".
targets (Union[str, np.ndarray], optional): The name of a column in
``data`` holding class labels. If ``data`` is ``None``, then an
np.ndarray of shape (n_samples,). Defaults to "target".
pred_probs (Union[str, np.ndarray], optional): The name of
a column in ``data`` holding model predictions (can either be "soft"
probability scores or "hard" 1-hot encoded predictions). If
``data`` is ``None``, then an np.ndarray of shape (n_samples, n_classes)
or (n_samples,) in the binary case. Defaults to "pred_probs".
Returns:
DominoSDM: Returns a fit instance of DominoSDM.
"""
embeddings, targets, pred_probs = unpack_args(
data, embeddings, targets, pred_probs
)
# np.stack(np.asarray(embeddings))
if self.pca is not None:
self.pca.fit(X=embeddings)
embeddings = self.pca.transform(X=embeddings)
self.mm.fit(X=embeddings, y=targets, y_hat=pred_probs)
self.slice_cluster_indices = (
-np.abs((self.mm.y_hat_probs - self.mm.y_probs).max(axis=1))
).argsort()[: self.config.n_slices]
return self
def transform(
self,
data: Union[dict, mk.DataPanel] = None,
embeddings: Union[str, np.ndarray] = "embedding",
targets: Union[str, np.ndarray] = "target",
pred_probs: Union[str, np.ndarray] = "pred_probs",
) -> np.ndarray:
"""
Estimate slice membership for data using a fit mixture model.
.. caution::
Must call ``DominoSDM.fit`` prior to calling ``DominoSDM.transform``.
Args:
data (mk.DataPanel, optional): A `Meerkat DataPanel` with columns for
embeddings, targets, and prediction probabilities. The names of the
columns can be specified with the ``embeddings``, ``targets``, and
``pred_probs`` arguments. Defaults to None.
embeddings (Union[str, np.ndarray], optional): The name of a colum in
``data`` holding embeddings. If ``data`` is ``None``, then an np.ndarray
of shape (n_samples, dimension of embedding). Defaults to
"embedding".
targets (Union[str, np.ndarray], optional): The name of a column in
``data`` holding class labels. If ``data`` is ``None``, then an
np.ndarray of shape (n_samples,). Defaults to "target".
pred_probs (Union[str, np.ndarray], optional): The name of
a column in ``data`` holding model predictions (can either be "soft"
probability scores or "hard" 1-hot encoded predictions). If
``data`` is ``None``, then an np.ndarray of shape (n_samples, n_classes)
or (n_samples,) in the binary case. Defaults to "pred_probs".
Returns:
np.ndarray: A ``np.ndarray`` of shape (n_samples, n_slices).
"""
embeddings, targets, pred_probs = unpack_args(
data, embeddings, targets, pred_probs
)
if self.pca is not None:
embeddings = self.pca.transform(X=embeddings)
clusters = self.mm.predict_proba(embeddings, y=targets, y_hat=pred_probs)
return clusters[:, self.slice_cluster_indices]
class DominoMixture(GaussianMixture):
@wraps(GaussianMixture.__init__)
def __init__(
self,
*args,
y_log_likelihood_weight: float = 1,
y_hat_log_likelihood_weight: float = 1,
confusion_noise: float = 1e-3,
**kwargs,
):
self.y_log_likelihood_weight = y_log_likelihood_weight
self.y_hat_log_likelihood_weight = y_hat_log_likelihood_weight
self.confusion_noise = confusion_noise
super().__init__(*args, **kwargs)
def _initialize_parameters(self, X, y, y_hat, random_state):
"""Initialize the model parameters.
Parameters
----------
X : array-like of shape (n_samples, n_features)
random_state : RandomState
A random number generator instance that controls the random seed
used for the method chosen to initialize the parameters.
"""
n_samples, _ = X.shape
if self.init_params == "kmeans":
resp = np.zeros((n_samples, self.n_components))
label = (
cluster.KMeans(
n_clusters=self.n_components, n_init=1, random_state=random_state
)
.fit(X)
.labels_
)
resp[np.arange(n_samples), label] = 1
elif self.init_params == "random":
resp = random_state.rand(n_samples, self.n_components)
resp /= resp.sum(axis=1)[:, np.newaxis]
elif self.init_params == "confusion":
num_classes = y.shape[-1]
if self.n_components < num_classes ** 2:
raise ValueError(
"Can't use parameter init 'error' when "
"`n_components` < `num_classes **2`"
)
resp = np.matmul(y[:, :, np.newaxis], y_hat[:, np.newaxis, :]).reshape(
len(y), -1
)
resp = np.concatenate(
[resp]
* (
int(self.n_components / (num_classes ** 2))
+ (self.n_components % (num_classes ** 2) > 0)
),
axis=1,
)[:, : self.n_components]
resp /= resp.sum(axis=1)[:, np.newaxis]
resp += (
random_state.rand(n_samples, self.n_components) * self.confusion_noise
)
resp /= resp.sum(axis=1)[:, np.newaxis]
else:
raise ValueError(
"Unimplemented initialization method '%s'" % self.init_params
)
self._initialize(X, y, y_hat, resp)
print(self.y_probs[:, 0].sum())
def _initialize(self, X, y, y_hat, resp):
"""Initialization of the Gaussian mixture parameters.
Parameters
----------
X : array-like of shape (n_samples, n_features)
resp : array-like of shape (n_samples, n_components)
"""
n_samples, _ = X.shape
weights, means, covariances, y_probs, y_hat_probs = _estimate_parameters(
X, y, y_hat, resp, self.reg_covar, self.covariance_type
)
weights /= n_samples
self.weights_ = weights if self.weights_init is None else self.weights_init
self.means_ = means if self.means_init is None else self.means_init
self.y_probs, self.y_hat_probs = y_probs, y_hat_probs
if self.precisions_init is None:
self.covariances_ = covariances
self.precisions_cholesky_ = _compute_precision_cholesky(
covariances, self.covariance_type
)
elif self.covariance_type == "full":
self.precisions_cholesky_ = np.array(
[
linalg.cholesky(prec_init, lower=True)
for prec_init in self.precisions_init
]
)
elif self.covariance_type == "tied":
self.precisions_cholesky_ = linalg.cholesky(
self.precisions_init, lower=True
)
else:
self.precisions_cholesky_ = self.precisions_init
def fit(self, X, y, y_hat):
self.fit_predict(X, y, y_hat)
return self
def _preprocess_ys(self, y: np.ndarray = None, y_hat: np.ndarray = None):
if y is not None:
y = label_binarize(y, classes=np.arange(np.max(y) + 1))
if y.shape[-1] == 1:
# binary targets transform to a column vector with label_binarize
y = np.array([1 - y[:, 0], y[:, 0]]).T
if y_hat is not None:
if len(y_hat.shape) == 1:
y_hat = np.array([1 - y_hat, y_hat]).T
return y, y_hat
def fit_predict(self, X, y, y_hat):
y, y_hat = self._preprocess_ys(y, y_hat)
X = _check_X(X, self.n_components, ensure_min_samples=2)
self._check_n_features(X, reset=True)
self._check_initial_parameters(X)
# if we enable warm_start, we will have a unique initialisation
do_init = not (self.warm_start and hasattr(self, "converged_")) #do_init is True.
n_init = self.n_init if do_init else 1 #This is set to 1.
max_lower_bound = -np.infty
self.converged_ = False
random_state = check_random_state(self.random_state)
n_samples, _ = X.shape
for init in range(n_init):
self._print_verbose_msg_init_beg(init)
if do_init:
self._initialize_parameters(X, y, y_hat, random_state)
lower_bound = -np.infty if do_init else self.lower_bound_
for n_iter in tqdm(range(1, self.max_iter + 1), colour="#f17a4a"):
prev_lower_bound = lower_bound
log_prob_norm, log_resp = self._e_step(X, y, y_hat)
self._m_step(X, y, y_hat, log_resp)
lower_bound = self._compute_lower_bound(log_resp, log_prob_norm)
change = lower_bound - prev_lower_bound
self._print_verbose_msg_iter_end(n_iter, change)
if abs(change) < self.tol:
self.converged_ = True
break
self._print_verbose_msg_init_end(lower_bound)
if lower_bound > max_lower_bound:
max_lower_bound = lower_bound
best_params = self._get_parameters()
best_n_iter = n_iter
if not self.converged_:
warnings.warn(
"Initialization %d did not converge. "
"Try different init parameters, "
"or increase max_iter, tol "
"or check for degenerate data." % (init + 1),
ConvergenceWarning,
)
self._set_parameters(best_params)
self.n_iter_ = best_n_iter
self.lower_bound_ = max_lower_bound
# Always do a final e-step to guarantee that the labels returned by
# fit_predict(X) are always consistent with fit(X).predict(X)
# for any value of max_iter and tol (and any random_state).
_, log_resp = self._e_step(X, y, y_hat)
return log_resp.argmax(axis=1)
def predict_proba(
self, X: np.ndarray, y: np.ndarray = None, y_hat: np.ndarray = None
):
y, y_hat = self._preprocess_ys(y, y_hat)
check_is_fitted(self)
X = _check_X(X, None, self.means_.shape[1])
_, log_resp = self._estimate_log_prob_resp(X, y, y_hat)
return np.exp(log_resp)
def _m_step(self, X, y, y_hat, log_resp):
"""M step.
Parameters
----------
X : array-like of shape (n_samples, n_features)
log_resp : array-like of shape (n_samples, n_components)
Logarithm of the posterior probabilities (or responsibilities) of
the point of each sample in X.
"""
resp = np.exp(log_resp)
n_samples, _ = X.shape
(
self.weights_,
self.means_,
self.covariances_,
self.y_probs,
self.y_hat_probs,
) = _estimate_parameters(
X, y, y_hat, resp, self.reg_covar, self.covariance_type
)
self.weights_ /= n_samples
self.precisions_cholesky_ = _compute_precision_cholesky(
self.covariances_, self.covariance_type
)
def _e_step(self, X, y, y_hat):
"""E step.
Parameters
----------
X : array-like of shape (n_samples, n_features)
Returns
-------
log_prob_norm : float
Mean of the logarithms of the probabilities of each sample in X
log_responsibility : array, shape (n_samples, n_components)
Logarithm of the posterior probabilities (or responsibilities) of
the point of each sample in X.
"""
log_prob_norm, log_resp = self._estimate_log_prob_resp(X, y, y_hat)
return np.mean(log_prob_norm), log_resp
def _estimate_log_prob_resp(self, X, y=None, y_hat=None):
"""Estimate log probabilities and responsibilities for each sample.
Compute the log probabilities, weighted log probabilities per
component and responsibilities for each sample in X with respect to
the current state of the model.
Parameters
----------
X : array-like of shape (n_samples, n_features)
Returns
-------
log_prob_norm : array, shape (n_samples,)
log p(X)
log_responsibilities : array, shape (n_samples, n_components)
logarithm of the responsibilities
"""
weighted_log_prob = self._estimate_weighted_log_prob(X, y, y_hat)
log_prob_norm = logsumexp(weighted_log_prob, axis=1)
with np.errstate(under="ignore"):
# ignore underflow
log_resp = weighted_log_prob - log_prob_norm[:, np.newaxis]
return log_prob_norm, log_resp
def _estimate_weighted_log_prob(self, X, y=None, y_hat=None):
log_prob = self._estimate_log_prob(X) + self._estimate_log_weights()
if y is not None:
log_prob += self._estimate_y_log_prob(y) * self.y_log_likelihood_weight
if y_hat is not None:
log_prob += (
self._estimate_y_hat_log_prob(y_hat) * self.y_hat_log_likelihood_weight
)
return log_prob
def _get_parameters(self):
return (
self.weights_,
self.means_,
self.covariances_,
self.y_probs,
self.y_hat_probs,
self.precisions_cholesky_,
)
def _set_parameters(self, params):
(
self.weights_,
self.means_,
self.covariances_,
self.y_probs,
self.y_hat_probs,
self.precisions_cholesky_,
) = params
# Attributes computation
_, n_features = self.means_.shape
if self.covariance_type == "full":
self.precisions_ = np.empty(self.precisions_cholesky_.shape)
for k, prec_chol in enumerate(self.precisions_cholesky_):
self.precisions_[k] = np.dot(prec_chol, prec_chol.T)
elif self.covariance_type == "tied":
self.precisions_ = np.dot(
self.precisions_cholesky_, self.precisions_cholesky_.T
)
else:
self.precisions_ = self.precisions_cholesky_ ** 2
def _n_parameters(self):
"""Return the number of free parameters in the model."""
return super()._n_parameters() + 2 * self.n_components
def _estimate_y_log_prob(self, y):
"""Estimate the Gaussian distribution parameters.
Parameters
----------
y: array-like of shape (n_samples, n_classes)
y_hat: array-like of shpae (n_samples, n_classes)
"""
# add epsilon to avoid "RuntimeWarning: divide by zero encountered in log"
return np.log(np.dot(y, self.y_probs.T) + np.finfo(self.y_probs.dtype).eps)
def _estimate_y_hat_log_prob(self, y_hat):
"""Estimate the Gaussian distribution parameters.
Parameters
----------
y: array-like of shape (n_samples, n_classes)
y_hat: array-like of shpae (n_samples, n_classes)
"""
# add epsilon to avoid "RuntimeWarning: divide by zero encountered in log"
return np.log(
np.dot(y_hat, self.y_hat_probs.T) + np.finfo(self.y_hat_probs.dtype).eps
)
def _estimate_parameters(X, y, y_hat, resp, reg_covar, covariance_type):
"""Estimate the Gaussian distribution parameters.
Parameters
----------
X : array-like of shape (n_samples, n_features)
The input data array.
y: array-like of shape (n_samples, n_classes)
y_hat: array-like of shpae (n_samples, n_classes)
resp : array-like of shape (n_samples, n_components)
The responsibilities for each data sample in X.
reg_covar : float
The regularization added to the diagonal of the covariance matrices.
covariance_type : {'full', 'tied', 'diag', 'spherical'}
The type of precision matrices.
Returns
-------
nk : array-like of shape (n_components,)
The numbers of data samples in the current components.
means : array-like of shape (n_components, n_features)
The centers of the current components.
covariances : array-like
The covariance matrix of the current components.
The shape depends of the covariance_type.
"""
nk = resp.sum(axis=0) + 10 * np.finfo(resp.dtype).eps # (n_components, )
means = np.dot(resp.T, X) / nk[:, np.newaxis]
covariances = {
"full": _estimate_gaussian_covariances_full,
"tied": _estimate_gaussian_covariances_tied,
"diag": _estimate_gaussian_covariances_diag,
"spherical": _estimate_gaussian_covariances_spherical,
}[covariance_type](resp, X, nk, means, reg_covar)
y_probs = np.dot(resp.T, y) / nk[:, np.newaxis] # (n_components, n_classes)
y_hat_probs = np.dot(resp.T, y_hat) / nk[:, np.newaxis] # (n_components, n_classes)
return nk, means, covariances, y_probs, y_hat_probs | 29,931 | 39.231183 | 89 | py |
robust-transformers | robust-transformers-main/examples/pytorch/slice-discovery/domino_learnt_slicer.py | import math
import numpy as np
from turtle import forward
import torch
import torch.utils.checkpoint
from packaging import version
from torch import nn, optim, autograd
import torch.distributed as dist
from torch.distributed import ReduceOp
from torch.nn import BCEWithLogitsLoss, CrossEntropyLoss, MSELoss
from dataclasses import dataclass, field
from collections.abc import Mapping
from typing import TYPE_CHECKING, Any, Callable, Dict, List, Optional, Tuple, Union
from transformers.modeling_utils import PreTrainedModel, PretrainedConfig
from torch.distributions.categorical import Categorical
from torch.distributions.uniform import Uniform
from torch.distributions.kl import kl_divergence
from transformers.modeling_outputs import SequenceClassifierOutput
class DominoSlicer(nn.Module):
def __init__(self, args, training_args, dro_args, task_model):
super().__init__()
self.args = args
self.dro_args = dro_args
self.training_args = training_args
self.task_model = task_model
self.n_slices = args.n_slices
self.batch_size = training_args.per_device_train_batch_size
self.n_features = args.n_features
self.entropy_reg = args.entropy_reg
self.marginal_reg = args.marginal_reg
self.grouper_model = nn.Sequential(
nn.Linear(self.n_features, 64),
nn.ReLU(),
nn.Linear(64, 32),
nn.ReLU(),
nn.Linear(32, self.n_slices),
nn.Softmax()
)
# gcdro parameters relevant for group-wise maximization
self.count_cat = self._prepare_input(torch.ones(self.n_slices).float())
self.gamma = dro_args.gamma
self.max_var_weight = dro_args.max_var_weight # GCDRO uses a minimum variance if weight
self.min_var_weight = dro_args.min_var_weight
self.alpha = dro_args.alpha # How many groups to underweigh.
# Beta cover
self.beta = dro_args.beta
self.beta_ema = dro_args.beta_ema
self.do_instance_reweight = dro_args.do_instance_reweight
# quantities maintained throughout training for instance level G-DRO
self.accum_losses = None
# running averages
self.adj = self._prepare_input(torch.zeros(self.n_slices).float())
self.adv_probs = self._prepare_input(torch.ones(self.n_slices)) #/self.n_groups
self.reverse_adv_probs = self._prepare_input(torch.ones(self.n_slices)) #/self.n_groups
self.group_loss = self._prepare_input(torch.zeros(self.n_slices))
self.count_cat = self._prepare_input(torch.ones(self.n_slices).float())
self.exp_avg_loss = self._prepare_input(torch.zeros(self.n_slices))
self.group_distribution = self._prepare_input(torch.full((self.batch_size, self.n_slices), 1/self.n_slices))
self.exp_avg_initialized = self._prepare_input(torch.zeros(self.n_slices).byte())
self.reset_stats()
def _prepare_input(self, data: Union[torch.Tensor, Any]) -> Union[torch.Tensor, Any]:
"""
Prepares one `data` before feeding it to the model, be it a tensor or a nested list/dictionary of tensors.
"""
if isinstance(data, Mapping):
return type(data)({k: self._prepare_input(v) for k, v in data.items()})
elif isinstance(data, (tuple, list)):
return type(data)(self._prepare_input(v) for v in data)
elif isinstance(data, torch.Tensor):
kwargs = dict(device=self.training_args.device)
if self.training_args.deepspeed and data.dtype != torch.int64:
# NLP models inputs are int64 and those get adjusted to the right dtype of the
# embedding. Other models such as wav2vec2's inputs are already float and thus
# may need special handling to match the dtypes of the model
kwargs.update(dict(dtype=self.training_args.hf_deepspeed_config.dtype()))
return data.to(**kwargs)
return data
def forward(self, input_ids, attention_mask, group, group_features=None, labels=None, adversary=False, **kwargs):
# inputs has input_ids, attention_mask for task_model, group ids are computed dynamically based on features
# which is a vector of size self.n_features
"""
1. Compute group distributions.
2. Get instance level losses.
2. Compute aggregate loss over groups.
"""
self.group_distribution = self.grouper_model(group_features) # B * G
task_model_outputs = self.task_model(input_ids, attention_mask, labels=labels)
per_sample_losses = task_model_outputs["loss"] # B * 1 [Individual losses]
# Group wise loss.
group_losses = self.compute_soft_group_loss(per_sample_losses, self.group_distribution)
group_count = self.group_distribution.sum(0)
# group_loss, group_count = self.compute_group_avg(per_sample_losses, group_idx)
yhat = task_model_outputs[1]
minibatch_group_acc, minibatch_group_count = self.compute_group_avg((torch.argmax(yhat,1)==labels).float(), self.group_distribution)
# group_losses = self.compute_group_loss(per_sample_losses, group)
# group_map = (group == self._prepare_input(torch.arange(self.n_slices).unsqueeze(1).long())).float()
# group_count = group_map.sum(1)
dist.all_reduce(group_count, op=ReduceOp.SUM)
dist.all_reduce(group_losses, op=ReduceOp.SUM)
# normalize group_wise loss.
group_denom = group_count + (group_count==0).float() # avoid nans
group_losses = (group_losses)/group_denom
# only update this in primary pass
if not adversary:
self.update_exp_avg_loss(group_losses.detach(), group_count.detach())
adjusted_loss = self.exp_avg_loss + self.adj/torch.sqrt(self.count_cat)
if adversary:
loss, weights = self.compute_adversary_loss_greedy(group_losses, adjusted_loss)
# Regularizer 1 (Entropy of group distribution should be high)
cp = Categorical(self.group_distribution)
reg1 = -cp.entropy()
loss += self.entropy_reg * reg1.mean()
# Regularizer 2 (biased estimate of group marginal should be closer to a uniform prior)
marginal = Categorical(self.group_distribution.sum(0)/self.group_distribution.sum())
prior = Categorical(self._prepare_input(torch.full((self.n_slices,), 1.0/self.n_slices)))
reg2 = kl_divergence(marginal, prior)
loss += self.marginal_reg * reg2
self.update_stats(loss, group_losses, minibatch_group_acc, minibatch_group_count, weights)
# Redundancy regularizer (which enables models to learn disparate group assignments)
# if group_features are trainable, the average feature vectors of each group after assignment should be as little as possible.
else:
loss, weights = self.compute_loss_greedy(group_losses, adjusted_loss)
# update stats
self.update_stats(loss, group_losses, minibatch_group_acc, minibatch_group_count, weights)
# the expected return functions should contain same outputs as task_model
return SequenceClassifierOutput(loss=loss, logits=task_model_outputs["logits"])
def compute_group_loss(self, losses, group_idx):
group_map = (group_idx == self._prepare_input(torch.arange(self.n_slices).unsqueeze(1).long())).float()
group_loss = (group_map @ losses.view(-1))
return group_loss
def compute_loss_greedy(self, group_loss, ref_loss):
sorted_idx = ref_loss.sort(descending=True)[1]
past_frac = self.count_cat / self.count_cat.sum()
sorted_frac = past_frac[sorted_idx]
cutoff_count = torch.sum(torch.cumsum(sorted_frac, 0) < self.alpha)
if cutoff_count == len(sorted_frac):
cutoff_count = len(sorted_frac) - 1
self.adv_probs = self.adv_probs.new_full(self.adv_probs.size(), self.min_var_weight)
self.adv_probs[sorted_idx[:cutoff_count]] = 1.0 / self.alpha
leftover_mass = 1.0 - sorted_frac[:cutoff_count].sum().div(self.alpha)
tiebreak_fraction = leftover_mass / sorted_frac[cutoff_count] # check!
self.adv_probs[sorted_idx[cutoff_count]] = tiebreak_fraction
robust_loss = (group_loss @ self.adv_probs)
# There is an issue here that Paul pointed out. There are many
self.group_loss = group_loss
return robust_loss, self.adv_probs
def compute_soft_group_loss(self, losses, group_prob):
group_wise_loss = group_prob * losses.unsqueeze(1)
return group_wise_loss.sum(0)
def compute_eiil_loss(self, group_loss, ref_loss):
"""
scale = torch.tensor(1.).cuda().requires_grad_()
lossa = (loss.squeeze() * env_w.sigmoid()).mean()
grada = autograd.grad(lossa, [scale], create_graph=True)[0]
penaltya = torch.sum(grada**2)
# penalty for env b
lossb = (loss.squeeze() * (1-env_w.sigmoid())).mean()
gradb = autograd.grad(lossb, [scale], create_graph=True)[0]
penaltyb = torch.sum(gradb**2)
# negate
npenalty = - torch.stack([penaltya, penaltyb]).mean()
"""
# scale weighted group losses by 1.0
# Then take gradients of each group loss, compute its norm and take mean across groups
# Finally add that as the penalty
scale = self._prepare_input(torch.tensor(1.).cuda().requires_grad_())
group_grads = autograd.grad(group_loss, [scale], create_graph=True)[0]
self.reverse_adv_probs = self.reverse_adv_probs.new_full(self.reverse_adv_probs.size(), self.max_var_weight)
penalty = torch.sum(group_grads**2)
npenalty = - torch.stack(penalty).mean()
return npenalty, self.reverse_adv_probs
def compute_adversary_loss_greedy(self, group_loss, ref_loss):
sorted_idx = ref_loss.sort(descending=True)[1]
past_frac = self.count_cat / self.count_cat.sum()
sorted_frac = past_frac[sorted_idx]
cutoff_count = torch.sum(torch.cumsum(sorted_frac, 0) < self.alpha)
if cutoff_count == len(sorted_frac):
cutoff_count = len(sorted_frac) - 1
self.reverse_adv_probs = self.reverse_adv_probs.new_full(self.reverse_adv_probs.size(), self.max_var_weight)
self.reverse_adv_probs[sorted_idx[:cutoff_count]] = 1.0 * self.alpha
leftover_mass = 1.0 - sorted_frac[:cutoff_count].sum().mul(self.alpha)
tiebreak_fraction = leftover_mass * sorted_frac[cutoff_count] # check!
self.reverse_adv_probs[sorted_idx[cutoff_count]] = tiebreak_fraction
# alternate strategy. (alpha groups have the highest weight but these are the min loss groups)
"""
sorted_idx = ref_loss.sort(descending=False)[1]
past_frac = self.count_cat / self.count_cat.sum()
sorted_frac = past_frac[sorted_idx]
cutoff_count = torch.sum(torch.cumsum(sorted_frac, 0) < self.alpha)
if cutoff_count == len(sorted_frac):
cutoff_count = len(sorted_frac) - 1
self.reverse_adv_probs = self.reverse_adv_probs.new_full(self.reverse_adv_probs.size(), self.min_var_weight)
self.reverse_adv_probs[sorted_idx[:cutoff_count]] = 1.0 / self.alpha
leftover_mass = 1.0 - sorted_frac[:cutoff_count].sum().div(self.alpha)
tiebreak_fraction = leftover_mass / sorted_frac[cutoff_count] # check!
self.reverse_adv_probs[sorted_idx[cutoff_count]] = tiebreak_fraction
"""
## Reversed weights (up-weight the highest loss groups even more)
# self.reverse_adv_probs = self.reverse_adv_probs.new_full(self.reverse_adv_probs.size(), self.min_var_weight)
# self.reverse_adv_probs[sorted_idx[:cutoff_count]] = 1.0 / self.alpha
# leftover_mass = 1.0 - sorted_frac[:cutoff_count].sum().div(self.alpha)
# tiebreak_fraction = leftover_mass / sorted_frac[cutoff_count] # check!
# self.reverse_adv_probs[sorted_idx[cutoff_count]] = tiebreak_fraction
robust_loss = -(group_loss @ self.reverse_adv_probs)
return robust_loss, self.reverse_adv_probs
def update_exp_avg_loss(self, group_loss, group_count):
## TODO: Chunting's code is doing a different kind of exponential averaging, exp_avf_initialized not used.
prev_weights = (1 - self.gamma*(group_count>0).float()) * (self.exp_avg_initialized>0).float()
curr_weights = 1 - prev_weights
self.exp_avg_loss = self.exp_avg_loss * prev_weights + group_loss*curr_weights
## TODO: Chunting's code is also doing an exponential averaging of counts (with alpha 0.05)
self.count_cat = self.count_cat.mul(1 - 0.05).add(group_count, alpha=0.05)
self.exp_avg_initialized = (self.exp_avg_initialized>0) + (group_count>0)
def compute_group_avg(self, losses, group_distribution):
# Find argmax for groups
group_idx = torch.argmax(group_distribution, dim=1)
group_map = (group_idx == self._prepare_input(torch.arange(self.n_slices).unsqueeze(1).long())).float()
group_count = group_map.sum(1)
group_denom = group_count + (group_count==0).float() # avoid nans
group_loss = (group_map @ losses.view(-1))/group_denom
return group_loss, group_count
def reset_stats(self):
self.processed_data_counts = self._prepare_input(torch.zeros(self.n_slices))
self.update_data_counts = self._prepare_input(torch.zeros(self.n_slices))
self.update_batch_counts = self._prepare_input(torch.zeros(self.n_slices))
self.avg_group_loss = self._prepare_input(torch.zeros(self.n_slices))
self.avg_group_acc = self._prepare_input(torch.zeros(self.n_slices))
# tr_loss_step_primary = torch.tensor(0.0).to(args.device)
self.avg_per_sample_loss = self._prepare_input(torch.tensor(0.0))
self.avg_actual_loss = self._prepare_input(torch.tensor(0.0))
self.avg_acc = self._prepare_input(torch.tensor(0.0))
self.batch_count = 0.
#TODO: Chunting also sets weights to 1 here, and self.exp_avg_loss to 0
self.exp_avg_loss.fill_(0.)
self.adv_probs.fill_(1.)
# TODO: (Check with chunting's code, but she is being conservative with the inner beta update. )
self.accum_losses = None
def update_stats(self, actual_loss, group_loss, group_acc, group_count, weights=None):
# avg group loss
denom = self.processed_data_counts + group_count
denom += (denom==0).float()
prev_weight = self.processed_data_counts/denom
curr_weight = group_count/denom
self.avg_group_loss = prev_weight*self.avg_group_loss + curr_weight*group_loss
# avg group acc
self.avg_group_acc = prev_weight*self.avg_group_acc + curr_weight*group_acc
# batch-wise average actual loss
denom = self.batch_count + 1
self.avg_actual_loss = (self.batch_count/denom)*self.avg_actual_loss + (1/denom)*actual_loss
# counts
self.processed_data_counts += group_count
if self.dro_args.is_robust:
self.update_data_counts += group_count*((weights>0).float())
self.update_batch_counts += ((group_count*weights)>0).float()
else:
self.update_data_counts += group_count
self.update_batch_counts += (group_count>0).float()
self.batch_count+=1
# avg per-sample quantities
group_frac = self.processed_data_counts/(self.processed_data_counts.sum())
self.avg_per_sample_loss = group_frac @ self.avg_group_loss
self.avg_acc = group_frac @ self.avg_group_acc
def get_stats(self, model=None, args=None):
stats_dict = {}
for idx in range(self.n_slices):
stats_dict[f'avg_loss_group:{idx}'] = self.avg_group_loss[idx].item()
stats_dict[f'exp_avg_loss_group:{idx}'] = self.exp_avg_loss[idx].item()
stats_dict[f'avg_acc_group:{idx}'] = self.avg_group_acc[idx].item()
stats_dict[f'processed_data_count_group:{idx}'] = self.processed_data_counts[idx].item()
stats_dict[f'update_data_count_group:{idx}'] = self.update_data_counts[idx].item()
stats_dict[f'update_batch_count_group:{idx}'] = self.update_batch_counts[idx].item()
# if initially these are float?
stats_dict['avg_actual_loss'] = self.avg_actual_loss.item()
stats_dict['avg_per_sample_loss'] = self.avg_per_sample_loss.item()
stats_dict['avg_acc'] = self.avg_acc.item()
# Model stats
# if model is not None:
# assert args is not None
# stats_dict = self.get_model_stats(model, args, stats_dict)
return stats_dict
def log_stats(self, logger, is_training):
if logger is None:
return
logger.info(f'Average incurred loss: {self.avg_per_sample_loss.item():.3f} \n')
logger.info(f'Average sample loss: {self.avg_actual_loss.item():.3f} \n')
logger.info(f'Average acc: {self.avg_acc.item():.3f} \n')
for group_idx in range(self.n_slices):
logger.info(
# f' {self.group_str(group_idx)} '
f'[n = {int(self.processed_data_counts[group_idx])}]:\t'
f'loss = {self.avg_group_loss[group_idx]:.3f} '
f'exp loss = {self.exp_avg_loss[group_idx]:.3f} '
f'adv prob = {self.adv_probs[group_idx]:3f} '
f'acc = {self.avg_group_acc[group_idx]:.3f}\n')
# logger.flush()
def compute_beta_cover(self, seed, epoch, dataset, losses=None, groups=None):
# beta cover computed at the end of every epoch
# split array can be computed based on grouper model highest probability group assignments, which are passed to this function if needed.
if groups is not None:
split_array = groups
else:
split_array = np.array([item["group"] for item in dataset])
total = len(split_array)
if losses is not None:
if self.accum_losses is None:
self.accum_losses = losses
else:
self.accum_losses = self.accum_losses * (1 - self.beta_ema) + losses * self.beta_ema
for gidx in range(self.n_slices):
select_idx = np.where(split_array == gidx)[0]
count = len(select_idx)
idx_sorted = np.argsort(self.accum_losses[select_idx])
idx = select_idx[idx_sorted][::-1]
cutoff_count = int((total - count) * count * self.beta / (total - count * self.beta))
self.weight_array[idx] = count / total
self.weight_array[idx[:cutoff_count]] = 1.0 / self.beta
else:
self.weight_array = np.ones(total)
return self.weight_array | 19,060 | 48.897906 | 144 | py |
robust-transformers | robust-transformers-main/examples/pytorch/slice-discovery/learn_groups.py | # A way to learn ideal incorporation of features for clustering in order to identify regions that have high loss
# Instantiate the network randomly
# Train for few epochs until convergence for the network to predict the same assignment as the ones given by the GMM model (improves convergence maybe)
# Train for the final few epochs to increase loss
""" Finetuning slice discovery module for high loss and high clustering effect."""
import logging
import os
import random
import sys
from dataclasses import dataclass, field
from typing import Optional
import pandas as pd
import datasets
import numpy as np
from collections import OrderedDict
from datasets import load_dataset, load_metric
import torch
import transformers
from transformers import (
AutoConfig,
AutoModelForSequenceClassification,
AutoTokenizer,
CartographyDataCollatorWithPadding,
EvalPrediction,
HfArgumentParser,
PretrainedConfig,
DominoTrainingArguments,
TrainerSlicer,
DroArguments,
cartography_data_collator,
set_seed,
)
from transformers import training_args
from transformers.file_utils import WEIGHTS_NAME
from transformers.trainer_utils import get_last_checkpoint
from transformers.utils import check_min_version
from transformers.utils.versions import require_version
from domino_learnt_slicer import DominoSlicer
# Will error if the minimal version of Transformers is not installed. Remove at your own risks.
check_min_version("4.18.0.dev0")
require_version("datasets>=1.8.0", "To fix: pip install -r examples/pytorch/text-classification/requirements.txt")
task_to_keys = {
"cola": ("sentence", None),
"mnli": ("premise", "hypothesis"),
"mrpc": ("sentence1", "sentence2"),
"qnli": ("question", "sentence"),
"qqp": ("question1", "question2"),
"rte": ("sentence1", "sentence2"),
"sst2": ("sentence", None),
"stsb": ("sentence1", "sentence2"),
"wnli": ("sentence1", "sentence2"),
}
custom_task_to_keys = {
"mnli_resplit": ("sentence1", "sentence2"),
"wilds_civil_comments": ("sentence1", None),
"winogrande": ("sentence1", "sentence2"),
"commonsenseqa": ("sentence1", "sentence2"),
"wanli": ("premise", "hypothesis"),
"qqp": ("sentence1", "sentence2"),
"sst2": ("sentence", None),
"fever": ("sentence1", "sentence2"),
}
logger = logging.getLogger(__name__)
@dataclass
class DataTrainingArguments:
"""
Arguments pertaining to what data we are going to input our model for training and eval.
Using `HfArgumentParser` we can turn this class
into argparse arguments to be able to specify them on
the command line.
"""
task_name: Optional[str] = field(
default=None,
metadata={"help": "The name of the task to train on: " + ", ".join(task_to_keys.keys())},
)
custom_task_name: Optional[str] = field(
default="mnli_resplit",
metadata={"help": "The name of the task to train on: " + ", ".join(task_to_keys.keys())},
)
transform_labels: bool = field(
default=False,
metadata={"help": "Whether to transform class labels for a task to fit OOD datasets."},
)
dataset_name: Optional[str] = field(
default=None, metadata={"help": "The name of the dataset to use (via the datasets library)."}
)
dataset_config_name: Optional[str] = field(
default=None, metadata={"help": "The configuration name of the dataset to use (via the datasets library)."}
)
max_seq_length: int = field(
default=128,
metadata={
"help": "The maximum total input sequence length after tokenization. Sequences longer "
"than this will be truncated, sequences shorter will be padded."
},
)
overwrite_cache: bool = field(
default=False, metadata={"help": "Overwrite the cached preprocessed datasets or not."}
)
pad_to_max_length: bool = field(
default=True,
metadata={
"help": "Whether to pad all samples to `max_seq_length`. "
"If False, will pad the samples dynamically when batching to the maximum length in the batch."
},
)
max_train_samples: Optional[int] = field(
default=None,
metadata={
"help": "For debugging purposes or quicker training, truncate the number of training examples to this "
"value if set."
},
)
max_eval_samples: Optional[int] = field(
default=None,
metadata={
"help": "For debugging purposes or quicker training, truncate the number of evaluation examples to this "
"value if set."
},
)
max_predict_samples: Optional[int] = field(
default=None,
metadata={
"help": "For debugging purposes or quicker training, truncate the number of prediction examples to this "
"value if set."
},
)
train_file: Optional[str] = field(
default=None, metadata={"help": "A csv or a json file containing the training data."}
)
validation_file: Optional[str] = field(
default=None, metadata={"help": "A csv or a json file containing the validation data."}
)
train_feature_file: Optional[str] = field(
default=None, metadata={"help": "A a Meerkat dataframe consisting of train features for group membership.."}
)
validation_feature_file: Optional[str] = field(
default=None, metadata={"help": "A a Meerkat dataframe consisting of validation features for group membership."}
)
test_file: Optional[str] = field(default=None, metadata={"help": "A csv or a json file containing the test data."})
def __post_init__(self):
if self.task_name is not None:
self.task_name = self.task_name.lower()
if self.task_name not in task_to_keys.keys():
raise ValueError("Unknown task, you should pick one in " + ",".join(task_to_keys.keys()))
elif self.dataset_name is not None:
pass
elif self.train_file is None or self.validation_file is None:
raise ValueError("Need either a GLUE task, a training/validation file or a dataset name.")
else:
train_extension = self.train_file.split(".")[-1]
assert train_extension in ["tsv", "csv", "json"], "`train_file` should be a csv or a json file."
validation_extension = self.validation_file.split(".")[-1]
assert (
validation_extension == train_extension
), "`validation_file` should have the same extension (csv or json) as `train_file`."
@dataclass
class ModelArguments:
"""
Arguments pertaining to which model/config/tokenizer we are going to fine-tune from.
"""
model_name_or_path: str = field(
metadata={"help": "Path to pretrained model or model identifier from huggingface.co/models"}
)
adversary_model_name_or_path: Optional[str] = field(
default=None, metadata={"help": "Path to pretrained adversary model"}
)
config_name: Optional[str] = field(
default=None, metadata={"help": "Pretrained config name or path if not the same as model_name"}
)
tokenizer_name: Optional[str] = field(
default=None, metadata={"help": "Pretrained tokenizer name or path if not the same as model_name"}
)
cache_dir: Optional[str] = field(
default=None,
metadata={"help": "Where do you want to store the pretrained models downloaded from huggingface.co"},
)
use_fast_tokenizer: bool = field(
default=True,
metadata={"help": "Whether to use one of the fast tokenizer (backed by the tokenizers library) or not."},
)
model_revision: str = field(
default="main",
metadata={"help": "The specific model version to use (can be a branch name, tag name or commit id)."},
)
use_auth_token: bool = field(
default=False,
metadata={
"help": "Will use the token generated when running `transformers-cli login` (necessary to use this script "
"with private models)."
},
)
n_slices: int = field(
default=9,
metadata={
"help": "Number of group assignments to learn."
}
)
n_features: int = field(
default=772,
metadata={
"help": "Number of group assignments to learn."
}
)
entropy_reg: float = field(
default=0.0,
metadata={
"help": "Use Entropy Regularizer"
}
)
marginal_reg: float = field(
default=0.0,
metadata={
"help": "Use Entropy Regularizer"
}
)
def main():
parser = HfArgumentParser((ModelArguments, DataTrainingArguments, DominoTrainingArguments, DroArguments))
model_args, data_args, training_args, dro_args = parser.parse_args_into_dataclasses()
# Setup logging
logging.basicConfig(
format="%(asctime)s - %(levelname)s - %(name)s - %(message)s",
datefmt="%m/%d/%Y %H:%M:%S",
handlers=[logging.StreamHandler(sys.stdout)],
)
# in our grouping we still want to acheive the worst group performance possible.
# initialize predictive model with best possible k-means or GMM parameters
# Run few epochs of loss maximization: It requires an objective that firmly pushes models towards diverse worse groups: Basically there has to be a strong clustering prior
# Loss serves as a proxy for model errors and viceversa
# Initiaize with DOMINO group assignment
# Then maximize objective with entropy and size regularizers.
log_level = training_args.get_process_log_level()
logger.setLevel(log_level)
datasets.utils.logging.set_verbosity(log_level)
transformers.utils.logging.set_verbosity(log_level)
transformers.utils.logging.enable_default_handler()
transformers.utils.logging.enable_explicit_format()
# Log on each process the small summary:
logger.warning(
f"Process rank: {training_args.local_rank}, device: {training_args.device}, n_gpu: {training_args.n_gpu}"
+ f"distributed training: {bool(training_args.local_rank != -1)}, 16-bits training: {training_args.fp16}"
)
logger.info(f"Training/evaluation parameters {training_args}")
last_checkpoint=None
# Set seed before initializing model.
set_seed(training_args.seed)
# Load dataset in the form of local json files
data_files = {"train": data_args.train_file, "validation": data_args.validation_file, "test": data_args.test_file}
raw_datasets = load_dataset("json", data_files=data_files, cache_dir=model_args.cache_dir)
# Labels
is_regression = raw_datasets["train"].features["label"].dtype in ["float32", "float64"]
if is_regression:
num_labels = 1
else:
# A useful fast method:
# https://huggingface.co/docs/datasets/package_reference/main_classes.html#datasets.Dataset.unique
label_list = raw_datasets["train"].unique("label")
label_list.sort() # Let's sort it for determinism
num_labels = len(label_list)
# Pretrained model, tokenizer
config = AutoConfig.from_pretrained(
model_args.config_name if model_args.config_name else model_args.model_name_or_path,
num_labels=num_labels,
finetuning_task=data_args.task_name,
cache_dir=model_args.cache_dir,
revision=model_args.model_revision,
use_auth_token=True if model_args.use_auth_token else None,
)
tokenizer = AutoTokenizer.from_pretrained(
model_args.tokenizer_name if model_args.tokenizer_name else model_args.model_name_or_path,
cache_dir=model_args.cache_dir,
use_fast=model_args.use_fast_tokenizer,
revision=model_args.model_revision,
use_auth_token=True if model_args.use_auth_token else None,
)
model = AutoModelForSequenceClassification.from_pretrained(
model_args.model_name_or_path,
from_tf=bool(".ckpt" in model_args.model_name_or_path),
config=config,
cache_dir=model_args.cache_dir,
revision=model_args.model_revision,
use_auth_token=True if model_args.use_auth_token else None,
)
# Load external feature files
# train_features = pd.read_pickle(os.path.join(data_args.train_feature_file))
# eval_features = pd.read_pickle(os.path.join(data_args.validation_feature_file))
# Preprocessing the raw_datasets
sentence1_key, sentence2_key = custom_task_to_keys[data_args.custom_task_name]
# Padding strategy
if data_args.pad_to_max_length:
padding = "max_length"
else:
# We will pad later, dynamically at batch creation, to the max sequence length in each batch
padding = False
# Labels to ids
label_to_id = {v: i for i, v in enumerate(label_list)}
if label_to_id is not None:
model.config.label2id = label_to_id
model.config.id2label = {id: label for label, id in config.label2id.items()}
elif data_args.task_name is not None and not is_regression:
model.config.label2id = {l: i for i, l in enumerate(label_list)}
model.config.id2label = {id: label for label, id in config.label2id.items()}
if data_args.max_seq_length > tokenizer.model_max_length:
logger.warning(
f"The max_seq_length passed ({data_args.max_seq_length}) is larger than the maximum length for the"
f"model ({tokenizer.model_max_length}). Using max_seq_length={tokenizer.model_max_length}."
)
max_seq_length = min(data_args.max_seq_length, tokenizer.model_max_length)
def preprocess_function(examples):
# Tokenize the texts
args = (
(examples[sentence1_key],) if sentence2_key is None else (examples[sentence1_key], examples[sentence2_key])
)
result = tokenizer(*args, padding=padding, max_length=max_seq_length, truncation=True)
# Map labels to IDs (not necessary for GLUE tasks)
if label_to_id is not None and "label" in examples:
result["label"] = [(label_to_id[l] if l != -1 else -1) for l in examples["label"]]
result["guid"] = examples["guid"]
result["group"] = examples["group"]
#result["group_features"] = [feature_dict[guid] for guid in examples["guid"]]
return result
with training_args.main_process_first(desc="dataset map pre-processing"):
raw_datasets = raw_datasets.map(
preprocess_function,
batched=True,
load_from_cache_file=not data_args.overwrite_cache,
desc="Running tokenizer on dataset",
)
if training_args.do_train:
if "train" not in raw_datasets:
raise ValueError("--do_train requires a train dataset")
train_dataset = raw_datasets["train"]
if data_args.max_train_samples is not None:
train_dataset = train_dataset.select(range(data_args.max_train_samples))
if training_args.do_eval:
if "validation" not in raw_datasets and "validation_matched" not in raw_datasets:
raise ValueError("--do_eval requires a validation dataset")
eval_dataset = raw_datasets["validation_matched" if data_args.task_name == "mnli" else "validation"]
if data_args.max_eval_samples is not None:
eval_dataset = eval_dataset.select(range(data_args.max_eval_samples))
if training_args.do_predict or data_args.task_name is not None or data_args.test_file is not None:
if "test" not in raw_datasets and "test_matched" not in raw_datasets:
raise ValueError("--do_predict requires a test dataset")
predict_dataset = raw_datasets["test_matched" if data_args.task_name == "mnli" else "test"]
if data_args.max_predict_samples is not None:
predict_dataset = predict_dataset.select(range(data_args.max_predict_samples))
# Log a few random samples from the training set:
if training_args.do_train:
for index in random.sample(range(len(train_dataset)), 3):
logger.info(f"Sample {index} of the training set: {train_dataset[index]}.")
# Get the metric function
if data_args.task_name is not None:
metric = load_metric("glue", data_args.task_name)
else:
metric = load_metric("accuracy")
def compute_metrics(p: EvalPrediction):
preds = p.predictions[0] if isinstance(p.predictions, tuple) else p.predictions
preds = np.squeeze(preds) if is_regression else np.argmax(preds, axis=1)
if data_args.transform_labels and data_args.custom_task_name == "mnli_resplit":
keep = [label_to_id["entailment"], label_to_id["neutral"]]
neutral_class = label_to_id["neutral"]
new_preds = []
for pred in preds:
if pred in keep:
new_preds.append(pred)
else:
new_preds.append(neutral_class)
preds = np.array(new_preds, dtype=np.int32)
# preds = np.asarray([p for p in preds if p in keep else neutral_class])
if data_args.task_name is not None:
result = metric.compute(predictions=preds, references=p.label_ids)
if len(result) > 1:
result["combined_score"] = np.mean(list(result.values())).item()
return result
elif is_regression:
return {"mse": ((preds - p.label_ids) ** 2).mean().item()}
else:
return {"accuracy": (preds == p.label_ids).astype(np.float32).mean().item()}
# Data collator will default to DataCollatorWithPadding when the tokenizer is passed to Trainer, so we change it if
# we already did the padding.
if data_args.pad_to_max_length:
data_collator = cartography_data_collator
elif training_args.fp16:
data_collator = CartographyDataCollatorWithPadding(tokenizer, pad_to_multiple_of=8)
else:
data_collator = None
# Declare model for group prediction, which is enveloped in a Learned DOMINO model
domino_model = DominoSlicer(model_args, training_args, dro_args, model)
# load a pretrained adversarial grouper model
if model_args.adversary_model_name_or_path:
state_dict = torch.load(model_args.adversary_model_name_or_path , map_location="cpu")
state_dict_new = OrderedDict({k.replace("grouper_model.", ""):v for k,v in state_dict.items()})
domino_model.grouper_model.load_state_dict(state_dict_new)
# When grouper model is already trained(ie. model_name_or_path is a directory with a grouper model, initialize with it)
if os.path.exists(model_args.model_name_or_path) and os.path.exists(os.path.join(model_args.model_name_or_path, "grouper")):
state_dict = torch.load(os.path.join(model_args.model_name_or_path, "grouper", "pytorch_model.bin") , map_location="cpu")
state_dict_new = OrderedDict({k.replace("grouper_model.", ""):v for k,v in state_dict.items()})
domino_model.grouper_model.load_state_dict(state_dict_new)
# Declare trainer object
trainer = TrainerSlicer(
model=domino_model,
args=training_args,
dro_args=dro_args,
data_collator=data_collator,
train_dataset=train_dataset if training_args.do_train else None,
eval_dataset=eval_dataset if training_args.do_eval else None,
# train_features=train_features if training_args.do_train else None,
# eval_features=eval_features if training_args.do_eval else None,
tokenizer=tokenizer,
compute_metrics=compute_metrics,
)
# Training
if training_args.do_train:
checkpoint = None
if training_args.resume_from_checkpoint is not None:
checkpoint = training_args.resume_from_checkpoint
elif last_checkpoint is not None:
checkpoint = last_checkpoint
train_result = trainer.train(resume_from_checkpoint=checkpoint)
metrics = train_result.metrics
max_train_samples = (
data_args.max_train_samples if data_args.max_train_samples is not None else len(train_dataset)
)
metrics["train_samples"] = min(max_train_samples, len(train_dataset))
trainer.save_model() # Saves the tokenizer too for easy upload
trainer.log_metrics("train", metrics)
trainer.save_metrics("train", metrics)
trainer.save_state()
# Evaluation
if training_args.do_eval:
logger.info("*** Evaluate ***")
# At the end of training, the best model is loaded for evaluation. In case of evaluation called without training, this needs to be done explicitly.
if trainer.state.best_model_checkpoint is not None:
# Wait for everyone to get here so we are sur the model has been saved by process 0.
# if is_torch_tpu_available():
# xm.rendezvous("load_best_model_at_end")
# elif args.local_rank != -1:
# dist.barrier()
logger.info(
f"Loading best model from {trainer.state.best_model_checkpoint} (score: {trainer.state.best_metric})."
)
best_model_path = os.path.join(trainer.state.best_model_checkpoint, WEIGHTS_NAME)
if os.path.exists(best_model_path):
# We load the model state dict on the CPU to avoid an OOM error.
state_dict = torch.load(best_model_path, map_location="cpu")
# If the model is on the GPU, it still works!
trainer._load_state_dict_in_model(state_dict)
else:
logger.warning(
f"Could not locate the best model at {best_model_path}, if you are running a distributed training "
"on multiple nodes, you should activate `--save_on_each_node`."
)
# Loop to handle MNLI double evaluation (matched, mis-matched)
tasks = [data_args.task_name]
eval_datasets = [eval_dataset]
if data_args.task_name == "mnli":
tasks.append("mnli-mm")
eval_datasets.append(raw_datasets["validation_mismatched"])
for eval_dataset, task in zip(eval_datasets, tasks):
metrics = trainer.evaluate(eval_dataset=eval_dataset)
max_eval_samples = (
data_args.max_eval_samples if data_args.max_eval_samples is not None else len(eval_dataset)
)
metrics["eval_samples"] = min(max_eval_samples, len(eval_dataset))
trainer.log_metrics("eval", metrics)
trainer.save_metrics("eval", metrics)
# Predictions
if training_args.do_predict:
logger.info("*** Predict ***")
if trainer.state.best_model_checkpoint is not None:
# Wait for everyone to get here so we are sur the model has been saved by process 0.
# if is_torch_tpu_available():
# xm.rendezvous("load_best_model_at_end")
# elif args.local_rank != -1:
# dist.barrier()
logger.info(
f"Loading best model from {trainer.state.best_model_checkpoint} (score: {trainer.state.best_metric})."
)
best_model_path = os.path.join(trainer.state.best_model_checkpoint, WEIGHTS_NAME)
if os.path.exists(best_model_path):
# We load the model state dict on the CPU to avoid an OOM error.
state_dict = torch.load(best_model_path, map_location="cpu")
# If the model is on the GPU, it still works!
trainer._load_state_dict_in_model(state_dict)
else:
logger.warning(
f"Could not locate the best model at {best_model_path}, if you are running a distributed training "
"on multiple nodes, you should activate `--save_on_each_node`."
)
# Loop to handle MNLI double evaluation (matched, mis-matched)
tasks = [data_args.task_name]
predict_datasets = [predict_dataset]
if data_args.task_name == "mnli":
tasks.append("mnli-mm")
predict_datasets.append(raw_datasets["test_mismatched"])
for predict_dataset, task in zip(predict_datasets, tasks):
# Removing the `label` columns because it contains -1 and Trainer won't like that.
predict_dataset = predict_dataset.remove_columns("label")
predictions = trainer.predict(predict_dataset, metric_key_prefix="predict").predictions
predictions = np.squeeze(predictions) if is_regression else np.argmax(predictions, axis=1)
output_predict_file = os.path.join(training_args.output_dir, f"predict_results_{task}.txt")
if trainer.is_world_process_zero():
with open(output_predict_file, "w") as writer:
logger.info(f"***** Predict results {task} *****")
writer.write("index\tprediction\n")
for index, item in enumerate(predictions):
if is_regression:
writer.write(f"{index}\t{item:3.3f}\n")
else:
item = label_list[item]
writer.write(f"{index}\t{item}\n")
if __name__ == "__main__":
main()
| 25,315 | 42.57315 | 175 | py |
robust-transformers | robust-transformers-main/examples/pytorch/slice-discovery/domino_slicer.py | from __future__ import annotations
import warnings
from functools import wraps
from typing import Union
import meerkat as mk
import numpy as np
import sklearn.cluster as cluster
from scipy import linalg
from scipy.special import logsumexp
from sklearn.decomposition import PCA
from sklearn.exceptions import ConvergenceWarning
from sklearn.mixture import GaussianMixture
from sklearn.mixture._base import _check_X, check_random_state
from sklearn.mixture._gaussian_mixture import (
_compute_precision_cholesky,
_estimate_gaussian_covariances_diag,
_estimate_gaussian_covariances_full,
_estimate_gaussian_covariances_spherical,
_estimate_gaussian_covariances_tied,
)
from sklearn.preprocessing import label_binarize
from sklearn.utils.validation import check_is_fitted
from tqdm.auto import tqdm
from abc import ABC, abstractmethod
from dataclasses import dataclass
import torch.nn as nn
from utils import unpack_args
class Slicer(ABC):
@dataclass
class Config:
pass
RESOURCES_REQUIRED = {"cpu": 1, "custom_resources": {"ram_gb": 4}}
def __init__(self, n_slices: int):
self.config = self.Config()
self.config.n_slices = n_slices
@abstractmethod
def fit(
self,
model: nn.Module = None,
data_dp: mk.DataPanel = None,
) -> Slicer:
raise NotImplementedError()
@abstractmethod
def transform(self, data_dp: mk.DataPanel) -> mk.DataPanel:
raise NotImplementedError()
class DominoSlicer(Slicer):
r"""
Slice Discovery based on the Domino Mixture Model.
Discover slices by jointly modeling a mixture of input embeddings (e.g. activations
from a trained model), class labels, and model predictions. This encourages slices
that are homogeneous with respect to error type (e.g. all false positives).
Examples
--------
Suppose you've trained a model and stored its predictions on a dataset in
a `Meerkat DataPanel <https://github.com/robustness-gym/meerkat>`_ with columns
"emb", "target", and "pred_probs". After loading the DataPanel, you can discover
underperforming slices of the validation dataset with the following:
.. code-block:: python
from domino import DominoSlicer
dp = ... # Load dataset into a Meerkat DataPanel
# split dataset
valid_dp = dp.lz[dp["split"] == "valid"]
test_dp = dp.lz[dp["split"] == "test"]
domino = DominoSlicer()
domino.fit(
data=valid_dp, embeddings="emb", targets="target", pred_probs="pred_probs"
)
dp["domino_slices"] = domino.transform(
data=test_dp, embeddings="emb", targets="target", pred_probs="pred_probs"
)
Args:
n_slices (int, optional): The number of slices to discover.
Defaults to 5.
covariance_type (str, optional): The type of covariance parameter
:math:`\mathbf{\Sigma}` to use. Same as in sklearn.mixture.GaussianMixture.
Defaults to "diag", which is recommended.
n_pca_components (Union[int, None], optional): The number of PCA components
to use. If ``None``, then no PCA is performed. Defaults to 128.
n_mixture_components (int, optional): The number of clusters in the mixture
model, :math:`\bar{k}`. This differs from ``n_slices`` in that the
``DominoSDM`` only returns the top ``n_slices`` with the highest error rate
of the ``n_mixture_components``. Defaults to 25.
y_log_likelihood_weight (float, optional): The weight :math:`\gamma` applied to
the :math:`P(Y=y_{i} | S=s)` term in the log likelihood during the E-step.
Defaults to 1.
y_hat_log_likelihood_weight (float, optional): The weight :math:`\hat{\gamma}`
applied to the :math:`P(\hat{Y} = h_\theta(x_i) | S=s)` term in the log
likelihood during the E-step. Defaults to 1.
max_iter (int, optional): The maximum number of iterations to run. Defaults
to 100.
init_params (str, optional): The initialization method to use. Options are
the same as in sklearn.mixture.GaussianMixture plus one addition,
"confusion". If "confusion", the clusters are initialized such that almost
all of the examples in a cluster come from same cell in the confusion
matrix. See Notes below for more details. Defaults to "confusion".
confusion_noise (float, optional): Only used if ``init_params="confusion"``.
The scale of noise added to the confusion matrix initialization. See notes
below for more details.
Defaults to 0.001.
Notes
-----
The mixture model is an extension of a standard Gaussian Mixture Model. The model is
based on the assumption that data is generated according to the following generative
process.
* Each example belongs to one of :math:`\bar{k}` slices. This slice
:math:`S` is sampled from a categorical
distribution :math:`S \sim Cat(\mathbf{p}_S)` with parameter :math:`\mathbf{p}_S
\in\{\mathbf{p} \in \mathbb{R}_+^{\bar{k}} : \sum_{i = 1}^{\bar{k}} p_i = 1\}`
(see ``DominoSDM.mm.weights_``).
* Given the slice :math:`S'`, the embeddings are normally distributed
:math:`Z | S \sim \mathcal{N}(\mathbf{\mu}, \mathbf{\Sigma}`) with parameters
mean :math:`\mathbf{\mu} \in \mathbb{R}^d` (see ``DominoSDM.mm.means_``) and
:math:`\mathbf{\Sigma} \in \mathbb{S}^{d}_{++}`
(see ``DominoSDM.mm.covariances_``;
normally this parameter is constrained to the set of symmetric positive definite
:math:`d \\times d` matrices, however the argument ``covariance_type`` allows for
other constraints).
* Given the slice, the labels vary as a categorical
:math:`Y |S \sim Cat(\mathbf{p})` with parameter :math:`\mathbf{p}
\in \{\mathbf{p} \in \mathbb{R}^c_+ : \sum_{i = 1}^c p_i = 1\}` (see
``DominoSDM.mm.y_probs``).
* Given the slice, the model predictions also vary as a categorical
:math:`\hat{Y} | S \sim Cat(\mathbf{\hat{p}})` with parameter
:math:`\mathbf{\hat{p}} \in \{\mathbf{\hat{p}} \in \mathbb{R}^c_+ :
\sum_{i = 1}^c \hat{p}_i = 1\}` (see ``DominoSDM.mm.y_hat_probs``).
The mixture model is, thus, parameterized by :math:`\phi = [\mathbf{p}_S, \mu,
\Sigma, \mathbf{p}, \mathbf{\hat{p}}]` corresponding to the attributes
``weights_, means_, covariances_, y_probs, y_hat_probs`` respectively. The
log-likelihood over the :math:`n` examples in the validation dataset :math:`D_v` is
given as followsand maximized using expectation-maximization:
.. math::
\ell(\phi) = \sum_{i=1}^n \log \sum_{s=1}^{\hat{k}} P(S=s)P(Z=z_i| S=s)
P( Y=y_i| S=s)P(\hat{Y} = h_\theta(x_i) | S=s)
We include two optional hyperparameters
:math:`\gamma, \hat{\gamma} \in \mathbb{R}_+`
(see ``y_log_liklihood_weight`` and ``y_hat_log_likelihood_weight`` below) that
balance the importance of modeling the class labels and predictions against the
importance of modeling the embedding. The modified log-likelihood over :math:`n`
examples is given as follows:
.. math::
\ell(\phi) = \sum_{i=1}^n \log \sum_{s=1}^{\hat{k}} P(S=s)P(Z=z_i| S=s)
P( Y=y_i| S=s)^\gamma P(\hat{Y} = h_\theta(x_i) | S=s)^{\hat{\gamma}}
.. attention::
Although we model the prediction :math:`\hat{Y}` as a categorical random
variable, in practice predictions are sometimes "soft" (e.g. the output
of a softmax layer is a probability distribution over labels, not a single
label). In these cases, the prediction :math:`\hat{Y}` is technically a
dirichlet random variable (i.e. a distribution over distributions).
However, to keep the implementation simple while still leveraging the extra
information provided by "soft" predictions, we naïvely plug the "soft"
predictions directly into the categorical PMF in the E-step and the update in
the M-step. Specifically, during the E-step, instead of computing the
categorical PMF :math:`P(\hat{Y}=\hat{y_i} | S=s)` we compute
:math:`\sum_{j=1}^c \hat{y_i}(j) P(\hat{Y}=j | S=s)` where :math:`\hat{y_i}(j)`
is the "soft" prediction for class :math:`j` (we can
think of this like we're marginalizing out the uncertainty in the prediction).
During the M-step, we compute a "soft" update for the categorical parameters
:math:`p_j^{(s)} = \sum_{i=1}^n Q(s,i) \hat{y_i}(j)` where :math:`Q(s,i)`
is the "responsibility" of slice :math:`s` towards the data point :math:`i`.
When using ``"confusion"`` initialization, each slice $s^{(j)}$ is assigned a
:math:`y^{(j)}\in \mathcal{Y}` and :math:`\hat{y}^{(j)} \in \mathcal{Y}` (*i.e.*
each slice is assigned a cell in the confusion matrix). This is typically done in a
round-robin fashion so that there are at least
:math:`\floor{\hat{k} / {|\mathcal{Y}|^2}}`
slices assigned to each cell in the confusion matrix. Then, we fill in the initial
responsibility matrix :math:`Q \in \mathbb{R}^{n \times \hat{k}}`, where each cell
:math:`Q_{ij}` corresponds to our model's initial estimate of
:math:`P(S=s^{(j)}|Y=y_i,
\hat{Y}=\hat{y}_i)`. We do this according to
.. math::
\bar{Q}_{ij} \leftarrow
\begin{cases}
1 + \epsilon & y_i=y^{(j)} \land \hat{y}_i = \hat{y}^{(j)} \\
\epsilon & \text{otherwise}
\end{cases}
.. math::
Q_{ij} \leftarrow \frac{\bar{Q}_{ij} } {\sum_{l=1}^{\hat{k}} \bar{Q}_{il}}
where :math:`\epsilon` is random noise which ensures that slices assigned to the
same confusion matrix cell won't have the exact same initialization. We sample
:math:`\epsilon` uniformly from the range ``(0, confusion_noise]``.
"""
def __init__(
self,
n_slices: int = 5,
covariance_type: str = "diag",
n_pca_components: Union[int, None] = 128,
n_mixture_components: int = 25,
y_log_likelihood_weight: float = 1,
y_hat_log_likelihood_weight: float = 1,
max_iter: int = 100,
init_params: str = "confusion",
confusion_noise: float = 1e-3,
):
super().__init__(n_slices=n_slices)
self.config.covariance_type = covariance_type
self.config.n_pca_components = n_pca_components
self.config.n_mixture_components = n_mixture_components
self.config.init_params = init_params
self.config.confusion_noise = confusion_noise
self.config.y_log_likelihood_weight = y_log_likelihood_weight
self.config.y_hat_log_likelihood_weight = y_hat_log_likelihood_weight
self.config.max_iter = max_iter
if self.config.n_pca_components is None:
self.pca = None
else:
self.pca = PCA(n_components=self.config.n_pca_components)
self.mm = DominoMixture(
n_components=self.config.n_mixture_components,
reg_covar=1e-6,
y_log_likelihood_weight=self.config.y_log_likelihood_weight,
y_hat_log_likelihood_weight=self.config.y_hat_log_likelihood_weight,
covariance_type=self.config.covariance_type,
init_params=self.config.init_params,
max_iter=self.config.max_iter,
confusion_noise=self.config.confusion_noise,
)
def fit(
self,
data: Union[dict, mk.DataPanel] = None,
embeddings: Union[str, np.ndarray] = "embedding",
targets: Union[str, np.ndarray] = "target",
pred_probs: Union[str, np.ndarray] = "pred_probs",
) -> DominoSlicer:
"""
Fit the mixture model to data.
Args:
data (mk.DataPanel, optional): A `Meerkat DataPanel` with columns for
embeddings, targets, and prediction probabilities. The names of the
columns can be specified with the ``embeddings``, ``targets``, and
``pred_probs`` arguments. Defaults to None.
embeddings (Union[str, np.ndarray], optional): The name of a colum in
``data`` holding embeddings. If ``data`` is ``None``, then an np.ndarray
of shape (n_samples, dimension of embedding). Defaults to
"embedding".
targets (Union[str, np.ndarray], optional): The name of a column in
``data`` holding class labels. If ``data`` is ``None``, then an
np.ndarray of shape (n_samples,). Defaults to "target".
pred_probs (Union[str, np.ndarray], optional): The name of
a column in ``data`` holding model predictions (can either be "soft"
probability scores or "hard" 1-hot encoded predictions). If
``data`` is ``None``, then an np.ndarray of shape (n_samples, n_classes)
or (n_samples,) in the binary case. Defaults to "pred_probs".
Returns:
DominoSDM: Returns a fit instance of DominoSDM.
"""
embeddings, targets, pred_probs = unpack_args(
data, embeddings, targets, pred_probs
)
# np.stack(np.asarray(embeddings))
if self.pca is not None:
self.pca.fit(X=embeddings)
embeddings = self.pca.transform(X=embeddings)
self.mm.fit(X=embeddings, y=targets, y_hat=pred_probs)
if self.mm.y_hat_probs is not None and self.mm.y_probs is not None:
self.slice_cluster_indices = (
-np.abs((self.mm.y_hat_probs - self.mm.y_probs).max(axis=1))
).argsort()[: self.config.n_slices]
elif self.mm.y_hat_probs is not None:
# Return slices in the order of highest probability p(y_pred|slice)
self.slice_cluster_indices = (
-np.abs((self.mm.y_hat_probs).max(axis=1))
).argsort()[: self.config.n_slices]
else:
self.slice_cluster_indices = np.arange(self.config.n_slices)
return self
def transform(
self,
data: Union[dict, mk.DataPanel] = None,
embeddings: Union[str, np.ndarray] = "embedding",
targets: Union[str, np.ndarray] = "target",
pred_probs: Union[str, np.ndarray] = "pred_probs",
) -> np.ndarray:
"""
Estimate slice membership for data using a fit mixture model.
.. caution::
Must call ``DominoSDM.fit`` prior to calling ``DominoSDM.transform``.
Args:
data (mk.DataPanel, optional): A `Meerkat DataPanel` with columns for
embeddings, targets, and prediction probabilities. The names of the
columns can be specified with the ``embeddings``, ``targets``, and
``pred_probs`` arguments. Defaults to None.
embeddings (Union[str, np.ndarray], optional): The name of a colum in
``data`` holding embeddings. If ``data`` is ``None``, then an np.ndarray
of shape (n_samples, dimension of embedding). Defaults to
"embedding".
targets (Union[str, np.ndarray], optional): The name of a column in
``data`` holding class labels. If ``data`` is ``None``, then an
np.ndarray of shape (n_samples,). Defaults to "target".
pred_probs (Union[str, np.ndarray], optional): The name of
a column in ``data`` holding model predictions (can either be "soft"
probability scores or "hard" 1-hot encoded predictions). If
``data`` is ``None``, then an np.ndarray of shape (n_samples, n_classes)
or (n_samples,) in the binary case. Defaults to "pred_probs".
Returns:
np.ndarray: A ``np.ndarray`` of shape (n_samples, n_slices).
"""
embeddings, targets, pred_probs = unpack_args(
data, embeddings, targets, pred_probs
)
if self.pca is not None:
embeddings = self.pca.transform(X=embeddings)
clusters = self.mm.predict_proba(embeddings, y=targets, y_hat=pred_probs)
return clusters[:, self.slice_cluster_indices]
class DominoMixture(GaussianMixture):
@wraps(GaussianMixture.__init__)
def __init__(
self,
*args,
y_log_likelihood_weight: float = 1,
y_hat_log_likelihood_weight: float = 1,
confusion_noise: float = 1e-3,
**kwargs,
):
self.y_log_likelihood_weight = y_log_likelihood_weight
self.y_hat_log_likelihood_weight = y_hat_log_likelihood_weight
self.confusion_noise = confusion_noise
super().__init__(*args, **kwargs)
def _initialize_parameters(self, X, y, y_hat, random_state):
"""Initialize the model parameters.
Parameters
----------
X : array-like of shape (n_samples, n_features)
random_state : RandomState
A random number generator instance that controls the random seed
used for the method chosen to initialize the parameters.
"""
n_samples, _ = X.shape
if self.init_params == "kmeans":
resp = np.zeros((n_samples, self.n_components))
label = (
cluster.KMeans(
n_clusters=self.n_components, n_init=1, random_state=random_state
)
.fit(X)
.labels_
)
resp[np.arange(n_samples), label] = 1
elif self.init_params == "random":
resp = random_state.rand(n_samples, self.n_components)
resp /= resp.sum(axis=1)[:, np.newaxis]
elif self.init_params == "confusion":
num_classes = y.shape[-1]
if self.n_components < num_classes ** 2:
raise ValueError(
"Can't use parameter init 'error' when "
"`n_components` < `num_classes **2`"
)
resp = np.matmul(y[:, :, np.newaxis], y_hat[:, np.newaxis, :]).reshape(
len(y), -1
)
resp = np.concatenate(
[resp]
* (
int(self.n_components / (num_classes ** 2))
+ (self.n_components % (num_classes ** 2) > 0)
),
axis=1,
)[:, : self.n_components] # This is basically repeating the confusuon matrix howmany ever times needed to fill up num_components.
resp /= resp.sum(axis=1)[:, np.newaxis]
resp += (
random_state.rand(n_samples, self.n_components) * self.confusion_noise
)
resp /= resp.sum(axis=1)[:, np.newaxis]
else:
raise ValueError(
"Unimplemented initialization method '%s'" % self.init_params
)
self._initialize(X, y, y_hat, resp)
#print(self.y_probs[:, 0].sum()) # Removing to support different types of clustering.
def _initialize(self, X, y, y_hat, resp):
"""Initialization of the Gaussian mixture parameters.
Parameters
----------
X : array-like of shape (n_samples, n_features)
resp : array-like of shape (n_samples, n_components)
"""
n_samples, _ = X.shape
weights, means, covariances, y_probs, y_hat_probs = _estimate_parameters(
X, y, y_hat, resp, self.reg_covar, self.covariance_type
)
weights /= n_samples
self.weights_ = weights if self.weights_init is None else self.weights_init
self.means_ = means if self.means_init is None else self.means_init
self.y_probs, self.y_hat_probs = y_probs, y_hat_probs
if self.precisions_init is None:
self.covariances_ = covariances
self.precisions_cholesky_ = _compute_precision_cholesky(
covariances, self.covariance_type
)
elif self.covariance_type == "full":
self.precisions_cholesky_ = np.array(
[
linalg.cholesky(prec_init, lower=True)
for prec_init in self.precisions_init
]
)
elif self.covariance_type == "tied":
self.precisions_cholesky_ = linalg.cholesky(
self.precisions_init, lower=True
)
else:
self.precisions_cholesky_ = self.precisions_init
def fit(self, X, y, y_hat):
self.fit_predict(X, y, y_hat)
return self
def _preprocess_ys(self, y: np.ndarray = None, y_hat: np.ndarray = None):
if y is not None:
y = label_binarize(y, classes=np.arange(np.max(y) + 1))
if y.shape[-1] == 1:
# binary targets transform to a column vector with label_binarize
y = np.array([1 - y[:, 0], y[:, 0]]).T
if y_hat is not None:
if len(y_hat.shape) == 1:
y_hat = np.array([1 - y_hat, y_hat]).T
return y, y_hat
def fit_predict(self, X, y, y_hat):
y, y_hat = self._preprocess_ys(y, y_hat)
X = _check_X(X, self.n_components, ensure_min_samples=2)
self._check_n_features(X, reset=True)
self._check_initial_parameters(X)
# if we enable warm_start, we will have a unique initialisation
do_init = not (self.warm_start and hasattr(self, "converged_")) #do_init is True.
n_init = self.n_init if do_init else 1 #This is set to 1.
max_lower_bound = -np.infty
self.converged_ = False
random_state = check_random_state(self.random_state)
n_samples, _ = X.shape
for init in range(n_init):
self._print_verbose_msg_init_beg(init)
if do_init:
self._initialize_parameters(X, y, y_hat, random_state)
lower_bound = -np.infty if do_init else self.lower_bound_
for n_iter in tqdm(range(1, self.max_iter + 1), colour="#f17a4a"):
prev_lower_bound = lower_bound
log_prob_norm, log_resp = self._e_step(X, y, y_hat)
self._m_step(X, y, y_hat, log_resp)
lower_bound = self._compute_lower_bound(log_resp, log_prob_norm)
change = lower_bound - prev_lower_bound
self._print_verbose_msg_iter_end(n_iter, change)
if abs(change) < self.tol:
self.converged_ = True
break
self._print_verbose_msg_init_end(lower_bound)
if lower_bound > max_lower_bound:
max_lower_bound = lower_bound
best_params = self._get_parameters()
best_n_iter = n_iter
if not self.converged_:
warnings.warn(
"Initialization %d did not converge. "
"Try different init parameters, "
"or increase max_iter, tol "
"or check for degenerate data." % (init + 1),
ConvergenceWarning,
)
self._set_parameters(best_params)
self.n_iter_ = best_n_iter
self.lower_bound_ = max_lower_bound
# Always do a final e-step to guarantee that the labels returned by
# fit_predict(X) are always consistent with fit(X).predict(X)
# for any value of max_iter and tol (and any random_state).
_, log_resp = self._e_step(X, y, y_hat)
return log_resp.argmax(axis=1)
def predict_proba(
self, X: np.ndarray, y: np.ndarray = None, y_hat: np.ndarray = None
):
y, y_hat = self._preprocess_ys(y, y_hat)
check_is_fitted(self)
X = _check_X(X, None, self.means_.shape[1])
_, log_resp = self._estimate_log_prob_resp(X, y, y_hat)
return np.exp(log_resp)
def _m_step(self, X, y, y_hat, log_resp):
"""M step.
Parameters
----------
X : array-like of shape (n_samples, n_features)
log_resp : array-like of shape (n_samples, n_components)
Logarithm of the posterior probabilities (or responsibilities) of
the point of each sample in X.
"""
resp = np.exp(log_resp)
n_samples, _ = X.shape
(
self.weights_,
self.means_,
self.covariances_,
self.y_probs,
self.y_hat_probs,
) = _estimate_parameters(
X, y, y_hat, resp, self.reg_covar, self.covariance_type
)
self.weights_ /= n_samples
self.precisions_cholesky_ = _compute_precision_cholesky(
self.covariances_, self.covariance_type
)
def _e_step(self, X, y, y_hat):
"""E step.
Parameters
----------
X : array-like of shape (n_samples, n_features)
Returns
-------
log_prob_norm : float
Mean of the logarithms of the probabilities of each sample in X
log_responsibility : array, shape (n_samples, n_components)
Logarithm of the posterior probabilities (or responsibilities) of
the point of each sample in X.
"""
log_prob_norm, log_resp = self._estimate_log_prob_resp(X, y, y_hat)
return np.mean(log_prob_norm), log_resp
def _estimate_log_prob_resp(self, X, y=None, y_hat=None):
"""Estimate log probabilities and responsibilities for each sample.
Compute the log probabilities, weighted log probabilities per
component and responsibilities for each sample in X with respect to
the current state of the model.
Parameters
----------
X : array-like of shape (n_samples, n_features)
Returns
-------
log_prob_norm : array, shape (n_samples,)
log p(X)
log_responsibilities : array, shape (n_samples, n_components)
logarithm of the responsibilities
"""
weighted_log_prob = self._estimate_weighted_log_prob(X, y, y_hat)
log_prob_norm = logsumexp(weighted_log_prob, axis=1)
with np.errstate(under="ignore"):
# ignore underflow
log_resp = weighted_log_prob - log_prob_norm[:, np.newaxis]
return log_prob_norm, log_resp
def _estimate_weighted_log_prob(self, X, y=None, y_hat=None):
log_prob = self._estimate_log_prob(X) + self._estimate_log_weights()
if y is not None:
log_prob += self._estimate_y_log_prob(y) * self.y_log_likelihood_weight
if y_hat is not None:
log_prob += (
self._estimate_y_hat_log_prob(y_hat) * self.y_hat_log_likelihood_weight
)
return log_prob
def _get_parameters(self):
return (
self.weights_,
self.means_,
self.covariances_,
self.y_probs,
self.y_hat_probs,
self.precisions_cholesky_,
)
def _set_parameters(self, params):
(
self.weights_,
self.means_,
self.covariances_,
self.y_probs,
self.y_hat_probs,
self.precisions_cholesky_,
) = params
# Attributes computation
_, n_features = self.means_.shape
if self.covariance_type == "full":
self.precisions_ = np.empty(self.precisions_cholesky_.shape)
for k, prec_chol in enumerate(self.precisions_cholesky_):
self.precisions_[k] = np.dot(prec_chol, prec_chol.T)
elif self.covariance_type == "tied":
self.precisions_ = np.dot(
self.precisions_cholesky_, self.precisions_cholesky_.T
)
else:
self.precisions_ = self.precisions_cholesky_ ** 2
def _n_parameters(self):
"""Return the number of free parameters in the model."""
return super()._n_parameters() + 2 * self.n_components
def _estimate_y_log_prob(self, y):
"""Estimate the Gaussian distribution parameters.
Parameters
----------
y: array-like of shape (n_samples, n_classes)
y_hat: array-like of shpae (n_samples, n_classes)
"""
# add epsilon to avoid "RuntimeWarning: divide by zero encountered in log"
return np.log(np.dot(y, self.y_probs.T) + np.finfo(self.y_probs.dtype).eps)
def _estimate_y_hat_log_prob(self, y_hat):
"""Estimate the Gaussian distribution parameters.
Parameters
----------
y: array-like of shape (n_samples, n_classes)
y_hat: array-like of shpae (n_samples, n_classes)
"""
# add epsilon to avoid "RuntimeWarning: divide by zero encountered in log"
return np.log(
np.dot(y_hat, self.y_hat_probs.T) + np.finfo(self.y_hat_probs.dtype).eps
)
def _estimate_parameters(X, y, y_hat, resp, reg_covar, covariance_type):
"""Estimate the Gaussian distribution parameters.
Parameters
----------
X : array-like of shape (n_samples, n_features)
The input data array.
y: array-like of shape (n_samples, n_classes)
y_hat: array-like of shpae (n_samples, n_classes)
resp : array-like of shape (n_samples, n_components)
The responsibilities for each data sample in X.
reg_covar : float
The regularization added to the diagonal of the covariance matrices.
covariance_type : {'full', 'tied', 'diag', 'spherical'}
The type of precision matrices.
Returns
-------
nk : array-like of shape (n_components,)
The numbers of data samples in the current components.
means : array-like of shape (n_components, n_features)
The centers of the current components.
covariances : array-like
The covariance matrix of the current components.
The shape depends of the covariance_type.
"""
nk = resp.sum(axis=0) + 10 * np.finfo(resp.dtype).eps # (n_components, )
means = np.dot(resp.T, X) / nk[:, np.newaxis]
covariances = {
"full": _estimate_gaussian_covariances_full,
"tied": _estimate_gaussian_covariances_tied,
"diag": _estimate_gaussian_covariances_diag,
"spherical": _estimate_gaussian_covariances_spherical,
}[covariance_type](resp, X, nk, means, reg_covar)
if y is not None:
y_probs = np.dot(resp.T, y) / nk[:, np.newaxis] # (n_components, n_classes)
else:
y_probs = None
if y_hat is not None:
y_hat_probs = np.dot(resp.T, y_hat) / nk[:, np.newaxis] # (n_components, n_classes)
else:
y_hat_probs = None
return nk, means, covariances, y_probs, y_hat_probs
| 30,667 | 39.405797 | 141 | py |
robust-transformers | robust-transformers-main/examples/pytorch/slice-discovery/error_aware_slice_discovery.py | # load for each fold of training data, corresponding model, pretrained model and split out Ypred, Y
# Combine all that data and create 6 folds.
# For Dev set, do something similar, but now, the strategy for worst -group selection criterion is different. Recombining some of the low error groups together by class, creates a distribution similar to what was used in clean partitioning.
#!/usr/bin/env python
# coding=utf-8
"""
Code to create feature representations for instances of a text classification task, for automatic spurious-feature slice-discovery.
Supported Feature types:
Given a model path (pretrained or finetuned), return
* CLS
* Maxpool representations
Given two model representations (pretrained and finetunde, both), return:
* Difference in CLS representations.
"""
from copyreg import pickle
from fileinput import filename
import logging
import os
import random
import sys
from dataclasses import dataclass, field
# from this import d
from typing import Optional
import tqdm
import pickle
import datasets
import numpy as np
from datasets import load_dataset, load_metric
import meerkat as mk
import pandas as pd
from numpy import dot
from numpy.linalg import norm
import json
import torch
import transformers
from transformers import (
AutoConfig,
AutoModelForSequenceClassification,
AutoTokenizer,
CartographyDataCollatorWithPadding,
EvalPrediction,
HfArgumentParser,
PretrainedConfig,
TrainerDro,
TrainingArguments,
DroArguments,
cartography_data_collator,
set_seed,
)
from transformers.trainer_utils import get_last_checkpoint
from transformers.trainer_pt_utils import nested_numpify, nested_detach
from transformers.utils import check_min_version
from transformers.utils.versions import require_version
from domino_slicer import DominoMixture, DominoSlicer
logger = logging.getLogger(__name__)
task_to_keys = {
"cola": ("sentence", None),
"mnli": ("premise", "hypothesis"),
"mrpc": ("sentence1", "sentence2"),
"qnli": ("question", "sentence"),
"qqp": ("question1", "question2"),
"rte": ("sentence1", "sentence2"),
"sst2": ("sentence", None),
"stsb": ("sentence1", "sentence2"),
"wanli": ("premise", "hypothesis"),
}
custom_task_to_keys = {
"mnli_resplit": ("sentence1", "sentence2"),
"wilds_civil_comments": ("sentence1", None),
"winogrande": ("sentence", None),
"sst2": ("sentence", None),
"fever": ("sentence1", "sentence2"),
"commonsenseqa": ("sentence1", "sentence2"),
"wanli": ("premise", "hypothesis"),
"qqp": ("sentence1", "sentence2"),
}
@dataclass
class DataTrainingArguments:
"""
Arguments pertaining to what data we are going to input our model for training and eval.
Using `HfArgumentParser` we can turn this class
into argparse arguments to be able to specify them on
the command line.
"""
y_log_likelihood_weight: float = field(
default=1.0,
metadata={"help": "Weight on reference class label (Y) of domino slicer."}
)
y_hat_log_likelihood_weight: float = field(
default=1.0,
metadata={"help": "Weight on predicted class label (Y hat) of domino slicer."}
)
output_file: str = field(
default=None,
metadata={"help": "output file to store newly re-grouped data."}
)
cluster_assgn_file: str = field(
default=None,
metadata={"help": "Path to error-aware cluster assignment file."}
)
kfold: int = field(
default=5,
metadata={"help": "number of kfolds."}
)
kfold_data_path_prefix: str = field(
default=None,
metadata={"help": "kfold data prefix."}
)
task_name: Optional[str] = field(
default=None,
metadata={"help": "The name of the task to train on: " + ", ".join(task_to_keys.keys())},
)
custom_task_name: Optional[str] = field(
default="mnli_resplit",
metadata={"help": "The name of the task to train on: " + ", ".join(task_to_keys.keys())},
)
dataset_name: Optional[str] = field(
default=None, metadata={"help": "The name of the dataset to use (via the datasets library)."}
)
dataset_config_name: Optional[str] = field(
default=None, metadata={"help": "The configuration name of the dataset to use (via the datasets library)."}
)
max_seq_length: int = field(
default=128,
metadata={
"help": "The maximum total input sequence length after tokenization. Sequences longer "
"than this will be truncated, sequences shorter will be padded."
},
)
overwrite_cache: bool = field(
default=False, metadata={"help": "Overwrite the cached preprocessed datasets or not."}
)
pad_to_max_length: bool = field(
default=True,
metadata={
"help": "Whether to pad all samples to `max_seq_length`. "
"If False, will pad the samples dynamically when batching to the maximum length in the batch."
},
)
max_train_samples: Optional[int] = field(
default=None,
metadata={
"help": "For debugging purposes or quicker training, truncate the number of training examples to this "
"value if set."
},
)
max_eval_samples: Optional[int] = field(
default=None,
metadata={
"help": "For debugging purposes or quicker training, truncate the number of evaluation examples to this "
"value if set."
},
)
max_predict_samples: Optional[int] = field(
default=None,
metadata={
"help": "For debugging purposes or quicker training, truncate the number of prediction examples to this "
"value if set."
},
)
train_file: Optional[str] = field(
default=None, metadata={"help": "A csv or a json file containing the training data."}
)
validation_file: Optional[str] = field(
default=None, metadata={"help": "A csv or a json file containing the validation data."}
)
test_file: Optional[str] = field(default=None, metadata={"help": "A csv or a json file containing the test data."})
create_features: Optional[bool] = field(
default=False, metadata={"help": "Create training and evaluation data features."}
)
find_spurious_features: Optional[bool] = field(
default=False, metadata={"help": "Use differences between pretrained and finetuned model to find pretrained features."}
)
cluster_dev_features: Optional[bool] = field(
default=False, metadata={"help": "Cluster evaluation data features."}
)
cluster_train_features: Optional[bool] = field(
default=False, metadata={"help": "Cluster training data features."}
)
cluster_all_features: Optional[bool] = field(
default=False, metadata={"help": "Cluster training and evaluation data features together."}
)
assign_train_groups: Optional[bool] = field(
default=False, metadata={"help": "Greedily Assign groups based on DOMINO membership."}
)
assign_all_groups: Optional[bool] = field(
default=False, metadata={"help": "Greedily Assign groups based on DOMINO membership, during training and evaluation."}
)
assign_dev_groups: Optional[bool] = field(
default=False, metadata={"help": "Assign groups based on DOMINO membership"}
)
n_slices: Optional[int] = field(default=10, metadata={"help": "number of error slices to analyze."})
n_mixture_components: Optional[int] = field(default=50, metadata={"help": "number of mixture components."})
init_type: Optional[str] = field(default="confusion", metadata={"help": "Type of initialization for Mixture model."})
include_ypred: Optional[bool] = field(
default=False, metadata={"help": "Included predicted class for train time filtering"}
)
def __post_init__(self):
if self.task_name is not None:
self.task_name = self.task_name.lower()
if self.task_name not in task_to_keys.keys():
raise ValueError("Unknown task, you should pick one in " + ",".join(task_to_keys.keys()))
elif self.dataset_name is not None:
pass
elif self.train_file is None or self.validation_file is None:
raise ValueError("Need either a GLUE task, a training/validation file or a dataset name.")
else:
train_extension = self.train_file.split(".")[-1]
assert train_extension in ["tsv", "csv", "json"], "`train_file` should be a csv or a json file."
validation_extension = self.validation_file.split(".")[-1]
assert (
validation_extension == train_extension
), "`validation_file` should have the same extension (csv or json) as `train_file`."
@dataclass
class ModelArguments:
"""
Arguments pertaining to which model/config/tokenizer we are going to fine-tune from.
"""
kfold_model_path_prefix: str = field(
metadata={"help": "Path to pretrained model or model identifier from huggingface.co/models"}
)
model_name_or_path: str = field(
metadata={"help": "Path to pretrained model or model identifier from huggingface.co/models"}
)
pretrained_model_name_or_path: str = field(
metadata={"help": "Path to pretrained model or model identifier from huggingface.co/models"}
)
config_name: Optional[str] = field(
default=None, metadata={"help": "Pretrained config name or path if not the same as model_name"}
)
tokenizer_name: Optional[str] = field(
default=None, metadata={"help": "Pretrained tokenizer name or path if not the same as model_name"}
)
cache_dir: Optional[str] = field(
default=None,
metadata={"help": "Where do you want to store the pretrained models downloaded from huggingface.co"},
)
use_fast_tokenizer: bool = field(
default=True,
metadata={"help": "Whether to use one of the fast tokenizer (backed by the tokenizers library) or not."},
)
model_revision: str = field(
default="main",
metadata={"help": "The specific model version to use (can be a branch name, tag name or commit id)."},
)
use_auth_token: bool = field(
default=False,
metadata={
"help": "Will use the token generated when running `transformers-cli login` (necessary to use this script "
"with private models)."
},
)
def create_features(model_args, training_args, trainer, dataloader, model, config, split, is_pretraining=False):
# eval_datalooader = trainer.g
total_train_batch_size = training_args.train_batch_size * training_args.gradient_accumulation_steps * training_args.world_size
num_examples = len(dataloader) # Number of batches.
logger.info("***** Running feature generation for training dataset *****")
logger.info(f" Num examples = {num_examples}")
logger.info(f" Instantaneous batch size per device = {training_args.per_device_train_batch_size}")
logger.info(f" Total train batch size (w. parallel, distributed & accumulation) = {total_train_batch_size}")
train_representations = np.array([], dtype='float32').reshape(0,model.config.hidden_size)
mean_train_representations = np.array([], dtype='float32').reshape(0,model.config.hidden_size)
all_contextual_representations = []
train_logits = np.array([], dtype='float32').reshape(0, config.num_labels)
train_labels = np.array([], dtype='float32').reshape(0)
train_guids = []
train_lengths = []
train_groups = np.array([], dtype='float32').reshape(0)
## creat a meerkat table.
for step, inputs in tqdm.tqdm(enumerate(dataloader)):
inputs = trainer._prepare_inputs(inputs)
with torch.no_grad():
with trainer.autocast_smart_context_manager():
#TODO: Remove non-tensorizable elements from inputs.
guid = inputs["guid"]
group = inputs["group"]
labels = inputs["labels"]
train_guids += guid
train_labels = np.concatenate((train_labels, nested_numpify(labels)), axis=0)
train_groups = np.concatenate((train_groups, nested_numpify(group)), axis=0)
del inputs["guid"]
del inputs["group"]
if "group_distribution" in inputs:
del inputs["group_distribution"]
inputs["output_hidden_states"] = True
outputs = model(**inputs)
"""
for batch_index, seq_length in enumerate(inputs["attention_mask"].sum(1)):
stacked_output = torch.vstack([outputs["hidden_states"][i][batch_index, :, :].unsqueeze(0) for i in range(model.config.num_hidden_layers + 1)]).cpu().numpy()
all_contextual_representations.append(stacked_output)
train_lengths.append(seq_length)
"""
last_hidden_layer = outputs["hidden_states"][-1]
classifier_representations = last_hidden_layer[:,0,:]
train_representations = np.concatenate((train_representations, nested_numpify(classifier_representations)), axis=0)
logits = outputs[1]
train_logits = np.concatenate((train_logits, nested_numpify(logits)), axis=0)
# Record predicted class as well.
"""
Meerkat DataPanel <https://github.com/robustness-gym/meerkat>`_ with columns
"emb", "target", and "pred_probs". After loading the DataPanel, you can discover
underperforming slices of the validation dataset with the following:
"""
dp = mk.DataPanel({
'guid': train_guids,
'group': train_groups,
'emb': train_representations,
# 'mean_pooled': mean_train_representations,
'target': train_labels,
'pred_probs': train_logits,
# 'all_hidden_states': all_contextual_representations,
# 'sequence_lengths': train_lengths
})
pd_df = mk.DataPanel.to_pandas(dp)
clustering_cache = os.path.join(training_args.output_dir, "clustering")
if not os.path.exists(clustering_cache):
os.mkdir(clustering_cache)
if not is_pretraining:
pd_df.to_pickle(os.path.join(training_args.output_dir, "clustering", "{0}.pkl".format(split)))
else:
pd_df.to_pickle(os.path.join(training_args.output_dir, "clustering", "{0}_pretrained.pkl".format(split)))
#return all_contextual_representations, train_lengths
def main():
parser = HfArgumentParser((ModelArguments, DataTrainingArguments, TrainingArguments, DroArguments))
model_args, data_args, training_args, dro_args = parser.parse_args_into_dataclasses()
# Setup logging
logging.basicConfig(
format="%(asctime)s - %(levelname)s - %(name)s - %(message)s",
datefmt="%m/%d/%Y %H:%M:%S",
handlers=[logging.StreamHandler(sys.stdout)],
)
log_level = training_args.get_process_log_level()
logger.setLevel(log_level)
datasets.utils.logging.set_verbosity(log_level)
transformers.utils.logging.set_verbosity(log_level)
transformers.utils.logging.enable_default_handler()
transformers.utils.logging.enable_explicit_format()
# Log on each process the small summary:
logger.warning(
f"Process rank: {training_args.local_rank}, device: {training_args.device}, n_gpu: {training_args.n_gpu}"
+ f"distributed training: {bool(training_args.local_rank != -1)}, 16-bits training: {training_args.fp16}"
)
logger.info(f"Training/evaluation parameters {training_args}")
# Set seed before initializing model.
set_seed(training_args.seed)
# Load tarining, validation and test data from file paths.
data_files = {"train": data_args.train_file, "validation": data_args.validation_file, "test": data_args.test_file}
if data_args.train_file.endswith(".csv"):
# Loading a dataset from local csv files
raw_datasets = load_dataset("csv", data_files=data_files, cache_dir=model_args.cache_dir)
else:
# Loading a dataset from local json files
raw_datasets = load_dataset("json", data_files=data_files, cache_dir=model_args.cache_dir)
# Labels
is_regression = raw_datasets["train"].features["label"].dtype in ["float32", "float64"]
if is_regression:
num_labels = 1
else:
# A useful fast method:
# https://huggingface.co/docs/datasets/package_reference/main_classes.html#datasets.Dataset.unique
label_list = raw_datasets["train"].unique("label")
label_list.sort() # Let's sort it for determinism
num_labels = len(label_list)
# Load pretrained model and tokenizer
#
# In distributed training, the .from_pretrained methods guarantee that only one local process can concurrently
# download model & vocab.
config = AutoConfig.from_pretrained(
model_args.config_name if model_args.config_name else model_args.model_name_or_path,
num_labels=num_labels,
finetuning_task=data_args.task_name,
cache_dir=model_args.cache_dir,
revision=model_args.model_revision,
use_auth_token=True if model_args.use_auth_token else None,
)
tokenizer = AutoTokenizer.from_pretrained(
model_args.tokenizer_name if model_args.tokenizer_name else model_args.model_name_or_path,
cache_dir=model_args.cache_dir,
use_fast=model_args.use_fast_tokenizer,
revision=model_args.model_revision,
use_auth_token=True if model_args.use_auth_token else None,
)
model = AutoModelForSequenceClassification.from_pretrained(
model_args.model_name_or_path,
from_tf=bool(".ckpt" in model_args.model_name_or_path),
config=config,
cache_dir=model_args.cache_dir,
revision=model_args.model_revision,
use_auth_token=True if model_args.use_auth_token else None,
)
pretrained_model = AutoModelForSequenceClassification.from_pretrained(
model_args.pretrained_model_name_or_path,
from_tf=bool(".ckpt" in model_args.model_name_or_path),
config=config,
cache_dir=model_args.cache_dir,
revision=model_args.model_revision,
use_auth_token=True if model_args.use_auth_token else None,
)
# Preprocessing the raw_datasets
# TODO:For amazon, sentence1_key is fixed as "text"
# sentence1_key, sentence2_key = "text", None
# Custom MNLI with group info
sentence1_key, sentence2_key = custom_task_to_keys[data_args.custom_task_name]
# Padding strategy
if data_args.pad_to_max_length:
padding = "max_length"
else:
# We will pad later, dynamically at batch creation, to the max sequence length in each batch
padding = False
# Handling Label to ID mapping
label_to_id = {v: i for i, v in enumerate(label_list)}
model.config.label2id = label_to_id
model.config.id2label = {id: label for label, id in config.label2id.items()}
# Max sequence length
if data_args.max_seq_length > tokenizer.model_max_length:
logger.warning(
f"The max_seq_length passed ({data_args.max_seq_length}) is larger than the maximum length for the"
f"model ({tokenizer.model_max_length}). Using max_seq_length={tokenizer.model_max_length}."
)
max_seq_length = min(data_args.max_seq_length, tokenizer.model_max_length)
def preprocess_function(examples):
# Tokenize the texts
args = (
(examples[sentence1_key],) if sentence2_key is None else (examples[sentence1_key], examples[sentence2_key])
)
result = tokenizer(*args, padding=padding, max_length=max_seq_length, truncation=True)
# Map labels to IDs (not necessary for GLUE tasks)
if label_to_id is not None and "label" in examples:
result["label"] = [(label_to_id[l] if l != -1 else -1) for l in examples["label"]]
result["guid"] = examples["guid"]
result["group"] = examples["group"]
return result
# Preprocess datasets.
if data_args.create_features:
with training_args.main_process_first(desc="dataset map pre-processing"):
raw_datasets = raw_datasets.map(
preprocess_function,
batched=True,
load_from_cache_file=not data_args.overwrite_cache,
desc="Running tokenizer on dataset",
)
train_dataset = raw_datasets["train"]
if data_args.max_train_samples is not None:
train_dataset = train_dataset.select(range(data_args.max_train_samples))
eval_dataset = raw_datasets["validation_matched" if data_args.task_name == "mnli" else "validation"]
if data_args.max_eval_samples is not None:
eval_dataset = eval_dataset.select(range(data_args.max_eval_samples))
predict_dataset = raw_datasets["test_matched" if data_args.task_name == "mnli" else "test"]
if data_args.max_predict_samples is not None:
predict_dataset = predict_dataset.select(range(data_args.max_predict_samples))
# Data collator.
if data_args.pad_to_max_length:
data_collator = cartography_data_collator
elif training_args.fp16:
data_collator = CartographyDataCollatorWithPadding(tokenizer, pad_to_multiple_of=8)
else:
data_collator = None
# Metrics?
metric = load_metric("accuracy")
# You can define your custom compute_metrics function. It takes an `EvalPrediction` object (a namedtuple with a
# predictions and label_ids field) and has to return a dictionary string to float.
def compute_metrics(p: EvalPrediction):
preds = p.predictions[0] if isinstance(p.predictions, tuple) else p.predictions
preds = np.squeeze(preds) if is_regression else np.argmax(preds, axis=1)
if data_args.task_name is not None:
result = metric.compute(predictions=preds, references=p.label_ids)
if len(result) > 1:
result["combined_score"] = np.mean(list(result.values())).item()
return result
elif is_regression:
return {"mse": ((preds - p.label_ids) ** 2).mean().item()}
else:
return {"accuracy": (preds == p.label_ids).astype(np.float32).mean().item()}
# Look at trainer init and init a trainer even here: easiest if initialized?
# Initialize our Trainer
if data_args.create_features:
# TODO: tweak code to create features for a bunch of folds at once.
trainer = TrainerDro(
model=model,
args=training_args,
dro_args=dro_args,
train_dataset=train_dataset,
eval_dataset=eval_dataset,
compute_metrics=compute_metrics,
tokenizer=tokenizer,
data_collator=data_collator,
)
train_dataloader = trainer.get_train_dataloader()
eval_dataloader = trainer.get_eval_dataloader(eval_dataset)
create_features(model_args, training_args, trainer, train_dataloader, model, config, split="train")
create_features(model_args, training_args, trainer, eval_dataloader, model, config, split="dev")
trainer = TrainerDro(
model=pretrained_model,
args=training_args,
dro_args=dro_args,
train_dataset=train_dataset,
eval_dataset=eval_dataset,
compute_metrics=compute_metrics,
tokenizer=tokenizer,
data_collator=data_collator,
)
train_dataloader = trainer.get_train_dataloader()
eval_dataloader = trainer.get_eval_dataloader(eval_dataset)
create_features(model_args, training_args, trainer, train_dataloader, pretrained_model, config, split="train", is_pretraining=True)
create_features(model_args, training_args, trainer, eval_dataloader, pretrained_model, config, split="dev", is_pretraining=True)
if data_args.cluster_train_features:
id_to_label = {v:k for k,v in label_to_id.items()}
split = "dev"
# Get json datasets from all split files of the training set.
# Load training, validation and test data from file paths.
kfold_data_prefix = data_args.kfold_data_path_prefix
kfold_model_prefix = model_args.kfold_model_path_prefix
filetype = "json"
train_files = [f"{kfold_data_prefix}{split_no}.{filetype}" for split_no in range(0, data_args.kfold)]
model_folders = [f"{kfold_model_prefix}{split_no}" for split_no in range(0, data_args.kfold)]
data_dict = {}
fold_dps = []
for fold_no, (train_file, model_path) in enumerate(zip(train_files, model_folders)):
data_files = {"train": train_file}
raw_datasets = load_dataset("json", data_files=data_files, cache_dir=model_args.cache_dir)
fold_dataset = raw_datasets["train"]
for ex in fold_dataset:
data_dict[ex["guid"]] = ex
fold_pd_df = pd.read_pickle(os.path.join(model_path, "clustering", "{0}.pkl".format(split)))
fold_logits = np.stack(fold_pd_df["pred_probs"].to_numpy())
fold_dps.append(mk.DataPanel({
'guid': fold_pd_df["guid"].to_list(),
'group': np.stack(fold_pd_df["group"].to_numpy()),
'emb': np.stack(fold_pd_df["emb"].to_numpy()),
'target': np.stack(fold_pd_df["target"].to_numpy()),
'pred_probs': np.asarray(torch.softmax(torch.tensor(fold_logits), dim=-1))
}))
comb_dp = mk.concat(fold_dps)
# y_hat_log_likelihood_weight may have to be up-played when slices are fewer and far between.
domino = DominoSlicer(n_slices=data_args.n_slices,
n_mixture_components=data_args.n_mixture_components,
init_params=data_args.init_type,
y_log_likelihood_weight=data_args.y_log_likelihood_weight,
y_hat_log_likelihood_weight=data_args.y_hat_log_likelihood_weight,
max_iter=200)
domino.fit(
data=comb_dp, embeddings="emb", targets="target", pred_probs="pred_probs"
)
# Save the domino class as a pickle
pickle.dump(domino, open(os.path.join(training_args.output_dir, "clustering", "error_aware_dominoclass_{0}_slices.pkl".format(data_args.n_slices)), "wb"))
comb_dp["domino_slices"] = domino.transform(
data=comb_dp, embeddings="emb", targets="target", pred_probs="pred_probs"
)
# also load pretrained features in the dataframe
pretrained_fold_dps = []
for fold_no, model_path in enumerate(model_folders):
fold_pd_df = pd.read_pickle(os.path.join(model_path, "clustering", "{0}_pretrained.pkl".format(split)))
pretrained_fold_dps.append(mk.DataPanel({
'guid': fold_pd_df["guid"].to_list(),
'pretrained_emb': np.stack(fold_pd_df["emb"].to_numpy()),
}))
pretrained_comb_dp = mk.concat(pretrained_fold_dps)
# Merge pretrained_comb_dp and comb_dp along guid column
merged_dp = comb_dp.merge(pretrained_comb_dp, on="guid")
pd_df = mk.DataPanel.to_pandas(merged_dp)
logger.info("***** Dumping group assingments for {0} to file *****".format(split))
pd_df.to_pickle(os.path.join(training_args.output_dir, "clustering", "error_aware_output_{0}_slices.pkl".format(data_args.n_slices)))
if data_args.cluster_dev_features:
split = "dev"
logger.info("***** Loading features for {0} dataset *****".format(split))
pd_df = pd.read_pickle(os.path.join(training_args.output_dir, "clustering", "{0}.pkl".format(split)))
logits = np.stack(pd_df["pred_probs"].to_numpy())
dp = mk.DataPanel({
'guid': pd_df["guid"].to_list(),
'group': np.stack(pd_df["group"].to_numpy()),
'emb': np.stack(pd_df["emb"].to_numpy()),
'target': np.stack(pd_df["target"].to_numpy()),
'pred_probs': np.asarray(torch.softmax(torch.tensor(logits), dim=-1))
})
domino = DominoSlicer(n_slices=data_args.n_slices, n_mixture_components=data_args.n_mixture_components, init_params=data_args.init_type, max_iter=200)
domino.fit(
data=dp, embeddings="emb", targets="target", pred_probs="pred_probs"
)
# Save the domino class as a pickle
pickle.dump(domino, open(os.path.join(training_args.output_dir, "clustering", "{0}_dominoclass_{1}_slices.pkl".format(split, data_args.n_slices)), "wb"))
dp["domino_slices"] = domino.transform(
data=dp, embeddings="emb", targets="target", pred_probs="pred_probs"
)
# also load pretrained features in the dataframe
pretrained_dp = pd.read_pickle(os.path.join(training_args.output_dir, "clustering", "{0}_pretrained.pkl".format(split)))
# make meerkat dataset
pretrained_dp = mk.DataPanel({
'guid': pretrained_dp["guid"].to_list(),
'pretrained_emb': np.stack(pretrained_dp["emb"].to_numpy()),
})
# Merge pretrained_comb_dp and comb_dp along guid column
merged_dp = dp.merge(pretrained_dp, on="guid")
# Save the domino object so that it be used to draw comparisons.
pd_df = mk.DataPanel.to_pandas(merged_dp)
logger.info("***** Dumping group assingments for {0} to file *****".format(split))
pd_df.to_pickle(os.path.join(training_args.output_dir, "clustering", "{0}_output_{1}_slices.pkl".format(split, data_args.n_slices)))
if data_args.cluster_all_features:
id_to_label = {v:k for k,v in label_to_id.items()}
split = "dev"
# Get json datasets from all split files of the training set.
# Load training, validation and test data from file paths.
kfold_data_prefix = data_args.kfold_data_path_prefix
kfold_model_prefix = model_args.kfold_model_path_prefix
filetype = "json"
train_files = [f"{kfold_data_prefix}{split_no}.{filetype}" for split_no in range(0, data_args.kfold)]
model_folders = [f"{kfold_model_prefix}{split_no}" for split_no in range(0, data_args.kfold)]
data_dict = {}
fold_dps = []
for fold_no, (train_file, model_path) in enumerate(zip(train_files, model_folders)):
data_files = {"train": train_file}
raw_datasets = load_dataset("json", data_files=data_files, cache_dir=model_args.cache_dir)
fold_dataset = raw_datasets["train"]
for ex in fold_dataset:
data_dict[ex["guid"]] = ex
fold_pd_df = pd.read_pickle(os.path.join(model_path, "clustering", "{0}.pkl".format(split)))
fold_logits = np.stack(fold_pd_df["pred_probs"].to_numpy())
fold_dps.append(mk.DataPanel({
'guid': fold_pd_df["guid"].to_list(),
'group': np.stack(fold_pd_df["group"].to_numpy()),
'emb': np.stack(fold_pd_df["emb"].to_numpy()),
'target': np.stack(fold_pd_df["target"].to_numpy()),
'pred_probs': np.asarray(torch.softmax(torch.tensor(fold_logits), dim=-1))
}))
# load dev set as well
dev_pd_df = pd.read_pickle(os.path.join(model_args.model_name_or_path, "clustering", "{0}.pkl".format(split)))
dev_logits = np.stack(dev_pd_df["pred_probs"].to_numpy())
fold_dps.append(mk.DataPanel({
'guid': dev_pd_df["guid"].to_list(),
'group': np.stack(dev_pd_df["group"].to_numpy()),
'emb': np.stack(dev_pd_df["emb"].to_numpy()),
'target': np.stack(dev_pd_df["target"].to_numpy()),
'pred_probs': np.asarray(torch.softmax(torch.tensor(dev_logits), dim=-1))
}))
comb_dp = mk.concat(fold_dps)
# y_hat_log_likelihood_weight may have to be up-played when slices are fewer and far between.
domino = DominoSlicer(n_slices=data_args.n_slices,
n_mixture_components=data_args.n_mixture_components,
init_params=data_args.init_type,
y_log_likelihood_weight=data_args.y_log_likelihood_weight,
y_hat_log_likelihood_weight=data_args.y_hat_log_likelihood_weight,
max_iter=200)
domino.fit(
data=comb_dp, embeddings="emb", targets="target", pred_probs="pred_probs"
)
# Save the domino class as a pickle
pickle.dump(domino, open(os.path.join(training_args.output_dir, "clustering", "combined_dominoclass_{0}_slices.pkl".format(data_args.n_slices)), "wb"))
comb_dp["domino_slices"] = domino.transform(
data=comb_dp, embeddings="emb", targets="target", pred_probs="pred_probs"
)
pd_df = mk.DataPanel.to_pandas(comb_dp)
logger.info("***** Dumping group assingments for {0} to file *****".format(split))
pd_df.to_pickle(os.path.join(training_args.output_dir, "clustering", "combined_output_{0}_slices.pkl".format(data_args.n_slices)))
if data_args.assign_train_groups:
pd_df = pd.read_pickle(data_args.cluster_assgn_file)
slices = np.stack(pd_df["domino_slices"].to_numpy())
# greedily assign the slice with highest probability.
group_assignment = {}
group_distributions = {}
for i in range(len(pd_df)):
## Usually analysis is done with group assignment only if value is above a threshold.
slice = int(np.argmax(pd_df.iloc[i]["domino_slices"]))
slice_val = np.max(pd_df.iloc[i]["domino_slices"])
chosen_slice = slice
guid = pd_df.iloc[i]["guid"]
group_distributions[guid] = list(pd_df.iloc[i]["domino_slices"])
group_assignment[guid] = chosen_slice
dataset = [json.loads(line) for line in open(data_args.train_file)]
split_by_label = False
with open(data_args.output_file, "w") as fout:
for ex in dataset:
guid = ex["guid"]
new_ex = ex
if split_by_label:
new_ex["group"] = 3*((group_assignment[guid])) + label_to_id[ex["label"]]
else:
new_ex["group"] = group_assignment[guid]
new_ex["group_distribution"] = group_distributions[guid]
fout.write(json.dumps(new_ex) + "\n")
if data_args.assign_dev_groups:
pd_df = pd.read_pickle(data_args.cluster_assgn_file)
slices = np.stack(pd_df["domino_slices"].to_numpy())
# greedily assign the slice with highest probability.
group_assignment = {}
group_distributions = {}
for i in range(len(pd_df)):
## Usually analysis is done with group assignment only if value is above a threshold.
slice = int(np.argmax(pd_df.iloc[i]["domino_slices"]))
slice_val = np.max(pd_df.iloc[i]["domino_slices"])
chosen_slice = slice
guid = pd_df.iloc[i]["guid"]
group_distributions[guid] = list(pd_df.iloc[i]["domino_slices"])
group_assignment[guid] = chosen_slice
dataset = [json.loads(line) for line in open(data_args.validation_file)]
split_by_label = False
with open(data_args.output_file, "w") as fout:
for ex in dataset:
guid = ex["guid"]
new_ex = ex
if split_by_label:
new_ex["group"] = 3*((group_assignment[guid])) + label_to_id[ex["label"]]
else:
new_ex["group"] = group_assignment[guid]
new_ex["group_distribution"] = group_distributions[guid]
fout.write(json.dumps(new_ex) + "\n")
if data_args.assign_all_groups:
pd_df = pd.read_pickle(data_args.cluster_assgn_file)
slices = np.stack(pd_df["domino_slices"].to_numpy())
group_assignment = {}
group_distributions = {}
for i in range(len(pd_df)):
## Usually analysis is done with group assignment only if value is above a threshold.
slice = int(np.argmax(pd_df.iloc[i]["domino_slices"]))
slice_val = np.max(pd_df.iloc[i]["domino_slices"])
chosen_slice = slice
guid = pd_df.iloc[i]["guid"]
group_distributions[guid] = list(pd_df.iloc[i]["domino_slices"])
group_assignment[guid] = chosen_slice
train_dataset = [json.loads(line) for line in open(data_args.train_file)]
validation_dataset = [json.loads(line) for line in open(data_args.validation_file)]
split_by_label = False
with open(data_args.output_file, "w") as fout:
for ex in train_dataset:
guid = ex["guid"]
new_ex = ex
if split_by_label:
new_ex["group"] = 3*((group_assignment[guid])) + label_to_id[ex["label"]]
else:
new_ex["group"] = group_assignment[guid]
new_ex["group_distribution"] = group_distributions[guid]
fout.write(json.dumps(new_ex) + "\n")
dev_output_file = data_args.output_file.replace("train", "dev")
with open(dev_output_file, "w") as fout:
for ex in validation_dataset:
guid = ex["guid"]
new_ex = ex
if split_by_label:
new_ex["group"] = 3*((group_assignment[guid])) + label_to_id[ex["label"]]
else:
new_ex["group"] = group_assignment[guid]
new_ex["group_distribution"] = group_distributions[guid]
fout.write(json.dumps(new_ex) + "\n")
if __name__ == "__main__":
main()
| 37,779 | 44.905225 | 240 | py |
robust-transformers | robust-transformers-main/examples/pytorch/slice-discovery/generate_pretrained_features.py | #!/usr/bin/env python
# coding=utf-8
"""
Code to create feature representations for instances of a text classification task, for automatic spurious-feature slice-discovery.
Supported Feature types:
Given a model path (pretrained or finetuned), return
* CLS
* Maxpool representations
Given two model representations (pretrained and finetunde, both), return:
* Difference in CLS representations.
"""
from copyreg import pickle
from fileinput import filename
import logging
import os
import random
import sys
from dataclasses import dataclass, field
from this import d
from typing import Optional
import tqdm
import pickle
import datasets
import numpy as np
from datasets import load_dataset, load_metric
import meerkat as mk
import pandas as pd
from numpy import dot
from numpy.linalg import norm
import torch
import transformers
from transformers import (
AutoConfig,
AutoModelForSequenceClassification,
AutoTokenizer,
CartographyDataCollatorWithPadding,
EvalPrediction,
HfArgumentParser,
PretrainedConfig,
TrainerDro,
TrainingArguments,
DroArguments,
cartography_data_collator,
set_seed,
)
from transformers.trainer_utils import get_last_checkpoint
from transformers.trainer_pt_utils import nested_numpify, nested_detach
from transformers.utils import check_min_version
from transformers.utils.versions import require_version
from domino_slicer import DominoMixture, DominoSlicer
logger = logging.getLogger(__name__)
task_to_keys = {
"cola": ("sentence", None),
"mnli": ("premise", "hypothesis"),
"mrpc": ("sentence1", "sentence2"),
"qnli": ("question", "sentence"),
"qqp": ("sentence1", "sentence2"),
"rte": ("sentence1", "sentence2"),
"sst2": ("sentence", None),
"stsb": ("sentence1", "sentence2"),
"wnli": ("sentence1", "sentence2"),
}
custom_task_to_keys = {
"mnli_resplit": ("sentence1", "sentence2"),
"wilds_civil_comments": ("sentence1", None),
"winogrande": ("sentence", None),
"commonsenseqa": ("sentence1", "sentence2"),
}
@dataclass
class DataTrainingArguments:
"""
Arguments pertaining to what data we are going to input our model for training and eval.
Using `HfArgumentParser` we can turn this class
into argparse arguments to be able to specify them on
the command line.
"""
task_name: Optional[str] = field(
default=None,
metadata={"help": "The name of the task to train on: " + ", ".join(task_to_keys.keys())},
)
custom_task_name: Optional[str] = field(
default="mnli_resplit",
metadata={"help": "The name of the task to train on: " + ", ".join(task_to_keys.keys())},
)
dataset_name: Optional[str] = field(
default=None, metadata={"help": "The name of the dataset to use (via the datasets library)."}
)
dataset_config_name: Optional[str] = field(
default=None, metadata={"help": "The configuration name of the dataset to use (via the datasets library)."}
)
max_seq_length: int = field(
default=128,
metadata={
"help": "The maximum total input sequence length after tokenization. Sequences longer "
"than this will be truncated, sequences shorter will be padded."
},
)
overwrite_cache: bool = field(
default=False, metadata={"help": "Overwrite the cached preprocessed datasets or not."}
)
pad_to_max_length: bool = field(
default=True,
metadata={
"help": "Whether to pad all samples to `max_seq_length`. "
"If False, will pad the samples dynamically when batching to the maximum length in the batch."
},
)
max_train_samples: Optional[int] = field(
default=None,
metadata={
"help": "For debugging purposes or quicker training, truncate the number of training examples to this "
"value if set."
},
)
max_eval_samples: Optional[int] = field(
default=None,
metadata={
"help": "For debugging purposes or quicker training, truncate the number of evaluation examples to this "
"value if set."
},
)
max_predict_samples: Optional[int] = field(
default=None,
metadata={
"help": "For debugging purposes or quicker training, truncate the number of prediction examples to this "
"value if set."
},
)
train_file: Optional[str] = field(
default=None, metadata={"help": "A csv or a json file containing the training data."}
)
validation_file: Optional[str] = field(
default=None, metadata={"help": "A csv or a json file containing the validation data."}
)
test_file: Optional[str] = field(default=None, metadata={"help": "A csv or a json file containing the test data."})
create_features: Optional[bool] = field(
default=False, metadata={"help": "Create training and evaluation data features."}
)
find_spurious_features: Optional[bool] = field(
default=False, metadata={"help": "Use differences between pretrained and finetuned model to find pretrained features."}
)
cluster_dev_features: Optional[bool] = field(
default=False, metadata={"help": "Cluster training and evaluation data features."}
)
cluster_train_features: Optional[bool] = field(
default=False, metadata={"help": "Cluster training and evaluation data features."}
)
n_slices: Optional[int] = field(default=10, metadata={"help": "number of error slices to analyze."})
n_mixture_components: Optional[int] = field(default=50, metadata={"help": "number of mixture components."})
init_type: Optional[str] = field(default="confusion", metadata={"help": "Type of initialization for Mixture model."})
include_ypred: Optional[bool] = field(
default=False, metadata={"help": "Included predicted class for train time filtering"}
)
def __post_init__(self):
if self.task_name is not None:
self.task_name = self.task_name.lower()
if self.task_name not in task_to_keys.keys():
raise ValueError("Unknown task, you should pick one in " + ",".join(task_to_keys.keys()))
elif self.dataset_name is not None:
pass
elif self.train_file is None or self.validation_file is None:
raise ValueError("Need either a GLUE task, a training/validation file or a dataset name.")
else:
train_extension = self.train_file.split(".")[-1]
assert train_extension in ["tsv", "csv", "json"], "`train_file` should be a csv or a json file."
validation_extension = self.validation_file.split(".")[-1]
assert (
validation_extension == train_extension
), "`validation_file` should have the same extension (csv or json) as `train_file`."
@dataclass
class ModelArguments:
"""
Arguments pertaining to which model/config/tokenizer we are going to fine-tune from.
"""
model_name_or_path: str = field(
metadata={"help": "Path to pretrained model or model identifier from huggingface.co/models"}
)
pretrained_model_name_or_path: str = field(
metadata={"help": "Path to pretrained model or model identifier from huggingface.co/models"}
)
config_name: Optional[str] = field(
default=None, metadata={"help": "Pretrained config name or path if not the same as model_name"}
)
tokenizer_name: Optional[str] = field(
default=None, metadata={"help": "Pretrained tokenizer name or path if not the same as model_name"}
)
cache_dir: Optional[str] = field(
default=None,
metadata={"help": "Where do you want to store the pretrained models downloaded from huggingface.co"},
)
use_fast_tokenizer: bool = field(
default=True,
metadata={"help": "Whether to use one of the fast tokenizer (backed by the tokenizers library) or not."},
)
model_revision: str = field(
default="main",
metadata={"help": "The specific model version to use (can be a branch name, tag name or commit id)."},
)
use_auth_token: bool = field(
default=False,
metadata={
"help": "Will use the token generated when running `transformers-cli login` (necessary to use this script "
"with private models)."
},
)
def create_features(training_args, trainer, dataloader, model, config, split, is_pretraining=False):
# eval_datalooader = trainer.g
total_train_batch_size = training_args.train_batch_size * training_args.gradient_accumulation_steps * training_args.world_size
num_examples = len(dataloader) # Number of batches.
logger.info("***** Running feature generation for training dataset *****")
logger.info(f" Num examples = {num_examples}")
logger.info(f" Instantaneous batch size per device = {training_args.per_device_train_batch_size}")
logger.info(f" Total train batch size (w. parallel, distributed & accumulation) = {total_train_batch_size}")
train_representations = np.array([], dtype='float32').reshape(0,model.config.hidden_size)
mean_train_representations = np.array([], dtype='float32').reshape(0,model.config.hidden_size)
all_contextual_representations = []
train_logits = np.array([], dtype='float32').reshape(0, config.num_labels)
train_labels = np.array([], dtype='float32').reshape(0)
train_guids = []
train_lengths = []
train_groups = np.array([], dtype='float32').reshape(0)
## creat a meerkat table.
for step, inputs in tqdm.tqdm(enumerate(dataloader)):
inputs = trainer._prepare_inputs(inputs)
with torch.no_grad():
with trainer.autocast_smart_context_manager():
#TODO: Remove non-tensorizable elements from inputs.
guid = inputs["guid"]
group = inputs["group"]
labels = inputs["labels"]
train_guids += guid
train_labels = np.concatenate((train_labels, nested_numpify(labels)), axis=0)
train_groups = np.concatenate((train_groups, nested_numpify(group)), axis=0)
del inputs["guid"]
del inputs["group"]
if "group_distribution" in inputs:
del inputs["group_distribution"]
inputs["output_hidden_states"] = True
outputs = model(**inputs)
"""
for batch_index, seq_length in enumerate(inputs["attention_mask"].sum(1)):
stacked_output = torch.vstack([outputs["hidden_states"][i][batch_index, :, :].unsqueeze(0) for i in range(model.config.num_hidden_layers + 1)]).cpu().numpy()
all_contextual_representations.append(stacked_output)
train_lengths.append(seq_length)
"""
last_hidden_layer = outputs["hidden_states"][-1]
classifier_representations = last_hidden_layer[:,0,:]
train_representations = np.concatenate((train_representations, nested_numpify(classifier_representations)), axis=0)
logits = outputs[1]
train_logits = np.concatenate((train_logits, nested_numpify(logits)), axis=0)
# Record predicted class as well.
"""
Dump a sample for isotropy measurements.
Sample 2*N token positions where i!=j. N=10K
Compute cosine, dump to file.
Get baseline consine values
"""
"""
N = 5000
X = []
Y = []
for i in range(2*N):
# Generate a sample
train_id = np.random.randint(len(train_guids))
# Generate tok_id
tok_id = np.random.randint(train_lengths[train_id].item())
X.append(all_contextual_representations[train_id][:, tok_id, :])
# Generate a sample
train_id = np.random.randint(len(train_guids))
# Generate tok_id
tok_id = np.random.randint(train_lengths[train_id].item())
Y.append(all_contextual_representations[train_id][:, tok_id, :])
consine_similarities_all_layers = []
for x, y in zip(X,Y):
cos_sim_all_layers = []
for i in range(model.config.num_hidden_layers+1):
cos_sim_all_layers.append(dot(x[i], y[i])/(norm(x[i])*norm(y[i])))
consine_similarities_all_layers.append(cos_sim_all_layers)
dp = mk.DataPanel({
'cosines': np.asarray(consine_similarities_all_layers)})
pd_df = mk.DataPanel.to_pandas(dp)
if not is_pretraining:
pd_df.to_pickle(os.path.join(training_args.output_dir, "clustering", "{0}_random_cosines.pkl".format(split)))
else:
pd_df.to_pickle(os.path.join(training_args.output_dir, "clustering", "{0}_random_cosines_pretrained.pkl".format(split)))
"""
"""
Meerkat DataPanel <https://github.com/robustness-gym/meerkat>`_ with columns
"emb", "target", and "pred_probs". After loading the DataPanel, you can discover
underperforming slices of the validation dataset with the following:
"""
dp = mk.DataPanel({
'guid': train_guids,
'group': train_groups,
'emb': train_representations,
# 'mean_pooled': mean_train_representations,
'target': train_labels,
'pred_probs': train_logits,
# 'all_hidden_states': all_contextual_representations,
# 'sequence_lengths': train_lengths
})
pd_df = mk.DataPanel.to_pandas(dp)
clustering_cache = os.path.join(training_args.output_dir, "clustering")
if not os.path.exists(clustering_cache):
os.mkdir(clustering_cache)
if not is_pretraining:
pd_df.to_pickle(os.path.join(training_args.output_dir, "clustering", "{0}.pkl".format(split)))
else:
pd_df.to_pickle(os.path.join(training_args.output_dir, "clustering", "{0}_pretrained.pkl".format(split)))
#return all_contextual_representations, train_lengths
def main():
parser = HfArgumentParser((ModelArguments, DataTrainingArguments, TrainingArguments, DroArguments))
model_args, data_args, training_args, dro_args = parser.parse_args_into_dataclasses()
# Setup logging
logging.basicConfig(
format="%(asctime)s - %(levelname)s - %(name)s - %(message)s",
datefmt="%m/%d/%Y %H:%M:%S",
handlers=[logging.StreamHandler(sys.stdout)],
)
log_level = training_args.get_process_log_level()
logger.setLevel(log_level)
datasets.utils.logging.set_verbosity(log_level)
transformers.utils.logging.set_verbosity(log_level)
transformers.utils.logging.enable_default_handler()
transformers.utils.logging.enable_explicit_format()
# Log on each process the small summary:
logger.warning(
f"Process rank: {training_args.local_rank}, device: {training_args.device}, n_gpu: {training_args.n_gpu}"
+ f"distributed training: {bool(training_args.local_rank != -1)}, 16-bits training: {training_args.fp16}"
)
logger.info(f"Training/evaluation parameters {training_args}")
# Set seed before initializing model.
set_seed(training_args.seed)
# Load tarining, validation and test data from file paths.
data_files = {"train": data_args.train_file, "validation": data_args.validation_file, "test": data_args.test_file}
if data_args.train_file.endswith(".csv"):
# Loading a dataset from local csv files
raw_datasets = load_dataset("csv", data_files=data_files, cache_dir=model_args.cache_dir)
else:
# Loading a dataset from local json files
raw_datasets = load_dataset("json", data_files=data_files, cache_dir=model_args.cache_dir)
# Labels
is_regression = raw_datasets["train"].features["label"].dtype in ["float32", "float64"]
if is_regression:
num_labels = 1
else:
# A useful fast method:
# https://huggingface.co/docs/datasets/package_reference/main_classes.html#datasets.Dataset.unique
label_list = raw_datasets["train"].unique("label")
label_list.sort() # Let's sort it for determinism
num_labels = len(label_list)
# Load pretrained model and tokenizer
#
# In distributed training, the .from_pretrained methods guarantee that only one local process can concurrently
# download model & vocab.
config = AutoConfig.from_pretrained(
model_args.config_name if model_args.config_name else model_args.model_name_or_path,
num_labels=num_labels,
finetuning_task=data_args.task_name,
cache_dir=model_args.cache_dir,
revision=model_args.model_revision,
use_auth_token=True if model_args.use_auth_token else None,
)
tokenizer = AutoTokenizer.from_pretrained(
model_args.tokenizer_name if model_args.tokenizer_name else model_args.model_name_or_path,
cache_dir=model_args.cache_dir,
use_fast=model_args.use_fast_tokenizer,
revision=model_args.model_revision,
use_auth_token=True if model_args.use_auth_token else None,
)
model = AutoModelForSequenceClassification.from_pretrained(
model_args.model_name_or_path,
from_tf=bool(".ckpt" in model_args.model_name_or_path),
config=config,
cache_dir=model_args.cache_dir,
revision=model_args.model_revision,
use_auth_token=True if model_args.use_auth_token else None,
)
pretrained_model = AutoModelForSequenceClassification.from_pretrained(
model_args.pretrained_model_name_or_path,
from_tf=bool(".ckpt" in model_args.model_name_or_path),
config=config,
cache_dir=model_args.cache_dir,
revision=model_args.model_revision,
use_auth_token=True if model_args.use_auth_token else None,
)
# Preprocessing the raw_datasets
# TODO:For amazon, sentence1_key is fixed as "text"
# sentence1_key, sentence2_key = "text", None
# Custom MNLI with group info
sentence1_key, sentence2_key = custom_task_to_keys[data_args.custom_task_name]
# Padding strategy
if data_args.pad_to_max_length:
padding = "max_length"
else:
# We will pad later, dynamically at batch creation, to the max sequence length in each batch
padding = False
# Handling Label to ID mapping
label_to_id = {v: i for i, v in enumerate(label_list)}
model.config.label2id = label_to_id
model.config.id2label = {id: label for label, id in config.label2id.items()}
# Max sequence length
if data_args.max_seq_length > tokenizer.model_max_length:
logger.warning(
f"The max_seq_length passed ({data_args.max_seq_length}) is larger than the maximum length for the"
f"model ({tokenizer.model_max_length}). Using max_seq_length={tokenizer.model_max_length}."
)
max_seq_length = min(data_args.max_seq_length, tokenizer.model_max_length)
def preprocess_function(examples):
# Tokenize the texts
args = (
(examples[sentence1_key],) if sentence2_key is None else (examples[sentence1_key], examples[sentence2_key])
)
result = tokenizer(*args, padding=padding, max_length=max_seq_length, truncation=True)
# Map labels to IDs (not necessary for GLUE tasks)
if label_to_id is not None and "label" in examples:
result["label"] = [(label_to_id[l] if l != -1 else -1) for l in examples["label"]]
result["guid"] = examples["guid"]
result["group"] = examples["group"]
return result
# Preprocess datasets.
if data_args.create_features:
with training_args.main_process_first(desc="dataset map pre-processing"):
raw_datasets = raw_datasets.map(
preprocess_function,
batched=True,
load_from_cache_file=not data_args.overwrite_cache,
desc="Running tokenizer on dataset",
)
train_dataset = raw_datasets["train"]
if data_args.max_train_samples is not None:
train_dataset = train_dataset.select(range(data_args.max_train_samples))
eval_dataset = raw_datasets["validation_matched" if data_args.task_name == "mnli" else "validation"]
if data_args.max_eval_samples is not None:
eval_dataset = eval_dataset.select(range(data_args.max_eval_samples))
predict_dataset = raw_datasets["test_matched" if data_args.task_name == "mnli" else "test"]
if data_args.max_predict_samples is not None:
predict_dataset = predict_dataset.select(range(data_args.max_predict_samples))
# Data collator.
if data_args.pad_to_max_length:
data_collator = cartography_data_collator
elif training_args.fp16:
data_collator = CartographyDataCollatorWithPadding(tokenizer, pad_to_multiple_of=8)
else:
data_collator = None
# Metrics?
metric = load_metric("accuracy")
# You can define your custom compute_metrics function. It takes an `EvalPrediction` object (a namedtuple with a
# predictions and label_ids field) and has to return a dictionary string to float.
def compute_metrics(p: EvalPrediction):
preds = p.predictions[0] if isinstance(p.predictions, tuple) else p.predictions
preds = np.squeeze(preds) if is_regression else np.argmax(preds, axis=1)
if data_args.task_name is not None:
result = metric.compute(predictions=preds, references=p.label_ids)
if len(result) > 1:
result["combined_score"] = np.mean(list(result.values())).item()
return result
elif is_regression:
return {"mse": ((preds - p.label_ids) ** 2).mean().item()}
else:
return {"accuracy": (preds == p.label_ids).astype(np.float32).mean().item()}
# Look at trainer init and init a trainer even here: easiest if initialized?
# Initialize our Trainer
if data_args.create_features:
trainer = TrainerDro(
model=model,
args=training_args,
dro_args=dro_args,
train_dataset=train_dataset,
eval_dataset=eval_dataset,
compute_metrics=compute_metrics,
tokenizer=tokenizer,
data_collator=data_collator,
)
train_dataloader = trainer.get_train_dataloader()
eval_dataloader = trainer.get_eval_dataloader(eval_dataset)
create_features(training_args, trainer, train_dataloader, model, config, split="train")
create_features(training_args, trainer, eval_dataloader, model, config, split="dev")
trainer = TrainerDro(
model=pretrained_model,
args=training_args,
dro_args=dro_args,
train_dataset=train_dataset,
eval_dataset=eval_dataset,
compute_metrics=compute_metrics,
tokenizer=tokenizer,
data_collator=data_collator,
)
train_dataloader = trainer.get_train_dataloader()
eval_dataloader = trainer.get_eval_dataloader(eval_dataset)
create_features(training_args, trainer, train_dataloader, pretrained_model, config, split="train", is_pretraining=True)
create_features(training_args, trainer, eval_dataloader, pretrained_model, config, split="dev", is_pretraining=True)
if data_args.cluster_dev_features:
id_to_label = {v:k for k,v in label_to_id.items()}
split = "dev"
logger.info("***** Loading features for {0} dataset *****".format(split))
pd_df = pd.read_pickle(os.path.join(training_args.output_dir, "clustering", "{0}.pkl".format(split)))
logits = np.stack(pd_df["pred_probs"].to_numpy())
pd_df_pretrained = pd.read_pickle(os.path.join(training_args.output_dir, "clustering", "{0}_pretrained.pkl".format(split)))
# Reuse current domino object only cluster by both pretrained and finetuned representation?
finetuned_emb = np.stack(pd_df["emb"].to_numpy())
pretrained_emb = np.stack(pd_df_pretrained["emb"].to_numpy())
concatenated_emb = np.concatenate((finetuned_emb, pretrained_emb), axis=1)
difference_emb = pretrained_emb - finetuned_emb
dp = mk.DataPanel({
'guid': pd_df["guid"].to_list(),
'group': np.stack(pd_df["group"].to_numpy()),
'emb': concatenated_emb,
'target': np.stack(pd_df["target"].to_numpy()),
'pred_probs': np.asarray(torch.softmax(torch.tensor(logits), dim=-1))
})
domino = DominoSlicer(n_slices=data_args.n_slices, n_mixture_components=data_args.n_mixture_components, init_params=data_args.init_type, max_iter=200)
domino.fit(
data=dp, embeddings="emb", targets="target", pred_probs="pred_probs"
)
# Save the domino class as a pickle
pickle.dump(domino, open(os.path.join(training_args.output_dir, "clustering", "{0}_dominoclass_{1}_slices_pretrained.pkl".format(split, data_args.n_slices)), "wb"))
dp["domino_slices"] = domino.transform(
data=dp, embeddings="emb", targets="target", pred_probs="pred_probs"
)
# Save the domino object so that it be used to draw comparisons.
pd_df = mk.DataPanel.to_pandas(dp)
logger.info("***** Dumping group assingments for {0} to file *****".format(split))
pd_df.to_pickle(os.path.join(training_args.output_dir, "clustering", "{0}_output_{1}_slices_pretrained.pkl".format(split, data_args.n_slices)))
logger.info("***** Dumping groups for exploration for {0} to file *****".format(split))
data_dict = {}
slices_dict = {i:[] for i in range(-1, data_args.n_slices)}
if split == "dev":
for ex in raw_datasets["validation"]:
data_dict[ex["guid"]] = ex
elif split == "train":
for ex in raw_datasets["train"]:
data_dict[ex["guid"]] = ex
for i in range(len(pd_df)):
## Usually analysis is done with group assignment only if value is above a threshold.
slice = int(np.argmax(pd_df.iloc[i]["domino_slices"]))
slice_val = np.max(pd_df.iloc[i]["domino_slices"])
if slice_val > 0.90:
chosen_slice = slice
else:
chosen_slice = -1
guid = pd_df.iloc[i]["guid"]
ex = data_dict[guid]
ex["prediction"] = id_to_label[np.argmax(pd_df.iloc[i]["pred_probs"])]
# Only look at slices that are actually erroneous
if not np.argmax(pd_df.iloc[i]["pred_probs"]) == pd_df.iloc[i]["target"]:
slices_dict[chosen_slice].append(ex)
with open(os.path.join(training_args.output_dir, "clustering", "{0}_analysis_{1}_slices_pretrained.txt".format(split, data_args.n_slices)), "w") as fout:
# ignore all examples that were assigned slice -1
for i in range(data_args.n_slices):
fout.write("Slice {0}\n".format(i))
for j, ex in enumerate(slices_dict[i]):
if data_args.custom_task_name == "mnli_resplit":
fout.write(str(j+1) + "\nPremise:" + ex["sentence1"] + "\nHypothesis:" + ex["sentence2"] + "\nGold:" + ex["label"] + "\nPrediction:" + ex["prediction"] + "\n")
elif data_args.custom_task_name == "wanli":
fout.write(str(j+1) + "\nPremise:" + ex["premise"] + "\nHypothesis:" + ex["hypothesis"] + "\nGold:" + ex["label"] + "\nPrediction:" + ex["prediction"] + "\n")
elif data_args.custom_task_name == "wilds_civil_comments":
fout.write(str(j+1) + "\Comment:" + ex["sentence1"] + "\nGold:" + ex["label"] + "\nPrediction:" + ex["prediction"] + "\n")
elif data_args.custom_task_name == "commonsenseqa":
fout.write(str(j+1) + "\n" + ex["sentence1"] + "\n" + ex["sentence2"] + "\nGold:" + str(ex["label"]) + "\nPrediction:" + str(ex["prediction"]) + "\n")
elif data_args.custom_task_name == "sst2":
fout.write(str(j+1) + "\nReview:" + ex["sentence"] + "\nGold:" + str(ex["label"]) + "\nPrediction:" + str(ex["prediction"]) + "\n")
elif data_args.custom_task_name == "qqp":
fout.write(str(j+1) + "\nQuestion1:" + ex["question1"] + "\nQuestion2:" + ex["question2"] + "\nGold:" + str(ex["label"]) + "\nPrediction:" + str(ex["prediction"]) + "\n")
fout.write("\n\n\n")
for i in range(-1, data_args.n_slices):
print(len(slices_dict[i]))
if __name__ == "__main__":
main()
| 28,557 | 44.330159 | 195 | py |
robust-transformers | robust-transformers-main/examples/pytorch/translation/run_translation_no_trainer.py | #!/usr/bin/env python
# coding=utf-8
# Copyright The HuggingFace Team and The HuggingFace Inc. team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
"""
Fine-tuning a 🤗 Transformers model on text translation.
"""
# You can also adapt this script on your own text translation task. Pointers for this are left as comments.
import argparse
import logging
import math
import os
import random
from pathlib import Path
import datasets
import numpy as np
import torch
from datasets import load_dataset, load_metric
from torch.utils.data import DataLoader
from tqdm.auto import tqdm
import transformers
from accelerate import Accelerator
from huggingface_hub import Repository
from transformers import (
CONFIG_MAPPING,
MODEL_MAPPING,
AdamW,
AutoConfig,
AutoModelForSeq2SeqLM,
AutoTokenizer,
DataCollatorForSeq2Seq,
MBartTokenizer,
MBartTokenizerFast,
SchedulerType,
default_data_collator,
get_scheduler,
set_seed,
)
from transformers.file_utils import get_full_repo_name
from transformers.utils.versions import require_version
logger = logging.getLogger(__name__)
require_version("datasets>=1.8.0", "To fix: pip install -r examples/pytorch/translation/requirements.txt")
# You should update this to your particular problem to have better documentation of `model_type`
MODEL_CONFIG_CLASSES = list(MODEL_MAPPING.keys())
MODEL_TYPES = tuple(conf.model_type for conf in MODEL_CONFIG_CLASSES)
# Parsing input arguments
def parse_args():
parser = argparse.ArgumentParser(description="Finetune a transformers model on a text classification task")
parser.add_argument(
"--dataset_name",
type=str,
default=None,
help="The name of the dataset to use (via the datasets library).",
)
parser.add_argument(
"--predict_with_generate",
type=bool,
default=True,
help="",
)
parser.add_argument(
"--dataset_config_name",
type=str,
default=None,
help="The configuration name of the dataset to use (via the datasets library).",
)
parser.add_argument(
"--train_file", type=str, default=None, help="A csv or a json file containing the training data."
)
parser.add_argument(
"--num_beams",
type=int,
default=None,
help="Number of beams to use for evaluation. This argument will be "
"passed to ``model.generate``, which is used during ``evaluate`` and ``predict``.",
)
parser.add_argument(
"--max_source_length",
type=int,
default=1024,
help="The maximum total input sequence length after "
"tokenization.Sequences longer than this will be truncated, sequences shorter will be padded.",
)
parser.add_argument(
"--max_target_length",
type=int,
default=128,
help="The maximum total sequence length for target text after "
"tokenization. Sequences longer than this will be truncated, sequences shorter will be padded."
"during ``evaluate`` and ``predict``.",
)
parser.add_argument(
"--val_max_target_length",
type=int,
default=None,
help="The maximum total sequence length for validation "
"target text after tokenization.Sequences longer than this will be truncated, sequences shorter will be "
"padded. Will default to `max_target_length`.This argument is also used to override the ``max_length`` "
"param of ``model.generate``, which is used during ``evaluate`` and ``predict``.",
)
parser.add_argument(
"--pad_to_max_length",
type=bool,
default=False,
help="Whether to pad all samples to model maximum sentence "
"length. If False, will pad the samples dynamically when batching to the maximum length in the batch. More"
"efficient on GPU but very bad for TPU.",
)
parser.add_argument(
"--validation_file", type=str, default=None, help="A csv or a json file containing the validation data."
)
parser.add_argument(
"--ignore_pad_token_for_loss",
type=bool,
default=True,
help="Whether to ignore the tokens corresponding to " "padded labels in the loss computation or not.",
)
parser.add_argument("--source_lang", type=str, default=None, help="Source language id for translation.")
parser.add_argument("--target_lang", type=str, default=None, help="Target language id for translation.")
parser.add_argument(
"--source_prefix",
type=str,
default=None,
help="A prefix to add before every source text " "(useful for T5 models).",
)
parser.add_argument(
"--preprocessing_num_workers",
type=int,
default=None,
help="The number of processes to use for the preprocessing.",
)
parser.add_argument(
"--overwrite_cache", type=bool, default=None, help="Overwrite the cached training and evaluation sets"
)
parser.add_argument(
"--max_length",
type=int,
default=128,
help=(
"The maximum total input sequence length after tokenization. Sequences longer than this will be truncated,"
" sequences shorter will be padded if `--pad_to_max_lengh` is passed."
),
)
parser.add_argument(
"--model_name_or_path",
type=str,
help="Path to pretrained model or model identifier from huggingface.co/models.",
required=True,
)
parser.add_argument(
"--config_name",
type=str,
default=None,
help="Pretrained config name or path if not the same as model_name",
)
parser.add_argument(
"--tokenizer_name",
type=str,
default=None,
help="Pretrained tokenizer name or path if not the same as model_name",
)
parser.add_argument(
"--use_slow_tokenizer",
action="store_true",
help="If passed, will use a slow tokenizer (not backed by the 🤗 Tokenizers library).",
)
parser.add_argument(
"--per_device_train_batch_size",
type=int,
default=8,
help="Batch size (per device) for the training dataloader.",
)
parser.add_argument(
"--per_device_eval_batch_size",
type=int,
default=8,
help="Batch size (per device) for the evaluation dataloader.",
)
parser.add_argument(
"--learning_rate",
type=float,
default=5e-5,
help="Initial learning rate (after the potential warmup period) to use.",
)
parser.add_argument("--weight_decay", type=float, default=0.0, help="Weight decay to use.")
parser.add_argument("--num_train_epochs", type=int, default=3, help="Total number of training epochs to perform.")
parser.add_argument(
"--max_train_steps",
type=int,
default=None,
help="Total number of training steps to perform. If provided, overrides num_train_epochs.",
)
parser.add_argument(
"--gradient_accumulation_steps",
type=int,
default=1,
help="Number of updates steps to accumulate before performing a backward/update pass.",
)
parser.add_argument(
"--lr_scheduler_type",
type=SchedulerType,
default="linear",
help="The scheduler type to use.",
choices=["linear", "cosine", "cosine_with_restarts", "polynomial", "constant", "constant_with_warmup"],
)
parser.add_argument(
"--num_warmup_steps", type=int, default=0, help="Number of steps for the warmup in the lr scheduler."
)
parser.add_argument("--output_dir", type=str, default=None, help="Where to store the final model.")
parser.add_argument("--seed", type=int, default=None, help="A seed for reproducible training.")
parser.add_argument(
"--model_type",
type=str,
default=None,
help="Model type to use if training from scratch.",
choices=MODEL_TYPES,
)
parser.add_argument("--push_to_hub", action="store_true", help="Whether or not to push the model to the Hub.")
parser.add_argument(
"--hub_model_id", type=str, help="The name of the repository to keep in sync with the local `output_dir`."
)
parser.add_argument("--hub_token", type=str, help="The token to use to push to the Model Hub.")
args = parser.parse_args()
# Sanity checks
if args.dataset_name is None and args.train_file is None and args.validation_file is None:
raise ValueError("Need either a task name or a training/validation file.")
if args.train_file is not None:
extension = args.train_file.split(".")[-1]
assert extension in ["csv", "json"], "`train_file` should be a csv or a json file."
if args.validation_file is not None:
extension = args.validation_file.split(".")[-1]
assert extension in ["csv", "json"], "`validation_file` should be a csv or a json file."
if args.push_to_hub:
assert args.output_dir is not None, "Need an `output_dir` to create a repo when `--push_to_hub` is passed."
return args
def main():
# Parse the arguments
args = parse_args()
# Initialize the accelerator. We will let the accelerator handle device placement for us in this example.
accelerator = Accelerator()
# Make one log on every process with the configuration for debugging.
logging.basicConfig(
format="%(asctime)s - %(levelname)s - %(name)s - %(message)s",
datefmt="%m/%d/%Y %H:%M:%S",
level=logging.INFO,
)
logger.info(accelerator.state)
# Setup logging, we only want one process per machine to log things on the screen.
# accelerator.is_local_main_process is only True for one process per machine.
logger.setLevel(logging.INFO if accelerator.is_local_main_process else logging.ERROR)
if accelerator.is_local_main_process:
datasets.utils.logging.set_verbosity_warning()
transformers.utils.logging.set_verbosity_info()
else:
datasets.utils.logging.set_verbosity_error()
transformers.utils.logging.set_verbosity_error()
# If passed along, set the training seed now.
if args.seed is not None:
set_seed(args.seed)
# Handle the repository creation
if accelerator.is_main_process:
if args.push_to_hub:
if args.hub_model_id is None:
repo_name = get_full_repo_name(Path(args.output_dir).name, token=args.hub_token)
else:
repo_name = args.hub_model_id
repo = Repository(args.output_dir, clone_from=repo_name)
elif args.output_dir is not None:
os.makedirs(args.output_dir, exist_ok=True)
accelerator.wait_for_everyone()
# Get the datasets: you can either provide your own CSV/JSON/TXT training and evaluation files (see below)
# or just provide the name of one of the public datasets available on the hub at https://huggingface.co/datasets/
# (the dataset will be downloaded automatically from the datasets Hub).
#
# For CSV/JSON files, this script will use the column called 'text' or the first column if no column called
# 'text' is found. You can easily tweak this behavior (see below).
#
# In distributed training, the load_dataset function guarantee that only one local process can concurrently
# download the dataset.
if args.dataset_name is not None:
# Downloading and loading a dataset from the hub.
raw_datasets = load_dataset(args.dataset_name, args.dataset_config_name)
else:
data_files = {}
if args.train_file is not None:
data_files["train"] = args.train_file
if args.validation_file is not None:
data_files["validation"] = args.validation_file
extension = args.train_file.split(".")[-1]
raw_datasets = load_dataset(extension, data_files=data_files)
# See more about loading any type of standard or custom dataset (from files, python dict, pandas DataFrame, etc) at
# https://huggingface.co/docs/datasets/loading_datasets.html.
# Load pretrained model and tokenizer
#
# In distributed training, the .from_pretrained methods guarantee that only one local process can concurrently
# download model & vocab.
if args.config_name:
config = AutoConfig.from_pretrained(args.model_name_or_path)
elif args.model_name_or_path:
config = AutoConfig.from_pretrained(args.model_name_or_path)
else:
config = CONFIG_MAPPING[args.model_type]()
logger.warning("You are instantiating a new config instance from scratch.")
if args.tokenizer_name:
tokenizer = AutoTokenizer.from_pretrained(args.tokenizer_name, use_fast=not args.use_slow_tokenizer)
elif args.model_name_or_path:
tokenizer = AutoTokenizer.from_pretrained(args.model_name_or_path, use_fast=not args.use_slow_tokenizer)
else:
raise ValueError(
"You are instantiating a new tokenizer from scratch. This is not supported by this script."
"You can do it from another script, save it, and load it from here, using --tokenizer_name."
)
if args.model_name_or_path:
model = AutoModelForSeq2SeqLM.from_pretrained(
args.model_name_or_path,
from_tf=bool(".ckpt" in args.model_name_or_path),
config=config,
)
else:
logger.info("Training new model from scratch")
model = AutoModelForSeq2SeqLM.from_config(config)
model.resize_token_embeddings(len(tokenizer))
# Set decoder_start_token_id
if model.config.decoder_start_token_id is None and isinstance(tokenizer, (MBartTokenizer, MBartTokenizerFast)):
assert (
args.target_lang is not None and args.source_lang is not None
), "mBart requires --target_lang and --source_lang"
if isinstance(tokenizer, MBartTokenizer):
model.config.decoder_start_token_id = tokenizer.lang_code_to_id[args.target_lang]
else:
model.config.decoder_start_token_id = tokenizer.convert_tokens_to_ids(args.target_lang)
if model.config.decoder_start_token_id is None:
raise ValueError("Make sure that `config.decoder_start_token_id` is correctly defined")
prefix = args.source_prefix if args.source_prefix is not None else ""
# Preprocessing the datasets.
# First we tokenize all the texts.
column_names = raw_datasets["train"].column_names
# For translation we set the codes of our source and target languages (only useful for mBART, the others will
# ignore those attributes).
if isinstance(tokenizer, (MBartTokenizer, MBartTokenizerFast)):
if args.source_lang is not None:
tokenizer.src_lang = args.source_lang
if args.target_lang is not None:
tokenizer.tgt_lang = args.target_lang
# Get the language codes for input/target.
source_lang = args.source_lang.split("_")[0]
target_lang = args.target_lang.split("_")[0]
padding = "max_length" if args.pad_to_max_length else False
# Temporarily set max_target_length for training.
max_target_length = args.max_target_length
padding = "max_length" if args.pad_to_max_length else False
def preprocess_function(examples):
inputs = [ex[source_lang] for ex in examples["translation"]]
targets = [ex[target_lang] for ex in examples["translation"]]
inputs = [prefix + inp for inp in inputs]
model_inputs = tokenizer(inputs, max_length=args.max_source_length, padding=padding, truncation=True)
# Setup the tokenizer for targets
with tokenizer.as_target_tokenizer():
labels = tokenizer(targets, max_length=max_target_length, padding=padding, truncation=True)
# If we are padding here, replace all tokenizer.pad_token_id in the labels by -100 when we want to ignore
# padding in the loss.
if padding == "max_length" and args.ignore_pad_token_for_loss:
labels["input_ids"] = [
[(l if l != tokenizer.pad_token_id else -100) for l in label] for label in labels["input_ids"]
]
model_inputs["labels"] = labels["input_ids"]
return model_inputs
with accelerator.main_process_first():
processed_datasets = raw_datasets.map(
preprocess_function,
batched=True,
num_proc=args.preprocessing_num_workers,
remove_columns=column_names,
load_from_cache_file=not args.overwrite_cache,
desc="Running tokenizer on dataset",
)
train_dataset = processed_datasets["train"]
eval_dataset = processed_datasets["validation"]
# Log a few random samples from the training set:
for index in random.sample(range(len(train_dataset)), 3):
logger.info(f"Sample {index} of the training set: {train_dataset[index]}.")
# DataLoaders creation:
label_pad_token_id = -100 if args.ignore_pad_token_for_loss else tokenizer.pad_token_id
if args.pad_to_max_length:
# If padding was already done ot max length, we use the default data collator that will just convert everything
# to tensors.
data_collator = default_data_collator
else:
# Otherwise, `DataCollatorWithPadding` will apply dynamic padding for us (by padding to the maximum length of
# the samples passed). When using mixed precision, we add `pad_to_multiple_of=8` to pad all tensors to multiple
# of 8s, which will enable the use of Tensor Cores on NVIDIA hardware with compute capability >= 7.5 (Volta).
data_collator = DataCollatorForSeq2Seq(
tokenizer,
model=model,
label_pad_token_id=label_pad_token_id,
pad_to_multiple_of=8 if accelerator.use_fp16 else None,
)
train_dataloader = DataLoader(
train_dataset, shuffle=True, collate_fn=data_collator, batch_size=args.per_device_train_batch_size
)
eval_dataloader = DataLoader(eval_dataset, collate_fn=data_collator, batch_size=args.per_device_eval_batch_size)
# Optimizer
# Split weights in two groups, one with weight decay and the other not.
no_decay = ["bias", "LayerNorm.weight"]
optimizer_grouped_parameters = [
{
"params": [p for n, p in model.named_parameters() if not any(nd in n for nd in no_decay)],
"weight_decay": args.weight_decay,
},
{
"params": [p for n, p in model.named_parameters() if any(nd in n for nd in no_decay)],
"weight_decay": 0.0,
},
]
optimizer = AdamW(optimizer_grouped_parameters, lr=args.learning_rate)
# Prepare everything with our `accelerator`.
model, optimizer, train_dataloader, eval_dataloader = accelerator.prepare(
model, optimizer, train_dataloader, eval_dataloader
)
# Note -> the training dataloader needs to be prepared before we grab his length below (cause its length will be
# shorter in multiprocess)
# Scheduler and math around the number of training steps.
num_update_steps_per_epoch = math.ceil(len(train_dataloader) / args.gradient_accumulation_steps)
if args.max_train_steps is None:
args.max_train_steps = args.num_train_epochs * num_update_steps_per_epoch
else:
args.num_train_epochs = math.ceil(args.max_train_steps / num_update_steps_per_epoch)
lr_scheduler = get_scheduler(
name=args.lr_scheduler_type,
optimizer=optimizer,
num_warmup_steps=args.num_warmup_steps,
num_training_steps=args.max_train_steps,
)
metric = load_metric("sacrebleu")
def postprocess_text(preds, labels):
preds = [pred.strip() for pred in preds]
labels = [[label.strip()] for label in labels]
return preds, labels
# Train!
total_batch_size = args.per_device_train_batch_size * accelerator.num_processes * args.gradient_accumulation_steps
logger.info("***** Running training *****")
logger.info(f" Num examples = {len(train_dataset)}")
logger.info(f" Num Epochs = {args.num_train_epochs}")
logger.info(f" Instantaneous batch size per device = {args.per_device_train_batch_size}")
logger.info(f" Total train batch size (w. parallel, distributed & accumulation) = {total_batch_size}")
logger.info(f" Gradient Accumulation steps = {args.gradient_accumulation_steps}")
logger.info(f" Total optimization steps = {args.max_train_steps}")
# Only show the progress bar once on each machine.
progress_bar = tqdm(range(args.max_train_steps), disable=not accelerator.is_local_main_process)
completed_steps = 0
for epoch in range(args.num_train_epochs):
model.train()
for step, batch in enumerate(train_dataloader):
outputs = model(**batch)
loss = outputs.loss
loss = loss / args.gradient_accumulation_steps
accelerator.backward(loss)
if step % args.gradient_accumulation_steps == 0 or step == len(train_dataloader) - 1:
optimizer.step()
lr_scheduler.step()
optimizer.zero_grad()
progress_bar.update(1)
completed_steps += 1
if completed_steps >= args.max_train_steps:
break
model.eval()
if args.val_max_target_length is None:
args.val_max_target_length = args.max_target_length
gen_kwargs = {
"max_length": args.val_max_target_length if args is not None else config.max_length,
"num_beams": args.num_beams,
}
for step, batch in enumerate(eval_dataloader):
with torch.no_grad():
generated_tokens = accelerator.unwrap_model(model).generate(
batch["input_ids"],
attention_mask=batch["attention_mask"],
**gen_kwargs,
)
generated_tokens = accelerator.pad_across_processes(
generated_tokens, dim=1, pad_index=tokenizer.pad_token_id
)
labels = batch["labels"]
if not args.pad_to_max_length:
# If we did not pad to max length, we need to pad the labels too
labels = accelerator.pad_across_processes(batch["labels"], dim=1, pad_index=tokenizer.pad_token_id)
generated_tokens = accelerator.gather(generated_tokens).cpu().numpy()
labels = accelerator.gather(labels).cpu().numpy()
if args.ignore_pad_token_for_loss:
# Replace -100 in the labels as we can't decode them.
labels = np.where(labels != -100, labels, tokenizer.pad_token_id)
decoded_preds = tokenizer.batch_decode(generated_tokens, skip_special_tokens=True)
decoded_labels = tokenizer.batch_decode(labels, skip_special_tokens=True)
decoded_preds, decoded_labels = postprocess_text(decoded_preds, decoded_labels)
metric.add_batch(predictions=decoded_preds, references=decoded_labels)
eval_metric = metric.compute()
logger.info({"bleu": eval_metric["score"]})
if args.push_to_hub and epoch < args.num_train_epochs - 1:
accelerator.wait_for_everyone()
unwrapped_model = accelerator.unwrap_model(model)
unwrapped_model.save_pretrained(args.output_dir, save_function=accelerator.save)
if accelerator.is_main_process:
tokenizer.save_pretrained(args.output_dir)
repo.push_to_hub(
commit_message=f"Training in progress epoch {epoch}", blocking=False, auto_lfs_prune=True
)
if args.output_dir is not None:
accelerator.wait_for_everyone()
unwrapped_model = accelerator.unwrap_model(model)
unwrapped_model.save_pretrained(args.output_dir, save_function=accelerator.save)
if accelerator.is_main_process:
tokenizer.save_pretrained(args.output_dir)
if args.push_to_hub:
repo.push_to_hub(commit_message="End of training", auto_lfs_prune=True)
if __name__ == "__main__":
main()
| 24,806 | 40.345 | 119 | py |
robust-transformers | robust-transformers-main/examples/pytorch/translation/run_translation.py | #!/usr/bin/env python
# coding=utf-8
# Copyright The HuggingFace Team and The HuggingFace Inc. team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
"""
Fine-tuning the library models for sequence to sequence.
"""
# You can also adapt this script on your own sequence to sequence task. Pointers for this are left as comments.
import logging
import os
import sys
from dataclasses import dataclass, field
from typing import Optional
import datasets
import numpy as np
from datasets import load_dataset, load_metric
import transformers
from transformers import (
AutoConfig,
AutoModelForSeq2SeqLM,
AutoTokenizer,
DataCollatorForSeq2Seq,
HfArgumentParser,
M2M100Tokenizer,
MBart50Tokenizer,
MBart50TokenizerFast,
MBartTokenizer,
MBartTokenizerFast,
Seq2SeqTrainer,
Seq2SeqTrainingArguments,
default_data_collator,
set_seed,
)
from transformers.trainer_utils import get_last_checkpoint
from transformers.utils import check_min_version
from transformers.utils.versions import require_version
# Will error if the minimal version of Transformers is not installed. Remove at your own risks.
check_min_version("4.18.0.dev0")
require_version("datasets>=1.8.0", "To fix: pip install -r examples/pytorch/translation/requirements.txt")
logger = logging.getLogger(__name__)
# A list of all multilingual tokenizer which require src_lang and tgt_lang attributes.
MULTILINGUAL_TOKENIZERS = [MBartTokenizer, MBartTokenizerFast, MBart50Tokenizer, MBart50TokenizerFast, M2M100Tokenizer]
@dataclass
class ModelArguments:
"""
Arguments pertaining to which model/config/tokenizer we are going to fine-tune from.
"""
model_name_or_path: str = field(
metadata={"help": "Path to pretrained model or model identifier from huggingface.co/models"}
)
config_name: Optional[str] = field(
default=None, metadata={"help": "Pretrained config name or path if not the same as model_name"}
)
tokenizer_name: Optional[str] = field(
default=None, metadata={"help": "Pretrained tokenizer name or path if not the same as model_name"}
)
cache_dir: Optional[str] = field(
default=None,
metadata={"help": "Where to store the pretrained models downloaded from huggingface.co"},
)
use_fast_tokenizer: bool = field(
default=True,
metadata={"help": "Whether to use one of the fast tokenizer (backed by the tokenizers library) or not."},
)
model_revision: str = field(
default="main",
metadata={"help": "The specific model version to use (can be a branch name, tag name or commit id)."},
)
use_auth_token: bool = field(
default=False,
metadata={
"help": "Will use the token generated when running `transformers-cli login` (necessary to use this script "
"with private models)."
},
)
@dataclass
class DataTrainingArguments:
"""
Arguments pertaining to what data we are going to input our model for training and eval.
"""
source_lang: str = field(default=None, metadata={"help": "Source language id for translation."})
target_lang: str = field(default=None, metadata={"help": "Target language id for translation."})
dataset_name: Optional[str] = field(
default=None, metadata={"help": "The name of the dataset to use (via the datasets library)."}
)
dataset_config_name: Optional[str] = field(
default=None, metadata={"help": "The configuration name of the dataset to use (via the datasets library)."}
)
train_file: Optional[str] = field(default=None, metadata={"help": "The input training data file (a jsonlines)."})
validation_file: Optional[str] = field(
default=None,
metadata={
"help": "An optional input evaluation data file to evaluate the metrics (sacreblue) on "
"a jsonlines file."
},
)
test_file: Optional[str] = field(
default=None,
metadata={
"help": "An optional input test data file to evaluate the metrics (sacreblue) on " "a jsonlines file."
},
)
overwrite_cache: bool = field(
default=False, metadata={"help": "Overwrite the cached training and evaluation sets"}
)
preprocessing_num_workers: Optional[int] = field(
default=None,
metadata={"help": "The number of processes to use for the preprocessing."},
)
max_source_length: Optional[int] = field(
default=1024,
metadata={
"help": "The maximum total input sequence length after tokenization. Sequences longer "
"than this will be truncated, sequences shorter will be padded."
},
)
max_target_length: Optional[int] = field(
default=128,
metadata={
"help": "The maximum total sequence length for target text after tokenization. Sequences longer "
"than this will be truncated, sequences shorter will be padded."
},
)
val_max_target_length: Optional[int] = field(
default=None,
metadata={
"help": "The maximum total sequence length for validation target text after tokenization. Sequences longer "
"than this will be truncated, sequences shorter will be padded. Will default to `max_target_length`."
"This argument is also used to override the ``max_length`` param of ``model.generate``, which is used "
"during ``evaluate`` and ``predict``."
},
)
pad_to_max_length: bool = field(
default=False,
metadata={
"help": "Whether to pad all samples to model maximum sentence length. "
"If False, will pad the samples dynamically when batching to the maximum length in the batch. More "
"efficient on GPU but very bad for TPU."
},
)
max_train_samples: Optional[int] = field(
default=None,
metadata={
"help": "For debugging purposes or quicker training, truncate the number of training examples to this "
"value if set."
},
)
max_eval_samples: Optional[int] = field(
default=None,
metadata={
"help": "For debugging purposes or quicker training, truncate the number of evaluation examples to this "
"value if set."
},
)
max_predict_samples: Optional[int] = field(
default=None,
metadata={
"help": "For debugging purposes or quicker training, truncate the number of prediction examples to this "
"value if set."
},
)
num_beams: Optional[int] = field(
default=None,
metadata={
"help": "Number of beams to use for evaluation. This argument will be passed to ``model.generate``, "
"which is used during ``evaluate`` and ``predict``."
},
)
ignore_pad_token_for_loss: bool = field(
default=True,
metadata={
"help": "Whether to ignore the tokens corresponding to padded labels in the loss computation or not."
},
)
source_prefix: Optional[str] = field(
default=None, metadata={"help": "A prefix to add before every source text (useful for T5 models)."}
)
forced_bos_token: Optional[str] = field(
default=None,
metadata={
"help": "The token to force as the first generated token after the :obj:`decoder_start_token_id`."
"Useful for multilingual models like :doc:`mBART <../model_doc/mbart>` where the first generated token "
"needs to be the target language token.(Usually it is the target language token)"
},
)
def __post_init__(self):
if self.dataset_name is None and self.train_file is None and self.validation_file is None:
raise ValueError("Need either a dataset name or a training/validation file.")
elif self.source_lang is None or self.target_lang is None:
raise ValueError("Need to specify the source language and the target language.")
# accepting both json and jsonl file extensions, as
# many jsonlines files actually have a .json extension
valid_extensions = ["json", "jsonl"]
if self.train_file is not None:
extension = self.train_file.split(".")[-1]
assert extension in valid_extensions, "`train_file` should be a jsonlines file."
if self.validation_file is not None:
extension = self.validation_file.split(".")[-1]
assert extension in valid_extensions, "`validation_file` should be a jsonlines file."
if self.val_max_target_length is None:
self.val_max_target_length = self.max_target_length
def main():
# See all possible arguments in src/transformers/training_args.py
# or by passing the --help flag to this script.
# We now keep distinct sets of args, for a cleaner separation of concerns.
parser = HfArgumentParser((ModelArguments, DataTrainingArguments, Seq2SeqTrainingArguments))
if len(sys.argv) == 2 and sys.argv[1].endswith(".json"):
# If we pass only one argument to the script and it's the path to a json file,
# let's parse it to get our arguments.
model_args, data_args, training_args = parser.parse_json_file(json_file=os.path.abspath(sys.argv[1]))
else:
model_args, data_args, training_args = parser.parse_args_into_dataclasses()
# Setup logging
logging.basicConfig(
format="%(asctime)s - %(levelname)s - %(name)s - %(message)s",
datefmt="%m/%d/%Y %H:%M:%S",
handlers=[logging.StreamHandler(sys.stdout)],
)
log_level = training_args.get_process_log_level()
logger.setLevel(log_level)
datasets.utils.logging.set_verbosity(log_level)
transformers.utils.logging.set_verbosity(log_level)
transformers.utils.logging.enable_default_handler()
transformers.utils.logging.enable_explicit_format()
# Log on each process the small summary:
logger.warning(
f"Process rank: {training_args.local_rank}, device: {training_args.device}, n_gpu: {training_args.n_gpu}"
+ f"distributed training: {bool(training_args.local_rank != -1)}, 16-bits training: {training_args.fp16}"
)
logger.info(f"Training/evaluation parameters {training_args}")
if data_args.source_prefix is None and model_args.model_name_or_path in [
"t5-small",
"t5-base",
"t5-large",
"t5-3b",
"t5-11b",
]:
logger.warning(
"You're running a t5 model but didn't provide a source prefix, which is expected, e.g. with "
"`--source_prefix 'translate English to German: ' `"
)
# Detecting last checkpoint.
last_checkpoint = None
if os.path.isdir(training_args.output_dir) and training_args.do_train and not training_args.overwrite_output_dir:
last_checkpoint = get_last_checkpoint(training_args.output_dir)
if last_checkpoint is None and len(os.listdir(training_args.output_dir)) > 0:
raise ValueError(
f"Output directory ({training_args.output_dir}) already exists and is not empty. "
"Use --overwrite_output_dir to overcome."
)
elif last_checkpoint is not None and training_args.resume_from_checkpoint is None:
logger.info(
f"Checkpoint detected, resuming training at {last_checkpoint}. To avoid this behavior, change "
"the `--output_dir` or add `--overwrite_output_dir` to train from scratch."
)
# Set seed before initializing model.
set_seed(training_args.seed)
# Get the datasets: you can either provide your own JSON training and evaluation files (see below)
# or just provide the name of one of the public datasets available on the hub at https://huggingface.co/datasets/
# (the dataset will be downloaded automatically from the datasets Hub).
#
# For translation, only JSON files are supported, with one field named "translation" containing two keys for the
# source and target languages (unless you adapt what follows).
#
# In distributed training, the load_dataset function guarantee that only one local process can concurrently
# download the dataset.
if data_args.dataset_name is not None:
# Downloading and loading a dataset from the hub.
raw_datasets = load_dataset(
data_args.dataset_name, data_args.dataset_config_name, cache_dir=model_args.cache_dir
)
else:
data_files = {}
if data_args.train_file is not None:
data_files["train"] = data_args.train_file
extension = data_args.train_file.split(".")[-1]
if data_args.validation_file is not None:
data_files["validation"] = data_args.validation_file
extension = data_args.validation_file.split(".")[-1]
if data_args.test_file is not None:
data_files["test"] = data_args.test_file
extension = data_args.test_file.split(".")[-1]
raw_datasets = load_dataset(extension, data_files=data_files, cache_dir=model_args.cache_dir)
# See more about loading any type of standard or custom dataset (from files, python dict, pandas DataFrame, etc) at
# https://huggingface.co/docs/datasets/loading_datasets.html.
# Load pretrained model and tokenizer
#
# Distributed training:
# The .from_pretrained methods guarantee that only one local process can concurrently
# download model & vocab.
config = AutoConfig.from_pretrained(
model_args.config_name if model_args.config_name else model_args.model_name_or_path,
cache_dir=model_args.cache_dir,
revision=model_args.model_revision,
use_auth_token=True if model_args.use_auth_token else None,
)
tokenizer = AutoTokenizer.from_pretrained(
model_args.tokenizer_name if model_args.tokenizer_name else model_args.model_name_or_path,
cache_dir=model_args.cache_dir,
use_fast=model_args.use_fast_tokenizer,
revision=model_args.model_revision,
use_auth_token=True if model_args.use_auth_token else None,
)
model = AutoModelForSeq2SeqLM.from_pretrained(
model_args.model_name_or_path,
from_tf=bool(".ckpt" in model_args.model_name_or_path),
config=config,
cache_dir=model_args.cache_dir,
revision=model_args.model_revision,
use_auth_token=True if model_args.use_auth_token else None,
)
model.resize_token_embeddings(len(tokenizer))
# Set decoder_start_token_id
if model.config.decoder_start_token_id is None and isinstance(tokenizer, (MBartTokenizer, MBartTokenizerFast)):
if isinstance(tokenizer, MBartTokenizer):
model.config.decoder_start_token_id = tokenizer.lang_code_to_id[data_args.target_lang]
else:
model.config.decoder_start_token_id = tokenizer.convert_tokens_to_ids(data_args.target_lang)
if model.config.decoder_start_token_id is None:
raise ValueError("Make sure that `config.decoder_start_token_id` is correctly defined")
prefix = data_args.source_prefix if data_args.source_prefix is not None else ""
# Preprocessing the datasets.
# We need to tokenize inputs and targets.
if training_args.do_train:
column_names = raw_datasets["train"].column_names
elif training_args.do_eval:
column_names = raw_datasets["validation"].column_names
elif training_args.do_predict:
column_names = raw_datasets["test"].column_names
else:
logger.info("There is nothing to do. Please pass `do_train`, `do_eval` and/or `do_predict`.")
return
# For translation we set the codes of our source and target languages (only useful for mBART, the others will
# ignore those attributes).
if isinstance(tokenizer, tuple(MULTILINGUAL_TOKENIZERS)):
assert data_args.target_lang is not None and data_args.source_lang is not None, (
f"{tokenizer.__class__.__name__} is a multilingual tokenizer which requires --source_lang and "
"--target_lang arguments."
)
tokenizer.src_lang = data_args.source_lang
tokenizer.tgt_lang = data_args.target_lang
# For multilingual translation models like mBART-50 and M2M100 we need to force the target language token
# as the first generated token. We ask the user to explicitly provide this as --forced_bos_token argument.
forced_bos_token_id = (
tokenizer.lang_code_to_id[data_args.forced_bos_token] if data_args.forced_bos_token is not None else None
)
model.config.forced_bos_token_id = forced_bos_token_id
# Get the language codes for input/target.
source_lang = data_args.source_lang.split("_")[0]
target_lang = data_args.target_lang.split("_")[0]
# Temporarily set max_target_length for training.
max_target_length = data_args.max_target_length
padding = "max_length" if data_args.pad_to_max_length else False
if training_args.label_smoothing_factor > 0 and not hasattr(model, "prepare_decoder_input_ids_from_labels"):
logger.warning(
"label_smoothing is enabled but the `prepare_decoder_input_ids_from_labels` method is not defined for"
f"`{model.__class__.__name__}`. This will lead to loss being calculated twice and will take up more memory"
)
def preprocess_function(examples):
inputs = [ex[source_lang] for ex in examples["translation"]]
targets = [ex[target_lang] for ex in examples["translation"]]
inputs = [prefix + inp for inp in inputs]
model_inputs = tokenizer(inputs, max_length=data_args.max_source_length, padding=padding, truncation=True)
# Setup the tokenizer for targets
with tokenizer.as_target_tokenizer():
labels = tokenizer(targets, max_length=max_target_length, padding=padding, truncation=True)
# If we are padding here, replace all tokenizer.pad_token_id in the labels by -100 when we want to ignore
# padding in the loss.
if padding == "max_length" and data_args.ignore_pad_token_for_loss:
labels["input_ids"] = [
[(l if l != tokenizer.pad_token_id else -100) for l in label] for label in labels["input_ids"]
]
model_inputs["labels"] = labels["input_ids"]
return model_inputs
if training_args.do_train:
if "train" not in raw_datasets:
raise ValueError("--do_train requires a train dataset")
train_dataset = raw_datasets["train"]
if data_args.max_train_samples is not None:
train_dataset = train_dataset.select(range(data_args.max_train_samples))
with training_args.main_process_first(desc="train dataset map pre-processing"):
train_dataset = train_dataset.map(
preprocess_function,
batched=True,
num_proc=data_args.preprocessing_num_workers,
remove_columns=column_names,
load_from_cache_file=not data_args.overwrite_cache,
desc="Running tokenizer on train dataset",
)
if training_args.do_eval:
max_target_length = data_args.val_max_target_length
if "validation" not in raw_datasets:
raise ValueError("--do_eval requires a validation dataset")
eval_dataset = raw_datasets["validation"]
if data_args.max_eval_samples is not None:
eval_dataset = eval_dataset.select(range(data_args.max_eval_samples))
with training_args.main_process_first(desc="validation dataset map pre-processing"):
eval_dataset = eval_dataset.map(
preprocess_function,
batched=True,
num_proc=data_args.preprocessing_num_workers,
remove_columns=column_names,
load_from_cache_file=not data_args.overwrite_cache,
desc="Running tokenizer on validation dataset",
)
if training_args.do_predict:
max_target_length = data_args.val_max_target_length
if "test" not in raw_datasets:
raise ValueError("--do_predict requires a test dataset")
predict_dataset = raw_datasets["test"]
if data_args.max_predict_samples is not None:
predict_dataset = predict_dataset.select(range(data_args.max_predict_samples))
with training_args.main_process_first(desc="prediction dataset map pre-processing"):
predict_dataset = predict_dataset.map(
preprocess_function,
batched=True,
num_proc=data_args.preprocessing_num_workers,
remove_columns=column_names,
load_from_cache_file=not data_args.overwrite_cache,
desc="Running tokenizer on prediction dataset",
)
# Data collator
label_pad_token_id = -100 if data_args.ignore_pad_token_for_loss else tokenizer.pad_token_id
if data_args.pad_to_max_length:
data_collator = default_data_collator
else:
data_collator = DataCollatorForSeq2Seq(
tokenizer,
model=model,
label_pad_token_id=label_pad_token_id,
pad_to_multiple_of=8 if training_args.fp16 else None,
)
# Metric
metric = load_metric("sacrebleu")
def postprocess_text(preds, labels):
preds = [pred.strip() for pred in preds]
labels = [[label.strip()] for label in labels]
return preds, labels
def compute_metrics(eval_preds):
preds, labels = eval_preds
if isinstance(preds, tuple):
preds = preds[0]
decoded_preds = tokenizer.batch_decode(preds, skip_special_tokens=True)
if data_args.ignore_pad_token_for_loss:
# Replace -100 in the labels as we can't decode them.
labels = np.where(labels != -100, labels, tokenizer.pad_token_id)
decoded_labels = tokenizer.batch_decode(labels, skip_special_tokens=True)
# Some simple post-processing
decoded_preds, decoded_labels = postprocess_text(decoded_preds, decoded_labels)
result = metric.compute(predictions=decoded_preds, references=decoded_labels)
result = {"bleu": result["score"]}
prediction_lens = [np.count_nonzero(pred != tokenizer.pad_token_id) for pred in preds]
result["gen_len"] = np.mean(prediction_lens)
result = {k: round(v, 4) for k, v in result.items()}
return result
# Initialize our Trainer
trainer = Seq2SeqTrainer(
model=model,
args=training_args,
train_dataset=train_dataset if training_args.do_train else None,
eval_dataset=eval_dataset if training_args.do_eval else None,
tokenizer=tokenizer,
data_collator=data_collator,
compute_metrics=compute_metrics if training_args.predict_with_generate else None,
)
# Training
if training_args.do_train:
checkpoint = None
if training_args.resume_from_checkpoint is not None:
checkpoint = training_args.resume_from_checkpoint
elif last_checkpoint is not None:
checkpoint = last_checkpoint
train_result = trainer.train(resume_from_checkpoint=checkpoint)
trainer.save_model() # Saves the tokenizer too for easy upload
metrics = train_result.metrics
max_train_samples = (
data_args.max_train_samples if data_args.max_train_samples is not None else len(train_dataset)
)
metrics["train_samples"] = min(max_train_samples, len(train_dataset))
trainer.log_metrics("train", metrics)
trainer.save_metrics("train", metrics)
trainer.save_state()
# Evaluation
results = {}
max_length = (
training_args.generation_max_length
if training_args.generation_max_length is not None
else data_args.val_max_target_length
)
num_beams = data_args.num_beams if data_args.num_beams is not None else training_args.generation_num_beams
if training_args.do_eval:
logger.info("*** Evaluate ***")
metrics = trainer.evaluate(max_length=max_length, num_beams=num_beams, metric_key_prefix="eval")
max_eval_samples = data_args.max_eval_samples if data_args.max_eval_samples is not None else len(eval_dataset)
metrics["eval_samples"] = min(max_eval_samples, len(eval_dataset))
trainer.log_metrics("eval", metrics)
trainer.save_metrics("eval", metrics)
if training_args.do_predict:
logger.info("*** Predict ***")
predict_results = trainer.predict(
predict_dataset, metric_key_prefix="predict", max_length=max_length, num_beams=num_beams
)
metrics = predict_results.metrics
max_predict_samples = (
data_args.max_predict_samples if data_args.max_predict_samples is not None else len(predict_dataset)
)
metrics["predict_samples"] = min(max_predict_samples, len(predict_dataset))
trainer.log_metrics("predict", metrics)
trainer.save_metrics("predict", metrics)
if trainer.is_world_process_zero():
if training_args.predict_with_generate:
predictions = tokenizer.batch_decode(
predict_results.predictions, skip_special_tokens=True, clean_up_tokenization_spaces=True
)
predictions = [pred.strip() for pred in predictions]
output_prediction_file = os.path.join(training_args.output_dir, "generated_predictions.txt")
with open(output_prediction_file, "w", encoding="utf-8") as writer:
writer.write("\n".join(predictions))
kwargs = {"finetuned_from": model_args.model_name_or_path, "tasks": "translation"}
if data_args.dataset_name is not None:
kwargs["dataset_tags"] = data_args.dataset_name
if data_args.dataset_config_name is not None:
kwargs["dataset_args"] = data_args.dataset_config_name
kwargs["dataset"] = f"{data_args.dataset_name} {data_args.dataset_config_name}"
else:
kwargs["dataset"] = data_args.dataset_name
languages = [l for l in [data_args.source_lang, data_args.target_lang] if l is not None]
if len(languages) > 0:
kwargs["language"] = languages
if training_args.push_to_hub:
trainer.push_to_hub(**kwargs)
else:
trainer.create_model_card(**kwargs)
return results
def _mp_fn(index):
# For xla_spawn (TPUs)
main()
if __name__ == "__main__":
main()
| 27,176 | 42.4832 | 120 | py |
robust-transformers | robust-transformers-main/examples/pytorch/language-modeling/run_mlm.py | #!/usr/bin/env python
# coding=utf-8
# Copyright 2020 The HuggingFace Team All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
"""
Fine-tuning the library models for masked language modeling (BERT, ALBERT, RoBERTa...) on a text file or a dataset.
Here is the full list of checkpoints on the hub that can be fine-tuned by this script:
https://huggingface.co/models?filter=fill-mask
"""
# You can also adapt this script on your own masked language modeling task. Pointers for this are left as comments.
import logging
import math
import os
import sys
from dataclasses import dataclass, field
from itertools import chain
from typing import Optional
import datasets
from datasets import load_dataset, load_metric
import transformers
from transformers import (
CONFIG_MAPPING,
MODEL_FOR_MASKED_LM_MAPPING,
AutoConfig,
AutoModelForMaskedLM,
AutoTokenizer,
DataCollatorForLanguageModeling,
HfArgumentParser,
Trainer,
TrainingArguments,
set_seed,
)
from transformers.trainer_utils import get_last_checkpoint
from transformers.utils import check_min_version
from transformers.utils.versions import require_version
# Will error if the minimal version of Transformers is not installed. Remove at your own risks.
check_min_version("4.18.0.dev0")
require_version("datasets>=1.8.0", "To fix: pip install -r examples/pytorch/language-modeling/requirements.txt")
logger = logging.getLogger(__name__)
MODEL_CONFIG_CLASSES = list(MODEL_FOR_MASKED_LM_MAPPING.keys())
MODEL_TYPES = tuple(conf.model_type for conf in MODEL_CONFIG_CLASSES)
@dataclass
class ModelArguments:
"""
Arguments pertaining to which model/config/tokenizer we are going to fine-tune, or train from scratch.
"""
model_name_or_path: Optional[str] = field(
default=None,
metadata={
"help": "The model checkpoint for weights initialization."
"Don't set if you want to train a model from scratch."
},
)
model_type: Optional[str] = field(
default=None,
metadata={"help": "If training from scratch, pass a model type from the list: " + ", ".join(MODEL_TYPES)},
)
config_overrides: Optional[str] = field(
default=None,
metadata={
"help": "Override some existing default config settings when a model is trained from scratch. Example: "
"n_embd=10,resid_pdrop=0.2,scale_attn_weights=false,summary_type=cls_index"
},
)
config_name: Optional[str] = field(
default=None, metadata={"help": "Pretrained config name or path if not the same as model_name"}
)
tokenizer_name: Optional[str] = field(
default=None, metadata={"help": "Pretrained tokenizer name or path if not the same as model_name"}
)
cache_dir: Optional[str] = field(
default=None,
metadata={"help": "Where do you want to store the pretrained models downloaded from huggingface.co"},
)
use_fast_tokenizer: bool = field(
default=True,
metadata={"help": "Whether to use one of the fast tokenizer (backed by the tokenizers library) or not."},
)
model_revision: str = field(
default="main",
metadata={"help": "The specific model version to use (can be a branch name, tag name or commit id)."},
)
use_auth_token: bool = field(
default=False,
metadata={
"help": "Will use the token generated when running `transformers-cli login` (necessary to use this script "
"with private models)."
},
)
def __post_init__(self):
if self.config_overrides is not None and (self.config_name is not None or self.model_name_or_path is not None):
raise ValueError(
"--config_overrides can't be used in combination with --config_name or --model_name_or_path"
)
@dataclass
class DataTrainingArguments:
"""
Arguments pertaining to what data we are going to input our model for training and eval.
"""
dataset_name: Optional[str] = field(
default=None, metadata={"help": "The name of the dataset to use (via the datasets library)."}
)
dataset_config_name: Optional[str] = field(
default=None, metadata={"help": "The configuration name of the dataset to use (via the datasets library)."}
)
train_file: Optional[str] = field(default=None, metadata={"help": "The input training data file (a text file)."})
validation_file: Optional[str] = field(
default=None,
metadata={"help": "An optional input evaluation data file to evaluate the perplexity on (a text file)."},
)
overwrite_cache: bool = field(
default=False, metadata={"help": "Overwrite the cached training and evaluation sets"}
)
validation_split_percentage: Optional[int] = field(
default=5,
metadata={
"help": "The percentage of the train set used as validation set in case there's no validation split"
},
)
max_seq_length: Optional[int] = field(
default=None,
metadata={
"help": "The maximum total input sequence length after tokenization. Sequences longer "
"than this will be truncated."
},
)
preprocessing_num_workers: Optional[int] = field(
default=None,
metadata={"help": "The number of processes to use for the preprocessing."},
)
mlm_probability: float = field(
default=0.15, metadata={"help": "Ratio of tokens to mask for masked language modeling loss"}
)
line_by_line: bool = field(
default=False,
metadata={"help": "Whether distinct lines of text in the dataset are to be handled as distinct sequences."},
)
pad_to_max_length: bool = field(
default=False,
metadata={
"help": "Whether to pad all samples to `max_seq_length`. "
"If False, will pad the samples dynamically when batching to the maximum length in the batch."
},
)
max_train_samples: Optional[int] = field(
default=None,
metadata={
"help": "For debugging purposes or quicker training, truncate the number of training examples to this "
"value if set."
},
)
max_eval_samples: Optional[int] = field(
default=None,
metadata={
"help": "For debugging purposes or quicker training, truncate the number of evaluation examples to this "
"value if set."
},
)
def __post_init__(self):
if self.dataset_name is None and self.train_file is None and self.validation_file is None:
raise ValueError("Need either a dataset name or a training/validation file.")
else:
if self.train_file is not None:
extension = self.train_file.split(".")[-1]
if extension not in ["csv", "json", "txt"]:
raise ValueError("`train_file` should be a csv, a json or a txt file.")
if self.validation_file is not None:
extension = self.validation_file.split(".")[-1]
if extension not in ["csv", "json", "txt"]:
raise ValueError("`validation_file` should be a csv, a json or a txt file.")
def main():
# See all possible arguments in src/transformers/training_args.py
# or by passing the --help flag to this script.
# We now keep distinct sets of args, for a cleaner separation of concerns.
parser = HfArgumentParser((ModelArguments, DataTrainingArguments, TrainingArguments))
if len(sys.argv) == 2 and sys.argv[1].endswith(".json"):
# If we pass only one argument to the script and it's the path to a json file,
# let's parse it to get our arguments.
model_args, data_args, training_args = parser.parse_json_file(json_file=os.path.abspath(sys.argv[1]))
else:
model_args, data_args, training_args = parser.parse_args_into_dataclasses()
# Setup logging
logging.basicConfig(
format="%(asctime)s - %(levelname)s - %(name)s - %(message)s",
datefmt="%m/%d/%Y %H:%M:%S",
handlers=[logging.StreamHandler(sys.stdout)],
)
log_level = training_args.get_process_log_level()
logger.setLevel(log_level)
datasets.utils.logging.set_verbosity(log_level)
transformers.utils.logging.set_verbosity(log_level)
transformers.utils.logging.enable_default_handler()
transformers.utils.logging.enable_explicit_format()
# Log on each process the small summary:
logger.warning(
f"Process rank: {training_args.local_rank}, device: {training_args.device}, n_gpu: {training_args.n_gpu}"
+ f"distributed training: {bool(training_args.local_rank != -1)}, 16-bits training: {training_args.fp16}"
)
# Set the verbosity to info of the Transformers logger (on main process only):
logger.info(f"Training/evaluation parameters {training_args}")
# Detecting last checkpoint.
last_checkpoint = None
if os.path.isdir(training_args.output_dir) and training_args.do_train and not training_args.overwrite_output_dir:
last_checkpoint = get_last_checkpoint(training_args.output_dir)
if last_checkpoint is None and len(os.listdir(training_args.output_dir)) > 0:
raise ValueError(
f"Output directory ({training_args.output_dir}) already exists and is not empty. "
"Use --overwrite_output_dir to overcome."
)
elif last_checkpoint is not None and training_args.resume_from_checkpoint is None:
logger.info(
f"Checkpoint detected, resuming training at {last_checkpoint}. To avoid this behavior, change "
"the `--output_dir` or add `--overwrite_output_dir` to train from scratch."
)
# Set seed before initializing model.
set_seed(training_args.seed)
# Get the datasets: you can either provide your own CSV/JSON/TXT training and evaluation files (see below)
# or just provide the name of one of the public datasets available on the hub at https://huggingface.co/datasets/
# (the dataset will be downloaded automatically from the datasets Hub
#
# For CSV/JSON files, this script will use the column called 'text' or the first column. You can easily tweak this
# behavior (see below)
#
# In distributed training, the load_dataset function guarantee that only one local process can concurrently
# download the dataset.
if data_args.dataset_name is not None:
# Downloading and loading a dataset from the hub.
raw_datasets = load_dataset(
data_args.dataset_name, data_args.dataset_config_name, cache_dir=model_args.cache_dir
)
if "validation" not in raw_datasets.keys():
raw_datasets["validation"] = load_dataset(
data_args.dataset_name,
data_args.dataset_config_name,
split=f"train[:{data_args.validation_split_percentage}%]",
cache_dir=model_args.cache_dir,
)
raw_datasets["train"] = load_dataset(
data_args.dataset_name,
data_args.dataset_config_name,
split=f"train[{data_args.validation_split_percentage}%:]",
cache_dir=model_args.cache_dir,
)
else:
data_files = {}
if data_args.train_file is not None:
data_files["train"] = data_args.train_file
extension = data_args.train_file.split(".")[-1]
if data_args.validation_file is not None:
data_files["validation"] = data_args.validation_file
extension = data_args.validation_file.split(".")[-1]
if extension == "txt":
extension = "text"
raw_datasets = load_dataset(extension, data_files=data_files, cache_dir=model_args.cache_dir)
# If no validation data is there, validation_split_percentage will be used to divide the dataset.
if "validation" not in raw_datasets.keys():
raw_datasets["validation"] = load_dataset(
extension,
data_files=data_files,
split=f"train[:{data_args.validation_split_percentage}%]",
cache_dir=model_args.cache_dir,
)
raw_datasets["train"] = load_dataset(
extension,
data_files=data_files,
split=f"train[{data_args.validation_split_percentage}%:]",
cache_dir=model_args.cache_dir,
)
# See more about loading any type of standard or custom dataset (from files, python dict, pandas DataFrame, etc) at
# https://huggingface.co/docs/datasets/loading_datasets.html.
# Load pretrained model and tokenizer
#
# Distributed training:
# The .from_pretrained methods guarantee that only one local process can concurrently
# download model & vocab.
config_kwargs = {
"cache_dir": model_args.cache_dir,
"revision": model_args.model_revision,
"use_auth_token": True if model_args.use_auth_token else None,
}
if model_args.config_name:
config = AutoConfig.from_pretrained(model_args.config_name, **config_kwargs)
elif model_args.model_name_or_path:
config = AutoConfig.from_pretrained(model_args.model_name_or_path, **config_kwargs)
else:
config = CONFIG_MAPPING[model_args.model_type]()
logger.warning("You are instantiating a new config instance from scratch.")
if model_args.config_overrides is not None:
logger.info(f"Overriding config: {model_args.config_overrides}")
config.update_from_string(model_args.config_overrides)
logger.info(f"New config: {config}")
tokenizer_kwargs = {
"cache_dir": model_args.cache_dir,
"use_fast": model_args.use_fast_tokenizer,
"revision": model_args.model_revision,
"use_auth_token": True if model_args.use_auth_token else None,
}
if model_args.tokenizer_name:
tokenizer = AutoTokenizer.from_pretrained(model_args.tokenizer_name, **tokenizer_kwargs)
elif model_args.model_name_or_path:
tokenizer = AutoTokenizer.from_pretrained(model_args.model_name_or_path, **tokenizer_kwargs)
else:
raise ValueError(
"You are instantiating a new tokenizer from scratch. This is not supported by this script."
"You can do it from another script, save it, and load it from here, using --tokenizer_name."
)
if model_args.model_name_or_path:
model = AutoModelForMaskedLM.from_pretrained(
model_args.model_name_or_path,
from_tf=bool(".ckpt" in model_args.model_name_or_path),
config=config,
cache_dir=model_args.cache_dir,
revision=model_args.model_revision,
use_auth_token=True if model_args.use_auth_token else None,
)
else:
logger.info("Training new model from scratch")
model = AutoModelForMaskedLM.from_config(config)
model.resize_token_embeddings(len(tokenizer))
# Preprocessing the datasets.
# First we tokenize all the texts.
if training_args.do_train:
column_names = raw_datasets["train"].column_names
else:
column_names = raw_datasets["validation"].column_names
text_column_name = "text" if "text" in column_names else column_names[0]
if data_args.max_seq_length is None:
max_seq_length = tokenizer.model_max_length
if max_seq_length > 1024:
logger.warning(
f"The tokenizer picked seems to have a very large `model_max_length` ({tokenizer.model_max_length}). "
"Picking 1024 instead. You can change that default value by passing --max_seq_length xxx."
)
max_seq_length = 1024
else:
if data_args.max_seq_length > tokenizer.model_max_length:
logger.warning(
f"The max_seq_length passed ({data_args.max_seq_length}) is larger than the maximum length for the"
f"model ({tokenizer.model_max_length}). Using max_seq_length={tokenizer.model_max_length}."
)
max_seq_length = min(data_args.max_seq_length, tokenizer.model_max_length)
if data_args.line_by_line:
# When using line_by_line, we just tokenize each nonempty line.
padding = "max_length" if data_args.pad_to_max_length else False
def tokenize_function(examples):
# Remove empty lines
examples[text_column_name] = [
line for line in examples[text_column_name] if len(line) > 0 and not line.isspace()
]
return tokenizer(
examples[text_column_name],
padding=padding,
truncation=True,
max_length=max_seq_length,
# We use this option because DataCollatorForLanguageModeling (see below) is more efficient when it
# receives the `special_tokens_mask`.
return_special_tokens_mask=True,
)
with training_args.main_process_first(desc="dataset map tokenization"):
tokenized_datasets = raw_datasets.map(
tokenize_function,
batched=True,
num_proc=data_args.preprocessing_num_workers,
remove_columns=[text_column_name],
load_from_cache_file=not data_args.overwrite_cache,
desc="Running tokenizer on dataset line_by_line",
)
else:
# Otherwise, we tokenize every text, then concatenate them together before splitting them in smaller parts.
# We use `return_special_tokens_mask=True` because DataCollatorForLanguageModeling (see below) is more
# efficient when it receives the `special_tokens_mask`.
def tokenize_function(examples):
return tokenizer(examples[text_column_name], return_special_tokens_mask=True)
with training_args.main_process_first(desc="dataset map tokenization"):
tokenized_datasets = raw_datasets.map(
tokenize_function,
batched=True,
num_proc=data_args.preprocessing_num_workers,
remove_columns=column_names,
load_from_cache_file=not data_args.overwrite_cache,
desc="Running tokenizer on every text in dataset",
)
# Main data processing function that will concatenate all texts from our dataset and generate chunks of
# max_seq_length.
def group_texts(examples):
# Concatenate all texts.
concatenated_examples = {k: list(chain(*examples[k])) for k in examples.keys()}
total_length = len(concatenated_examples[list(examples.keys())[0]])
# We drop the small remainder, we could add padding if the model supported it instead of this drop, you can
# customize this part to your needs.
if total_length >= max_seq_length:
total_length = (total_length // max_seq_length) * max_seq_length
# Split by chunks of max_len.
result = {
k: [t[i : i + max_seq_length] for i in range(0, total_length, max_seq_length)]
for k, t in concatenated_examples.items()
}
return result
# Note that with `batched=True`, this map processes 1,000 texts together, so group_texts throws away a
# remainder for each of those groups of 1,000 texts. You can adjust that batch_size here but a higher value
# might be slower to preprocess.
#
# To speed up this part, we use multiprocessing. See the documentation of the map method for more information:
# https://huggingface.co/docs/datasets/package_reference/main_classes.html#datasets.Dataset.map
with training_args.main_process_first(desc="grouping texts together"):
tokenized_datasets = tokenized_datasets.map(
group_texts,
batched=True,
num_proc=data_args.preprocessing_num_workers,
load_from_cache_file=not data_args.overwrite_cache,
desc=f"Grouping texts in chunks of {max_seq_length}",
)
if training_args.do_train:
if "train" not in tokenized_datasets:
raise ValueError("--do_train requires a train dataset")
train_dataset = tokenized_datasets["train"]
if data_args.max_train_samples is not None:
train_dataset = train_dataset.select(range(data_args.max_train_samples))
if training_args.do_eval:
if "validation" not in tokenized_datasets:
raise ValueError("--do_eval requires a validation dataset")
eval_dataset = tokenized_datasets["validation"]
if data_args.max_eval_samples is not None:
eval_dataset = eval_dataset.select(range(data_args.max_eval_samples))
def preprocess_logits_for_metrics(logits, labels):
if isinstance(logits, tuple):
# Depending on the model and config, logits may contain extra tensors,
# like past_key_values, but logits always come first
logits = logits[0]
return logits.argmax(dim=-1)
metric = load_metric("accuracy")
def compute_metrics(eval_preds):
preds, labels = eval_preds
# preds have the same shape as the labels, after the argmax(-1) has been calculated
# by preprocess_logits_for_metrics
labels = labels.reshape(-1)
preds = preds.reshape(-1)
mask = labels != -100
labels = labels[mask]
preds = preds[mask]
return metric.compute(predictions=preds, references=labels)
# Data collator
# This one will take care of randomly masking the tokens.
pad_to_multiple_of_8 = data_args.line_by_line and training_args.fp16 and not data_args.pad_to_max_length
data_collator = DataCollatorForLanguageModeling(
tokenizer=tokenizer,
mlm_probability=data_args.mlm_probability,
pad_to_multiple_of=8 if pad_to_multiple_of_8 else None,
)
# Initialize our Trainer
trainer = Trainer(
model=model,
args=training_args,
train_dataset=train_dataset if training_args.do_train else None,
eval_dataset=eval_dataset if training_args.do_eval else None,
tokenizer=tokenizer,
data_collator=data_collator,
compute_metrics=compute_metrics if training_args.do_eval else None,
preprocess_logits_for_metrics=preprocess_logits_for_metrics if training_args.do_eval else None,
)
# Training
if training_args.do_train:
checkpoint = None
if training_args.resume_from_checkpoint is not None:
checkpoint = training_args.resume_from_checkpoint
elif last_checkpoint is not None:
checkpoint = last_checkpoint
train_result = trainer.train(resume_from_checkpoint=checkpoint)
trainer.save_model() # Saves the tokenizer too for easy upload
metrics = train_result.metrics
max_train_samples = (
data_args.max_train_samples if data_args.max_train_samples is not None else len(train_dataset)
)
metrics["train_samples"] = min(max_train_samples, len(train_dataset))
trainer.log_metrics("train", metrics)
trainer.save_metrics("train", metrics)
trainer.save_state()
# Evaluation
if training_args.do_eval:
logger.info("*** Evaluate ***")
metrics = trainer.evaluate()
max_eval_samples = data_args.max_eval_samples if data_args.max_eval_samples is not None else len(eval_dataset)
metrics["eval_samples"] = min(max_eval_samples, len(eval_dataset))
try:
perplexity = math.exp(metrics["eval_loss"])
except OverflowError:
perplexity = float("inf")
metrics["perplexity"] = perplexity
trainer.log_metrics("eval", metrics)
trainer.save_metrics("eval", metrics)
kwargs = {"finetuned_from": model_args.model_name_or_path, "tasks": "fill-mask"}
if data_args.dataset_name is not None:
kwargs["dataset_tags"] = data_args.dataset_name
if data_args.dataset_config_name is not None:
kwargs["dataset_args"] = data_args.dataset_config_name
kwargs["dataset"] = f"{data_args.dataset_name} {data_args.dataset_config_name}"
else:
kwargs["dataset"] = data_args.dataset_name
if training_args.push_to_hub:
trainer.push_to_hub(**kwargs)
else:
trainer.create_model_card(**kwargs)
def _mp_fn(index):
# For xla_spawn (TPUs)
main()
if __name__ == "__main__":
main()
| 25,307 | 42.709845 | 119 | py |
robust-transformers | robust-transformers-main/examples/pytorch/language-modeling/run_clm_no_trainer.py | #!/usr/bin/env python
# coding=utf-8
# Copyright 2021 The HuggingFace Inc. team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
"""
Fine-tuning the library models for causal language modeling (GPT, GPT-2, CTRL, ...)
on a text file or a dataset without using HuggingFace Trainer.
Here is the full list of checkpoints on the hub that can be fine-tuned by this script:
https://huggingface.co/models?filter=text-generation
"""
# You can also adapt this script on your own causal language modeling task. Pointers for this are left as comments.
import argparse
import logging
import math
import os
import random
from itertools import chain
from pathlib import Path
import datasets
import torch
from datasets import load_dataset
from torch.utils.data import DataLoader
from tqdm.auto import tqdm
import transformers
from accelerate import Accelerator, DistributedType
from huggingface_hub import Repository
from transformers import (
CONFIG_MAPPING,
MODEL_MAPPING,
AdamW,
AutoConfig,
AutoModelForCausalLM,
AutoTokenizer,
SchedulerType,
default_data_collator,
get_scheduler,
set_seed,
)
from transformers.file_utils import get_full_repo_name
from transformers.utils.versions import require_version
logger = logging.getLogger(__name__)
require_version("datasets>=1.8.0", "To fix: pip install -r examples/pytorch/language-modeling/requirements.txt")
MODEL_CONFIG_CLASSES = list(MODEL_MAPPING.keys())
MODEL_TYPES = tuple(conf.model_type for conf in MODEL_CONFIG_CLASSES)
def parse_args():
parser = argparse.ArgumentParser(description="Finetune a transformers model on a causal language modeling task")
parser.add_argument(
"--dataset_name",
type=str,
default=None,
help="The name of the dataset to use (via the datasets library).",
)
parser.add_argument(
"--dataset_config_name",
type=str,
default=None,
help="The configuration name of the dataset to use (via the datasets library).",
)
parser.add_argument(
"--train_file", type=str, default=None, help="A csv or a json file containing the training data."
)
parser.add_argument(
"--validation_file", type=str, default=None, help="A csv or a json file containing the validation data."
)
parser.add_argument(
"--validation_split_percentage",
default=5,
help="The percentage of the train set used as validation set in case there's no validation split",
)
parser.add_argument(
"--model_name_or_path",
type=str,
help="Path to pretrained model or model identifier from huggingface.co/models.",
required=True,
)
parser.add_argument(
"--config_name",
type=str,
default=None,
help="Pretrained config name or path if not the same as model_name",
)
parser.add_argument(
"--tokenizer_name",
type=str,
default=None,
help="Pretrained tokenizer name or path if not the same as model_name",
)
parser.add_argument(
"--use_slow_tokenizer",
action="store_true",
help="If passed, will use a slow tokenizer (not backed by the 🤗 Tokenizers library).",
)
parser.add_argument(
"--per_device_train_batch_size",
type=int,
default=8,
help="Batch size (per device) for the training dataloader.",
)
parser.add_argument(
"--per_device_eval_batch_size",
type=int,
default=8,
help="Batch size (per device) for the evaluation dataloader.",
)
parser.add_argument(
"--learning_rate",
type=float,
default=5e-5,
help="Initial learning rate (after the potential warmup period) to use.",
)
parser.add_argument("--weight_decay", type=float, default=0.0, help="Weight decay to use.")
parser.add_argument("--num_train_epochs", type=int, default=3, help="Total number of training epochs to perform.")
parser.add_argument(
"--max_train_steps",
type=int,
default=None,
help="Total number of training steps to perform. If provided, overrides num_train_epochs.",
)
parser.add_argument(
"--gradient_accumulation_steps",
type=int,
default=1,
help="Number of updates steps to accumulate before performing a backward/update pass.",
)
parser.add_argument(
"--lr_scheduler_type",
type=SchedulerType,
default="linear",
help="The scheduler type to use.",
choices=["linear", "cosine", "cosine_with_restarts", "polynomial", "constant", "constant_with_warmup"],
)
parser.add_argument(
"--num_warmup_steps", type=int, default=0, help="Number of steps for the warmup in the lr scheduler."
)
parser.add_argument("--output_dir", type=str, default=None, help="Where to store the final model.")
parser.add_argument("--seed", type=int, default=None, help="A seed for reproducible training.")
parser.add_argument(
"--model_type",
type=str,
default=None,
help="Model type to use if training from scratch.",
choices=MODEL_TYPES,
)
parser.add_argument(
"--block_size",
type=int,
default=None,
help="Optional input sequence length after tokenization. The training dataset will be truncated in block of this size for training. Default to the model max input length for single sentence inputs (take into account special tokens).",
)
parser.add_argument(
"--preprocessing_num_workers",
type=int,
default=None,
help="The number of processes to use for the preprocessing.",
)
parser.add_argument(
"--overwrite_cache", type=bool, default=False, help="Overwrite the cached training and evaluation sets"
)
parser.add_argument(
"--no_keep_linebreaks", action="store_true", help="Do not keep line breaks when using TXT files."
)
parser.add_argument("--push_to_hub", action="store_true", help="Whether or not to push the model to the Hub.")
parser.add_argument(
"--hub_model_id", type=str, help="The name of the repository to keep in sync with the local `output_dir`."
)
parser.add_argument("--hub_token", type=str, help="The token to use to push to the Model Hub.")
args = parser.parse_args()
# Sanity checks
if args.dataset_name is None and args.train_file is None and args.validation_file is None:
raise ValueError("Need either a dataset name or a training/validation file.")
else:
if args.train_file is not None:
extension = args.train_file.split(".")[-1]
assert extension in ["csv", "json", "txt"], "`train_file` should be a csv, json or txt file."
if args.validation_file is not None:
extension = args.validation_file.split(".")[-1]
assert extension in ["csv", "json", "txt"], "`validation_file` should be a csv, json or txt file."
if args.push_to_hub:
assert args.output_dir is not None, "Need an `output_dir` to create a repo when `--push_to_hub` is passed."
return args
def main():
args = parse_args()
# Initialize the accelerator. We will let the accelerator handle device placement for us in this example.
accelerator = Accelerator()
# Make one log on every process with the configuration for debugging.
logging.basicConfig(
format="%(asctime)s - %(levelname)s - %(name)s - %(message)s",
datefmt="%m/%d/%Y %H:%M:%S",
level=logging.INFO,
)
logger.info(accelerator.state)
# Setup logging, we only want one process per machine to log things on the screen.
# accelerator.is_local_main_process is only True for one process per machine.
logger.setLevel(logging.INFO if accelerator.is_local_main_process else logging.ERROR)
if accelerator.is_local_main_process:
datasets.utils.logging.set_verbosity_warning()
transformers.utils.logging.set_verbosity_info()
else:
datasets.utils.logging.set_verbosity_error()
transformers.utils.logging.set_verbosity_error()
# If passed along, set the training seed now.
if args.seed is not None:
set_seed(args.seed)
# Handle the repository creation
if accelerator.is_main_process:
if args.push_to_hub:
if args.hub_model_id is None:
repo_name = get_full_repo_name(Path(args.output_dir).name, token=args.hub_token)
else:
repo_name = args.hub_model_id
repo = Repository(args.output_dir, clone_from=repo_name)
elif args.output_dir is not None:
os.makedirs(args.output_dir, exist_ok=True)
accelerator.wait_for_everyone()
# Get the datasets: you can either provide your own CSV/JSON/TXT training and evaluation files (see below)
# or just provide the name of one of the public datasets available on the hub at https://huggingface.co/datasets/
# (the dataset will be downloaded automatically from the datasets Hub).
#
# For CSV/JSON files, this script will use the column called 'text' or the first column if no column called
# 'text' is found. You can easily tweak this behavior (see below).
#
# In distributed training, the load_dataset function guarantee that only one local process can concurrently
# download the dataset.
if args.dataset_name is not None:
# Downloading and loading a dataset from the hub.
raw_datasets = load_dataset(args.dataset_name, args.dataset_config_name)
if "validation" not in raw_datasets.keys():
raw_datasets["validation"] = load_dataset(
args.dataset_name,
args.dataset_config_name,
split=f"train[:{args.validation_split_percentage}%]",
)
raw_datasets["train"] = load_dataset(
args.dataset_name,
args.dataset_config_name,
split=f"train[{args.validation_split_percentage}%:]",
)
else:
data_files = {}
dataset_args = {}
if args.train_file is not None:
data_files["train"] = args.train_file
if args.validation_file is not None:
data_files["validation"] = args.validation_file
extension = args.train_file.split(".")[-1]
if extension == "txt":
extension = "text"
dataset_args["keep_linebreaks"] = not args.no_keep_linebreaks
raw_datasets = load_dataset(extension, data_files=data_files, **dataset_args)
# If no validation data is there, validation_split_percentage will be used to divide the dataset.
if "validation" not in raw_datasets.keys():
raw_datasets["validation"] = load_dataset(
extension,
data_files=data_files,
split=f"train[:{args.validation_split_percentage}%]",
**dataset_args,
)
raw_datasets["train"] = load_dataset(
extension,
data_files=data_files,
split=f"train[{args.validation_split_percentage}%:]",
**dataset_args,
)
# See more about loading any type of standard or custom dataset (from files, python dict, pandas DataFrame, etc) at
# https://huggingface.co/docs/datasets/loading_datasets.html.
# Load pretrained model and tokenizer
#
# In distributed training, the .from_pretrained methods guarantee that only one local process can concurrently
# download model & vocab.
if args.config_name:
config = AutoConfig.from_pretrained(args.config_name)
elif args.model_name_or_path:
config = AutoConfig.from_pretrained(args.model_name_or_path)
else:
config = CONFIG_MAPPING[args.model_type]()
logger.warning("You are instantiating a new config instance from scratch.")
if args.tokenizer_name:
tokenizer = AutoTokenizer.from_pretrained(args.tokenizer_name, use_fast=not args.use_slow_tokenizer)
elif args.model_name_or_path:
tokenizer = AutoTokenizer.from_pretrained(args.model_name_or_path, use_fast=not args.use_slow_tokenizer)
else:
raise ValueError(
"You are instantiating a new tokenizer from scratch. This is not supported by this script."
"You can do it from another script, save it, and load it from here, using --tokenizer_name."
)
if args.model_name_or_path:
model = AutoModelForCausalLM.from_pretrained(
args.model_name_or_path,
from_tf=bool(".ckpt" in args.model_name_or_path),
config=config,
)
else:
logger.info("Training new model from scratch")
model = AutoModelForCausalLM.from_config(config)
model.resize_token_embeddings(len(tokenizer))
# Preprocessing the datasets.
# First we tokenize all the texts.
column_names = raw_datasets["train"].column_names
text_column_name = "text" if "text" in column_names else column_names[0]
def tokenize_function(examples):
return tokenizer(examples[text_column_name])
with accelerator.main_process_first():
tokenized_datasets = raw_datasets.map(
tokenize_function,
batched=True,
num_proc=args.preprocessing_num_workers,
remove_columns=column_names,
load_from_cache_file=not args.overwrite_cache,
desc="Running tokenizer on dataset",
)
if args.block_size is None:
block_size = tokenizer.model_max_length
if block_size > 1024:
logger.warning(
f"The tokenizer picked seems to have a very large `model_max_length` ({tokenizer.model_max_length}). "
"Picking 1024 instead. You can change that default value by passing --block_size xxx."
)
block_size = 1024
else:
if args.block_size > tokenizer.model_max_length:
logger.warning(
f"The block_size passed ({args.block_size}) is larger than the maximum length for the model"
f"({tokenizer.model_max_length}). Using block_size={tokenizer.model_max_length}."
)
block_size = min(args.block_size, tokenizer.model_max_length)
# Main data processing function that will concatenate all texts from our dataset and generate chunks of block_size.
def group_texts(examples):
# Concatenate all texts.
concatenated_examples = {k: list(chain(*examples[k])) for k in examples.keys()}
total_length = len(concatenated_examples[list(examples.keys())[0]])
# We drop the small remainder, we could add padding if the model supported it instead of this drop, you can
# customize this part to your needs.
if total_length >= block_size:
total_length = (total_length // block_size) * block_size
# Split by chunks of max_len.
result = {
k: [t[i : i + block_size] for i in range(0, total_length, block_size)]
for k, t in concatenated_examples.items()
}
result["labels"] = result["input_ids"].copy()
return result
# Note that with `batched=True`, this map processes 1,000 texts together, so group_texts throws away a remainder
# for each of those groups of 1,000 texts. You can adjust that batch_size here but a higher value might be slower
# to preprocess.
#
# To speed up this part, we use multiprocessing. See the documentation of the map method for more information:
# https://huggingface.co/docs/datasets/package_reference/main_classes.html#datasets.Dataset.map
with accelerator.main_process_first():
lm_datasets = tokenized_datasets.map(
group_texts,
batched=True,
num_proc=args.preprocessing_num_workers,
load_from_cache_file=not args.overwrite_cache,
desc=f"Grouping texts in chunks of {block_size}",
)
train_dataset = lm_datasets["train"]
eval_dataset = lm_datasets["validation"]
# Log a few random samples from the training set:
for index in random.sample(range(len(train_dataset)), 3):
logger.info(f"Sample {index} of the training set: {train_dataset[index]}.")
# DataLoaders creation:
train_dataloader = DataLoader(
train_dataset, shuffle=True, collate_fn=default_data_collator, batch_size=args.per_device_train_batch_size
)
eval_dataloader = DataLoader(
eval_dataset, collate_fn=default_data_collator, batch_size=args.per_device_eval_batch_size
)
# Optimizer
# Split weights in two groups, one with weight decay and the other not.
no_decay = ["bias", "LayerNorm.weight"]
optimizer_grouped_parameters = [
{
"params": [p for n, p in model.named_parameters() if not any(nd in n for nd in no_decay)],
"weight_decay": args.weight_decay,
},
{
"params": [p for n, p in model.named_parameters() if any(nd in n for nd in no_decay)],
"weight_decay": 0.0,
},
]
optimizer = AdamW(optimizer_grouped_parameters, lr=args.learning_rate)
# Prepare everything with our `accelerator`.
model, optimizer, train_dataloader, eval_dataloader = accelerator.prepare(
model, optimizer, train_dataloader, eval_dataloader
)
# On TPU, the tie weights in our model have been disconnected, so we need to restore the ties.
if accelerator.distributed_type == DistributedType.TPU:
model.tie_weights()
# Note -> the training dataloader needs to be prepared before we grab his length below (cause its length will be
# shorter in multiprocess)
# Scheduler and math around the number of training steps.
num_update_steps_per_epoch = math.ceil(len(train_dataloader) / args.gradient_accumulation_steps)
if args.max_train_steps is None:
args.max_train_steps = args.num_train_epochs * num_update_steps_per_epoch
else:
args.num_train_epochs = math.ceil(args.max_train_steps / num_update_steps_per_epoch)
lr_scheduler = get_scheduler(
name=args.lr_scheduler_type,
optimizer=optimizer,
num_warmup_steps=args.num_warmup_steps,
num_training_steps=args.max_train_steps,
)
# Train!
total_batch_size = args.per_device_train_batch_size * accelerator.num_processes * args.gradient_accumulation_steps
logger.info("***** Running training *****")
logger.info(f" Num examples = {len(train_dataset)}")
logger.info(f" Num Epochs = {args.num_train_epochs}")
logger.info(f" Instantaneous batch size per device = {args.per_device_train_batch_size}")
logger.info(f" Total train batch size (w. parallel, distributed & accumulation) = {total_batch_size}")
logger.info(f" Gradient Accumulation steps = {args.gradient_accumulation_steps}")
logger.info(f" Total optimization steps = {args.max_train_steps}")
# Only show the progress bar once on each machine.
progress_bar = tqdm(range(args.max_train_steps), disable=not accelerator.is_local_main_process)
completed_steps = 0
for epoch in range(args.num_train_epochs):
model.train()
for step, batch in enumerate(train_dataloader):
outputs = model(**batch)
loss = outputs.loss
loss = loss / args.gradient_accumulation_steps
accelerator.backward(loss)
if step % args.gradient_accumulation_steps == 0 or step == len(train_dataloader) - 1:
optimizer.step()
lr_scheduler.step()
optimizer.zero_grad()
progress_bar.update(1)
completed_steps += 1
if completed_steps >= args.max_train_steps:
break
model.eval()
losses = []
for step, batch in enumerate(eval_dataloader):
with torch.no_grad():
outputs = model(**batch)
loss = outputs.loss
losses.append(accelerator.gather(loss.repeat(args.per_device_eval_batch_size)))
losses = torch.cat(losses)
losses = losses[: len(eval_dataset)]
try:
perplexity = math.exp(torch.mean(losses))
except OverflowError:
perplexity = float("inf")
logger.info(f"epoch {epoch}: perplexity: {perplexity}")
if args.push_to_hub and epoch < args.num_train_epochs - 1:
accelerator.wait_for_everyone()
unwrapped_model = accelerator.unwrap_model(model)
unwrapped_model.save_pretrained(args.output_dir, save_function=accelerator.save)
if accelerator.is_main_process:
tokenizer.save_pretrained(args.output_dir)
repo.push_to_hub(
commit_message=f"Training in progress epoch {epoch}", blocking=False, auto_lfs_prune=True
)
if args.output_dir is not None:
accelerator.wait_for_everyone()
unwrapped_model = accelerator.unwrap_model(model)
unwrapped_model.save_pretrained(args.output_dir, save_function=accelerator.save)
if accelerator.is_main_process:
tokenizer.save_pretrained(args.output_dir)
if args.push_to_hub:
repo.push_to_hub(commit_message="End of training", auto_lfs_prune=True)
if __name__ == "__main__":
main()
| 21,930 | 40.614801 | 242 | py |
robust-transformers | robust-transformers-main/examples/pytorch/language-modeling/run_plm.py | #!/usr/bin/env python
# coding=utf-8
# Copyright 2020 The HuggingFace Team All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
"""
Fine-tuning the library models for permutation language modeling.
"""
# You can also adapt this script on your own permutation language modeling task. Pointers for this are left as comments.
import logging
import math
import os
import sys
from dataclasses import dataclass, field
from itertools import chain
from typing import Optional
import datasets
from datasets import load_dataset
import transformers
from transformers import (
AutoConfig,
AutoTokenizer,
DataCollatorForPermutationLanguageModeling,
HfArgumentParser,
Trainer,
TrainingArguments,
XLNetConfig,
XLNetLMHeadModel,
set_seed,
)
from transformers.trainer_utils import get_last_checkpoint
from transformers.utils import check_min_version
from transformers.utils.versions import require_version
# Will error if the minimal version of Transformers is not installed. Remove at your own risks.
check_min_version("4.18.0.dev0")
require_version("datasets>=1.8.0", "To fix: pip install -r examples/pytorch/language-modeling/requirements.txt")
logger = logging.getLogger(__name__)
@dataclass
class ModelArguments:
"""
Arguments pertaining to which model/config/tokenizer we are going to fine-tune, or train from scratch.
"""
model_name_or_path: Optional[str] = field(
default=None,
metadata={
"help": "The model checkpoint for weights initialization."
"Don't set if you want to train a model from scratch."
},
)
config_name: Optional[str] = field(
default=None, metadata={"help": "Pretrained config name or path if not the same as model_name"}
)
config_overrides: Optional[str] = field(
default=None,
metadata={
"help": "Override some existing default config settings when a model is trained from scratch. Example: "
"n_embd=10,resid_pdrop=0.2,scale_attn_weights=false,summary_type=cls_index"
},
)
tokenizer_name: Optional[str] = field(
default=None, metadata={"help": "Pretrained tokenizer name or path if not the same as model_name"}
)
cache_dir: Optional[str] = field(
default=None,
metadata={"help": "Where do you want to store the pretrained models downloaded from huggingface.co"},
)
use_fast_tokenizer: bool = field(
default=True,
metadata={"help": "Whether to use one of the fast tokenizer (backed by the tokenizers library) or not."},
)
model_revision: str = field(
default="main",
metadata={"help": "The specific model version to use (can be a branch name, tag name or commit id)."},
)
use_auth_token: bool = field(
default=False,
metadata={
"help": "Will use the token generated when running `transformers-cli login` (necessary to use this script "
"with private models)."
},
)
def __post_init__(self):
if self.config_overrides is not None and (self.config_name is not None or self.model_name_or_path is not None):
raise ValueError(
"--config_overrides can't be used in combination with --config_name or --model_name_or_path"
)
@dataclass
class DataTrainingArguments:
"""
Arguments pertaining to what data we are going to input our model for training and eval.
"""
dataset_name: Optional[str] = field(
default=None, metadata={"help": "The name of the dataset to use (via the datasets library)."}
)
dataset_config_name: Optional[str] = field(
default=None, metadata={"help": "The configuration name of the dataset to use (via the datasets library)."}
)
train_file: Optional[str] = field(default=None, metadata={"help": "The input training data file (a text file)."})
validation_file: Optional[str] = field(
default=None,
metadata={"help": "An optional input evaluation data file to evaluate the perplexity on (a text file)."},
)
overwrite_cache: bool = field(
default=False, metadata={"help": "Overwrite the cached training and evaluation sets"}
)
validation_split_percentage: Optional[int] = field(
default=5,
metadata={
"help": "The percentage of the train set used as validation set in case there's no validation split"
},
)
max_seq_length: int = field(
default=512,
metadata={
"help": "The maximum total input sequence length after tokenization. Sequences longer "
"than this will be truncated."
},
)
preprocessing_num_workers: Optional[int] = field(
default=None,
metadata={"help": "The number of processes to use for the preprocessing."},
)
plm_probability: float = field(
default=1 / 6,
metadata={
"help": "Ratio of length of a span of masked tokens to surrounding context length for "
"permutation language modeling."
},
)
max_span_length: int = field(
default=5, metadata={"help": "Maximum length of a span of masked tokens for permutation language modeling."}
)
line_by_line: bool = field(
default=False,
metadata={"help": "Whether distinct lines of text in the dataset are to be handled as distinct sequences."},
)
pad_to_max_length: bool = field(
default=False,
metadata={
"help": "Whether to pad all samples to `max_seq_length`. "
"If False, will pad the samples dynamically when batching to the maximum length in the batch."
},
)
max_train_samples: Optional[int] = field(
default=None,
metadata={
"help": "For debugging purposes or quicker training, truncate the number of training examples to this "
"value if set."
},
)
max_eval_samples: Optional[int] = field(
default=None,
metadata={
"help": "For debugging purposes or quicker training, truncate the number of evaluation examples to this "
"value if set."
},
)
def __post_init__(self):
if self.dataset_name is None and self.train_file is None and self.validation_file is None:
raise ValueError("Need either a dataset name or a training/validation file.")
else:
if self.train_file is not None:
extension = self.train_file.split(".")[-1]
assert extension in ["csv", "json", "txt"], "`train_file` should be a csv, a json or a txt file."
if self.validation_file is not None:
extension = self.validation_file.split(".")[-1]
assert extension in ["csv", "json", "txt"], "`validation_file` should be a csv, a json or a txt file."
def main():
# See all possible arguments in src/transformers/training_args.py
# or by passing the --help flag to this script.
# We now keep distinct sets of args, for a cleaner separation of concerns.
parser = HfArgumentParser((ModelArguments, DataTrainingArguments, TrainingArguments))
if len(sys.argv) == 2 and sys.argv[1].endswith(".json"):
# If we pass only one argument to the script and it's the path to a json file,
# let's parse it to get our arguments.
model_args, data_args, training_args = parser.parse_json_file(json_file=os.path.abspath(sys.argv[1]))
else:
model_args, data_args, training_args = parser.parse_args_into_dataclasses()
# Setup logging
logging.basicConfig(
format="%(asctime)s - %(levelname)s - %(name)s - %(message)s",
datefmt="%m/%d/%Y %H:%M:%S",
handlers=[logging.StreamHandler(sys.stdout)],
)
log_level = training_args.get_process_log_level()
logger.setLevel(log_level)
datasets.utils.logging.set_verbosity(log_level)
transformers.utils.logging.set_verbosity(log_level)
transformers.utils.logging.enable_default_handler()
transformers.utils.logging.enable_explicit_format()
# Log on each process the small summary:
logger.warning(
f"Process rank: {training_args.local_rank}, device: {training_args.device}, n_gpu: {training_args.n_gpu}"
+ f"distributed training: {bool(training_args.local_rank != -1)}, 16-bits training: {training_args.fp16}"
)
logger.info(f"Training/evaluation parameters {training_args}")
# Detecting last checkpoint.
last_checkpoint = None
if os.path.isdir(training_args.output_dir) and training_args.do_train and not training_args.overwrite_output_dir:
last_checkpoint = get_last_checkpoint(training_args.output_dir)
if last_checkpoint is None and len(os.listdir(training_args.output_dir)) > 0:
raise ValueError(
f"Output directory ({training_args.output_dir}) already exists and is not empty. "
"Use --overwrite_output_dir to overcome."
)
elif last_checkpoint is not None and training_args.resume_from_checkpoint is None:
logger.info(
f"Checkpoint detected, resuming training at {last_checkpoint}. To avoid this behavior, change "
"the `--output_dir` or add `--overwrite_output_dir` to train from scratch."
)
# Set seed before initializing model.
set_seed(training_args.seed)
# Get the datasets: you can either provide your own CSV/JSON/TXT training and evaluation files (see below)
# or just provide the name of one of the public datasets available on the hub at https://huggingface.co/datasets/
# (the dataset will be downloaded automatically from the datasets Hub).
#
# For CSV/JSON files, this script will use the column called 'text' or the first column if no column called
# 'text' is found. You can easily tweak this behavior (see below).
#
# In distributed training, the load_dataset function guarantee that only one local process can concurrently
# download the dataset.
if data_args.dataset_name is not None:
# Downloading and loading a dataset from the hub.
raw_datasets = load_dataset(
data_args.dataset_name, data_args.dataset_config_name, cache_dir=model_args.cache_dir
)
if "validation" not in raw_datasets.keys():
raw_datasets["validation"] = load_dataset(
data_args.dataset_name,
data_args.dataset_config_name,
split=f"train[:{data_args.validation_split_percentage}%]",
cache_dir=model_args.cache_dir,
)
raw_datasets["train"] = load_dataset(
data_args.dataset_name,
data_args.dataset_config_name,
split=f"train[{data_args.validation_split_percentage}%:]",
cache_dir=model_args.cache_dir,
)
else:
data_files = {}
if data_args.train_file is not None:
data_files["train"] = data_args.train_file
if data_args.validation_file is not None:
data_files["validation"] = data_args.validation_file
extension = data_args.train_file.split(".")[-1]
if extension == "txt":
extension = "text"
raw_datasets = load_dataset(extension, data_files=data_files, cache_dir=model_args.cache_dir)
# If no validation data is there, validation_split_percentage will be used to divide the dataset.
if "validation" not in raw_datasets.keys():
raw_datasets["validation"] = load_dataset(
extension,
data_files=data_files,
split=f"train[:{data_args.validation_split_percentage}%]",
cache_dir=model_args.cache_dir,
)
raw_datasets["train"] = load_dataset(
extension,
data_files=data_files,
split=f"train[{data_args.validation_split_percentage}%:]",
cache_dir=model_args.cache_dir,
)
# See more about loading any type of standard or custom dataset (from files, python dict, pandas DataFrame, etc) at
# https://huggingface.co/docs/datasets/loading_datasets.html.
# Load pretrained model and tokenizer
#
# Distributed training:
# The .from_pretrained methods guarantee that only one local process can concurrently
# download model & vocab.
config_kwargs = {
"cache_dir": model_args.cache_dir,
"revision": model_args.model_revision,
"use_auth_token": True if model_args.use_auth_token else None,
}
if model_args.config_name:
config = AutoConfig.from_pretrained(model_args.config_name, **config_kwargs)
elif model_args.model_name_or_path:
config = AutoConfig.from_pretrained(model_args.model_name_or_path, **config_kwargs)
else:
config = XLNetConfig()
logger.warning("You are instantiating a new config instance from scratch.")
if model_args.config_overrides is not None:
logger.info(f"Overriding config: {model_args.config_overrides}")
config.update_from_string(model_args.config_overrides)
logger.info(f"New config: {config}")
tokenizer_kwargs = {
"cache_dir": model_args.cache_dir,
"use_fast": model_args.use_fast_tokenizer,
"revision": model_args.model_revision,
"use_auth_token": True if model_args.use_auth_token else None,
}
if model_args.tokenizer_name:
tokenizer = AutoTokenizer.from_pretrained(model_args.tokenizer_name, **tokenizer_kwargs)
elif model_args.model_name_or_path:
tokenizer = AutoTokenizer.from_pretrained(model_args.model_name_or_path, **tokenizer_kwargs)
else:
raise ValueError(
"You are instantiating a new tokenizer from scratch. This is not supported by this script."
"You can do it from another script, save it, and load it from here, using --tokenizer_name."
)
if model_args.model_name_or_path:
model = XLNetLMHeadModel.from_pretrained(
model_args.model_name_or_path,
from_tf=bool(".ckpt" in model_args.model_name_or_path),
config=config,
cache_dir=model_args.cache_dir,
revision=model_args.model_revision,
use_auth_token=True if model_args.use_auth_token else None,
)
else:
logger.info("Training new model from scratch")
model = XLNetLMHeadModel(config)
model.resize_token_embeddings(len(tokenizer))
# Preprocessing the datasets.
# First we tokenize all the texts.
if training_args.do_train:
column_names = raw_datasets["train"].column_names
else:
column_names = raw_datasets["validation"].column_names
text_column_name = "text" if "text" in column_names else column_names[0]
if data_args.max_seq_length > tokenizer.model_max_length:
logger.warning(
f"The max_seq_length passed ({data_args.max_seq_length}) is larger than the maximum length for the"
f"model ({tokenizer.model_max_length}). Using max_seq_length={tokenizer.model_max_length}."
)
max_seq_length = min(data_args.max_seq_length, tokenizer.model_max_length)
if data_args.line_by_line:
# When using line_by_line, we just tokenize each nonempty line.
padding = "max_length" if data_args.pad_to_max_length else False
def tokenize_function(examples):
# Remove empty lines
examples["text"] = [line for line in examples["text"] if len(line) > 0 and not line.isspace()]
return tokenizer(examples["text"], padding=padding, truncation=True, max_length=max_seq_length)
with training_args.main_process_first(desc="dataset map tokenization"):
tokenized_datasets = raw_datasets.map(
tokenize_function,
batched=True,
num_proc=data_args.preprocessing_num_workers,
remove_columns=[text_column_name],
load_from_cache_file=not data_args.overwrite_cache,
desc="Running tokenizer on dataset line_by_line",
)
else:
# Otherwise, we tokenize every text, then concatenate them together before splitting them in smaller parts.
def tokenize_function(examples):
return tokenizer(examples[text_column_name])
with training_args.main_process_first(desc="dataset map tokenization"):
tokenized_datasets = raw_datasets.map(
tokenize_function,
batched=True,
num_proc=data_args.preprocessing_num_workers,
remove_columns=column_names,
load_from_cache_file=not data_args.overwrite_cache,
desc="Running tokenizer on every text in dataset",
)
# Main data processing function that will concatenate all texts from our dataset and generate chunks of
# max_seq_length.
def group_texts(examples):
# Concatenate all texts.
concatenated_examples = {k: list(chain(*examples[k])) for k in examples.keys()}
total_length = len(concatenated_examples[list(examples.keys())[0]])
# We drop the small remainder, we could add padding if the model supported it instead of this drop, you can
# customize this part to your needs.
if total_length >= max_seq_length:
total_length = (total_length // max_seq_length) * max_seq_length
# Split by chunks of max_len.
result = {
k: [t[i : i + max_seq_length] for i in range(0, total_length, max_seq_length)]
for k, t in concatenated_examples.items()
}
return result
# Note that with `batched=True`, this map processes 1,000 texts together, so group_texts throws away a
# remainder for each of those groups of 1,000 texts. You can adjust that batch_size here but a higher value
# might be slower to preprocess.
#
# To speed up this part, we use multiprocessing. See the documentation of the map method for more information:
# https://huggingface.co/docs/datasets/package_reference/main_classes.html#datasets.Dataset.map
with training_args.main_process_first(desc="grouping texts together"):
tokenized_datasets = tokenized_datasets.map(
group_texts,
batched=True,
num_proc=data_args.preprocessing_num_workers,
load_from_cache_file=not data_args.overwrite_cache,
desc=f"Grouping texts in chunks of {max_seq_length}",
)
if training_args.do_train:
if "train" not in tokenized_datasets:
raise ValueError("--do_train requires a train dataset")
train_dataset = tokenized_datasets["train"]
if data_args.max_train_samples is not None:
train_dataset = train_dataset.select(range(data_args.max_train_samples))
if training_args.do_eval:
if "validation" not in tokenized_datasets:
raise ValueError("--do_eval requires a validation dataset")
eval_dataset = tokenized_datasets["validation"]
if data_args.max_eval_samples is not None:
eval_dataset = eval_dataset.select(range(data_args.max_eval_samples))
# Data collator
data_collator = DataCollatorForPermutationLanguageModeling(
tokenizer=tokenizer,
plm_probability=data_args.plm_probability,
max_span_length=data_args.max_span_length,
)
# Initialize our Trainer
trainer = Trainer(
model=model,
args=training_args,
train_dataset=train_dataset if training_args.do_train else None,
eval_dataset=eval_dataset if training_args.do_eval else None,
tokenizer=tokenizer,
data_collator=data_collator,
)
# Training
if training_args.do_train:
checkpoint = None
if training_args.resume_from_checkpoint is not None:
checkpoint = training_args.resume_from_checkpoint
elif last_checkpoint is not None:
checkpoint = last_checkpoint
train_result = trainer.train(resume_from_checkpoint=checkpoint)
trainer.save_model() # Saves the tokenizer too for easy upload
metrics = train_result.metrics
max_train_samples = (
data_args.max_train_samples if data_args.max_train_samples is not None else len(train_dataset)
)
metrics["train_samples"] = min(max_train_samples, len(train_dataset))
trainer.log_metrics("train", metrics)
trainer.save_metrics("train", metrics)
trainer.save_state()
# Evaluation
if training_args.do_eval:
logger.info("*** Evaluate ***")
metrics = trainer.evaluate()
max_eval_samples = data_args.max_eval_samples if data_args.max_eval_samples is not None else len(eval_dataset)
metrics["eval_samples"] = min(max_eval_samples, len(eval_dataset))
try:
perplexity = math.exp(metrics["eval_loss"])
except OverflowError:
perplexity = float("inf")
metrics["perplexity"] = perplexity
trainer.log_metrics("eval", metrics)
trainer.save_metrics("eval", metrics)
kwargs = {"finetuned_from": model_args.model_name_or_path, "tasks": "language-modeling"}
if data_args.dataset_name is not None:
kwargs["dataset_tags"] = data_args.dataset_name
if data_args.dataset_config_name is not None:
kwargs["dataset_args"] = data_args.dataset_config_name
kwargs["dataset"] = f"{data_args.dataset_name} {data_args.dataset_config_name}"
else:
kwargs["dataset"] = data_args.dataset_name
if training_args.push_to_hub:
trainer.push_to_hub(**kwargs)
else:
trainer.create_model_card(**kwargs)
def _mp_fn(index):
# For xla_spawn (TPUs)
main()
if __name__ == "__main__":
main()
| 22,553 | 41.878327 | 120 | py |
robust-transformers | robust-transformers-main/examples/pytorch/language-modeling/run_mlm_no_trainer.py | #!/usr/bin/env python
# coding=utf-8
# Copyright 2021 The HuggingFace Inc. team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
"""
Fine-tuning the library models for masked language modeling (BERT, ALBERT, RoBERTa...)
on a text file or a dataset without using HuggingFace Trainer.
Here is the full list of checkpoints on the hub that can be fine-tuned by this script:
https://huggingface.co/models?filter=fill-mask
"""
# You can also adapt this script on your own mlm task. Pointers for this are left as comments.
import argparse
import logging
import math
import os
import random
from itertools import chain
from pathlib import Path
import datasets
import torch
from datasets import load_dataset
from torch.utils.data import DataLoader
from tqdm.auto import tqdm
import transformers
from accelerate import Accelerator, DistributedType
from huggingface_hub import Repository
from transformers import (
CONFIG_MAPPING,
MODEL_MAPPING,
AdamW,
AutoConfig,
AutoModelForMaskedLM,
AutoTokenizer,
DataCollatorForLanguageModeling,
SchedulerType,
get_scheduler,
set_seed,
)
from transformers.file_utils import get_full_repo_name
from transformers.utils.versions import require_version
logger = logging.getLogger(__name__)
require_version("datasets>=1.8.0", "To fix: pip install -r examples/pytorch/language-modeling/requirements.txt")
MODEL_CONFIG_CLASSES = list(MODEL_MAPPING.keys())
MODEL_TYPES = tuple(conf.model_type for conf in MODEL_CONFIG_CLASSES)
def parse_args():
parser = argparse.ArgumentParser(description="Finetune a transformers model on a Masked Language Modeling task")
parser.add_argument(
"--dataset_name",
type=str,
default=None,
help="The name of the dataset to use (via the datasets library).",
)
parser.add_argument(
"--dataset_config_name",
type=str,
default=None,
help="The configuration name of the dataset to use (via the datasets library).",
)
parser.add_argument(
"--train_file", type=str, default=None, help="A csv or a json file containing the training data."
)
parser.add_argument(
"--validation_file", type=str, default=None, help="A csv or a json file containing the validation data."
)
parser.add_argument(
"--validation_split_percentage",
default=5,
help="The percentage of the train set used as validation set in case there's no validation split",
)
parser.add_argument(
"--pad_to_max_length",
action="store_true",
help="If passed, pad all samples to `max_length`. Otherwise, dynamic padding is used.",
)
parser.add_argument(
"--model_name_or_path",
type=str,
help="Path to pretrained model or model identifier from huggingface.co/models.",
required=True,
)
parser.add_argument(
"--config_name",
type=str,
default=None,
help="Pretrained config name or path if not the same as model_name",
)
parser.add_argument(
"--tokenizer_name",
type=str,
default=None,
help="Pretrained tokenizer name or path if not the same as model_name",
)
parser.add_argument(
"--use_slow_tokenizer",
action="store_true",
help="If passed, will use a slow tokenizer (not backed by the 🤗 Tokenizers library).",
)
parser.add_argument(
"--per_device_train_batch_size",
type=int,
default=8,
help="Batch size (per device) for the training dataloader.",
)
parser.add_argument(
"--per_device_eval_batch_size",
type=int,
default=8,
help="Batch size (per device) for the evaluation dataloader.",
)
parser.add_argument(
"--learning_rate",
type=float,
default=5e-5,
help="Initial learning rate (after the potential warmup period) to use.",
)
parser.add_argument("--weight_decay", type=float, default=0.0, help="Weight decay to use.")
parser.add_argument("--num_train_epochs", type=int, default=3, help="Total number of training epochs to perform.")
parser.add_argument(
"--max_train_steps",
type=int,
default=None,
help="Total number of training steps to perform. If provided, overrides num_train_epochs.",
)
parser.add_argument(
"--gradient_accumulation_steps",
type=int,
default=1,
help="Number of updates steps to accumulate before performing a backward/update pass.",
)
parser.add_argument(
"--lr_scheduler_type",
type=SchedulerType,
default="linear",
help="The scheduler type to use.",
choices=["linear", "cosine", "cosine_with_restarts", "polynomial", "constant", "constant_with_warmup"],
)
parser.add_argument(
"--num_warmup_steps", type=int, default=0, help="Number of steps for the warmup in the lr scheduler."
)
parser.add_argument("--output_dir", type=str, default=None, help="Where to store the final model.")
parser.add_argument("--seed", type=int, default=None, help="A seed for reproducible training.")
parser.add_argument(
"--model_type",
type=str,
default=None,
help="Model type to use if training from scratch.",
choices=MODEL_TYPES,
)
parser.add_argument(
"--max_seq_length",
type=int,
default=None,
help="The maximum total input sequence length after tokenization. Sequences longer than this will be truncated.",
)
parser.add_argument(
"--line_by_line",
type=bool,
default=False,
help="Whether distinct lines of text in the dataset are to be handled as distinct sequences.",
)
parser.add_argument(
"--preprocessing_num_workers",
type=int,
default=None,
help="The number of processes to use for the preprocessing.",
)
parser.add_argument(
"--overwrite_cache", type=bool, default=False, help="Overwrite the cached training and evaluation sets"
)
parser.add_argument(
"--mlm_probability", type=float, default=0.15, help="Ratio of tokens to mask for masked language modeling loss"
)
parser.add_argument("--push_to_hub", action="store_true", help="Whether or not to push the model to the Hub.")
parser.add_argument(
"--hub_model_id", type=str, help="The name of the repository to keep in sync with the local `output_dir`."
)
parser.add_argument("--hub_token", type=str, help="The token to use to push to the Model Hub.")
args = parser.parse_args()
# Sanity checks
if args.dataset_name is None and args.train_file is None and args.validation_file is None:
raise ValueError("Need either a dataset name or a training/validation file.")
else:
if args.train_file is not None:
extension = args.train_file.split(".")[-1]
if extension not in ["csv", "json", "txt"]:
raise ValueError("`train_file` should be a csv, json or txt file.")
if args.validation_file is not None:
extension = args.validation_file.split(".")[-1]
if extension not in ["csv", "json", "txt"]:
raise ValueError("`validation_file` should be a csv, json or txt file.")
if args.push_to_hub:
assert args.output_dir is not None, "Need an `output_dir` to create a repo when `--push_to_hub` is passed."
return args
def main():
args = parse_args()
# Initialize the accelerator. We will let the accelerator handle device placement for us in this example.
accelerator = Accelerator()
# Make one log on every process with the configuration for debugging.
logging.basicConfig(
format="%(asctime)s - %(levelname)s - %(name)s - %(message)s",
datefmt="%m/%d/%Y %H:%M:%S",
level=logging.INFO,
)
logger.info(accelerator.state)
# Setup logging, we only want one process per machine to log things on the screen.
# accelerator.is_local_main_process is only True for one process per machine.
logger.setLevel(logging.INFO if accelerator.is_local_main_process else logging.ERROR)
if accelerator.is_local_main_process:
datasets.utils.logging.set_verbosity_warning()
transformers.utils.logging.set_verbosity_info()
else:
datasets.utils.logging.set_verbosity_error()
transformers.utils.logging.set_verbosity_error()
# If passed along, set the training seed now.
if args.seed is not None:
set_seed(args.seed)
# Handle the repository creation
if accelerator.is_main_process:
if args.push_to_hub:
if args.hub_model_id is None:
repo_name = get_full_repo_name(Path(args.output_dir).name, token=args.hub_token)
else:
repo_name = args.hub_model_id
repo = Repository(args.output_dir, clone_from=repo_name)
elif args.output_dir is not None:
os.makedirs(args.output_dir, exist_ok=True)
accelerator.wait_for_everyone()
# Get the datasets: you can either provide your own CSV/JSON/TXT training and evaluation files (see below)
# or just provide the name of one of the public datasets available on the hub at https://huggingface.co/datasets/
# (the dataset will be downloaded automatically from the datasets Hub).
#
# For CSV/JSON files, this script will use the column called 'text' or the first column if no column called
# 'text' is found. You can easily tweak this behavior (see below).
#
# In distributed training, the load_dataset function guarantee that only one local process can concurrently
# download the dataset.
if args.dataset_name is not None:
# Downloading and loading a dataset from the hub.
raw_datasets = load_dataset(args.dataset_name, args.dataset_config_name)
if "validation" not in raw_datasets.keys():
raw_datasets["validation"] = load_dataset(
args.dataset_name,
args.dataset_config_name,
split=f"train[:{args.validation_split_percentage}%]",
)
raw_datasets["train"] = load_dataset(
args.dataset_name,
args.dataset_config_name,
split=f"train[{args.validation_split_percentage}%:]",
)
else:
data_files = {}
if args.train_file is not None:
data_files["train"] = args.train_file
if args.validation_file is not None:
data_files["validation"] = args.validation_file
extension = args.train_file.split(".")[-1]
if extension == "txt":
extension = "text"
raw_datasets = load_dataset(extension, data_files=data_files)
# If no validation data is there, validation_split_percentage will be used to divide the dataset.
if "validation" not in raw_datasets.keys():
raw_datasets["validation"] = load_dataset(
extension,
data_files=data_files,
split=f"train[:{args.validation_split_percentage}%]",
)
raw_datasets["train"] = load_dataset(
extension,
data_files=data_files,
split=f"train[{args.validation_split_percentage}%:]",
)
# See more about loading any type of standard or custom dataset (from files, python dict, pandas DataFrame, etc) at
# https://huggingface.co/docs/datasets/loading_datasets.html.
# Load pretrained model and tokenizer
#
# In distributed training, the .from_pretrained methods guarantee that only one local process can concurrently
# download model & vocab.
if args.config_name:
config = AutoConfig.from_pretrained(args.config_name)
elif args.model_name_or_path:
config = AutoConfig.from_pretrained(args.model_name_or_path)
else:
config = CONFIG_MAPPING[args.model_type]()
logger.warning("You are instantiating a new config instance from scratch.")
if args.tokenizer_name:
tokenizer = AutoTokenizer.from_pretrained(args.tokenizer_name, use_fast=not args.use_slow_tokenizer)
elif args.model_name_or_path:
tokenizer = AutoTokenizer.from_pretrained(args.model_name_or_path, use_fast=not args.use_slow_tokenizer)
else:
raise ValueError(
"You are instantiating a new tokenizer from scratch. This is not supported by this script."
"You can do it from another script, save it, and load it from here, using --tokenizer_name."
)
if args.model_name_or_path:
model = AutoModelForMaskedLM.from_pretrained(
args.model_name_or_path,
from_tf=bool(".ckpt" in args.model_name_or_path),
config=config,
)
else:
logger.info("Training new model from scratch")
model = AutoModelForMaskedLM.from_config(config)
model.resize_token_embeddings(len(tokenizer))
# Preprocessing the datasets.
# First we tokenize all the texts.
column_names = raw_datasets["train"].column_names
text_column_name = "text" if "text" in column_names else column_names[0]
if args.max_seq_length is None:
max_seq_length = tokenizer.model_max_length
if max_seq_length > 1024:
logger.warning(
f"The tokenizer picked seems to have a very large `model_max_length` ({tokenizer.model_max_length}). "
"Picking 1024 instead. You can change that default value by passing --max_seq_length xxx."
)
max_seq_length = 1024
else:
if args.max_seq_length > tokenizer.model_max_length:
logger.warning(
f"The max_seq_length passed ({args.max_seq_length}) is larger than the maximum length for the"
f"model ({tokenizer.model_max_length}). Using max_seq_length={tokenizer.model_max_length}."
)
max_seq_length = min(args.max_seq_length, tokenizer.model_max_length)
if args.line_by_line:
# When using line_by_line, we just tokenize each nonempty line.
padding = "max_length" if args.pad_to_max_length else False
def tokenize_function(examples):
# Remove empty lines
examples[text_column_name] = [
line for line in examples[text_column_name] if len(line) > 0 and not line.isspace()
]
return tokenizer(
examples[text_column_name],
padding=padding,
truncation=True,
max_length=max_seq_length,
# We use this option because DataCollatorForLanguageModeling (see below) is more efficient when it
# receives the `special_tokens_mask`.
return_special_tokens_mask=True,
)
with accelerator.main_process_first():
tokenized_datasets = raw_datasets.map(
tokenize_function,
batched=True,
num_proc=args.preprocessing_num_workers,
remove_columns=[text_column_name],
load_from_cache_file=not args.overwrite_cache,
desc="Running tokenizer on dataset line_by_line",
)
else:
# Otherwise, we tokenize every text, then concatenate them together before splitting them in smaller parts.
# We use `return_special_tokens_mask=True` because DataCollatorForLanguageModeling (see below) is more
# efficient when it receives the `special_tokens_mask`.
def tokenize_function(examples):
return tokenizer(examples[text_column_name], return_special_tokens_mask=True)
with accelerator.main_process_first():
tokenized_datasets = raw_datasets.map(
tokenize_function,
batched=True,
num_proc=args.preprocessing_num_workers,
remove_columns=column_names,
load_from_cache_file=not args.overwrite_cache,
desc="Running tokenizer on every text in dataset",
)
# Main data processing function that will concatenate all texts from our dataset and generate chunks of
# max_seq_length.
def group_texts(examples):
# Concatenate all texts.
concatenated_examples = {k: list(chain(*examples[k])) for k in examples.keys()}
total_length = len(concatenated_examples[list(examples.keys())[0]])
# We drop the small remainder, we could add padding if the model supported it instead of this drop, you can
# customize this part to your needs.
if total_length >= max_seq_length:
total_length = (total_length // max_seq_length) * max_seq_length
# Split by chunks of max_len.
result = {
k: [t[i : i + max_seq_length] for i in range(0, total_length, max_seq_length)]
for k, t in concatenated_examples.items()
}
return result
# Note that with `batched=True`, this map processes 1,000 texts together, so group_texts throws away a
# remainder for each of those groups of 1,000 texts. You can adjust that batch_size here but a higher value
# might be slower to preprocess.
#
# To speed up this part, we use multiprocessing. See the documentation of the map method for more information:
# https://huggingface.co/docs/datasets/package_reference/main_classes.html#datasets.Dataset.map
with accelerator.main_process_first():
tokenized_datasets = tokenized_datasets.map(
group_texts,
batched=True,
num_proc=args.preprocessing_num_workers,
load_from_cache_file=not args.overwrite_cache,
desc=f"Grouping texts in chunks of {max_seq_length}",
)
train_dataset = tokenized_datasets["train"]
eval_dataset = tokenized_datasets["validation"]
# Log a few random samples from the training set:
for index in random.sample(range(len(train_dataset)), 3):
logger.info(f"Sample {index} of the training set: {train_dataset[index]}.")
# Data collator
# This one will take care of randomly masking the tokens.
data_collator = DataCollatorForLanguageModeling(tokenizer=tokenizer, mlm_probability=args.mlm_probability)
# DataLoaders creation:
train_dataloader = DataLoader(
train_dataset, shuffle=True, collate_fn=data_collator, batch_size=args.per_device_train_batch_size
)
eval_dataloader = DataLoader(eval_dataset, collate_fn=data_collator, batch_size=args.per_device_eval_batch_size)
# Optimizer
# Split weights in two groups, one with weight decay and the other not.
no_decay = ["bias", "LayerNorm.weight"]
optimizer_grouped_parameters = [
{
"params": [p for n, p in model.named_parameters() if not any(nd in n for nd in no_decay)],
"weight_decay": args.weight_decay,
},
{
"params": [p for n, p in model.named_parameters() if any(nd in n for nd in no_decay)],
"weight_decay": 0.0,
},
]
optimizer = AdamW(optimizer_grouped_parameters, lr=args.learning_rate)
# Prepare everything with our `accelerator`.
model, optimizer, train_dataloader, eval_dataloader = accelerator.prepare(
model, optimizer, train_dataloader, eval_dataloader
)
# On TPU, the tie weights in our model have been disconnected, so we need to restore the ties.
if accelerator.distributed_type == DistributedType.TPU:
model.tie_weights()
# Note -> the training dataloader needs to be prepared before we grab his length below (cause its length will be
# shorter in multiprocess)
# Scheduler and math around the number of training steps.
num_update_steps_per_epoch = math.ceil(len(train_dataloader) / args.gradient_accumulation_steps)
if args.max_train_steps is None:
args.max_train_steps = args.num_train_epochs * num_update_steps_per_epoch
else:
args.num_train_epochs = math.ceil(args.max_train_steps / num_update_steps_per_epoch)
lr_scheduler = get_scheduler(
name=args.lr_scheduler_type,
optimizer=optimizer,
num_warmup_steps=args.num_warmup_steps,
num_training_steps=args.max_train_steps,
)
# Train!
total_batch_size = args.per_device_train_batch_size * accelerator.num_processes * args.gradient_accumulation_steps
logger.info("***** Running training *****")
logger.info(f" Num examples = {len(train_dataset)}")
logger.info(f" Num Epochs = {args.num_train_epochs}")
logger.info(f" Instantaneous batch size per device = {args.per_device_train_batch_size}")
logger.info(f" Total train batch size (w. parallel, distributed & accumulation) = {total_batch_size}")
logger.info(f" Gradient Accumulation steps = {args.gradient_accumulation_steps}")
logger.info(f" Total optimization steps = {args.max_train_steps}")
# Only show the progress bar once on each machine.
progress_bar = tqdm(range(args.max_train_steps), disable=not accelerator.is_local_main_process)
completed_steps = 0
for epoch in range(args.num_train_epochs):
model.train()
for step, batch in enumerate(train_dataloader):
outputs = model(**batch)
loss = outputs.loss
loss = loss / args.gradient_accumulation_steps
accelerator.backward(loss)
if step % args.gradient_accumulation_steps == 0 or step == len(train_dataloader) - 1:
optimizer.step()
lr_scheduler.step()
optimizer.zero_grad()
progress_bar.update(1)
completed_steps += 1
if completed_steps >= args.max_train_steps:
break
model.eval()
losses = []
for step, batch in enumerate(eval_dataloader):
with torch.no_grad():
outputs = model(**batch)
loss = outputs.loss
losses.append(accelerator.gather(loss.repeat(args.per_device_eval_batch_size)))
losses = torch.cat(losses)
losses = losses[: len(eval_dataset)]
try:
perplexity = math.exp(torch.mean(losses))
except OverflowError:
perplexity = float("inf")
logger.info(f"epoch {epoch}: perplexity: {perplexity}")
if args.push_to_hub and epoch < args.num_train_epochs - 1:
accelerator.wait_for_everyone()
unwrapped_model = accelerator.unwrap_model(model)
unwrapped_model.save_pretrained(args.output_dir, save_function=accelerator.save)
if accelerator.is_main_process:
tokenizer.save_pretrained(args.output_dir)
repo.push_to_hub(
commit_message=f"Training in progress epoch {epoch}", blocking=False, auto_lfs_prune=True
)
if args.output_dir is not None:
accelerator.wait_for_everyone()
unwrapped_model = accelerator.unwrap_model(model)
unwrapped_model.save_pretrained(args.output_dir, save_function=accelerator.save)
if accelerator.is_main_process:
tokenizer.save_pretrained(args.output_dir)
if args.push_to_hub:
repo.push_to_hub(commit_message="End of training", auto_lfs_prune=True)
if __name__ == "__main__":
main()
| 24,041 | 41.327465 | 121 | py |
robust-transformers | robust-transformers-main/examples/pytorch/language-modeling/run_clm.py | #!/usr/bin/env python
# coding=utf-8
# Copyright 2020 The HuggingFace Inc. team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
"""
Fine-tuning the library models for causal language modeling (GPT, GPT-2, CTRL, ...) on a text file or a dataset.
Here is the full list of checkpoints on the hub that can be fine-tuned by this script:
https://huggingface.co/models?filter=text-generation
"""
# You can also adapt this script on your own causal language modeling task. Pointers for this are left as comments.
import logging
import math
import os
import sys
from dataclasses import dataclass, field
from itertools import chain
from typing import Optional
import datasets
from datasets import load_dataset, load_metric
import transformers
from transformers import (
CONFIG_MAPPING,
MODEL_FOR_CAUSAL_LM_MAPPING,
AutoConfig,
AutoModelForCausalLM,
AutoTokenizer,
HfArgumentParser,
Trainer,
TrainingArguments,
default_data_collator,
set_seed,
)
from transformers.testing_utils import CaptureLogger
from transformers.trainer_utils import get_last_checkpoint
from transformers.utils import check_min_version
from transformers.utils.versions import require_version
# Will error if the minimal version of Transformers is not installed. Remove at your own risks.
check_min_version("4.18.0.dev0")
require_version("datasets>=1.8.0", "To fix: pip install -r examples/pytorch/language-modeling/requirements.txt")
logger = logging.getLogger(__name__)
MODEL_CONFIG_CLASSES = list(MODEL_FOR_CAUSAL_LM_MAPPING.keys())
MODEL_TYPES = tuple(conf.model_type for conf in MODEL_CONFIG_CLASSES)
@dataclass
class ModelArguments:
"""
Arguments pertaining to which model/config/tokenizer we are going to fine-tune, or train from scratch.
"""
model_name_or_path: Optional[str] = field(
default=None,
metadata={
"help": "The model checkpoint for weights initialization."
"Don't set if you want to train a model from scratch."
},
)
model_type: Optional[str] = field(
default=None,
metadata={"help": "If training from scratch, pass a model type from the list: " + ", ".join(MODEL_TYPES)},
)
config_overrides: Optional[str] = field(
default=None,
metadata={
"help": "Override some existing default config settings when a model is trained from scratch. Example: "
"n_embd=10,resid_pdrop=0.2,scale_attn_weights=false,summary_type=cls_index"
},
)
config_name: Optional[str] = field(
default=None, metadata={"help": "Pretrained config name or path if not the same as model_name"}
)
tokenizer_name: Optional[str] = field(
default=None, metadata={"help": "Pretrained tokenizer name or path if not the same as model_name"}
)
cache_dir: Optional[str] = field(
default=None,
metadata={"help": "Where do you want to store the pretrained models downloaded from huggingface.co"},
)
use_fast_tokenizer: bool = field(
default=True,
metadata={"help": "Whether to use one of the fast tokenizer (backed by the tokenizers library) or not."},
)
model_revision: str = field(
default="main",
metadata={"help": "The specific model version to use (can be a branch name, tag name or commit id)."},
)
use_auth_token: bool = field(
default=False,
metadata={
"help": "Will use the token generated when running `transformers-cli login` (necessary to use this script "
"with private models)."
},
)
def __post_init__(self):
if self.config_overrides is not None and (self.config_name is not None or self.model_name_or_path is not None):
raise ValueError(
"--config_overrides can't be used in combination with --config_name or --model_name_or_path"
)
@dataclass
class DataTrainingArguments:
"""
Arguments pertaining to what data we are going to input our model for training and eval.
"""
dataset_name: Optional[str] = field(
default=None, metadata={"help": "The name of the dataset to use (via the datasets library)."}
)
dataset_config_name: Optional[str] = field(
default=None, metadata={"help": "The configuration name of the dataset to use (via the datasets library)."}
)
train_file: Optional[str] = field(default=None, metadata={"help": "The input training data file (a text file)."})
validation_file: Optional[str] = field(
default=None,
metadata={"help": "An optional input evaluation data file to evaluate the perplexity on (a text file)."},
)
max_train_samples: Optional[int] = field(
default=None,
metadata={
"help": "For debugging purposes or quicker training, truncate the number of training examples to this "
"value if set."
},
)
max_eval_samples: Optional[int] = field(
default=None,
metadata={
"help": "For debugging purposes or quicker training, truncate the number of evaluation examples to this "
"value if set."
},
)
block_size: Optional[int] = field(
default=None,
metadata={
"help": "Optional input sequence length after tokenization. "
"The training dataset will be truncated in block of this size for training. "
"Default to the model max input length for single sentence inputs (take into account special tokens)."
},
)
overwrite_cache: bool = field(
default=False, metadata={"help": "Overwrite the cached training and evaluation sets"}
)
validation_split_percentage: Optional[int] = field(
default=5,
metadata={
"help": "The percentage of the train set used as validation set in case there's no validation split"
},
)
preprocessing_num_workers: Optional[int] = field(
default=None,
metadata={"help": "The number of processes to use for the preprocessing."},
)
keep_linebreaks: bool = field(
default=True, metadata={"help": "Whether to keep line breaks when using TXT files or not."}
)
def __post_init__(self):
if self.dataset_name is None and self.train_file is None and self.validation_file is None:
raise ValueError("Need either a dataset name or a training/validation file.")
else:
if self.train_file is not None:
extension = self.train_file.split(".")[-1]
assert extension in ["csv", "json", "txt"], "`train_file` should be a csv, a json or a txt file."
if self.validation_file is not None:
extension = self.validation_file.split(".")[-1]
assert extension in ["csv", "json", "txt"], "`validation_file` should be a csv, a json or a txt file."
def main():
# See all possible arguments in src/transformers/training_args.py
# or by passing the --help flag to this script.
# We now keep distinct sets of args, for a cleaner separation of concerns.
parser = HfArgumentParser((ModelArguments, DataTrainingArguments, TrainingArguments))
if len(sys.argv) == 2 and sys.argv[1].endswith(".json"):
# If we pass only one argument to the script and it's the path to a json file,
# let's parse it to get our arguments.
model_args, data_args, training_args = parser.parse_json_file(json_file=os.path.abspath(sys.argv[1]))
else:
model_args, data_args, training_args = parser.parse_args_into_dataclasses()
# Setup logging
logging.basicConfig(
format="%(asctime)s - %(levelname)s - %(name)s - %(message)s",
datefmt="%m/%d/%Y %H:%M:%S",
handlers=[logging.StreamHandler(sys.stdout)],
)
log_level = training_args.get_process_log_level()
logger.setLevel(log_level)
datasets.utils.logging.set_verbosity(log_level)
transformers.utils.logging.set_verbosity(log_level)
transformers.utils.logging.enable_default_handler()
transformers.utils.logging.enable_explicit_format()
# Log on each process the small summary:
logger.warning(
f"Process rank: {training_args.local_rank}, device: {training_args.device}, n_gpu: {training_args.n_gpu}"
+ f"distributed training: {bool(training_args.local_rank != -1)}, 16-bits training: {training_args.fp16}"
)
logger.info(f"Training/evaluation parameters {training_args}")
# Detecting last checkpoint.
last_checkpoint = None
if os.path.isdir(training_args.output_dir) and training_args.do_train and not training_args.overwrite_output_dir:
last_checkpoint = get_last_checkpoint(training_args.output_dir)
if last_checkpoint is None and len(os.listdir(training_args.output_dir)) > 0:
raise ValueError(
f"Output directory ({training_args.output_dir}) already exists and is not empty. "
"Use --overwrite_output_dir to overcome."
)
elif last_checkpoint is not None and training_args.resume_from_checkpoint is None:
logger.info(
f"Checkpoint detected, resuming training at {last_checkpoint}. To avoid this behavior, change "
"the `--output_dir` or add `--overwrite_output_dir` to train from scratch."
)
# Set seed before initializing model.
set_seed(training_args.seed)
# Get the datasets: you can either provide your own CSV/JSON/TXT training and evaluation files (see below)
# or just provide the name of one of the public datasets available on the hub at https://huggingface.co/datasets/
# (the dataset will be downloaded automatically from the datasets Hub).
#
# For CSV/JSON files, this script will use the column called 'text' or the first column if no column called
# 'text' is found. You can easily tweak this behavior (see below).
#
# In distributed training, the load_dataset function guarantee that only one local process can concurrently
# download the dataset.
if data_args.dataset_name is not None:
# Downloading and loading a dataset from the hub.
raw_datasets = load_dataset(
data_args.dataset_name, data_args.dataset_config_name, cache_dir=model_args.cache_dir
)
if "validation" not in raw_datasets.keys():
raw_datasets["validation"] = load_dataset(
data_args.dataset_name,
data_args.dataset_config_name,
split=f"train[:{data_args.validation_split_percentage}%]",
cache_dir=model_args.cache_dir,
)
raw_datasets["train"] = load_dataset(
data_args.dataset_name,
data_args.dataset_config_name,
split=f"train[{data_args.validation_split_percentage}%:]",
cache_dir=model_args.cache_dir,
)
else:
data_files = {}
dataset_args = {}
if data_args.train_file is not None:
data_files["train"] = data_args.train_file
if data_args.validation_file is not None:
data_files["validation"] = data_args.validation_file
extension = (
data_args.train_file.split(".")[-1]
if data_args.train_file is not None
else data_args.validation_file.split(".")[-1]
)
if extension == "txt":
extension = "text"
dataset_args["keep_linebreaks"] = data_args.keep_linebreaks
raw_datasets = load_dataset(extension, data_files=data_files, cache_dir=model_args.cache_dir, **dataset_args)
# If no validation data is there, validation_split_percentage will be used to divide the dataset.
if "validation" not in raw_datasets.keys():
raw_datasets["validation"] = load_dataset(
extension,
data_files=data_files,
split=f"train[:{data_args.validation_split_percentage}%]",
cache_dir=model_args.cache_dir,
**dataset_args,
)
raw_datasets["train"] = load_dataset(
extension,
data_files=data_files,
split=f"train[{data_args.validation_split_percentage}%:]",
cache_dir=model_args.cache_dir,
**dataset_args,
)
# See more about loading any type of standard or custom dataset (from files, python dict, pandas DataFrame, etc) at
# https://huggingface.co/docs/datasets/loading_datasets.html.
# Load pretrained model and tokenizer
#
# Distributed training:
# The .from_pretrained methods guarantee that only one local process can concurrently
# download model & vocab.
config_kwargs = {
"cache_dir": model_args.cache_dir,
"revision": model_args.model_revision,
"use_auth_token": True if model_args.use_auth_token else None,
}
if model_args.config_name:
config = AutoConfig.from_pretrained(model_args.config_name, **config_kwargs)
elif model_args.model_name_or_path:
config = AutoConfig.from_pretrained(model_args.model_name_or_path, **config_kwargs)
else:
config = CONFIG_MAPPING[model_args.model_type]()
logger.warning("You are instantiating a new config instance from scratch.")
if model_args.config_overrides is not None:
logger.info(f"Overriding config: {model_args.config_overrides}")
config.update_from_string(model_args.config_overrides)
logger.info(f"New config: {config}")
tokenizer_kwargs = {
"cache_dir": model_args.cache_dir,
"use_fast": model_args.use_fast_tokenizer,
"revision": model_args.model_revision,
"use_auth_token": True if model_args.use_auth_token else None,
}
if model_args.tokenizer_name:
tokenizer = AutoTokenizer.from_pretrained(model_args.tokenizer_name, **tokenizer_kwargs)
elif model_args.model_name_or_path:
tokenizer = AutoTokenizer.from_pretrained(model_args.model_name_or_path, **tokenizer_kwargs)
else:
raise ValueError(
"You are instantiating a new tokenizer from scratch. This is not supported by this script."
"You can do it from another script, save it, and load it from here, using --tokenizer_name."
)
if model_args.model_name_or_path:
model = AutoModelForCausalLM.from_pretrained(
model_args.model_name_or_path,
from_tf=bool(".ckpt" in model_args.model_name_or_path),
config=config,
cache_dir=model_args.cache_dir,
revision=model_args.model_revision,
use_auth_token=True if model_args.use_auth_token else None,
)
else:
model = AutoModelForCausalLM.from_config(config)
n_params = sum(dict((p.data_ptr(), p.numel()) for p in model.parameters()).values())
logger.info(f"Training new model from scratch - Total size={n_params/2**20:.2f}M params")
model.resize_token_embeddings(len(tokenizer))
# Preprocessing the datasets.
# First we tokenize all the texts.
if training_args.do_train:
column_names = raw_datasets["train"].column_names
else:
column_names = raw_datasets["validation"].column_names
text_column_name = "text" if "text" in column_names else column_names[0]
# since this will be pickled to avoid _LazyModule error in Hasher force logger loading before tokenize_function
tok_logger = transformers.utils.logging.get_logger("transformers.tokenization_utils_base")
def tokenize_function(examples):
with CaptureLogger(tok_logger) as cl:
output = tokenizer(examples[text_column_name])
# clm input could be much much longer than block_size
if "Token indices sequence length is longer than the" in cl.out:
tok_logger.warning(
"^^^^^^^^^^^^^^^^ Please ignore the warning above - this long input will be chunked into smaller bits before being passed to the model."
)
return output
with training_args.main_process_first(desc="dataset map tokenization"):
tokenized_datasets = raw_datasets.map(
tokenize_function,
batched=True,
num_proc=data_args.preprocessing_num_workers,
remove_columns=column_names,
load_from_cache_file=not data_args.overwrite_cache,
desc="Running tokenizer on dataset",
)
if data_args.block_size is None:
block_size = tokenizer.model_max_length
if block_size > 1024:
logger.warning(
f"The tokenizer picked seems to have a very large `model_max_length` ({tokenizer.model_max_length}). "
"Picking 1024 instead. You can change that default value by passing --block_size xxx."
)
block_size = 1024
else:
if data_args.block_size > tokenizer.model_max_length:
logger.warning(
f"The block_size passed ({data_args.block_size}) is larger than the maximum length for the model"
f"({tokenizer.model_max_length}). Using block_size={tokenizer.model_max_length}."
)
block_size = min(data_args.block_size, tokenizer.model_max_length)
# Main data processing function that will concatenate all texts from our dataset and generate chunks of block_size.
def group_texts(examples):
# Concatenate all texts.
concatenated_examples = {k: list(chain(*examples[k])) for k in examples.keys()}
total_length = len(concatenated_examples[list(examples.keys())[0]])
# We drop the small remainder, we could add padding if the model supported it instead of this drop, you can
# customize this part to your needs.
if total_length >= block_size:
total_length = (total_length // block_size) * block_size
# Split by chunks of max_len.
result = {
k: [t[i : i + block_size] for i in range(0, total_length, block_size)]
for k, t in concatenated_examples.items()
}
result["labels"] = result["input_ids"].copy()
return result
# Note that with `batched=True`, this map processes 1,000 texts together, so group_texts throws away a remainder
# for each of those groups of 1,000 texts. You can adjust that batch_size here but a higher value might be slower
# to preprocess.
#
# To speed up this part, we use multiprocessing. See the documentation of the map method for more information:
# https://huggingface.co/docs/datasets/package_reference/main_classes.html#datasets.Dataset.map
with training_args.main_process_first(desc="grouping texts together"):
lm_datasets = tokenized_datasets.map(
group_texts,
batched=True,
num_proc=data_args.preprocessing_num_workers,
load_from_cache_file=not data_args.overwrite_cache,
desc=f"Grouping texts in chunks of {block_size}",
)
if training_args.do_train:
if "train" not in tokenized_datasets:
raise ValueError("--do_train requires a train dataset")
train_dataset = lm_datasets["train"]
if data_args.max_train_samples is not None:
train_dataset = train_dataset.select(range(data_args.max_train_samples))
if training_args.do_eval:
if "validation" not in tokenized_datasets:
raise ValueError("--do_eval requires a validation dataset")
eval_dataset = lm_datasets["validation"]
if data_args.max_eval_samples is not None:
eval_dataset = eval_dataset.select(range(data_args.max_eval_samples))
def preprocess_logits_for_metrics(logits, labels):
if isinstance(logits, tuple):
# Depending on the model and config, logits may contain extra tensors,
# like past_key_values, but logits always come first
logits = logits[0]
return logits.argmax(dim=-1)
metric = load_metric("accuracy")
def compute_metrics(eval_preds):
preds, labels = eval_preds
# preds have the same shape as the labels, after the argmax(-1) has been calculated
# by preprocess_logits_for_metrics but we need to shift the labels
labels = labels[:, 1:].reshape(-1)
preds = preds[:, :-1].reshape(-1)
return metric.compute(predictions=preds, references=labels)
# Initialize our Trainer
trainer = Trainer(
model=model,
args=training_args,
train_dataset=train_dataset if training_args.do_train else None,
eval_dataset=eval_dataset if training_args.do_eval else None,
tokenizer=tokenizer,
# Data collator will default to DataCollatorWithPadding, so we change it.
data_collator=default_data_collator,
compute_metrics=compute_metrics if training_args.do_eval else None,
preprocess_logits_for_metrics=preprocess_logits_for_metrics if training_args.do_eval else None,
)
# Training
if training_args.do_train:
checkpoint = None
if training_args.resume_from_checkpoint is not None:
checkpoint = training_args.resume_from_checkpoint
elif last_checkpoint is not None:
checkpoint = last_checkpoint
train_result = trainer.train(resume_from_checkpoint=checkpoint)
trainer.save_model() # Saves the tokenizer too for easy upload
metrics = train_result.metrics
max_train_samples = (
data_args.max_train_samples if data_args.max_train_samples is not None else len(train_dataset)
)
metrics["train_samples"] = min(max_train_samples, len(train_dataset))
trainer.log_metrics("train", metrics)
trainer.save_metrics("train", metrics)
trainer.save_state()
# Evaluation
if training_args.do_eval:
logger.info("*** Evaluate ***")
metrics = trainer.evaluate()
max_eval_samples = data_args.max_eval_samples if data_args.max_eval_samples is not None else len(eval_dataset)
metrics["eval_samples"] = min(max_eval_samples, len(eval_dataset))
try:
perplexity = math.exp(metrics["eval_loss"])
except OverflowError:
perplexity = float("inf")
metrics["perplexity"] = perplexity
trainer.log_metrics("eval", metrics)
trainer.save_metrics("eval", metrics)
kwargs = {"finetuned_from": model_args.model_name_or_path, "tasks": "text-generation"}
if data_args.dataset_name is not None:
kwargs["dataset_tags"] = data_args.dataset_name
if data_args.dataset_config_name is not None:
kwargs["dataset_args"] = data_args.dataset_config_name
kwargs["dataset"] = f"{data_args.dataset_name} {data_args.dataset_config_name}"
else:
kwargs["dataset"] = data_args.dataset_name
if training_args.push_to_hub:
trainer.push_to_hub(**kwargs)
else:
trainer.create_model_card(**kwargs)
def _mp_fn(index):
# For xla_spawn (TPUs)
main()
if __name__ == "__main__":
main()
| 23,726 | 42.456044 | 152 | py |
robust-transformers | robust-transformers-main/examples/pytorch/audio-classification/run_audio_classification.py | #!/usr/bin/env python
# coding=utf-8
# Copyright 2021 The HuggingFace Inc. team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
import logging
import os
import sys
import warnings
from dataclasses import dataclass, field
from random import randint
from typing import Optional
import datasets
import numpy as np
from datasets import DatasetDict, load_dataset
import transformers
from transformers import (
AutoConfig,
AutoFeatureExtractor,
AutoModelForAudioClassification,
HfArgumentParser,
Trainer,
TrainingArguments,
set_seed,
)
from transformers.trainer_utils import get_last_checkpoint
from transformers.utils import check_min_version
from transformers.utils.versions import require_version
logger = logging.getLogger(__name__)
# Will error if the minimal version of Transformers is not installed. Remove at your own risks.
check_min_version("4.18.0.dev0")
require_version("datasets>=1.14.0", "To fix: pip install -r examples/pytorch/audio-classification/requirements.txt")
def random_subsample(wav: np.ndarray, max_length: float, sample_rate: int = 16000):
"""Randomly sample chunks of `max_length` seconds from the input audio"""
sample_length = int(round(sample_rate * max_length))
if len(wav) <= sample_length:
return wav
random_offset = randint(0, len(wav) - sample_length - 1)
return wav[random_offset : random_offset + sample_length]
@dataclass
class DataTrainingArguments:
"""
Arguments pertaining to what data we are going to input our model for training and eval.
Using `HfArgumentParser` we can turn this class
into argparse arguments to be able to specify them on
the command line.
"""
dataset_name: Optional[str] = field(default=None, metadata={"help": "Name of a dataset from the datasets package"})
dataset_config_name: Optional[str] = field(
default=None, metadata={"help": "The configuration name of the dataset to use (via the datasets library)."}
)
train_file: Optional[str] = field(
default=None, metadata={"help": "A file containing the training audio paths and labels."}
)
eval_file: Optional[str] = field(
default=None, metadata={"help": "A file containing the validation audio paths and labels."}
)
train_split_name: str = field(
default="train",
metadata={
"help": "The name of the training data set split to use (via the datasets library). Defaults to 'train'"
},
)
eval_split_name: str = field(
default="validation",
metadata={
"help": "The name of the training data set split to use (via the datasets library). Defaults to "
"'validation'"
},
)
audio_column_name: str = field(
default="audio",
metadata={"help": "The name of the dataset column containing the audio data. Defaults to 'audio'"},
)
label_column_name: str = field(
default="label", metadata={"help": "The name of the dataset column containing the labels. Defaults to 'label'"}
)
max_train_samples: Optional[int] = field(
default=None,
metadata={
"help": "For debugging purposes or quicker training, truncate the number of training examples to this "
"value if set."
},
)
max_eval_samples: Optional[int] = field(
default=None,
metadata={
"help": "For debugging purposes or quicker training, truncate the number of evaluation examples to this "
"value if set."
},
)
max_length_seconds: float = field(
default=20,
metadata={"help": "Audio clips will be randomly cut to this length during training if the value is set."},
)
@dataclass
class ModelArguments:
"""
Arguments pertaining to which model/config/tokenizer we are going to fine-tune from.
"""
model_name_or_path: str = field(
default="facebook/wav2vec2-base",
metadata={"help": "Path to pretrained model or model identifier from huggingface.co/models"},
)
config_name: Optional[str] = field(
default=None, metadata={"help": "Pretrained config name or path if not the same as model_name"}
)
cache_dir: Optional[str] = field(
default=None, metadata={"help": "Where do you want to store the pretrained models downloaded from the Hub"}
)
model_revision: str = field(
default="main",
metadata={"help": "The specific model version to use (can be a branch name, tag name or commit id)."},
)
feature_extractor_name: Optional[str] = field(
default=None, metadata={"help": "Name or path of preprocessor config."}
)
freeze_feature_encoder: bool = field(
default=True, metadata={"help": "Whether to freeze the feature encoder layers of the model."}
)
attention_mask: bool = field(
default=True, metadata={"help": "Whether to generate an attention mask in the feature extractor."}
)
use_auth_token: bool = field(
default=False,
metadata={
"help": "Will use the token generated when running `transformers-cli login` (necessary to use this script "
"with private models)."
},
)
freeze_feature_extractor: Optional[bool] = field(
default=None, metadata={"help": "Whether to freeze the feature extractor layers of the model."}
)
def __post_init__(self):
if not self.freeze_feature_extractor and self.freeze_feature_encoder:
warnings.warn(
"The argument `--freeze_feature_extractor` is deprecated and "
"will be removed in a future version. Use `--freeze_feature_encoder`"
"instead. Setting `freeze_feature_encoder==True`.",
FutureWarning,
)
if self.freeze_feature_extractor and not self.freeze_feature_encoder:
raise ValueError(
"The argument `--freeze_feature_extractor` is deprecated and "
"should not be used in combination with `--freeze_feature_encoder`."
"Only make use of `--freeze_feature_encoder`."
)
def main():
# See all possible arguments in src/transformers/training_args.py
# or by passing the --help flag to this script.
# We now keep distinct sets of args, for a cleaner separation of concerns.
parser = HfArgumentParser((ModelArguments, DataTrainingArguments, TrainingArguments))
if len(sys.argv) == 2 and sys.argv[1].endswith(".json"):
# If we pass only one argument to the script and it's the path to a json file,
# let's parse it to get our arguments.
model_args, data_args, training_args = parser.parse_json_file(json_file=os.path.abspath(sys.argv[1]))
else:
model_args, data_args, training_args = parser.parse_args_into_dataclasses()
# Setup logging
logging.basicConfig(
format="%(asctime)s - %(levelname)s - %(name)s - %(message)s",
datefmt="%m/%d/%Y %H:%M:%S",
handlers=[logging.StreamHandler(sys.stdout)],
)
log_level = training_args.get_process_log_level()
logger.setLevel(log_level)
transformers.utils.logging.set_verbosity(log_level)
transformers.utils.logging.enable_default_handler()
transformers.utils.logging.enable_explicit_format()
# Log on each process the small summary:
logger.warning(
f"Process rank: {training_args.local_rank}, device: {training_args.device}, n_gpu: {training_args.n_gpu} "
+ f"distributed training: {bool(training_args.local_rank != -1)}, 16-bits training: {training_args.fp16}"
)
logger.info(f"Training/evaluation parameters {training_args}")
# Set seed before initializing model.
set_seed(training_args.seed)
# Detecting last checkpoint.
last_checkpoint = None
if os.path.isdir(training_args.output_dir) and training_args.do_train and not training_args.overwrite_output_dir:
last_checkpoint = get_last_checkpoint(training_args.output_dir)
if last_checkpoint is None and len(os.listdir(training_args.output_dir)) > 0:
raise ValueError(
f"Output directory ({training_args.output_dir}) already exists and is not empty. "
"Use --overwrite_output_dir to train from scratch."
)
elif last_checkpoint is not None and training_args.resume_from_checkpoint is None:
logger.info(
f"Checkpoint detected, resuming training at {last_checkpoint}. To avoid this behavior, change "
"the `--output_dir` or add `--overwrite_output_dir` to train from scratch."
)
# Initialize our dataset and prepare it for the audio classification task.
raw_datasets = DatasetDict()
raw_datasets["train"] = load_dataset(
data_args.dataset_name, data_args.dataset_config_name, split=data_args.train_split_name
)
raw_datasets["eval"] = load_dataset(
data_args.dataset_name, data_args.dataset_config_name, split=data_args.eval_split_name
)
if data_args.audio_column_name not in raw_datasets["train"].column_names:
raise ValueError(
f"--audio_column_name {data_args.audio_column_name} not found in dataset '{data_args.dataset_name}'. "
"Make sure to set `--audio_column_name` to the correct audio column - one of "
f"{', '.join(raw_datasets['train'].column_names)}."
)
if data_args.label_column_name not in raw_datasets["train"].column_names:
raise ValueError(
f"--label_column_name {data_args.label_column_name} not found in dataset '{data_args.dataset_name}'. "
"Make sure to set `--label_column_name` to the correct text column - one of "
f"{', '.join(raw_datasets['train'].column_names)}."
)
# Setting `return_attention_mask=True` is the way to get a correctly masked mean-pooling over
# transformer outputs in the classifier, but it doesn't always lead to better accuracy
feature_extractor = AutoFeatureExtractor.from_pretrained(
model_args.feature_extractor_name or model_args.model_name_or_path,
return_attention_mask=model_args.attention_mask,
cache_dir=model_args.cache_dir,
revision=model_args.model_revision,
use_auth_token=True if model_args.use_auth_token else None,
)
# `datasets` takes care of automatically loading and resampling the audio,
# so we just need to set the correct target sampling rate.
raw_datasets = raw_datasets.cast_column(
data_args.audio_column_name, datasets.features.Audio(sampling_rate=feature_extractor.sampling_rate)
)
def train_transforms(batch):
"""Apply train_transforms across a batch."""
output_batch = {"input_values": []}
for audio in batch[data_args.audio_column_name]:
wav = random_subsample(
audio["array"], max_length=data_args.max_length_seconds, sample_rate=feature_extractor.sampling_rate
)
output_batch["input_values"].append(wav)
output_batch["labels"] = [label for label in batch[data_args.label_column_name]]
return output_batch
def val_transforms(batch):
"""Apply val_transforms across a batch."""
output_batch = {"input_values": []}
for audio in batch[data_args.audio_column_name]:
wav = audio["array"]
output_batch["input_values"].append(wav)
output_batch["labels"] = [label for label in batch[data_args.label_column_name]]
return output_batch
# Prepare label mappings.
# We'll include these in the model's config to get human readable labels in the Inference API.
labels = raw_datasets["train"].features[data_args.label_column_name].names
label2id, id2label = dict(), dict()
for i, label in enumerate(labels):
label2id[label] = str(i)
id2label[str(i)] = label
# Load the accuracy metric from the datasets package
metric = datasets.load_metric("accuracy")
# Define our compute_metrics function. It takes an `EvalPrediction` object (a namedtuple with
# `predictions` and `label_ids` fields) and has to return a dictionary string to float.
def compute_metrics(eval_pred):
"""Computes accuracy on a batch of predictions"""
predictions = np.argmax(eval_pred.predictions, axis=1)
return metric.compute(predictions=predictions, references=eval_pred.label_ids)
config = AutoConfig.from_pretrained(
model_args.config_name or model_args.model_name_or_path,
num_labels=len(labels),
label2id=label2id,
id2label=id2label,
finetuning_task="audio-classification",
cache_dir=model_args.cache_dir,
revision=model_args.model_revision,
use_auth_token=True if model_args.use_auth_token else None,
)
model = AutoModelForAudioClassification.from_pretrained(
model_args.model_name_or_path,
from_tf=bool(".ckpt" in model_args.model_name_or_path),
config=config,
cache_dir=model_args.cache_dir,
revision=model_args.model_revision,
use_auth_token=True if model_args.use_auth_token else None,
)
# freeze the convolutional waveform encoder
if model_args.freeze_feature_encoder:
model.freeze_feature_encoder()
if training_args.do_train:
if data_args.max_train_samples is not None:
raw_datasets["train"] = (
raw_datasets["train"].shuffle(seed=training_args.seed).select(range(data_args.max_train_samples))
)
# Set the training transforms
raw_datasets["train"].set_transform(train_transforms, output_all_columns=False)
if training_args.do_eval:
if data_args.max_eval_samples is not None:
raw_datasets["eval"] = (
raw_datasets["eval"].shuffle(seed=training_args.seed).select(range(data_args.max_eval_samples))
)
# Set the validation transforms
raw_datasets["eval"].set_transform(val_transforms, output_all_columns=False)
# Initialize our trainer
trainer = Trainer(
model=model,
args=training_args,
train_dataset=raw_datasets["train"] if training_args.do_train else None,
eval_dataset=raw_datasets["eval"] if training_args.do_eval else None,
compute_metrics=compute_metrics,
tokenizer=feature_extractor,
)
# Training
if training_args.do_train:
checkpoint = None
if training_args.resume_from_checkpoint is not None:
checkpoint = training_args.resume_from_checkpoint
elif last_checkpoint is not None:
checkpoint = last_checkpoint
train_result = trainer.train(resume_from_checkpoint=checkpoint)
trainer.save_model()
trainer.log_metrics("train", train_result.metrics)
trainer.save_metrics("train", train_result.metrics)
trainer.save_state()
# Evaluation
if training_args.do_eval:
metrics = trainer.evaluate()
trainer.log_metrics("eval", metrics)
trainer.save_metrics("eval", metrics)
# Write model card and (optionally) push to hub
kwargs = {
"finetuned_from": model_args.model_name_or_path,
"tasks": "audio-classification",
"dataset": data_args.dataset_name,
"tags": ["audio-classification"],
}
if training_args.push_to_hub:
trainer.push_to_hub(**kwargs)
else:
trainer.create_model_card(**kwargs)
if __name__ == "__main__":
main()
| 16,086 | 40.354756 | 119 | py |
robust-transformers | robust-transformers-main/examples/pytorch/contrastive-image-text/run_clip.py | #!/usr/bin/env python
# coding=utf-8
# Copyright 2022 The HuggingFace Team All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
"""
Training a CLIP like dual encoder models using text and vision encoders in the library.
The script can be used to train CLIP like models for languages other than English by using
a text encoder pre-trained in the desired language. Currently this script supports the following vision
and text models:
Vision models: ViT(https://huggingface.co/models?filter=vit), CLIP (https://huggingface.co/models?filter=clip)
Text models: BERT, ROBERTa (https://huggingface.co/models?filter=fill-mask)
"""
import logging
import os
import sys
from dataclasses import dataclass, field
from typing import Optional
import torch
from datasets import load_dataset
from PIL import Image
from torchvision.io import ImageReadMode, read_image
from torchvision.transforms import CenterCrop, ConvertImageDtype, Normalize, Resize
from torchvision.transforms.functional import InterpolationMode
import transformers
from transformers import (
AutoFeatureExtractor,
AutoModel,
AutoTokenizer,
HfArgumentParser,
Trainer,
TrainingArguments,
set_seed,
)
from transformers.trainer_utils import get_last_checkpoint
from transformers.utils import check_min_version
from transformers.utils.versions import require_version
logger = logging.getLogger(__name__)
# Will error if the minimal version of Transformers is not installed. Remove at your own risks.
check_min_version("4.18.0.dev0")
require_version("datasets>=1.8.0", "To fix: pip install -r examples/pytorch/contrastive-image-text/requirements.txt")
@dataclass
class ModelArguments:
"""
Arguments pertaining to which model/config/tokenizer we are going to fine-tune, or train from scratch.
"""
model_name_or_path: str = field(
metadata={"help": "Path to pretrained model or model identifier from huggingface.co/models"},
)
config_name: Optional[str] = field(
default=None, metadata={"help": "Pretrained config name or path if not the same as model_name"}
)
tokenizer_name: Optional[str] = field(
default=None, metadata={"help": "Pretrained tokenizer name or path if not the same as model_name"}
)
feature_extractor_name: str = field(default=None, metadata={"help": "Name or path of preprocessor config."})
cache_dir: Optional[str] = field(
default=None, metadata={"help": "Where do you want to store the pretrained models downloaded from s3"}
)
model_revision: str = field(
default="main",
metadata={"help": "The specific model version to use (can be a branch name, tag name or commit id)."},
)
use_fast_tokenizer: bool = field(
default=True,
metadata={"help": "Whether to use one of the fast tokenizer (backed by the tokenizers library) or not."},
)
use_auth_token: bool = field(
default=False,
metadata={
"help": "Will use the token generated when running `transformers-cli login` (necessary to use this script "
"with private models)."
},
)
freeze_vision_model: bool = field(
default=False, metadata={"help": "Whether to freeze the vision model parameters or not."}
)
freeze_text_model: bool = field(
default=False, metadata={"help": "Whether to freeze the text model parameters or not."}
)
@dataclass
class DataTrainingArguments:
"""
Arguments pertaining to what data we are going to input our model for training and eval.
"""
dataset_name: Optional[str] = field(
default=None, metadata={"help": "The name of the dataset to use (via the datasets library)."}
)
dataset_config_name: Optional[str] = field(
default=None, metadata={"help": "The configuration name of the dataset to use (via the datasets library)."}
)
data_dir: Optional[str] = field(default=None, metadata={"help": "The data directory containing input files."})
image_column: Optional[str] = field(
default="image_path",
metadata={"help": "The name of the column in the datasets containing the full image file paths."},
)
caption_column: Optional[str] = field(
default="caption",
metadata={"help": "The name of the column in the datasets containing the image captions."},
)
train_file: Optional[str] = field(
default=None, metadata={"help": "The input training data file (a jsonlines file)."}
)
validation_file: Optional[str] = field(
default=None,
metadata={"help": "An optional input evaluation data file (a jsonlines file)."},
)
max_seq_length: Optional[int] = field(
default=128,
metadata={
"help": "The maximum total input sequence length after tokenization. Sequences longer "
"than this will be truncated, sequences shorter will be padded."
},
)
max_train_samples: Optional[int] = field(
default=None,
metadata={
"help": "For debugging purposes or quicker training, truncate the number of training examples to this "
"value if set."
},
)
max_eval_samples: Optional[int] = field(
default=None,
metadata={
"help": "For debugging purposes or quicker training, truncate the number of evaluation examples to this "
"value if set."
},
)
overwrite_cache: bool = field(
default=False, metadata={"help": "Overwrite the cached training and evaluation sets"}
)
overwrite_cache: bool = field(
default=False, metadata={"help": "Overwrite the cached training and evaluation sets"}
)
preprocessing_num_workers: Optional[int] = field(
default=None,
metadata={"help": "The number of processes to use for the preprocessing."},
)
def __post_init__(self):
if self.dataset_name is None and self.train_file is None and self.validation_file is None:
raise ValueError("Need either a dataset name or a training/validation file.")
else:
if self.train_file is not None:
extension = self.train_file.split(".")[-1]
assert extension in ["csv", "json"], "`train_file` should be a csv or a json file."
if self.validation_file is not None:
extension = self.validation_file.split(".")[-1]
assert extension in ["csv", "json"], "`validation_file` should be a csv or a json file."
if self.validation_file is not None:
extension = self.validation_file.split(".")[-1]
assert extension == "json", "`validation_file` should be a json file."
dataset_name_mapping = {
"image_caption_dataset.py": ("image_path", "caption"),
}
# We use torchvision for faster image pre-processing. The transforms are implemented as nn.Module,
# so we jit it to be faster.
class Transform(torch.nn.Module):
def __init__(self, image_size, mean, std):
super().__init__()
self.transforms = torch.nn.Sequential(
Resize([image_size], interpolation=InterpolationMode.BICUBIC),
CenterCrop(image_size),
ConvertImageDtype(torch.float),
Normalize(mean, std),
)
def forward(self, x: Image) -> torch.Tensor:
with torch.no_grad():
x = self.transforms(x)
return x
def collate_fn(examples):
pixel_values = torch.stack([example["pixel_values"] for example in examples])
input_ids = torch.tensor([example["input_ids"] for example in examples], dtype=torch.long)
attention_mask = torch.tensor([example["attention_mask"] for example in examples], dtype=torch.long)
return {
"pixel_values": pixel_values,
"input_ids": input_ids,
"attention_mask": attention_mask,
"return_loss": True,
}
def main():
# 1. Parse input arguments
# See all possible arguments in src/transformers/training_args.py
# or by passing the --help flag to this script.
# We now keep distinct sets of args, for a cleaner separation of concerns.
parser = HfArgumentParser((ModelArguments, DataTrainingArguments, TrainingArguments))
if len(sys.argv) == 2 and sys.argv[1].endswith(".json"):
# If we pass only one argument to the script and it's the path to a json file,
# let's parse it to get our arguments.
model_args, data_args, training_args = parser.parse_json_file(json_file=os.path.abspath(sys.argv[1]))
else:
model_args, data_args, training_args = parser.parse_args_into_dataclasses()
# 2. Setup logging
logging.basicConfig(
format="%(asctime)s - %(levelname)s - %(name)s - %(message)s",
datefmt="%m/%d/%Y %H:%M:%S",
handlers=[logging.StreamHandler(sys.stdout)],
)
log_level = training_args.get_process_log_level()
logger.setLevel(log_level)
transformers.utils.logging.set_verbosity(log_level)
transformers.utils.logging.enable_default_handler()
transformers.utils.logging.enable_explicit_format()
# Log on each process the small summary:
logger.warning(
f"Process rank: {training_args.local_rank}, device: {training_args.device}, n_gpu: {training_args.n_gpu}"
+ f"distributed training: {bool(training_args.local_rank != -1)}, 16-bits training: {training_args.fp16}"
)
logger.info(f"Training/evaluation parameters {training_args}")
# 3. Detecting last checkpoint and eventualy continue from last checkpoint
last_checkpoint = None
if os.path.isdir(training_args.output_dir) and training_args.do_train and not training_args.overwrite_output_dir:
last_checkpoint = get_last_checkpoint(training_args.output_dir)
if last_checkpoint is None and len(os.listdir(training_args.output_dir)) > 0:
raise ValueError(
f"Output directory ({training_args.output_dir}) already exists and is not empty. "
"Use --overwrite_output_dir to overcome."
)
elif last_checkpoint is not None and training_args.resume_from_checkpoint is None:
logger.info(
f"Checkpoint detected, resuming training at {last_checkpoint}. To avoid this behavior, change "
"the `--output_dir` or add `--overwrite_output_dir` to train from scratch."
)
# 4. Load dataset
# Get the datasets: you can either provide your own CSV/JSON training and evaluation files (see below)
# or just provide the name of one of the public datasets available on the hub at https://huggingface.co/datasets/
# (the dataset will be downloaded automatically from the datasets Hub).
#
# For CSV/JSON files this script will use the first column for the full image path and the second column for the
# captions (unless you specify column names for this with the `image_column` and `caption_column` arguments).
#
if data_args.dataset_name is not None:
# Downloading and loading a dataset from the hub.
dataset = load_dataset(
data_args.dataset_name,
data_args.dataset_config_name,
cache_dir=model_args.cache_dir,
keep_in_memory=False,
data_dir=data_args.data_dir,
)
else:
data_files = {}
if data_args.train_file is not None:
data_files["train"] = data_args.train_file
extension = data_args.train_file.split(".")[-1]
if data_args.validation_file is not None:
data_files["validation"] = data_args.validation_file
extension = data_args.validation_file.split(".")[-1]
if data_args.test_file is not None:
data_files["test"] = data_args.test_file
extension = data_args.test_file.split(".")[-1]
dataset = load_dataset(extension, data_files=data_files, cache_dir=model_args.cache_dir)
# See more about loading any type of standard or custom dataset (from files, python dict, pandas DataFrame, etc) at
# https://huggingface.co/docs/datasets/loading_datasets.html.
# 5. Load pretrained model, tokenizer, and feature extractor
if model_args.tokenizer_name:
tokenizer = AutoTokenizer.from_pretrained(
model_args.tokenizer_name, cache_dir=model_args.cache_dir, use_fast=model_args.use_fast_tokenizer
)
elif model_args.model_name_or_path:
tokenizer = AutoTokenizer.from_pretrained(
model_args.model_name_or_path, cache_dir=model_args.cache_dir, use_fast=model_args.use_fast_tokenizer
)
else:
raise ValueError(
"You are instantiating a new tokenizer from scratch. This is not supported by this script."
"You can do it from another script, save it, and load it from here, using --tokenizer_name."
)
# Load feature_extractor, in this script we only use this to get the mean and std for normalization.
feature_extractor = AutoFeatureExtractor.from_pretrained(
model_args.feature_extractor_name or model_args.model_name_or_path,
cache_dir=model_args.cache_dir,
revision=model_args.model_revision,
use_auth_token=True if model_args.use_auth_token else None,
)
model = AutoModel.from_pretrained(
model_args.model_name_or_path,
cache_dir=model_args.cache_dir,
revision=model_args.model_revision,
use_auth_token=True if model_args.use_auth_token else None,
)
config = model.config
def _freeze_params(module):
for param in module.parameters():
param.requires_grad = False
if model_args.freeze_vision_model:
_freeze_params(model.vision_model)
if model_args.freeze_text_model:
_freeze_params(model.text_model)
# set seed for torch dataloaders
set_seed(training_args.seed)
# Preprocessing the datasets.
# We need to tokenize inputs and targets.
if training_args.do_train:
column_names = dataset["train"].column_names
elif training_args.do_eval:
column_names = dataset["validation"].column_names
elif training_args.do_predict:
column_names = dataset["test"].column_names
else:
logger.info("There is nothing to do. Please pass `do_train`, `do_eval` and/or `do_predict`.")
return
# 6. Get the column names for input/target.
dataset_columns = dataset_name_mapping.get(data_args.dataset_name, None)
if data_args.image_column is None:
image_column = dataset_columns[0] if dataset_columns is not None else column_names[0]
else:
image_column = data_args.image_column
if image_column not in column_names:
raise ValueError(
f"--image_column' value '{data_args.image_column}' needs to be one of: {', '.join(column_names)}"
)
if data_args.caption_column is None:
caption_column = dataset_columns[1] if dataset_columns is not None else column_names[1]
else:
caption_column = data_args.caption_column
if caption_column not in column_names:
raise ValueError(
f"--caption_column' value '{data_args.caption_column}' needs to be one of: {', '.join(column_names)}"
)
# 7. Preprocessing the datasets.
# Initialize torchvision transforms and jit it for faster processing.
image_transformations = Transform(
config.vision_config.image_size, feature_extractor.image_mean, feature_extractor.image_std
)
image_transformations = torch.jit.script(image_transformations)
# Preprocessing the datasets.
# We need to tokenize input captions and transform the images.
def tokenize_captions(examples):
captions = [caption for caption in examples[caption_column]]
text_inputs = tokenizer(captions, max_length=data_args.max_seq_length, padding="max_length", truncation=True)
examples["input_ids"] = text_inputs.input_ids
examples["attention_mask"] = text_inputs.attention_mask
return examples
def transform_images(examples):
images = [read_image(image_file, mode=ImageReadMode.RGB) for image_file in examples[image_column]]
examples["pixel_values"] = [image_transformations(image) for image in images]
return examples
def filter_corrupt_images(examples):
"""remove problematic images"""
valid_images = []
for image_file in examples[image_column]:
try:
Image.open(image_file)
valid_images.append(True)
except Exception:
valid_images.append(False)
return valid_images
if training_args.do_train:
if "train" not in dataset:
raise ValueError("--do_train requires a train dataset")
train_dataset = dataset["train"]
if data_args.max_train_samples is not None:
train_dataset = train_dataset.select(range(data_args.max_train_samples))
train_dataset = train_dataset.filter(
filter_corrupt_images, batched=True, num_proc=data_args.preprocessing_num_workers
)
train_dataset = train_dataset.map(
function=tokenize_captions,
batched=True,
remove_columns=[col for col in column_names if col != image_column],
num_proc=data_args.preprocessing_num_workers,
load_from_cache_file=not data_args.overwrite_cache,
desc="Running tokenizer on train dataset",
)
# Transform images on the fly as doing it on the whole dataset takes too much time.
train_dataset.set_transform(transform_images)
if training_args.do_eval:
if "validation" not in dataset:
raise ValueError("--do_eval requires a train validation")
eval_dataset = dataset["validation"]
if data_args.max_eval_samples is not None:
eval_dataset = eval_dataset.select(range(data_args.max_eval_samples))
eval_dataset = eval_dataset.filter(
filter_corrupt_images, batched=True, num_proc=data_args.preprocessing_num_workers
)
eval_dataset = eval_dataset.map(
function=tokenize_captions,
batched=True,
num_proc=data_args.preprocessing_num_workers,
remove_columns=[col for col in column_names if col != image_column],
load_from_cache_file=not data_args.overwrite_cache,
desc="Running tokenizer on validation dataset",
)
# Transform images on the fly as doing it on the whole dataset takes too much time.
eval_dataset.set_transform(transform_images)
if training_args.do_predict:
if "test" not in dataset:
raise ValueError("--do_predict requires a test dataset")
test_dataset = dataset["test"]
if data_args.max_eval_samples is not None:
test_dataset = test_dataset.select(range(data_args.max_eval_samples))
test_dataset = test_dataset.filter(
filter_corrupt_images, batched=True, num_proc=data_args.preprocessing_num_workers
)
test_dataset = test_dataset.map(
function=tokenize_captions,
batched=True,
num_proc=data_args.preprocessing_num_workers,
remove_columns=[col for col in column_names if col != image_column],
load_from_cache_file=not data_args.overwrite_cache,
desc="Running tokenizer on test dataset",
)
# Transform images on the fly as doing it on the whole dataset takes too much time.
test_dataset.set_transform(transform_images)
# 8. Initalize our trainer
trainer = Trainer(
model=model,
args=training_args,
train_dataset=train_dataset if training_args.do_train else None,
eval_dataset=eval_dataset if training_args.do_eval else None,
data_collator=collate_fn,
)
# 9. Training
if training_args.do_train:
checkpoint = None
if training_args.resume_from_checkpoint is not None:
checkpoint = training_args.resume_from_checkpoint
elif last_checkpoint is not None:
checkpoint = last_checkpoint
train_result = trainer.train(resume_from_checkpoint=checkpoint)
trainer.save_model()
trainer.log_metrics("train", train_result.metrics)
trainer.save_metrics("train", train_result.metrics)
trainer.save_state()
# 10. Evaluation
if training_args.do_eval:
metrics = trainer.evaluate()
trainer.log_metrics("eval", metrics)
trainer.save_metrics("eval", metrics)
# 11. Write Training Stats and push to hub.
kwargs = {"finetuned_from": model_args.model_name_or_path, "tasks": "contrastive-image-text-modeling"}
if data_args.dataset_name is not None:
kwargs["dataset_tags"] = data_args.dataset_name
if data_args.dataset_config_name is not None:
kwargs["dataset_args"] = data_args.dataset_config_name
kwargs["dataset"] = f"{data_args.dataset_name} {data_args.dataset_config_name}"
else:
kwargs["dataset"] = data_args.dataset_name
if training_args.push_to_hub:
trainer.push_to_hub(**kwargs)
else:
trainer.create_model_card(**kwargs)
if __name__ == "__main__":
main()
| 21,819 | 41.451362 | 119 | py |
robust-transformers | robust-transformers-main/examples/tensorflow/question-answering/run_qa.py | #!/usr/bin/env python
# coding=utf-8
# Copyright 2020 The HuggingFace Team All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
"""
Fine-tuning the library models for question answering.
"""
# You can also adapt this script on your own question answering task. Pointers for this are left as comments.
import logging
import os
import sys
from dataclasses import dataclass, field
from pathlib import Path
from typing import Optional
import tensorflow as tf
from datasets import load_dataset, load_metric
import transformers
from transformers import (
AutoConfig,
AutoTokenizer,
DataCollatorWithPadding,
DefaultDataCollator,
EvalPrediction,
HfArgumentParser,
PreTrainedTokenizerFast,
TFAutoModelForQuestionAnswering,
TFTrainingArguments,
set_seed,
)
from transformers.file_utils import CONFIG_NAME, TF2_WEIGHTS_NAME
from transformers.utils import check_min_version
from utils_qa import postprocess_qa_predictions
# Will error if the minimal version of Transformers is not installed. Remove at your own risks.
check_min_version("4.18.0.dev0")
logger = logging.getLogger(__name__)
# region Arguments
@dataclass
class ModelArguments:
"""
Arguments pertaining to which model/config/tokenizer we are going to fine-tune from.
"""
model_name_or_path: str = field(
metadata={"help": "Path to pretrained model or model identifier from huggingface.co/models"}
)
config_name: Optional[str] = field(
default=None, metadata={"help": "Pretrained config name or path if not the same as model_name"}
)
tokenizer_name: Optional[str] = field(
default=None, metadata={"help": "Pretrained tokenizer name or path if not the same as model_name"}
)
cache_dir: Optional[str] = field(
default=None,
metadata={"help": "Path to directory to store the pretrained models downloaded from huggingface.co"},
)
model_revision: str = field(
default="main",
metadata={"help": "The specific model version to use (can be a branch name, tag name or commit id)."},
)
use_auth_token: bool = field(
default=False,
metadata={
"help": "Will use the token generated when running `transformers-cli login` (necessary to use this script "
"with private models)."
},
)
@dataclass
class DataTrainingArguments:
"""
Arguments pertaining to what data we are going to input our model for training and eval.
"""
dataset_name: Optional[str] = field(
default=None, metadata={"help": "The name of the dataset to use (via the datasets library)."}
)
dataset_config_name: Optional[str] = field(
default=None, metadata={"help": "The configuration name of the dataset to use (via the datasets library)."}
)
train_file: Optional[str] = field(default=None, metadata={"help": "The input training data file (a text file)."})
validation_file: Optional[str] = field(
default=None,
metadata={"help": "An optional input evaluation data file to evaluate the perplexity on (a text file)."},
)
test_file: Optional[str] = field(
default=None,
metadata={"help": "An optional input test data file to evaluate the perplexity on (a text file)."},
)
overwrite_cache: bool = field(
default=False, metadata={"help": "Overwrite the cached training and evaluation sets"}
)
preprocessing_num_workers: Optional[int] = field(
default=None,
metadata={"help": "The number of processes to use for the preprocessing."},
)
max_seq_length: int = field(
default=384,
metadata={
"help": "The maximum total input sequence length after tokenization. Sequences longer "
"than this will be truncated, sequences shorter will be padded."
},
)
pad_to_max_length: bool = field(
default=False,
metadata={
"help": "Whether to pad all samples to `max_seq_length`. "
"If False, will pad the samples dynamically when batching to the maximum length in the batch (which can "
"be faster on GPU but will be slower on TPU)."
},
)
max_train_samples: Optional[int] = field(
default=None,
metadata={
"help": "For debugging purposes or quicker training, truncate the number of training examples to this "
"value if set."
},
)
max_eval_samples: Optional[int] = field(
default=None,
metadata={
"help": "For debugging purposes or quicker training, truncate the number of evaluation examples to this "
"value if set."
},
)
max_predict_samples: Optional[int] = field(
default=None,
metadata={
"help": "For debugging purposes or quicker training, truncate the number of prediction examples to this "
"value if set."
},
)
version_2_with_negative: bool = field(
default=False, metadata={"help": "If true, some of the examples do not have an answer."}
)
null_score_diff_threshold: float = field(
default=0.0,
metadata={
"help": "The threshold used to select the null answer: if the best answer has a score that is less than "
"the score of the null answer minus this threshold, the null answer is selected for this example. "
"Only useful when `version_2_with_negative=True`."
},
)
doc_stride: int = field(
default=128,
metadata={"help": "When splitting up a long document into chunks, how much stride to take between chunks."},
)
n_best_size: int = field(
default=20,
metadata={"help": "The total number of n-best predictions to generate when looking for an answer."},
)
max_answer_length: int = field(
default=30,
metadata={
"help": "The maximum length of an answer that can be generated. This is needed because the start "
"and end predictions are not conditioned on one another."
},
)
def __post_init__(self):
if (
self.dataset_name is None
and self.train_file is None
and self.validation_file is None
and self.test_file is None
):
raise ValueError("Need either a dataset name or a training/validation file/test_file.")
else:
if self.train_file is not None:
extension = self.train_file.split(".")[-1]
assert extension in ["csv", "json"], "`train_file` should be a csv or a json file."
if self.validation_file is not None:
extension = self.validation_file.split(".")[-1]
assert extension in ["csv", "json"], "`validation_file` should be a csv or a json file."
if self.test_file is not None:
extension = self.test_file.split(".")[-1]
assert extension in ["csv", "json"], "`test_file` should be a csv or a json file."
# endregion
# region Helper classes
class SavePretrainedCallback(tf.keras.callbacks.Callback):
# Hugging Face models have a save_pretrained() method that saves both the weights and the necessary
# metadata to allow them to be loaded as a pretrained model in future. This is a simple Keras callback
# that saves the model with this method after each epoch.
def __init__(self, output_dir, **kwargs):
super().__init__()
self.output_dir = output_dir
def on_epoch_end(self, epoch, logs=None):
self.model.save_pretrained(self.output_dir)
# endregion
def main():
# region Argument parsing
# See all possible arguments in src/transformers/training_args.py
# or by passing the --help flag to this script.
# We now keep distinct sets of args, for a cleaner separation of concerns.
parser = HfArgumentParser((ModelArguments, DataTrainingArguments, TFTrainingArguments))
if len(sys.argv) == 2 and sys.argv[1].endswith(".json"):
# If we pass only one argument to the script and it's the path to a json file,
# let's parse it to get our arguments.
model_args, data_args, training_args = parser.parse_json_file(json_file=os.path.abspath(sys.argv[1]))
else:
model_args, data_args, training_args = parser.parse_args_into_dataclasses()
output_dir = Path(training_args.output_dir)
output_dir.mkdir(parents=True, exist_ok=True)
# endregion
# region Checkpoints
checkpoint = None
if len(os.listdir(training_args.output_dir)) > 0 and not training_args.overwrite_output_dir:
if (output_dir / CONFIG_NAME).is_file() and (output_dir / TF2_WEIGHTS_NAME).is_file():
checkpoint = output_dir
logger.info(
f"Checkpoint detected, resuming training from checkpoint in {training_args.output_dir}. To avoid this"
" behavior, change the `--output_dir` or add `--overwrite_output_dir` to train from scratch."
)
else:
raise ValueError(
f"Output directory ({training_args.output_dir}) already exists and is not empty. "
"Use --overwrite_output_dir to continue regardless."
)
# endregion
# region Logging
logging.basicConfig(
format="%(asctime)s - %(levelname)s - %(name)s - %(message)s",
datefmt="%m/%d/%Y %H:%M:%S",
handlers=[logging.StreamHandler(sys.stdout)],
)
logger.setLevel(logging.INFO if training_args.should_log else logging.WARN)
# Set the verbosity to info of the Transformers logger (on main process only):
if training_args.should_log:
transformers.utils.logging.set_verbosity_info()
transformers.utils.logging.enable_default_handler()
transformers.utils.logging.enable_explicit_format()
logger.info(f"Training/evaluation parameters {training_args}")
# endregion
# Set seed before initializing model.
set_seed(training_args.seed)
# region Load Data
# Get the datasets: you can either provide your own CSV/JSON/TXT training and evaluation files (see below)
# or just provide the name of one of the public datasets available on the hub at https://huggingface.co/datasets/
# (the dataset will be downloaded automatically from the datasets Hub).
#
# For CSV/JSON files, this script will use the column called 'text' or the first column if no column called
# 'text' is found. You can easily tweak this behavior (see below).
#
# In distributed training, the load_dataset function guarantee that only one local process can concurrently
# download the dataset.
if data_args.dataset_name is not None:
# Downloading and loading a dataset from the hub.
datasets = load_dataset(data_args.dataset_name, data_args.dataset_config_name, cache_dir=model_args.cache_dir)
else:
data_files = {}
if data_args.train_file is not None:
data_files["train"] = data_args.train_file
extension = data_args.train_file.split(".")[-1]
if data_args.validation_file is not None:
data_files["validation"] = data_args.validation_file
extension = data_args.validation_file.split(".")[-1]
if data_args.test_file is not None:
data_files["test"] = data_args.test_file
extension = data_args.test_file.split(".")[-1]
datasets = load_dataset(extension, data_files=data_files, field="data", cache_dir=model_args.cache_dir)
# See more about loading any type of standard or custom dataset (from files, python dict, pandas DataFrame, etc) at
# https://huggingface.co/docs/datasets/loading_datasets.html.
# endregion
# region Load pretrained model and tokenizer
#
# Distributed training:
# The .from_pretrained methods guarantee that only one local process can concurrently
# download model & vocab.
config = AutoConfig.from_pretrained(
model_args.config_name if model_args.config_name else model_args.model_name_or_path,
cache_dir=model_args.cache_dir,
revision=model_args.model_revision,
use_auth_token=True if model_args.use_auth_token else None,
)
tokenizer = AutoTokenizer.from_pretrained(
model_args.tokenizer_name if model_args.tokenizer_name else model_args.model_name_or_path,
cache_dir=model_args.cache_dir,
use_fast=True,
revision=model_args.model_revision,
use_auth_token=True if model_args.use_auth_token else None,
)
# endregion
# region Tokenizer check: this script requires a fast tokenizer.
if not isinstance(tokenizer, PreTrainedTokenizerFast):
raise ValueError(
"This example script only works for models that have a fast tokenizer. Checkout the big table of models "
"at https://huggingface.co/transformers/index.html#supported-frameworks to find the model types that meet this "
"requirement"
)
# endregion
# region Preprocessing the datasets
# Preprocessing is slightly different for training and evaluation.
if training_args.do_train:
column_names = datasets["train"].column_names
elif training_args.do_eval:
column_names = datasets["validation"].column_names
else:
column_names = datasets["test"].column_names
question_column_name = "question" if "question" in column_names else column_names[0]
context_column_name = "context" if "context" in column_names else column_names[1]
answer_column_name = "answers" if "answers" in column_names else column_names[2]
# Padding side determines if we do (question|context) or (context|question).
pad_on_right = tokenizer.padding_side == "right"
if data_args.max_seq_length > tokenizer.model_max_length:
logger.warning(
f"The max_seq_length passed ({data_args.max_seq_length}) is larger than the maximum length for the"
f"model ({tokenizer.model_max_length}). Using max_seq_length={tokenizer.model_max_length}."
)
max_seq_length = min(data_args.max_seq_length, tokenizer.model_max_length)
if data_args.pad_to_max_length or isinstance(training_args.strategy, tf.distribute.TPUStrategy):
logger.info("Padding all batches to max length because argument was set or we're on TPU.")
padding = "max_length"
else:
padding = False
# Training preprocessing
def prepare_train_features(examples):
# Some of the questions have lots of whitespace on the left, which is not useful and will make the
# truncation of the context fail (the tokenized question will take a lots of space). So we remove that
# left whitespace
examples[question_column_name] = [q.lstrip() for q in examples[question_column_name]]
# Tokenize our examples with truncation and maybe padding, but keep the overflows using a stride. This results
# in one example possible giving several features when a context is long, each of those features having a
# context that overlaps a bit the context of the previous feature.
tokenized_examples = tokenizer(
examples[question_column_name if pad_on_right else context_column_name],
examples[context_column_name if pad_on_right else question_column_name],
truncation="only_second" if pad_on_right else "only_first",
max_length=max_seq_length,
stride=data_args.doc_stride,
return_overflowing_tokens=True,
return_offsets_mapping=True,
padding=padding,
)
# Since one example might give us several features if it has a long context, we need a map from a feature to
# its corresponding example. This key gives us just that.
sample_mapping = tokenized_examples.pop("overflow_to_sample_mapping")
# The offset mappings will give us a map from token to character position in the original context. This will
# help us compute the start_positions and end_positions.
offset_mapping = tokenized_examples.pop("offset_mapping")
# Let's label those examples!
tokenized_examples["start_positions"] = []
tokenized_examples["end_positions"] = []
for i, offsets in enumerate(offset_mapping):
# We will label impossible answers with the index of the CLS token.
input_ids = tokenized_examples["input_ids"][i]
cls_index = input_ids.index(tokenizer.cls_token_id)
# Grab the sequence corresponding to that example (to know what is the context and what is the question).
sequence_ids = tokenized_examples.sequence_ids(i)
# One example can give several spans, this is the index of the example containing this span of text.
sample_index = sample_mapping[i]
answers = examples[answer_column_name][sample_index]
# If no answers are given, set the cls_index as answer.
if len(answers["answer_start"]) == 0:
tokenized_examples["start_positions"].append(cls_index)
tokenized_examples["end_positions"].append(cls_index)
else:
# Start/end character index of the answer in the text.
start_char = answers["answer_start"][0]
end_char = start_char + len(answers["text"][0])
# Start token index of the current span in the text.
token_start_index = 0
while sequence_ids[token_start_index] != (1 if pad_on_right else 0):
token_start_index += 1
# End token index of the current span in the text.
token_end_index = len(input_ids) - 1
while sequence_ids[token_end_index] != (1 if pad_on_right else 0):
token_end_index -= 1
# Detect if the answer is out of the span (in which case this feature is labeled with the CLS index).
if not (offsets[token_start_index][0] <= start_char and offsets[token_end_index][1] >= end_char):
tokenized_examples["start_positions"].append(cls_index)
tokenized_examples["end_positions"].append(cls_index)
else:
# Otherwise move the token_start_index and token_end_index to the two ends of the answer.
# Note: we could go after the last offset if the answer is the last word (edge case).
while token_start_index < len(offsets) and offsets[token_start_index][0] <= start_char:
token_start_index += 1
tokenized_examples["start_positions"].append(token_start_index - 1)
while offsets[token_end_index][1] >= end_char:
token_end_index -= 1
tokenized_examples["end_positions"].append(token_end_index + 1)
return tokenized_examples
processed_datasets = dict()
if training_args.do_train:
if "train" not in datasets:
raise ValueError("--do_train requires a train dataset")
train_dataset = datasets["train"]
if data_args.max_train_samples is not None:
# We will select sample from whole data if agument is specified
train_dataset = train_dataset.select(range(data_args.max_train_samples))
# Create train feature from dataset
train_dataset = train_dataset.map(
prepare_train_features,
batched=True,
num_proc=data_args.preprocessing_num_workers,
remove_columns=column_names,
load_from_cache_file=not data_args.overwrite_cache,
)
if data_args.max_train_samples is not None:
# Number of samples might increase during Feature Creation, We select only specified max samples
train_dataset = train_dataset.select(range(data_args.max_train_samples))
processed_datasets["train"] = train_dataset
# Validation preprocessing
def prepare_validation_features(examples):
# Some of the questions have lots of whitespace on the left, which is not useful and will make the
# truncation of the context fail (the tokenized question will take a lots of space). So we remove that
# left whitespace
examples[question_column_name] = [q.lstrip() for q in examples[question_column_name]]
# Tokenize our examples with truncation and maybe padding, but keep the overflows using a stride. This results
# in one example possible giving several features when a context is long, each of those features having a
# context that overlaps a bit the context of the previous feature.
tokenized_examples = tokenizer(
examples[question_column_name if pad_on_right else context_column_name],
examples[context_column_name if pad_on_right else question_column_name],
truncation="only_second" if pad_on_right else "only_first",
max_length=max_seq_length,
stride=data_args.doc_stride,
return_overflowing_tokens=True,
return_offsets_mapping=True,
padding=padding,
)
# Since one example might give us several features if it has a long context, we need a map from a feature to
# its corresponding example. This key gives us just that.
sample_mapping = tokenized_examples.pop("overflow_to_sample_mapping")
# For evaluation, we will need to convert our predictions to substrings of the context, so we keep the
# corresponding example_id and we will store the offset mappings.
tokenized_examples["example_id"] = []
for i in range(len(tokenized_examples["input_ids"])):
# Grab the sequence corresponding to that example (to know what is the context and what is the question).
sequence_ids = tokenized_examples.sequence_ids(i)
context_index = 1 if pad_on_right else 0
# One example can give several spans, this is the index of the example containing this span of text.
sample_index = sample_mapping[i]
tokenized_examples["example_id"].append(examples["id"][sample_index])
# Set to None the offset_mapping that are not part of the context so it's easy to determine if a token
# position is part of the context or not.
tokenized_examples["offset_mapping"][i] = [
(o if sequence_ids[k] == context_index else None)
for k, o in enumerate(tokenized_examples["offset_mapping"][i])
]
return tokenized_examples
if training_args.do_eval:
if "validation" not in datasets:
raise ValueError("--do_eval requires a validation dataset")
eval_examples = datasets["validation"]
if data_args.max_eval_samples is not None:
# We will select sample from whole data
eval_examples = eval_examples.select(range(data_args.max_eval_samples))
# Validation Feature Creation
eval_dataset = eval_examples.map(
prepare_validation_features,
batched=True,
num_proc=data_args.preprocessing_num_workers,
remove_columns=column_names,
load_from_cache_file=not data_args.overwrite_cache,
)
if data_args.max_eval_samples is not None:
# During Feature creation dataset samples might increase, we will select required samples again
eval_dataset = eval_dataset.select(range(data_args.max_eval_samples))
processed_datasets["validation"] = eval_dataset
if training_args.do_predict:
if "test" not in datasets:
raise ValueError("--do_predict requires a test dataset")
predict_examples = datasets["test"]
if data_args.max_predict_samples is not None:
# We will select sample from whole data
predict_examples = predict_examples.select(range(data_args.max_predict_samples))
# Predict Feature Creation
predict_dataset = predict_examples.map(
prepare_validation_features,
batched=True,
num_proc=data_args.preprocessing_num_workers,
remove_columns=column_names,
load_from_cache_file=not data_args.overwrite_cache,
)
if data_args.max_predict_samples is not None:
# During Feature creation dataset samples might increase, we will select required samples again
predict_dataset = predict_dataset.select(range(data_args.max_predict_samples))
processed_datasets["test"] = predict_dataset
# endregion
# region Metrics and Post-processing:
def post_processing_function(examples, features, predictions, stage="eval"):
# Post-processing: we match the start logits and end logits to answers in the original context.
predictions = postprocess_qa_predictions(
examples=examples,
features=features,
predictions=predictions,
version_2_with_negative=data_args.version_2_with_negative,
n_best_size=data_args.n_best_size,
max_answer_length=data_args.max_answer_length,
null_score_diff_threshold=data_args.null_score_diff_threshold,
output_dir=training_args.output_dir,
prefix=stage,
)
# Format the result to the format the metric expects.
if data_args.version_2_with_negative:
formatted_predictions = [
{"id": k, "prediction_text": v, "no_answer_probability": 0.0} for k, v in predictions.items()
]
else:
formatted_predictions = [{"id": k, "prediction_text": v} for k, v in predictions.items()]
references = [{"id": ex["id"], "answers": ex[answer_column_name]} for ex in examples]
return EvalPrediction(predictions=formatted_predictions, label_ids=references)
metric = load_metric("squad_v2" if data_args.version_2_with_negative else "squad")
def compute_metrics(p: EvalPrediction):
return metric.compute(predictions=p.predictions, references=p.label_ids)
# endregion
with training_args.strategy.scope():
# region Load model
if checkpoint is None:
model_path = model_args.model_name_or_path
else:
model_path = checkpoint
model = TFAutoModelForQuestionAnswering.from_pretrained(
model_path,
config=config,
cache_dir=model_args.cache_dir,
revision=model_args.model_revision,
use_auth_token=True if model_args.use_auth_token else None,
)
optimizer = tf.keras.optimizers.Adam(
learning_rate=training_args.learning_rate,
beta_1=training_args.adam_beta1,
beta_2=training_args.adam_beta2,
epsilon=training_args.adam_epsilon,
clipnorm=training_args.max_grad_norm,
)
# no user-specified loss = will use the model internal loss
model.compile(optimizer=optimizer)
# endregion
# region Training
if padding:
data_collator = DefaultDataCollator(return_tensors="tf")
else:
data_collator = DataCollatorWithPadding(tokenizer, return_tensors="tf")
tensor_keys = ["attention_mask", "input_ids"]
label_keys = ["start_positions", "end_positions"]
if training_args.do_train:
# Make a tf.data.Dataset for this
training_dataset = processed_datasets["train"].to_tf_dataset(
# labels are passed as input, as we will use the model's internal loss
columns=tensor_keys + label_keys,
shuffle=True,
batch_size=training_args.per_device_train_batch_size,
collate_fn=data_collator,
drop_remainder=True,
)
model.fit(training_dataset, epochs=int(training_args.num_train_epochs))
# endregion
# region Evaluation
if training_args.do_eval:
logger.info("*** Evaluation ***")
eval_inputs = {
"input_ids": tf.ragged.constant(processed_datasets["validation"]["input_ids"]).to_tensor(),
"attention_mask": tf.ragged.constant(processed_datasets["validation"]["attention_mask"]).to_tensor(),
}
eval_predictions = model.predict(eval_inputs)
post_processed_eval = post_processing_function(
datasets["validation"],
processed_datasets["validation"],
(eval_predictions.start_logits, eval_predictions.end_logits),
)
metrics = compute_metrics(post_processed_eval)
logging.info("Evaluation metrics:")
for metric, value in metrics.items():
logging.info(f"{metric}: {value:.3f}")
# endregion
# region Prediction
if training_args.do_predict:
logger.info("*** Predict ***")
predict_inputs = {
"input_ids": tf.ragged.constant(processed_datasets["test"]["input_ids"]).to_tensor(),
"attention_mask": tf.ragged.constant(processed_datasets["test"]["attention_mask"]).to_tensor(),
}
test_predictions = model.predict(predict_inputs)
post_processed_test = post_processing_function(
datasets["test"],
processed_datasets["test"],
(test_predictions.start_logits, test_predictions.end_logits),
)
metrics = compute_metrics(post_processed_test)
logging.info("Test metrics:")
for metric, value in metrics.items():
logging.info(f"{metric}: {value:.3f}")
# endregion
if training_args.push_to_hub:
model.push_to_hub()
if __name__ == "__main__":
main()
| 30,503 | 44.664671 | 124 | py |
robust-transformers | robust-transformers-main/examples/tensorflow/question-answering/utils_qa.py | # coding=utf-8
# Copyright 2020 The HuggingFace Team All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
"""
Post-processing utilities for question answering.
"""
import collections
import json
import logging
import os
from typing import Optional, Tuple
import numpy as np
from tqdm.auto import tqdm
logger = logging.getLogger(__name__)
def postprocess_qa_predictions(
examples,
features,
predictions: Tuple[np.ndarray, np.ndarray],
version_2_with_negative: bool = False,
n_best_size: int = 20,
max_answer_length: int = 30,
null_score_diff_threshold: float = 0.0,
output_dir: Optional[str] = None,
prefix: Optional[str] = None,
log_level: Optional[int] = logging.WARNING,
):
"""
Post-processes the predictions of a question-answering model to convert them to answers that are substrings of the
original contexts. This is the base postprocessing functions for models that only return start and end logits.
Args:
examples: The non-preprocessed dataset (see the main script for more information).
features: The processed dataset (see the main script for more information).
predictions (:obj:`Tuple[np.ndarray, np.ndarray]`):
The predictions of the model: two arrays containing the start logits and the end logits respectively. Its
first dimension must match the number of elements of :obj:`features`.
version_2_with_negative (:obj:`bool`, `optional`, defaults to :obj:`False`):
Whether or not the underlying dataset contains examples with no answers.
n_best_size (:obj:`int`, `optional`, defaults to 20):
The total number of n-best predictions to generate when looking for an answer.
max_answer_length (:obj:`int`, `optional`, defaults to 30):
The maximum length of an answer that can be generated. This is needed because the start and end predictions
are not conditioned on one another.
null_score_diff_threshold (:obj:`float`, `optional`, defaults to 0):
The threshold used to select the null answer: if the best answer has a score that is less than the score of
the null answer minus this threshold, the null answer is selected for this example (note that the score of
the null answer for an example giving several features is the minimum of the scores for the null answer on
each feature: all features must be aligned on the fact they `want` to predict a null answer).
Only useful when :obj:`version_2_with_negative` is :obj:`True`.
output_dir (:obj:`str`, `optional`):
If provided, the dictionaries of predictions, n_best predictions (with their scores and logits) and, if
:obj:`version_2_with_negative=True`, the dictionary of the scores differences between best and null
answers, are saved in `output_dir`.
prefix (:obj:`str`, `optional`):
If provided, the dictionaries mentioned above are saved with `prefix` added to their names.
log_level (:obj:`int`, `optional`, defaults to ``logging.WARNING``):
``logging`` log level (e.g., ``logging.WARNING``)
"""
if len(predictions) != 2:
raise ValueError("`predictions` should be a tuple with two elements (start_logits, end_logits).")
all_start_logits, all_end_logits = predictions
if len(predictions[0]) != len(features):
raise ValueError(f"Got {len(predictions[0])} predictions and {len(features)} features.")
# Build a map example to its corresponding features.
example_id_to_index = {k: i for i, k in enumerate(examples["id"])}
features_per_example = collections.defaultdict(list)
for i, feature in enumerate(features):
features_per_example[example_id_to_index[feature["example_id"]]].append(i)
# The dictionaries we have to fill.
all_predictions = collections.OrderedDict()
all_nbest_json = collections.OrderedDict()
if version_2_with_negative:
scores_diff_json = collections.OrderedDict()
# Logging.
logger.setLevel(log_level)
logger.info(f"Post-processing {len(examples)} example predictions split into {len(features)} features.")
# Let's loop over all the examples!
for example_index, example in enumerate(tqdm(examples)):
# Those are the indices of the features associated to the current example.
feature_indices = features_per_example[example_index]
min_null_prediction = None
prelim_predictions = []
# Looping through all the features associated to the current example.
for feature_index in feature_indices:
# We grab the predictions of the model for this feature.
start_logits = all_start_logits[feature_index]
end_logits = all_end_logits[feature_index]
# This is what will allow us to map some the positions in our logits to span of texts in the original
# context.
offset_mapping = features[feature_index]["offset_mapping"]
# Optional `token_is_max_context`, if provided we will remove answers that do not have the maximum context
# available in the current feature.
token_is_max_context = features[feature_index].get("token_is_max_context", None)
# Update minimum null prediction.
feature_null_score = start_logits[0] + end_logits[0]
if min_null_prediction is None or min_null_prediction["score"] > feature_null_score:
min_null_prediction = {
"offsets": (0, 0),
"score": feature_null_score,
"start_logit": start_logits[0],
"end_logit": end_logits[0],
}
# Go through all possibilities for the `n_best_size` greater start and end logits.
start_indexes = np.argsort(start_logits)[-1 : -n_best_size - 1 : -1].tolist()
end_indexes = np.argsort(end_logits)[-1 : -n_best_size - 1 : -1].tolist()
for start_index in start_indexes:
for end_index in end_indexes:
# Don't consider out-of-scope answers, either because the indices are out of bounds or correspond
# to part of the input_ids that are not in the context.
if (
start_index >= len(offset_mapping)
or end_index >= len(offset_mapping)
or offset_mapping[start_index] is None
or len(offset_mapping[start_index]) < 2
or offset_mapping[end_index] is None
or len(offset_mapping[end_index]) < 2
):
continue
# Don't consider answers with a length that is either < 0 or > max_answer_length.
if end_index < start_index or end_index - start_index + 1 > max_answer_length:
continue
# Don't consider answer that don't have the maximum context available (if such information is
# provided).
if token_is_max_context is not None and not token_is_max_context.get(str(start_index), False):
continue
prelim_predictions.append(
{
"offsets": (offset_mapping[start_index][0], offset_mapping[end_index][1]),
"score": start_logits[start_index] + end_logits[end_index],
"start_logit": start_logits[start_index],
"end_logit": end_logits[end_index],
}
)
if version_2_with_negative:
# Add the minimum null prediction
prelim_predictions.append(min_null_prediction)
null_score = min_null_prediction["score"]
# Only keep the best `n_best_size` predictions.
predictions = sorted(prelim_predictions, key=lambda x: x["score"], reverse=True)[:n_best_size]
# Add back the minimum null prediction if it was removed because of its low score.
if version_2_with_negative and not any(p["offsets"] == (0, 0) for p in predictions):
predictions.append(min_null_prediction)
# Use the offsets to gather the answer text in the original context.
context = example["context"]
for pred in predictions:
offsets = pred.pop("offsets")
pred["text"] = context[offsets[0] : offsets[1]]
# In the very rare edge case we have not a single non-null prediction, we create a fake prediction to avoid
# failure.
if len(predictions) == 0 or (len(predictions) == 1 and predictions[0]["text"] == ""):
predictions.insert(0, {"text": "empty", "start_logit": 0.0, "end_logit": 0.0, "score": 0.0})
# Compute the softmax of all scores (we do it with numpy to stay independent from torch/tf in this file, using
# the LogSumExp trick).
scores = np.array([pred.pop("score") for pred in predictions])
exp_scores = np.exp(scores - np.max(scores))
probs = exp_scores / exp_scores.sum()
# Include the probabilities in our predictions.
for prob, pred in zip(probs, predictions):
pred["probability"] = prob
# Pick the best prediction. If the null answer is not possible, this is easy.
if not version_2_with_negative:
all_predictions[example["id"]] = predictions[0]["text"]
else:
# Otherwise we first need to find the best non-empty prediction.
i = 0
while predictions[i]["text"] == "":
i += 1
best_non_null_pred = predictions[i]
# Then we compare to the null prediction using the threshold.
score_diff = null_score - best_non_null_pred["start_logit"] - best_non_null_pred["end_logit"]
scores_diff_json[example["id"]] = float(score_diff) # To be JSON-serializable.
if score_diff > null_score_diff_threshold:
all_predictions[example["id"]] = ""
else:
all_predictions[example["id"]] = best_non_null_pred["text"]
# Make `predictions` JSON-serializable by casting np.float back to float.
all_nbest_json[example["id"]] = [
{k: (float(v) if isinstance(v, (np.float16, np.float32, np.float64)) else v) for k, v in pred.items()}
for pred in predictions
]
# If we have an output_dir, let's save all those dicts.
if output_dir is not None:
if not os.path.isdir(output_dir):
raise EnvironmentError(f"{output_dir} is not a directory.")
prediction_file = os.path.join(
output_dir, "predictions.json" if prefix is None else f"{prefix}_predictions.json"
)
nbest_file = os.path.join(
output_dir, "nbest_predictions.json" if prefix is None else f"{prefix}_nbest_predictions.json"
)
if version_2_with_negative:
null_odds_file = os.path.join(
output_dir, "null_odds.json" if prefix is None else f"{prefix}_null_odds.json"
)
logger.info(f"Saving predictions to {prediction_file}.")
with open(prediction_file, "w") as writer:
writer.write(json.dumps(all_predictions, indent=4) + "\n")
logger.info(f"Saving nbest_preds to {nbest_file}.")
with open(nbest_file, "w") as writer:
writer.write(json.dumps(all_nbest_json, indent=4) + "\n")
if version_2_with_negative:
logger.info(f"Saving null_odds to {null_odds_file}.")
with open(null_odds_file, "w") as writer:
writer.write(json.dumps(scores_diff_json, indent=4) + "\n")
return all_predictions
def postprocess_qa_predictions_with_beam_search(
examples,
features,
predictions: Tuple[np.ndarray, np.ndarray],
version_2_with_negative: bool = False,
n_best_size: int = 20,
max_answer_length: int = 30,
start_n_top: int = 5,
end_n_top: int = 5,
output_dir: Optional[str] = None,
prefix: Optional[str] = None,
log_level: Optional[int] = logging.WARNING,
):
"""
Post-processes the predictions of a question-answering model with beam search to convert them to answers that are substrings of the
original contexts. This is the postprocessing functions for models that return start and end logits, indices, as well as
cls token predictions.
Args:
examples: The non-preprocessed dataset (see the main script for more information).
features: The processed dataset (see the main script for more information).
predictions (:obj:`Tuple[np.ndarray, np.ndarray]`):
The predictions of the model: two arrays containing the start logits and the end logits respectively. Its
first dimension must match the number of elements of :obj:`features`.
version_2_with_negative (:obj:`bool`, `optional`, defaults to :obj:`False`):
Whether or not the underlying dataset contains examples with no answers.
n_best_size (:obj:`int`, `optional`, defaults to 20):
The total number of n-best predictions to generate when looking for an answer.
max_answer_length (:obj:`int`, `optional`, defaults to 30):
The maximum length of an answer that can be generated. This is needed because the start and end predictions
are not conditioned on one another.
start_n_top (:obj:`int`, `optional`, defaults to 5):
The number of top start logits too keep when searching for the :obj:`n_best_size` predictions.
end_n_top (:obj:`int`, `optional`, defaults to 5):
The number of top end logits too keep when searching for the :obj:`n_best_size` predictions.
output_dir (:obj:`str`, `optional`):
If provided, the dictionaries of predictions, n_best predictions (with their scores and logits) and, if
:obj:`version_2_with_negative=True`, the dictionary of the scores differences between best and null
answers, are saved in `output_dir`.
prefix (:obj:`str`, `optional`):
If provided, the dictionaries mentioned above are saved with `prefix` added to their names.
log_level (:obj:`int`, `optional`, defaults to ``logging.WARNING``):
``logging`` log level (e.g., ``logging.WARNING``)
"""
if len(predictions) != 5:
raise ValueError("`predictions` should be a tuple with five elements.")
start_top_log_probs, start_top_index, end_top_log_probs, end_top_index, cls_logits = predictions
if len(predictions[0]) != len(features):
raise ValueError(f"Got {len(predictions[0])} predictions and {len(features)} features.")
# Build a map example to its corresponding features.
example_id_to_index = {k: i for i, k in enumerate(examples["id"])}
features_per_example = collections.defaultdict(list)
for i, feature in enumerate(features):
features_per_example[example_id_to_index[feature["example_id"]]].append(i)
# The dictionaries we have to fill.
all_predictions = collections.OrderedDict()
all_nbest_json = collections.OrderedDict()
scores_diff_json = collections.OrderedDict() if version_2_with_negative else None
# Logging.
logger.setLevel(log_level)
logger.info(f"Post-processing {len(examples)} example predictions split into {len(features)} features.")
# Let's loop over all the examples!
for example_index, example in enumerate(tqdm(examples)):
# Those are the indices of the features associated to the current example.
feature_indices = features_per_example[example_index]
min_null_score = None
prelim_predictions = []
# Looping through all the features associated to the current example.
for feature_index in feature_indices:
# We grab the predictions of the model for this feature.
start_log_prob = start_top_log_probs[feature_index]
start_indexes = start_top_index[feature_index]
end_log_prob = end_top_log_probs[feature_index]
end_indexes = end_top_index[feature_index]
feature_null_score = cls_logits[feature_index]
# This is what will allow us to map some the positions in our logits to span of texts in the original
# context.
offset_mapping = features[feature_index]["offset_mapping"]
# Optional `token_is_max_context`, if provided we will remove answers that do not have the maximum context
# available in the current feature.
token_is_max_context = features[feature_index].get("token_is_max_context", None)
# Update minimum null prediction
if min_null_score is None or feature_null_score < min_null_score:
min_null_score = feature_null_score
# Go through all possibilities for the `n_start_top`/`n_end_top` greater start and end logits.
for i in range(start_n_top):
for j in range(end_n_top):
start_index = int(start_indexes[i])
j_index = i * end_n_top + j
end_index = int(end_indexes[j_index])
# Don't consider out-of-scope answers (last part of the test should be unnecessary because of the
# p_mask but let's not take any risk)
if (
start_index >= len(offset_mapping)
or end_index >= len(offset_mapping)
or offset_mapping[start_index] is None
or offset_mapping[end_index] is None
):
continue
# Don't consider answers with a length negative or > max_answer_length.
if end_index < start_index or end_index - start_index + 1 > max_answer_length:
continue
# Don't consider answer that don't have the maximum context available (if such information is
# provided).
if token_is_max_context is not None and not token_is_max_context.get(str(start_index), False):
continue
prelim_predictions.append(
{
"offsets": (offset_mapping[start_index][0], offset_mapping[end_index][1]),
"score": start_log_prob[i] + end_log_prob[j_index],
"start_log_prob": start_log_prob[i],
"end_log_prob": end_log_prob[j_index],
}
)
# Only keep the best `n_best_size` predictions.
predictions = sorted(prelim_predictions, key=lambda x: x["score"], reverse=True)[:n_best_size]
# Use the offsets to gather the answer text in the original context.
context = example["context"]
for pred in predictions:
offsets = pred.pop("offsets")
pred["text"] = context[offsets[0] : offsets[1]]
# In the very rare edge case we have not a single non-null prediction, we create a fake prediction to avoid
# failure.
if len(predictions) == 0:
predictions.insert(0, {"text": "", "start_logit": -1e-6, "end_logit": -1e-6, "score": -2e-6})
# Compute the softmax of all scores (we do it with numpy to stay independent from torch/tf in this file, using
# the LogSumExp trick).
scores = np.array([pred.pop("score") for pred in predictions])
exp_scores = np.exp(scores - np.max(scores))
probs = exp_scores / exp_scores.sum()
# Include the probabilities in our predictions.
for prob, pred in zip(probs, predictions):
pred["probability"] = prob
# Pick the best prediction and set the probability for the null answer.
all_predictions[example["id"]] = predictions[0]["text"]
if version_2_with_negative:
scores_diff_json[example["id"]] = float(min_null_score)
# Make `predictions` JSON-serializable by casting np.float back to float.
all_nbest_json[example["id"]] = [
{k: (float(v) if isinstance(v, (np.float16, np.float32, np.float64)) else v) for k, v in pred.items()}
for pred in predictions
]
# If we have an output_dir, let's save all those dicts.
if output_dir is not None:
if not os.path.isdir(output_dir):
raise EnvironmentError(f"{output_dir} is not a directory.")
prediction_file = os.path.join(
output_dir, "predictions.json" if prefix is None else f"{prefix}_predictions.json"
)
nbest_file = os.path.join(
output_dir, "nbest_predictions.json" if prefix is None else f"{prefix}_nbest_predictions.json"
)
if version_2_with_negative:
null_odds_file = os.path.join(
output_dir, "null_odds.json" if prefix is None else f"{prefix}_null_odds.json"
)
logger.info(f"Saving predictions to {prediction_file}.")
with open(prediction_file, "w") as writer:
writer.write(json.dumps(all_predictions, indent=4) + "\n")
logger.info(f"Saving nbest_preds to {nbest_file}.")
with open(nbest_file, "w") as writer:
writer.write(json.dumps(all_nbest_json, indent=4) + "\n")
if version_2_with_negative:
logger.info(f"Saving null_odds to {null_odds_file}.")
with open(null_odds_file, "w") as writer:
writer.write(json.dumps(scores_diff_json, indent=4) + "\n")
return all_predictions, scores_diff_json
| 22,378 | 50.445977 | 135 | py |
robust-transformers | robust-transformers-main/examples/tensorflow/token-classification/run_ner.py | #!/usr/bin/env python
# coding=utf-8
# Copyright 2021 The HuggingFace Inc. team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
"""
Fine-tuning a 🤗 Transformers model on token classification tasks (NER, POS, CHUNKS) relying on the accelerate library
without using a Trainer.
"""
import logging
import random
from dataclasses import dataclass, field
from functools import partial
from typing import Optional
import datasets
import numpy as np
import tensorflow as tf
from datasets import ClassLabel, load_dataset, load_metric
import transformers
from transformers import (
CONFIG_MAPPING,
MODEL_MAPPING,
AutoConfig,
AutoTokenizer,
HfArgumentParser,
TFAutoModelForTokenClassification,
TFTrainingArguments,
create_optimizer,
set_seed,
)
from transformers.utils.versions import require_version
logger = logging.getLogger(__name__)
logger.addHandler(logging.StreamHandler())
require_version("datasets>=1.8.0", "To fix: pip install -r examples/pytorch/token-classification/requirements.txt")
# You should update this to your particular problem to have better documentation of `model_type`
MODEL_CONFIG_CLASSES = list(MODEL_MAPPING.keys())
MODEL_TYPES = tuple(conf.model_type for conf in MODEL_CONFIG_CLASSES)
# region Command-line arguments
@dataclass
class ModelArguments:
"""
Arguments pertaining to which model/config/tokenizer we are going to fine-tune from.
"""
model_name_or_path: str = field(
metadata={"help": "Path to pretrained model or model identifier from huggingface.co/models"}
)
config_name: Optional[str] = field(
default=None, metadata={"help": "Pretrained config name or path if not the same as model_name"}
)
tokenizer_name: Optional[str] = field(
default=None, metadata={"help": "Pretrained tokenizer name or path if not the same as model_name"}
)
cache_dir: Optional[str] = field(
default=None,
metadata={"help": "Where do you want to store the pretrained models downloaded from huggingface.co"},
)
model_revision: str = field(
default="main",
metadata={"help": "The specific model version to use (can be a branch name, tag name or commit id)."},
)
use_auth_token: bool = field(
default=False,
metadata={
"help": "Will use the token generated when running `transformers-cli login` (necessary to use this script "
"with private models)."
},
)
@dataclass
class DataTrainingArguments:
"""
Arguments pertaining to what data we are going to input our model for training and eval.
"""
task_name: Optional[str] = field(default="ner", metadata={"help": "The name of the task (ner, pos...)."})
dataset_name: Optional[str] = field(
default=None, metadata={"help": "The name of the dataset to use (via the datasets library)."}
)
dataset_config_name: Optional[str] = field(
default=None, metadata={"help": "The configuration name of the dataset to use (via the datasets library)."}
)
train_file: Optional[str] = field(
default=None, metadata={"help": "The input training data file (a csv or JSON file)."}
)
validation_file: Optional[str] = field(
default=None,
metadata={"help": "An optional input evaluation data file to evaluate on (a csv or JSON file)."},
)
test_file: Optional[str] = field(
default=None,
metadata={"help": "An optional input test data file to predict on (a csv or JSON file)."},
)
text_column_name: Optional[str] = field(
default=None, metadata={"help": "The column name of text to input in the file (a csv or JSON file)."}
)
label_column_name: Optional[str] = field(
default=None, metadata={"help": "The column name of label to input in the file (a csv or JSON file)."}
)
overwrite_cache: bool = field(
default=False, metadata={"help": "Overwrite the cached training and evaluation sets"}
)
preprocessing_num_workers: Optional[int] = field(
default=None,
metadata={"help": "The number of processes to use for the preprocessing."},
)
max_length: Optional[int] = field(default=256, metadata={"help": "Max length (in tokens) for truncation/padding"})
pad_to_max_length: bool = field(
default=False,
metadata={
"help": "Whether to pad all samples to model maximum sentence length. "
"If False, will pad the samples dynamically when batching to the maximum length in the batch. More "
"efficient on GPU but very bad for TPU."
},
)
max_train_samples: Optional[int] = field(
default=None,
metadata={
"help": "For debugging purposes or quicker training, truncate the number of training examples to this "
"value if set."
},
)
max_eval_samples: Optional[int] = field(
default=None,
metadata={
"help": "For debugging purposes or quicker training, truncate the number of evaluation examples to this "
"value if set."
},
)
max_predict_samples: Optional[int] = field(
default=None,
metadata={
"help": "For debugging purposes or quicker training, truncate the number of prediction examples to this "
"value if set."
},
)
label_all_tokens: bool = field(
default=False,
metadata={
"help": "Whether to put the label for one word on all tokens of generated by that word or just on the "
"one (in which case the other tokens will have a padding index)."
},
)
return_entity_level_metrics: bool = field(
default=False,
metadata={"help": "Whether to return all the entity levels during evaluation or just the overall ones."},
)
def __post_init__(self):
if self.dataset_name is None and self.train_file is None and self.validation_file is None:
raise ValueError("Need either a dataset name or a training/validation file.")
else:
if self.train_file is not None:
extension = self.train_file.split(".")[-1]
assert extension in ["csv", "json"], "`train_file` should be a csv or a json file."
if self.validation_file is not None:
extension = self.validation_file.split(".")[-1]
assert extension in ["csv", "json"], "`validation_file` should be a csv or a json file."
self.task_name = self.task_name.lower()
# endregion
# region Data generator
def sample_generator(dataset, tokenizer, shuffle, pad_to_multiple_of=None):
# Trim off the last partial batch if present
if shuffle:
sample_ordering = np.random.permutation(len(dataset))
else:
sample_ordering = np.arange(len(dataset))
for sample_idx in sample_ordering:
example = dataset[int(sample_idx)]
# Handle dicts with proper padding and conversion to tensor.
example = tokenizer.pad(example, return_tensors="np", pad_to_multiple_of=pad_to_multiple_of)
if tokenizer.pad_token_id is not None:
example["labels"][example["attention_mask"] == 0] = -100
example = {key: tf.convert_to_tensor(arr) for key, arr in example.items()}
yield example, example["labels"] # TF needs some kind of labels, even if we don't use them
return
# endregion
# region Helper functions
def dataset_to_tf(dataset, tokenizer, total_batch_size, num_epochs, shuffle):
train_generator = partial(sample_generator, dataset, tokenizer, shuffle=shuffle)
train_signature = {
feature: tf.TensorSpec(shape=(None,), dtype=tf.int64)
for feature in dataset.features
if feature != "special_tokens_mask"
}
# This may need to be changed depending on your particular model or tokenizer!
padding_values = {key: tf.convert_to_tensor(0, dtype=tf.int64) for key in dataset.features}
padding_values["labels"] = tf.convert_to_tensor(-100, dtype=tf.int64)
if tokenizer.pad_token_id is not None:
padding_values["input_ids"] = tf.convert_to_tensor(tokenizer.pad_token_id, dtype=tf.int64)
train_signature["labels"] = train_signature["input_ids"]
train_signature = (train_signature, train_signature["labels"])
options = tf.data.Options()
options.experimental_distribute.auto_shard_policy = tf.data.experimental.AutoShardPolicy.OFF
tf_dataset = (
tf.data.Dataset.from_generator(train_generator, output_signature=train_signature)
.with_options(options)
.padded_batch(
batch_size=total_batch_size,
drop_remainder=True,
padding_values=(padding_values, np.array(0, dtype=np.int64)),
)
.repeat(int(num_epochs))
)
return tf_dataset
# endregion
def main():
# region Argument Parsing
parser = HfArgumentParser((ModelArguments, DataTrainingArguments, TFTrainingArguments))
model_args, data_args, training_args = parser.parse_args_into_dataclasses()
# endregion
# region Setup logging
# we only want one process per machine to log things on the screen.
# accelerator.is_local_main_process is only True for one process per machine.
logger.setLevel(logging.INFO)
datasets.utils.logging.set_verbosity_warning()
transformers.utils.logging.set_verbosity_info()
# If passed along, set the training seed now.
if training_args.seed is not None:
set_seed(training_args.seed)
# endregion
# region Loading datasets
# Get the datasets: you can either provide your own CSV/JSON/TXT training and evaluation files (see below)
# or just provide the name of one of the public datasets for token classification task available on the hub at https://huggingface.co/datasets/
# (the dataset will be downloaded automatically from the datasets Hub).
#
# For CSV/JSON files, this script will use the column called 'tokens' or the first column if no column called
# 'tokens' is found. You can easily tweak this behavior (see below).
#
# In distributed training, the load_dataset function guarantee that only one local process can concurrently
# download the dataset.
if data_args.dataset_name is not None:
# Downloading and loading a dataset from the hub.
raw_datasets = load_dataset(data_args.dataset_name, data_args.dataset_config_name)
else:
data_files = {}
if data_args.train_file is not None:
data_files["train"] = data_args.train_file
if data_args.validation_file is not None:
data_files["validation"] = data_args.validation_file
extension = data_args.train_file.split(".")[-1]
raw_datasets = load_dataset(extension, data_files=data_files)
# See more about loading any type of standard or custom dataset (from files, python dict, pandas DataFrame, etc) at
# https://huggingface.co/docs/datasets/loading_datasets.html.
if raw_datasets["train"] is not None:
column_names = raw_datasets["train"].column_names
features = raw_datasets["train"].features
else:
column_names = raw_datasets["validation"].column_names
features = raw_datasets["validation"].features
if data_args.text_column_name is not None:
text_column_name = data_args.text_column_name
elif "tokens" in column_names:
text_column_name = "tokens"
else:
text_column_name = column_names[0]
if data_args.label_column_name is not None:
label_column_name = data_args.label_column_name
elif f"{data_args.task_name}_tags" in column_names:
label_column_name = f"{data_args.task_name}_tags"
else:
label_column_name = column_names[1]
# In the event the labels are not a `Sequence[ClassLabel]`, we will need to go through the dataset to get the
# unique labels.
def get_label_list(labels):
unique_labels = set()
for label in labels:
unique_labels = unique_labels | set(label)
label_list = list(unique_labels)
label_list.sort()
return label_list
if isinstance(features[label_column_name].feature, ClassLabel):
label_list = features[label_column_name].feature.names
# No need to convert the labels since they are already ints.
label_to_id = {i: i for i in range(len(label_list))}
else:
label_list = get_label_list(raw_datasets["train"][label_column_name])
label_to_id = {l: i for i, l in enumerate(label_list)}
num_labels = len(label_list)
# endregion
# region Load config and tokenizer
#
# In distributed training, the .from_pretrained methods guarantee that only one local process can concurrently
# download model & vocab.
if model_args.config_name:
config = AutoConfig.from_pretrained(model_args.config_name, num_labels=num_labels)
elif model_args.model_name_or_path:
config = AutoConfig.from_pretrained(model_args.model_name_or_path, num_labels=num_labels)
else:
config = CONFIG_MAPPING[model_args.model_type]()
logger.warning("You are instantiating a new config instance from scratch.")
tokenizer_name_or_path = model_args.tokenizer_name if model_args.tokenizer_name else model_args.model_name_or_path
if not tokenizer_name_or_path:
raise ValueError(
"You are instantiating a new tokenizer from scratch. This is not supported by this script."
"You can do it from another script, save it, and load it from here, using --tokenizer_name."
)
if config.model_type in {"gpt2", "roberta"}:
tokenizer = AutoTokenizer.from_pretrained(tokenizer_name_or_path, use_fast=True, add_prefix_space=True)
else:
tokenizer = AutoTokenizer.from_pretrained(tokenizer_name_or_path, use_fast=True)
# endregion
# region Preprocessing the raw datasets
# First we tokenize all the texts.
padding = "max_length" if data_args.pad_to_max_length else False
# Tokenize all texts and align the labels with them.
def tokenize_and_align_labels(examples):
tokenized_inputs = tokenizer(
examples[text_column_name],
max_length=data_args.max_length,
padding=padding,
truncation=True,
# We use this argument because the texts in our dataset are lists of words (with a label for each word).
is_split_into_words=True,
)
labels = []
for i, label in enumerate(examples[label_column_name]):
word_ids = tokenized_inputs.word_ids(batch_index=i)
previous_word_idx = None
label_ids = []
for word_idx in word_ids:
# Special tokens have a word id that is None. We set the label to -100 so they are automatically
# ignored in the loss function.
if word_idx is None:
label_ids.append(-100)
# We set the label for the first token of each word.
elif word_idx != previous_word_idx:
label_ids.append(label_to_id[label[word_idx]])
# For the other tokens in a word, we set the label to either the current label or -100, depending on
# the label_all_tokens flag.
else:
label_ids.append(label_to_id[label[word_idx]] if data_args.label_all_tokens else -100)
previous_word_idx = word_idx
labels.append(label_ids)
tokenized_inputs["labels"] = labels
return tokenized_inputs
processed_raw_datasets = raw_datasets.map(
tokenize_and_align_labels,
batched=True,
remove_columns=raw_datasets["train"].column_names,
desc="Running tokenizer on dataset",
)
train_dataset = processed_raw_datasets["train"]
eval_dataset = processed_raw_datasets["validation"]
# Log a few random samples from the training set:
for index in random.sample(range(len(train_dataset)), 3):
logger.info(f"Sample {index} of the training set: {train_dataset[index]}.")
# endregion
with training_args.strategy.scope():
# region Initialize model
if model_args.model_name_or_path:
model = TFAutoModelForTokenClassification.from_pretrained(
model_args.model_name_or_path,
config=config,
)
else:
logger.info("Training new model from scratch")
model = TFAutoModelForTokenClassification.from_config(config)
model.resize_token_embeddings(len(tokenizer))
# endregion
# region Create TF datasets
num_replicas = training_args.strategy.num_replicas_in_sync
total_train_batch_size = training_args.per_device_train_batch_size * num_replicas
train_batches_per_epoch = len(train_dataset) // total_train_batch_size
tf_train_dataset = dataset_to_tf(
train_dataset,
tokenizer,
total_batch_size=total_train_batch_size,
num_epochs=training_args.num_train_epochs,
shuffle=True,
)
total_eval_batch_size = training_args.per_device_eval_batch_size * num_replicas
eval_batches_per_epoch = len(eval_dataset) // total_eval_batch_size
tf_eval_dataset = dataset_to_tf(
eval_dataset,
tokenizer,
total_batch_size=total_eval_batch_size,
num_epochs=training_args.num_train_epochs,
shuffle=False,
)
# endregion
# region Optimizer, loss and compilation
optimizer, lr_schedule = create_optimizer(
init_lr=training_args.learning_rate,
num_train_steps=int(training_args.num_train_epochs * train_batches_per_epoch),
num_warmup_steps=training_args.warmup_steps,
adam_beta1=training_args.adam_beta1,
adam_beta2=training_args.adam_beta2,
adam_epsilon=training_args.adam_epsilon,
weight_decay_rate=training_args.weight_decay,
)
def dummy_loss(y_true, y_pred):
return tf.reduce_mean(y_pred)
model.compile(loss={"loss": dummy_loss}, optimizer=optimizer)
# endregion
# Metrics
metric = load_metric("seqeval")
def get_labels(y_pred, y_true):
# Transform predictions and references tensos to numpy arrays
# Remove ignored index (special tokens)
true_predictions = [
[label_list[p] for (p, l) in zip(pred, gold_label) if l != -100]
for pred, gold_label in zip(y_pred, y_true)
]
true_labels = [
[label_list[l] for (p, l) in zip(pred, gold_label) if l != -100]
for pred, gold_label in zip(y_pred, y_true)
]
return true_predictions, true_labels
def compute_metrics():
results = metric.compute()
if data_args.return_entity_level_metrics:
# Unpack nested dictionaries
final_results = {}
for key, value in results.items():
if isinstance(value, dict):
for n, v in value.items():
final_results[f"{key}_{n}"] = v
else:
final_results[key] = value
return final_results
else:
return {
"precision": results["overall_precision"],
"recall": results["overall_recall"],
"f1": results["overall_f1"],
"accuracy": results["overall_accuracy"],
}
# endregion
# region Training
logger.info("***** Running training *****")
logger.info(f" Num examples = {len(train_dataset)}")
logger.info(f" Num Epochs = {training_args.num_train_epochs}")
logger.info(f" Instantaneous batch size per device = {training_args.per_device_train_batch_size}")
logger.info(f" Total train batch size = {total_train_batch_size}")
# Only show the progress bar once on each machine.
model.fit(
tf_train_dataset,
validation_data=tf_eval_dataset,
epochs=int(training_args.num_train_epochs),
steps_per_epoch=train_batches_per_epoch,
validation_steps=eval_batches_per_epoch,
)
# endregion
# region Predictions
# For predictions, we preload the entire validation set - note that if you have a really giant validation
# set, you might need to change this!
eval_inputs = {key: tf.ragged.constant(eval_dataset[key]).to_tensor() for key in eval_dataset.features}
predictions = model.predict(eval_inputs, batch_size=training_args.per_device_eval_batch_size)["logits"]
predictions = tf.math.argmax(predictions, axis=-1)
labels = np.array(eval_inputs["labels"])
labels[np.array(eval_inputs["attention_mask"]) == 0] = -100
preds, refs = get_labels(predictions, labels)
metric.add_batch(
predictions=preds,
references=refs,
)
eval_metric = compute_metrics()
logger.info("Evaluation metrics:")
for key, val in eval_metric.items():
logger.info(f"{key}: {val:.4f}")
# endregion
# We don't do predictions in the strategy scope because there are some issues in there right now.
# They'll get fixed eventually, promise!
if training_args.output_dir is not None:
model.save_pretrained(training_args.output_dir)
if __name__ == "__main__":
main()
| 22,260 | 40.377323 | 147 | py |
robust-transformers | robust-transformers-main/examples/tensorflow/summarization/run_summarization.py | #!/usr/bin/env python
# coding=utf-8
# Copyright 2021 The HuggingFace Team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
"""
Fine-tuning the library models for summarization.
"""
# You can also adapt this script on your own sequence to sequence task. Pointers for this are left as comments.
import logging
import os
import sys
from dataclasses import dataclass, field
from functools import partial
from typing import Optional
import datasets
import nltk # Here to have a nice missing dependency error message early on
import numpy as np
import tensorflow as tf
from datasets import load_dataset, load_metric
from tqdm import tqdm
import transformers
from filelock import FileLock
from transformers import (
AutoConfig,
AutoTokenizer,
HfArgumentParser,
TFAutoModelForSeq2SeqLM,
TFTrainingArguments,
create_optimizer,
set_seed,
)
from transformers.file_utils import is_offline_mode
from transformers.trainer_utils import get_last_checkpoint
from transformers.utils import check_min_version
from transformers.utils.versions import require_version
# region Checking dependencies
# Will error if the minimal version of Transformers is not installed. Remove at your own risks.
check_min_version("4.18.0.dev0")
require_version("datasets>=1.8.0", "To fix: pip install -r examples/pytorch/summarization/requirements.txt")
logger = logging.getLogger(__name__)
try:
nltk.data.find("tokenizers/punkt")
except (LookupError, OSError):
if is_offline_mode():
raise LookupError(
"Offline mode: run this script without TRANSFORMERS_OFFLINE first to download nltk data files"
)
with FileLock(".lock") as lock:
nltk.download("punkt", quiet=True)
# endregion
# region Arguments
@dataclass
class ModelArguments:
"""
Arguments pertaining to which model/config/tokenizer we are going to fine-tune from.
"""
model_name_or_path: str = field(
metadata={"help": "Path to pretrained model or model identifier from huggingface.co/models"}
)
config_name: Optional[str] = field(
default=None, metadata={"help": "Pretrained config name or path if not the same as model_name"}
)
tokenizer_name: Optional[str] = field(
default=None, metadata={"help": "Pretrained tokenizer name or path if not the same as model_name"}
)
cache_dir: Optional[str] = field(
default=None,
metadata={"help": "Where to store the pretrained models downloaded from huggingface.co"},
)
use_fast_tokenizer: bool = field(
default=True,
metadata={"help": "Whether to use one of the fast tokenizer (backed by the tokenizers library) or not."},
)
model_revision: str = field(
default="main",
metadata={"help": "The specific model version to use (can be a branch name, tag name or commit id)."},
)
use_auth_token: bool = field(
default=False,
metadata={
"help": "Will use the token generated when running `transformers-cli login` (necessary to use this script "
"with private models)."
},
)
@dataclass
class DataTrainingArguments:
"""
Arguments pertaining to what data we are going to input our model for training and eval.
"""
dataset_name: Optional[str] = field(
default=None, metadata={"help": "The name of the dataset to use (via the datasets library)."}
)
dataset_config_name: Optional[str] = field(
default=None, metadata={"help": "The configuration name of the dataset to use (via the datasets library)."}
)
text_column: Optional[str] = field(
default=None,
metadata={"help": "The name of the column in the datasets containing the full texts (for summarization)."},
)
summary_column: Optional[str] = field(
default=None,
metadata={"help": "The name of the column in the datasets containing the summaries (for summarization)."},
)
train_file: Optional[str] = field(
default=None, metadata={"help": "The input training data file (a jsonlines or csv file)."}
)
validation_file: Optional[str] = field(
default=None,
metadata={
"help": "An optional input evaluation data file to evaluate the metrics (rouge) on "
"(a jsonlines or csv file)."
},
)
test_file: Optional[str] = field(
default=None,
metadata={
"help": "An optional input test data file to evaluate the metrics (rouge) on " "(a jsonlines or csv file)."
},
)
overwrite_cache: bool = field(
default=False, metadata={"help": "Overwrite the cached training and evaluation sets"}
)
preprocessing_num_workers: Optional[int] = field(
default=None,
metadata={"help": "The number of processes to use for the preprocessing."},
)
max_source_length: Optional[int] = field(
default=1024,
metadata={
"help": "The maximum total input sequence length after tokenization. Sequences longer "
"than this will be truncated, sequences shorter will be padded."
},
)
max_target_length: Optional[int] = field(
default=128,
metadata={
"help": "The maximum total sequence length for target text after tokenization. Sequences longer "
"than this will be truncated, sequences shorter will be padded."
},
)
val_max_target_length: Optional[int] = field(
default=None,
metadata={
"help": "The maximum total sequence length for validation target text after tokenization. Sequences longer "
"than this will be truncated, sequences shorter will be padded. Will default to `max_target_length`."
"This argument is also used to override the ``max_length`` param of ``model.generate``, which is used "
"during ``evaluate`` and ``predict``."
},
)
pad_to_max_length: bool = field(
default=False,
metadata={
"help": "Whether to pad all samples to model maximum sentence length. "
"If False, will pad the samples dynamically when batching to the maximum length in the batch. More "
"efficient on GPU but very bad for TPU."
},
)
max_train_samples: Optional[int] = field(
default=None,
metadata={
"help": "For debugging purposes or quicker training, truncate the number of training examples to this "
"value if set."
},
)
max_eval_samples: Optional[int] = field(
default=None,
metadata={
"help": "For debugging purposes or quicker training, truncate the number of evaluation examples to this "
"value if set."
},
)
max_predict_samples: Optional[int] = field(
default=None,
metadata={
"help": "For debugging purposes or quicker training, truncate the number of prediction examples to this "
"value if set."
},
)
num_beams: Optional[int] = field(
default=None,
metadata={
"help": "Number of beams to use for evaluation. This argument will be passed to ``model.generate``, "
"which is used during ``evaluate`` and ``predict``."
},
)
ignore_pad_token_for_loss: bool = field(
default=True,
metadata={
"help": "Whether to ignore the tokens corresponding to padded labels in the loss computation or not."
},
)
source_prefix: Optional[str] = field(
default=None, metadata={"help": "A prefix to add before every source text (useful for T5 models)."}
)
def __post_init__(self):
if self.dataset_name is None and self.train_file is None and self.validation_file is None:
raise ValueError("Need either a dataset name or a training/validation file.")
else:
if self.train_file is not None:
extension = self.train_file.split(".")[-1]
assert extension in ["csv", "json"], "`train_file` should be a csv or a json file."
if self.validation_file is not None:
extension = self.validation_file.split(".")[-1]
assert extension in ["csv", "json"], "`validation_file` should be a csv or a json file."
if self.val_max_target_length is None:
self.val_max_target_length = self.max_target_length
# endregion
# region Dataset name mappings
summarization_name_mapping = {
"amazon_reviews_multi": ("review_body", "review_title"),
"big_patent": ("description", "abstract"),
"cnn_dailymail": ("article", "highlights"),
"orange_sum": ("text", "summary"),
"pn_summary": ("article", "summary"),
"psc": ("extract_text", "summary_text"),
"samsum": ("dialogue", "summary"),
"thaisum": ("body", "summary"),
"xglue": ("news_body", "news_title"),
"xsum": ("document", "summary"),
"wiki_summary": ("article", "highlights"),
}
# endregion
# region Data generator
def sample_generator(dataset, model, tokenizer, shuffle, pad_to_multiple_of=None):
if shuffle:
sample_ordering = np.random.permutation(len(dataset))
else:
sample_ordering = np.arange(len(dataset))
for sample_idx in sample_ordering:
example = dataset[int(sample_idx)]
# Handle dicts with proper padding and conversion to tensor.
example = tokenizer.pad(example, return_tensors="np", pad_to_multiple_of=pad_to_multiple_of)
example = {key: tf.convert_to_tensor(arr, dtype_hint=tf.int32) for key, arr in example.items()}
if model is not None and hasattr(model, "prepare_decoder_input_ids_from_labels"):
decoder_input_ids = model.prepare_decoder_input_ids_from_labels(
labels=tf.expand_dims(example["labels"], 0)
)
example["decoder_input_ids"] = tf.squeeze(decoder_input_ids, 0)
yield example, example["labels"] # TF needs some kind of labels, even if we don't use them
return
# endregion
# region Helper functions
def dataset_to_tf(dataset, model, tokenizer, total_batch_size, num_epochs, shuffle):
if dataset is None:
return None
train_generator = partial(sample_generator, dataset, model, tokenizer, shuffle=shuffle)
train_signature = {
feature: tf.TensorSpec(shape=(None,), dtype=tf.int32)
for feature in dataset.features
if feature != "special_tokens_mask"
}
if (
model is not None
and "decoder_input_ids" not in train_signature
and hasattr(model, "prepare_decoder_input_ids_from_labels")
):
train_signature["decoder_input_ids"] = train_signature["labels"]
# This may need to be changed depending on your particular model or tokenizer!
padding_values = {
key: tf.convert_to_tensor(tokenizer.pad_token_id if tokenizer.pad_token_id is not None else 0, dtype=tf.int32)
for key in train_signature.keys()
}
padding_values["labels"] = tf.convert_to_tensor(-100, dtype=tf.int32)
train_signature["labels"] = train_signature["input_ids"]
train_signature = (train_signature, train_signature["labels"])
options = tf.data.Options()
options.experimental_distribute.auto_shard_policy = tf.data.experimental.AutoShardPolicy.OFF
tf_dataset = (
tf.data.Dataset.from_generator(train_generator, output_signature=train_signature)
.with_options(options)
.padded_batch(
batch_size=total_batch_size,
drop_remainder=True,
padding_values=(padding_values, np.array(-100, dtype=np.int32)),
)
.repeat(int(num_epochs))
)
return tf_dataset
# endregion
def main():
# region Argument parsing
# See all possible arguments in src/transformers/training_args.py
# or by passing the --help flag to this script.
# We now keep distinct sets of args, for a cleaner separation of concerns.
parser = HfArgumentParser((ModelArguments, DataTrainingArguments, TFTrainingArguments))
if len(sys.argv) == 2 and sys.argv[1].endswith(".json"):
# If we pass only one argument to the script and it's the path to a json file,
# let's parse it to get our arguments.
model_args, data_args, training_args = parser.parse_json_file(json_file=os.path.abspath(sys.argv[1]))
else:
model_args, data_args, training_args = parser.parse_args_into_dataclasses()
# endregion
# region Logging
logging.basicConfig(
format="%(asctime)s - %(levelname)s - %(name)s - %(message)s",
datefmt="%m/%d/%Y %H:%M:%S",
handlers=[logging.StreamHandler(sys.stdout)],
)
logger.setLevel(logging.INFO)
datasets.utils.logging.set_verbosity(logging.INFO)
transformers.utils.logging.set_verbosity(logging.INFO)
# Log on each process the small summary:
logger.info(f"Training/evaluation parameters {training_args}")
# endregion
# region T5 special-casing
if data_args.source_prefix is None and model_args.model_name_or_path in [
"t5-small",
"t5-base",
"t5-large",
"t5-3b",
"t5-11b",
]:
logger.warning(
"You're running a t5 model but didn't provide a source prefix, which is the expected, e.g. with "
"`--source_prefix 'summarize: ' `"
)
# endregion
# region Detecting last checkpoint
last_checkpoint = None
if os.path.isdir(training_args.output_dir) and training_args.do_train and not training_args.overwrite_output_dir:
last_checkpoint = get_last_checkpoint(training_args.output_dir)
if last_checkpoint is None and len(os.listdir(training_args.output_dir)) > 0:
raise ValueError(
f"Output directory ({training_args.output_dir}) already exists and is not empty. "
"Use --overwrite_output_dir to overcome."
)
elif last_checkpoint is not None and training_args.resume_from_checkpoint is None:
logger.info(
f"Checkpoint detected, resuming training at {last_checkpoint}. To avoid this behavior, change "
"the `--output_dir` or add `--overwrite_output_dir` to train from scratch."
)
# endregion
# Set seed before initializing model.
set_seed(training_args.seed)
# region Load datasets
# Get the datasets: you can either provide your own CSV/JSON training and evaluation files (see below)
# or just provide the name of one of the public datasets available on the hub at https://huggingface.co/datasets/
# (the dataset will be downloaded automatically from the datasets Hub).
#
# For CSV/JSON files this script will use the first column for the full texts and the second column for the
# summaries (unless you specify column names for this with the `text_column` and `summary_column` arguments).
#
# In distributed training, the load_dataset function guarantee that only one local process can concurrently
# download the dataset.
if data_args.dataset_name is not None:
# Downloading and loading a dataset from the hub.
raw_datasets = load_dataset(
data_args.dataset_name, data_args.dataset_config_name, cache_dir=model_args.cache_dir
)
else:
data_files = {}
if data_args.train_file is not None:
data_files["train"] = data_args.train_file
extension = data_args.train_file.split(".")[-1]
if data_args.validation_file is not None:
data_files["validation"] = data_args.validation_file
extension = data_args.validation_file.split(".")[-1]
if data_args.test_file is not None:
data_files["test"] = data_args.test_file
extension = data_args.test_file.split(".")[-1]
raw_datasets = load_dataset(extension, data_files=data_files, cache_dir=model_args.cache_dir)
# See more about loading any type of standard or custom dataset (from files, python dict, pandas DataFrame, etc) at
# https://huggingface.co/docs/datasets/loading_datasets.html.
# endregion
# region Load model config and tokenizer
#
# Distributed training:
# The .from_pretrained methods guarantee that only one local process can concurrently
# download model & vocab.
config = AutoConfig.from_pretrained(
model_args.config_name if model_args.config_name else model_args.model_name_or_path,
cache_dir=model_args.cache_dir,
revision=model_args.model_revision,
use_auth_token=True if model_args.use_auth_token else None,
)
tokenizer = AutoTokenizer.from_pretrained(
model_args.tokenizer_name if model_args.tokenizer_name else model_args.model_name_or_path,
cache_dir=model_args.cache_dir,
use_fast=model_args.use_fast_tokenizer,
revision=model_args.model_revision,
use_auth_token=True if model_args.use_auth_token else None,
)
prefix = data_args.source_prefix if data_args.source_prefix is not None else ""
# endregion
# region Dataset preprocessing
# We need to tokenize inputs and targets.
if training_args.do_train:
column_names = raw_datasets["train"].column_names
elif training_args.do_eval:
column_names = raw_datasets["validation"].column_names
else:
logger.info("There is nothing to do. Please pass `do_train`, and/or `do_eval`.")
return
# Get the column names for input/target.
dataset_columns = summarization_name_mapping.get(data_args.dataset_name, None)
if data_args.text_column is None:
text_column = dataset_columns[0] if dataset_columns is not None else column_names[0]
else:
text_column = data_args.text_column
if text_column not in column_names:
raise ValueError(
f"--text_column' value '{data_args.text_column}' needs to be one of: {', '.join(column_names)}"
)
if data_args.summary_column is None:
summary_column = dataset_columns[1] if dataset_columns is not None else column_names[1]
else:
summary_column = data_args.summary_column
if summary_column not in column_names:
raise ValueError(
f"--summary_column' value '{data_args.summary_column}' needs to be one of: {', '.join(column_names)}"
)
# Temporarily set max_target_length for training.
max_target_length = data_args.max_target_length
padding = "max_length" if data_args.pad_to_max_length else False
def preprocess_function(examples):
inputs = examples[text_column]
targets = examples[summary_column]
inputs = [prefix + inp for inp in inputs]
model_inputs = tokenizer(inputs, max_length=data_args.max_source_length, padding=padding, truncation=True)
# Setup the tokenizer for targets
with tokenizer.as_target_tokenizer():
labels = tokenizer(targets, max_length=max_target_length, padding=padding, truncation=True)
# If we are padding here, replace all tokenizer.pad_token_id in the labels by -100 when we want to ignore
# padding in the loss.
if padding == "max_length" and data_args.ignore_pad_token_for_loss:
labels["input_ids"] = [
[(l if l != tokenizer.pad_token_id else -100) for l in label] for label in labels["input_ids"]
]
model_inputs["labels"] = labels["input_ids"]
return model_inputs
if training_args.do_train:
if "train" not in raw_datasets:
raise ValueError("--do_train requires a train dataset")
train_dataset = raw_datasets["train"]
if data_args.max_train_samples is not None:
train_dataset = train_dataset.select(range(data_args.max_train_samples))
with training_args.main_process_first(desc="train dataset map pre-processing"):
train_dataset = train_dataset.map(
preprocess_function,
batched=True,
num_proc=data_args.preprocessing_num_workers,
remove_columns=column_names,
load_from_cache_file=not data_args.overwrite_cache,
desc="Running tokenizer on train dataset",
)
else:
train_dataset = None
if training_args.do_eval:
max_target_length = data_args.val_max_target_length
if "validation" not in raw_datasets:
raise ValueError("--do_eval requires a validation dataset")
eval_dataset = raw_datasets["validation"]
if data_args.max_eval_samples is not None:
eval_dataset = eval_dataset.select(range(data_args.max_eval_samples))
with training_args.main_process_first(desc="validation dataset map pre-processing"):
eval_dataset = eval_dataset.map(
preprocess_function,
batched=True,
num_proc=data_args.preprocessing_num_workers,
remove_columns=column_names,
load_from_cache_file=not data_args.overwrite_cache,
desc="Running tokenizer on validation dataset",
)
else:
eval_dataset = None
# endregion
# region Text preprocessing
def postprocess_text(preds, labels):
preds = [pred.strip() for pred in preds]
labels = [label.strip() for label in labels]
# rougeLSum expects newline after each sentence
preds = ["\n".join(nltk.sent_tokenize(pred)) for pred in preds]
labels = ["\n".join(nltk.sent_tokenize(label)) for label in labels]
return preds, labels
# endregion
with training_args.strategy.scope():
# region Prepare model
model = TFAutoModelForSeq2SeqLM.from_pretrained(
model_args.model_name_or_path,
config=config,
cache_dir=model_args.cache_dir,
revision=model_args.model_revision,
use_auth_token=True if model_args.use_auth_token else None,
)
model.resize_token_embeddings(len(tokenizer))
# endregion
# region Prepare TF Dataset objects
if model.config.decoder_start_token_id is None:
raise ValueError("Make sure that `config.decoder_start_token_id` is correctly defined")
num_replicas = training_args.strategy.num_replicas_in_sync
total_train_batch_size = training_args.per_device_train_batch_size * num_replicas
total_eval_batch_size = training_args.per_device_eval_batch_size * num_replicas
tf_train_dataset = dataset_to_tf(
train_dataset,
model,
tokenizer,
total_batch_size=total_train_batch_size,
num_epochs=training_args.num_train_epochs,
shuffle=True,
)
tf_eval_dataset = dataset_to_tf(
eval_dataset,
model,
tokenizer,
total_eval_batch_size,
num_epochs=1,
shuffle=False,
)
# endregion
# region Optimizer, loss and LR scheduling
# Scheduler and math around the number of training steps.
num_update_steps_per_epoch = len(train_dataset) // total_train_batch_size
num_train_steps = training_args.num_train_epochs * num_update_steps_per_epoch
optimizer, lr_schedule = create_optimizer(
init_lr=training_args.learning_rate, num_train_steps=num_train_steps, num_warmup_steps=0
)
def masked_sparse_categorical_crossentropy(y_true, y_pred):
# We clip the negative labels to 0 to avoid NaNs appearing in the output and
# fouling up everything that comes afterwards. The loss values corresponding to clipped values
# will be masked later anyway, but even masked NaNs seem to cause overflows for some reason.
# 1e6 is chosen as a reasonable upper bound for the number of token indices - in the unlikely
# event that you have more than 1 million tokens in your vocabulary, consider increasing this value.
# More pragmatically, consider redesigning your tokenizer.
losses = tf.keras.losses.sparse_categorical_crossentropy(
tf.clip_by_value(y_true, 0, int(1e6)), y_pred, from_logits=True
)
# Compute the per-sample loss only over the unmasked tokens
losses = tf.ragged.boolean_mask(losses, y_true != -100)
losses = tf.reduce_mean(losses, axis=-1)
return losses
# endregion
# region Metric
metric = load_metric("rouge")
# endregion
# region Training
model.compile(loss={"logits": masked_sparse_categorical_crossentropy}, optimizer=optimizer)
if training_args.do_train:
logger.info("***** Running training *****")
logger.info(f" Num examples = {len(train_dataset)}")
logger.info(f" Num Epochs = {training_args.num_train_epochs}")
logger.info(f" Instantaneous batch size per device = {training_args.per_device_train_batch_size}")
logger.info(f" Total train batch size = {total_train_batch_size}")
logger.info(f" Total optimization steps = {num_train_steps}")
model.fit(
tf_train_dataset,
epochs=int(training_args.num_train_epochs),
steps_per_epoch=num_update_steps_per_epoch,
)
# endregion
# region Validation
if data_args.val_max_target_length is None:
data_args.val_max_target_length = data_args.max_target_length
gen_kwargs = {
"max_length": data_args.val_max_target_length if data_args is not None else config.max_length,
"num_beams": data_args.num_beams,
}
if training_args.do_eval:
logger.info("Evaluation...")
for batch, labels in tqdm(
tf_eval_dataset, total=len(eval_dataset) // training_args.per_device_eval_batch_size
):
batch.update(gen_kwargs)
generated_tokens = model.generate(**batch)
if isinstance(generated_tokens, tuple):
generated_tokens = generated_tokens[0]
decoded_preds = tokenizer.batch_decode(generated_tokens, skip_special_tokens=True)
labels = np.where(labels != -100, labels, tokenizer.pad_token_id)
decoded_labels = tokenizer.batch_decode(labels, skip_special_tokens=True)
decoded_preds, decoded_labels = postprocess_text(decoded_preds, decoded_labels)
metric.add_batch(predictions=decoded_preds, references=decoded_labels)
result = metric.compute(use_stemmer=True)
# Extract a few results from ROUGE
result = {key: value.mid.fmeasure * 100 for key, value in result.items()}
result = {k: round(v, 4) for k, v in result.items()}
logger.info(result)
# endregion
if training_args.output_dir is not None:
model.save_pretrained(training_args.output_dir)
if __name__ == "__main__":
main()
| 27,681 | 40.689759 | 120 | py |
robust-transformers | robust-transformers-main/examples/tensorflow/text-classification/run_glue.py | #!/usr/bin/env python
# coding=utf-8
# Copyright 2020 The HuggingFace Inc. team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
""" Finetuning the library models for sequence classification on GLUE."""
# You can also adapt this script on your own text classification task. Pointers for this are left as comments.
import logging
import os
import sys
from dataclasses import dataclass, field
from typing import Optional
import numpy as np
import tensorflow as tf
from datasets import load_dataset, load_metric
import transformers
from transformers import (
AutoConfig,
AutoTokenizer,
DataCollatorWithPadding,
DefaultDataCollator,
HfArgumentParser,
PretrainedConfig,
TFAutoModelForSequenceClassification,
TFTrainingArguments,
set_seed,
)
from transformers.trainer_utils import get_last_checkpoint, is_main_process
from transformers.utils import check_min_version
# region Helper functions
class SavePretrainedCallback(tf.keras.callbacks.Callback):
# Hugging Face models have a save_pretrained() method that saves both the weights and the necessary
# metadata to allow them to be loaded as a pretrained model in future. This is a simple Keras callback
# that saves the model with this method after each epoch.
def __init__(self, output_dir, **kwargs):
super().__init__()
self.output_dir = output_dir
def on_epoch_end(self, epoch, logs=None):
self.model.save_pretrained(self.output_dir)
# endregion
# Will error if the minimal version of Transformers is not installed. Remove at your own risks.
check_min_version("4.18.0.dev0")
task_to_keys = {
"cola": ("sentence", None),
"mnli": ("premise", "hypothesis"),
"mrpc": ("sentence1", "sentence2"),
"qnli": ("question", "sentence"),
"qqp": ("question1", "question2"),
"rte": ("sentence1", "sentence2"),
"sst2": ("sentence", None),
"stsb": ("sentence1", "sentence2"),
"wnli": ("sentence1", "sentence2"),
}
logger = logging.getLogger(__name__)
# region Command-line arguments
@dataclass
class DataTrainingArguments:
"""
Arguments pertaining to what data we are going to input our model for training and eval.
Using `HfArgumentParser` we can turn this class
into argparse arguments to be able to specify them on
the command line.
"""
task_name: str = field(
metadata={"help": "The name of the task to train on: " + ", ".join(task_to_keys.keys())},
)
predict_file: str = field(
metadata={"help": "A file containing user-supplied examples to make predictions for"},
default=None,
)
max_seq_length: int = field(
default=128,
metadata={
"help": "The maximum total input sequence length after tokenization. Sequences longer "
"than this will be truncated, sequences shorter will be padded."
},
)
overwrite_cache: bool = field(
default=False, metadata={"help": "Overwrite the cached preprocessed datasets or not."}
)
pad_to_max_length: bool = field(
default=False,
metadata={
"help": "Whether to pad all samples to `max_seq_length`. "
"If False, will pad the samples dynamically when batching to the maximum length in the batch."
},
)
max_train_samples: Optional[int] = field(
default=None,
metadata={
"help": "For debugging purposes or quicker training, truncate the number of training examples to this "
"value if set."
},
)
max_eval_samples: Optional[int] = field(
default=None,
metadata={
"help": "For debugging purposes or quicker training, truncate the number of evaluation examples to this "
"value if set."
},
)
max_predict_samples: Optional[int] = field(
default=None,
metadata={
"help": "For debugging purposes or quicker training, truncate the number of prediction examples to this "
"value if set."
},
)
def __post_init__(self):
self.task_name = self.task_name.lower()
if self.task_name not in task_to_keys.keys():
raise ValueError("Unknown task, you should pick one in " + ",".join(task_to_keys.keys()))
@dataclass
class ModelArguments:
"""
Arguments pertaining to which model/config/tokenizer we are going to fine-tune from.
"""
model_name_or_path: str = field(
metadata={"help": "Path to pretrained model or model identifier from huggingface.co/models"}
)
config_name: Optional[str] = field(
default=None, metadata={"help": "Pretrained config name or path if not the same as model_name"}
)
tokenizer_name: Optional[str] = field(
default=None, metadata={"help": "Pretrained tokenizer name or path if not the same as model_name"}
)
cache_dir: Optional[str] = field(
default=None,
metadata={"help": "Where do you want to store the pretrained models downloaded from huggingface.co"},
)
use_fast_tokenizer: bool = field(
default=True,
metadata={"help": "Whether to use one of the fast tokenizer (backed by the tokenizers library) or not."},
)
model_revision: str = field(
default="main",
metadata={"help": "The specific model version to use (can be a branch name, tag name or commit id)."},
)
use_auth_token: bool = field(
default=False,
metadata={
"help": "Will use the token generated when running `transformers-cli login` (necessary to use this script "
"with private models)."
},
)
# endregion
def main():
# region Argument parsing
# See all possible arguments in src/transformers/training_args.py
# or by passing the --help flag to this script.
# We now keep distinct sets of args, for a cleaner separation of concerns.
parser = HfArgumentParser((ModelArguments, DataTrainingArguments, TFTrainingArguments))
if len(sys.argv) == 2 and sys.argv[1].endswith(".json"):
# If we pass only one argument to the script and it's the path to a json file,
# let's parse it to get our arguments.
model_args, data_args, training_args = parser.parse_json_file(json_file=os.path.abspath(sys.argv[1]))
else:
model_args, data_args, training_args = parser.parse_args_into_dataclasses()
if not (training_args.do_train or training_args.do_eval or training_args.do_predict):
exit("Must specify at least one of --do_train, --do_eval or --do_predict!")
# endregion
# region Checkpoints
checkpoint = None
if os.path.isdir(training_args.output_dir) and training_args.do_train and not training_args.overwrite_output_dir:
checkpoint = get_last_checkpoint(training_args.output_dir)
if checkpoint is None and len(os.listdir(training_args.output_dir)) > 0:
raise ValueError(
f"Output directory ({training_args.output_dir}) already exists and is not empty. "
"Use --overwrite_output_dir to overcome."
)
elif checkpoint is not None and training_args.resume_from_checkpoint is None:
logger.info(
f"Checkpoint detected, resuming training at {checkpoint}. To avoid this behavior, change "
"the `--output_dir` or add `--overwrite_output_dir` to train from scratch."
)
# endregion
# region Logging
logging.basicConfig(
format="%(asctime)s - %(levelname)s - %(name)s - %(message)s",
datefmt="%m/%d/%Y %H:%M:%S",
handlers=[logging.StreamHandler(sys.stdout)],
)
logger.setLevel(logging.INFO if is_main_process(training_args.local_rank) else logging.WARN)
# Set the verbosity to info of the Transformers logger (on main process only):
if is_main_process(training_args.local_rank):
transformers.utils.logging.set_verbosity_info()
transformers.utils.logging.enable_default_handler()
transformers.utils.logging.enable_explicit_format()
logger.info(f"Training/evaluation parameters {training_args}")
# endregion
# region Dataset and labels
# Set seed before initializing model.
set_seed(training_args.seed)
# Downloading and loading a dataset from the hub. In distributed training, the load_dataset function guarantee
# that only one local process can concurrently download the dataset.
datasets = load_dataset("glue", data_args.task_name, cache_dir=model_args.cache_dir)
# See more about loading any type of standard or custom dataset at
# https://huggingface.co/docs/datasets/loading_datasets.html.
is_regression = data_args.task_name == "stsb"
if not is_regression:
label_list = datasets["train"].features["label"].names
num_labels = len(label_list)
else:
num_labels = 1
if data_args.predict_file is not None:
logger.info("Preparing user-supplied file for predictions...")
data_files = {"data": data_args.predict_file}
for key in data_files.keys():
logger.info(f"Loading a local file for {key}: {data_files[key]}")
if data_args.predict_file.endswith(".csv"):
# Loading a dataset from local csv files
user_dataset = load_dataset("csv", data_files=data_files, cache_dir=model_args.cache_dir)
else:
# Loading a dataset from local json files
user_dataset = load_dataset("json", data_files=data_files, cache_dir=model_args.cache_dir)
needed_keys = task_to_keys[data_args.task_name]
for key in needed_keys:
assert key in user_dataset["data"].features, f"Your supplied predict_file is missing the {key} key!"
datasets["user_data"] = user_dataset["data"]
# endregion
# region Load model config and tokenizer
#
# In distributed training, the .from_pretrained methods guarantee that only one local process can concurrently
# download model & vocab.
config = AutoConfig.from_pretrained(
model_args.config_name if model_args.config_name else model_args.model_name_or_path,
num_labels=num_labels,
finetuning_task=data_args.task_name,
cache_dir=model_args.cache_dir,
revision=model_args.model_revision,
use_auth_token=True if model_args.use_auth_token else None,
)
tokenizer = AutoTokenizer.from_pretrained(
model_args.tokenizer_name if model_args.tokenizer_name else model_args.model_name_or_path,
cache_dir=model_args.cache_dir,
use_fast=model_args.use_fast_tokenizer,
revision=model_args.model_revision,
use_auth_token=True if model_args.use_auth_token else None,
)
# endregion
# region Dataset preprocessing
sentence1_key, sentence2_key = task_to_keys[data_args.task_name]
non_label_column_names = [name for name in datasets["train"].column_names if name != "label"]
# Padding strategy
if data_args.pad_to_max_length:
padding = "max_length"
else:
# We will pad later, dynamically at batch creation, to the max sequence length in each batch
padding = False
# Some models have set the order of the labels to use, so let's make sure we do use it.
label_to_id = None
if config.label2id != PretrainedConfig(num_labels=num_labels).label2id and not is_regression:
# Some have all caps in their config, some don't.
label_name_to_id = {k.lower(): v for k, v in config.label2id.items()}
if list(sorted(label_name_to_id.keys())) == list(sorted(label_list)):
label_to_id = {i: int(label_name_to_id[label_list[i]]) for i in range(num_labels)}
else:
logger.warning(
"Your model seems to have been trained with labels, but they don't match the dataset: ",
f"model labels: {list(sorted(label_name_to_id.keys()))}, dataset labels: {list(sorted(label_list))}."
"\nIgnoring the model labels as a result.",
)
label_to_id = {label: i for i, label in enumerate(label_list)}
if label_to_id is not None:
config.label2id = label_to_id
config.id2label = {id: label for label, id in config.label2id.items()}
elif data_args.task_name is not None and not is_regression:
config.label2id = {l: i for i, l in enumerate(label_list)}
config.id2label = {id: label for label, id in config.label2id.items()}
if data_args.max_seq_length > tokenizer.model_max_length:
logger.warning(
f"The max_seq_length passed ({data_args.max_seq_length}) is larger than the maximum length for the"
f"model ({tokenizer.model_max_length}). Using max_seq_length={tokenizer.model_max_length}."
)
max_seq_length = min(data_args.max_seq_length, tokenizer.model_max_length)
def preprocess_function(examples):
# Tokenize the texts
args = (
(examples[sentence1_key],) if sentence2_key is None else (examples[sentence1_key], examples[sentence2_key])
)
result = tokenizer(*args, padding=padding, max_length=max_seq_length, truncation=True)
return result
datasets = datasets.map(preprocess_function, batched=True, load_from_cache_file=not data_args.overwrite_cache)
if data_args.pad_to_max_length:
data_collator = DefaultDataCollator(return_tensors="tf")
else:
data_collator = DataCollatorWithPadding(tokenizer, return_tensors="tf")
# endregion
# region Metric function
metric = load_metric("glue", data_args.task_name)
def compute_metrics(preds, label_ids):
preds = preds["logits"]
preds = np.squeeze(preds) if is_regression else np.argmax(preds, axis=1)
result = metric.compute(predictions=preds, references=label_ids)
if len(result) > 1:
result["combined_score"] = np.mean(list(result.values())).item()
return result
# endregion
with training_args.strategy.scope():
# region Load pretrained model
if checkpoint is None:
model_path = model_args.model_name_or_path
else:
model_path = checkpoint
model = TFAutoModelForSequenceClassification.from_pretrained(
model_path,
config=config,
cache_dir=model_args.cache_dir,
revision=model_args.model_revision,
use_auth_token=True if model_args.use_auth_token else None,
)
# endregion
# region Optimizer, loss and compilation
optimizer = tf.keras.optimizers.Adam(
learning_rate=training_args.learning_rate,
beta_1=training_args.adam_beta1,
beta_2=training_args.adam_beta2,
epsilon=training_args.adam_epsilon,
clipnorm=training_args.max_grad_norm,
)
if is_regression:
loss_fn = tf.keras.losses.MeanSquaredError()
metrics = []
else:
loss_fn = tf.keras.losses.SparseCategoricalCrossentropy(from_logits=True)
metrics = ["accuracy"]
model.compile(optimizer=optimizer, loss=loss_fn, metrics=metrics)
# endregion
# region Convert data to a tf.data.Dataset
tf_data = dict()
max_samples = {
"train": data_args.max_train_samples,
"validation": data_args.max_eval_samples,
"validation_matched": data_args.max_eval_samples,
"validation_mismatched": data_args.max_eval_samples,
"test": data_args.max_predict_samples,
"test_matched": data_args.max_predict_samples,
"test_mismatched": data_args.max_predict_samples,
"user_data": None,
}
for key in datasets.keys():
if key == "train" or key.startswith("validation"):
assert "label" in datasets[key].features, f"Missing labels from {key} data!"
if key == "train":
shuffle = True
batch_size = training_args.per_device_train_batch_size
drop_remainder = True # Saves us worrying about scaling gradients for the last batch
else:
shuffle = False
batch_size = training_args.per_device_eval_batch_size
drop_remainder = False
samples_limit = max_samples[key]
dataset = datasets[key]
if samples_limit is not None:
dataset = dataset.select(range(samples_limit))
data = dataset.to_tf_dataset(
columns=[col for col in dataset.column_names if col not in set(non_label_column_names + ["label"])],
shuffle=shuffle,
batch_size=batch_size,
collate_fn=data_collator,
drop_remainder=drop_remainder,
# `label_cols` is needed for user-defined losses, such as in this example
label_cols="label" if "label" in dataset.column_names else None,
)
tf_data[key] = data
# endregion
# region Training and validation
if training_args.do_train:
callbacks = [SavePretrainedCallback(output_dir=training_args.output_dir)]
if training_args.do_eval and not data_args.task_name == "mnli":
# Do both evaluation and training in the Keras fit loop, unless the task is MNLI
# because MNLI has two validation sets
validation_data = tf_data["validation"]
else:
validation_data = None
model.fit(
tf_data["train"],
validation_data=validation_data,
epochs=int(training_args.num_train_epochs),
callbacks=callbacks,
)
# endregion
# region Evaluation
if training_args.do_eval:
# We normally do validation as part of the Keras fit loop, but we run it independently
# if there was no fit() step (because we didn't train the model) or if the task is MNLI,
# because MNLI has a separate validation-mismatched validation set
logger.info("*** Evaluate ***")
# Loop to handle MNLI double evaluation (matched, mis-matched)
if data_args.task_name == "mnli":
tasks = ["mnli", "mnli-mm"]
tf_datasets = [tf_data["validation_matched"], tf_data["validation_mismatched"]]
raw_datasets = [datasets["validation_matched"], datasets["validation_mismatched"]]
else:
tasks = [data_args.task_name]
tf_datasets = [tf_data["validation"]]
raw_datasets = [datasets["validation"]]
for raw_dataset, tf_dataset, task in zip(raw_datasets, tf_datasets, tasks):
eval_predictions = model.predict(tf_dataset)
eval_metrics = compute_metrics(eval_predictions, raw_dataset["label"])
print(f"Evaluation metrics ({task}):")
print(eval_metrics)
# endregion
# region Prediction
if training_args.do_predict or data_args.predict_file:
logger.info("*** Predict ***")
# Loop to handle MNLI double evaluation (matched, mis-matched)
tasks = []
tf_datasets = []
raw_datasets = []
if training_args.do_predict:
if data_args.task_name == "mnli":
tasks.extend(["mnli", "mnli-mm"])
tf_datasets.extend([tf_data["test_matched"], tf_data["test_mismatched"]])
raw_datasets.extend([datasets["test_matched"], datasets["test_mismatched"]])
else:
tasks.append(data_args.task_name)
tf_datasets.append(tf_data["test"])
raw_datasets.append(datasets["test"])
if data_args.predict_file:
tasks.append("user_data")
tf_datasets.append(tf_data["user_data"])
raw_datasets.append(datasets["user_data"])
for raw_dataset, tf_dataset, task in zip(raw_datasets, tf_datasets, tasks):
test_predictions = model.predict(tf_dataset)
if "label" in raw_dataset:
test_metrics = compute_metrics(test_predictions, raw_dataset["label"])
print(f"Test metrics ({task}):")
print(test_metrics)
if is_regression:
predictions_to_write = np.squeeze(test_predictions["logits"])
else:
predictions_to_write = np.argmax(test_predictions["logits"], axis=1)
output_predict_file = os.path.join(training_args.output_dir, f"predict_results_{task}.txt")
with open(output_predict_file, "w") as writer:
logger.info(f"***** Writing prediction results for {task} *****")
writer.write("index\tprediction\n")
for index, item in enumerate(predictions_to_write):
if is_regression:
writer.write(f"{index}\t{item:3.3f}\n")
else:
item = model.config.id2label[item]
writer.write(f"{index}\t{item}\n")
# endregion
if __name__ == "__main__":
main()
| 21,938 | 41.028736 | 119 | py |
robust-transformers | robust-transformers-main/examples/tensorflow/text-classification/run_text_classification.py | #!/usr/bin/env python
# coding=utf-8
# Copyright 2021 The HuggingFace Inc. team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
""" Fine-tuning the library models for sequence classification."""
# You can also adapt this script on your own text classification task. Pointers for this are left as comments.
import logging
import os
import sys
from dataclasses import dataclass, field
from pathlib import Path
from typing import Optional
import numpy as np
from datasets import load_dataset
from transformers import (
AutoConfig,
AutoTokenizer,
DataCollatorWithPadding,
DefaultDataCollator,
HfArgumentParser,
PretrainedConfig,
TFAutoModelForSequenceClassification,
TFTrainingArguments,
set_seed,
)
from transformers.file_utils import CONFIG_NAME, TF2_WEIGHTS_NAME
os.environ["TF_CPP_MIN_LOG_LEVEL"] = "1" # Reduce the amount of console output from TF
import tensorflow as tf # noqa: E402
logger = logging.getLogger(__name__)
# region Helper classes
class SavePretrainedCallback(tf.keras.callbacks.Callback):
# Hugging Face models have a save_pretrained() method that saves both the weights and the necessary
# metadata to allow them to be loaded as a pretrained model in future. This is a simple Keras callback
# that saves the model with this method after each epoch.
def __init__(self, output_dir, **kwargs):
super().__init__()
self.output_dir = output_dir
def on_epoch_end(self, epoch, logs=None):
self.model.save_pretrained(self.output_dir)
# endregion
# region Command-line arguments
@dataclass
class DataTrainingArguments:
"""
Arguments pertaining to what data we are going to input our model for training and eval.
Using `HfArgumentParser` we can turn this class
into argparse arguments to be able to specify them on
the command line.
"""
train_file: Optional[str] = field(
default=None, metadata={"help": "A csv or a json file containing the training data."}
)
validation_file: Optional[str] = field(
default=None, metadata={"help": "A csv or a json file containing the validation data."}
)
test_file: Optional[str] = field(default=None, metadata={"help": "A csv or a json file containing the test data."})
max_seq_length: int = field(
default=128,
metadata={
"help": "The maximum total input sequence length after tokenization. Sequences longer "
"than this will be truncated, sequences shorter will be padded."
},
)
overwrite_cache: bool = field(
default=False, metadata={"help": "Overwrite the cached preprocessed datasets or not."}
)
pad_to_max_length: bool = field(
default=False,
metadata={
"help": "Whether to pad all samples to `max_seq_length`. "
"If False, will pad the samples dynamically when batching to the maximum length in the batch."
"Data will always be padded when using TPUs."
},
)
max_train_samples: Optional[int] = field(
default=None,
metadata={
"help": "For debugging purposes or quicker training, truncate the number of training examples to this "
"value if set."
},
)
max_val_samples: Optional[int] = field(
default=None,
metadata={
"help": "For debugging purposes or quicker training, truncate the number of validation examples to this "
"value if set."
},
)
max_test_samples: Optional[int] = field(
default=None,
metadata={
"help": "For debugging purposes or quicker training, truncate the number of test examples to this "
"value if set."
},
)
def __post_init__(self):
train_extension = self.train_file.split(".")[-1].lower() if self.train_file is not None else None
validation_extension = (
self.validation_file.split(".")[-1].lower() if self.validation_file is not None else None
)
test_extension = self.test_file.split(".")[-1].lower() if self.test_file is not None else None
extensions = {train_extension, validation_extension, test_extension}
extensions.discard(None)
assert len(extensions) != 0, "Need to supply at least one of --train_file, --validation_file or --test_file!"
assert len(extensions) == 1, "All input files should have the same file extension, either csv or json!"
assert "csv" in extensions or "json" in extensions, "Input files should have either .csv or .json extensions!"
self.input_file_extension = extensions.pop()
@dataclass
class ModelArguments:
"""
Arguments pertaining to which model/config/tokenizer we are going to fine-tune from.
"""
model_name_or_path: str = field(
metadata={"help": "Path to pretrained model or model identifier from huggingface.co/models"}
)
config_name: Optional[str] = field(
default=None, metadata={"help": "Pretrained config name or path if not the same as model_name"}
)
tokenizer_name: Optional[str] = field(
default=None, metadata={"help": "Pretrained tokenizer name or path if not the same as model_name"}
)
cache_dir: Optional[str] = field(
default=None,
metadata={"help": "Where do you want to store the pretrained models downloaded from huggingface.co"},
)
model_revision: str = field(
default="main",
metadata={"help": "The specific model version to use (can be a branch name, tag name or commit id)."},
)
use_auth_token: bool = field(
default=False,
metadata={
"help": "Will use the token generated when running `transformers-cli login` (necessary to use this script "
"with private models)."
},
)
# endregion
def main():
# region Argument parsing
# See all possible arguments in src/transformers/training_args.py
# or by passing the --help flag to this script.
# We now keep distinct sets of args, for a cleaner separation of concerns.
parser = HfArgumentParser((ModelArguments, DataTrainingArguments, TFTrainingArguments))
if len(sys.argv) == 2 and sys.argv[1].endswith(".json"):
# If we pass only one argument to the script and it's the path to a json file,
# let's parse it to get our arguments.
model_args, data_args, training_args = parser.parse_json_file(json_file=os.path.abspath(sys.argv[1]))
else:
model_args, data_args, training_args = parser.parse_args_into_dataclasses()
output_dir = Path(training_args.output_dir)
output_dir.mkdir(parents=True, exist_ok=True)
# endregion
# region Checkpoints
# Detecting last checkpoint.
checkpoint = None
if len(os.listdir(training_args.output_dir)) > 0 and not training_args.overwrite_output_dir:
if (output_dir / CONFIG_NAME).is_file() and (output_dir / TF2_WEIGHTS_NAME).is_file():
checkpoint = output_dir
logger.info(
f"Checkpoint detected, resuming training from checkpoint in {training_args.output_dir}. To avoid this"
" behavior, change the `--output_dir` or add `--overwrite_output_dir` to train from scratch."
)
else:
raise ValueError(
f"Output directory ({training_args.output_dir}) already exists and is not empty. "
"Use --overwrite_output_dir to continue regardless."
)
# endregion
# region Logging
logging.basicConfig(
format="%(asctime)s - %(levelname)s - %(name)s - %(message)s",
datefmt="%m/%d/%Y %H:%M:%S",
handlers=[logging.StreamHandler(sys.stdout)],
)
logger.setLevel(logging.INFO)
logger.info(f"Training/evaluation parameters {training_args}")
# endregion
# region Loading data
# For CSV/JSON files, this script will use the 'label' field as the label and the 'sentence1' and optionally
# 'sentence2' fields as inputs if they exist. If not, the first two fields not named label are used if at least two
# columns are provided. Note that the term 'sentence' can be slightly misleading, as they often contain more than
# a single grammatical sentence, when the task requires it.
#
# If the CSVs/JSONs contain only one non-label column, the script does single sentence classification on this
# single column. You can easily tweak this behavior (see below)
#
# In distributed training, the load_dataset function guarantee that only one local process can concurrently
# download the dataset.
data_files = {"train": data_args.train_file, "validation": data_args.validation_file, "test": data_args.test_file}
data_files = {key: file for key, file in data_files.items() if file is not None}
for key in data_files.keys():
logger.info(f"Loading a local file for {key}: {data_files[key]}")
if data_args.input_file_extension == "csv":
# Loading a dataset from local csv files
datasets = load_dataset("csv", data_files=data_files, cache_dir=model_args.cache_dir)
else:
# Loading a dataset from local json files
datasets = load_dataset("json", data_files=data_files, cache_dir=model_args.cache_dir)
# See more about loading any type of standard or custom dataset at
# https://huggingface.co/docs/datasets/loading_datasets.html.
# endregion
# region Label preprocessing
# If you've passed us a training set, we try to infer your labels from it
if "train" in datasets:
# By default we assume that if your label column looks like a float then you're doing regression,
# and if not then you're doing classification. This is something you may want to change!
is_regression = datasets["train"].features["label"].dtype in ["float32", "float64"]
if is_regression:
num_labels = 1
else:
# A useful fast method:
# https://huggingface.co/docs/datasets/package_reference/main_classes.html#datasets.Dataset.unique
label_list = datasets["train"].unique("label")
label_list.sort() # Let's sort it for determinism
num_labels = len(label_list)
# If you haven't passed a training set, we read label info from the saved model (this happens later)
else:
num_labels = None
label_list = None
is_regression = None
# endregion
# region Load model config and tokenizer
if checkpoint is not None:
config_path = training_args.output_dir
elif model_args.config_name:
config_path = model_args.config_name
else:
config_path = model_args.model_name_or_path
if num_labels is not None:
config = AutoConfig.from_pretrained(
config_path,
num_labels=num_labels,
cache_dir=model_args.cache_dir,
revision=model_args.model_revision,
use_auth_token=True if model_args.use_auth_token else None,
)
else:
config = AutoConfig.from_pretrained(
config_path,
cache_dir=model_args.cache_dir,
revision=model_args.model_revision,
use_auth_token=True if model_args.use_auth_token else None,
)
tokenizer = AutoTokenizer.from_pretrained(
model_args.tokenizer_name if model_args.tokenizer_name else model_args.model_name_or_path,
cache_dir=model_args.cache_dir,
revision=model_args.model_revision,
use_auth_token=True if model_args.use_auth_token else None,
)
# endregion
# region Dataset preprocessing
# Again, we try to have some nice defaults but don't hesitate to tweak to your use case.
column_names = {col for cols in datasets.column_names.values() for col in cols}
non_label_column_names = [name for name in column_names if name != "label"]
if "sentence1" in non_label_column_names and "sentence2" in non_label_column_names:
sentence1_key, sentence2_key = "sentence1", "sentence2"
elif "sentence1" in non_label_column_names:
sentence1_key, sentence2_key = "sentence1", None
else:
if len(non_label_column_names) >= 2:
sentence1_key, sentence2_key = non_label_column_names[:2]
else:
sentence1_key, sentence2_key = non_label_column_names[0], None
if data_args.max_seq_length > tokenizer.model_max_length:
logger.warning(
f"The max_seq_length passed ({data_args.max_seq_length}) is larger than the maximum length for the"
f"model ({tokenizer.model_max_length}). Using max_seq_length={tokenizer.model_max_length}."
)
max_seq_length = min(data_args.max_seq_length, tokenizer.model_max_length)
# Ensure that our labels match the model's, if it has some pre-specified
if "train" in datasets:
if not is_regression and config.label2id != PretrainedConfig(num_labels=num_labels).label2id:
label_name_to_id = config.label2id
if list(sorted(label_name_to_id.keys())) == list(sorted(label_list)):
label_to_id = label_name_to_id # Use the model's labels
else:
logger.warning(
"Your model seems to have been trained with labels, but they don't match the dataset: ",
f"model labels: {list(sorted(label_name_to_id.keys()))}, dataset labels: {list(sorted(label_list))}."
"\nIgnoring the model labels as a result.",
)
label_to_id = {v: i for i, v in enumerate(label_list)}
elif not is_regression:
label_to_id = {v: i for i, v in enumerate(label_list)}
else:
label_to_id = None
# Now we've established our label2id, let's overwrite the model config with it.
config.label2id = label_to_id
if config.label2id is not None:
config.id2label = {id: label for label, id in label_to_id.items()}
else:
config.id2label = None
else:
label_to_id = config.label2id # Just load the data from the model
if "validation" in datasets and config.label2id is not None:
validation_label_list = datasets["validation"].unique("label")
for val_label in validation_label_list:
assert val_label in label_to_id, f"Label {val_label} is in the validation set but not the training set!"
def preprocess_function(examples):
# Tokenize the texts
args = (
(examples[sentence1_key],) if sentence2_key is None else (examples[sentence1_key], examples[sentence2_key])
)
result = tokenizer(*args, max_length=max_seq_length, truncation=True)
# Map labels to IDs
if config.label2id is not None and "label" in examples:
result["label"] = [(config.label2id[l] if l != -1 else -1) for l in examples["label"]]
return result
datasets = datasets.map(preprocess_function, batched=True, load_from_cache_file=not data_args.overwrite_cache)
if data_args.pad_to_max_length:
data_collator = DefaultDataCollator(return_tensors="tf")
else:
data_collator = DataCollatorWithPadding(tokenizer, return_tensors="tf")
# endregion
with training_args.strategy.scope():
# region Load pretrained model
# Set seed before initializing model
set_seed(training_args.seed)
#
# In distributed training, the .from_pretrained methods guarantee that only one local process can concurrently
# download model & vocab.
if checkpoint is None:
model_path = model_args.model_name_or_path
else:
model_path = checkpoint
model = TFAutoModelForSequenceClassification.from_pretrained(
model_path,
config=config,
cache_dir=model_args.cache_dir,
revision=model_args.model_revision,
use_auth_token=True if model_args.use_auth_token else None,
)
# endregion
# region Optimizer, loss and compilation
optimizer = tf.keras.optimizers.Adam(
learning_rate=training_args.learning_rate,
beta_1=training_args.adam_beta1,
beta_2=training_args.adam_beta2,
epsilon=training_args.adam_epsilon,
clipnorm=training_args.max_grad_norm,
)
if is_regression:
loss_fn = tf.keras.losses.MeanSquaredError()
metrics = []
else:
loss_fn = tf.keras.losses.SparseCategoricalCrossentropy(from_logits=True)
metrics = ["accuracy"]
model.compile(optimizer=optimizer, loss=loss_fn, metrics=metrics)
# endregion
# region Convert data to a tf.data.Dataset
tf_data = dict()
max_samples = {
"train": data_args.max_train_samples,
"validation": data_args.max_val_samples,
"test": data_args.max_test_samples,
}
for key in ("train", "validation", "test"):
if key not in datasets:
tf_data[key] = None
continue
if key in ("train", "validation"):
assert "label" in datasets[key].features, f"Missing labels from {key} data!"
if key == "train":
shuffle = True
batch_size = training_args.per_device_train_batch_size
drop_remainder = True # Saves us worrying about scaling gradients for the last batch
else:
shuffle = False
batch_size = training_args.per_device_eval_batch_size
drop_remainder = False
samples_limit = max_samples[key]
dataset = datasets[key]
if samples_limit is not None:
dataset = dataset.select(range(samples_limit))
data = dataset.to_tf_dataset(
columns=[col for col in dataset.column_names if col not in set(non_label_column_names + ["label"])],
shuffle=shuffle,
batch_size=batch_size,
collate_fn=data_collator,
drop_remainder=drop_remainder,
# `label_cols` is needed for user-defined losses, such as in this example
label_cols="label" if "label" in dataset.column_names else None,
)
tf_data[key] = data
# endregion
# region Training and validation
if tf_data["train"] is not None:
callbacks = [SavePretrainedCallback(output_dir=training_args.output_dir)]
model.fit(
tf_data["train"],
validation_data=tf_data["validation"],
epochs=int(training_args.num_train_epochs),
callbacks=callbacks,
)
elif tf_data["validation"] is not None:
# If there's a validation dataset but no training set, just evaluate the metrics
logger.info("Computing metrics on validation data...")
if is_regression:
loss = model.evaluate(tf_data["validation"])
logger.info(f"Loss: {loss:.5f}")
else:
loss, accuracy = model.evaluate(tf_data["validation"])
logger.info(f"Loss: {loss:.5f}, Accuracy: {accuracy * 100:.4f}%")
# endregion
# region Prediction
if tf_data["test"] is not None:
logger.info("Doing predictions on test dataset...")
predictions = model.predict(tf_data["test"])["logits"]
predicted_class = np.squeeze(predictions) if is_regression else np.argmax(predictions, axis=1)
output_test_file = os.path.join(training_args.output_dir, "test_results.txt")
with open(output_test_file, "w") as writer:
writer.write("index\tprediction\n")
for index, item in enumerate(predicted_class):
if is_regression:
writer.write(f"{index}\t{item:3.3f}\n")
else:
item = config.id2label[item]
writer.write(f"{index}\t{item}\n")
logger.info(f"Wrote predictions to {output_test_file}!")
# endregion
# region Prediction losses
# This section is outside the scope() because it's very quick to compute, but behaves badly inside it
if "test" in datasets and "label" in datasets["test"].features:
print("Computing prediction loss on test labels...")
labels = datasets["test"]["label"]
loss = float(loss_fn(labels, predictions).numpy())
print(f"Test loss: {loss:.4f}")
# endregion
if __name__ == "__main__":
main()
| 21,233 | 41.983806 | 121 | py |
robust-transformers | robust-transformers-main/examples/tensorflow/multiple-choice/run_swag.py | #!/usr/bin/env python
# coding=utf-8
# Copyright The HuggingFace Team and The HuggingFace Inc. team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
"""
Fine-tuning the library models for multiple choice.
"""
# You can also adapt this script on your own multiple choice task. Pointers for this are left as comments.
import logging
import os
import sys
from dataclasses import dataclass, field
from itertools import chain
from pathlib import Path
from typing import Optional, Union
import datasets
import tensorflow as tf
from datasets import load_dataset
import transformers
from transformers import (
CONFIG_NAME,
TF2_WEIGHTS_NAME,
AutoConfig,
AutoTokenizer,
DefaultDataCollator,
HfArgumentParser,
TFAutoModelForMultipleChoice,
TFTrainingArguments,
create_optimizer,
set_seed,
)
from transformers.file_utils import PaddingStrategy
from transformers.tokenization_utils_base import PreTrainedTokenizerBase
from transformers.utils import check_min_version
# Will error if the minimal version of Transformers is not installed. Remove at your own risks.
check_min_version("4.18.0.dev0")
logger = logging.getLogger(__name__)
# region Helper classes and functions
class SavePretrainedCallback(tf.keras.callbacks.Callback):
# Hugging Face models have a save_pretrained() method that saves both the weights and the necessary
# metadata to allow them to be loaded as a pretrained model in future. This is a simple Keras callback
# that saves the model with this method after each epoch.
def __init__(self, output_dir, **kwargs):
super().__init__()
self.output_dir = output_dir
def on_epoch_end(self, epoch, logs=None):
self.model.save_pretrained(self.output_dir)
@dataclass
class DataCollatorForMultipleChoice:
"""
Data collator that will dynamically pad the inputs for multiple choice received.
Args:
tokenizer ([`PreTrainedTokenizer`] or [`PreTrainedTokenizerFast`]):
The tokenizer used for encoding the data.
padding (`bool`, `str` or [`~file_utils.PaddingStrategy`], *optional*, defaults to `True`):
Select a strategy to pad the returned sequences (according to the model's padding side and padding index)
among:
- `True` or `'longest'`: Pad to the longest sequence in the batch (or no padding if only a single sequence
if provided).
- `'max_length'`: Pad to a maximum length specified with the argument `max_length` or to the maximum
acceptable input length for the model if that argument is not provided.
- `False` or `'do_not_pad'` (default): No padding (i.e., can output a batch with sequences of different
lengths).
max_length (`int`, *optional*):
Maximum length of the returned list and optionally padding length (see above).
pad_to_multiple_of (`int`, *optional*):
If set will pad the sequence to a multiple of the provided value.
This is especially useful to enable the use of Tensor Cores on NVIDIA hardware with compute capability >=
7.5 (Volta).
"""
tokenizer: PreTrainedTokenizerBase
padding: Union[bool, str, PaddingStrategy] = True
max_length: Optional[int] = None
pad_to_multiple_of: Optional[int] = None
def __call__(self, features):
label_name = "label" if "label" in features[0].keys() else "labels"
labels = [feature.pop(label_name) for feature in features]
batch_size = len(features)
num_choices = len(features[0]["input_ids"])
flattened_features = [
[{k: v[i] for k, v in feature.items()} for i in range(num_choices)] for feature in features
]
flattened_features = list(chain(*flattened_features))
batch = self.tokenizer.pad(
flattened_features,
padding=self.padding,
max_length=self.max_length,
pad_to_multiple_of=self.pad_to_multiple_of,
return_tensors="tf",
)
# Un-flatten
batch = {k: tf.reshape(v, (batch_size, num_choices, -1)) for k, v in batch.items()}
# Add back labels
batch["labels"] = tf.convert_to_tensor(labels, dtype=tf.int64)
return batch
# endregion
# region Arguments
@dataclass
class ModelArguments:
"""
Arguments pertaining to which model/config/tokenizer we are going to fine-tune from.
"""
model_name_or_path: str = field(
metadata={"help": "Path to pretrained model or model identifier from huggingface.co/models"}
)
config_name: Optional[str] = field(
default=None, metadata={"help": "Pretrained config name or path if not the same as model_name"}
)
tokenizer_name: Optional[str] = field(
default=None, metadata={"help": "Pretrained tokenizer name or path if not the same as model_name"}
)
cache_dir: Optional[str] = field(
default=None,
metadata={"help": "Where do you want to store the pretrained models downloaded from huggingface.co"},
)
use_fast_tokenizer: bool = field(
default=True,
metadata={"help": "Whether to use one of the fast tokenizer (backed by the tokenizers library) or not."},
)
model_revision: str = field(
default="main",
metadata={"help": "The specific model version to use (can be a branch name, tag name or commit id)."},
)
use_auth_token: bool = field(
default=False,
metadata={
"help": "Will use the token generated when running `transformers-cli login` (necessary to use this script "
"with private models)."
},
)
@dataclass
class DataTrainingArguments:
"""
Arguments pertaining to what data we are going to input our model for training and eval.
"""
train_file: Optional[str] = field(default=None, metadata={"help": "The input training data file (a text file)."})
validation_file: Optional[str] = field(
default=None,
metadata={"help": "An optional input evaluation data file to evaluate the perplexity on (a text file)."},
)
overwrite_cache: bool = field(
default=False, metadata={"help": "Overwrite the cached training and evaluation sets"}
)
preprocessing_num_workers: Optional[int] = field(
default=None,
metadata={"help": "The number of processes to use for the preprocessing."},
)
max_seq_length: Optional[int] = field(
default=None,
metadata={
"help": "The maximum total input sequence length after tokenization. If passed, sequences longer "
"than this will be truncated, sequences shorter will be padded."
},
)
pad_to_max_length: bool = field(
default=False,
metadata={
"help": "Whether to pad all samples to the maximum sentence length. "
"If False, will pad the samples dynamically when batching to the maximum length in the batch. More "
"efficient on GPU but very bad for TPU."
},
)
max_train_samples: Optional[int] = field(
default=None,
metadata={
"help": "For debugging purposes or quicker training, truncate the number of training examples to this "
"value if set."
},
)
max_eval_samples: Optional[int] = field(
default=None,
metadata={
"help": "For debugging purposes or quicker training, truncate the number of evaluation examples to this "
"value if set."
},
)
def __post_init__(self):
if self.train_file is not None:
extension = self.train_file.split(".")[-1]
assert extension in ["csv", "json"], "`train_file` should be a csv or a json file."
if self.validation_file is not None:
extension = self.validation_file.split(".")[-1]
assert extension in ["csv", "json"], "`validation_file` should be a csv or a json file."
# endregion
def main():
# region Argument parsing
# See all possible arguments in src/transformers/training_args.py
# or by passing the --help flag to this script.
# We now keep distinct sets of args, for a cleaner separation of concerns.
parser = HfArgumentParser((ModelArguments, DataTrainingArguments, TFTrainingArguments))
if len(sys.argv) == 2 and sys.argv[1].endswith(".json"):
# If we pass only one argument to the script and it's the path to a json file,
# let's parse it to get our arguments.
model_args, data_args, training_args = parser.parse_json_file(json_file=os.path.abspath(sys.argv[1]))
else:
model_args, data_args, training_args = parser.parse_args_into_dataclasses()
output_dir = Path(training_args.output_dir)
output_dir.mkdir(parents=True, exist_ok=True)
# endregion
# region Logging
logging.basicConfig(
format="%(asctime)s - %(levelname)s - %(name)s - %(message)s",
datefmt="%m/%d/%Y %H:%M:%S",
handlers=[logging.StreamHandler(sys.stdout)],
)
log_level = training_args.get_process_log_level()
logger.setLevel(log_level)
datasets.utils.logging.set_verbosity(log_level)
transformers.utils.logging.set_verbosity(log_level)
transformers.utils.logging.enable_default_handler()
transformers.utils.logging.enable_explicit_format()
# endregion
# region Checkpoints
checkpoint = None
if len(os.listdir(training_args.output_dir)) > 0 and not training_args.overwrite_output_dir:
if (output_dir / CONFIG_NAME).is_file() and (output_dir / TF2_WEIGHTS_NAME).is_file():
checkpoint = output_dir
logger.info(
f"Checkpoint detected, resuming training from checkpoint in {training_args.output_dir}. To avoid this"
" behavior, change the `--output_dir` or add `--overwrite_output_dir` to train from scratch."
)
else:
raise ValueError(
f"Output directory ({training_args.output_dir}) already exists and is not empty. "
"Use --overwrite_output_dir to continue regardless."
)
# endregion
# Set seed before initializing model.
set_seed(training_args.seed)
# region Load datasets
# Get the datasets: you can either provide your own CSV/JSON/TXT training and evaluation files (see below)
# or just provide the name of one of the public datasets available on the hub at https://huggingface.co/datasets/
# (the dataset will be downloaded automatically from the datasets Hub).
# For CSV/JSON files, this script will use the column called 'text' or the first column if no column called
# 'text' is found. You can easily tweak this behavior (see below).
# In distributed training, the load_dataset function guarantee that only one local process can concurrently
# download the dataset.
if data_args.train_file is not None or data_args.validation_file is not None:
data_files = {}
if data_args.train_file is not None:
data_files["train"] = data_args.train_file
if data_args.validation_file is not None:
data_files["validation"] = data_args.validation_file
extension = data_args.train_file.split(".")[-1]
raw_datasets = load_dataset(extension, data_files=data_files, cache_dir=model_args.cache_dir)
else:
# Downloading and loading the swag dataset from the hub.
raw_datasets = load_dataset("swag", "regular", cache_dir=model_args.cache_dir)
# See more about loading any type of standard or custom dataset (from files, python dict, pandas DataFrame, etc) at
# https://huggingface.co/docs/datasets/loading_datasets.html.
# When using your own dataset or a different dataset from swag, you will probably need to change this.
ending_names = [f"ending{i}" for i in range(4)]
context_name = "sent1"
question_header_name = "sent2"
# endregion
# region Load model config and tokenizer
if checkpoint is not None:
config_path = training_args.output_dir
elif model_args.config_name:
config_path = model_args.config_name
else:
config_path = model_args.model_name_or_path
# Distributed training:
# The .from_pretrained methods guarantee that only one local process can concurrently
# download model & vocab.
config = AutoConfig.from_pretrained(
config_path,
cache_dir=model_args.cache_dir,
revision=model_args.model_revision,
use_auth_token=True if model_args.use_auth_token else None,
)
tokenizer = AutoTokenizer.from_pretrained(
model_args.tokenizer_name if model_args.tokenizer_name else model_args.model_name_or_path,
cache_dir=model_args.cache_dir,
use_fast=model_args.use_fast_tokenizer,
revision=model_args.model_revision,
use_auth_token=True if model_args.use_auth_token else None,
)
# endregion
# region Dataset preprocessing
if data_args.max_seq_length is None:
max_seq_length = tokenizer.model_max_length
if max_seq_length > 1024:
logger.warning(
f"The tokenizer picked seems to have a very large `model_max_length` ({tokenizer.model_max_length}). "
"Picking 1024 instead. You can change that default value by passing --max_seq_length xxx."
)
max_seq_length = 1024
else:
if data_args.max_seq_length > tokenizer.model_max_length:
logger.warning(
f"The max_seq_length passed ({data_args.max_seq_length}) is larger than the maximum length for the"
f"model ({tokenizer.model_max_length}). Using max_seq_length={tokenizer.model_max_length}."
)
max_seq_length = min(data_args.max_seq_length, tokenizer.model_max_length)
def preprocess_function(examples):
first_sentences = [[context] * 4 for context in examples[context_name]]
question_headers = examples[question_header_name]
second_sentences = [
[f"{header} {examples[end][i]}" for end in ending_names] for i, header in enumerate(question_headers)
]
# Flatten out
first_sentences = list(chain(*first_sentences))
second_sentences = list(chain(*second_sentences))
# Tokenize
tokenized_examples = tokenizer(first_sentences, second_sentences, truncation=True, max_length=max_seq_length)
# Un-flatten
data = {k: [v[i : i + 4] for i in range(0, len(v), 4)] for k, v in tokenized_examples.items()}
return data
if training_args.do_train:
if "train" not in raw_datasets:
raise ValueError("--do_train requires a train dataset")
train_dataset = raw_datasets["train"]
non_label_columns = [feature for feature in train_dataset.features if feature not in ("label", "labels")]
if data_args.max_train_samples is not None:
train_dataset = train_dataset.select(range(data_args.max_train_samples))
with training_args.main_process_first(desc="train dataset map pre-processing"):
train_dataset = train_dataset.map(
preprocess_function,
batched=True,
num_proc=data_args.preprocessing_num_workers,
load_from_cache_file=not data_args.overwrite_cache,
)
if training_args.do_eval:
if "validation" not in raw_datasets:
raise ValueError("--do_eval requires a validation dataset")
eval_dataset = raw_datasets["validation"]
if not training_args.do_train:
non_label_columns = [feature for feature in eval_dataset.features if feature not in ("label", "labels")]
if data_args.max_eval_samples is not None:
eval_dataset = eval_dataset.select(range(data_args.max_eval_samples))
with training_args.main_process_first(desc="validation dataset map pre-processing"):
eval_dataset = eval_dataset.map(
preprocess_function,
batched=True,
num_proc=data_args.preprocessing_num_workers,
load_from_cache_file=not data_args.overwrite_cache,
)
if data_args.pad_to_max_length:
data_collator = DefaultDataCollator(return_tensors="tf")
else:
# custom class defined above, as HF has no data collator for multiple choice
data_collator = DataCollatorForMultipleChoice(tokenizer)
# endregion
with training_args.strategy.scope():
# region Build model
if checkpoint is None:
model_path = model_args.model_name_or_path
else:
model_path = checkpoint
model = TFAutoModelForMultipleChoice.from_pretrained(
model_path,
config=config,
cache_dir=model_args.cache_dir,
revision=model_args.model_revision,
use_auth_token=True if model_args.use_auth_token else None,
)
num_replicas = training_args.strategy.num_replicas_in_sync
total_train_batch_size = training_args.per_device_train_batch_size * num_replicas
total_eval_batch_size = training_args.per_device_eval_batch_size * num_replicas
if training_args.do_train:
total_train_steps = (len(train_dataset) // total_train_batch_size) * int(training_args.num_train_epochs)
optimizer, lr_schedule = create_optimizer(
init_lr=training_args.learning_rate, num_train_steps=int(total_train_steps), num_warmup_steps=0
)
else:
optimizer = "adam" # Just put anything in here, since we're not using it anyway
model.compile(
optimizer=optimizer,
loss=tf.keras.losses.SparseCategoricalCrossentropy(from_logits=True),
metrics=[tf.keras.metrics.SparseCategoricalAccuracy(name="accuracy")],
)
# endregion
# region Training
if training_args.do_train:
dataset_exclude_cols = set(non_label_columns + ["label"])
tf_train_dataset = train_dataset.to_tf_dataset(
columns=[col for col in train_dataset.column_names if col not in dataset_exclude_cols],
shuffle=True,
batch_size=total_train_batch_size,
collate_fn=data_collator,
drop_remainder=True,
# `label_cols` is needed for user-defined losses, such as in this example
label_cols="label" if "label" in train_dataset.column_names else None,
)
if training_args.do_eval:
validation_data = eval_dataset.to_tf_dataset(
columns=[col for col in eval_dataset.column_names if col not in dataset_exclude_cols],
shuffle=False,
batch_size=total_eval_batch_size,
collate_fn=data_collator,
drop_remainder=True,
# `label_cols` is needed for user-defined losses, such as in this example
label_cols="label" if "label" in eval_dataset.column_names else None,
)
else:
validation_data = None
model.fit(
tf_train_dataset,
validation_data=validation_data,
epochs=int(training_args.num_train_epochs),
callbacks=[SavePretrainedCallback(output_dir=training_args.output_dir)],
)
# endregion
# region Evaluation
if training_args.do_eval and not training_args.do_train:
dataset_exclude_cols = set(non_label_columns + ["label"])
# Do a standalone evaluation pass
tf_eval_dataset = eval_dataset.to_tf_dataset(
columns=[col for col in eval_dataset.column_names if col not in dataset_exclude_cols],
shuffle=False,
batch_size=total_eval_batch_size,
collate_fn=data_collator,
drop_remainder=True,
# `label_cols` is needed for user-defined losses, such as in this example
label_cols="label" if "label" in eval_dataset.column_names else None,
)
model.evaluate(tf_eval_dataset)
# endregion
# region Push to hub
if training_args.push_to_hub:
model.push_to_hub(
finetuned_from=model_args.model_name_or_path,
tasks="multiple-choice",
dataset_tags="swag",
dataset_args="regular",
dataset="SWAG",
language="en",
)
# endregion
if __name__ == "__main__":
main()
| 21,257 | 41.516 | 119 | py |
robust-transformers | robust-transformers-main/examples/tensorflow/translation/run_translation.py | #!/usr/bin/env python
# coding=utf-8
# Copyright 2021 The HuggingFace Team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
"""
Fine-tuning the library models for translation.
"""
# You can also adapt this script on your own sequence to sequence task. Pointers for this are left as comments.
import logging
import os
import sys
from dataclasses import dataclass, field
from functools import partial
from typing import Optional
import datasets
import numpy as np
import tensorflow as tf
from datasets import load_dataset, load_metric
from tqdm import tqdm
import transformers
from transformers import (
AutoConfig,
AutoTokenizer,
HfArgumentParser,
M2M100Tokenizer,
MBart50Tokenizer,
MBart50TokenizerFast,
MBartTokenizer,
MBartTokenizerFast,
TFAutoModelForSeq2SeqLM,
TFTrainingArguments,
create_optimizer,
set_seed,
)
from transformers.trainer_utils import get_last_checkpoint
from transformers.utils import check_min_version
from transformers.utils.versions import require_version
# region Dependencies and constants
# Will error if the minimal version of Transformers is not installed. Remove at your own risks.
check_min_version("4.18.0.dev0")
require_version("datasets>=1.8.0", "To fix: pip install -r examples/pytorch/summarization/requirements.txt")
logger = logging.getLogger(__name__)
MULTILINGUAL_TOKENIZERS = [MBartTokenizer, MBartTokenizerFast, MBart50Tokenizer, MBart50TokenizerFast, M2M100Tokenizer]
# endregion
# region Arguments
@dataclass
class ModelArguments:
"""
Arguments pertaining to which model/config/tokenizer we are going to fine-tune from.
"""
model_name_or_path: str = field(
metadata={"help": "Path to pretrained model or model identifier from huggingface.co/models"}
)
config_name: Optional[str] = field(
default=None, metadata={"help": "Pretrained config name or path if not the same as model_name"}
)
tokenizer_name: Optional[str] = field(
default=None, metadata={"help": "Pretrained tokenizer name or path if not the same as model_name"}
)
cache_dir: Optional[str] = field(
default=None,
metadata={"help": "Where to store the pretrained models downloaded from huggingface.co"},
)
use_fast_tokenizer: bool = field(
default=True,
metadata={"help": "Whether to use one of the fast tokenizer (backed by the tokenizers library) or not."},
)
model_revision: str = field(
default="main",
metadata={"help": "The specific model version to use (can be a branch name, tag name or commit id)."},
)
use_auth_token: bool = field(
default=False,
metadata={
"help": "Will use the token generated when running `transformers-cli login` (necessary to use this script "
"with private models)."
},
)
@dataclass
class DataTrainingArguments:
"""
Arguments pertaining to what data we are going to input our model for training and eval.
"""
source_lang: str = field(default=None, metadata={"help": "Source language id for translation."})
target_lang: str = field(default=None, metadata={"help": "Target language id for translation."})
dataset_name: Optional[str] = field(
default=None, metadata={"help": "The name of the dataset to use (via the datasets library)."}
)
dataset_config_name: Optional[str] = field(
default=None, metadata={"help": "The configuration name of the dataset to use (via the datasets library)."}
)
train_file: Optional[str] = field(
default=None, metadata={"help": "The input training data file (a jsonlines or csv file)."}
)
validation_file: Optional[str] = field(
default=None,
metadata={
"help": "An optional input evaluation data file to evaluate the metrics (rouge) on "
"(a jsonlines or csv file)."
},
)
test_file: Optional[str] = field(
default=None,
metadata={
"help": "An optional input test data file to evaluate the metrics (rouge) on " "(a jsonlines or csv file)."
},
)
overwrite_cache: bool = field(
default=False, metadata={"help": "Overwrite the cached training and evaluation sets"}
)
preprocessing_num_workers: Optional[int] = field(
default=None,
metadata={"help": "The number of processes to use for the preprocessing."},
)
max_source_length: Optional[int] = field(
default=1024,
metadata={
"help": "The maximum total input sequence length after tokenization. Sequences longer "
"than this will be truncated, sequences shorter will be padded."
},
)
max_target_length: Optional[int] = field(
default=128,
metadata={
"help": "The maximum total sequence length for target text after tokenization. Sequences longer "
"than this will be truncated, sequences shorter will be padded."
},
)
val_max_target_length: Optional[int] = field(
default=None,
metadata={
"help": "The maximum total sequence length for validation target text after tokenization. Sequences longer "
"than this will be truncated, sequences shorter will be padded. Will default to `max_target_length`."
"This argument is also used to override the ``max_length`` param of ``model.generate``, which is used "
"during ``evaluate`` and ``predict``."
},
)
pad_to_max_length: bool = field(
default=False,
metadata={
"help": "Whether to pad all samples to model maximum sentence length. "
"If False, will pad the samples dynamically when batching to the maximum length in the batch. More "
"efficient on GPU but very bad for TPU."
},
)
max_train_samples: Optional[int] = field(
default=None,
metadata={
"help": "For debugging purposes or quicker training, truncate the number of training examples to this "
"value if set."
},
)
max_eval_samples: Optional[int] = field(
default=None,
metadata={
"help": "For debugging purposes or quicker training, truncate the number of evaluation examples to this "
"value if set."
},
)
max_predict_samples: Optional[int] = field(
default=None,
metadata={
"help": "For debugging purposes or quicker training, truncate the number of prediction examples to this "
"value if set."
},
)
num_beams: Optional[int] = field(
default=None,
metadata={
"help": "Number of beams to use for evaluation. This argument will be passed to ``model.generate``, "
"which is used during ``evaluate`` and ``predict``."
},
)
ignore_pad_token_for_loss: bool = field(
default=True,
metadata={
"help": "Whether to ignore the tokens corresponding to padded labels in the loss computation or not."
},
)
source_prefix: Optional[str] = field(
default=None, metadata={"help": "A prefix to add before every source text (useful for T5 models)."}
)
def __post_init__(self):
if self.dataset_name is None and self.train_file is None and self.validation_file is None:
raise ValueError("Need either a dataset name or a training/validation file.")
else:
if self.train_file is not None:
extension = self.train_file.split(".")[-1]
assert extension in ["csv", "json"], "`train_file` should be a csv or a json file."
if self.validation_file is not None:
extension = self.validation_file.split(".")[-1]
assert extension in ["csv", "json"], "`validation_file` should be a csv or a json file."
if self.val_max_target_length is None:
self.val_max_target_length = self.max_target_length
# endregion
# region Data generator
def sample_generator(dataset, model, tokenizer, shuffle, pad_to_multiple_of=None):
if shuffle:
sample_ordering = np.random.permutation(len(dataset))
else:
sample_ordering = np.arange(len(dataset))
for sample_idx in sample_ordering:
example = dataset[int(sample_idx)]
# Handle dicts with proper padding and conversion to tensor.
example = tokenizer.pad(example, return_tensors="np", pad_to_multiple_of=pad_to_multiple_of)
example = {key: tf.convert_to_tensor(arr, dtype_hint=tf.int32) for key, arr in example.items()}
if model is not None and hasattr(model, "prepare_decoder_input_ids_from_labels"):
decoder_input_ids = model.prepare_decoder_input_ids_from_labels(
labels=tf.expand_dims(example["labels"], 0)
)
example["decoder_input_ids"] = tf.squeeze(decoder_input_ids, 0)
yield example, example["labels"] # TF needs some kind of labels, even if we don't use them
return
# endregion
# region Helper functions
def dataset_to_tf(dataset, model, tokenizer, total_batch_size, num_epochs, shuffle):
if dataset is None:
return None
train_generator = partial(sample_generator, dataset, model, tokenizer, shuffle=shuffle)
train_signature = {
feature: tf.TensorSpec(shape=(None,), dtype=tf.int32)
for feature in dataset.features
if feature != "special_tokens_mask"
}
if (
model is not None
and "decoder_input_ids" not in train_signature
and hasattr(model, "prepare_decoder_input_ids_from_labels")
):
train_signature["decoder_input_ids"] = train_signature["labels"]
# This may need to be changed depending on your particular model or tokenizer!
padding_values = {
key: tf.convert_to_tensor(tokenizer.pad_token_id if tokenizer.pad_token_id is not None else 0, dtype=tf.int32)
for key in train_signature.keys()
}
padding_values["labels"] = tf.convert_to_tensor(-100, dtype=tf.int32)
train_signature["labels"] = train_signature["input_ids"]
train_signature = (train_signature, train_signature["labels"])
options = tf.data.Options()
options.experimental_distribute.auto_shard_policy = tf.data.experimental.AutoShardPolicy.OFF
tf_dataset = (
tf.data.Dataset.from_generator(train_generator, output_signature=train_signature)
.with_options(options)
.padded_batch(
batch_size=total_batch_size,
drop_remainder=True,
padding_values=(padding_values, np.array(-100, dtype=np.int32)),
)
.repeat(int(num_epochs))
)
return tf_dataset
# endregion
def main():
# region Argument parsing
# See all possible arguments in src/transformers/training_args.py
# or by passing the --help flag to this script.
# We now keep distinct sets of args, for a cleaner separation of concerns.
parser = HfArgumentParser((ModelArguments, DataTrainingArguments, TFTrainingArguments))
if len(sys.argv) == 2 and sys.argv[1].endswith(".json"):
# If we pass only one argument to the script and it's the path to a json file,
# let's parse it to get our arguments.
model_args, data_args, training_args = parser.parse_json_file(json_file=os.path.abspath(sys.argv[1]))
else:
model_args, data_args, training_args = parser.parse_args_into_dataclasses()
# endregion
# region Logging
logging.basicConfig(
format="%(asctime)s - %(levelname)s - %(name)s - %(message)s",
datefmt="%m/%d/%Y %H:%M:%S",
handlers=[logging.StreamHandler(sys.stdout)],
)
logger.setLevel(logging.INFO)
datasets.utils.logging.set_verbosity(logging.INFO)
transformers.utils.logging.set_verbosity(logging.INFO)
# Log on each process the small summary:
logger.info(f"Training/evaluation parameters {training_args}")
# endregion
# region Detecting last checkpoint
last_checkpoint = None
if os.path.isdir(training_args.output_dir) and training_args.do_train and not training_args.overwrite_output_dir:
last_checkpoint = get_last_checkpoint(training_args.output_dir)
if last_checkpoint is None and len(os.listdir(training_args.output_dir)) > 0:
raise ValueError(
f"Output directory ({training_args.output_dir}) already exists and is not empty. "
"Use --overwrite_output_dir to overcome."
)
elif last_checkpoint is not None and training_args.resume_from_checkpoint is None:
logger.info(
f"Checkpoint detected, resuming training at {last_checkpoint}. To avoid this behavior, change "
"the `--output_dir` or add `--overwrite_output_dir` to train from scratch."
)
# endregion
# Set seed before initializing model.
set_seed(training_args.seed)
# region Load datasets
# Get the datasets: you can either provide your own CSV/JSON training and evaluation files (see below)
# or just provide the name of one of the public datasets available on the hub at https://huggingface.co/datasets/
# (the dataset will be downloaded automatically from the datasets Hub).
#
# For CSV/JSON files this script will use the first column for the full texts and the second column for the
# summaries (unless you specify column names for this with the `text_column` and `summary_column` arguments).
#
# In distributed training, the load_dataset function guarantee that only one local process can concurrently
# download the dataset.
if data_args.dataset_name is not None:
# Downloading and loading a dataset from the hub.
raw_datasets = load_dataset(
data_args.dataset_name, data_args.dataset_config_name, cache_dir=model_args.cache_dir
)
else:
data_files = {}
if data_args.train_file is not None:
data_files["train"] = data_args.train_file
extension = data_args.train_file.split(".")[-1]
if data_args.validation_file is not None:
data_files["validation"] = data_args.validation_file
extension = data_args.validation_file.split(".")[-1]
raw_datasets = load_dataset(extension, data_files=data_files, cache_dir=model_args.cache_dir)
# See more about loading any type of standard or custom dataset (from files, python dict, pandas DataFrame, etc) at
# https://huggingface.co/docs/datasets/loading_datasets.html.
# endregion
# region Load model config and tokenizer
#
# Distributed training:
# The .from_pretrained methods guarantee that only one local process can concurrently
# download model & vocab.
config = AutoConfig.from_pretrained(
model_args.config_name if model_args.config_name else model_args.model_name_or_path,
cache_dir=model_args.cache_dir,
revision=model_args.model_revision,
use_auth_token=True if model_args.use_auth_token else None,
)
tokenizer = AutoTokenizer.from_pretrained(
model_args.tokenizer_name if model_args.tokenizer_name else model_args.model_name_or_path,
cache_dir=model_args.cache_dir,
use_fast=model_args.use_fast_tokenizer,
revision=model_args.model_revision,
use_auth_token=True if model_args.use_auth_token else None,
)
prefix = data_args.source_prefix if data_args.source_prefix is not None else ""
# endregion
# region Dataset preprocessing
# We need to tokenize inputs and targets.
if training_args.do_train:
column_names = raw_datasets["train"].column_names
elif training_args.do_eval:
column_names = raw_datasets["validation"].column_names
else:
logger.info("There is nothing to do. Please pass `do_train`, and/or `do_eval`.")
return
column_names = raw_datasets["train"].column_names
# For translation we set the codes of our source and target languages (only useful for mBART, the others will
# ignore those attributes).
if isinstance(tokenizer, tuple(MULTILINGUAL_TOKENIZERS)):
assert data_args.target_lang is not None and data_args.source_lang is not None, (
f"{tokenizer.__class__.__name__} is a multilingual tokenizer which requires --source_lang and "
"--target_lang arguments."
)
tokenizer.src_lang = data_args.source_lang
tokenizer.tgt_lang = data_args.target_lang
forced_bos_token_id = (
tokenizer.lang_code_to_id[data_args.forced_bos_token] if data_args.forced_bos_token is not None else None
)
# Get the language codes for input/target.
source_lang = data_args.source_lang.split("_")[0]
target_lang = data_args.target_lang.split("_")[0]
padding = "max_length" if data_args.pad_to_max_length else False
# Temporarily set max_target_length for training.
max_target_length = data_args.max_target_length
padding = "max_length" if data_args.pad_to_max_length else False
def preprocess_function(examples):
inputs = [ex[source_lang] for ex in examples["translation"]]
targets = [ex[target_lang] for ex in examples["translation"]]
inputs = [prefix + inp for inp in inputs]
model_inputs = tokenizer(inputs, max_length=data_args.max_source_length, padding=padding, truncation=True)
# Setup the tokenizer for targets
with tokenizer.as_target_tokenizer():
labels = tokenizer(targets, max_length=max_target_length, padding=padding, truncation=True)
# If we are padding here, replace all tokenizer.pad_token_id in the labels by -100 when we want to ignore
# padding in the loss.
if padding == "max_length" and data_args.ignore_pad_token_for_loss:
labels["input_ids"] = [
[(l if l != tokenizer.pad_token_id else -100) for l in label] for label in labels["input_ids"]
]
model_inputs["labels"] = labels["input_ids"]
return model_inputs
if training_args.do_train:
if "train" not in raw_datasets:
raise ValueError("--do_train requires a train dataset")
train_dataset = raw_datasets["train"]
if data_args.max_train_samples is not None:
train_dataset = train_dataset.select(range(data_args.max_train_samples))
with training_args.main_process_first(desc="train dataset map pre-processing"):
train_dataset = train_dataset.map(
preprocess_function,
batched=True,
num_proc=data_args.preprocessing_num_workers,
remove_columns=column_names,
load_from_cache_file=not data_args.overwrite_cache,
desc="Running tokenizer on train dataset",
)
else:
train_dataset = None
if training_args.do_eval:
max_target_length = data_args.val_max_target_length
if "validation" not in raw_datasets:
raise ValueError("--do_eval requires a validation dataset")
eval_dataset = raw_datasets["validation"]
if data_args.max_eval_samples is not None:
eval_dataset = eval_dataset.select(range(data_args.max_eval_samples))
with training_args.main_process_first(desc="validation dataset map pre-processing"):
eval_dataset = eval_dataset.map(
preprocess_function,
batched=True,
num_proc=data_args.preprocessing_num_workers,
remove_columns=column_names,
load_from_cache_file=not data_args.overwrite_cache,
desc="Running tokenizer on validation dataset",
)
else:
eval_dataset = None
# endregion
with training_args.strategy.scope():
# region Prepare model
model = TFAutoModelForSeq2SeqLM.from_pretrained(
model_args.model_name_or_path,
config=config,
cache_dir=model_args.cache_dir,
revision=model_args.model_revision,
use_auth_token=True if model_args.use_auth_token else None,
)
model.resize_token_embeddings(len(tokenizer))
if isinstance(tokenizer, tuple(MULTILINGUAL_TOKENIZERS)):
model.config.forced_bos_token_id = forced_bos_token_id
# endregion
# region Set decoder_start_token_id
if model.config.decoder_start_token_id is None and isinstance(tokenizer, (MBartTokenizer, MBartTokenizerFast)):
assert (
data_args.target_lang is not None and data_args.source_lang is not None
), "mBart requires --target_lang and --source_lang"
if isinstance(tokenizer, MBartTokenizer):
model.config.decoder_start_token_id = tokenizer.lang_code_to_id[data_args.target_lang]
else:
model.config.decoder_start_token_id = tokenizer.convert_tokens_to_ids(data_args.target_lang)
if model.config.decoder_start_token_id is None:
raise ValueError("Make sure that `config.decoder_start_token_id` is correctly defined")
# endregion
# region Prepare TF Dataset objects
num_replicas = training_args.strategy.num_replicas_in_sync
total_train_batch_size = training_args.per_device_train_batch_size * num_replicas
total_eval_batch_size = training_args.per_device_eval_batch_size * num_replicas
tf_train_dataset = dataset_to_tf(
train_dataset,
model,
tokenizer,
total_batch_size=total_train_batch_size,
num_epochs=training_args.num_train_epochs,
shuffle=True,
)
tf_eval_dataset = dataset_to_tf(
eval_dataset,
model,
tokenizer,
total_eval_batch_size,
num_epochs=1,
shuffle=False,
)
# endregion
# region Optimizer, loss and LR scheduling
# Scheduler and math around the number of training steps.
num_update_steps_per_epoch = len(train_dataset) // training_args.per_device_train_batch_size
num_train_steps = training_args.num_train_epochs * num_update_steps_per_epoch
optimizer, lr_schedule = create_optimizer(
init_lr=training_args.learning_rate,
num_train_steps=num_train_steps,
num_warmup_steps=training_args.warmup_steps,
)
def masked_sparse_categorical_crossentropy(y_true, y_pred):
# We clip the negative labels to 0 to avoid NaNs appearing in the output and
# fouling up everything that comes afterwards. The loss values corresponding to clipped values
# will be masked later anyway, but even masked NaNs seem to cause overflows for some reason.
# 1e6 is chosen as a reasonable upper bound for the number of token indices - in the unlikely
# event that you have more than 1 million tokens in your vocabulary, consider increasing this value.
# More pragmatically, consider redesigning your tokenizer.
losses = tf.keras.losses.sparse_categorical_crossentropy(
tf.clip_by_value(y_true, 0, int(1e6)), y_pred, from_logits=True
)
# Compute the per-sample loss only over the unmasked tokens
losses = tf.ragged.boolean_mask(losses, y_true != -100)
losses = tf.reduce_mean(losses, axis=-1)
return losses
# endregion
# region Metric and postprocessing
metric = load_metric("sacrebleu")
def postprocess_text(preds, labels):
preds = [pred.strip() for pred in preds]
labels = [[label.strip()] for label in labels]
return preds, labels
# endregion
# region Training
model.compile(loss={"logits": masked_sparse_categorical_crossentropy}, optimizer=optimizer)
if training_args.do_train:
logger.info("***** Running training *****")
logger.info(f" Num examples = {len(train_dataset)}")
logger.info(f" Num Epochs = {training_args.num_train_epochs}")
logger.info(f" Instantaneous batch size per device = {training_args.per_device_train_batch_size}")
logger.info(f" Total train batch size = {total_train_batch_size}")
logger.info(f" Total optimization steps = {num_train_steps}")
model.fit(
tf_train_dataset,
epochs=int(training_args.num_train_epochs),
steps_per_epoch=num_update_steps_per_epoch,
)
# endregion
# region Validation
if data_args.val_max_target_length is None:
data_args.val_max_target_length = data_args.max_target_length
gen_kwargs = {
"max_length": data_args.val_max_target_length,
"num_beams": data_args.num_beams,
}
if training_args.do_eval:
logger.info("Evaluation...")
for batch, labels in tqdm(
tf_eval_dataset, total=len(eval_dataset) // training_args.per_device_eval_batch_size
):
batch.update(gen_kwargs)
generated_tokens = model.generate(**batch)
if isinstance(generated_tokens, tuple):
generated_tokens = generated_tokens[0]
decoded_preds = tokenizer.batch_decode(generated_tokens, skip_special_tokens=True)
labels = np.where(labels != -100, labels, tokenizer.pad_token_id)
decoded_labels = tokenizer.batch_decode(labels, skip_special_tokens=True)
decoded_preds, decoded_labels = postprocess_text(decoded_preds, decoded_labels)
metric.add_batch(predictions=decoded_preds, references=decoded_labels)
eval_metric = metric.compute()
logger.info({"bleu": eval_metric["score"]})
# endregion
if training_args.output_dir is not None:
model.save_pretrained(training_args.output_dir)
if __name__ == "__main__":
main()
| 26,661 | 41.933977 | 120 | py |
robust-transformers | robust-transformers-main/examples/tensorflow/language-modeling/run_mlm.py | #!/usr/bin/env python
# coding=utf-8
# Copyright 2021 The HuggingFace Inc. team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
"""
Fine-tuning the library models for masked language modeling (BERT, ALBERT, RoBERTa...)
on a text file or a dataset without using HuggingFace Trainer.
Here is the full list of checkpoints on the hub that can be fine-tuned by this script:
https://huggingface.co/models?filter=fill-mask
"""
# You can also adapt this script on your own mlm task. Pointers for this are left as comments.
# TODO Do multi-GPU and TPU tests and make sure the dataset length works as expected
# TODO Duplicate all changes over to the CLM script
import logging
import math
import os
import random
import sys
from dataclasses import dataclass, field
from itertools import chain
from pathlib import Path
from typing import Optional
import datasets
import tensorflow as tf
from datasets import load_dataset
from sklearn.model_selection import train_test_split
import transformers
from transformers import (
CONFIG_MAPPING,
CONFIG_NAME,
TF2_WEIGHTS_NAME,
TF_MODEL_FOR_MASKED_LM_MAPPING,
AutoConfig,
AutoTokenizer,
DataCollatorForLanguageModeling,
HfArgumentParser,
TFAutoModelForMaskedLM,
TFTrainingArguments,
create_optimizer,
set_seed,
)
from transformers.utils.versions import require_version
logger = logging.getLogger(__name__)
require_version("datasets>=1.8.0", "To fix: pip install -r examples/tensorflow/language-modeling/requirements.txt")
MODEL_CONFIG_CLASSES = list(TF_MODEL_FOR_MASKED_LM_MAPPING.keys())
MODEL_TYPES = tuple(conf.model_type for conf in MODEL_CONFIG_CLASSES)
# region Command-line arguments
@dataclass
class ModelArguments:
"""
Arguments pertaining to which model/config/tokenizer we are going to fine-tune, or train from scratch.
"""
model_name_or_path: Optional[str] = field(
default=None,
metadata={
"help": "The model checkpoint for weights initialization."
"Don't set if you want to train a model from scratch."
},
)
model_type: Optional[str] = field(
default=None,
metadata={"help": "If training from scratch, pass a model type from the list: " + ", ".join(MODEL_TYPES)},
)
config_overrides: Optional[str] = field(
default=None,
metadata={
"help": "Override some existing default config settings when a model is trained from scratch. Example: "
"n_embd=10,resid_pdrop=0.2,scale_attn_weights=false,summary_type=cls_index"
},
)
config_name: Optional[str] = field(
default=None, metadata={"help": "Pretrained config name or path if not the same as model_name"}
)
tokenizer_name: Optional[str] = field(
default=None, metadata={"help": "Pretrained tokenizer name or path if not the same as model_name"}
)
cache_dir: Optional[str] = field(
default=None,
metadata={"help": "Where do you want to store the pretrained models downloaded from huggingface.co"},
)
use_fast_tokenizer: bool = field(
default=True,
metadata={"help": "Whether to use one of the fast tokenizer (backed by the tokenizers library) or not."},
)
model_revision: str = field(
default="main",
metadata={"help": "The specific model version to use (can be a branch name, tag name or commit id)."},
)
use_auth_token: bool = field(
default=False,
metadata={
"help": "Will use the token generated when running `transformers-cli login` (necessary to use this script "
"with private models)."
},
)
def __post_init__(self):
if self.config_overrides is not None and (self.config_name is not None or self.model_name_or_path is not None):
raise ValueError(
"--config_overrides can't be used in combination with --config_name or --model_name_or_path"
)
@dataclass
class DataTrainingArguments:
"""
Arguments pertaining to what data we are going to input our model for training and eval.
"""
dataset_name: Optional[str] = field(
default=None, metadata={"help": "The name of the dataset to use (via the datasets library)."}
)
dataset_config_name: Optional[str] = field(
default=None, metadata={"help": "The configuration name of the dataset to use (via the datasets library)."}
)
train_file: Optional[str] = field(default=None, metadata={"help": "The input training data file (a text file)."})
validation_file: Optional[str] = field(
default=None,
metadata={"help": "An optional input evaluation data file to evaluate the perplexity on (a text file)."},
)
overwrite_cache: bool = field(
default=False, metadata={"help": "Overwrite the cached training and evaluation sets"}
)
validation_split_percentage: Optional[int] = field(
default=5,
metadata={
"help": "The percentage of the train set used as validation set in case there's no validation split"
},
)
max_seq_length: Optional[int] = field(
default=None,
metadata={
"help": "The maximum total input sequence length after tokenization. Sequences longer "
"than this will be truncated."
},
)
preprocessing_num_workers: Optional[int] = field(
default=None,
metadata={"help": "The number of processes to use for the preprocessing."},
)
mlm_probability: float = field(
default=0.15, metadata={"help": "Ratio of tokens to mask for masked language modeling loss"}
)
line_by_line: bool = field(
default=False,
metadata={"help": "Whether distinct lines of text in the dataset are to be handled as distinct sequences."},
)
pad_to_max_length: bool = field(
default=False,
metadata={
"help": "Whether to pad all samples to `max_seq_length`. "
"If False, will pad the samples dynamically when batching to the maximum length in the batch."
},
)
max_train_samples: Optional[int] = field(
default=None,
metadata={
"help": "For debugging purposes or quicker training, truncate the number of training examples to this "
"value if set."
},
)
max_eval_samples: Optional[int] = field(
default=None,
metadata={
"help": "For debugging purposes or quicker training, truncate the number of evaluation examples to this "
"value if set."
},
)
def __post_init__(self):
if self.dataset_name is None and self.train_file is None and self.validation_file is None:
raise ValueError("Need either a dataset name or a training/validation file.")
else:
if self.train_file is not None:
extension = self.train_file.split(".")[-1]
assert extension in ["csv", "json", "txt"], "`train_file` should be a csv, a json or a txt file."
if self.validation_file is not None:
extension = self.validation_file.split(".")[-1]
assert extension in ["csv", "json", "txt"], "`validation_file` should be a csv, a json or a txt file."
# endregion
# region Helper classes
class SavePretrainedCallback(tf.keras.callbacks.Callback):
# Hugging Face models have a save_pretrained() method that saves both the weights and the necessary
# metadata to allow them to be loaded as a pretrained model in future. This is a simple Keras callback
# that saves the model with this method after each epoch.
def __init__(self, output_dir, **kwargs):
super().__init__()
self.output_dir = output_dir
def on_epoch_end(self, epoch, logs=None):
self.model.save_pretrained(self.output_dir)
# endregion
def main():
# region Argument Parsing
parser = HfArgumentParser((ModelArguments, DataTrainingArguments, TFTrainingArguments))
if len(sys.argv) == 2 and sys.argv[1].endswith(".json"):
# If we pass only one argument to the script and it's the path to a json file,
# let's parse it to get our arguments.
model_args, data_args, training_args = parser.parse_json_file(json_file=os.path.abspath(sys.argv[1]))
else:
model_args, data_args, training_args = parser.parse_args_into_dataclasses()
# Sanity checks
if data_args.dataset_name is None and data_args.train_file is None and data_args.validation_file is None:
raise ValueError("Need either a dataset name or a training/validation file.")
else:
if data_args.train_file is not None:
extension = data_args.train_file.split(".")[-1]
assert extension in ["csv", "json", "txt"], "`train_file` should be a csv, json or txt file."
if data_args.validation_file is not None:
extension = data_args.validation_file.split(".")[-1]
assert extension in ["csv", "json", "txt"], "`validation_file` should be a csv, json or txt file."
if training_args.output_dir is not None:
training_args.output_dir = Path(training_args.output_dir)
os.makedirs(training_args.output_dir, exist_ok=True)
if isinstance(training_args.strategy, tf.distribute.TPUStrategy) and not data_args.pad_to_max_length:
logger.warning("We are training on TPU - forcing pad_to_max_length")
data_args.pad_to_max_length = True
# endregion
# region Checkpoints
# Detecting last checkpoint.
checkpoint = None
if len(os.listdir(training_args.output_dir)) > 0 and not training_args.overwrite_output_dir:
config_path = training_args.output_dir / CONFIG_NAME
weights_path = training_args.output_dir / TF2_WEIGHTS_NAME
if config_path.is_file() and weights_path.is_file():
checkpoint = training_args.output_dir
logger.warning(
f"Checkpoint detected, resuming training from checkpoint in {training_args.output_dir}. To avoid this"
" behavior, change the `--output_dir` or add `--overwrite_output_dir` to train from scratch."
)
else:
raise ValueError(
f"Output directory ({training_args.output_dir}) already exists and is not empty. "
"Use --overwrite_output_dir to continue regardless."
)
# endregion
# region Setup logging
# accelerator.is_local_main_process is only True for one process per machine.
logger.setLevel(logging.INFO)
datasets.utils.logging.set_verbosity_warning()
transformers.utils.logging.set_verbosity_info()
# endregion
# If passed along, set the training seed now.
if training_args.seed is not None:
set_seed(training_args.seed)
# region Load datasets
# Get the datasets: you can either provide your own CSV/JSON/TXT training and evaluation files (see below)
# or just provide the name of one of the public datasets available on the hub at https://huggingface.co/datasets/
# (the dataset will be downloaded automatically from the datasets Hub).
#
# For CSV/JSON files, this script will use the column called 'text' or the first column if no column called
# 'text' is found. You can easily tweak this behavior (see below).
#
# In distributed training, the load_dataset function guarantee that only one local process can concurrently
# download the dataset.
if data_args.dataset_name is not None:
# Downloading and loading a dataset from the hub.
raw_datasets = load_dataset(data_args.dataset_name, data_args.dataset_config_name)
if "validation" not in raw_datasets.keys():
raw_datasets["validation"] = load_dataset(
data_args.dataset_name,
data_args.dataset_config_name,
split=f"train[:{data_args.validation_split_percentage}%]",
)
raw_datasets["train"] = load_dataset(
data_args.dataset_name,
data_args.dataset_config_name,
split=f"train[{data_args.validation_split_percentage}%:]",
)
else:
data_files = {}
if data_args.train_file is not None:
data_files["train"] = data_args.train_file
if data_args.validation_file is not None:
data_files["validation"] = data_args.validation_file
extension = data_args.train_file.split(".")[-1]
if extension == "txt":
extension = "text"
raw_datasets = load_dataset(extension, data_files=data_files)
# See more about loading any type of standard or custom dataset (from files, python dict, pandas DataFrame, etc) at
# https://huggingface.co/docs/datasets/loading_datasets.html.
# endregion
# region Load pretrained model and tokenizer
#
# In distributed training, the .from_pretrained methods guarantee that only one local process can concurrently
# download model & vocab.
if checkpoint is not None:
config = AutoConfig.from_pretrained(checkpoint)
elif model_args.config_name:
config = AutoConfig.from_pretrained(model_args.config_name)
elif model_args.model_name_or_path:
config = AutoConfig.from_pretrained(model_args.model_name_or_path)
else:
config = CONFIG_MAPPING[model_args.model_type]()
logger.warning("You are instantiating a new config instance from scratch.")
if model_args.tokenizer_name:
tokenizer = AutoTokenizer.from_pretrained(model_args.tokenizer_name)
elif model_args.model_name_or_path:
tokenizer = AutoTokenizer.from_pretrained(model_args.model_name_or_path)
else:
raise ValueError(
"You are instantiating a new tokenizer from scratch. This is not supported by this script."
"You can do it from another script, save it, and load it from here, using --tokenizer_name."
)
# endregion
# region Dataset preprocessing
# First we tokenize all the texts.
column_names = raw_datasets["train"].column_names
text_column_name = "text" if "text" in column_names else column_names[0]
if data_args.max_seq_length is None:
max_seq_length = tokenizer.model_max_length
if max_seq_length > 1024:
logger.warning(
f"The tokenizer picked seems to have a very large `model_max_length` ({tokenizer.model_max_length}). "
"Picking 1024 instead. You can reduce that default value by passing --max_seq_length xxx."
)
max_seq_length = 1024
else:
if data_args.max_seq_length > tokenizer.model_max_length:
logger.warning(
f"The max_seq_length passed ({data_args.max_seq_length}) is larger than the maximum length for the"
f"model ({tokenizer.model_max_length}). Using max_seq_length={tokenizer.model_max_length}."
)
max_seq_length = min(data_args.max_seq_length, tokenizer.model_max_length)
if data_args.line_by_line:
# When using line_by_line, we just tokenize each nonempty line.
padding = "max_length" if data_args.pad_to_max_length else False
def tokenize_function(examples):
# Remove empty lines
examples[text_column_name] = [
line for line in examples[text_column_name] if len(line) > 0 and not line.isspace()
]
return tokenizer(
examples[text_column_name],
padding=padding,
truncation=True,
max_length=max_seq_length,
# We use this option because DataCollatorForLanguageModeling (see below) is more efficient when it
# receives the `special_tokens_mask`.
return_special_tokens_mask=True,
)
tokenized_datasets = raw_datasets.map(
tokenize_function,
batched=True,
num_proc=data_args.preprocessing_num_workers,
remove_columns=[text_column_name],
load_from_cache_file=not data_args.overwrite_cache,
desc="Running tokenizer on dataset line_by_line",
)
else:
# Otherwise, we tokenize every text, then concatenate them together before splitting them in smaller parts.
# We use `return_special_tokens_mask=True` because DataCollatorForLanguageModeling (see below) is more
# efficient when it receives the `special_tokens_mask`.
def tokenize_function(examples):
return tokenizer(examples[text_column_name], return_special_tokens_mask=True)
tokenized_datasets = raw_datasets.map(
tokenize_function,
batched=True,
num_proc=data_args.preprocessing_num_workers,
remove_columns=column_names,
load_from_cache_file=not data_args.overwrite_cache,
desc="Running tokenizer on every text in dataset",
)
# Main data processing function that will concatenate all texts from our dataset and generate chunks of
# max_seq_length.
def group_texts(examples):
# Concatenate all texts.
concatenated_examples = {k: list(chain(*examples[k])) for k in examples.keys()}
total_length = len(concatenated_examples[list(examples.keys())[0]])
# We drop the small remainder, we could add padding if the model supported it instead of this drop, you can
# customize this part to your needs.
if total_length >= max_seq_length:
total_length = (total_length // max_seq_length) * max_seq_length
# Split by chunks of max_len.
result = {
k: [t[i : i + max_seq_length] for i in range(0, total_length, max_seq_length)]
for k, t in concatenated_examples.items()
}
return result
# Note that with `batched=True`, this map processes 1,000 texts together, so group_texts throws away a
# remainder for each of those groups of 1,000 texts. You can adjust that batch_size here but a higher value
# might be slower to preprocess.
#
# To speed up this part, we use multiprocessing. See the documentation of the map method for more information:
# https://huggingface.co/docs/datasets/package_reference/main_classes.html#datasets.Dataset.map
tokenized_datasets = tokenized_datasets.map(
group_texts,
batched=True,
num_proc=data_args.preprocessing_num_workers,
load_from_cache_file=not data_args.overwrite_cache,
desc=f"Grouping texts in chunks of {max_seq_length}",
)
train_dataset = tokenized_datasets["train"]
if data_args.validation_file is not None:
eval_dataset = tokenized_datasets["validation"]
else:
logger.info(
f"Validation file not found: using {data_args.validation_split_percentage}% of the dataset as validation as provided in data_args"
)
train_indices, val_indices = train_test_split(
list(range(len(train_dataset))), test_size=data_args.validation_split_percentage / 100
)
eval_dataset = train_dataset.select(val_indices)
train_dataset = train_dataset.select(train_indices)
if data_args.max_train_samples is not None:
train_dataset = train_dataset.select(range(data_args.max_train_samples))
if data_args.max_eval_samples is not None:
eval_dataset = eval_dataset.select(range(data_args.max_eval_samples))
# Log a few random samples from the training set:
for index in random.sample(range(len(train_dataset)), 3):
logger.info(f"Sample {index} of the training set: {train_dataset[index]}.")
# endregion
with training_args.strategy.scope():
# region Prepare model
if checkpoint is not None:
model = TFAutoModelForMaskedLM.from_pretrained(checkpoint, config=config)
elif model_args.model_name_or_path:
model = TFAutoModelForMaskedLM.from_pretrained(model_args.model_name_or_path, config=config)
else:
logger.info("Training new model from scratch")
model = TFAutoModelForMaskedLM.from_config(config)
model.resize_token_embeddings(len(tokenizer))
# endregion
# region TF Dataset preparation
num_replicas = training_args.strategy.num_replicas_in_sync
data_collator = DataCollatorForLanguageModeling(
tokenizer=tokenizer, mlm_probability=data_args.mlm_probability, return_tensors="tf"
)
options = tf.data.Options()
options.experimental_distribute.auto_shard_policy = tf.data.experimental.AutoShardPolicy.OFF
tf_train_dataset = train_dataset.to_tf_dataset(
# labels are passed as input, as we will use the model's internal loss
columns=[col for col in train_dataset.features if col != "special_tokens_mask"] + ["labels"],
shuffle=True,
batch_size=num_replicas * training_args.per_device_train_batch_size,
collate_fn=data_collator,
drop_remainder=True,
).with_options(options)
tf_eval_dataset = eval_dataset.to_tf_dataset(
# labels are passed as input, as we will use the model's internal loss
columns=[col for col in eval_dataset.features if col != "special_tokens_mask"] + ["labels"],
shuffle=False,
batch_size=num_replicas * training_args.per_device_train_batch_size,
collate_fn=data_collator,
drop_remainder=True,
).with_options(options)
# endregion
# region Optimizer and loss
batches_per_epoch = len(train_dataset) // (num_replicas * training_args.per_device_train_batch_size)
# Bias and layernorm weights are automatically excluded from the decay
optimizer, lr_schedule = create_optimizer(
init_lr=training_args.learning_rate,
num_train_steps=int(training_args.num_train_epochs * batches_per_epoch),
num_warmup_steps=training_args.warmup_steps,
adam_beta1=training_args.adam_beta1,
adam_beta2=training_args.adam_beta2,
adam_epsilon=training_args.adam_epsilon,
weight_decay_rate=training_args.weight_decay,
)
# no user-specified loss = will use the model internal loss
model.compile(optimizer=optimizer)
# endregion
# region Training and validation
logger.info("***** Running training *****")
logger.info(f" Num examples = {len(train_dataset)}")
logger.info(f" Num Epochs = {training_args.num_train_epochs}")
logger.info(f" Instantaneous batch size per device = {training_args.per_device_train_batch_size}")
logger.info(f" Total train batch size = {training_args.per_device_train_batch_size * num_replicas}")
history = model.fit(
tf_train_dataset,
validation_data=tf_eval_dataset,
epochs=int(training_args.num_train_epochs),
steps_per_epoch=len(train_dataset) // (training_args.per_device_train_batch_size * num_replicas),
callbacks=[SavePretrainedCallback(output_dir=training_args.output_dir)],
)
try:
train_perplexity = math.exp(history.history["loss"][-1])
except OverflowError:
train_perplexity = math.inf
try:
validation_perplexity = math.exp(history.history["val_loss"][-1])
except OverflowError:
validation_perplexity = math.inf
logger.warning(f" Final train loss: {history.history['loss'][-1]:.3f}")
logger.warning(f" Final train perplexity: {train_perplexity:.3f}")
logger.warning(f" Final validation loss: {history.history['val_loss'][-1]:.3f}")
logger.warning(f" Final validation perplexity: {validation_perplexity:.3f}")
# endregion
if training_args.output_dir is not None:
model.save_pretrained(training_args.output_dir)
if training_args.push_to_hub:
# You'll probably want to append some of your own metadata here!
model.push_to_hub()
if __name__ == "__main__":
main()
| 24,808 | 43.065719 | 142 | py |
robust-transformers | robust-transformers-main/examples/tensorflow/language-modeling/run_clm.py | #!/usr/bin/env python
# coding=utf-8
# Copyright 2021 The HuggingFace Inc. team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
"""
Fine-tuning the library models for causal language modeling (GPT-2, GPT-Neo...)
on a text file or a dataset without using HuggingFace Trainer.
Here is the full list of checkpoints on the hub that can be fine-tuned by this script:
https://huggingface.co/models?filter=text-generation
"""
# You can also adapt this script on your own clm task. Pointers for this are left as comments.
# region Imports
import logging
import math
import os
import random
import sys
from dataclasses import dataclass, field
from itertools import chain
from pathlib import Path
from typing import Optional
import datasets
import tensorflow as tf
from datasets import load_dataset
from sklearn.model_selection import train_test_split
import transformers
from transformers import (
CONFIG_MAPPING,
CONFIG_NAME,
TF2_WEIGHTS_NAME,
TF_MODEL_FOR_CAUSAL_LM_MAPPING,
AutoConfig,
AutoTokenizer,
DefaultDataCollator,
HfArgumentParser,
TFAutoModelForCausalLM,
TFTrainingArguments,
create_optimizer,
set_seed,
)
from transformers.utils.versions import require_version
logger = logging.getLogger(__name__)
require_version("datasets>=1.8.0", "To fix: pip install -r examples/tensorflow/language-modeling/requirements.txt")
MODEL_CONFIG_CLASSES = list(TF_MODEL_FOR_CAUSAL_LM_MAPPING.keys())
MODEL_TYPES = tuple(conf.model_type for conf in MODEL_CONFIG_CLASSES)
# endregion
# region Command-line arguments
@dataclass
class ModelArguments:
"""
Arguments pertaining to which model/config/tokenizer we are going to fine-tune, or train from scratch.
"""
model_name_or_path: Optional[str] = field(
default=None,
metadata={
"help": "The model checkpoint for weights initialization."
"Don't set if you want to train a model from scratch."
},
)
model_type: Optional[str] = field(
default=None,
metadata={"help": "If training from scratch, pass a model type from the list: " + ", ".join(MODEL_TYPES)},
)
config_overrides: Optional[str] = field(
default=None,
metadata={
"help": "Override some existing default config settings when a model is trained from scratch. Example: "
"n_embd=10,resid_pdrop=0.2,scale_attn_weights=false,summary_type=cls_index"
},
)
config_name: Optional[str] = field(
default=None, metadata={"help": "Pretrained config name or path if not the same as model_name"}
)
tokenizer_name: Optional[str] = field(
default=None, metadata={"help": "Pretrained tokenizer name or path if not the same as model_name"}
)
cache_dir: Optional[str] = field(
default=None,
metadata={"help": "Where do you want to store the pretrained models downloaded from huggingface.co"},
)
use_fast_tokenizer: bool = field(
default=True,
metadata={"help": "Whether to use one of the fast tokenizer (backed by the tokenizers library) or not."},
)
model_revision: str = field(
default="main",
metadata={"help": "The specific model version to use (can be a branch name, tag name or commit id)."},
)
use_auth_token: bool = field(
default=False,
metadata={
"help": "Will use the token generated when running `transformers-cli login` (necessary to use this script "
"with private models)."
},
)
def __post_init__(self):
if self.config_overrides is not None and (self.config_name is not None or self.model_name_or_path is not None):
raise ValueError(
"--config_overrides can't be used in combination with --config_name or --model_name_or_path"
)
@dataclass
class DataTrainingArguments:
"""
Arguments pertaining to what data we are going to input our model for training and eval.
"""
dataset_name: Optional[str] = field(
default=None, metadata={"help": "The name of the dataset to use (via the datasets library)."}
)
dataset_config_name: Optional[str] = field(
default=None, metadata={"help": "The configuration name of the dataset to use (via the datasets library)."}
)
train_file: Optional[str] = field(default=None, metadata={"help": "The input training data file (a text file)."})
validation_file: Optional[str] = field(
default=None,
metadata={"help": "An optional input evaluation data file to evaluate the perplexity on (a text file)."},
)
overwrite_cache: bool = field(
default=False, metadata={"help": "Overwrite the cached training and evaluation sets"}
)
validation_split_percentage: Optional[int] = field(
default=5,
metadata={
"help": "The percentage of the train set used as validation set in case there's no validation split"
},
)
block_size: Optional[int] = field(
default=None,
metadata={
"help": "Optional input sequence length after tokenization. "
"The training dataset will be truncated in block of this size for training. "
"Default to the model max input length for single sentence inputs (take into account special tokens)."
},
)
preprocessing_num_workers: Optional[int] = field(
default=None,
metadata={"help": "The number of processes to use for the preprocessing."},
)
line_by_line: bool = field(
default=False,
metadata={"help": "Whether distinct lines of text in the dataset are to be handled as distinct sequences."},
)
max_train_samples: Optional[int] = field(
default=None,
metadata={
"help": "For debugging purposes or quicker training, truncate the number of training examples to this "
"value if set."
},
)
max_eval_samples: Optional[int] = field(
default=None,
metadata={
"help": "For debugging purposes or quicker training, truncate the number of evaluation examples to this "
"value if set."
},
)
keep_linebreaks: bool = field(
default=True, metadata={"help": "Whether to keep line breaks when using TXT files or not."}
)
def __post_init__(self):
if self.dataset_name is None and self.train_file is None and self.validation_file is None:
raise ValueError("Need either a dataset name or a training/validation file.")
else:
if self.train_file is not None:
extension = self.train_file.split(".")[-1]
assert extension in ["csv", "json", "txt"], "`train_file` should be a csv, a json or a txt file."
if self.validation_file is not None:
extension = self.validation_file.split(".")[-1]
assert extension in ["csv", "json", "txt"], "`validation_file` should be a csv, a json or a txt file."
# endregion
# region Helper classes
class SavePretrainedCallback(tf.keras.callbacks.Callback):
# Hugging Face models have a save_pretrained() method that saves both the weights and the necessary
# metadata to allow them to be loaded as a pretrained model in future. This is a simple Keras callback
# that saves the model with this method after each epoch.
def __init__(self, output_dir, **kwargs):
super().__init__()
self.output_dir = output_dir
def on_epoch_end(self, epoch, logs=None):
self.model.save_pretrained(self.output_dir)
# endregion
def main():
# region Argument Parsing
parser = HfArgumentParser((ModelArguments, DataTrainingArguments, TFTrainingArguments))
if len(sys.argv) == 2 and sys.argv[1].endswith(".json"):
# If we pass only one argument to the script and it's the path to a json file,
# let's parse it to get our arguments.
model_args, data_args, training_args = parser.parse_json_file(json_file=os.path.abspath(sys.argv[1]))
else:
model_args, data_args, training_args = parser.parse_args_into_dataclasses()
# Sanity checks
if data_args.dataset_name is None and data_args.train_file is None and data_args.validation_file is None:
raise ValueError("Need either a dataset name or a training/validation file.")
else:
if data_args.train_file is not None:
extension = data_args.train_file.split(".")[-1]
assert extension in ["csv", "json", "txt"], "`train_file` should be a csv, json or txt file."
if data_args.validation_file is not None:
extension = data_args.validation_file.split(".")[-1]
assert extension in ["csv", "json", "txt"], "`validation_file` should be a csv, json or txt file."
if training_args.output_dir is not None:
training_args.output_dir = Path(training_args.output_dir)
os.makedirs(training_args.output_dir, exist_ok=True)
# endregion
# region Checkpoints
# Detecting last checkpoint.
checkpoint = None
if len(os.listdir(training_args.output_dir)) > 0 and not training_args.overwrite_output_dir:
config_path = training_args.output_dir / CONFIG_NAME
weights_path = training_args.output_dir / TF2_WEIGHTS_NAME
if config_path.is_file() and weights_path.is_file():
checkpoint = training_args.output_dir
logger.info(
f"Checkpoint detected, resuming training from checkpoint in {training_args.output_dir}. To avoid this"
" behavior, change the `--output_dir` or add `--overwrite_output_dir` to train from scratch."
)
else:
raise ValueError(
f"Output directory ({training_args.output_dir}) already exists and is not empty. "
"Use --overwrite_output_dir to continue regardless."
)
# endregion
# region Setup logging
# accelerator.is_local_main_process is only True for one process per machine.
logger.setLevel(logging.INFO)
datasets.utils.logging.set_verbosity_warning()
transformers.utils.logging.set_verbosity_info()
# endregion
# If passed along, set the training seed now.
if training_args.seed is not None:
set_seed(training_args.seed)
# region Load datasets
# Get the datasets: you can either provide your own CSV/JSON/TXT training and evaluation files (see below)
# or just provide the name of one of the public datasets available on the hub at https://huggingface.co/datasets/
# (the dataset will be downloaded automatically from the datasets Hub).
#
# For CSV/JSON files, this script will use the column called 'text' or the first column if no column called
# 'text' is found. You can easily tweak this behavior (see below).
#
# In distributed training, the load_dataset function guarantee that only one local process can concurrently
# download the dataset.
if data_args.dataset_name is not None:
# Downloading and loading a dataset from the hub.
raw_datasets = load_dataset(data_args.dataset_name, data_args.dataset_config_name)
if "validation" not in raw_datasets.keys():
raw_datasets["validation"] = load_dataset(
data_args.dataset_name,
data_args.dataset_config_name,
split=f"train[:{data_args.validation_split_percentage}%]",
)
raw_datasets["train"] = load_dataset(
data_args.dataset_name,
data_args.dataset_config_name,
split=f"train[{data_args.validation_split_percentage}%:]",
)
else:
data_files = {}
dataset_args = {}
if data_args.train_file is not None:
data_files["train"] = data_args.train_file
if data_args.validation_file is not None:
data_files["validation"] = data_args.validation_file
extension = data_args.train_file.split(".")[-1]
if extension == "txt":
extension = "text"
dataset_args["keep_linebreaks"] = data_args.keep_linebreaks
raw_datasets = load_dataset(extension, data_files=data_files, **dataset_args)
# See more about loading any type of standard or custom dataset (from files, python dict, pandas DataFrame, etc) at
# https://huggingface.co/docs/datasets/loading_datasets.html.
# endregion
# region Load pretrained model and tokenizer
#
# In distributed training, the .from_pretrained methods guarantee that only one local process can concurrently
# download model & vocab.
if model_args.config_name:
config = AutoConfig.from_pretrained(model_args.config_name)
elif model_args.model_name_or_path:
config = AutoConfig.from_pretrained(model_args.model_name_or_path)
else:
config = CONFIG_MAPPING[model_args.model_type]()
logger.warning("You are instantiating a new config instance from scratch.")
if model_args.tokenizer_name:
tokenizer = AutoTokenizer.from_pretrained(model_args.tokenizer_name)
elif model_args.model_name_or_path:
tokenizer = AutoTokenizer.from_pretrained(model_args.model_name_or_path)
else:
raise ValueError(
"You are instantiating a new tokenizer from scratch. This is not supported by this script."
"You can do it from another script, save it, and load it from here, using --tokenizer_name."
)
# endregion
# region Dataset preprocessing
# First we tokenize all the texts.
column_names = raw_datasets["train"].column_names
text_column_name = "text" if "text" in column_names else column_names[0]
# First we tokenize all the texts.
column_names = raw_datasets["train"].column_names
text_column_name = "text" if "text" in column_names else column_names[0]
def tokenize_function(examples):
return tokenizer(examples[text_column_name])
tokenized_datasets = raw_datasets.map(
tokenize_function,
batched=True,
num_proc=data_args.preprocessing_num_workers,
remove_columns=column_names,
load_from_cache_file=not data_args.overwrite_cache,
desc="Running tokenizer on dataset",
)
if data_args.block_size is None:
block_size = tokenizer.model_max_length
if block_size > 1024:
logger.warning(
f"The tokenizer picked seems to have a very large `model_max_length` ({tokenizer.model_max_length}). "
"Picking 1024 instead. You can change that default value by passing --block_size xxx."
)
block_size = 1024
else:
if data_args.block_size > tokenizer.model_max_length:
logger.warning(
f"The block_size passed ({data_args.block_size}) is larger than the maximum length for the model"
f"({tokenizer.model_max_length}). Using block_size={tokenizer.model_max_length}."
)
block_size = min(data_args.block_size, tokenizer.model_max_length)
# Main data processing function that will concatenate all texts from our dataset and generate chunks of block_size.
def group_texts(examples):
# Concatenate all texts.
concatenated_examples = {k: list(chain(*examples[k])) for k in examples.keys()}
total_length = len(concatenated_examples[list(examples.keys())[0]])
# We drop the small remainder, we could add padding if the model supported it instead of this drop, you can
# customize this part to your needs.
if total_length >= block_size:
total_length = (total_length // block_size) * block_size
# Split by chunks of max_len.
result = {
k: [t[i : i + block_size] for i in range(0, total_length, block_size)]
for k, t in concatenated_examples.items()
}
result["labels"] = result["input_ids"].copy()
return result
# Note that with `batched=True`, this map processes 1,000 texts together, so group_texts throws away a remainder
# for each of those groups of 1,000 texts. You can adjust that batch_size here but a higher value might be slower
# to preprocess.
#
# To speed up this part, we use multiprocessing. See the documentation of the map method for more information:
# https://huggingface.co/docs/datasets/package_reference/main_classes.html#datasets.Dataset.map
lm_datasets = tokenized_datasets.map(
group_texts,
batched=True,
num_proc=data_args.preprocessing_num_workers,
load_from_cache_file=not data_args.overwrite_cache,
desc=f"Grouping texts in chunks of {block_size}",
)
train_dataset = lm_datasets["train"]
if data_args.validation_file is not None:
eval_dataset = lm_datasets["validation"]
else:
logger.info(
f"Validation file not found: using {data_args.validation_split_percentage}% of the dataset as validation as provided in data_args"
)
train_indices, val_indices = train_test_split(
list(range(len(train_dataset))), test_size=data_args.validation_split_percentage / 100
)
eval_dataset = train_dataset.select(val_indices)
train_dataset = train_dataset.select(train_indices)
if data_args.max_train_samples is not None:
train_dataset = train_dataset.select(range(data_args.max_train_samples))
if data_args.max_eval_samples is not None:
eval_dataset = eval_dataset.select(range(data_args.max_eval_samples))
# Log a few random samples from the training set:
for index in random.sample(range(len(train_dataset)), 3):
logger.info(f"Sample {index} of the training set: {train_dataset[index]}.")
# endregion
with training_args.strategy.scope():
# region Prepare model
if checkpoint is not None:
model = TFAutoModelForCausalLM.from_pretrained(checkpoint, config=config)
elif model_args.model_name_or_path:
model = TFAutoModelForCausalLM.from_pretrained(model_args.model_name_or_path, config=config)
else:
logger.info("Training new model from scratch")
model = TFAutoModelForCausalLM.from_config(config)
model.resize_token_embeddings(len(tokenizer))
# endregion
# region TF Dataset preparation
num_replicas = training_args.strategy.num_replicas_in_sync
data_collator = DefaultDataCollator(return_tensors="tf")
options = tf.data.Options()
options.experimental_distribute.auto_shard_policy = tf.data.experimental.AutoShardPolicy.OFF
tf_train_dataset = train_dataset.to_tf_dataset(
# labels are passed as input, as we will use the model's internal loss
columns=[col for col in train_dataset.features if col != "special_tokens_mask"],
shuffle=True,
batch_size=num_replicas * training_args.per_device_train_batch_size,
collate_fn=data_collator,
drop_remainder=True,
).with_options(options)
tf_eval_dataset = eval_dataset.to_tf_dataset(
# labels are passed as input, as we will use the model's internal loss
columns=[col for col in eval_dataset.features if col != "special_tokens_mask"],
shuffle=False,
batch_size=num_replicas * training_args.per_device_train_batch_size,
collate_fn=data_collator,
drop_remainder=True,
).with_options(options)
# endregion
# region Optimizer and loss
batches_per_epoch = len(train_dataset) // (num_replicas * training_args.per_device_train_batch_size)
# Bias and layernorm weights are automatically excluded from the decay
optimizer, lr_schedule = create_optimizer(
init_lr=training_args.learning_rate,
num_train_steps=int(training_args.num_train_epochs * batches_per_epoch),
num_warmup_steps=training_args.warmup_steps,
adam_beta1=training_args.adam_beta1,
adam_beta2=training_args.adam_beta2,
adam_epsilon=training_args.adam_epsilon,
weight_decay_rate=training_args.weight_decay,
)
# no user-specified loss = will use the model internal loss
model.compile(optimizer=optimizer)
# endregion
# region Training and validation
logger.info("***** Running training *****")
logger.info(f" Num examples = {len(train_dataset)}")
logger.info(f" Num Epochs = {training_args.num_train_epochs}")
logger.info(f" Instantaneous batch size per device = {training_args.per_device_train_batch_size}")
logger.info(f" Total train batch size = {training_args.per_device_train_batch_size * num_replicas}")
history = model.fit(
tf_train_dataset,
validation_data=tf_eval_dataset,
epochs=int(training_args.num_train_epochs),
steps_per_epoch=len(train_dataset) // (training_args.per_device_train_batch_size * num_replicas),
callbacks=[SavePretrainedCallback(output_dir=training_args.output_dir)],
)
try:
train_perplexity = math.exp(history.history["loss"][-1])
except OverflowError:
train_perplexity = math.inf
try:
validation_perplexity = math.exp(history.history["val_loss"][-1])
except OverflowError:
validation_perplexity = math.inf
logger.info(f" Final train loss: {history.history['loss'][-1]:.3f}")
logger.info(f" Final train perplexity: {train_perplexity:.3f}")
logger.info(f" Final validation loss: {history.history['val_loss'][-1]:.3f}")
logger.info(f" Final validation perplexity: {validation_perplexity:.3f}")
# endregion
if training_args.output_dir is not None:
model.save_pretrained(training_args.output_dir)
if training_args.push_to_hub:
# You'll probably want to include some of your own metadata here!
model.push_to_hub()
if __name__ == "__main__":
main()
| 22,652 | 42.563462 | 142 | py |
robust-transformers | robust-transformers-main/examples/legacy/run_transfo_xl.py | #!/usr/bin/env python
# coding=utf-8
# Copyright 2018 Google AI, Google Brain and Carnegie Mellon University Authors and the HuggingFace Inc. team.
# Copyright (c) 2018, NVIDIA CORPORATION. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
""" PyTorch Transformer XL model evaluation script.
Adapted from https://github.com/kimiyoung/transformer-xl.
In particular https://github.com/kimiyoung/transformer-xl/blob/master/pytorch/eval.py
This script with default values evaluates a pretrained Transformer-XL on WikiText 103
"""
import argparse
import logging
import math
import time
import torch
from transformers import TransfoXLCorpus, TransfoXLLMHeadModel
logging.basicConfig(
format="%(asctime)s - %(levelname)s - %(name)s - %(message)s", datefmt="%m/%d/%Y %H:%M:%S", level=logging.INFO
)
logger = logging.getLogger(__name__)
def main():
parser = argparse.ArgumentParser(description="PyTorch Transformer Language Model")
parser.add_argument("--model_name", type=str, default="transfo-xl-wt103", help="pretrained model name")
parser.add_argument(
"--split", type=str, default="test", choices=["all", "valid", "test"], help="which split to evaluate"
)
parser.add_argument("--batch_size", type=int, default=10, help="batch size")
parser.add_argument("--tgt_len", type=int, default=128, help="number of tokens to predict")
parser.add_argument("--ext_len", type=int, default=0, help="length of the extended context")
parser.add_argument("--mem_len", type=int, default=1600, help="length of the retained previous heads")
parser.add_argument("--clamp_len", type=int, default=1000, help="max positional embedding index")
parser.add_argument("--no_cuda", action="store_true", help="Do not use CUDA even though CUA is available")
parser.add_argument("--work_dir", type=str, required=True, help="path to the work_dir")
parser.add_argument("--no_log", action="store_true", help="do not log the eval result")
parser.add_argument("--same_length", action="store_true", help="set same length attention with masking")
parser.add_argument("--server_ip", type=str, default="", help="Can be used for distant debugging.")
parser.add_argument("--server_port", type=str, default="", help="Can be used for distant debugging.")
args = parser.parse_args()
assert args.ext_len >= 0, "extended context length must be non-negative"
if args.server_ip and args.server_port:
# Distant debugging - see https://code.visualstudio.com/docs/python/debugging#_attach-to-a-local-script
import ptvsd
print("Waiting for debugger attach")
ptvsd.enable_attach(address=(args.server_ip, args.server_port), redirect_output=True)
ptvsd.wait_for_attach()
device = torch.device("cuda" if torch.cuda.is_available() and not args.no_cuda else "cpu")
logger.info("device: {}".format(device))
# Load a pre-processed dataset
# You can also build the corpus yourself using TransfoXLCorpus methods
# The pre-processing involve computing word frequencies to prepare the Adaptive input and SoftMax
# and tokenizing the dataset
# The pre-processed corpus is a convertion (using the conversion script )
corpus = TransfoXLCorpus.from_pretrained(args.model_name)
va_iter = corpus.get_iterator("valid", args.batch_size, args.tgt_len, device=device, ext_len=args.ext_len)
te_iter = corpus.get_iterator("test", args.batch_size, args.tgt_len, device=device, ext_len=args.ext_len)
# Load a pre-trained model
model = TransfoXLLMHeadModel.from_pretrained(args.model_name)
model.to(device)
logger.info(
"Evaluating with bsz {} tgt_len {} ext_len {} mem_len {} clamp_len {}".format(
args.batch_size, args.tgt_len, args.ext_len, args.mem_len, args.clamp_len
)
)
model.reset_memory_length(args.mem_len)
if args.clamp_len > 0:
model.clamp_len = args.clamp_len
if args.same_length:
model.same_length = True
###############################################################################
# Evaluation code
###############################################################################
def evaluate(eval_iter):
# Turn on evaluation mode which disables dropout.
model.eval()
total_len, total_loss = 0, 0.0
start_time = time.time()
with torch.no_grad():
mems = None
for idx, (data, target, seq_len) in enumerate(eval_iter):
ret = model(data, lm_labels=target, mems=mems)
loss, _, mems = ret
loss = loss.mean()
total_loss += seq_len * loss.item()
total_len += seq_len
total_time = time.time() - start_time
logger.info("Time : {:.2f}s, {:.2f}ms/segment".format(total_time, 1000 * total_time / (idx + 1)))
return total_loss / total_len
# Run on test data.
if args.split == "all":
test_loss = evaluate(te_iter)
valid_loss = evaluate(va_iter)
elif args.split == "valid":
valid_loss = evaluate(va_iter)
test_loss = None
elif args.split == "test":
test_loss = evaluate(te_iter)
valid_loss = None
def format_log(loss, split):
log_str = "| {0} loss {1:5.2f} | {0} ppl {2:9.3f} ".format(split, loss, math.exp(loss))
return log_str
log_str = ""
if valid_loss is not None:
log_str += format_log(valid_loss, "valid")
if test_loss is not None:
log_str += format_log(test_loss, "test")
logger.info("=" * 100)
logger.info(log_str)
logger.info("=" * 100)
if __name__ == "__main__":
main()
| 6,205 | 41.506849 | 114 | py |
robust-transformers | robust-transformers-main/examples/legacy/run_swag.py | #!/usr/bin/env python
# coding=utf-8
# Copyright 2018 The Google AI Language Team Authors and The HuggingFace Inc. team.
# Copyright (c) 2018, NVIDIA CORPORATION. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
"""BERT finetuning runner.
Finetuning the library models for multiple choice on SWAG (Bert).
"""
import argparse
import csv
import glob
import logging
import os
import random
import numpy as np
import torch
from torch.utils.data import DataLoader, RandomSampler, SequentialSampler, TensorDataset
from torch.utils.data.distributed import DistributedSampler
from tqdm import tqdm, trange
import transformers
from transformers import (
WEIGHTS_NAME,
AdamW,
AutoConfig,
AutoModelForMultipleChoice,
AutoTokenizer,
get_linear_schedule_with_warmup,
)
from transformers.trainer_utils import is_main_process
try:
from torch.utils.tensorboard import SummaryWriter
except ImportError:
from tensorboardX import SummaryWriter
logger = logging.getLogger(__name__)
class SwagExample(object):
"""A single training/test example for the SWAG dataset."""
def __init__(self, swag_id, context_sentence, start_ending, ending_0, ending_1, ending_2, ending_3, label=None):
self.swag_id = swag_id
self.context_sentence = context_sentence
self.start_ending = start_ending
self.endings = [
ending_0,
ending_1,
ending_2,
ending_3,
]
self.label = label
def __str__(self):
return self.__repr__()
def __repr__(self):
attributes = [
"swag_id: {}".format(self.swag_id),
"context_sentence: {}".format(self.context_sentence),
"start_ending: {}".format(self.start_ending),
"ending_0: {}".format(self.endings[0]),
"ending_1: {}".format(self.endings[1]),
"ending_2: {}".format(self.endings[2]),
"ending_3: {}".format(self.endings[3]),
]
if self.label is not None:
attributes.append("label: {}".format(self.label))
return ", ".join(attributes)
class InputFeatures(object):
def __init__(self, example_id, choices_features, label):
self.example_id = example_id
self.choices_features = [
{"input_ids": input_ids, "input_mask": input_mask, "segment_ids": segment_ids}
for _, input_ids, input_mask, segment_ids in choices_features
]
self.label = label
def read_swag_examples(input_file, is_training=True):
with open(input_file, "r", encoding="utf-8") as f:
lines = list(csv.reader(f))
if is_training and lines[0][-1] != "label":
raise ValueError("For training, the input file must contain a label column.")
examples = [
SwagExample(
swag_id=line[2],
context_sentence=line[4],
start_ending=line[5], # in the swag dataset, the
# common beginning of each
# choice is stored in "sent2".
ending_0=line[7],
ending_1=line[8],
ending_2=line[9],
ending_3=line[10],
label=int(line[11]) if is_training else None,
)
for line in lines[1:] # we skip the line with the column names
]
return examples
def convert_examples_to_features(examples, tokenizer, max_seq_length, is_training):
"""Loads a data file into a list of `InputBatch`s."""
# Swag is a multiple choice task. To perform this task using Bert,
# we will use the formatting proposed in "Improving Language
# Understanding by Generative Pre-Training" and suggested by
# @jacobdevlin-google in this issue
# https://github.com/google-research/bert/issues/38.
#
# Each choice will correspond to a sample on which we run the
# inference. For a given Swag example, we will create the 4
# following inputs:
# - [CLS] context [SEP] choice_1 [SEP]
# - [CLS] context [SEP] choice_2 [SEP]
# - [CLS] context [SEP] choice_3 [SEP]
# - [CLS] context [SEP] choice_4 [SEP]
# The model will output a single value for each input. To get the
# final decision of the model, we will run a softmax over these 4
# outputs.
features = []
for example_index, example in tqdm(enumerate(examples)):
context_tokens = tokenizer.tokenize(example.context_sentence)
start_ending_tokens = tokenizer.tokenize(example.start_ending)
choices_features = []
for ending_index, ending in enumerate(example.endings):
# We create a copy of the context tokens in order to be
# able to shrink it according to ending_tokens
context_tokens_choice = context_tokens[:]
ending_tokens = start_ending_tokens + tokenizer.tokenize(ending)
# Modifies `context_tokens_choice` and `ending_tokens` in
# place so that the total length is less than the
# specified length. Account for [CLS], [SEP], [SEP] with
# "- 3"
_truncate_seq_pair(context_tokens_choice, ending_tokens, max_seq_length - 3)
tokens = ["[CLS]"] + context_tokens_choice + ["[SEP]"] + ending_tokens + ["[SEP]"]
segment_ids = [0] * (len(context_tokens_choice) + 2) + [1] * (len(ending_tokens) + 1)
input_ids = tokenizer.convert_tokens_to_ids(tokens)
input_mask = [1] * len(input_ids)
# Zero-pad up to the sequence length.
padding = [0] * (max_seq_length - len(input_ids))
input_ids += padding
input_mask += padding
segment_ids += padding
assert len(input_ids) == max_seq_length
assert len(input_mask) == max_seq_length
assert len(segment_ids) == max_seq_length
choices_features.append((tokens, input_ids, input_mask, segment_ids))
label = example.label
if example_index < 5:
logger.info("*** Example ***")
logger.info("swag_id: {}".format(example.swag_id))
for choice_idx, (tokens, input_ids, input_mask, segment_ids) in enumerate(choices_features):
logger.info("choice: {}".format(choice_idx))
logger.info("tokens: {}".format(" ".join(tokens)))
logger.info("input_ids: {}".format(" ".join(map(str, input_ids))))
logger.info("input_mask: {}".format(" ".join(map(str, input_mask))))
logger.info("segment_ids: {}".format(" ".join(map(str, segment_ids))))
if is_training:
logger.info("label: {}".format(label))
features.append(InputFeatures(example_id=example.swag_id, choices_features=choices_features, label=label))
return features
def _truncate_seq_pair(tokens_a, tokens_b, max_length):
"""Truncates a sequence pair in place to the maximum length."""
# This is a simple heuristic which will always truncate the longer sequence
# one token at a time. This makes more sense than truncating an equal percent
# of tokens from each, since if one sequence is very short then each token
# that's truncated likely contains more information than a longer sequence.
while True:
total_length = len(tokens_a) + len(tokens_b)
if total_length <= max_length:
break
if len(tokens_a) > len(tokens_b):
tokens_a.pop()
else:
tokens_b.pop()
def accuracy(out, labels):
outputs = np.argmax(out, axis=1)
return np.sum(outputs == labels)
def select_field(features, field):
return [[choice[field] for choice in feature.choices_features] for feature in features]
def set_seed(args):
random.seed(args.seed)
np.random.seed(args.seed)
torch.manual_seed(args.seed)
if args.n_gpu > 0:
torch.cuda.manual_seed_all(args.seed)
def load_and_cache_examples(args, tokenizer, evaluate=False, output_examples=False):
if args.local_rank not in [-1, 0]:
torch.distributed.barrier() # Make sure only the first process in distributed training process the dataset, and the others will use the cache
# Load data features from cache or dataset file
input_file = args.predict_file if evaluate else args.train_file
cached_features_file = os.path.join(
os.path.dirname(input_file),
"cached_{}_{}_{}".format(
"dev" if evaluate else "train",
list(filter(None, args.model_name_or_path.split("/"))).pop(),
str(args.max_seq_length),
),
)
if os.path.exists(cached_features_file) and not args.overwrite_cache and not output_examples:
logger.info("Loading features from cached file %s", cached_features_file)
features = torch.load(cached_features_file)
else:
logger.info("Creating features from dataset file at %s", input_file)
examples = read_swag_examples(input_file)
features = convert_examples_to_features(examples, tokenizer, args.max_seq_length, not evaluate)
if args.local_rank in [-1, 0]:
logger.info("Saving features into cached file %s", cached_features_file)
torch.save(features, cached_features_file)
if args.local_rank == 0:
torch.distributed.barrier() # Make sure only the first process in distributed training process the dataset, and the others will use the cache
# Convert to Tensors and build dataset
all_input_ids = torch.tensor(select_field(features, "input_ids"), dtype=torch.long)
all_input_mask = torch.tensor(select_field(features, "input_mask"), dtype=torch.long)
all_segment_ids = torch.tensor(select_field(features, "segment_ids"), dtype=torch.long)
all_label = torch.tensor([f.label for f in features], dtype=torch.long)
if evaluate:
dataset = TensorDataset(all_input_ids, all_input_mask, all_segment_ids, all_label)
else:
dataset = TensorDataset(all_input_ids, all_input_mask, all_segment_ids, all_label)
if output_examples:
return dataset, examples, features
return dataset
def train(args, train_dataset, model, tokenizer):
"""Train the model"""
if args.local_rank in [-1, 0]:
tb_writer = SummaryWriter()
args.train_batch_size = args.per_gpu_train_batch_size * max(1, args.n_gpu)
train_sampler = RandomSampler(train_dataset) if args.local_rank == -1 else DistributedSampler(train_dataset)
train_dataloader = DataLoader(train_dataset, sampler=train_sampler, batch_size=args.train_batch_size)
if args.max_steps > 0:
t_total = args.max_steps
args.num_train_epochs = args.max_steps // (len(train_dataloader) // args.gradient_accumulation_steps) + 1
else:
t_total = len(train_dataloader) // args.gradient_accumulation_steps * args.num_train_epochs
# Prepare optimizer and schedule (linear warmup and decay)
no_decay = ["bias", "LayerNorm.weight"]
optimizer_grouped_parameters = [
{
"params": [p for n, p in model.named_parameters() if not any(nd in n for nd in no_decay)],
"weight_decay": args.weight_decay,
},
{"params": [p for n, p in model.named_parameters() if any(nd in n for nd in no_decay)], "weight_decay": 0.0},
]
optimizer = AdamW(optimizer_grouped_parameters, lr=args.learning_rate, eps=args.adam_epsilon)
scheduler = get_linear_schedule_with_warmup(
optimizer, num_warmup_steps=args.warmup_steps, num_training_steps=t_total
)
if args.fp16:
try:
from apex import amp
except ImportError:
raise ImportError("Please install apex from https://www.github.com/nvidia/apex to use fp16 training.")
model, optimizer = amp.initialize(model, optimizer, opt_level=args.fp16_opt_level)
# multi-gpu training (should be after apex fp16 initialization)
if args.n_gpu > 1:
model = torch.nn.DataParallel(model)
# Distributed training (should be after apex fp16 initialization)
if args.local_rank != -1:
model = torch.nn.parallel.DistributedDataParallel(
model, device_ids=[args.local_rank], output_device=args.local_rank, find_unused_parameters=True
)
# Train!
logger.info("***** Running training *****")
logger.info(" Num examples = %d", len(train_dataset))
logger.info(" Num Epochs = %d", args.num_train_epochs)
logger.info(" Instantaneous batch size per GPU = %d", args.per_gpu_train_batch_size)
logger.info(
" Total train batch size (w. parallel, distributed & accumulation) = %d",
args.train_batch_size
* args.gradient_accumulation_steps
* (torch.distributed.get_world_size() if args.local_rank != -1 else 1),
)
logger.info(" Gradient Accumulation steps = %d", args.gradient_accumulation_steps)
logger.info(" Total optimization steps = %d", t_total)
global_step = 0
tr_loss, logging_loss = 0.0, 0.0
model.zero_grad()
train_iterator = trange(int(args.num_train_epochs), desc="Epoch", disable=args.local_rank not in [-1, 0])
set_seed(args) # Added here for reproductibility
for _ in train_iterator:
epoch_iterator = tqdm(train_dataloader, desc="Iteration", disable=args.local_rank not in [-1, 0])
for step, batch in enumerate(epoch_iterator):
model.train()
batch = tuple(t.to(args.device) for t in batch)
inputs = {
"input_ids": batch[0],
"attention_mask": batch[1],
# 'token_type_ids': None if args.model_type == 'xlm' else batch[2],
"token_type_ids": batch[2],
"labels": batch[3],
}
# if args.model_type in ['xlnet', 'xlm']:
# inputs.update({'cls_index': batch[5],
# 'p_mask': batch[6]})
outputs = model(**inputs)
loss = outputs[0] # model outputs are always tuple in transformers (see doc)
if args.n_gpu > 1:
loss = loss.mean() # mean() to average on multi-gpu parallel (not distributed) training
if args.gradient_accumulation_steps > 1:
loss = loss / args.gradient_accumulation_steps
if args.fp16:
with amp.scale_loss(loss, optimizer) as scaled_loss:
scaled_loss.backward()
torch.nn.utils.clip_grad_norm_(amp.master_params(optimizer), args.max_grad_norm)
else:
loss.backward()
torch.nn.utils.clip_grad_norm_(model.parameters(), args.max_grad_norm)
tr_loss += loss.item()
if (step + 1) % args.gradient_accumulation_steps == 0:
optimizer.step()
scheduler.step() # Update learning rate schedule
model.zero_grad()
global_step += 1
if args.local_rank in [-1, 0] and args.logging_steps > 0 and global_step % args.logging_steps == 0:
# Log metrics
if (
args.local_rank == -1 and args.evaluate_during_training
): # Only evaluate when single GPU otherwise metrics may not average well
results = evaluate(args, model, tokenizer)
for key, value in results.items():
tb_writer.add_scalar("eval_{}".format(key), value, global_step)
tb_writer.add_scalar("lr", scheduler.get_lr()[0], global_step)
tb_writer.add_scalar("loss", (tr_loss - logging_loss) / args.logging_steps, global_step)
logging_loss = tr_loss
if args.local_rank in [-1, 0] and args.save_steps > 0 and global_step % args.save_steps == 0:
# Save model checkpoint
output_dir = os.path.join(args.output_dir, "checkpoint-{}".format(global_step))
model_to_save = (
model.module if hasattr(model, "module") else model
) # Take care of distributed/parallel training
model_to_save.save_pretrained(output_dir)
tokenizer.save_vocabulary(output_dir)
torch.save(args, os.path.join(output_dir, "training_args.bin"))
logger.info("Saving model checkpoint to %s", output_dir)
if args.max_steps > 0 and global_step > args.max_steps:
epoch_iterator.close()
break
if args.max_steps > 0 and global_step > args.max_steps:
train_iterator.close()
break
if args.local_rank in [-1, 0]:
tb_writer.close()
return global_step, tr_loss / global_step
def evaluate(args, model, tokenizer, prefix=""):
dataset, examples, features = load_and_cache_examples(args, tokenizer, evaluate=True, output_examples=True)
if not os.path.exists(args.output_dir) and args.local_rank in [-1, 0]:
os.makedirs(args.output_dir)
args.eval_batch_size = args.per_gpu_eval_batch_size * max(1, args.n_gpu)
# Note that DistributedSampler samples randomly
eval_sampler = SequentialSampler(dataset) if args.local_rank == -1 else DistributedSampler(dataset)
eval_dataloader = DataLoader(dataset, sampler=eval_sampler, batch_size=args.eval_batch_size)
# Eval!
logger.info("***** Running evaluation {} *****".format(prefix))
logger.info(" Num examples = %d", len(dataset))
logger.info(" Batch size = %d", args.eval_batch_size)
eval_loss, eval_accuracy = 0, 0
nb_eval_steps, nb_eval_examples = 0, 0
for batch in tqdm(eval_dataloader, desc="Evaluating"):
model.eval()
batch = tuple(t.to(args.device) for t in batch)
with torch.no_grad():
inputs = {
"input_ids": batch[0],
"attention_mask": batch[1],
# 'token_type_ids': None if args.model_type == 'xlm' else batch[2] # XLM don't use segment_ids
"token_type_ids": batch[2],
"labels": batch[3],
}
# if args.model_type in ['xlnet', 'xlm']:
# inputs.update({'cls_index': batch[4],
# 'p_mask': batch[5]})
outputs = model(**inputs)
tmp_eval_loss, logits = outputs[:2]
eval_loss += tmp_eval_loss.mean().item()
logits = logits.detach().cpu().numpy()
label_ids = inputs["labels"].to("cpu").numpy()
tmp_eval_accuracy = accuracy(logits, label_ids)
eval_accuracy += tmp_eval_accuracy
nb_eval_steps += 1
nb_eval_examples += inputs["input_ids"].size(0)
eval_loss = eval_loss / nb_eval_steps
eval_accuracy = eval_accuracy / nb_eval_examples
result = {"eval_loss": eval_loss, "eval_accuracy": eval_accuracy}
output_eval_file = os.path.join(args.output_dir, "eval_results.txt")
with open(output_eval_file, "w") as writer:
logger.info("***** Eval results *****")
for key in sorted(result.keys()):
logger.info("%s = %s", key, str(result[key]))
writer.write("%s = %s\n" % (key, str(result[key])))
return result
def main():
parser = argparse.ArgumentParser()
# Required parameters
parser.add_argument(
"--train_file", default=None, type=str, required=True, help="SWAG csv for training. E.g., train.csv"
)
parser.add_argument(
"--predict_file",
default=None,
type=str,
required=True,
help="SWAG csv for predictions. E.g., val.csv or test.csv",
)
parser.add_argument(
"--model_name_or_path",
default=None,
type=str,
required=True,
help="Path to pretrained model or model identifier from huggingface.co/models",
)
parser.add_argument(
"--output_dir",
default=None,
type=str,
required=True,
help="The output directory where the model checkpoints and predictions will be written.",
)
# Other parameters
parser.add_argument(
"--config_name", default="", type=str, help="Pretrained config name or path if not the same as model_name"
)
parser.add_argument(
"--tokenizer_name",
default="",
type=str,
help="Pretrained tokenizer name or path if not the same as model_name",
)
parser.add_argument(
"--max_seq_length",
default=384,
type=int,
help="The maximum total input sequence length after tokenization. Sequences "
"longer than this will be truncated, and sequences shorter than this will be padded.",
)
parser.add_argument("--do_train", action="store_true", help="Whether to run training.")
parser.add_argument("--do_eval", action="store_true", help="Whether to run eval on the dev set.")
parser.add_argument(
"--evaluate_during_training", action="store_true", help="Rul evaluation during training at each logging step."
)
parser.add_argument("--per_gpu_train_batch_size", default=8, type=int, help="Batch size per GPU/CPU for training.")
parser.add_argument(
"--per_gpu_eval_batch_size", default=8, type=int, help="Batch size per GPU/CPU for evaluation."
)
parser.add_argument("--learning_rate", default=5e-5, type=float, help="The initial learning rate for Adam.")
parser.add_argument(
"--gradient_accumulation_steps",
type=int,
default=1,
help="Number of updates steps to accumulate before performing a backward/update pass.",
)
parser.add_argument("--weight_decay", default=0.0, type=float, help="Weight deay if we apply some.")
parser.add_argument("--adam_epsilon", default=1e-8, type=float, help="Epsilon for Adam optimizer.")
parser.add_argument("--max_grad_norm", default=1.0, type=float, help="Max gradient norm.")
parser.add_argument(
"--num_train_epochs", default=3.0, type=float, help="Total number of training epochs to perform."
)
parser.add_argument(
"--max_steps",
default=-1,
type=int,
help="If > 0: set total number of training steps to perform. Override num_train_epochs.",
)
parser.add_argument("--warmup_steps", default=0, type=int, help="Linear warmup over warmup_steps.")
parser.add_argument("--logging_steps", type=int, default=50, help="Log every X updates steps.")
parser.add_argument("--save_steps", type=int, default=50, help="Save checkpoint every X updates steps.")
parser.add_argument(
"--eval_all_checkpoints",
action="store_true",
help="Evaluate all checkpoints starting with the same prefix as model_name ending and ending with step number",
)
parser.add_argument("--no_cuda", action="store_true", help="Whether not to use CUDA when available")
parser.add_argument(
"--overwrite_output_dir", action="store_true", help="Overwrite the content of the output directory"
)
parser.add_argument(
"--overwrite_cache", action="store_true", help="Overwrite the cached training and evaluation sets"
)
parser.add_argument("--seed", type=int, default=42, help="random seed for initialization")
parser.add_argument("--local_rank", type=int, default=-1, help="local_rank for distributed training on gpus")
parser.add_argument(
"--fp16",
action="store_true",
help="Whether to use 16-bit (mixed) precision (through NVIDIA apex) instead of 32-bit",
)
parser.add_argument(
"--fp16_opt_level",
type=str,
default="O1",
help="For fp16: Apex AMP optimization level selected in ['O0', 'O1', 'O2', and 'O3']."
"See details at https://nvidia.github.io/apex/amp.html",
)
parser.add_argument("--server_ip", type=str, default="", help="Can be used for distant debugging.")
parser.add_argument("--server_port", type=str, default="", help="Can be used for distant debugging.")
args = parser.parse_args()
if (
os.path.exists(args.output_dir)
and os.listdir(args.output_dir)
and args.do_train
and not args.overwrite_output_dir
):
raise ValueError(
"Output directory ({}) already exists and is not empty. Use --overwrite_output_dir to overcome.".format(
args.output_dir
)
)
# Setup distant debugging if needed
if args.server_ip and args.server_port:
# Distant debugging - see https://code.visualstudio.com/docs/python/debugging#_attach-to-a-local-script
import ptvsd
print("Waiting for debugger attach")
ptvsd.enable_attach(address=(args.server_ip, args.server_port), redirect_output=True)
ptvsd.wait_for_attach()
# Setup CUDA, GPU & distributed training
if args.local_rank == -1 or args.no_cuda:
device = torch.device("cuda" if torch.cuda.is_available() and not args.no_cuda else "cpu")
args.n_gpu = 0 if args.no_cuda else torch.cuda.device_count()
else: # Initializes the distributed backend which will take care of sychronizing nodes/GPUs
torch.cuda.set_device(args.local_rank)
device = torch.device("cuda", args.local_rank)
torch.distributed.init_process_group(backend="nccl")
args.n_gpu = 1
args.device = device
# Setup logging
logging.basicConfig(
format="%(asctime)s - %(levelname)s - %(name)s - %(message)s",
datefmt="%m/%d/%Y %H:%M:%S",
level=logging.INFO if args.local_rank in [-1, 0] else logging.WARN,
)
logger.warning(
"Process rank: %s, device: %s, n_gpu: %s, distributed training: %s, 16-bits training: %s",
args.local_rank,
device,
args.n_gpu,
bool(args.local_rank != -1),
args.fp16,
)
# Set the verbosity to info of the Transformers logger (on main process only):
if is_main_process(args.local_rank):
transformers.utils.logging.set_verbosity_info()
transformers.utils.logging.enable_default_handler()
transformers.utils.logging.enable_explicit_format()
# Set seed
set_seed(args)
# Load pretrained model and tokenizer
if args.local_rank not in [-1, 0]:
torch.distributed.barrier() # Make sure only the first process in distributed training will download model & vocab
config = AutoConfig.from_pretrained(args.config_name if args.config_name else args.model_name_or_path)
tokenizer = AutoTokenizer.from_pretrained(
args.tokenizer_name if args.tokenizer_name else args.model_name_or_path,
)
model = AutoModelForMultipleChoice.from_pretrained(
args.model_name_or_path, from_tf=bool(".ckpt" in args.model_name_or_path), config=config
)
if args.local_rank == 0:
torch.distributed.barrier() # Make sure only the first process in distributed training will download model & vocab
model.to(args.device)
logger.info("Training/evaluation parameters %s", args)
# Training
if args.do_train:
train_dataset = load_and_cache_examples(args, tokenizer, evaluate=False, output_examples=False)
global_step, tr_loss = train(args, train_dataset, model, tokenizer)
logger.info(" global_step = %s, average loss = %s", global_step, tr_loss)
# Save the trained model and the tokenizer
if args.local_rank == -1 or torch.distributed.get_rank() == 0:
logger.info("Saving model checkpoint to %s", args.output_dir)
# Save a trained model, configuration and tokenizer using `save_pretrained()`.
# They can then be reloaded using `from_pretrained()`
model_to_save = (
model.module if hasattr(model, "module") else model
) # Take care of distributed/parallel training
model_to_save.save_pretrained(args.output_dir)
tokenizer.save_pretrained(args.output_dir)
# Good practice: save your training arguments together with the trained model
torch.save(args, os.path.join(args.output_dir, "training_args.bin"))
# Load a trained model and vocabulary that you have fine-tuned
model = AutoModelForMultipleChoice.from_pretrained(args.output_dir)
tokenizer = AutoTokenizer.from_pretrained(args.output_dir)
model.to(args.device)
# Evaluation - we can ask to evaluate all the checkpoints (sub-directories) in a directory
results = {}
if args.do_eval and args.local_rank in [-1, 0]:
if args.do_train:
checkpoints = [args.output_dir]
else:
# if do_train is False and do_eval is true, load model directly from pretrained.
checkpoints = [args.model_name_or_path]
if args.eval_all_checkpoints:
checkpoints = list(
os.path.dirname(c) for c in sorted(glob.glob(args.output_dir + "/**/" + WEIGHTS_NAME, recursive=True))
)
logger.info("Evaluate the following checkpoints: %s", checkpoints)
for checkpoint in checkpoints:
# Reload the model
global_step = checkpoint.split("-")[-1] if len(checkpoints) > 1 else ""
model = AutoModelForMultipleChoice.from_pretrained(checkpoint)
tokenizer = AutoTokenizer.from_pretrained(checkpoint)
model.to(args.device)
# Evaluate
result = evaluate(args, model, tokenizer, prefix=global_step)
result = dict((k + ("_{}".format(global_step) if global_step else ""), v) for k, v in result.items())
results.update(result)
logger.info("Results: {}".format(results))
return results
if __name__ == "__main__":
main()
| 30,163 | 40.836338 | 150 | py |
robust-transformers | robust-transformers-main/examples/legacy/run_language_modeling.py | #!/usr/bin/env python
# coding=utf-8
# Copyright 2018 The Google AI Language Team Authors and The HuggingFace Inc. team.
# Copyright (c) 2018, NVIDIA CORPORATION. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
"""
Fine-tuning the library models for language modeling on a text file (GPT, GPT-2, CTRL, BERT, RoBERTa, XLNet).
GPT, GPT-2 and CTRL are fine-tuned using a causal language modeling (CLM) loss. BERT and RoBERTa are fine-tuned
using a masked language modeling (MLM) loss. XLNet is fine-tuned using a permutation language modeling (PLM) loss.
"""
import logging
import math
import os
from dataclasses import dataclass, field
from glob import glob
from typing import Optional
from torch.utils.data import ConcatDataset
import transformers
from transformers import (
CONFIG_MAPPING,
MODEL_WITH_LM_HEAD_MAPPING,
AutoConfig,
AutoModelWithLMHead,
AutoTokenizer,
DataCollatorForLanguageModeling,
DataCollatorForPermutationLanguageModeling,
DataCollatorForWholeWordMask,
HfArgumentParser,
LineByLineTextDataset,
LineByLineWithRefDataset,
PreTrainedTokenizer,
TextDataset,
Trainer,
TrainingArguments,
set_seed,
)
from transformers.trainer_utils import is_main_process
logger = logging.getLogger(__name__)
MODEL_CONFIG_CLASSES = list(MODEL_WITH_LM_HEAD_MAPPING.keys())
MODEL_TYPES = tuple(conf.model_type for conf in MODEL_CONFIG_CLASSES)
@dataclass
class ModelArguments:
"""
Arguments pertaining to which model/config/tokenizer we are going to fine-tune, or train from scratch.
"""
model_name_or_path: Optional[str] = field(
default=None,
metadata={
"help": "The model checkpoint for weights initialization. Leave None if you want to train a model from scratch."
},
)
model_type: Optional[str] = field(
default=None,
metadata={"help": "If training from scratch, pass a model type from the list: " + ", ".join(MODEL_TYPES)},
)
config_name: Optional[str] = field(
default=None, metadata={"help": "Pretrained config name or path if not the same as model_name"}
)
tokenizer_name: Optional[str] = field(
default=None, metadata={"help": "Pretrained tokenizer name or path if not the same as model_name"}
)
cache_dir: Optional[str] = field(
default=None,
metadata={"help": "Where do you want to store the pretrained models downloaded from huggingface.co"},
)
@dataclass
class DataTrainingArguments:
"""
Arguments pertaining to what data we are going to input our model for training and eval.
"""
train_data_file: Optional[str] = field(
default=None, metadata={"help": "The input training data file (a text file)."}
)
train_data_files: Optional[str] = field(
default=None,
metadata={
"help": "The input training data files (multiple files in glob format). "
"Very often splitting large files to smaller files can prevent tokenizer going out of memory"
},
)
eval_data_file: Optional[str] = field(
default=None,
metadata={"help": "An optional input evaluation data file to evaluate the perplexity on (a text file)."},
)
train_ref_file: Optional[str] = field(
default=None,
metadata={"help": "An optional input train ref data file for whole word mask in Chinese."},
)
eval_ref_file: Optional[str] = field(
default=None,
metadata={"help": "An optional input eval ref data file for whole word mask in Chinese."},
)
line_by_line: bool = field(
default=False,
metadata={"help": "Whether distinct lines of text in the dataset are to be handled as distinct sequences."},
)
mlm: bool = field(
default=False, metadata={"help": "Train with masked-language modeling loss instead of language modeling."}
)
whole_word_mask: bool = field(default=False, metadata={"help": "Whether ot not to use whole word mask."})
mlm_probability: float = field(
default=0.15, metadata={"help": "Ratio of tokens to mask for masked language modeling loss"}
)
plm_probability: float = field(
default=1 / 6,
metadata={
"help": "Ratio of length of a span of masked tokens to surrounding context length for permutation language modeling."
},
)
max_span_length: int = field(
default=5, metadata={"help": "Maximum length of a span of masked tokens for permutation language modeling."}
)
block_size: int = field(
default=-1,
metadata={
"help": "Optional input sequence length after tokenization."
"The training dataset will be truncated in block of this size for training."
"Default to the model max input length for single sentence inputs (take into account special tokens)."
},
)
overwrite_cache: bool = field(
default=False, metadata={"help": "Overwrite the cached training and evaluation sets"}
)
def get_dataset(
args: DataTrainingArguments,
tokenizer: PreTrainedTokenizer,
evaluate: bool = False,
cache_dir: Optional[str] = None,
):
def _dataset(file_path, ref_path=None):
if args.line_by_line:
if ref_path is not None:
if not args.whole_word_mask or not args.mlm:
raise ValueError("You need to set world whole masking and mlm to True for Chinese Whole Word Mask")
return LineByLineWithRefDataset(
tokenizer=tokenizer,
file_path=file_path,
block_size=args.block_size,
ref_path=ref_path,
)
return LineByLineTextDataset(tokenizer=tokenizer, file_path=file_path, block_size=args.block_size)
else:
return TextDataset(
tokenizer=tokenizer,
file_path=file_path,
block_size=args.block_size,
overwrite_cache=args.overwrite_cache,
cache_dir=cache_dir,
)
if evaluate:
return _dataset(args.eval_data_file, args.eval_ref_file)
elif args.train_data_files:
return ConcatDataset([_dataset(f) for f in glob(args.train_data_files)])
else:
return _dataset(args.train_data_file, args.train_ref_file)
def main():
# See all possible arguments in src/transformers/training_args.py
# or by passing the --help flag to this script.
# We now keep distinct sets of args, for a cleaner separation of concerns.
parser = HfArgumentParser((ModelArguments, DataTrainingArguments, TrainingArguments))
model_args, data_args, training_args = parser.parse_args_into_dataclasses()
if data_args.eval_data_file is None and training_args.do_eval:
raise ValueError(
"Cannot do evaluation without an evaluation data file. Either supply a file to --eval_data_file "
"or remove the --do_eval argument."
)
if (
os.path.exists(training_args.output_dir)
and os.listdir(training_args.output_dir)
and training_args.do_train
and not training_args.overwrite_output_dir
):
raise ValueError(
f"Output directory ({training_args.output_dir}) already exists and is not empty. Use --overwrite_output_dir to overcome."
)
# Setup logging
logging.basicConfig(
format="%(asctime)s - %(levelname)s - %(name)s - %(message)s",
datefmt="%m/%d/%Y %H:%M:%S",
level=logging.INFO if training_args.local_rank in [-1, 0] else logging.WARN,
)
logger.warning(
"Process rank: %s, device: %s, n_gpu: %s, distributed training: %s, 16-bits training: %s",
training_args.local_rank,
training_args.device,
training_args.n_gpu,
bool(training_args.local_rank != -1),
training_args.fp16,
)
# Set the verbosity to info of the Transformers logger (on main process only):
if is_main_process(training_args.local_rank):
transformers.utils.logging.set_verbosity_info()
transformers.utils.logging.enable_default_handler()
transformers.utils.logging.enable_explicit_format()
logger.info("Training/evaluation parameters %s", training_args)
# Set seed
set_seed(training_args.seed)
# Load pretrained model and tokenizer
#
# Distributed training:
# The .from_pretrained methods guarantee that only one local process can concurrently
# download model & vocab.
if model_args.config_name:
config = AutoConfig.from_pretrained(model_args.config_name, cache_dir=model_args.cache_dir)
elif model_args.model_name_or_path:
config = AutoConfig.from_pretrained(model_args.model_name_or_path, cache_dir=model_args.cache_dir)
else:
config = CONFIG_MAPPING[model_args.model_type]()
logger.warning("You are instantiating a new config instance from scratch.")
if model_args.tokenizer_name:
tokenizer = AutoTokenizer.from_pretrained(model_args.tokenizer_name, cache_dir=model_args.cache_dir)
elif model_args.model_name_or_path:
tokenizer = AutoTokenizer.from_pretrained(model_args.model_name_or_path, cache_dir=model_args.cache_dir)
else:
raise ValueError(
"You are instantiating a new tokenizer from scratch. This is not supported, but you can do it from another script, save it,"
"and load it from here, using --tokenizer_name"
)
if model_args.model_name_or_path:
model = AutoModelWithLMHead.from_pretrained(
model_args.model_name_or_path,
from_tf=bool(".ckpt" in model_args.model_name_or_path),
config=config,
cache_dir=model_args.cache_dir,
)
else:
logger.info("Training new model from scratch")
model = AutoModelWithLMHead.from_config(config)
model.resize_token_embeddings(len(tokenizer))
if config.model_type in ["bert", "roberta", "distilbert", "camembert"] and not data_args.mlm:
raise ValueError(
"BERT and RoBERTa-like models do not have LM heads but masked LM heads. They must be run using the"
"--mlm flag (masked language modeling)."
)
if data_args.block_size <= 0:
data_args.block_size = tokenizer.max_len
# Our input block size will be the max possible for the model
else:
data_args.block_size = min(data_args.block_size, tokenizer.max_len)
# Get datasets
train_dataset = (
get_dataset(data_args, tokenizer=tokenizer, cache_dir=model_args.cache_dir) if training_args.do_train else None
)
eval_dataset = (
get_dataset(data_args, tokenizer=tokenizer, evaluate=True, cache_dir=model_args.cache_dir)
if training_args.do_eval
else None
)
if config.model_type == "xlnet":
data_collator = DataCollatorForPermutationLanguageModeling(
tokenizer=tokenizer,
plm_probability=data_args.plm_probability,
max_span_length=data_args.max_span_length,
)
else:
if data_args.mlm and data_args.whole_word_mask:
data_collator = DataCollatorForWholeWordMask(
tokenizer=tokenizer, mlm_probability=data_args.mlm_probability
)
else:
data_collator = DataCollatorForLanguageModeling(
tokenizer=tokenizer, mlm=data_args.mlm, mlm_probability=data_args.mlm_probability
)
# Initialize our Trainer
trainer = Trainer(
model=model,
args=training_args,
data_collator=data_collator,
train_dataset=train_dataset,
eval_dataset=eval_dataset,
prediction_loss_only=True,
)
# Training
if training_args.do_train:
model_path = (
model_args.model_name_or_path
if model_args.model_name_or_path is not None and os.path.isdir(model_args.model_name_or_path)
else None
)
trainer.train(model_path=model_path)
trainer.save_model()
# For convenience, we also re-save the tokenizer to the same directory,
# so that you can share your model easily on huggingface.co/models =)
if trainer.is_world_master():
tokenizer.save_pretrained(training_args.output_dir)
# Evaluation
results = {}
if training_args.do_eval:
logger.info("*** Evaluate ***")
eval_output = trainer.evaluate()
perplexity = math.exp(eval_output["eval_loss"])
result = {"perplexity": perplexity}
output_eval_file = os.path.join(training_args.output_dir, "eval_results_lm.txt")
if trainer.is_world_master():
with open(output_eval_file, "w") as writer:
logger.info("***** Eval results *****")
for key in sorted(result.keys()):
logger.info(" %s = %s", key, str(result[key]))
writer.write("%s = %s\n" % (key, str(result[key])))
results.update(result)
return results
def _mp_fn(index):
# For xla_spawn (TPUs)
main()
if __name__ == "__main__":
main()
| 13,704 | 36.547945 | 136 | py |
robust-transformers | robust-transformers-main/examples/legacy/run_openai_gpt.py | #!/usr/bin/env python
# coding=utf-8
# Copyright 2018 Google AI, Google Brain and Carnegie Mellon University Authors and the HuggingFace Inc. team.
# Copyright (c) 2018, NVIDIA CORPORATION. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
""" OpenAI GPT model fine-tuning script.
Adapted from https://github.com/huggingface/pytorch-openai-transformer-lm/blob/master/train.py
It self adapted from https://github.com/openai/finetune-transformer-lm/blob/master/train.py
This script with default values fine-tunes and evaluate a pretrained OpenAI GPT on the RocStories dataset:
python run_openai_gpt.py \
--model_name openai-gpt \
--do_train \
--do_eval \
--train_dataset "$ROC_STORIES_DIR/cloze_test_val__spring2016 - cloze_test_ALL_val.csv" \
--eval_dataset "$ROC_STORIES_DIR/cloze_test_test__spring2016 - cloze_test_ALL_test.csv" \
--output_dir ../log \
--train_batch_size 16 \
"""
import argparse
import csv
import logging
import os
import random
import numpy as np
import torch
from torch.utils.data import DataLoader, RandomSampler, SequentialSampler, TensorDataset
from tqdm import tqdm, trange
from transformers import (
CONFIG_NAME,
WEIGHTS_NAME,
AdamW,
OpenAIGPTDoubleHeadsModel,
OpenAIGPTTokenizer,
get_linear_schedule_with_warmup,
)
logging.basicConfig(
format="%(asctime)s - %(levelname)s - %(name)s - %(message)s", datefmt="%m/%d/%Y %H:%M:%S", level=logging.INFO
)
logger = logging.getLogger(__name__)
def accuracy(out, labels):
outputs = np.argmax(out, axis=1)
return np.sum(outputs == labels)
def load_rocstories_dataset(dataset_path):
"""Output a list of tuples(story, 1st continuation, 2nd continuation, label)"""
with open(dataset_path, encoding="utf_8") as f:
f = csv.reader(f)
output = []
next(f) # skip the first line
for line in tqdm(f):
output.append((" ".join(line[1:5]), line[5], line[6], int(line[-1]) - 1))
return output
def pre_process_datasets(encoded_datasets, input_len, cap_length, start_token, delimiter_token, clf_token):
"""Pre-process datasets containing lists of tuples(story, 1st continuation, 2nd continuation, label)
To Transformer inputs of shape (n_batch, n_alternative, length) comprising for each batch, continuation:
input_ids[batch, alternative, :] = [start_token] + story[:cap_length] + [delimiter_token] + cont1[:cap_length] + [clf_token]
"""
tensor_datasets = []
for dataset in encoded_datasets:
n_batch = len(dataset)
input_ids = np.zeros((n_batch, 2, input_len), dtype=np.int64)
mc_token_ids = np.zeros((n_batch, 2), dtype=np.int64)
lm_labels = np.full((n_batch, 2, input_len), fill_value=-100, dtype=np.int64)
mc_labels = np.zeros((n_batch,), dtype=np.int64)
for (
i,
(story, cont1, cont2, mc_label),
) in enumerate(dataset):
with_cont1 = [start_token] + story[:cap_length] + [delimiter_token] + cont1[:cap_length] + [clf_token]
with_cont2 = [start_token] + story[:cap_length] + [delimiter_token] + cont2[:cap_length] + [clf_token]
input_ids[i, 0, : len(with_cont1)] = with_cont1
input_ids[i, 1, : len(with_cont2)] = with_cont2
mc_token_ids[i, 0] = len(with_cont1) - 1
mc_token_ids[i, 1] = len(with_cont2) - 1
lm_labels[i, 0, : len(with_cont1)] = with_cont1
lm_labels[i, 1, : len(with_cont2)] = with_cont2
mc_labels[i] = mc_label
all_inputs = (input_ids, mc_token_ids, lm_labels, mc_labels)
tensor_datasets.append(tuple(torch.tensor(t) for t in all_inputs))
return tensor_datasets
def main():
parser = argparse.ArgumentParser()
parser.add_argument("--model_name", type=str, default="openai-gpt", help="pretrained model name")
parser.add_argument("--do_train", action="store_true", help="Whether to run training.")
parser.add_argument("--do_eval", action="store_true", help="Whether to run eval on the dev set.")
parser.add_argument(
"--output_dir",
default=None,
type=str,
required=True,
help="The output directory where the model predictions and checkpoints will be written.",
)
parser.add_argument("--train_dataset", type=str, default="")
parser.add_argument("--eval_dataset", type=str, default="")
parser.add_argument("--seed", type=int, default=42)
parser.add_argument("--num_train_epochs", type=int, default=3)
parser.add_argument("--train_batch_size", type=int, default=8)
parser.add_argument("--eval_batch_size", type=int, default=16)
parser.add_argument("--adam_epsilon", default=1e-8, type=float, help="Epsilon for Adam optimizer.")
parser.add_argument("--max_grad_norm", type=int, default=1)
parser.add_argument(
"--max_steps",
default=-1,
type=int,
help="If > 0: set total number of training \
steps to perform. Override num_train_epochs.",
)
parser.add_argument(
"--gradient_accumulation_steps",
type=int,
default=1,
help="Number of updates steps to accumulate before\
performing a backward/update pass.",
)
parser.add_argument("--learning_rate", type=float, default=6.25e-5)
parser.add_argument("--warmup_steps", default=0, type=int, help="Linear warmup over warmup_steps.")
parser.add_argument("--lr_schedule", type=str, default="warmup_linear")
parser.add_argument("--weight_decay", type=float, default=0.01)
parser.add_argument("--lm_coef", type=float, default=0.9)
parser.add_argument("--n_valid", type=int, default=374)
parser.add_argument("--server_ip", type=str, default="", help="Can be used for distant debugging.")
parser.add_argument("--server_port", type=str, default="", help="Can be used for distant debugging.")
args = parser.parse_args()
print(args)
if args.server_ip and args.server_port:
# Distant debugging - see https://code.visualstudio.com/docs/python/debugging#_attach-to-a-local-script
import ptvsd
print("Waiting for debugger attach")
ptvsd.enable_attach(address=(args.server_ip, args.server_port), redirect_output=True)
ptvsd.wait_for_attach()
random.seed(args.seed)
np.random.seed(args.seed)
torch.manual_seed(args.seed)
torch.cuda.manual_seed_all(args.seed)
device = torch.device("cuda" if torch.cuda.is_available() else "cpu")
n_gpu = torch.cuda.device_count()
logger.info("device: {}, n_gpu {}".format(device, n_gpu))
if not args.do_train and not args.do_eval:
raise ValueError("At least one of `do_train` or `do_eval` must be True.")
if not os.path.exists(args.output_dir):
os.makedirs(args.output_dir)
# Load tokenizer and model
# This loading functions also add new tokens and embeddings called `special tokens`
# These new embeddings will be fine-tuned on the RocStories dataset
special_tokens = ["_start_", "_delimiter_", "_classify_"]
tokenizer = OpenAIGPTTokenizer.from_pretrained(args.model_name)
tokenizer.add_tokens(special_tokens)
special_tokens_ids = tokenizer.convert_tokens_to_ids(special_tokens)
model = OpenAIGPTDoubleHeadsModel.from_pretrained(args.model_name)
model.resize_token_embeddings(len(tokenizer))
model.to(device)
# Load and encode the datasets
def tokenize_and_encode(obj):
"""Tokenize and encode a nested object"""
if isinstance(obj, str):
return tokenizer.convert_tokens_to_ids(tokenizer.tokenize(obj))
elif isinstance(obj, int):
return obj
return list(tokenize_and_encode(o) for o in obj)
logger.info("Encoding dataset...")
train_dataset = load_rocstories_dataset(args.train_dataset)
eval_dataset = load_rocstories_dataset(args.eval_dataset)
datasets = (train_dataset, eval_dataset)
encoded_datasets = tokenize_and_encode(datasets)
# Compute the max input length for the Transformer
max_length = model.config.n_positions // 2 - 2
input_length = max(
len(story[:max_length]) + max(len(cont1[:max_length]), len(cont2[:max_length])) + 3
for dataset in encoded_datasets
for story, cont1, cont2, _ in dataset
)
input_length = min(input_length, model.config.n_positions) # Max size of input for the pre-trained model
# Prepare inputs tensors and dataloaders
tensor_datasets = pre_process_datasets(encoded_datasets, input_length, max_length, *special_tokens_ids)
train_tensor_dataset, eval_tensor_dataset = tensor_datasets[0], tensor_datasets[1]
train_data = TensorDataset(*train_tensor_dataset)
train_sampler = RandomSampler(train_data)
train_dataloader = DataLoader(train_data, sampler=train_sampler, batch_size=args.train_batch_size)
eval_data = TensorDataset(*eval_tensor_dataset)
eval_sampler = SequentialSampler(eval_data)
eval_dataloader = DataLoader(eval_data, sampler=eval_sampler, batch_size=args.eval_batch_size)
# Prepare optimizer
if args.do_train:
if args.max_steps > 0:
t_total = args.max_steps
args.num_train_epochs = args.max_steps // (len(train_dataloader) // args.gradient_accumulation_steps) + 1
else:
t_total = len(train_dataloader) // args.gradient_accumulation_steps * args.num_train_epochs
param_optimizer = list(model.named_parameters())
no_decay = ["bias", "LayerNorm.bias", "LayerNorm.weight"]
optimizer_grouped_parameters = [
{
"params": [p for n, p in param_optimizer if not any(nd in n for nd in no_decay)],
"weight_decay": args.weight_decay,
},
{"params": [p for n, p in param_optimizer if any(nd in n for nd in no_decay)], "weight_decay": 0.0},
]
optimizer = AdamW(optimizer_grouped_parameters, lr=args.learning_rate, eps=args.adam_epsilon)
scheduler = get_linear_schedule_with_warmup(
optimizer, num_warmup_steps=args.warmup_steps, num_training_steps=t_total
)
if args.do_train:
nb_tr_steps, tr_loss, exp_average_loss = 0, 0, None
model.train()
for _ in trange(int(args.num_train_epochs), desc="Epoch"):
tr_loss = 0
nb_tr_steps = 0
tqdm_bar = tqdm(train_dataloader, desc="Training")
for step, batch in enumerate(tqdm_bar):
batch = tuple(t.to(device) for t in batch)
input_ids, mc_token_ids, lm_labels, mc_labels = batch
losses = model(input_ids, mc_token_ids=mc_token_ids, lm_labels=lm_labels, mc_labels=mc_labels)
loss = args.lm_coef * losses[0] + losses[1]
loss.backward()
optimizer.step()
scheduler.step()
optimizer.zero_grad()
tr_loss += loss.item()
exp_average_loss = (
loss.item() if exp_average_loss is None else 0.7 * exp_average_loss + 0.3 * loss.item()
)
nb_tr_steps += 1
tqdm_bar.desc = "Training loss: {:.2e} lr: {:.2e}".format(exp_average_loss, scheduler.get_lr()[0])
# Save a trained model
if args.do_train:
# Save a trained model, configuration and tokenizer
model_to_save = model.module if hasattr(model, "module") else model # Only save the model itself
# If we save using the predefined names, we can load using `from_pretrained`
output_model_file = os.path.join(args.output_dir, WEIGHTS_NAME)
output_config_file = os.path.join(args.output_dir, CONFIG_NAME)
torch.save(model_to_save.state_dict(), output_model_file)
model_to_save.config.to_json_file(output_config_file)
tokenizer.save_vocabulary(args.output_dir)
# Load a trained model and vocabulary that you have fine-tuned
model = OpenAIGPTDoubleHeadsModel.from_pretrained(args.output_dir)
tokenizer = OpenAIGPTTokenizer.from_pretrained(args.output_dir)
model.to(device)
if args.do_eval:
model.eval()
eval_loss, eval_accuracy = 0, 0
nb_eval_steps, nb_eval_examples = 0, 0
for batch in tqdm(eval_dataloader, desc="Evaluating"):
batch = tuple(t.to(device) for t in batch)
input_ids, mc_token_ids, lm_labels, mc_labels = batch
with torch.no_grad():
_, mc_loss, _, mc_logits = model(
input_ids, mc_token_ids=mc_token_ids, lm_labels=lm_labels, mc_labels=mc_labels
)
mc_logits = mc_logits.detach().cpu().numpy()
mc_labels = mc_labels.to("cpu").numpy()
tmp_eval_accuracy = accuracy(mc_logits, mc_labels)
eval_loss += mc_loss.mean().item()
eval_accuracy += tmp_eval_accuracy
nb_eval_examples += input_ids.size(0)
nb_eval_steps += 1
eval_loss = eval_loss / nb_eval_steps
eval_accuracy = eval_accuracy / nb_eval_examples
train_loss = tr_loss / nb_tr_steps if args.do_train else None
result = {"eval_loss": eval_loss, "eval_accuracy": eval_accuracy, "train_loss": train_loss}
output_eval_file = os.path.join(args.output_dir, "eval_results.txt")
with open(output_eval_file, "w") as writer:
logger.info("***** Eval results *****")
for key in sorted(result.keys()):
logger.info(" %s = %s", key, str(result[key]))
writer.write("%s = %s\n" % (key, str(result[key])))
if __name__ == "__main__":
main()
| 14,269 | 43.454829 | 128 | py |
robust-transformers | robust-transformers-main/examples/legacy/run_camembert.py | #!/usr/bin/env python
import torch
from transformers import CamembertForMaskedLM, CamembertTokenizer
def fill_mask(masked_input, model, tokenizer, topk=5):
# Adapted from https://github.com/pytorch/fairseq/blob/master/fairseq/models/roberta/hub_interface.py
assert masked_input.count("<mask>") == 1
input_ids = torch.tensor(tokenizer.encode(masked_input, add_special_tokens=True)).unsqueeze(0) # Batch size 1
logits = model(input_ids)[0] # The last hidden-state is the first element of the output tuple
masked_index = (input_ids.squeeze() == tokenizer.mask_token_id).nonzero().item()
logits = logits[0, masked_index, :]
prob = logits.softmax(dim=0)
values, indices = prob.topk(k=topk, dim=0)
topk_predicted_token_bpe = " ".join(
[tokenizer.convert_ids_to_tokens(indices[i].item()) for i in range(len(indices))]
)
masked_token = tokenizer.mask_token
topk_filled_outputs = []
for index, predicted_token_bpe in enumerate(topk_predicted_token_bpe.split(" ")):
predicted_token = predicted_token_bpe.replace("\u2581", " ")
if " {0}".format(masked_token) in masked_input:
topk_filled_outputs.append(
(
masked_input.replace(" {0}".format(masked_token), predicted_token),
values[index].item(),
predicted_token,
)
)
else:
topk_filled_outputs.append(
(
masked_input.replace(masked_token, predicted_token),
values[index].item(),
predicted_token,
)
)
return topk_filled_outputs
tokenizer = CamembertTokenizer.from_pretrained("camembert-base")
model = CamembertForMaskedLM.from_pretrained("camembert-base")
model.eval()
masked_input = "Le camembert est <mask> :)"
print(fill_mask(masked_input, model, tokenizer, topk=3))
| 1,935 | 39.333333 | 114 | py |
robust-transformers | robust-transformers-main/examples/legacy/question-answering/run_squad.py | # coding=utf-8
# Copyright 2018 The Google AI Language Team Authors and The HuggingFace Inc. team.
# Copyright (c) 2018, NVIDIA CORPORATION. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
""" Finetuning the library models for question-answering on SQuAD (DistilBERT, Bert, XLM, XLNet)."""
import argparse
import glob
import logging
import os
import random
import timeit
import numpy as np
import torch
from torch.utils.data import DataLoader, RandomSampler, SequentialSampler
from torch.utils.data.distributed import DistributedSampler
from tqdm import tqdm, trange
import transformers
from transformers import (
MODEL_FOR_QUESTION_ANSWERING_MAPPING,
WEIGHTS_NAME,
AdamW,
AutoConfig,
AutoModelForQuestionAnswering,
AutoTokenizer,
get_linear_schedule_with_warmup,
squad_convert_examples_to_features,
)
from transformers.data.metrics.squad_metrics import (
compute_predictions_log_probs,
compute_predictions_logits,
squad_evaluate,
)
from transformers.data.processors.squad import SquadResult, SquadV1Processor, SquadV2Processor
from transformers.trainer_utils import is_main_process
try:
from torch.utils.tensorboard import SummaryWriter
except ImportError:
from tensorboardX import SummaryWriter
logger = logging.getLogger(__name__)
MODEL_CONFIG_CLASSES = list(MODEL_FOR_QUESTION_ANSWERING_MAPPING.keys())
MODEL_TYPES = tuple(conf.model_type for conf in MODEL_CONFIG_CLASSES)
def set_seed(args):
random.seed(args.seed)
np.random.seed(args.seed)
torch.manual_seed(args.seed)
if args.n_gpu > 0:
torch.cuda.manual_seed_all(args.seed)
def to_list(tensor):
return tensor.detach().cpu().tolist()
def train(args, train_dataset, model, tokenizer):
"""Train the model"""
if args.local_rank in [-1, 0]:
tb_writer = SummaryWriter()
args.train_batch_size = args.per_gpu_train_batch_size * max(1, args.n_gpu)
train_sampler = RandomSampler(train_dataset) if args.local_rank == -1 else DistributedSampler(train_dataset)
train_dataloader = DataLoader(train_dataset, sampler=train_sampler, batch_size=args.train_batch_size)
if args.max_steps > 0:
t_total = args.max_steps
args.num_train_epochs = args.max_steps // (len(train_dataloader) // args.gradient_accumulation_steps) + 1
else:
t_total = len(train_dataloader) // args.gradient_accumulation_steps * args.num_train_epochs
# Prepare optimizer and schedule (linear warmup and decay)
no_decay = ["bias", "LayerNorm.weight"]
optimizer_grouped_parameters = [
{
"params": [p for n, p in model.named_parameters() if not any(nd in n for nd in no_decay)],
"weight_decay": args.weight_decay,
},
{"params": [p for n, p in model.named_parameters() if any(nd in n for nd in no_decay)], "weight_decay": 0.0},
]
optimizer = AdamW(optimizer_grouped_parameters, lr=args.learning_rate, eps=args.adam_epsilon)
scheduler = get_linear_schedule_with_warmup(
optimizer, num_warmup_steps=args.warmup_steps, num_training_steps=t_total
)
# Check if saved optimizer or scheduler states exist
if os.path.isfile(os.path.join(args.model_name_or_path, "optimizer.pt")) and os.path.isfile(
os.path.join(args.model_name_or_path, "scheduler.pt")
):
# Load in optimizer and scheduler states
optimizer.load_state_dict(torch.load(os.path.join(args.model_name_or_path, "optimizer.pt")))
scheduler.load_state_dict(torch.load(os.path.join(args.model_name_or_path, "scheduler.pt")))
if args.fp16:
try:
from apex import amp
except ImportError:
raise ImportError("Please install apex from https://www.github.com/nvidia/apex to use fp16 training.")
model, optimizer = amp.initialize(model, optimizer, opt_level=args.fp16_opt_level)
# multi-gpu training (should be after apex fp16 initialization)
if args.n_gpu > 1:
model = torch.nn.DataParallel(model)
# Distributed training (should be after apex fp16 initialization)
if args.local_rank != -1:
model = torch.nn.parallel.DistributedDataParallel(
model, device_ids=[args.local_rank], output_device=args.local_rank, find_unused_parameters=True
)
# Train!
logger.info("***** Running training *****")
logger.info(" Num examples = %d", len(train_dataset))
logger.info(" Num Epochs = %d", args.num_train_epochs)
logger.info(" Instantaneous batch size per GPU = %d", args.per_gpu_train_batch_size)
logger.info(
" Total train batch size (w. parallel, distributed & accumulation) = %d",
args.train_batch_size
* args.gradient_accumulation_steps
* (torch.distributed.get_world_size() if args.local_rank != -1 else 1),
)
logger.info(" Gradient Accumulation steps = %d", args.gradient_accumulation_steps)
logger.info(" Total optimization steps = %d", t_total)
global_step = 1
epochs_trained = 0
steps_trained_in_current_epoch = 0
# Check if continuing training from a checkpoint
if os.path.exists(args.model_name_or_path):
try:
# set global_step to gobal_step of last saved checkpoint from model path
checkpoint_suffix = args.model_name_or_path.split("-")[-1].split("/")[0]
global_step = int(checkpoint_suffix)
epochs_trained = global_step // (len(train_dataloader) // args.gradient_accumulation_steps)
steps_trained_in_current_epoch = global_step % (len(train_dataloader) // args.gradient_accumulation_steps)
logger.info(" Continuing training from checkpoint, will skip to saved global_step")
logger.info(" Continuing training from epoch %d", epochs_trained)
logger.info(" Continuing training from global step %d", global_step)
logger.info(" Will skip the first %d steps in the first epoch", steps_trained_in_current_epoch)
except ValueError:
logger.info(" Starting fine-tuning.")
tr_loss, logging_loss = 0.0, 0.0
model.zero_grad()
train_iterator = trange(
epochs_trained, int(args.num_train_epochs), desc="Epoch", disable=args.local_rank not in [-1, 0]
)
# Added here for reproductibility
set_seed(args)
for _ in train_iterator:
epoch_iterator = tqdm(train_dataloader, desc="Iteration", disable=args.local_rank not in [-1, 0])
for step, batch in enumerate(epoch_iterator):
# Skip past any already trained steps if resuming training
if steps_trained_in_current_epoch > 0:
steps_trained_in_current_epoch -= 1
continue
model.train()
batch = tuple(t.to(args.device) for t in batch)
inputs = {
"input_ids": batch[0],
"attention_mask": batch[1],
"token_type_ids": batch[2],
"start_positions": batch[3],
"end_positions": batch[4],
}
if args.model_type in ["xlm", "roberta", "distilbert", "camembert", "bart", "longformer"]:
del inputs["token_type_ids"]
if args.model_type in ["xlnet", "xlm"]:
inputs.update({"cls_index": batch[5], "p_mask": batch[6]})
if args.version_2_with_negative:
inputs.update({"is_impossible": batch[7]})
if hasattr(model, "config") and hasattr(model.config, "lang2id"):
inputs.update(
{"langs": (torch.ones(batch[0].shape, dtype=torch.int64) * args.lang_id).to(args.device)}
)
outputs = model(**inputs)
# model outputs are always tuple in transformers (see doc)
loss = outputs[0]
if args.n_gpu > 1:
loss = loss.mean() # mean() to average on multi-gpu parallel (not distributed) training
if args.gradient_accumulation_steps > 1:
loss = loss / args.gradient_accumulation_steps
if args.fp16:
with amp.scale_loss(loss, optimizer) as scaled_loss:
scaled_loss.backward()
else:
loss.backward()
tr_loss += loss.item()
if (step + 1) % args.gradient_accumulation_steps == 0:
if args.fp16:
torch.nn.utils.clip_grad_norm_(amp.master_params(optimizer), args.max_grad_norm)
else:
torch.nn.utils.clip_grad_norm_(model.parameters(), args.max_grad_norm)
optimizer.step()
scheduler.step() # Update learning rate schedule
model.zero_grad()
global_step += 1
# Log metrics
if args.local_rank in [-1, 0] and args.logging_steps > 0 and global_step % args.logging_steps == 0:
# Only evaluate when single GPU otherwise metrics may not average well
if args.local_rank == -1 and args.evaluate_during_training:
results = evaluate(args, model, tokenizer)
for key, value in results.items():
tb_writer.add_scalar("eval_{}".format(key), value, global_step)
tb_writer.add_scalar("lr", scheduler.get_lr()[0], global_step)
tb_writer.add_scalar("loss", (tr_loss - logging_loss) / args.logging_steps, global_step)
logging_loss = tr_loss
# Save model checkpoint
if args.local_rank in [-1, 0] and args.save_steps > 0 and global_step % args.save_steps == 0:
output_dir = os.path.join(args.output_dir, "checkpoint-{}".format(global_step))
# Take care of distributed/parallel training
model_to_save = model.module if hasattr(model, "module") else model
model_to_save.save_pretrained(output_dir)
tokenizer.save_pretrained(output_dir)
torch.save(args, os.path.join(output_dir, "training_args.bin"))
logger.info("Saving model checkpoint to %s", output_dir)
torch.save(optimizer.state_dict(), os.path.join(output_dir, "optimizer.pt"))
torch.save(scheduler.state_dict(), os.path.join(output_dir, "scheduler.pt"))
logger.info("Saving optimizer and scheduler states to %s", output_dir)
if args.max_steps > 0 and global_step > args.max_steps:
epoch_iterator.close()
break
if args.max_steps > 0 and global_step > args.max_steps:
train_iterator.close()
break
if args.local_rank in [-1, 0]:
tb_writer.close()
return global_step, tr_loss / global_step
def evaluate(args, model, tokenizer, prefix=""):
dataset, examples, features = load_and_cache_examples(args, tokenizer, evaluate=True, output_examples=True)
if not os.path.exists(args.output_dir) and args.local_rank in [-1, 0]:
os.makedirs(args.output_dir)
args.eval_batch_size = args.per_gpu_eval_batch_size * max(1, args.n_gpu)
# Note that DistributedSampler samples randomly
eval_sampler = SequentialSampler(dataset)
eval_dataloader = DataLoader(dataset, sampler=eval_sampler, batch_size=args.eval_batch_size)
# multi-gpu evaluate
if args.n_gpu > 1 and not isinstance(model, torch.nn.DataParallel):
model = torch.nn.DataParallel(model)
# Eval!
logger.info("***** Running evaluation {} *****".format(prefix))
logger.info(" Num examples = %d", len(dataset))
logger.info(" Batch size = %d", args.eval_batch_size)
all_results = []
start_time = timeit.default_timer()
for batch in tqdm(eval_dataloader, desc="Evaluating"):
model.eval()
batch = tuple(t.to(args.device) for t in batch)
with torch.no_grad():
inputs = {
"input_ids": batch[0],
"attention_mask": batch[1],
"token_type_ids": batch[2],
}
if args.model_type in ["xlm", "roberta", "distilbert", "camembert", "bart", "longformer"]:
del inputs["token_type_ids"]
feature_indices = batch[3]
# XLNet and XLM use more arguments for their predictions
if args.model_type in ["xlnet", "xlm"]:
inputs.update({"cls_index": batch[4], "p_mask": batch[5]})
# for lang_id-sensitive xlm models
if hasattr(model, "config") and hasattr(model.config, "lang2id"):
inputs.update(
{"langs": (torch.ones(batch[0].shape, dtype=torch.int64) * args.lang_id).to(args.device)}
)
outputs = model(**inputs)
for i, feature_index in enumerate(feature_indices):
eval_feature = features[feature_index.item()]
unique_id = int(eval_feature.unique_id)
output = [to_list(output[i]) for output in outputs.to_tuple()]
# Some models (XLNet, XLM) use 5 arguments for their predictions, while the other "simpler"
# models only use two.
if len(output) >= 5:
start_logits = output[0]
start_top_index = output[1]
end_logits = output[2]
end_top_index = output[3]
cls_logits = output[4]
result = SquadResult(
unique_id,
start_logits,
end_logits,
start_top_index=start_top_index,
end_top_index=end_top_index,
cls_logits=cls_logits,
)
else:
start_logits, end_logits = output
result = SquadResult(unique_id, start_logits, end_logits)
all_results.append(result)
evalTime = timeit.default_timer() - start_time
logger.info(" Evaluation done in total %f secs (%f sec per example)", evalTime, evalTime / len(dataset))
# Compute predictions
output_prediction_file = os.path.join(args.output_dir, "predictions_{}.json".format(prefix))
output_nbest_file = os.path.join(args.output_dir, "nbest_predictions_{}.json".format(prefix))
if args.version_2_with_negative:
output_null_log_odds_file = os.path.join(args.output_dir, "null_odds_{}.json".format(prefix))
else:
output_null_log_odds_file = None
# XLNet and XLM use a more complex post-processing procedure
if args.model_type in ["xlnet", "xlm"]:
start_n_top = model.config.start_n_top if hasattr(model, "config") else model.module.config.start_n_top
end_n_top = model.config.end_n_top if hasattr(model, "config") else model.module.config.end_n_top
predictions = compute_predictions_log_probs(
examples,
features,
all_results,
args.n_best_size,
args.max_answer_length,
output_prediction_file,
output_nbest_file,
output_null_log_odds_file,
start_n_top,
end_n_top,
args.version_2_with_negative,
tokenizer,
args.verbose_logging,
)
else:
predictions = compute_predictions_logits(
examples,
features,
all_results,
args.n_best_size,
args.max_answer_length,
args.do_lower_case,
output_prediction_file,
output_nbest_file,
output_null_log_odds_file,
args.verbose_logging,
args.version_2_with_negative,
args.null_score_diff_threshold,
tokenizer,
)
# Compute the F1 and exact scores.
results = squad_evaluate(examples, predictions)
return results
def load_and_cache_examples(args, tokenizer, evaluate=False, output_examples=False):
if args.local_rank not in [-1, 0] and not evaluate:
# Make sure only the first process in distributed training process the dataset, and the others will use the cache
torch.distributed.barrier()
# Load data features from cache or dataset file
input_dir = args.data_dir if args.data_dir else "."
cached_features_file = os.path.join(
input_dir,
"cached_{}_{}_{}".format(
"dev" if evaluate else "train",
list(filter(None, args.model_name_or_path.split("/"))).pop(),
str(args.max_seq_length),
),
)
# Init features and dataset from cache if it exists
if os.path.exists(cached_features_file) and not args.overwrite_cache:
logger.info("Loading features from cached file %s", cached_features_file)
features_and_dataset = torch.load(cached_features_file)
features, dataset, examples = (
features_and_dataset["features"],
features_and_dataset["dataset"],
features_and_dataset["examples"],
)
else:
logger.info("Creating features from dataset file at %s", input_dir)
if not args.data_dir and ((evaluate and not args.predict_file) or (not evaluate and not args.train_file)):
try:
import tensorflow_datasets as tfds
except ImportError:
raise ImportError("If not data_dir is specified, tensorflow_datasets needs to be installed.")
if args.version_2_with_negative:
logger.warning("tensorflow_datasets does not handle version 2 of SQuAD.")
tfds_examples = tfds.load("squad")
examples = SquadV1Processor().get_examples_from_dataset(tfds_examples, evaluate=evaluate)
else:
processor = SquadV2Processor() if args.version_2_with_negative else SquadV1Processor()
if evaluate:
examples = processor.get_dev_examples(args.data_dir, filename=args.predict_file)
else:
examples = processor.get_train_examples(args.data_dir, filename=args.train_file)
features, dataset = squad_convert_examples_to_features(
examples=examples,
tokenizer=tokenizer,
max_seq_length=args.max_seq_length,
doc_stride=args.doc_stride,
max_query_length=args.max_query_length,
is_training=not evaluate,
return_dataset="pt",
threads=args.threads,
)
if args.local_rank in [-1, 0]:
logger.info("Saving features into cached file %s", cached_features_file)
torch.save({"features": features, "dataset": dataset, "examples": examples}, cached_features_file)
if args.local_rank == 0 and not evaluate:
# Make sure only the first process in distributed training process the dataset, and the others will use the cache
torch.distributed.barrier()
if output_examples:
return dataset, examples, features
return dataset
def main():
parser = argparse.ArgumentParser()
# Required parameters
parser.add_argument(
"--model_type",
default=None,
type=str,
required=True,
help="Model type selected in the list: " + ", ".join(MODEL_TYPES),
)
parser.add_argument(
"--model_name_or_path",
default=None,
type=str,
required=True,
help="Path to pretrained model or model identifier from huggingface.co/models",
)
parser.add_argument(
"--output_dir",
default=None,
type=str,
required=True,
help="The output directory where the model checkpoints and predictions will be written.",
)
# Other parameters
parser.add_argument(
"--data_dir",
default=None,
type=str,
help="The input data dir. Should contain the .json files for the task."
+ "If no data dir or train/predict files are specified, will run with tensorflow_datasets.",
)
parser.add_argument(
"--train_file",
default=None,
type=str,
help="The input training file. If a data dir is specified, will look for the file there"
+ "If no data dir or train/predict files are specified, will run with tensorflow_datasets.",
)
parser.add_argument(
"--predict_file",
default=None,
type=str,
help="The input evaluation file. If a data dir is specified, will look for the file there"
+ "If no data dir or train/predict files are specified, will run with tensorflow_datasets.",
)
parser.add_argument(
"--config_name", default="", type=str, help="Pretrained config name or path if not the same as model_name"
)
parser.add_argument(
"--tokenizer_name",
default="",
type=str,
help="Pretrained tokenizer name or path if not the same as model_name",
)
parser.add_argument(
"--cache_dir",
default="",
type=str,
help="Where do you want to store the pre-trained models downloaded from huggingface.co",
)
parser.add_argument(
"--version_2_with_negative",
action="store_true",
help="If true, the SQuAD examples contain some that do not have an answer.",
)
parser.add_argument(
"--null_score_diff_threshold",
type=float,
default=0.0,
help="If null_score - best_non_null is greater than the threshold predict null.",
)
parser.add_argument(
"--max_seq_length",
default=384,
type=int,
help="The maximum total input sequence length after WordPiece tokenization. Sequences "
"longer than this will be truncated, and sequences shorter than this will be padded.",
)
parser.add_argument(
"--doc_stride",
default=128,
type=int,
help="When splitting up a long document into chunks, how much stride to take between chunks.",
)
parser.add_argument(
"--max_query_length",
default=64,
type=int,
help="The maximum number of tokens for the question. Questions longer than this will "
"be truncated to this length.",
)
parser.add_argument("--do_train", action="store_true", help="Whether to run training.")
parser.add_argument("--do_eval", action="store_true", help="Whether to run eval on the dev set.")
parser.add_argument(
"--evaluate_during_training", action="store_true", help="Run evaluation during training at each logging step."
)
parser.add_argument(
"--do_lower_case", action="store_true", help="Set this flag if you are using an uncased model."
)
parser.add_argument("--per_gpu_train_batch_size", default=8, type=int, help="Batch size per GPU/CPU for training.")
parser.add_argument(
"--per_gpu_eval_batch_size", default=8, type=int, help="Batch size per GPU/CPU for evaluation."
)
parser.add_argument("--learning_rate", default=5e-5, type=float, help="The initial learning rate for Adam.")
parser.add_argument(
"--gradient_accumulation_steps",
type=int,
default=1,
help="Number of updates steps to accumulate before performing a backward/update pass.",
)
parser.add_argument("--weight_decay", default=0.0, type=float, help="Weight decay if we apply some.")
parser.add_argument("--adam_epsilon", default=1e-8, type=float, help="Epsilon for Adam optimizer.")
parser.add_argument("--max_grad_norm", default=1.0, type=float, help="Max gradient norm.")
parser.add_argument(
"--num_train_epochs", default=3.0, type=float, help="Total number of training epochs to perform."
)
parser.add_argument(
"--max_steps",
default=-1,
type=int,
help="If > 0: set total number of training steps to perform. Override num_train_epochs.",
)
parser.add_argument("--warmup_steps", default=0, type=int, help="Linear warmup over warmup_steps.")
parser.add_argument(
"--n_best_size",
default=20,
type=int,
help="The total number of n-best predictions to generate in the nbest_predictions.json output file.",
)
parser.add_argument(
"--max_answer_length",
default=30,
type=int,
help="The maximum length of an answer that can be generated. This is needed because the start "
"and end predictions are not conditioned on one another.",
)
parser.add_argument(
"--verbose_logging",
action="store_true",
help="If true, all of the warnings related to data processing will be printed. "
"A number of warnings are expected for a normal SQuAD evaluation.",
)
parser.add_argument(
"--lang_id",
default=0,
type=int,
help="language id of input for language-specific xlm models (see tokenization_xlm.PRETRAINED_INIT_CONFIGURATION)",
)
parser.add_argument("--logging_steps", type=int, default=500, help="Log every X updates steps.")
parser.add_argument("--save_steps", type=int, default=500, help="Save checkpoint every X updates steps.")
parser.add_argument(
"--eval_all_checkpoints",
action="store_true",
help="Evaluate all checkpoints starting with the same prefix as model_name ending and ending with step number",
)
parser.add_argument("--no_cuda", action="store_true", help="Whether not to use CUDA when available")
parser.add_argument(
"--overwrite_output_dir", action="store_true", help="Overwrite the content of the output directory"
)
parser.add_argument(
"--overwrite_cache", action="store_true", help="Overwrite the cached training and evaluation sets"
)
parser.add_argument("--seed", type=int, default=42, help="random seed for initialization")
parser.add_argument("--local_rank", type=int, default=-1, help="local_rank for distributed training on gpus")
parser.add_argument(
"--fp16",
action="store_true",
help="Whether to use 16-bit (mixed) precision (through NVIDIA apex) instead of 32-bit",
)
parser.add_argument(
"--fp16_opt_level",
type=str,
default="O1",
help="For fp16: Apex AMP optimization level selected in ['O0', 'O1', 'O2', and 'O3']."
"See details at https://nvidia.github.io/apex/amp.html",
)
parser.add_argument("--server_ip", type=str, default="", help="Can be used for distant debugging.")
parser.add_argument("--server_port", type=str, default="", help="Can be used for distant debugging.")
parser.add_argument("--threads", type=int, default=1, help="multiple threads for converting example to features")
args = parser.parse_args()
if args.doc_stride >= args.max_seq_length - args.max_query_length:
logger.warning(
"WARNING - You've set a doc stride which may be superior to the document length in some "
"examples. This could result in errors when building features from the examples. Please reduce the doc "
"stride or increase the maximum length to ensure the features are correctly built."
)
if (
os.path.exists(args.output_dir)
and os.listdir(args.output_dir)
and args.do_train
and not args.overwrite_output_dir
):
raise ValueError(
"Output directory ({}) already exists and is not empty. Use --overwrite_output_dir to overcome.".format(
args.output_dir
)
)
# Setup distant debugging if needed
if args.server_ip and args.server_port:
# Distant debugging - see https://code.visualstudio.com/docs/python/debugging#_attach-to-a-local-script
import ptvsd
print("Waiting for debugger attach")
ptvsd.enable_attach(address=(args.server_ip, args.server_port), redirect_output=True)
ptvsd.wait_for_attach()
# Setup CUDA, GPU & distributed training
if args.local_rank == -1 or args.no_cuda:
device = torch.device("cuda" if torch.cuda.is_available() and not args.no_cuda else "cpu")
args.n_gpu = 0 if args.no_cuda else torch.cuda.device_count()
else: # Initializes the distributed backend which will take care of sychronizing nodes/GPUs
torch.cuda.set_device(args.local_rank)
device = torch.device("cuda", args.local_rank)
torch.distributed.init_process_group(backend="nccl")
args.n_gpu = 1
args.device = device
# Setup logging
logging.basicConfig(
format="%(asctime)s - %(levelname)s - %(name)s - %(message)s",
datefmt="%m/%d/%Y %H:%M:%S",
level=logging.INFO if args.local_rank in [-1, 0] else logging.WARN,
)
logger.warning(
"Process rank: %s, device: %s, n_gpu: %s, distributed training: %s, 16-bits training: %s",
args.local_rank,
device,
args.n_gpu,
bool(args.local_rank != -1),
args.fp16,
)
# Set the verbosity to info of the Transformers logger (on main process only):
if is_main_process(args.local_rank):
transformers.utils.logging.set_verbosity_info()
transformers.utils.logging.enable_default_handler()
transformers.utils.logging.enable_explicit_format()
# Set seed
set_seed(args)
# Load pretrained model and tokenizer
if args.local_rank not in [-1, 0]:
# Make sure only the first process in distributed training will download model & vocab
torch.distributed.barrier()
args.model_type = args.model_type.lower()
config = AutoConfig.from_pretrained(
args.config_name if args.config_name else args.model_name_or_path,
cache_dir=args.cache_dir if args.cache_dir else None,
)
tokenizer = AutoTokenizer.from_pretrained(
args.tokenizer_name if args.tokenizer_name else args.model_name_or_path,
do_lower_case=args.do_lower_case,
cache_dir=args.cache_dir if args.cache_dir else None,
use_fast=False, # SquadDataset is not compatible with Fast tokenizers which have a smarter overflow handeling
)
model = AutoModelForQuestionAnswering.from_pretrained(
args.model_name_or_path,
from_tf=bool(".ckpt" in args.model_name_or_path),
config=config,
cache_dir=args.cache_dir if args.cache_dir else None,
)
if args.local_rank == 0:
# Make sure only the first process in distributed training will download model & vocab
torch.distributed.barrier()
model.to(args.device)
logger.info("Training/evaluation parameters %s", args)
# Before we do anything with models, we want to ensure that we get fp16 execution of torch.einsum if args.fp16 is set.
# Otherwise it'll default to "promote" mode, and we'll get fp32 operations. Note that running `--fp16_opt_level="O2"` will
# remove the need for this code, but it is still valid.
if args.fp16:
try:
import apex
apex.amp.register_half_function(torch, "einsum")
except ImportError:
raise ImportError("Please install apex from https://www.github.com/nvidia/apex to use fp16 training.")
# Training
if args.do_train:
train_dataset = load_and_cache_examples(args, tokenizer, evaluate=False, output_examples=False)
global_step, tr_loss = train(args, train_dataset, model, tokenizer)
logger.info(" global_step = %s, average loss = %s", global_step, tr_loss)
# Save the trained model and the tokenizer
if args.do_train and (args.local_rank == -1 or torch.distributed.get_rank() == 0):
logger.info("Saving model checkpoint to %s", args.output_dir)
# Save a trained model, configuration and tokenizer using `save_pretrained()`.
# They can then be reloaded using `from_pretrained()`
# Take care of distributed/parallel training
model_to_save = model.module if hasattr(model, "module") else model
model_to_save.save_pretrained(args.output_dir)
tokenizer.save_pretrained(args.output_dir)
# Good practice: save your training arguments together with the trained model
torch.save(args, os.path.join(args.output_dir, "training_args.bin"))
# Load a trained model and vocabulary that you have fine-tuned
model = AutoModelForQuestionAnswering.from_pretrained(args.output_dir) # , force_download=True)
# SquadDataset is not compatible with Fast tokenizers which have a smarter overflow handeling
# So we use use_fast=False here for now until Fast-tokenizer-compatible-examples are out
tokenizer = AutoTokenizer.from_pretrained(args.output_dir, do_lower_case=args.do_lower_case, use_fast=False)
model.to(args.device)
# Evaluation - we can ask to evaluate all the checkpoints (sub-directories) in a directory
results = {}
if args.do_eval and args.local_rank in [-1, 0]:
if args.do_train:
logger.info("Loading checkpoints saved during training for evaluation")
checkpoints = [args.output_dir]
if args.eval_all_checkpoints:
checkpoints = list(
os.path.dirname(c)
for c in sorted(glob.glob(args.output_dir + "/**/" + WEIGHTS_NAME, recursive=True))
)
else:
logger.info("Loading checkpoint %s for evaluation", args.model_name_or_path)
checkpoints = [args.model_name_or_path]
logger.info("Evaluate the following checkpoints: %s", checkpoints)
for checkpoint in checkpoints:
# Reload the model
global_step = checkpoint.split("-")[-1] if len(checkpoints) > 1 else ""
model = AutoModelForQuestionAnswering.from_pretrained(checkpoint) # , force_download=True)
model.to(args.device)
# Evaluate
result = evaluate(args, model, tokenizer, prefix=global_step)
result = dict((k + ("_{}".format(global_step) if global_step else ""), v) for k, v in result.items())
results.update(result)
logger.info("Results: {}".format(results))
return results
if __name__ == "__main__":
main()
| 34,739 | 40.805054 | 126 | py |
robust-transformers | robust-transformers-main/examples/legacy/pytorch-lightning/run_glue.py | import argparse
import glob
import logging
import os
import time
from argparse import Namespace
import numpy as np
import torch
from torch.utils.data import DataLoader, TensorDataset
from lightning_base import BaseTransformer, add_generic_args, generic_train
from transformers import glue_compute_metrics as compute_metrics
from transformers import glue_convert_examples_to_features as convert_examples_to_features
from transformers import glue_output_modes
from transformers import glue_processors as processors
from transformers import glue_tasks_num_labels
logger = logging.getLogger(__name__)
class GLUETransformer(BaseTransformer):
mode = "sequence-classification"
def __init__(self, hparams):
if type(hparams) == dict:
hparams = Namespace(**hparams)
hparams.glue_output_mode = glue_output_modes[hparams.task]
num_labels = glue_tasks_num_labels[hparams.task]
super().__init__(hparams, num_labels, self.mode)
def forward(self, **inputs):
return self.model(**inputs)
def training_step(self, batch, batch_idx):
inputs = {"input_ids": batch[0], "attention_mask": batch[1], "labels": batch[3]}
if self.config.model_type not in ["distilbert", "bart"]:
inputs["token_type_ids"] = batch[2] if self.config.model_type in ["bert", "xlnet", "albert"] else None
outputs = self(**inputs)
loss = outputs[0]
lr_scheduler = self.trainer.lr_schedulers[0]["scheduler"]
tensorboard_logs = {"loss": loss, "rate": lr_scheduler.get_last_lr()[-1]}
return {"loss": loss, "log": tensorboard_logs}
def prepare_data(self):
"Called to initialize data. Use the call to construct features"
args = self.hparams
processor = processors[args.task]()
self.labels = processor.get_labels()
for mode in ["train", "dev"]:
cached_features_file = self._feature_file(mode)
if os.path.exists(cached_features_file) and not args.overwrite_cache:
logger.info("Loading features from cached file %s", cached_features_file)
else:
logger.info("Creating features from dataset file at %s", args.data_dir)
examples = (
processor.get_dev_examples(args.data_dir)
if mode == "dev"
else processor.get_train_examples(args.data_dir)
)
features = convert_examples_to_features(
examples,
self.tokenizer,
max_length=args.max_seq_length,
label_list=self.labels,
output_mode=args.glue_output_mode,
)
logger.info("Saving features into cached file %s", cached_features_file)
torch.save(features, cached_features_file)
def get_dataloader(self, mode: str, batch_size: int, shuffle: bool = False) -> DataLoader:
"Load datasets. Called after prepare data."
# We test on dev set to compare to benchmarks without having to submit to GLUE server
mode = "dev" if mode == "test" else mode
cached_features_file = self._feature_file(mode)
logger.info("Loading features from cached file %s", cached_features_file)
features = torch.load(cached_features_file)
all_input_ids = torch.tensor([f.input_ids for f in features], dtype=torch.long)
all_attention_mask = torch.tensor([f.attention_mask for f in features], dtype=torch.long)
all_token_type_ids = torch.tensor([f.token_type_ids for f in features], dtype=torch.long)
if self.hparams.glue_output_mode == "classification":
all_labels = torch.tensor([f.label for f in features], dtype=torch.long)
elif self.hparams.glue_output_mode == "regression":
all_labels = torch.tensor([f.label for f in features], dtype=torch.float)
return DataLoader(
TensorDataset(all_input_ids, all_attention_mask, all_token_type_ids, all_labels),
batch_size=batch_size,
shuffle=shuffle,
)
def validation_step(self, batch, batch_idx):
inputs = {"input_ids": batch[0], "attention_mask": batch[1], "labels": batch[3]}
if self.config.model_type not in ["distilbert", "bart"]:
inputs["token_type_ids"] = batch[2] if self.config.model_type in ["bert", "xlnet", "albert"] else None
outputs = self(**inputs)
tmp_eval_loss, logits = outputs[:2]
preds = logits.detach().cpu().numpy()
out_label_ids = inputs["labels"].detach().cpu().numpy()
return {"val_loss": tmp_eval_loss.detach().cpu(), "pred": preds, "target": out_label_ids}
def _eval_end(self, outputs) -> tuple:
val_loss_mean = torch.stack([x["val_loss"] for x in outputs]).mean().detach().cpu().item()
preds = np.concatenate([x["pred"] for x in outputs], axis=0)
if self.hparams.glue_output_mode == "classification":
preds = np.argmax(preds, axis=1)
elif self.hparams.glue_output_mode == "regression":
preds = np.squeeze(preds)
out_label_ids = np.concatenate([x["target"] for x in outputs], axis=0)
out_label_list = [[] for _ in range(out_label_ids.shape[0])]
preds_list = [[] for _ in range(out_label_ids.shape[0])]
results = {**{"val_loss": val_loss_mean}, **compute_metrics(self.hparams.task, preds, out_label_ids)}
ret = {k: v for k, v in results.items()}
ret["log"] = results
return ret, preds_list, out_label_list
def validation_epoch_end(self, outputs: list) -> dict:
ret, preds, targets = self._eval_end(outputs)
logs = ret["log"]
return {"val_loss": logs["val_loss"], "log": logs, "progress_bar": logs}
def test_epoch_end(self, outputs) -> dict:
ret, predictions, targets = self._eval_end(outputs)
logs = ret["log"]
# `val_loss` is the key returned by `self._eval_end()` but actually refers to `test_loss`
return {"avg_test_loss": logs["val_loss"], "log": logs, "progress_bar": logs}
@staticmethod
def add_model_specific_args(parser, root_dir):
BaseTransformer.add_model_specific_args(parser, root_dir)
parser.add_argument(
"--max_seq_length",
default=128,
type=int,
help="The maximum total input sequence length after tokenization. Sequences longer "
"than this will be truncated, sequences shorter will be padded.",
)
parser.add_argument(
"--task",
default="",
type=str,
required=True,
help="The GLUE task to run",
)
parser.add_argument(
"--gpus",
default=0,
type=int,
help="The number of GPUs allocated for this, it is by default 0 meaning none",
)
parser.add_argument(
"--overwrite_cache", action="store_true", help="Overwrite the cached training and evaluation sets"
)
return parser
def main():
parser = argparse.ArgumentParser()
add_generic_args(parser, os.getcwd())
parser = GLUETransformer.add_model_specific_args(parser, os.getcwd())
args = parser.parse_args()
# If output_dir not provided, a folder will be generated in pwd
if args.output_dir is None:
args.output_dir = os.path.join(
"./results",
f"{args.task}_{time.strftime('%Y%m%d_%H%M%S')}",
)
os.makedirs(args.output_dir)
model = GLUETransformer(args)
trainer = generic_train(model, args)
# Optionally, predict on dev set and write to output_dir
if args.do_predict:
checkpoints = list(sorted(glob.glob(os.path.join(args.output_dir, "checkpoint-epoch=*.ckpt"), recursive=True)))
model = model.load_from_checkpoint(checkpoints[-1])
return trainer.test(model)
if __name__ == "__main__":
main()
| 8,014 | 38.678218 | 119 | py |
robust-transformers | robust-transformers-main/examples/legacy/pytorch-lightning/lightning_base.py | import argparse
import logging
import os
from pathlib import Path
from typing import Any, Dict
import pytorch_lightning as pl
from pytorch_lightning.utilities import rank_zero_info
from transformers import (
AdamW,
AutoConfig,
AutoModel,
AutoModelForPreTraining,
AutoModelForQuestionAnswering,
AutoModelForSeq2SeqLM,
AutoModelForSequenceClassification,
AutoModelForTokenClassification,
AutoModelWithLMHead,
AutoTokenizer,
PretrainedConfig,
PreTrainedTokenizer,
)
from transformers.optimization import (
Adafactor,
get_cosine_schedule_with_warmup,
get_cosine_with_hard_restarts_schedule_with_warmup,
get_linear_schedule_with_warmup,
get_polynomial_decay_schedule_with_warmup,
)
from transformers.utils.versions import require_version
logger = logging.getLogger(__name__)
require_version("pytorch_lightning>=1.0.4")
MODEL_MODES = {
"base": AutoModel,
"sequence-classification": AutoModelForSequenceClassification,
"question-answering": AutoModelForQuestionAnswering,
"pretraining": AutoModelForPreTraining,
"token-classification": AutoModelForTokenClassification,
"language-modeling": AutoModelWithLMHead,
"summarization": AutoModelForSeq2SeqLM,
"translation": AutoModelForSeq2SeqLM,
}
# update this and the import above to support new schedulers from transformers.optimization
arg_to_scheduler = {
"linear": get_linear_schedule_with_warmup,
"cosine": get_cosine_schedule_with_warmup,
"cosine_w_restarts": get_cosine_with_hard_restarts_schedule_with_warmup,
"polynomial": get_polynomial_decay_schedule_with_warmup,
# '': get_constant_schedule, # not supported for now
# '': get_constant_schedule_with_warmup, # not supported for now
}
arg_to_scheduler_choices = sorted(arg_to_scheduler.keys())
arg_to_scheduler_metavar = "{" + ", ".join(arg_to_scheduler_choices) + "}"
class BaseTransformer(pl.LightningModule):
def __init__(
self,
hparams: argparse.Namespace,
num_labels=None,
mode="base",
config=None,
tokenizer=None,
model=None,
**config_kwargs
):
"""Initialize a model, tokenizer and config."""
super().__init__()
# TODO: move to self.save_hyperparameters()
# self.save_hyperparameters()
# can also expand arguments into trainer signature for easier reading
self.save_hyperparameters(hparams)
self.step_count = 0
self.output_dir = Path(self.hparams.output_dir)
cache_dir = self.hparams.cache_dir if self.hparams.cache_dir else None
if config is None:
self.config = AutoConfig.from_pretrained(
self.hparams.config_name if self.hparams.config_name else self.hparams.model_name_or_path,
**({"num_labels": num_labels} if num_labels is not None else {}),
cache_dir=cache_dir,
**config_kwargs,
)
else:
self.config: PretrainedConfig = config
extra_model_params = ("encoder_layerdrop", "decoder_layerdrop", "dropout", "attention_dropout")
for p in extra_model_params:
if getattr(self.hparams, p, None):
assert hasattr(self.config, p), f"model config doesn't have a `{p}` attribute"
setattr(self.config, p, getattr(self.hparams, p))
if tokenizer is None:
self.tokenizer = AutoTokenizer.from_pretrained(
self.hparams.tokenizer_name if self.hparams.tokenizer_name else self.hparams.model_name_or_path,
cache_dir=cache_dir,
)
else:
self.tokenizer: PreTrainedTokenizer = tokenizer
self.model_type = MODEL_MODES[mode]
if model is None:
self.model = self.model_type.from_pretrained(
self.hparams.model_name_or_path,
from_tf=bool(".ckpt" in self.hparams.model_name_or_path),
config=self.config,
cache_dir=cache_dir,
)
else:
self.model = model
def load_hf_checkpoint(self, *args, **kwargs):
self.model = self.model_type.from_pretrained(*args, **kwargs)
def get_lr_scheduler(self):
get_schedule_func = arg_to_scheduler[self.hparams.lr_scheduler]
scheduler = get_schedule_func(
self.opt, num_warmup_steps=self.hparams.warmup_steps, num_training_steps=self.total_steps()
)
scheduler = {"scheduler": scheduler, "interval": "step", "frequency": 1}
return scheduler
def configure_optimizers(self):
"""Prepare optimizer and schedule (linear warmup and decay)"""
model = self.model
no_decay = ["bias", "LayerNorm.weight"]
optimizer_grouped_parameters = [
{
"params": [p for n, p in model.named_parameters() if not any(nd in n for nd in no_decay)],
"weight_decay": self.hparams.weight_decay,
},
{
"params": [p for n, p in model.named_parameters() if any(nd in n for nd in no_decay)],
"weight_decay": 0.0,
},
]
if self.hparams.adafactor:
optimizer = Adafactor(
optimizer_grouped_parameters, lr=self.hparams.learning_rate, scale_parameter=False, relative_step=False
)
else:
optimizer = AdamW(
optimizer_grouped_parameters, lr=self.hparams.learning_rate, eps=self.hparams.adam_epsilon
)
self.opt = optimizer
scheduler = self.get_lr_scheduler()
return [optimizer], [scheduler]
def test_step(self, batch, batch_nb):
return self.validation_step(batch, batch_nb)
def test_epoch_end(self, outputs):
return self.validation_end(outputs)
def total_steps(self) -> int:
"""The number of total training steps that will be run. Used for lr scheduler purposes."""
num_devices = max(1, self.hparams.gpus) # TODO: consider num_tpu_cores
effective_batch_size = self.hparams.train_batch_size * self.hparams.accumulate_grad_batches * num_devices
return (self.dataset_size / effective_batch_size) * self.hparams.max_epochs
def setup(self, mode):
if mode == "test":
self.dataset_size = len(self.test_dataloader().dataset)
else:
self.train_loader = self.get_dataloader("train", self.hparams.train_batch_size, shuffle=True)
self.dataset_size = len(self.train_dataloader().dataset)
def get_dataloader(self, type_path: str, batch_size: int, shuffle: bool = False):
raise NotImplementedError("You must implement this for your task")
def train_dataloader(self):
return self.train_loader
def val_dataloader(self):
return self.get_dataloader("dev", self.hparams.eval_batch_size, shuffle=False)
def test_dataloader(self):
return self.get_dataloader("test", self.hparams.eval_batch_size, shuffle=False)
def _feature_file(self, mode):
return os.path.join(
self.hparams.data_dir,
"cached_{}_{}_{}".format(
mode,
list(filter(None, self.hparams.model_name_or_path.split("/"))).pop(),
str(self.hparams.max_seq_length),
),
)
@pl.utilities.rank_zero_only
def on_save_checkpoint(self, checkpoint: Dict[str, Any]) -> None:
save_path = self.output_dir.joinpath("best_tfmr")
self.model.config.save_step = self.step_count
self.model.save_pretrained(save_path)
self.tokenizer.save_pretrained(save_path)
@staticmethod
def add_model_specific_args(parser, root_dir):
parser.add_argument(
"--model_name_or_path",
default=None,
type=str,
required=True,
help="Path to pretrained model or model identifier from huggingface.co/models",
)
parser.add_argument(
"--config_name", default="", type=str, help="Pretrained config name or path if not the same as model_name"
)
parser.add_argument(
"--tokenizer_name",
default=None,
type=str,
help="Pretrained tokenizer name or path if not the same as model_name",
)
parser.add_argument(
"--cache_dir",
default="",
type=str,
help="Where do you want to store the pre-trained models downloaded from huggingface.co",
)
parser.add_argument(
"--encoder_layerdrop",
type=float,
help="Encoder layer dropout probability (Optional). Goes into model.config",
)
parser.add_argument(
"--decoder_layerdrop",
type=float,
help="Decoder layer dropout probability (Optional). Goes into model.config",
)
parser.add_argument(
"--dropout",
type=float,
help="Dropout probability (Optional). Goes into model.config",
)
parser.add_argument(
"--attention_dropout",
type=float,
help="Attention dropout probability (Optional). Goes into model.config",
)
parser.add_argument("--learning_rate", default=5e-5, type=float, help="The initial learning rate for Adam.")
parser.add_argument(
"--lr_scheduler",
default="linear",
choices=arg_to_scheduler_choices,
metavar=arg_to_scheduler_metavar,
type=str,
help="Learning rate scheduler",
)
parser.add_argument("--weight_decay", default=0.0, type=float, help="Weight decay if we apply some.")
parser.add_argument("--adam_epsilon", default=1e-8, type=float, help="Epsilon for Adam optimizer.")
parser.add_argument("--warmup_steps", default=0, type=int, help="Linear warmup over warmup_steps.")
parser.add_argument("--num_workers", default=4, type=int, help="kwarg passed to DataLoader")
parser.add_argument("--num_train_epochs", dest="max_epochs", default=3, type=int)
parser.add_argument("--train_batch_size", default=32, type=int)
parser.add_argument("--eval_batch_size", default=32, type=int)
parser.add_argument("--adafactor", action="store_true")
class LoggingCallback(pl.Callback):
def on_batch_end(self, trainer, pl_module):
lr_scheduler = trainer.lr_schedulers[0]["scheduler"]
lrs = {f"lr_group_{i}": lr for i, lr in enumerate(lr_scheduler.get_lr())}
pl_module.logger.log_metrics(lrs)
def on_validation_end(self, trainer: pl.Trainer, pl_module: pl.LightningModule):
rank_zero_info("***** Validation results *****")
metrics = trainer.callback_metrics
# Log results
for key in sorted(metrics):
if key not in ["log", "progress_bar"]:
rank_zero_info("{} = {}\n".format(key, str(metrics[key])))
def on_test_end(self, trainer: pl.Trainer, pl_module: pl.LightningModule):
rank_zero_info("***** Test results *****")
metrics = trainer.callback_metrics
# Log and save results to file
output_test_results_file = os.path.join(pl_module.hparams.output_dir, "test_results.txt")
with open(output_test_results_file, "w") as writer:
for key in sorted(metrics):
if key not in ["log", "progress_bar"]:
rank_zero_info("{} = {}\n".format(key, str(metrics[key])))
writer.write("{} = {}\n".format(key, str(metrics[key])))
def add_generic_args(parser, root_dir) -> None:
# To allow all pl args uncomment the following line
# parser = pl.Trainer.add_argparse_args(parser)
parser.add_argument(
"--output_dir",
default=None,
type=str,
required=True,
help="The output directory where the model predictions and checkpoints will be written.",
)
parser.add_argument(
"--fp16",
action="store_true",
help="Whether to use 16-bit (mixed) precision (through NVIDIA apex) instead of 32-bit",
)
parser.add_argument(
"--fp16_opt_level",
type=str,
default="O2",
help="For fp16: Apex AMP optimization level selected in ['O0', 'O1', 'O2', and 'O3']."
"See details at https://nvidia.github.io/apex/amp.html",
)
parser.add_argument("--n_tpu_cores", dest="tpu_cores", type=int)
parser.add_argument("--max_grad_norm", dest="gradient_clip_val", default=1.0, type=float, help="Max gradient norm")
parser.add_argument("--do_train", action="store_true", help="Whether to run training.")
parser.add_argument("--do_predict", action="store_true", help="Whether to run predictions on the test set.")
parser.add_argument(
"--gradient_accumulation_steps",
dest="accumulate_grad_batches",
type=int,
default=1,
help="Number of updates steps to accumulate before performing a backward/update pass.",
)
parser.add_argument("--seed", type=int, default=42, help="random seed for initialization")
parser.add_argument(
"--data_dir",
default=None,
type=str,
required=True,
help="The input data dir. Should contain the training files for the CoNLL-2003 NER task.",
)
def generic_train(
model: BaseTransformer,
args: argparse.Namespace,
early_stopping_callback=None,
logger=True, # can pass WandbLogger() here
extra_callbacks=[],
checkpoint_callback=None,
logging_callback=None,
**extra_train_kwargs
):
pl.seed_everything(args.seed)
# init model
odir = Path(model.hparams.output_dir)
odir.mkdir(exist_ok=True)
# add custom checkpoints
if checkpoint_callback is None:
checkpoint_callback = pl.callbacks.ModelCheckpoint(
filepath=args.output_dir, prefix="checkpoint", monitor="val_loss", mode="min", save_top_k=1
)
if early_stopping_callback:
extra_callbacks.append(early_stopping_callback)
if logging_callback is None:
logging_callback = LoggingCallback()
train_params = {}
# TODO: remove with PyTorch 1.6 since pl uses native amp
if args.fp16:
train_params["precision"] = 16
train_params["amp_level"] = args.fp16_opt_level
if args.gpus > 1:
train_params["distributed_backend"] = "ddp"
train_params["accumulate_grad_batches"] = args.accumulate_grad_batches
train_params["accelerator"] = extra_train_kwargs.get("accelerator", None)
train_params["profiler"] = extra_train_kwargs.get("profiler", None)
trainer = pl.Trainer.from_argparse_args(
args,
weights_summary=None,
callbacks=[logging_callback] + extra_callbacks,
logger=logger,
checkpoint_callback=checkpoint_callback,
**train_params,
)
if args.do_train:
trainer.fit(model)
return trainer
| 15,022 | 37.32398 | 119 | py |
robust-transformers | robust-transformers-main/examples/legacy/pytorch-lightning/run_ner.py | import argparse
import glob
import logging
import os
from argparse import Namespace
from importlib import import_module
import numpy as np
import torch
from seqeval.metrics import accuracy_score, f1_score, precision_score, recall_score
from torch.nn import CrossEntropyLoss
from torch.utils.data import DataLoader, TensorDataset
from lightning_base import BaseTransformer, add_generic_args, generic_train
from utils_ner import TokenClassificationTask
logger = logging.getLogger(__name__)
class NERTransformer(BaseTransformer):
"""
A training module for NER. See BaseTransformer for the core options.
"""
mode = "token-classification"
def __init__(self, hparams):
if type(hparams) == dict:
hparams = Namespace(**hparams)
module = import_module("tasks")
try:
token_classification_task_clazz = getattr(module, hparams.task_type)
self.token_classification_task: TokenClassificationTask = token_classification_task_clazz()
except AttributeError:
raise ValueError(
f"Task {hparams.task_type} needs to be defined as a TokenClassificationTask subclass in {module}. "
f"Available tasks classes are: {TokenClassificationTask.__subclasses__()}"
)
self.labels = self.token_classification_task.get_labels(hparams.labels)
self.pad_token_label_id = CrossEntropyLoss().ignore_index
super().__init__(hparams, len(self.labels), self.mode)
def forward(self, **inputs):
return self.model(**inputs)
def training_step(self, batch, batch_num):
"Compute loss and log."
inputs = {"input_ids": batch[0], "attention_mask": batch[1], "labels": batch[3]}
if self.config.model_type != "distilbert":
inputs["token_type_ids"] = (
batch[2] if self.config.model_type in ["bert", "xlnet"] else None
) # XLM and RoBERTa don"t use token_type_ids
outputs = self(**inputs)
loss = outputs[0]
# tensorboard_logs = {"loss": loss, "rate": self.lr_scheduler.get_last_lr()[-1]}
return {"loss": loss}
def prepare_data(self):
"Called to initialize data. Use the call to construct features"
args = self.hparams
for mode in ["train", "dev", "test"]:
cached_features_file = self._feature_file(mode)
if os.path.exists(cached_features_file) and not args.overwrite_cache:
logger.info("Loading features from cached file %s", cached_features_file)
features = torch.load(cached_features_file)
else:
logger.info("Creating features from dataset file at %s", args.data_dir)
examples = self.token_classification_task.read_examples_from_file(args.data_dir, mode)
features = self.token_classification_task.convert_examples_to_features(
examples,
self.labels,
args.max_seq_length,
self.tokenizer,
cls_token_at_end=bool(self.config.model_type in ["xlnet"]),
cls_token=self.tokenizer.cls_token,
cls_token_segment_id=2 if self.config.model_type in ["xlnet"] else 0,
sep_token=self.tokenizer.sep_token,
sep_token_extra=False,
pad_on_left=bool(self.config.model_type in ["xlnet"]),
pad_token=self.tokenizer.pad_token_id,
pad_token_segment_id=self.tokenizer.pad_token_type_id,
pad_token_label_id=self.pad_token_label_id,
)
logger.info("Saving features into cached file %s", cached_features_file)
torch.save(features, cached_features_file)
def get_dataloader(self, mode: int, batch_size: int, shuffle: bool = False) -> DataLoader:
"Load datasets. Called after prepare data."
cached_features_file = self._feature_file(mode)
logger.info("Loading features from cached file %s", cached_features_file)
features = torch.load(cached_features_file)
all_input_ids = torch.tensor([f.input_ids for f in features], dtype=torch.long)
all_attention_mask = torch.tensor([f.attention_mask for f in features], dtype=torch.long)
if features[0].token_type_ids is not None:
all_token_type_ids = torch.tensor([f.token_type_ids for f in features], dtype=torch.long)
else:
all_token_type_ids = torch.tensor([0 for f in features], dtype=torch.long)
# HACK(we will not use this anymore soon)
all_label_ids = torch.tensor([f.label_ids for f in features], dtype=torch.long)
return DataLoader(
TensorDataset(all_input_ids, all_attention_mask, all_token_type_ids, all_label_ids), batch_size=batch_size
)
def validation_step(self, batch, batch_nb):
"""Compute validation""" ""
inputs = {"input_ids": batch[0], "attention_mask": batch[1], "labels": batch[3]}
if self.config.model_type != "distilbert":
inputs["token_type_ids"] = (
batch[2] if self.config.model_type in ["bert", "xlnet"] else None
) # XLM and RoBERTa don"t use token_type_ids
outputs = self(**inputs)
tmp_eval_loss, logits = outputs[:2]
preds = logits.detach().cpu().numpy()
out_label_ids = inputs["labels"].detach().cpu().numpy()
return {"val_loss": tmp_eval_loss.detach().cpu(), "pred": preds, "target": out_label_ids}
def _eval_end(self, outputs):
"Evaluation called for both Val and Test"
val_loss_mean = torch.stack([x["val_loss"] for x in outputs]).mean()
preds = np.concatenate([x["pred"] for x in outputs], axis=0)
preds = np.argmax(preds, axis=2)
out_label_ids = np.concatenate([x["target"] for x in outputs], axis=0)
label_map = {i: label for i, label in enumerate(self.labels)}
out_label_list = [[] for _ in range(out_label_ids.shape[0])]
preds_list = [[] for _ in range(out_label_ids.shape[0])]
for i in range(out_label_ids.shape[0]):
for j in range(out_label_ids.shape[1]):
if out_label_ids[i, j] != self.pad_token_label_id:
out_label_list[i].append(label_map[out_label_ids[i][j]])
preds_list[i].append(label_map[preds[i][j]])
results = {
"val_loss": val_loss_mean,
"accuracy_score": accuracy_score(out_label_list, preds_list),
"precision": precision_score(out_label_list, preds_list),
"recall": recall_score(out_label_list, preds_list),
"f1": f1_score(out_label_list, preds_list),
}
ret = {k: v for k, v in results.items()}
ret["log"] = results
return ret, preds_list, out_label_list
def validation_epoch_end(self, outputs):
# when stable
ret, preds, targets = self._eval_end(outputs)
logs = ret["log"]
return {"val_loss": logs["val_loss"], "log": logs, "progress_bar": logs}
def test_epoch_end(self, outputs):
# updating to test_epoch_end instead of deprecated test_end
ret, predictions, targets = self._eval_end(outputs)
# Converting to the dict required by pl
# https://github.com/PyTorchLightning/pytorch-lightning/blob/master/\
# pytorch_lightning/trainer/logging.py#L139
logs = ret["log"]
# `val_loss` is the key returned by `self._eval_end()` but actually refers to `test_loss`
return {"avg_test_loss": logs["val_loss"], "log": logs, "progress_bar": logs}
@staticmethod
def add_model_specific_args(parser, root_dir):
# Add NER specific options
BaseTransformer.add_model_specific_args(parser, root_dir)
parser.add_argument(
"--task_type", default="NER", type=str, help="Task type to fine tune in training (e.g. NER, POS, etc)"
)
parser.add_argument(
"--max_seq_length",
default=128,
type=int,
help="The maximum total input sequence length after tokenization. Sequences longer "
"than this will be truncated, sequences shorter will be padded.",
)
parser.add_argument(
"--labels",
default="",
type=str,
help="Path to a file containing all labels. If not specified, CoNLL-2003 labels are used.",
)
parser.add_argument(
"--gpus",
default=0,
type=int,
help="The number of GPUs allocated for this, it is by default 0 meaning none",
)
parser.add_argument(
"--overwrite_cache", action="store_true", help="Overwrite the cached training and evaluation sets"
)
return parser
if __name__ == "__main__":
parser = argparse.ArgumentParser()
add_generic_args(parser, os.getcwd())
parser = NERTransformer.add_model_specific_args(parser, os.getcwd())
args = parser.parse_args()
model = NERTransformer(args)
trainer = generic_train(model, args)
if args.do_predict:
# See https://github.com/huggingface/transformers/issues/3159
# pl use this default format to create a checkpoint:
# https://github.com/PyTorchLightning/pytorch-lightning/blob/master\
# /pytorch_lightning/callbacks/model_checkpoint.py#L322
checkpoints = list(sorted(glob.glob(os.path.join(args.output_dir, "checkpoint-epoch=*.ckpt"), recursive=True)))
model = model.load_from_checkpoint(checkpoints[-1])
trainer.test(model)
| 9,690 | 43.865741 | 119 | py |
robust-transformers | robust-transformers-main/examples/legacy/token-classification/run_ner.py | # coding=utf-8
# Copyright 2018 The Google AI Language Team Authors and The HuggingFace Inc. team.
# Copyright (c) 2018, NVIDIA CORPORATION. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
""" Fine-tuning the library models for named entity recognition on CoNLL-2003. """
import logging
import os
import sys
from dataclasses import dataclass, field
from importlib import import_module
from typing import Dict, List, Optional, Tuple
import numpy as np
from seqeval.metrics import accuracy_score, f1_score, precision_score, recall_score
from torch import nn
import transformers
from transformers import (
AutoConfig,
AutoModelForTokenClassification,
AutoTokenizer,
DataCollatorWithPadding,
EvalPrediction,
HfArgumentParser,
Trainer,
TrainingArguments,
set_seed,
)
from transformers.trainer_utils import is_main_process
from utils_ner import Split, TokenClassificationDataset, TokenClassificationTask
logger = logging.getLogger(__name__)
@dataclass
class ModelArguments:
"""
Arguments pertaining to which model/config/tokenizer we are going to fine-tune from.
"""
model_name_or_path: str = field(
metadata={"help": "Path to pretrained model or model identifier from huggingface.co/models"}
)
config_name: Optional[str] = field(
default=None, metadata={"help": "Pretrained config name or path if not the same as model_name"}
)
task_type: Optional[str] = field(
default="NER", metadata={"help": "Task type to fine tune in training (e.g. NER, POS, etc)"}
)
tokenizer_name: Optional[str] = field(
default=None, metadata={"help": "Pretrained tokenizer name or path if not the same as model_name"}
)
use_fast: bool = field(default=False, metadata={"help": "Set this flag to use fast tokenization."})
# If you want to tweak more attributes on your tokenizer, you should do it in a distinct script,
# or just modify its tokenizer_config.json.
cache_dir: Optional[str] = field(
default=None,
metadata={"help": "Where do you want to store the pretrained models downloaded from huggingface.co"},
)
@dataclass
class DataTrainingArguments:
"""
Arguments pertaining to what data we are going to input our model for training and eval.
"""
data_dir: str = field(
metadata={"help": "The input data dir. Should contain the .txt files for a CoNLL-2003-formatted task."}
)
labels: Optional[str] = field(
default=None,
metadata={"help": "Path to a file containing all labels. If not specified, CoNLL-2003 labels are used."},
)
max_seq_length: int = field(
default=128,
metadata={
"help": "The maximum total input sequence length after tokenization. Sequences longer "
"than this will be truncated, sequences shorter will be padded."
},
)
overwrite_cache: bool = field(
default=False, metadata={"help": "Overwrite the cached training and evaluation sets"}
)
def main():
# See all possible arguments in src/transformers/training_args.py
# or by passing the --help flag to this script.
# We now keep distinct sets of args, for a cleaner separation of concerns.
parser = HfArgumentParser((ModelArguments, DataTrainingArguments, TrainingArguments))
if len(sys.argv) == 2 and sys.argv[1].endswith(".json"):
# If we pass only one argument to the script and it's the path to a json file,
# let's parse it to get our arguments.
model_args, data_args, training_args = parser.parse_json_file(json_file=os.path.abspath(sys.argv[1]))
else:
model_args, data_args, training_args = parser.parse_args_into_dataclasses()
if (
os.path.exists(training_args.output_dir)
and os.listdir(training_args.output_dir)
and training_args.do_train
and not training_args.overwrite_output_dir
):
raise ValueError(
f"Output directory ({training_args.output_dir}) already exists and is not empty. Use --overwrite_output_dir to overcome."
)
module = import_module("tasks")
try:
token_classification_task_clazz = getattr(module, model_args.task_type)
token_classification_task: TokenClassificationTask = token_classification_task_clazz()
except AttributeError:
raise ValueError(
f"Task {model_args.task_type} needs to be defined as a TokenClassificationTask subclass in {module}. "
f"Available tasks classes are: {TokenClassificationTask.__subclasses__()}"
)
# Setup logging
logging.basicConfig(
format="%(asctime)s - %(levelname)s - %(name)s - %(message)s",
datefmt="%m/%d/%Y %H:%M:%S",
level=logging.INFO if training_args.local_rank in [-1, 0] else logging.WARN,
)
logger.warning(
"Process rank: %s, device: %s, n_gpu: %s, distributed training: %s, 16-bits training: %s",
training_args.local_rank,
training_args.device,
training_args.n_gpu,
bool(training_args.local_rank != -1),
training_args.fp16,
)
# Set the verbosity to info of the Transformers logger (on main process only):
if is_main_process(training_args.local_rank):
transformers.utils.logging.set_verbosity_info()
transformers.utils.logging.enable_default_handler()
transformers.utils.logging.enable_explicit_format()
logger.info("Training/evaluation parameters %s", training_args)
# Set seed
set_seed(training_args.seed)
# Prepare CONLL-2003 task
labels = token_classification_task.get_labels(data_args.labels)
label_map: Dict[int, str] = {i: label for i, label in enumerate(labels)}
num_labels = len(labels)
# Load pretrained model and tokenizer
#
# Distributed training:
# The .from_pretrained methods guarantee that only one local process can concurrently
# download model & vocab.
config = AutoConfig.from_pretrained(
model_args.config_name if model_args.config_name else model_args.model_name_or_path,
num_labels=num_labels,
id2label=label_map,
label2id={label: i for i, label in enumerate(labels)},
cache_dir=model_args.cache_dir,
)
tokenizer = AutoTokenizer.from_pretrained(
model_args.tokenizer_name if model_args.tokenizer_name else model_args.model_name_or_path,
cache_dir=model_args.cache_dir,
use_fast=model_args.use_fast,
)
model = AutoModelForTokenClassification.from_pretrained(
model_args.model_name_or_path,
from_tf=bool(".ckpt" in model_args.model_name_or_path),
config=config,
cache_dir=model_args.cache_dir,
)
# Get datasets
train_dataset = (
TokenClassificationDataset(
token_classification_task=token_classification_task,
data_dir=data_args.data_dir,
tokenizer=tokenizer,
labels=labels,
model_type=config.model_type,
max_seq_length=data_args.max_seq_length,
overwrite_cache=data_args.overwrite_cache,
mode=Split.train,
)
if training_args.do_train
else None
)
eval_dataset = (
TokenClassificationDataset(
token_classification_task=token_classification_task,
data_dir=data_args.data_dir,
tokenizer=tokenizer,
labels=labels,
model_type=config.model_type,
max_seq_length=data_args.max_seq_length,
overwrite_cache=data_args.overwrite_cache,
mode=Split.dev,
)
if training_args.do_eval
else None
)
def align_predictions(predictions: np.ndarray, label_ids: np.ndarray) -> Tuple[List[int], List[int]]:
preds = np.argmax(predictions, axis=2)
batch_size, seq_len = preds.shape
out_label_list = [[] for _ in range(batch_size)]
preds_list = [[] for _ in range(batch_size)]
for i in range(batch_size):
for j in range(seq_len):
if label_ids[i, j] != nn.CrossEntropyLoss().ignore_index:
out_label_list[i].append(label_map[label_ids[i][j]])
preds_list[i].append(label_map[preds[i][j]])
return preds_list, out_label_list
def compute_metrics(p: EvalPrediction) -> Dict:
preds_list, out_label_list = align_predictions(p.predictions, p.label_ids)
return {
"accuracy_score": accuracy_score(out_label_list, preds_list),
"precision": precision_score(out_label_list, preds_list),
"recall": recall_score(out_label_list, preds_list),
"f1": f1_score(out_label_list, preds_list),
}
# Data collator
data_collator = DataCollatorWithPadding(tokenizer, pad_to_multiple_of=8) if training_args.fp16 else None
# Initialize our Trainer
trainer = Trainer(
model=model,
args=training_args,
train_dataset=train_dataset,
eval_dataset=eval_dataset,
compute_metrics=compute_metrics,
data_collator=data_collator,
)
# Training
if training_args.do_train:
trainer.train(
model_path=model_args.model_name_or_path if os.path.isdir(model_args.model_name_or_path) else None
)
trainer.save_model()
# For convenience, we also re-save the tokenizer to the same directory,
# so that you can share your model easily on huggingface.co/models =)
if trainer.is_world_process_zero():
tokenizer.save_pretrained(training_args.output_dir)
# Evaluation
results = {}
if training_args.do_eval:
logger.info("*** Evaluate ***")
result = trainer.evaluate()
output_eval_file = os.path.join(training_args.output_dir, "eval_results.txt")
if trainer.is_world_process_zero():
with open(output_eval_file, "w") as writer:
logger.info("***** Eval results *****")
for key, value in result.items():
logger.info(" %s = %s", key, value)
writer.write("%s = %s\n" % (key, value))
results.update(result)
# Predict
if training_args.do_predict:
test_dataset = TokenClassificationDataset(
token_classification_task=token_classification_task,
data_dir=data_args.data_dir,
tokenizer=tokenizer,
labels=labels,
model_type=config.model_type,
max_seq_length=data_args.max_seq_length,
overwrite_cache=data_args.overwrite_cache,
mode=Split.test,
)
predictions, label_ids, metrics = trainer.predict(test_dataset)
preds_list, _ = align_predictions(predictions, label_ids)
output_test_results_file = os.path.join(training_args.output_dir, "test_results.txt")
if trainer.is_world_process_zero():
with open(output_test_results_file, "w") as writer:
for key, value in metrics.items():
logger.info(" %s = %s", key, value)
writer.write("%s = %s\n" % (key, value))
# Save predictions
output_test_predictions_file = os.path.join(training_args.output_dir, "test_predictions.txt")
if trainer.is_world_process_zero():
with open(output_test_predictions_file, "w") as writer:
with open(os.path.join(data_args.data_dir, "test.txt"), "r") as f:
token_classification_task.write_predictions_to_file(writer, f, preds_list)
return results
def _mp_fn(index):
# For xla_spawn (TPUs)
main()
if __name__ == "__main__":
main()
| 12,219 | 36.950311 | 133 | py |
robust-transformers | robust-transformers-main/examples/legacy/token-classification/utils_ner.py | # coding=utf-8
# Copyright 2018 The Google AI Language Team Authors and The HuggingFace Inc. team.
# Copyright (c) 2018, NVIDIA CORPORATION. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
""" Named entity recognition fine-tuning: utilities to work with CoNLL-2003 task. """
import logging
import os
from dataclasses import dataclass
from enum import Enum
from typing import List, Optional, Union
from filelock import FileLock
from transformers import PreTrainedTokenizer, is_tf_available, is_torch_available
logger = logging.getLogger(__name__)
@dataclass
class InputExample:
"""
A single training/test example for token classification.
Args:
guid: Unique id for the example.
words: list. The words of the sequence.
labels: (Optional) list. The labels for each word of the sequence. This should be
specified for train and dev examples, but not for test examples.
"""
guid: str
words: List[str]
labels: Optional[List[str]]
@dataclass
class InputFeatures:
"""
A single set of features of data.
Property names are the same names as the corresponding inputs to a model.
"""
input_ids: List[int]
attention_mask: List[int]
token_type_ids: Optional[List[int]] = None
label_ids: Optional[List[int]] = None
class Split(Enum):
train = "train"
dev = "dev"
test = "test"
class TokenClassificationTask:
@staticmethod
def read_examples_from_file(data_dir, mode: Union[Split, str]) -> List[InputExample]:
raise NotImplementedError
@staticmethod
def get_labels(path: str) -> List[str]:
raise NotImplementedError
@staticmethod
def convert_examples_to_features(
examples: List[InputExample],
label_list: List[str],
max_seq_length: int,
tokenizer: PreTrainedTokenizer,
cls_token_at_end=False,
cls_token="[CLS]",
cls_token_segment_id=1,
sep_token="[SEP]",
sep_token_extra=False,
pad_on_left=False,
pad_token=0,
pad_token_segment_id=0,
pad_token_label_id=-100,
sequence_a_segment_id=0,
mask_padding_with_zero=True,
) -> List[InputFeatures]:
"""Loads a data file into a list of `InputFeatures`
`cls_token_at_end` define the location of the CLS token:
- False (Default, BERT/XLM pattern): [CLS] + A + [SEP] + B + [SEP]
- True (XLNet/GPT pattern): A + [SEP] + B + [SEP] + [CLS]
`cls_token_segment_id` define the segment id associated to the CLS token (0 for BERT, 2 for XLNet)
"""
# TODO clean up all this to leverage built-in features of tokenizers
label_map = {label: i for i, label in enumerate(label_list)}
features = []
for (ex_index, example) in enumerate(examples):
if ex_index % 10_000 == 0:
logger.info("Writing example %d of %d", ex_index, len(examples))
tokens = []
label_ids = []
for word, label in zip(example.words, example.labels):
word_tokens = tokenizer.tokenize(word)
# bert-base-multilingual-cased sometimes output "nothing ([]) when calling tokenize with just a space.
if len(word_tokens) > 0:
tokens.extend(word_tokens)
# Use the real label id for the first token of the word, and padding ids for the remaining tokens
label_ids.extend([label_map[label]] + [pad_token_label_id] * (len(word_tokens) - 1))
# Account for [CLS] and [SEP] with "- 2" and with "- 3" for RoBERTa.
special_tokens_count = tokenizer.num_special_tokens_to_add()
if len(tokens) > max_seq_length - special_tokens_count:
tokens = tokens[: (max_seq_length - special_tokens_count)]
label_ids = label_ids[: (max_seq_length - special_tokens_count)]
# The convention in BERT is:
# (a) For sequence pairs:
# tokens: [CLS] is this jack ##son ##ville ? [SEP] no it is not . [SEP]
# type_ids: 0 0 0 0 0 0 0 0 1 1 1 1 1 1
# (b) For single sequences:
# tokens: [CLS] the dog is hairy . [SEP]
# type_ids: 0 0 0 0 0 0 0
#
# Where "type_ids" are used to indicate whether this is the first
# sequence or the second sequence. The embedding vectors for `type=0` and
# `type=1` were learned during pre-training and are added to the wordpiece
# embedding vector (and position vector). This is not *strictly* necessary
# since the [SEP] token unambiguously separates the sequences, but it makes
# it easier for the model to learn the concept of sequences.
#
# For classification tasks, the first vector (corresponding to [CLS]) is
# used as as the "sentence vector". Note that this only makes sense because
# the entire model is fine-tuned.
tokens += [sep_token]
label_ids += [pad_token_label_id]
if sep_token_extra:
# roberta uses an extra separator b/w pairs of sentences
tokens += [sep_token]
label_ids += [pad_token_label_id]
segment_ids = [sequence_a_segment_id] * len(tokens)
if cls_token_at_end:
tokens += [cls_token]
label_ids += [pad_token_label_id]
segment_ids += [cls_token_segment_id]
else:
tokens = [cls_token] + tokens
label_ids = [pad_token_label_id] + label_ids
segment_ids = [cls_token_segment_id] + segment_ids
input_ids = tokenizer.convert_tokens_to_ids(tokens)
# The mask has 1 for real tokens and 0 for padding tokens. Only real
# tokens are attended to.
input_mask = [1 if mask_padding_with_zero else 0] * len(input_ids)
# Zero-pad up to the sequence length.
padding_length = max_seq_length - len(input_ids)
if pad_on_left:
input_ids = ([pad_token] * padding_length) + input_ids
input_mask = ([0 if mask_padding_with_zero else 1] * padding_length) + input_mask
segment_ids = ([pad_token_segment_id] * padding_length) + segment_ids
label_ids = ([pad_token_label_id] * padding_length) + label_ids
else:
input_ids += [pad_token] * padding_length
input_mask += [0 if mask_padding_with_zero else 1] * padding_length
segment_ids += [pad_token_segment_id] * padding_length
label_ids += [pad_token_label_id] * padding_length
assert len(input_ids) == max_seq_length
assert len(input_mask) == max_seq_length
assert len(segment_ids) == max_seq_length
assert len(label_ids) == max_seq_length
if ex_index < 5:
logger.info("*** Example ***")
logger.info("guid: %s", example.guid)
logger.info("tokens: %s", " ".join([str(x) for x in tokens]))
logger.info("input_ids: %s", " ".join([str(x) for x in input_ids]))
logger.info("input_mask: %s", " ".join([str(x) for x in input_mask]))
logger.info("segment_ids: %s", " ".join([str(x) for x in segment_ids]))
logger.info("label_ids: %s", " ".join([str(x) for x in label_ids]))
if "token_type_ids" not in tokenizer.model_input_names:
segment_ids = None
features.append(
InputFeatures(
input_ids=input_ids, attention_mask=input_mask, token_type_ids=segment_ids, label_ids=label_ids
)
)
return features
if is_torch_available():
import torch
from torch import nn
from torch.utils.data import Dataset
class TokenClassificationDataset(Dataset):
"""
This will be superseded by a framework-agnostic approach
soon.
"""
features: List[InputFeatures]
pad_token_label_id: int = nn.CrossEntropyLoss().ignore_index
# Use cross entropy ignore_index as padding label id so that only
# real label ids contribute to the loss later.
def __init__(
self,
token_classification_task: TokenClassificationTask,
data_dir: str,
tokenizer: PreTrainedTokenizer,
labels: List[str],
model_type: str,
max_seq_length: Optional[int] = None,
overwrite_cache=False,
mode: Split = Split.train,
):
# Load data features from cache or dataset file
cached_features_file = os.path.join(
data_dir,
"cached_{}_{}_{}".format(mode.value, tokenizer.__class__.__name__, str(max_seq_length)),
)
# Make sure only the first process in distributed training processes the dataset,
# and the others will use the cache.
lock_path = cached_features_file + ".lock"
with FileLock(lock_path):
if os.path.exists(cached_features_file) and not overwrite_cache:
logger.info(f"Loading features from cached file {cached_features_file}")
self.features = torch.load(cached_features_file)
else:
logger.info(f"Creating features from dataset file at {data_dir}")
examples = token_classification_task.read_examples_from_file(data_dir, mode)
# TODO clean up all this to leverage built-in features of tokenizers
self.features = token_classification_task.convert_examples_to_features(
examples,
labels,
max_seq_length,
tokenizer,
cls_token_at_end=bool(model_type in ["xlnet"]),
# xlnet has a cls token at the end
cls_token=tokenizer.cls_token,
cls_token_segment_id=2 if model_type in ["xlnet"] else 0,
sep_token=tokenizer.sep_token,
sep_token_extra=False,
# roberta uses an extra separator b/w pairs of sentences, cf. github.com/pytorch/fairseq/commit/1684e166e3da03f5b600dbb7855cb98ddfcd0805
pad_on_left=bool(tokenizer.padding_side == "left"),
pad_token=tokenizer.pad_token_id,
pad_token_segment_id=tokenizer.pad_token_type_id,
pad_token_label_id=self.pad_token_label_id,
)
logger.info(f"Saving features into cached file {cached_features_file}")
torch.save(self.features, cached_features_file)
def __len__(self):
return len(self.features)
def __getitem__(self, i) -> InputFeatures:
return self.features[i]
if is_tf_available():
import tensorflow as tf
class TFTokenClassificationDataset:
"""
This will be superseded by a framework-agnostic approach
soon.
"""
features: List[InputFeatures]
pad_token_label_id: int = -100
# Use cross entropy ignore_index as padding label id so that only
# real label ids contribute to the loss later.
def __init__(
self,
token_classification_task: TokenClassificationTask,
data_dir: str,
tokenizer: PreTrainedTokenizer,
labels: List[str],
model_type: str,
max_seq_length: Optional[int] = None,
overwrite_cache=False,
mode: Split = Split.train,
):
examples = token_classification_task.read_examples_from_file(data_dir, mode)
# TODO clean up all this to leverage built-in features of tokenizers
self.features = token_classification_task.convert_examples_to_features(
examples,
labels,
max_seq_length,
tokenizer,
cls_token_at_end=bool(model_type in ["xlnet"]),
# xlnet has a cls token at the end
cls_token=tokenizer.cls_token,
cls_token_segment_id=2 if model_type in ["xlnet"] else 0,
sep_token=tokenizer.sep_token,
sep_token_extra=False,
# roberta uses an extra separator b/w pairs of sentences, cf. github.com/pytorch/fairseq/commit/1684e166e3da03f5b600dbb7855cb98ddfcd0805
pad_on_left=bool(tokenizer.padding_side == "left"),
pad_token=tokenizer.pad_token_id,
pad_token_segment_id=tokenizer.pad_token_type_id,
pad_token_label_id=self.pad_token_label_id,
)
def gen():
for ex in self.features:
if ex.token_type_ids is None:
yield (
{"input_ids": ex.input_ids, "attention_mask": ex.attention_mask},
ex.label_ids,
)
else:
yield (
{
"input_ids": ex.input_ids,
"attention_mask": ex.attention_mask,
"token_type_ids": ex.token_type_ids,
},
ex.label_ids,
)
if "token_type_ids" not in tokenizer.model_input_names:
self.dataset = tf.data.Dataset.from_generator(
gen,
({"input_ids": tf.int32, "attention_mask": tf.int32}, tf.int64),
(
{"input_ids": tf.TensorShape([None]), "attention_mask": tf.TensorShape([None])},
tf.TensorShape([None]),
),
)
else:
self.dataset = tf.data.Dataset.from_generator(
gen,
({"input_ids": tf.int32, "attention_mask": tf.int32, "token_type_ids": tf.int32}, tf.int64),
(
{
"input_ids": tf.TensorShape([None]),
"attention_mask": tf.TensorShape([None]),
"token_type_ids": tf.TensorShape([None]),
},
tf.TensorShape([None]),
),
)
def get_dataset(self):
self.dataset = self.dataset.apply(tf.data.experimental.assert_cardinality(len(self.features)))
return self.dataset
def __len__(self):
return len(self.features)
def __getitem__(self, i) -> InputFeatures:
return self.features[i]
| 15,649 | 40.957105 | 160 | py |
robust-transformers | robust-transformers-main/examples/legacy/multiple_choice/utils_multiple_choice.py | # coding=utf-8
# Copyright 2018 The Google AI Language Team Authors and The HuggingFace Inc. team.
# Copyright (c) 2018, NVIDIA CORPORATION. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
""" Multiple choice fine-tuning: utilities to work with multiple choice tasks of reading comprehension """
import csv
import glob
import json
import logging
import os
from dataclasses import dataclass
from enum import Enum
from typing import List, Optional
import tqdm
from filelock import FileLock
from transformers import PreTrainedTokenizer, is_tf_available, is_torch_available
logger = logging.getLogger(__name__)
@dataclass(frozen=True)
class InputExample:
"""
A single training/test example for multiple choice
Args:
example_id: Unique id for the example.
question: string. The untokenized text of the second sequence (question).
contexts: list of str. The untokenized text of the first sequence (context of corresponding question).
endings: list of str. multiple choice's options. Its length must be equal to contexts' length.
label: (Optional) string. The label of the example. This should be
specified for train and dev examples, but not for test examples.
"""
example_id: str
question: str
contexts: List[str]
endings: List[str]
label: Optional[str]
@dataclass(frozen=True)
class InputFeatures:
"""
A single set of features of data.
Property names are the same names as the corresponding inputs to a model.
"""
example_id: str
input_ids: List[List[int]]
attention_mask: Optional[List[List[int]]]
token_type_ids: Optional[List[List[int]]]
label: Optional[int]
class Split(Enum):
train = "train"
dev = "dev"
test = "test"
if is_torch_available():
import torch
from torch.utils.data import Dataset
class MultipleChoiceDataset(Dataset):
"""
This will be superseded by a framework-agnostic approach
soon.
"""
features: List[InputFeatures]
def __init__(
self,
data_dir: str,
tokenizer: PreTrainedTokenizer,
task: str,
max_seq_length: Optional[int] = None,
overwrite_cache=False,
mode: Split = Split.train,
):
processor = processors[task]()
cached_features_file = os.path.join(
data_dir,
"cached_{}_{}_{}_{}".format(
mode.value,
tokenizer.__class__.__name__,
str(max_seq_length),
task,
),
)
# Make sure only the first process in distributed training processes the dataset,
# and the others will use the cache.
lock_path = cached_features_file + ".lock"
with FileLock(lock_path):
if os.path.exists(cached_features_file) and not overwrite_cache:
logger.info(f"Loading features from cached file {cached_features_file}")
self.features = torch.load(cached_features_file)
else:
logger.info(f"Creating features from dataset file at {data_dir}")
label_list = processor.get_labels()
if mode == Split.dev:
examples = processor.get_dev_examples(data_dir)
elif mode == Split.test:
examples = processor.get_test_examples(data_dir)
else:
examples = processor.get_train_examples(data_dir)
logger.info("Training examples: %s", len(examples))
self.features = convert_examples_to_features(
examples,
label_list,
max_seq_length,
tokenizer,
)
logger.info("Saving features into cached file %s", cached_features_file)
torch.save(self.features, cached_features_file)
def __len__(self):
return len(self.features)
def __getitem__(self, i) -> InputFeatures:
return self.features[i]
if is_tf_available():
import tensorflow as tf
class TFMultipleChoiceDataset:
"""
This will be superseded by a framework-agnostic approach
soon.
"""
features: List[InputFeatures]
def __init__(
self,
data_dir: str,
tokenizer: PreTrainedTokenizer,
task: str,
max_seq_length: Optional[int] = 128,
overwrite_cache=False,
mode: Split = Split.train,
):
processor = processors[task]()
logger.info(f"Creating features from dataset file at {data_dir}")
label_list = processor.get_labels()
if mode == Split.dev:
examples = processor.get_dev_examples(data_dir)
elif mode == Split.test:
examples = processor.get_test_examples(data_dir)
else:
examples = processor.get_train_examples(data_dir)
logger.info("Training examples: %s", len(examples))
self.features = convert_examples_to_features(
examples,
label_list,
max_seq_length,
tokenizer,
)
def gen():
for (ex_index, ex) in tqdm.tqdm(enumerate(self.features), desc="convert examples to features"):
if ex_index % 10000 == 0:
logger.info("Writing example %d of %d" % (ex_index, len(examples)))
yield (
{
"example_id": 0,
"input_ids": ex.input_ids,
"attention_mask": ex.attention_mask,
"token_type_ids": ex.token_type_ids,
},
ex.label,
)
self.dataset = tf.data.Dataset.from_generator(
gen,
(
{
"example_id": tf.int32,
"input_ids": tf.int32,
"attention_mask": tf.int32,
"token_type_ids": tf.int32,
},
tf.int64,
),
(
{
"example_id": tf.TensorShape([]),
"input_ids": tf.TensorShape([None, None]),
"attention_mask": tf.TensorShape([None, None]),
"token_type_ids": tf.TensorShape([None, None]),
},
tf.TensorShape([]),
),
)
def get_dataset(self):
self.dataset = self.dataset.apply(tf.data.experimental.assert_cardinality(len(self.features)))
return self.dataset
def __len__(self):
return len(self.features)
def __getitem__(self, i) -> InputFeatures:
return self.features[i]
class DataProcessor:
"""Base class for data converters for multiple choice data sets."""
def get_train_examples(self, data_dir):
"""Gets a collection of `InputExample`s for the train set."""
raise NotImplementedError()
def get_dev_examples(self, data_dir):
"""Gets a collection of `InputExample`s for the dev set."""
raise NotImplementedError()
def get_test_examples(self, data_dir):
"""Gets a collection of `InputExample`s for the test set."""
raise NotImplementedError()
def get_labels(self):
"""Gets the list of labels for this data set."""
raise NotImplementedError()
class RaceProcessor(DataProcessor):
"""Processor for the RACE data set."""
def get_train_examples(self, data_dir):
"""See base class."""
logger.info("LOOKING AT {} train".format(data_dir))
high = os.path.join(data_dir, "train/high")
middle = os.path.join(data_dir, "train/middle")
high = self._read_txt(high)
middle = self._read_txt(middle)
return self._create_examples(high + middle, "train")
def get_dev_examples(self, data_dir):
"""See base class."""
logger.info("LOOKING AT {} dev".format(data_dir))
high = os.path.join(data_dir, "dev/high")
middle = os.path.join(data_dir, "dev/middle")
high = self._read_txt(high)
middle = self._read_txt(middle)
return self._create_examples(high + middle, "dev")
def get_test_examples(self, data_dir):
"""See base class."""
logger.info("LOOKING AT {} test".format(data_dir))
high = os.path.join(data_dir, "test/high")
middle = os.path.join(data_dir, "test/middle")
high = self._read_txt(high)
middle = self._read_txt(middle)
return self._create_examples(high + middle, "test")
def get_labels(self):
"""See base class."""
return ["0", "1", "2", "3"]
def _read_txt(self, input_dir):
lines = []
files = glob.glob(input_dir + "/*txt")
for file in tqdm.tqdm(files, desc="read files"):
with open(file, "r", encoding="utf-8") as fin:
data_raw = json.load(fin)
data_raw["race_id"] = file
lines.append(data_raw)
return lines
def _create_examples(self, lines, set_type):
"""Creates examples for the training and dev sets."""
examples = []
for (_, data_raw) in enumerate(lines):
race_id = "%s-%s" % (set_type, data_raw["race_id"])
article = data_raw["article"]
for i in range(len(data_raw["answers"])):
truth = str(ord(data_raw["answers"][i]) - ord("A"))
question = data_raw["questions"][i]
options = data_raw["options"][i]
examples.append(
InputExample(
example_id=race_id,
question=question,
contexts=[article, article, article, article], # this is not efficient but convenient
endings=[options[0], options[1], options[2], options[3]],
label=truth,
)
)
return examples
class SynonymProcessor(DataProcessor):
"""Processor for the Synonym data set."""
def get_train_examples(self, data_dir):
"""See base class."""
logger.info("LOOKING AT {} train".format(data_dir))
return self._create_examples(self._read_csv(os.path.join(data_dir, "mctrain.csv")), "train")
def get_dev_examples(self, data_dir):
"""See base class."""
logger.info("LOOKING AT {} dev".format(data_dir))
return self._create_examples(self._read_csv(os.path.join(data_dir, "mchp.csv")), "dev")
def get_test_examples(self, data_dir):
"""See base class."""
logger.info("LOOKING AT {} dev".format(data_dir))
return self._create_examples(self._read_csv(os.path.join(data_dir, "mctest.csv")), "test")
def get_labels(self):
"""See base class."""
return ["0", "1", "2", "3", "4"]
def _read_csv(self, input_file):
with open(input_file, "r", encoding="utf-8") as f:
return list(csv.reader(f))
def _create_examples(self, lines: List[List[str]], type: str):
"""Creates examples for the training and dev sets."""
examples = [
InputExample(
example_id=line[0],
question="", # in the swag dataset, the
# common beginning of each
# choice is stored in "sent2".
contexts=[line[1], line[1], line[1], line[1], line[1]],
endings=[line[2], line[3], line[4], line[5], line[6]],
label=line[7],
)
for line in lines # we skip the line with the column names
]
return examples
class SwagProcessor(DataProcessor):
"""Processor for the SWAG data set."""
def get_train_examples(self, data_dir):
"""See base class."""
logger.info("LOOKING AT {} train".format(data_dir))
return self._create_examples(self._read_csv(os.path.join(data_dir, "train.csv")), "train")
def get_dev_examples(self, data_dir):
"""See base class."""
logger.info("LOOKING AT {} dev".format(data_dir))
return self._create_examples(self._read_csv(os.path.join(data_dir, "val.csv")), "dev")
def get_test_examples(self, data_dir):
"""See base class."""
logger.info("LOOKING AT {} dev".format(data_dir))
raise ValueError(
"For swag testing, the input file does not contain a label column. It can not be tested in current code"
"setting!"
)
return self._create_examples(self._read_csv(os.path.join(data_dir, "test.csv")), "test")
def get_labels(self):
"""See base class."""
return ["0", "1", "2", "3"]
def _read_csv(self, input_file):
with open(input_file, "r", encoding="utf-8") as f:
return list(csv.reader(f))
def _create_examples(self, lines: List[List[str]], type: str):
"""Creates examples for the training and dev sets."""
if type == "train" and lines[0][-1] != "label":
raise ValueError("For training, the input file must contain a label column.")
examples = [
InputExample(
example_id=line[2],
question=line[5], # in the swag dataset, the
# common beginning of each
# choice is stored in "sent2".
contexts=[line[4], line[4], line[4], line[4]],
endings=[line[7], line[8], line[9], line[10]],
label=line[11],
)
for line in lines[1:] # we skip the line with the column names
]
return examples
class ArcProcessor(DataProcessor):
"""Processor for the ARC data set (request from allennlp)."""
def get_train_examples(self, data_dir):
"""See base class."""
logger.info("LOOKING AT {} train".format(data_dir))
return self._create_examples(self._read_json(os.path.join(data_dir, "train.jsonl")), "train")
def get_dev_examples(self, data_dir):
"""See base class."""
logger.info("LOOKING AT {} dev".format(data_dir))
return self._create_examples(self._read_json(os.path.join(data_dir, "dev.jsonl")), "dev")
def get_test_examples(self, data_dir):
logger.info("LOOKING AT {} test".format(data_dir))
return self._create_examples(self._read_json(os.path.join(data_dir, "test.jsonl")), "test")
def get_labels(self):
"""See base class."""
return ["0", "1", "2", "3"]
def _read_json(self, input_file):
with open(input_file, "r", encoding="utf-8") as fin:
lines = fin.readlines()
return lines
def _create_examples(self, lines, type):
"""Creates examples for the training and dev sets."""
# There are two types of labels. They should be normalized
def normalize(truth):
if truth in "ABCD":
return ord(truth) - ord("A")
elif truth in "1234":
return int(truth) - 1
else:
logger.info("truth ERROR! %s", str(truth))
return None
examples = []
three_choice = 0
four_choice = 0
five_choice = 0
other_choices = 0
# we deleted example which has more than or less than four choices
for line in tqdm.tqdm(lines, desc="read arc data"):
data_raw = json.loads(line.strip("\n"))
if len(data_raw["question"]["choices"]) == 3:
three_choice += 1
continue
elif len(data_raw["question"]["choices"]) == 5:
five_choice += 1
continue
elif len(data_raw["question"]["choices"]) != 4:
other_choices += 1
continue
four_choice += 1
truth = str(normalize(data_raw["answerKey"]))
assert truth != "None"
question_choices = data_raw["question"]
question = question_choices["stem"]
id = data_raw["id"]
options = question_choices["choices"]
if len(options) == 4:
examples.append(
InputExample(
example_id=id,
question=question,
contexts=[
options[0]["para"].replace("_", ""),
options[1]["para"].replace("_", ""),
options[2]["para"].replace("_", ""),
options[3]["para"].replace("_", ""),
],
endings=[options[0]["text"], options[1]["text"], options[2]["text"], options[3]["text"]],
label=truth,
)
)
if type == "train":
assert len(examples) > 1
assert examples[0].label is not None
logger.info("len examples: %s}", str(len(examples)))
logger.info("Three choices: %s", str(three_choice))
logger.info("Five choices: %s", str(five_choice))
logger.info("Other choices: %s", str(other_choices))
logger.info("four choices: %s", str(four_choice))
return examples
def convert_examples_to_features(
examples: List[InputExample],
label_list: List[str],
max_length: int,
tokenizer: PreTrainedTokenizer,
) -> List[InputFeatures]:
"""
Loads a data file into a list of `InputFeatures`
"""
label_map = {label: i for i, label in enumerate(label_list)}
features = []
for (ex_index, example) in tqdm.tqdm(enumerate(examples), desc="convert examples to features"):
if ex_index % 10000 == 0:
logger.info("Writing example %d of %d" % (ex_index, len(examples)))
choices_inputs = []
for ending_idx, (context, ending) in enumerate(zip(example.contexts, example.endings)):
text_a = context
if example.question.find("_") != -1:
# this is for cloze question
text_b = example.question.replace("_", ending)
else:
text_b = example.question + " " + ending
inputs = tokenizer(
text_a,
text_b,
add_special_tokens=True,
max_length=max_length,
padding="max_length",
truncation=True,
return_overflowing_tokens=True,
)
if "num_truncated_tokens" in inputs and inputs["num_truncated_tokens"] > 0:
logger.info(
"Attention! you are cropping tokens (swag task is ok). "
"If you are training ARC and RACE and you are poping question + options,"
"you need to try to use a bigger max seq length!"
)
choices_inputs.append(inputs)
label = label_map[example.label]
input_ids = [x["input_ids"] for x in choices_inputs]
attention_mask = (
[x["attention_mask"] for x in choices_inputs] if "attention_mask" in choices_inputs[0] else None
)
token_type_ids = (
[x["token_type_ids"] for x in choices_inputs] if "token_type_ids" in choices_inputs[0] else None
)
features.append(
InputFeatures(
example_id=example.example_id,
input_ids=input_ids,
attention_mask=attention_mask,
token_type_ids=token_type_ids,
label=label,
)
)
for f in features[:2]:
logger.info("*** Example ***")
logger.info("feature: %s" % f)
return features
processors = {"race": RaceProcessor, "swag": SwagProcessor, "arc": ArcProcessor, "syn": SynonymProcessor}
MULTIPLE_CHOICE_TASKS_NUM_LABELS = {"race", 4, "swag", 4, "arc", 4, "syn", 5}
| 20,890 | 35.018966 | 116 | py |
robust-transformers | robust-transformers-main/examples/legacy/seq2seq/run_distributed_eval.py | #!/usr/bin/env python
# Copyright 2020 The HuggingFace Team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
import argparse
import shutil
import time
from json import JSONDecodeError
from logging import getLogger
from pathlib import Path
from typing import Dict, List
import torch
from torch.utils.data import DataLoader
from tqdm import tqdm
from transformers import AutoModelForSeq2SeqLM, AutoTokenizer
from utils import (
Seq2SeqDataset,
calculate_bleu,
calculate_rouge,
chunks,
lmap,
load_json,
parse_numeric_n_bool_cl_kwargs,
save_json,
use_task_specific_params,
write_txt_file,
)
logger = getLogger(__name__)
def eval_data_dir(
data_dir,
save_dir: str,
model_name: str,
bs: int = 8,
max_source_length: int = 1024,
type_path="val",
n_obs=None,
fp16=False,
task="summarization",
local_rank=None,
num_return_sequences=1,
dataset_kwargs: Dict = None,
prefix="",
**generate_kwargs,
) -> Dict:
"""Run evaluation on part of the data for one gpu and save to {save_dir}/rank_{rank}_output.json"""
model_name = str(model_name)
assert local_rank is not None
torch.distributed.init_process_group(backend="nccl", rank=local_rank)
save_dir = Path(save_dir)
save_path = save_dir.joinpath(f"rank_{local_rank}_output.json")
torch.cuda.set_device(local_rank)
model = AutoModelForSeq2SeqLM.from_pretrained(model_name).cuda()
if fp16:
model = model.half()
# determine if we need to increase num_beams
use_task_specific_params(model, task) # update config with task specific params
num_beams = generate_kwargs.pop("num_beams", model.config.num_beams) # AttributeError risk?
if num_return_sequences > num_beams:
num_beams = num_return_sequences
tokenizer = AutoTokenizer.from_pretrained(model_name)
logger.info(f"Inferred tokenizer type: {tokenizer.__class__}") # if this is wrong, check config.model_type.
if max_source_length is None:
max_source_length = tokenizer.model_max_length
if prefix is None:
prefix = prefix or getattr(model.config, "prefix", "") or ""
ds = Seq2SeqDataset(
tokenizer,
data_dir,
max_source_length,
max_target_length=1024,
type_path=type_path,
n_obs=n_obs,
prefix=prefix,
**dataset_kwargs,
)
# I set shuffle=True for a more accurate progress bar.
# If all the longest samples are first, the prog bar estimate is too high at the beginning.
sampler = ds.make_sortish_sampler(bs, distributed=True, add_extra_examples=False, shuffle=True)
data_loader = DataLoader(ds, sampler=sampler, batch_size=bs, collate_fn=ds.collate_fn)
results = []
for batch in tqdm(data_loader):
summaries = model.generate(
input_ids=batch["input_ids"].to(model.device),
attention_mask=batch["attention_mask"].to(model.device),
num_return_sequences=num_return_sequences,
num_beams=num_beams,
**generate_kwargs,
)
preds = tokenizer.batch_decode(summaries, skip_special_tokens=True, clean_up_tokenization_spaces=False)
ids = batch["ids"]
if num_return_sequences > 1:
preds = chunks(preds, num_return_sequences) # batch size chunks, each of size num_return_seq
for i, pred in enumerate(preds):
results.append(dict(pred=pred, id=ids[i].item()))
save_json(results, save_path)
return results, sampler.num_replicas
def run_generate():
parser = argparse.ArgumentParser(
epilog="Unspecified args like --num_beams=2 --decoder_start_token_id=4 are passed to model.generate"
)
parser.add_argument("--data_dir", type=str, help="like cnn_dm/test.source")
parser.add_argument(
"--model_name",
type=str,
help="like facebook/bart-large-cnn,t5-base, etc.",
default="sshleifer/distilbart-xsum-12-3",
)
parser.add_argument("--save_dir", type=str, help="where to save", default="tmp_gen")
parser.add_argument("--max_source_length", type=int, default=None)
parser.add_argument(
"--type_path", type=str, default="test", help="which subset to evaluate typically train/val/test"
)
parser.add_argument("--task", type=str, default="summarization", help="used for task_specific_params + metrics")
parser.add_argument("--bs", type=int, default=8, required=False, help="batch size")
parser.add_argument(
"--local_rank", type=int, default=-1, required=False, help="should be passed by distributed.launch"
)
parser.add_argument(
"--n_obs", type=int, default=None, required=False, help="How many observations. Defaults to all."
)
parser.add_argument(
"--num_return_sequences", type=int, default=1, required=False, help="How many sequences to return"
)
parser.add_argument(
"--sync_timeout",
type=int,
default=600,
required=False,
help="How long should master process wait for other processes to finish.",
)
parser.add_argument("--src_lang", type=str, default=None, required=False)
parser.add_argument("--tgt_lang", type=str, default=None, required=False)
parser.add_argument(
"--prefix", type=str, required=False, default=None, help="will be added to the begininng of src examples"
)
parser.add_argument("--fp16", action="store_true")
parser.add_argument("--debug", action="store_true")
start_time = time.time()
args, rest = parser.parse_known_args()
generate_kwargs = parse_numeric_n_bool_cl_kwargs(rest)
if generate_kwargs and args.local_rank <= 0:
print(f"parsed the following generate kwargs: {generate_kwargs}")
json_save_dir = Path(args.save_dir + "_tmp")
Path(json_save_dir).mkdir(exist_ok=True) # this handles locking.
intermediate_files = list(json_save_dir.glob("rank_*.json"))
if intermediate_files:
raise ValueError(f"Found files at {json_save_dir} please move or remove them.")
# In theory, a node could finish and save before another node hits this. If this happens, we can address later.
dataset_kwargs = {}
if args.src_lang is not None:
dataset_kwargs["src_lang"] = args.src_lang
if args.tgt_lang is not None:
dataset_kwargs["tgt_lang"] = args.tgt_lang
Path(args.save_dir).mkdir(exist_ok=True)
results, num_replicas = eval_data_dir(
args.data_dir,
json_save_dir,
args.model_name,
type_path=args.type_path,
bs=args.bs,
fp16=args.fp16,
task=args.task,
local_rank=args.local_rank,
n_obs=args.n_obs,
max_source_length=args.max_source_length,
num_return_sequences=args.num_return_sequences,
prefix=args.prefix,
dataset_kwargs=dataset_kwargs,
**generate_kwargs,
)
if args.local_rank <= 0:
save_dir = Path(args.save_dir)
save_dir.mkdir(exist_ok=True)
partial_results = gather_results_from_each_node(num_replicas, json_save_dir, args.sync_timeout)
preds = combine_partial_results(partial_results)
if args.num_return_sequences > 1:
save_path = save_dir.joinpath("pseudolabel_results.json")
print(f"Saving aggregated results at {save_path}, intermediate in {json_save_dir}/")
save_json(preds, save_path)
return
tgt_file = Path(args.data_dir).joinpath(args.type_path + ".target")
with open(tgt_file) as f:
labels = [x.rstrip() for x in f.readlines()][: len(preds)]
# Calculate metrics, save metrics, and save _generations.txt
calc_bleu = "translation" in args.task
score_fn = calculate_bleu if calc_bleu else calculate_rouge
metric_name = "bleu" if calc_bleu else "rouge"
metrics: Dict = score_fn(preds, labels)
metrics["n_obs"] = len(preds)
runtime = time.time() - start_time
metrics["seconds_per_sample"] = round(runtime / metrics["n_obs"], 4)
metrics["n_gpus"] = num_replicas
# TODO(@stas00): add whatever metadata to metrics
metrics_save_path = save_dir.joinpath(f"{args.type_path}_{metric_name}.json")
save_json(metrics, metrics_save_path, indent=None)
print(metrics)
write_txt_file(preds, save_dir.joinpath(f"{args.type_path}_generations.txt"))
if args.debug:
write_txt_file(labels, save_dir.joinpath(f"{args.type_path}.target"))
else:
shutil.rmtree(json_save_dir)
def combine_partial_results(partial_results) -> List:
"""Concatenate partial results into one file, then sort it by id."""
records = []
for partial_result in partial_results:
records.extend(partial_result)
records = list(sorted(records, key=lambda x: x["id"]))
preds = [x["pred"] for x in records]
return preds
def gather_results_from_each_node(num_replicas, save_dir, timeout) -> List[Dict[str, List]]:
# WAIT FOR lots of .json files
start_wait = time.time()
logger.info("waiting for all nodes to finish")
json_data = None
while (time.time() - start_wait) < timeout:
json_files = list(save_dir.glob("rank_*.json"))
if len(json_files) < num_replicas:
continue
try:
# make sure all json files are fully saved
json_data = lmap(load_json, json_files)
return json_data
except JSONDecodeError:
continue
else:
raise TimeoutError("Rank 0 gave up on waiting for other processes")
# Unreachable
if __name__ == "__main__":
# Usage for MT:
run_generate()
| 10,216 | 37.847909 | 119 | py |
robust-transformers | robust-transformers-main/examples/legacy/seq2seq/old_test_datasets.py | # Copyright 2020 The HuggingFace Team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
import os
from pathlib import Path
import numpy as np
import pytest
from torch.utils.data import DataLoader
from pack_dataset import pack_data_dir
from parameterized import parameterized
from save_len_file import save_len_file
from transformers import AutoTokenizer
from transformers.models.mbart.modeling_mbart import shift_tokens_right
from transformers.testing_utils import TestCasePlus, slow
from utils import FAIRSEQ_AVAILABLE, DistributedSortishSampler, LegacySeq2SeqDataset, Seq2SeqDataset
BERT_BASE_CASED = "bert-base-cased"
PEGASUS_XSUM = "google/pegasus-xsum"
ARTICLES = [" Sam ate lunch today.", "Sams lunch ingredients."]
SUMMARIES = ["A very interesting story about what I ate for lunch.", "Avocado, celery, turkey, coffee"]
T5_TINY = "patrickvonplaten/t5-tiny-random"
BART_TINY = "sshleifer/bart-tiny-random"
MBART_TINY = "sshleifer/tiny-mbart"
MARIAN_TINY = "sshleifer/tiny-marian-en-de"
def _dump_articles(path: Path, articles: list):
content = "\n".join(articles)
Path(path).open("w").writelines(content)
def make_test_data_dir(tmp_dir):
for split in ["train", "val", "test"]:
_dump_articles(os.path.join(tmp_dir, f"{split}.source"), ARTICLES)
_dump_articles(os.path.join(tmp_dir, f"{split}.target"), SUMMARIES)
return tmp_dir
class TestAll(TestCasePlus):
@parameterized.expand(
[
MBART_TINY,
MARIAN_TINY,
T5_TINY,
BART_TINY,
PEGASUS_XSUM,
],
)
@slow
def test_seq2seq_dataset_truncation(self, tok_name):
tokenizer = AutoTokenizer.from_pretrained(tok_name)
tmp_dir = make_test_data_dir(tmp_dir=self.get_auto_remove_tmp_dir())
max_len_source = max(len(tokenizer.encode(a)) for a in ARTICLES)
max_len_target = max(len(tokenizer.encode(a)) for a in SUMMARIES)
max_src_len = 4
max_tgt_len = 8
assert max_len_target > max_src_len # Will be truncated
assert max_len_source > max_src_len # Will be truncated
src_lang, tgt_lang = "ro_RO", "de_DE" # ignored for all but mbart, but never causes error.
train_dataset = Seq2SeqDataset(
tokenizer,
data_dir=tmp_dir,
type_path="train",
max_source_length=max_src_len,
max_target_length=max_tgt_len, # ignored
src_lang=src_lang,
tgt_lang=tgt_lang,
)
dataloader = DataLoader(train_dataset, batch_size=2, collate_fn=train_dataset.collate_fn)
for batch in dataloader:
assert isinstance(batch, dict)
assert batch["attention_mask"].shape == batch["input_ids"].shape
# show that articles were trimmed.
assert batch["input_ids"].shape[1] == max_src_len
# show that targets are the same len
assert batch["labels"].shape[1] == max_tgt_len
if tok_name != MBART_TINY:
continue
# check language codes in correct place
batch["decoder_input_ids"] = shift_tokens_right(batch["labels"], tokenizer.pad_token_id)
assert batch["decoder_input_ids"][0, 0].item() == tokenizer.lang_code_to_id[tgt_lang]
assert batch["decoder_input_ids"][0, -1].item() == tokenizer.eos_token_id
assert batch["input_ids"][0, -2].item() == tokenizer.eos_token_id
assert batch["input_ids"][0, -1].item() == tokenizer.lang_code_to_id[src_lang]
break # No need to test every batch
@parameterized.expand([BART_TINY, BERT_BASE_CASED])
def test_legacy_dataset_truncation(self, tok):
tokenizer = AutoTokenizer.from_pretrained(tok)
tmp_dir = make_test_data_dir(tmp_dir=self.get_auto_remove_tmp_dir())
max_len_source = max(len(tokenizer.encode(a)) for a in ARTICLES)
max_len_target = max(len(tokenizer.encode(a)) for a in SUMMARIES)
trunc_target = 4
train_dataset = LegacySeq2SeqDataset(
tokenizer,
data_dir=tmp_dir,
type_path="train",
max_source_length=20,
max_target_length=trunc_target,
)
dataloader = DataLoader(train_dataset, batch_size=2, collate_fn=train_dataset.collate_fn)
for batch in dataloader:
assert batch["attention_mask"].shape == batch["input_ids"].shape
# show that articles were trimmed.
assert batch["input_ids"].shape[1] == max_len_source
assert 20 >= batch["input_ids"].shape[1] # trimmed significantly
# show that targets were truncated
assert batch["labels"].shape[1] == trunc_target # Truncated
assert max_len_target > trunc_target # Truncated
break # No need to test every batch
def test_pack_dataset(self):
tokenizer = AutoTokenizer.from_pretrained("facebook/mbart-large-cc25")
tmp_dir = Path(make_test_data_dir(tmp_dir=self.get_auto_remove_tmp_dir()))
orig_examples = tmp_dir.joinpath("train.source").open().readlines()
save_dir = Path(make_test_data_dir(tmp_dir=self.get_auto_remove_tmp_dir()))
pack_data_dir(tokenizer, tmp_dir, 128, save_dir)
orig_paths = {x.name for x in tmp_dir.iterdir()}
new_paths = {x.name for x in save_dir.iterdir()}
packed_examples = save_dir.joinpath("train.source").open().readlines()
# orig: [' Sam ate lunch today.\n', 'Sams lunch ingredients.']
# desired_packed: [' Sam ate lunch today.\n Sams lunch ingredients.']
assert len(packed_examples) < len(orig_examples)
assert len(packed_examples) == 1
assert len(packed_examples[0]) == sum(len(x) for x in orig_examples)
assert orig_paths == new_paths
@pytest.mark.skipif(not FAIRSEQ_AVAILABLE, reason="This test requires fairseq")
def test_dynamic_batch_size(self):
if not FAIRSEQ_AVAILABLE:
return
ds, max_tokens, tokenizer = self._get_dataset(max_len=64)
required_batch_size_multiple = 64
batch_sampler = ds.make_dynamic_sampler(max_tokens, required_batch_size_multiple=required_batch_size_multiple)
batch_sizes = [len(x) for x in batch_sampler]
assert len(set(batch_sizes)) > 1 # it's not dynamic batch size if every batch is the same length
assert sum(batch_sizes) == len(ds) # no dropped or added examples
data_loader = DataLoader(ds, batch_sampler=batch_sampler, collate_fn=ds.collate_fn, num_workers=2)
failures = []
num_src_per_batch = []
for batch in data_loader:
src_shape = batch["input_ids"].shape
bs = src_shape[0]
assert bs % required_batch_size_multiple == 0 or bs < required_batch_size_multiple
num_src_tokens = np.product(batch["input_ids"].shape)
num_src_per_batch.append(num_src_tokens)
if num_src_tokens > (max_tokens * 1.1):
failures.append(num_src_tokens)
assert num_src_per_batch[0] == max(num_src_per_batch)
if failures:
raise AssertionError(f"too many tokens in {len(failures)} batches")
def test_sortish_sampler_reduces_padding(self):
ds, _, tokenizer = self._get_dataset(max_len=512)
bs = 2
sortish_sampler = ds.make_sortish_sampler(bs, shuffle=False)
naive_dl = DataLoader(ds, batch_size=bs, collate_fn=ds.collate_fn, num_workers=2)
sortish_dl = DataLoader(ds, batch_size=bs, collate_fn=ds.collate_fn, num_workers=2, sampler=sortish_sampler)
pad = tokenizer.pad_token_id
def count_pad_tokens(data_loader, k="input_ids"):
return [batch[k].eq(pad).sum().item() for batch in data_loader]
assert sum(count_pad_tokens(sortish_dl, k="labels")) < sum(count_pad_tokens(naive_dl, k="labels"))
assert sum(count_pad_tokens(sortish_dl)) < sum(count_pad_tokens(naive_dl))
assert len(sortish_dl) == len(naive_dl)
def _get_dataset(self, n_obs=1000, max_len=128):
if os.getenv("USE_REAL_DATA", False):
data_dir = "examples/seq2seq/wmt_en_ro"
max_tokens = max_len * 2 * 64
if not Path(data_dir).joinpath("train.len").exists():
save_len_file(MARIAN_TINY, data_dir)
else:
data_dir = "examples/seq2seq/test_data/wmt_en_ro"
max_tokens = max_len * 4
save_len_file(MARIAN_TINY, data_dir)
tokenizer = AutoTokenizer.from_pretrained(MARIAN_TINY)
ds = Seq2SeqDataset(
tokenizer,
data_dir=data_dir,
type_path="train",
max_source_length=max_len,
max_target_length=max_len,
n_obs=n_obs,
)
return ds, max_tokens, tokenizer
def test_distributed_sortish_sampler_splits_indices_between_procs(self):
ds, max_tokens, tokenizer = self._get_dataset()
ids1 = set(DistributedSortishSampler(ds, 256, num_replicas=2, rank=0, add_extra_examples=False))
ids2 = set(DistributedSortishSampler(ds, 256, num_replicas=2, rank=1, add_extra_examples=False))
assert ids1.intersection(ids2) == set()
@parameterized.expand(
[
MBART_TINY,
MARIAN_TINY,
T5_TINY,
BART_TINY,
PEGASUS_XSUM,
],
)
def test_dataset_kwargs(self, tok_name):
tokenizer = AutoTokenizer.from_pretrained(tok_name, use_fast=False)
if tok_name == MBART_TINY:
train_dataset = Seq2SeqDataset(
tokenizer,
data_dir=make_test_data_dir(tmp_dir=self.get_auto_remove_tmp_dir()),
type_path="train",
max_source_length=4,
max_target_length=8,
src_lang="EN",
tgt_lang="FR",
)
kwargs = train_dataset.dataset_kwargs
assert "src_lang" in kwargs and "tgt_lang" in kwargs
else:
train_dataset = Seq2SeqDataset(
tokenizer,
data_dir=make_test_data_dir(tmp_dir=self.get_auto_remove_tmp_dir()),
type_path="train",
max_source_length=4,
max_target_length=8,
)
kwargs = train_dataset.dataset_kwargs
assert "add_prefix_space" not in kwargs if tok_name != BART_TINY else "add_prefix_space" in kwargs
assert len(kwargs) == 1 if tok_name == BART_TINY else len(kwargs) == 0
| 11,060 | 43.600806 | 118 | py |
robust-transformers | robust-transformers-main/examples/legacy/seq2seq/run_eval.py | #!/usr/bin/env python
# Copyright 2020 The HuggingFace Team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
import argparse
import datetime
import json
import time
import warnings
from logging import getLogger
from pathlib import Path
from typing import Dict, List
import torch
from tqdm import tqdm
from transformers import AutoModelForSeq2SeqLM, AutoTokenizer
from utils import calculate_bleu, calculate_rouge, chunks, parse_numeric_n_bool_cl_kwargs, use_task_specific_params
logger = getLogger(__name__)
DEFAULT_DEVICE = "cuda" if torch.cuda.is_available() else "cpu"
def generate_summaries_or_translations(
examples: List[str],
out_file: str,
model_name: str,
batch_size: int = 8,
device: str = DEFAULT_DEVICE,
fp16=False,
task="summarization",
prefix=None,
**generate_kwargs,
) -> Dict:
"""Save model.generate results to <out_file>, and return how long it took."""
fout = Path(out_file).open("w", encoding="utf-8")
model_name = str(model_name)
model = AutoModelForSeq2SeqLM.from_pretrained(model_name).to(device)
if fp16:
model = model.half()
tokenizer = AutoTokenizer.from_pretrained(model_name)
logger.info(f"Inferred tokenizer type: {tokenizer.__class__}") # if this is wrong, check config.model_type.
start_time = time.time()
# update config with task specific params
use_task_specific_params(model, task)
if prefix is None:
prefix = prefix or getattr(model.config, "prefix", "") or ""
for examples_chunk in tqdm(list(chunks(examples, batch_size))):
examples_chunk = [prefix + text for text in examples_chunk]
batch = tokenizer(examples_chunk, return_tensors="pt", truncation=True, padding="longest").to(device)
summaries = model.generate(
input_ids=batch.input_ids,
attention_mask=batch.attention_mask,
**generate_kwargs,
)
dec = tokenizer.batch_decode(summaries, skip_special_tokens=True, clean_up_tokenization_spaces=False)
for hypothesis in dec:
fout.write(hypothesis + "\n")
fout.flush()
fout.close()
runtime = int(time.time() - start_time) # seconds
n_obs = len(examples)
return dict(n_obs=n_obs, runtime=runtime, seconds_per_sample=round(runtime / n_obs, 4))
def datetime_now():
return datetime.datetime.now().strftime("%Y-%m-%d %H:%M:%S")
def run_generate(verbose=True):
"""
Takes input text, generates output, and then using reference calculates the BLEU scores.
The results are saved to a file and returned to the caller, and printed out unless ``verbose=False`` is passed.
Args:
verbose (:obj:`bool`, `optional`, defaults to :obj:`True`): print results to stdout
Returns:
a tuple: ``(scores, params}``
- ``scores``: a dict of scores data ``{'bleu': 39.6501, 'n_obs': 2000, 'runtime': 186, 'seconds_per_sample': 0.093}``
- ``params``: a dict of custom params, e.g. ``{'num_beams': 5, 'length_penalty': 0.8}``
"""
parser = argparse.ArgumentParser()
parser.add_argument("model_name", type=str, help="like facebook/bart-large-cnn,t5-base, etc.")
parser.add_argument("input_path", type=str, help="like cnn_dm/test.source")
parser.add_argument("save_path", type=str, help="where to save summaries")
parser.add_argument("--reference_path", type=str, required=False, help="like cnn_dm/test.target")
parser.add_argument("--score_path", type=str, required=False, default="metrics.json", help="where to save metrics")
parser.add_argument("--device", type=str, required=False, default=DEFAULT_DEVICE, help="cuda, cuda:1, cpu etc.")
parser.add_argument(
"--prefix", type=str, required=False, default=None, help="will be added to the begininng of src examples"
)
parser.add_argument("--task", type=str, default="summarization", help="used for task_specific_params + metrics")
parser.add_argument("--bs", type=int, default=8, required=False, help="batch size")
parser.add_argument(
"--n_obs", type=int, default=-1, required=False, help="How many observations. Defaults to all."
)
parser.add_argument("--fp16", action="store_true")
parser.add_argument("--dump-args", action="store_true", help="print the custom hparams with the results")
parser.add_argument(
"--info",
nargs="?",
type=str,
const=datetime_now(),
help="use in conjunction w/ --dump-args to print with the results whatever other info you'd like, e.g. lang=en-ru. If no value is passed, the current datetime string will be used.",
)
# Unspecified args like --num_beams=2 --decoder_start_token_id=4 are passed to model.generate
args, rest = parser.parse_known_args()
parsed_args = parse_numeric_n_bool_cl_kwargs(rest)
if parsed_args and verbose:
print(f"parsed the following generate kwargs: {parsed_args}")
examples = [" " + x.rstrip() if "t5" in args.model_name else x.rstrip() for x in open(args.input_path).readlines()]
if args.n_obs > 0:
examples = examples[: args.n_obs]
Path(args.save_path).parent.mkdir(exist_ok=True)
if args.reference_path is None and Path(args.score_path).exists():
warnings.warn(f"score_path {args.score_path} will be overwritten unless you type ctrl-c.")
if args.device == "cpu" and args.fp16:
# this mix leads to RuntimeError: "threshold_cpu" not implemented for 'Half'
raise ValueError("Can't mix --fp16 and --device cpu")
runtime_metrics = generate_summaries_or_translations(
examples,
args.save_path,
args.model_name,
batch_size=args.bs,
device=args.device,
fp16=args.fp16,
task=args.task,
prefix=args.prefix,
**parsed_args,
)
if args.reference_path is None:
return {}
# Compute scores
score_fn = calculate_bleu if "translation" in args.task else calculate_rouge
output_lns = [x.rstrip() for x in open(args.save_path).readlines()]
reference_lns = [x.rstrip() for x in open(args.reference_path).readlines()][: len(output_lns)]
scores: dict = score_fn(output_lns, reference_lns)
scores.update(runtime_metrics)
if args.dump_args:
scores.update(parsed_args)
if args.info:
scores["info"] = args.info
if verbose:
print(scores)
if args.score_path is not None:
json.dump(scores, open(args.score_path, "w"))
return scores
if __name__ == "__main__":
# Usage for MT:
# python run_eval.py MODEL_NAME $DATA_DIR/test.source $save_dir/test_translations.txt --reference_path $DATA_DIR/test.target --score_path $save_dir/test_bleu.json --task translation $@
run_generate(verbose=True)
| 7,285 | 38.814208 | 189 | py |
robust-transformers | robust-transformers-main/examples/legacy/seq2seq/xla_spawn.py | # Copyright 2020 The HuggingFace Team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
"""
A simple launcher script for TPU training
Inspired by https://github.com/pytorch/pytorch/blob/master/torch/distributed/launch.py
::
>>> python xla_spawn.py --num_cores=NUM_CORES_YOU_HAVE
YOUR_TRAINING_SCRIPT.py (--arg1 --arg2 --arg3 and all other
arguments of your training script)
"""
import importlib
import sys
from argparse import REMAINDER, ArgumentParser
from pathlib import Path
import torch_xla.distributed.xla_multiprocessing as xmp
def parse_args():
"""
Helper function parsing the command line options
@retval ArgumentParser
"""
parser = ArgumentParser(
description=(
"PyTorch TPU distributed training launch "
"helper utility that will spawn up "
"multiple distributed processes"
)
)
# Optional arguments for the launch helper
parser.add_argument("--num_cores", type=int, default=1, help="Number of TPU cores to use (1 or 8).")
# positional
parser.add_argument(
"training_script",
type=str,
help=(
"The full path to the single TPU training "
"program/script to be launched in parallel, "
"followed by all the arguments for the "
"training script"
),
)
# rest from the training program
parser.add_argument("training_script_args", nargs=REMAINDER)
return parser.parse_args()
def main():
args = parse_args()
# Import training_script as a module.
script_fpath = Path(args.training_script)
sys.path.append(str(script_fpath.parent.resolve()))
mod_name = script_fpath.stem
mod = importlib.import_module(mod_name)
# Patch sys.argv
sys.argv = [args.training_script] + args.training_script_args + ["--tpu_num_cores", str(args.num_cores)]
xmp.spawn(mod._mp_fn, args=(), nprocs=args.num_cores)
if __name__ == "__main__":
main()
| 2,519 | 28.302326 | 108 | py |
robust-transformers | robust-transformers-main/examples/legacy/seq2seq/old_test_fsmt_bleu_score.py | # coding=utf-8
# Copyright 2020 Huggingface
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
import io
import json
import unittest
from parameterized import parameterized
from transformers import FSMTForConditionalGeneration, FSMTTokenizer
from transformers.testing_utils import get_tests_dir, require_torch, slow, torch_device
from utils import calculate_bleu
filename = get_tests_dir() + "/test_data/fsmt/fsmt_val_data.json"
with io.open(filename, "r", encoding="utf-8") as f:
bleu_data = json.load(f)
@require_torch
class ModelEvalTester(unittest.TestCase):
def get_tokenizer(self, mname):
return FSMTTokenizer.from_pretrained(mname)
def get_model(self, mname):
model = FSMTForConditionalGeneration.from_pretrained(mname).to(torch_device)
if torch_device == "cuda":
model.half()
return model
@parameterized.expand(
[
["en-ru", 26.0],
["ru-en", 22.0],
["en-de", 22.0],
["de-en", 29.0],
]
)
@slow
def test_bleu_scores(self, pair, min_bleu_score):
# note: this test is not testing the best performance since it only evals a small batch
# but it should be enough to detect a regression in the output quality
mname = f"facebook/wmt19-{pair}"
tokenizer = self.get_tokenizer(mname)
model = self.get_model(mname)
src_sentences = bleu_data[pair]["src"]
tgt_sentences = bleu_data[pair]["tgt"]
batch = tokenizer(src_sentences, return_tensors="pt", truncation=True, padding="longest").to(torch_device)
outputs = model.generate(
input_ids=batch.input_ids,
num_beams=8,
)
decoded_sentences = tokenizer.batch_decode(
outputs, skip_special_tokens=True, clean_up_tokenization_spaces=False
)
scores = calculate_bleu(decoded_sentences, tgt_sentences)
print(scores)
self.assertGreaterEqual(scores["bleu"], min_bleu_score)
| 2,504 | 33.791667 | 114 | py |
robust-transformers | robust-transformers-main/examples/legacy/seq2seq/utils.py | # Copyright 2020 The HuggingFace Team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
import itertools
import json
import linecache
import math
import os
import pickle
import socket
from logging import getLogger
from pathlib import Path
from typing import Callable, Dict, Iterable, List, Tuple, Union
import git
import numpy as np
import torch
import torch.distributed as dist
from rouge_score import rouge_scorer, scoring
from sacrebleu import corpus_bleu
from torch import nn
from torch.utils.data import Dataset, Sampler
from sentence_splitter import add_newline_to_end_of_each_sentence
from transformers import BartTokenizer, EvalPrediction, PreTrainedTokenizer, T5Tokenizer
from transformers.file_utils import cached_property
from transformers.models.bart.modeling_bart import shift_tokens_right
try:
from fairseq.data.data_utils import batch_by_size
FAIRSEQ_AVAILABLE = True
except (ImportError, ModuleNotFoundError):
FAIRSEQ_AVAILABLE = False
def label_smoothed_nll_loss(lprobs, target, epsilon, ignore_index=-100):
"""From fairseq"""
if target.dim() == lprobs.dim() - 1:
target = target.unsqueeze(-1)
nll_loss = -lprobs.gather(dim=-1, index=target)
smooth_loss = -lprobs.sum(dim=-1, keepdim=True)
if ignore_index is not None:
pad_mask = target.eq(ignore_index)
nll_loss.masked_fill_(pad_mask, 0.0)
smooth_loss.masked_fill_(pad_mask, 0.0)
else:
nll_loss = nll_loss.squeeze(-1)
smooth_loss = smooth_loss.squeeze(-1)
nll_loss = nll_loss.sum() # mean()? Scared to break other math.
smooth_loss = smooth_loss.sum()
eps_i = epsilon / lprobs.size(-1)
loss = (1.0 - epsilon) * nll_loss + eps_i * smooth_loss
return loss, nll_loss
def lmap(f: Callable, x: Iterable) -> List:
"""list(map(f, x))"""
return list(map(f, x))
def calculate_bleu(output_lns, refs_lns, **kwargs) -> dict:
"""Uses sacrebleu's corpus_bleu implementation."""
return {"bleu": round(corpus_bleu(output_lns, [refs_lns], **kwargs).score, 4)}
def build_compute_metrics_fn(task_name: str, tokenizer: PreTrainedTokenizer) -> Callable[[EvalPrediction], Dict]:
def non_pad_len(tokens: np.ndarray) -> int:
return np.count_nonzero(tokens != tokenizer.pad_token_id)
def decode_pred(pred: EvalPrediction) -> Tuple[List[str], List[str]]:
pred_ids = pred.predictions
label_ids = pred.label_ids
pred_str = tokenizer.batch_decode(pred_ids, skip_special_tokens=True)
label_ids[label_ids == -100] = tokenizer.pad_token_id
label_str = tokenizer.batch_decode(label_ids, skip_special_tokens=True)
pred_str = lmap(str.strip, pred_str)
label_str = lmap(str.strip, label_str)
return pred_str, label_str
def summarization_metrics(pred: EvalPrediction) -> Dict:
pred_str, label_str = decode_pred(pred)
rouge: Dict = calculate_rouge(pred_str, label_str)
summ_len = np.round(np.mean(lmap(non_pad_len, pred.predictions)), 1)
rouge.update({"gen_len": summ_len})
return rouge
def translation_metrics(pred: EvalPrediction) -> Dict:
pred_str, label_str = decode_pred(pred)
bleu: Dict = calculate_bleu(pred_str, label_str)
gen_len = np.round(np.mean(lmap(non_pad_len, pred.predictions)), 1)
bleu.update({"gen_len": gen_len})
return bleu
compute_metrics_fn = summarization_metrics if "summarization" in task_name else translation_metrics
return compute_metrics_fn
def trim_batch(
input_ids,
pad_token_id,
attention_mask=None,
):
"""Remove columns that are populated exclusively by pad_token_id"""
keep_column_mask = input_ids.ne(pad_token_id).any(dim=0)
if attention_mask is None:
return input_ids[:, keep_column_mask]
else:
return (input_ids[:, keep_column_mask], attention_mask[:, keep_column_mask])
class AbstractSeq2SeqDataset(Dataset):
def __init__(
self,
tokenizer,
data_dir,
max_source_length,
max_target_length,
type_path="train",
n_obs=None,
prefix="",
**dataset_kwargs
):
super().__init__()
self.src_file = Path(data_dir).joinpath(type_path + ".source")
self.tgt_file = Path(data_dir).joinpath(type_path + ".target")
self.len_file = Path(data_dir).joinpath(type_path + ".len")
if os.path.exists(self.len_file):
self.src_lens = pickle_load(self.len_file)
self.used_char_len = False
else:
self.src_lens = self.get_char_lens(self.src_file)
self.used_char_len = True
self.max_source_length = max_source_length
self.max_target_length = max_target_length
assert min(self.src_lens) > 0, f"found empty line in {self.src_file}"
self.tokenizer = tokenizer
self.prefix = prefix if prefix is not None else ""
if n_obs is not None:
self.src_lens = self.src_lens[:n_obs]
self.pad_token_id = self.tokenizer.pad_token_id
self.dataset_kwargs = dataset_kwargs
dataset_kwargs.update({"add_prefix_space": True} if isinstance(self.tokenizer, BartTokenizer) else {})
def __len__(self):
return len(self.src_lens)
@staticmethod
def get_char_lens(data_file):
return [len(x) for x in Path(data_file).open().readlines()]
@cached_property
def tgt_lens(self):
"""Length in characters of target documents"""
return self.get_char_lens(self.tgt_file)
def make_sortish_sampler(self, batch_size, distributed=False, shuffle=True, **kwargs):
if distributed:
return DistributedSortishSampler(self, batch_size, shuffle=shuffle, **kwargs)
else:
return SortishSampler(self.src_lens, batch_size, shuffle=shuffle)
def make_dynamic_sampler(self, max_tokens_per_batch=1024, **kwargs):
assert FAIRSEQ_AVAILABLE, "Dynamic batch size requires `pip install fairseq`"
assert not self.used_char_len, "You must call python make_len_file.py before calling make_dynamic_sampler"
sorted_indices = list(self.make_sortish_sampler(1024, shuffle=False))
def num_tokens_in_example(i):
return min(self.src_lens[i], self.max_target_length)
# call fairseq cython function
batch_sampler: List[List[int]] = batch_by_size(
sorted_indices,
num_tokens_fn=num_tokens_in_example,
max_tokens=max_tokens_per_batch,
required_batch_size_multiple=64,
)
shuffled_batches = [batch_sampler[i] for i in np.random.permutation(range(len(batch_sampler)))]
# move the largest batch to the front to OOM quickly (uses an approximation for padding)
approximate_toks_per_batch = [max(self.src_lens[i] for i in batch) * len(batch) for batch in shuffled_batches]
largest_batch_idx = np.argmax(approximate_toks_per_batch)
shuffled_batches[0], shuffled_batches[largest_batch_idx] = (
shuffled_batches[largest_batch_idx],
shuffled_batches[0],
)
return shuffled_batches
def __getitem__(self, item):
raise NotImplementedError("You must implement this")
def collate_fn(self, batch):
raise NotImplementedError("You must implement this")
class LegacySeq2SeqDataset(AbstractSeq2SeqDataset):
def __getitem__(self, index) -> Dict[str, torch.Tensor]:
"""Call tokenizer on src and tgt_lines"""
index = index + 1 # linecache starts at 1
source_line = self.prefix + linecache.getline(str(self.src_file), index).rstrip("\n")
tgt_line = linecache.getline(str(self.tgt_file), index).rstrip("\n")
assert source_line, f"empty source line for index {index}"
assert tgt_line, f"empty tgt line for index {index}"
source_inputs = self.encode_line(self.tokenizer, source_line, self.max_source_length)
target_inputs = self.encode_line(self.tokenizer, tgt_line, self.max_target_length)
source_ids = source_inputs["input_ids"].squeeze()
target_ids = target_inputs["input_ids"].squeeze()
src_mask = source_inputs["attention_mask"].squeeze()
return {
"input_ids": source_ids,
"attention_mask": src_mask,
"labels": target_ids,
}
def encode_line(self, tokenizer, line, max_length, pad_to_max_length=True, return_tensors="pt"):
"""Only used by LegacyDataset"""
return tokenizer(
[line],
max_length=max_length,
padding="max_length" if pad_to_max_length else None,
truncation=True,
return_tensors=return_tensors,
**self.dataset_kwargs,
)
def collate_fn(self, batch) -> Dict[str, torch.Tensor]:
input_ids = torch.stack([x["input_ids"] for x in batch])
masks = torch.stack([x["attention_mask"] for x in batch])
target_ids = torch.stack([x["labels"] for x in batch])
pad_token_id = self.pad_token_id
y = trim_batch(target_ids, pad_token_id)
source_ids, source_mask = trim_batch(input_ids, pad_token_id, attention_mask=masks)
batch = {
"input_ids": source_ids,
"attention_mask": source_mask,
"labels": y,
}
return batch
class Seq2SeqDataset(AbstractSeq2SeqDataset):
"""A dataset that calls prepare_seq2seq_batch."""
def __getitem__(self, index) -> Dict[str, str]:
index = index + 1 # linecache starts at 1
source_line = self.prefix + linecache.getline(str(self.src_file), index).rstrip("\n")
tgt_line = linecache.getline(str(self.tgt_file), index).rstrip("\n")
assert source_line, f"empty source line for index {index}"
assert tgt_line, f"empty tgt line for index {index}"
return {"tgt_texts": tgt_line, "src_texts": source_line, "id": index - 1}
def collate_fn(self, batch) -> Dict[str, torch.Tensor]:
"""Call prepare_seq2seq_batch."""
batch_encoding: Dict[str, torch.Tensor] = self.tokenizer.prepare_seq2seq_batch(
[x["src_texts"] for x in batch],
tgt_texts=[x["tgt_texts"] for x in batch],
max_length=self.max_source_length,
max_target_length=self.max_target_length,
return_tensors="pt",
**self.dataset_kwargs,
).data
batch_encoding["ids"] = torch.tensor([x["id"] for x in batch])
return batch_encoding
class Seq2SeqDataCollator:
def __init__(self, tokenizer, data_args, decoder_start_token_id, tpu_num_cores=None):
self.tokenizer = tokenizer
self.pad_token_id = tokenizer.pad_token_id
self.decoder_start_token_id = decoder_start_token_id
assert (
self.pad_token_id is not None
), f"pad_token_id is not defined for ({self.tokenizer.__class__.__name__}), it must be defined."
self.data_args = data_args
self.tpu_num_cores = tpu_num_cores
self.dataset_kwargs = {"add_prefix_space": True} if isinstance(tokenizer, BartTokenizer) else {}
if data_args.src_lang is not None:
self.dataset_kwargs["src_lang"] = data_args.src_lang
if data_args.tgt_lang is not None:
self.dataset_kwargs["tgt_lang"] = data_args.tgt_lang
def __call__(self, batch) -> Dict[str, torch.Tensor]:
if hasattr(self.tokenizer, "prepare_seq2seq_batch"):
batch = self._encode(batch)
input_ids, attention_mask, labels = (
batch["input_ids"],
batch["attention_mask"],
batch["labels"],
)
else:
input_ids = torch.stack([x["input_ids"] for x in batch])
attention_mask = torch.stack([x["attention_mask"] for x in batch])
labels = torch.stack([x["labels"] for x in batch])
labels = trim_batch(labels, self.pad_token_id)
input_ids, attention_mask = trim_batch(input_ids, self.pad_token_id, attention_mask=attention_mask)
if isinstance(self.tokenizer, T5Tokenizer):
decoder_input_ids = self._shift_right_t5(labels)
else:
decoder_input_ids = shift_tokens_right(labels, self.pad_token_id, self.decoder_start_token_id)
batch = {
"input_ids": input_ids,
"attention_mask": attention_mask,
"decoder_input_ids": decoder_input_ids,
"labels": labels,
}
return batch
def _shift_right_t5(self, input_ids):
# shift inputs to the right
shifted_input_ids = input_ids.new_zeros(input_ids.shape)
shifted_input_ids[..., 1:] = input_ids[..., :-1].clone()
shifted_input_ids[..., 0] = self.pad_token_id
return shifted_input_ids
def _encode(self, batch) -> Dict[str, torch.Tensor]:
batch_encoding = self.tokenizer.prepare_seq2seq_batch(
[x["src_texts"] for x in batch],
tgt_texts=[x["tgt_texts"] for x in batch],
max_length=self.data_args.max_source_length,
max_target_length=self.data_args.max_target_length,
padding="max_length" if self.tpu_num_cores is not None else "longest", # TPU hack
return_tensors="pt",
**self.dataset_kwargs,
)
return batch_encoding.data
class SortishSampler(Sampler):
"Go through the text data by order of src length with a bit of randomness. From fastai repo."
def __init__(self, data, batch_size, shuffle=True):
self.data, self.bs, self.shuffle = data, batch_size, shuffle
def __len__(self) -> int:
return len(self.data)
def __iter__(self):
return iter(sortish_sampler_indices(self.data, self.bs, shuffle=self.shuffle))
def sortish_sampler_indices(data: List, bs: int, shuffle=True) -> np.array:
"Go through the text data by order of src length with a bit of randomness. From fastai repo."
if not shuffle:
return np.argsort(np.array(data) * -1)
def key_fn(i):
return data[i]
idxs = np.random.permutation(len(data))
sz = bs * 50
ck_idx = [idxs[i : i + sz] for i in range(0, len(idxs), sz)]
sort_idx = np.concatenate([sorted(s, key=key_fn, reverse=True) for s in ck_idx])
sz = bs
ck_idx = [sort_idx[i : i + sz] for i in range(0, len(sort_idx), sz)]
max_ck = np.argmax([key_fn(ck[0]) for ck in ck_idx]) # find the chunk with the largest key,
ck_idx[0], ck_idx[max_ck] = ck_idx[max_ck], ck_idx[0] # then make sure it goes first.
sort_idx = np.concatenate(np.random.permutation(ck_idx[1:])) if len(ck_idx) > 1 else np.array([], dtype=np.int)
sort_idx = np.concatenate((ck_idx[0], sort_idx))
return sort_idx
class DistributedSortishSampler(Sampler):
"""Copied from torch DistributedSampler"""
def __init__(self, dataset, batch_size, num_replicas=None, rank=None, add_extra_examples=True, shuffle=True):
if num_replicas is None:
if not dist.is_available():
raise RuntimeError("Requires distributed package to be available")
num_replicas = dist.get_world_size()
if rank is None:
if not dist.is_available():
raise RuntimeError("Requires distributed package to be available")
rank = dist.get_rank()
self.dataset = dataset
self.num_replicas = num_replicas
self.rank = rank
self.epoch = 0
if add_extra_examples:
self.num_samples = int(math.ceil(len(self.dataset) * 1.0 / self.num_replicas))
self.total_size = self.num_samples * self.num_replicas
else:
self.total_size = len(dataset)
self.num_samples = len(self.available_indices)
self.batch_size = batch_size
self.add_extra_examples = add_extra_examples
self.shuffle = shuffle
def __iter__(self) -> Iterable:
g = torch.Generator()
g.manual_seed(self.epoch)
sortish_data = [self.dataset.src_lens[i] for i in self.available_indices]
sortish_indices = sortish_sampler_indices(sortish_data, self.batch_size, shuffle=self.shuffle)
indices = [self.available_indices[i] for i in sortish_indices]
assert len(indices) == self.num_samples
return iter(indices)
@cached_property
def available_indices(self) -> np.array:
indices = list(range(len(self.dataset)))
# add extra samples to make it evenly divisible
indices += indices[: (self.total_size - len(indices))]
assert len(indices) == self.total_size
# subsample
available_indices = indices[self.rank : self.total_size : self.num_replicas]
return available_indices
def __len__(self):
return self.num_samples
def set_epoch(self, epoch):
self.epoch = epoch
logger = getLogger(__name__)
def use_task_specific_params(model, task):
"""Update config with summarization specific params."""
task_specific_params = model.config.task_specific_params
if task_specific_params is not None:
pars = task_specific_params.get(task, {})
logger.info(f"setting model.config to task specific params for {task}:\n {pars}")
logger.info("note: command line args may override some of these")
model.config.update(pars)
def pickle_load(path):
"""pickle.load(path)"""
with open(path, "rb") as f:
return pickle.load(f)
def pickle_save(obj, path):
"""pickle.dump(obj, path)"""
with open(path, "wb") as f:
return pickle.dump(obj, f)
def flatten_list(summary_ids: List[List]):
return [x for x in itertools.chain.from_iterable(summary_ids)]
def save_git_info(folder_path: str) -> None:
"""Save git information to output_dir/git_log.json"""
repo_infos = get_git_info()
save_json(repo_infos, os.path.join(folder_path, "git_log.json"))
def save_json(content, path, indent=4, **json_dump_kwargs):
with open(path, "w") as f:
json.dump(content, f, indent=indent, sort_keys=True, **json_dump_kwargs)
def load_json(path):
with open(path) as f:
return json.load(f)
def get_git_info():
try:
repo = git.Repo(search_parent_directories=True)
repo_infos = {
"repo_id": str(repo),
"repo_sha": str(repo.head.object.hexsha),
"repo_branch": str(repo.active_branch),
"hostname": str(socket.gethostname()),
}
return repo_infos
except TypeError:
return {
"repo_id": None,
"repo_sha": None,
"repo_branch": None,
"hostname": None,
}
ROUGE_KEYS = ["rouge1", "rouge2", "rougeL", "rougeLsum"]
def extract_rouge_mid_statistics(dct):
new_dict = {}
for k1, v1 in dct.items():
mid = v1.mid
new_dict[k1] = {stat: round(getattr(mid, stat), 4) for stat in ["precision", "recall", "fmeasure"]}
return new_dict
def calculate_rouge(
pred_lns: List[str],
tgt_lns: List[str],
use_stemmer=True,
rouge_keys=ROUGE_KEYS,
return_precision_and_recall=False,
bootstrap_aggregation=True,
newline_sep=True,
) -> Dict:
"""Calculate rouge using rouge_scorer package.
Args:
pred_lns: list of summaries generated by model
tgt_lns: list of groundtruth summaries (e.g. contents of val.target)
use_stemmer: Bool indicating whether Porter stemmer should be used to
strip word suffixes to improve matching.
rouge_keys: which metrics to compute, defaults to rouge1, rouge2, rougeL, rougeLsum
return_precision_and_recall: (False) whether to also return precision and recall.
bootstrap_aggregation: whether to do the typical bootstrap resampling of scores. Defaults to True, if False
this function returns a collections.defaultdict[metric: list of values for each observation for each subscore]``
newline_sep:(default=True) whether to add newline between sentences. This is essential for calculation rougeL
on multi sentence summaries (CNN/DM dataset).
Returns:
Dict[score: value] if aggregate else defaultdict(list) keyed by rouge_keys
"""
scorer = rouge_scorer.RougeScorer(rouge_keys, use_stemmer=use_stemmer)
aggregator = scoring.BootstrapAggregator()
for pred, tgt in zip(tgt_lns, pred_lns):
# rougeLsum expects "\n" separated sentences within a summary
if newline_sep:
pred = add_newline_to_end_of_each_sentence(pred)
tgt = add_newline_to_end_of_each_sentence(tgt)
scores = scorer.score(pred, tgt)
aggregator.add_scores(scores)
if bootstrap_aggregation:
result = aggregator.aggregate()
if return_precision_and_recall:
return extract_rouge_mid_statistics(result) # here we return dict
else:
return {k: round(v.mid.fmeasure * 100, 4) for k, v in result.items()}
else:
return aggregator._scores # here we return defaultdict(list)
# Utilities for freezing parameters and checking whether they are frozen
def freeze_params(model: nn.Module):
"""Set requires_grad=False for each of model.parameters()"""
for par in model.parameters():
par.requires_grad = False
def freeze_embeds(model):
"""Freeze token embeddings and positional embeddings for bart, just token embeddings for t5."""
model_type = model.config.model_type
if model_type in ["t5", "mt5"]:
freeze_params(model.shared)
for d in [model.encoder, model.decoder]:
freeze_params(d.embed_tokens)
elif model_type == "fsmt":
for d in [model.model.encoder, model.model.decoder]:
freeze_params(d.embed_positions)
freeze_params(d.embed_tokens)
else:
freeze_params(model.model.shared)
for d in [model.model.encoder, model.model.decoder]:
freeze_params(d.embed_positions)
freeze_params(d.embed_tokens)
def grad_status(model: nn.Module) -> Iterable:
return (par.requires_grad for par in model.parameters())
def any_requires_grad(model: nn.Module) -> bool:
return any(grad_status(model))
def assert_all_frozen(model):
model_grads: List[bool] = list(grad_status(model))
n_require_grad = sum(lmap(int, model_grads))
npars = len(model_grads)
assert not any(model_grads), f"{n_require_grad/npars:.1%} of {npars} weights require grad"
def assert_not_all_frozen(model):
model_grads: List[bool] = list(grad_status(model))
npars = len(model_grads)
assert any(model_grads), f"none of {npars} weights require grad"
def parse_numeric_n_bool_cl_kwargs(unparsed_args: List[str]) -> Dict[str, Union[int, float, bool]]:
"""
Parse an argv list of unspecified command line args to a dict.
Assumes all values are either numeric or boolean in the form of true/false.
"""
result = {}
assert len(unparsed_args) % 2 == 0, f"got odd number of unparsed args: {unparsed_args}"
num_pairs = len(unparsed_args) // 2
for pair_num in range(num_pairs):
i = 2 * pair_num
assert unparsed_args[i].startswith("--")
if unparsed_args[i + 1].lower() == "true":
value = True
elif unparsed_args[i + 1].lower() == "false":
value = False
else:
try:
value = int(unparsed_args[i + 1])
except ValueError:
value = float(unparsed_args[i + 1]) # this can raise another informative ValueError
result[unparsed_args[i][2:]] = value
return result
def write_txt_file(ordered_tgt, path):
f = Path(path).open("w")
for ln in ordered_tgt:
f.write(ln + "\n")
f.flush()
def chunks(lst, n):
"""Yield successive n-sized chunks from lst."""
for i in range(0, len(lst), n):
yield lst[i : i + n]
def check_output_dir(args, expected_items=0):
"""
Checks whether to bail out if output_dir already exists and has more than expected_items in it
`args`: needs to have the following attributes of `args`:
- output_dir
- do_train
- overwrite_output_dir
`expected_items`: normally 0 (default) - i.e. empty dir, but in some cases a few files are expected (e.g. recovery from OOM)
"""
if (
os.path.exists(args.output_dir)
and len(os.listdir(args.output_dir)) > expected_items
and args.do_train
and not args.overwrite_output_dir
):
raise ValueError(
f"Output directory ({args.output_dir}) already exists and "
f"has {len(os.listdir(args.output_dir))} items in it (expected {expected_items} items). "
"Use --overwrite_output_dir to overcome."
)
| 25,293 | 37.03609 | 128 | py |
robust-transformers | robust-transformers-main/examples/legacy/seq2seq/old_test_tatoeba_conversion.py | # Copyright 2020 The HuggingFace Team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
import os
import tempfile
import unittest
from transformers.file_utils import cached_property
from transformers.models.marian.convert_marian_tatoeba_to_pytorch import DEFAULT_REPO, TatoebaConverter
from transformers.testing_utils import slow
@unittest.skipUnless(os.path.exists(DEFAULT_REPO), "Tatoeba directory does not exist.")
class TatoebaConversionTester(unittest.TestCase):
@cached_property
def resolver(self):
tmp_dir = tempfile.mkdtemp()
return TatoebaConverter(save_dir=tmp_dir)
@slow
def test_resolver(self):
self.resolver.convert_models(["heb-eng"])
@slow
def test_model_card(self):
content, mmeta = self.resolver.write_model_card("opus-mt-he-en", dry_run=True)
assert mmeta["long_pair"] == "heb-eng"
| 1,388 | 34.615385 | 103 | py |
robust-transformers | robust-transformers-main/examples/legacy/seq2seq/seq2seq_trainer.py | # Copyright 2020 The HuggingFace Team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
from typing import Any, Dict, List, Optional, Tuple, Union
import torch
from torch import nn
from torch.utils.data import DistributedSampler, RandomSampler
from transformers import PreTrainedModel, Trainer, logging
from transformers.file_utils import is_torch_tpu_available
from transformers.integrations import is_fairscale_available
from transformers.models.fsmt.configuration_fsmt import FSMTConfig
from transformers.optimization import (
Adafactor,
AdamW,
get_constant_schedule,
get_constant_schedule_with_warmup,
get_cosine_schedule_with_warmup,
get_cosine_with_hard_restarts_schedule_with_warmup,
get_linear_schedule_with_warmup,
get_polynomial_decay_schedule_with_warmup,
)
from transformers.trainer_pt_utils import get_tpu_sampler
from transformers.training_args import ParallelMode
if is_fairscale_available():
from fairscale.optim import OSS
logger = logging.get_logger(__name__)
arg_to_scheduler = {
"linear": get_linear_schedule_with_warmup,
"cosine": get_cosine_schedule_with_warmup,
"cosine_w_restarts": get_cosine_with_hard_restarts_schedule_with_warmup,
"polynomial": get_polynomial_decay_schedule_with_warmup,
"constant": get_constant_schedule,
"constant_w_warmup": get_constant_schedule_with_warmup,
}
class Seq2SeqTrainer(Trainer):
def __init__(self, config=None, data_args=None, *args, **kwargs):
super().__init__(*args, **kwargs)
if config is None:
assert isinstance(
self.model, PreTrainedModel
), f"If no `config` is passed the model to be trained has to be of type `PreTrainedModel`, but is {self.model.__class__}"
self.config = self.model.config
else:
self.config = config
self.data_args = data_args
self.vocab_size = self.config.tgt_vocab_size if isinstance(self.config, FSMTConfig) else self.config.vocab_size
if self.args.label_smoothing != 0 or (self.data_args is not None and self.data_args.ignore_pad_token_for_loss):
assert (
self.config.pad_token_id is not None
), "Make sure that `config.pad_token_id` is correcly defined when ignoring `pad_token` for loss calculation or doing label smoothing."
if self.config.pad_token_id is None and self.config.eos_token_id is not None:
logger.warning(
f"The `config.pad_token_id` is `None`. Using `config.eos_token_id` = {self.config.eos_token_id} for padding.."
)
if self.args.label_smoothing == 0:
self.loss_fn = torch.nn.CrossEntropyLoss(ignore_index=self.config.pad_token_id)
else:
# dynamically import label_smoothed_nll_loss
from utils import label_smoothed_nll_loss
self.loss_fn = label_smoothed_nll_loss
def create_optimizer_and_scheduler(self, num_training_steps: int):
"""
Setup the optimizer and the learning rate scheduler.
We provide a reasonable default that works well. If you want to use something else, you can pass a tuple in the
Trainer's init through :obj:`optimizers`, or subclass and override this method in a subclass.
"""
if self.optimizer is None:
no_decay = ["bias", "LayerNorm.weight"]
optimizer_grouped_parameters = [
{
"params": [p for n, p in self.model.named_parameters() if not any(nd in n for nd in no_decay)],
"weight_decay": self.args.weight_decay,
},
{
"params": [p for n, p in self.model.named_parameters() if any(nd in n for nd in no_decay)],
"weight_decay": 0.0,
},
]
optimizer_cls = Adafactor if self.args.adafactor else AdamW
if self.args.adafactor:
optimizer_cls = Adafactor
optimizer_kwargs = {"scale_parameter": False, "relative_step": False}
else:
optimizer_cls = AdamW
optimizer_kwargs = {
"betas": (self.args.adam_beta1, self.args.adam_beta2),
"eps": self.args.adam_epsilon,
}
optimizer_kwargs["lr"] = self.args.learning_rate
if self.sharded_dpp:
self.optimizer = OSS(
params=optimizer_grouped_parameters,
optim=optimizer_cls,
**optimizer_kwargs,
)
else:
self.optimizer = optimizer_cls(optimizer_grouped_parameters, **optimizer_kwargs)
if self.lr_scheduler is None:
self.lr_scheduler = self._get_lr_scheduler(num_training_steps)
else: # ignoring --lr_scheduler
logger.warning("scheduler is passed to `Seq2SeqTrainer`, `--lr_scheduler` arg is ignored.")
def _get_lr_scheduler(self, num_training_steps):
schedule_func = arg_to_scheduler[self.args.lr_scheduler]
if self.args.lr_scheduler == "constant":
scheduler = schedule_func(self.optimizer)
elif self.args.lr_scheduler == "constant_w_warmup":
scheduler = schedule_func(self.optimizer, num_warmup_steps=self.args.warmup_steps)
else:
scheduler = schedule_func(
self.optimizer, num_warmup_steps=self.args.warmup_steps, num_training_steps=num_training_steps
)
return scheduler
def _get_train_sampler(self) -> Optional[torch.utils.data.Sampler]:
if isinstance(self.train_dataset, torch.utils.data.IterableDataset):
return None
elif is_torch_tpu_available():
return get_tpu_sampler(self.train_dataset)
else:
if self.args.sortish_sampler:
self.train_dataset.make_sortish_sampler(
self.args.per_device_train_batch_size,
distributed=(self.args.parallel_mode == ParallelMode.DISTRIBUTED),
)
return (
RandomSampler(self.train_dataset)
if self.args.local_rank == -1
else DistributedSampler(self.train_dataset)
)
def _compute_loss(self, model, inputs, labels):
if self.args.label_smoothing == 0:
if self.data_args is not None and self.data_args.ignore_pad_token_for_loss:
# force training to ignore pad token
logits = model(**inputs, use_cache=False)[0]
loss = self.loss_fn(logits.view(-1, logits.shape[-1]), labels.view(-1))
else:
# compute usual loss via models
loss, logits = model(**inputs, labels=labels, use_cache=False)[:2]
else:
# compute label smoothed loss
logits = model(**inputs, use_cache=False)[0]
lprobs = torch.nn.functional.log_softmax(logits, dim=-1)
loss, _ = self.loss_fn(lprobs, labels, self.args.label_smoothing, ignore_index=self.config.pad_token_id)
return loss, logits
def compute_loss(self, model, inputs):
labels = inputs.pop("labels")
loss, _ = self._compute_loss(model, inputs, labels)
return loss
def prediction_step(
self,
model: nn.Module,
inputs: Dict[str, Union[torch.Tensor, Any]],
prediction_loss_only: bool,
ignore_keys: Optional[List[str]] = None,
) -> Tuple[Optional[float], Optional[torch.Tensor], Optional[torch.Tensor]]:
"""
Perform an evaluation step on :obj:`model` using obj:`inputs`.
Subclass and override to inject custom behavior.
Args:
model (:obj:`nn.Module`):
The model to evaluate.
inputs (:obj:`Dict[str, Union[torch.Tensor, Any]]`):
The inputs and targets of the model.
The dictionary will be unpacked before being fed to the model. Most models expect the targets under the
argument :obj:`labels`. Check your model's documentation for all accepted arguments.
prediction_loss_only (:obj:`bool`):
Whether or not to return the loss only.
Return:
Tuple[Optional[float], Optional[torch.Tensor], Optional[torch.Tensor]]:
A tuple with the loss, logits and labels (each being optional).
"""
inputs = self._prepare_inputs(inputs)
gen_kwargs = {
"max_length": self.data_args.val_max_target_length
if self.data_args is not None
else self.config.max_length,
"num_beams": self.data_args.eval_beams if self.data_args is not None else self.config.num_beams,
}
if self.args.predict_with_generate and not self.args.prediction_loss_only:
generated_tokens = self.model.generate(
inputs["input_ids"],
attention_mask=inputs["attention_mask"],
**gen_kwargs,
)
# in case the batch is shorter than max length, the output should be padded
if generated_tokens.shape[-1] < gen_kwargs["max_length"]:
generated_tokens = self._pad_tensors_to_max_len(generated_tokens, gen_kwargs["max_length"])
labels = inputs.pop("labels")
with torch.no_grad():
# compute loss on predict data
loss, logits = self._compute_loss(model, inputs, labels)
loss = loss.mean().detach()
if self.args.prediction_loss_only:
return (loss, None, None)
logits = generated_tokens if self.args.predict_with_generate else logits
if labels.shape[-1] < gen_kwargs["max_length"]:
labels = self._pad_tensors_to_max_len(labels, gen_kwargs["max_length"])
return (loss, logits, labels)
def _pad_tensors_to_max_len(self, tensor, max_length):
# If PAD token is not defined at least EOS token has to be defined
pad_token_id = self.config.pad_token_id if self.config.pad_token_id is not None else self.config.eos_token_id
if pad_token_id is None:
raise ValueError(
f"Make sure that either `config.pad_token_id` or `config.eos_token_id` is defined if tensor has to be padded to `max_length`={max_length}"
)
padded_tensor = pad_token_id * torch.ones(
(tensor.shape[0], max_length), dtype=tensor.dtype, device=tensor.device
)
padded_tensor[:, : tensor.shape[-1]] = tensor
return padded_tensor
| 11,141 | 42.019305 | 154 | py |
robust-transformers | robust-transformers-main/examples/legacy/seq2seq/convert_model_to_fp16.py | #!/usr/bin/env python
# Copyright 2020 The HuggingFace Team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
from typing import Union
import fire
import torch
from tqdm import tqdm
def convert(src_path: str, map_location: str = "cpu", save_path: Union[str, None] = None) -> None:
"""Convert a pytorch_model.bin or model.pt file to torch.float16 for faster downloads, less disk space."""
state_dict = torch.load(src_path, map_location=map_location)
for k, v in tqdm(state_dict.items()):
if not isinstance(v, torch.Tensor):
raise TypeError("FP16 conversion only works on paths that are saved state dicts, like pytorch_model.bin")
state_dict[k] = v.half()
if save_path is None: # overwrite src_path
save_path = src_path
torch.save(state_dict, save_path)
if __name__ == "__main__":
fire.Fire(convert)
| 1,383 | 36.405405 | 117 | py |
robust-transformers | robust-transformers-main/examples/legacy/seq2seq/save_len_file.py | #!/usr/bin/env python
# Copyright 2020 The HuggingFace Team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
import fire
from torch.utils.data import DataLoader
from tqdm import tqdm
from transformers import AutoTokenizer
from utils import Seq2SeqDataset, pickle_save
def save_len_file(
tokenizer_name, data_dir, max_source_length=1024, max_target_length=1024, consider_target=False, **kwargs
):
"""Save max(src_len, tgt_len) for each example to allow dynamic batching."""
tok = AutoTokenizer.from_pretrained(tokenizer_name)
train_ds = Seq2SeqDataset(tok, data_dir, max_source_length, max_target_length, type_path="train", **kwargs)
pad = tok.pad_token_id
def get_lens(ds):
dl = tqdm(
DataLoader(ds, batch_size=512, num_workers=8, shuffle=False, collate_fn=ds.collate_fn),
desc=str(ds.len_file),
)
max_lens = []
for batch in dl:
src_lens = batch["input_ids"].ne(pad).sum(1).tolist()
tgt_lens = batch["labels"].ne(pad).sum(1).tolist()
if consider_target:
for src, tgt in zip(src_lens, tgt_lens):
max_lens.append(max(src, tgt))
else:
max_lens.extend(src_lens)
return max_lens
train_lens = get_lens(train_ds)
val_ds = Seq2SeqDataset(tok, data_dir, max_source_length, max_target_length, type_path="val", **kwargs)
val_lens = get_lens(val_ds)
pickle_save(train_lens, train_ds.len_file)
pickle_save(val_lens, val_ds.len_file)
if __name__ == "__main__":
fire.Fire(save_len_file)
| 2,111 | 36.052632 | 111 | py |
robust-transformers | robust-transformers-main/examples/legacy/seq2seq/old_test_seq2seq_examples_multi_gpu.py | # Copyright 2020 The HuggingFace Team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
# as due to their complexity multi-gpu tests could impact other tests, and to aid debug we have those in a separate module.
import os
import sys
from transformers.testing_utils import TestCasePlus, execute_subprocess_async, get_gpu_count, require_torch_gpu, slow
from .utils import load_json
class TestSummarizationDistillerMultiGPU(TestCasePlus):
@classmethod
def setUpClass(cls):
return cls
@slow
@require_torch_gpu
def test_distributed_eval(self):
output_dir = self.get_auto_remove_tmp_dir()
args = f"""
--model_name Helsinki-NLP/opus-mt-en-ro
--save_dir {output_dir}
--data_dir {self.test_file_dir_str}/test_data/wmt_en_ro
--num_beams 2
--task translation
""".split()
# we want this test to run even if there is only one GPU, but if there are more we use them all
n_gpu = get_gpu_count()
distributed_args = f"""
-m torch.distributed.launch
--nproc_per_node={n_gpu}
{self.test_file_dir}/run_distributed_eval.py
""".split()
cmd = [sys.executable] + distributed_args + args
execute_subprocess_async(cmd, env=self.get_env())
metrics_save_path = os.path.join(output_dir, "test_bleu.json")
metrics = load_json(metrics_save_path)
# print(metrics)
self.assertGreaterEqual(metrics["bleu"], 25)
| 2,032 | 35.303571 | 123 | py |
robust-transformers | robust-transformers-main/src/transformers/gcdro_loss_ga.py | import os
import torch
import torch.nn as nn
import torch.nn.functional as F
import numpy as np
from dataclasses import dataclass, field
from collections.abc import Mapping
from typing import TYPE_CHECKING, Any, Callable, Dict, List, Optional, Tuple, Union
class GCDROLossComputerWithGA:
def __init__(self, dro_args, training_args, n_groups, group_counts, adj=None):
self.is_robust = dro_args.is_robust
self.gamma = dro_args.gamma # ema for group loss
self.alpha = dro_args.alpha # alpha-cover factor
self.min_var_weight = dro_args.min_var_weight
self.step_size = dro_args.step_size
self.normalize_loss = dro_args.normalize_loss
self.btl = dro_args.btl
self.training_args = training_args
self.beta = dro_args.beta
self.beta_ema = dro_args.beta_ema
self.do_instance_reweight = dro_args.do_instance_reweight
## Can we pass these arguments, after computing upon reading the data, and then passing it through training args to Trainer.
self.n_groups = n_groups
self.group_counts = self._prepare_input(group_counts)
self.count_cat = self._prepare_input(torch.ones(self.n_groups).float())
#self.group_frac = self.group_counts/self.group_counts.sum()
#self.group_str = group_str
if adj is not None:
self.adj = self._prepare_input(torch.from_numpy(adj).float())
else:
self.adj = self._prepare_input(torch.zeros(self.n_groups).float())
if dro_args.is_robust:
assert dro_args.alpha, 'alpha must be specified'
# quantities maintained throughout training
self.adv_probs = self._prepare_input(torch.ones(self.n_groups)) #/self.n_groups
self.exp_avg_loss = self._prepare_input(torch.zeros(self.n_groups))
self.group_loss = self._prepare_input(torch.zeros(self.n_groups))
self.exp_avg_initialized = self._prepare_input(torch.zeros(self.n_groups).byte())
# quantities maintained throughout training for instance level G-DRO
self.accum_losses = None
self.reset_stats()
def _prepare_input(self, data: Union[torch.Tensor, Any]) -> Union[torch.Tensor, Any]:
"""
Prepares one `data` before feeding it to the model, be it a tensor or a nested list/dictionary of tensors.
"""
if isinstance(data, Mapping):
return type(data)({k: self._prepare_input(v) for k, v in data.items()})
elif isinstance(data, (tuple, list)):
return type(data)(self._prepare_input(v) for v in data)
elif isinstance(data, torch.Tensor):
kwargs = dict(device=self.training_args.device)
if self.training_args.deepspeed and data.dtype != torch.int64:
# NLP models inputs are int64 and those get adjusted to the right dtype of the
# embedding. Other models such as wav2vec2's inputs are already float and thus
# may need special handling to match the dtypes of the model
kwargs.update(dict(dtype=self.training_args.hf_deepspeed_config.dtype()))
return data.to(**kwargs)
return data
def loss(self, per_sample_losses, yhat, y, group_idx=None, group_distribution=None, instance_weights=None, batch_group_loss=None, group_counts=None, update_avg=None, is_training=False):
# compute per-sample and per-group losses
# per_sample_losses = self.criterion(yhat, y) #TODO: Change, per_sample_loss is already computed.
"""
GC-DRO loss specifics
if "weights" in sample:
ind_loss = ind_loss * sample["weights"]
"""
if instance_weights is not None and self.do_instance_reweight:
per_sample_losses = instance_weights*per_sample_losses
minibatch_group_loss, minibatch_group_count = self.compute_group_avg(per_sample_losses, group_idx)
minibatch_group_acc, minibatch_group_count = self.compute_group_avg((torch.argmax(yhat,1)==y).float(), group_idx)
group_loss = self.compute_group_loss(per_sample_losses, group_idx)
# normalize group_loss by total group counts.
globally_normalized_group_loss = group_loss/(group_counts + (group_counts==0).float())
# TODO: Update historical losses after computing robust loss
if update_avg:
batch_group_loss += globally_normalized_group_loss
self.update_exp_avg_loss(batch_group_loss, group_counts)
# compute overall loss
actual_loss, weights = self.compute_robust_loss_btl(globally_normalized_group_loss, group_counts)
# TODO: update stats still uses minibatch statistics.
self.update_stats(actual_loss, minibatch_group_loss, minibatch_group_acc, minibatch_group_count, weights)
return actual_loss, globally_normalized_group_loss
def compute_robust_loss_btl(self, group_loss, group_count):
adjusted_loss = self.exp_avg_loss + self.adj/torch.sqrt(self.group_counts)
return self.compute_robust_loss_greedy(group_loss, adjusted_loss)
def compute_robust_loss_greedy(self, group_loss, ref_loss):
#TODO: ref_loss if all zeros, resort to using unform weights
sorted_idx = ref_loss.sort(descending=True)[1]
#sorted_loss = group_loss[sorted_idx]
past_frac = self.count_cat / self.count_cat.sum()
sorted_frac = past_frac[sorted_idx]
"""
mask = torch.cumsum(sorted_frac, dim=0)<=self.alpha
self.adv_probs = mask.float() * sorted_frac /self.alpha
last_idx = mask.sum()
self.adv_probs[last_idx] = 1 - self.adv_probs.sum()
self.adv_probs = sorted_frac*self.min_var_weight + self.adv_probs*(1-self.min_var_weight)
"""
## Chunting's code verison of greedy alpha-cover upweighting.
cutoff_count = torch.sum(torch.cumsum(sorted_frac, 0) < self.alpha)
if cutoff_count == len(sorted_frac):
cutoff_count = len(sorted_frac) - 1
self.adv_probs= self.adv_probs.new_full(self.adv_probs.size(), self.min_var_weight)
self.adv_probs[sorted_idx[:cutoff_count]] = 1.0 / self.alpha
leftover_mass = 1.0 - sorted_frac[:cutoff_count].sum().div(self.alpha)
tiebreak_fraction = leftover_mass / sorted_frac[cutoff_count] # check!
self.adv_probs[sorted_idx[cutoff_count]] = tiebreak_fraction
robust_loss = group_loss @ self.adv_probs
# sort the weights back
# _, unsort_idx = sorted_idx.sort()
# unsorted_weights = weights[unsort_idx]
# update class objects for logging in trainer_dro
self.group_loss = group_loss
#self.adv_probs = weights
return robust_loss, self.adv_probs
def compute_group_loss(self, losses, group_idx):
group_map = (group_idx == self._prepare_input(torch.arange(self.n_groups).unsqueeze(1).long())).float()
group_loss = (group_map @ losses.view(-1))
return group_loss
def compute_group_avg(self, losses, group_idx):
# compute observed counts and mean loss for each group
group_map = (group_idx == self._prepare_input(torch.arange(self.n_groups).unsqueeze(1).long())).float()
group_count = group_map.sum(1)
group_denom = group_count + (group_count==0).float() # avoid nans
group_loss = (group_map @ losses.view(-1))/group_denom
return group_loss, group_count
def update_exp_avg_loss(self, group_loss, group_count):
## TODO: Chunting's code is doing a different kind of exponential averaging, exp_avf_initialized not used.
prev_weights = (1 - self.gamma*(group_count>0).float()) * (self.exp_avg_initialized>0).float()
curr_weights = 1 - prev_weights
# self.exp_avg_loss is updated only once, based off of group_loss accumulated over the entire batch.
self.exp_avg_loss = self.exp_avg_loss * prev_weights + group_loss*curr_weights
## TODO: Chunting's code is also doing an exponential averaging of counts (with alpha 0.05)
## update count_cat only once at the end of gradient accumulation.
self.count_cat = self.count_cat.mul(1 - 0.05).add(group_count, alpha=0.05)
self.exp_avg_initialized = (self.exp_avg_initialized>0) + (group_count>0)
def reset_stats(self):
self.processed_data_counts = self._prepare_input(torch.zeros(self.n_groups))
self.update_data_counts = self._prepare_input(torch.zeros(self.n_groups))
self.update_batch_counts = self._prepare_input(torch.zeros(self.n_groups))
self.avg_group_loss = self._prepare_input(torch.zeros(self.n_groups))
self.avg_group_acc = self._prepare_input(torch.zeros(self.n_groups))
self.avg_per_sample_loss = 0.
self.avg_actual_loss = 0.
self.avg_acc = 0.
self.batch_count = 0.
#TODO: Chunting also sets weights to 1 here, and self.exp_avg_loss to 0
self.exp_avg_loss.fill_(0.)
self.adv_probs.fill_(1.)
def update_stats(self, actual_loss, group_loss, group_acc, group_count, weights=None):
# avg group loss
denom = self.processed_data_counts + group_count
denom += (denom==0).float()
prev_weight = self.processed_data_counts/denom
curr_weight = group_count/denom
self.avg_group_loss = prev_weight*self.avg_group_loss + curr_weight*group_loss
# avg group acc
self.avg_group_acc = prev_weight*self.avg_group_acc + curr_weight*group_acc
# batch-wise average actual loss
denom = self.batch_count + 1
self.avg_actual_loss = (self.batch_count/denom)*self.avg_actual_loss + (1/denom)*actual_loss
# counts
self.processed_data_counts += group_count
if self.is_robust:
self.update_data_counts += group_count*((weights>0).float())
self.update_batch_counts += ((group_count*weights)>0).float()
else:
self.update_data_counts += group_count
self.update_batch_counts += (group_count>0).float()
self.batch_count+=1
# avg per-sample quantities
group_frac = self.processed_data_counts/(self.processed_data_counts.sum())
self.avg_per_sample_loss = group_frac @ self.avg_group_loss
self.avg_acc = group_frac @ self.avg_group_acc
def get_model_stats(self, model, args, stats_dict):
model_norm_sq = 0.
for param in model.parameters():
model_norm_sq += torch.norm(param) ** 2
stats_dict['model_norm_sq'] = model_norm_sq.item()
stats_dict['reg_loss'] = args.weight_decay / 2 * model_norm_sq.item()
return stats_dict
def get_stats(self, model=None, args=None):
stats_dict = {}
for idx in range(self.n_groups):
stats_dict[f'avg_loss_group:{idx}'] = self.avg_group_loss[idx].item()
stats_dict[f'exp_avg_loss_group:{idx}'] = self.exp_avg_loss[idx].item()
stats_dict[f'avg_acc_group:{idx}'] = self.avg_group_acc[idx].item()
stats_dict[f'processed_data_count_group:{idx}'] = self.processed_data_counts[idx].item()
stats_dict[f'update_data_count_group:{idx}'] = self.update_data_counts[idx].item()
stats_dict[f'update_batch_count_group:{idx}'] = self.update_batch_counts[idx].item()
stats_dict['avg_actual_loss'] = self.avg_actual_loss.item()
stats_dict['avg_per_sample_loss'] = self.avg_per_sample_loss.item()
stats_dict['avg_acc'] = self.avg_acc.item()
# Model stats
if model is not None:
assert args is not None
stats_dict = self.get_model_stats(model, args, stats_dict)
return stats_dict
def log_stats(self, logger, is_training):
if logger is None:
return
logger.info(f'Average incurred loss: {self.avg_per_sample_loss.item():.3f} \n')
logger.info(f'Average sample loss: {self.avg_actual_loss.item():.3f} \n')
logger.info(f'Average acc: {self.avg_acc.item():.3f} \n')
for group_idx in range(self.n_groups):
logger.info(
# f' {self.group_str(group_idx)} '
f'[n = {int(self.processed_data_counts[group_idx])}]:\t'
f'loss = {self.avg_group_loss[group_idx]:.3f} '
f'exp loss = {self.exp_avg_loss[group_idx]:.3f} '
f'adjusted loss = {self.exp_avg_loss[group_idx] + self.adj[group_idx]/torch.sqrt(self.group_counts)[group_idx]:.3f} '
f'adv prob = {self.adv_probs[group_idx]:3f} '
f'acc = {self.avg_group_acc[group_idx]:.3f}\n')
# logger.flush()
def compute_beta_cover(self, seed, epoch, dataset, losses=None):
split_array = np.array([item["group"] for item in dataset])
total = len(split_array)
if losses is not None:
if self.accum_losses is None:
self.accum_losses = losses
else:
self.accum_losses = self.accum_losses * (1 - self.beta_ema) + losses * self.beta_ema
for gidx in range(self.n_groups):
select_idx = np.where(split_array == gidx)[0]
count = len(select_idx)
idx_sorted = np.argsort(self.accum_losses[select_idx])
idx = select_idx[idx_sorted][::-1]
cutoff_count = int((total - count) * count * self.beta / (total - count * self.beta))
self.weight_array[idx] = count / total
self.weight_array[idx[:cutoff_count]] = 1.0 / self.beta
else:
self.weight_array = np.ones(total)
return self.weight_array
| 13,707 | 47.098246 | 189 | py |
robust-transformers | robust-transformers-main/src/transformers/optimization.py | # coding=utf-8
# Copyright 2018 The Google AI Language Team Authors and The HuggingFace Inc. team.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
"""PyTorch optimization for BERT model."""
import math
import warnings
from typing import Callable, Iterable, Optional, Tuple, Union
import torch
from torch import nn
from torch.optim import Optimizer
from torch.optim.lr_scheduler import LambdaLR
from .trainer_utils import SchedulerType
from .utils import logging
from .utils.versions import require_version
logger = logging.get_logger(__name__)
def get_constant_schedule(optimizer: Optimizer, last_epoch: int = -1):
"""
Create a schedule with a constant learning rate, using the learning rate set in optimizer.
Args:
optimizer ([`~torch.optim.Optimizer`]):
The optimizer for which to schedule the learning rate.
last_epoch (`int`, *optional*, defaults to -1):
The index of the last epoch when resuming training.
Return:
`torch.optim.lr_scheduler.LambdaLR` with the appropriate schedule.
"""
return LambdaLR(optimizer, lambda _: 1, last_epoch=last_epoch)
def get_constant_schedule_with_warmup(optimizer: Optimizer, num_warmup_steps: int, last_epoch: int = -1):
"""
Create a schedule with a constant learning rate preceded by a warmup period during which the learning rate
increases linearly between 0 and the initial lr set in the optimizer.
Args:
optimizer ([`~torch.optim.Optimizer`]):
The optimizer for which to schedule the learning rate.
num_warmup_steps (`int`):
The number of steps for the warmup phase.
last_epoch (`int`, *optional*, defaults to -1):
The index of the last epoch when resuming training.
Return:
`torch.optim.lr_scheduler.LambdaLR` with the appropriate schedule.
"""
def lr_lambda(current_step: int):
if current_step < num_warmup_steps:
return float(current_step) / float(max(1.0, num_warmup_steps))
return 1.0
return LambdaLR(optimizer, lr_lambda, last_epoch=last_epoch)
def get_linear_schedule_with_warmup(optimizer, num_warmup_steps, num_training_steps, last_epoch=-1):
"""
Create a schedule with a learning rate that decreases linearly from the initial lr set in the optimizer to 0, after
a warmup period during which it increases linearly from 0 to the initial lr set in the optimizer.
Args:
optimizer ([`~torch.optim.Optimizer`]):
The optimizer for which to schedule the learning rate.
num_warmup_steps (`int`):
The number of steps for the warmup phase.
num_training_steps (`int`):
The total number of training steps.
last_epoch (`int`, *optional*, defaults to -1):
The index of the last epoch when resuming training.
Return:
`torch.optim.lr_scheduler.LambdaLR` with the appropriate schedule.
"""
def lr_lambda(current_step: int):
if current_step < num_warmup_steps:
return float(current_step) / float(max(1, num_warmup_steps))
return max(
0.0, float(num_training_steps - current_step) / float(max(1, num_training_steps - num_warmup_steps))
)
return LambdaLR(optimizer, lr_lambda, last_epoch)
def get_cosine_schedule_with_warmup(
optimizer: Optimizer, num_warmup_steps: int, num_training_steps: int, num_cycles: float = 0.5, last_epoch: int = -1
):
"""
Create a schedule with a learning rate that decreases following the values of the cosine function between the
initial lr set in the optimizer to 0, after a warmup period during which it increases linearly between 0 and the
initial lr set in the optimizer.
Args:
optimizer ([`~torch.optim.Optimizer`]):
The optimizer for which to schedule the learning rate.
num_warmup_steps (`int`):
The number of steps for the warmup phase.
num_training_steps (`int`):
The total number of training steps.
num_cycles (`float`, *optional*, defaults to 0.5):
The number of waves in the cosine schedule (the defaults is to just decrease from the max value to 0
following a half-cosine).
last_epoch (`int`, *optional*, defaults to -1):
The index of the last epoch when resuming training.
Return:
`torch.optim.lr_scheduler.LambdaLR` with the appropriate schedule.
"""
def lr_lambda(current_step):
if current_step < num_warmup_steps:
return float(current_step) / float(max(1, num_warmup_steps))
progress = float(current_step - num_warmup_steps) / float(max(1, num_training_steps - num_warmup_steps))
return max(0.0, 0.5 * (1.0 + math.cos(math.pi * float(num_cycles) * 2.0 * progress)))
return LambdaLR(optimizer, lr_lambda, last_epoch)
def get_cosine_with_hard_restarts_schedule_with_warmup(
optimizer: Optimizer, num_warmup_steps: int, num_training_steps: int, num_cycles: int = 1, last_epoch: int = -1
):
"""
Create a schedule with a learning rate that decreases following the values of the cosine function between the
initial lr set in the optimizer to 0, with several hard restarts, after a warmup period during which it increases
linearly between 0 and the initial lr set in the optimizer.
Args:
optimizer ([`~torch.optim.Optimizer`]):
The optimizer for which to schedule the learning rate.
num_warmup_steps (`int`):
The number of steps for the warmup phase.
num_training_steps (`int`):
The total number of training steps.
num_cycles (`int`, *optional*, defaults to 1):
The number of hard restarts to use.
last_epoch (`int`, *optional*, defaults to -1):
The index of the last epoch when resuming training.
Return:
`torch.optim.lr_scheduler.LambdaLR` with the appropriate schedule.
"""
def lr_lambda(current_step):
if current_step < num_warmup_steps:
return float(current_step) / float(max(1, num_warmup_steps))
progress = float(current_step - num_warmup_steps) / float(max(1, num_training_steps - num_warmup_steps))
if progress >= 1.0:
return 0.0
return max(0.0, 0.5 * (1.0 + math.cos(math.pi * ((float(num_cycles) * progress) % 1.0))))
return LambdaLR(optimizer, lr_lambda, last_epoch)
def get_polynomial_decay_schedule_with_warmup(
optimizer, num_warmup_steps, num_training_steps, lr_end=1e-7, power=1.0, last_epoch=-1
):
"""
Create a schedule with a learning rate that decreases as a polynomial decay from the initial lr set in the
optimizer to end lr defined by *lr_end*, after a warmup period during which it increases linearly from 0 to the
initial lr set in the optimizer.
Args:
optimizer ([`~torch.optim.Optimizer`]):
The optimizer for which to schedule the learning rate.
num_warmup_steps (`int`):
The number of steps for the warmup phase.
num_training_steps (`int`):
The total number of training steps.
lr_end (`float`, *optional*, defaults to 1e-7):
The end LR.
power (`float`, *optional*, defaults to 1.0):
Power factor.
last_epoch (`int`, *optional*, defaults to -1):
The index of the last epoch when resuming training.
Note: *power* defaults to 1.0 as in the fairseq implementation, which in turn is based on the original BERT
implementation at
https://github.com/google-research/bert/blob/f39e881b169b9d53bea03d2d341b31707a6c052b/optimization.py#L37
Return:
`torch.optim.lr_scheduler.LambdaLR` with the appropriate schedule.
"""
lr_init = optimizer.defaults["lr"]
if not (lr_init > lr_end):
raise ValueError(f"lr_end ({lr_end}) must be be smaller than initial lr ({lr_init})")
def lr_lambda(current_step: int):
if current_step < num_warmup_steps:
return float(current_step) / float(max(1, num_warmup_steps))
elif current_step > num_training_steps:
return lr_end / lr_init # as LambdaLR multiplies by lr_init
else:
lr_range = lr_init - lr_end
decay_steps = num_training_steps - num_warmup_steps
pct_remaining = 1 - (current_step - num_warmup_steps) / decay_steps
decay = lr_range * pct_remaining**power + lr_end
return decay / lr_init # as LambdaLR multiplies by lr_init
return LambdaLR(optimizer, lr_lambda, last_epoch)
TYPE_TO_SCHEDULER_FUNCTION = {
SchedulerType.LINEAR: get_linear_schedule_with_warmup,
SchedulerType.COSINE: get_cosine_schedule_with_warmup,
SchedulerType.COSINE_WITH_RESTARTS: get_cosine_with_hard_restarts_schedule_with_warmup,
SchedulerType.POLYNOMIAL: get_polynomial_decay_schedule_with_warmup,
SchedulerType.CONSTANT: get_constant_schedule,
SchedulerType.CONSTANT_WITH_WARMUP: get_constant_schedule_with_warmup,
}
def get_scheduler(
name: Union[str, SchedulerType],
optimizer: Optimizer,
num_warmup_steps: Optional[int] = None,
num_training_steps: Optional[int] = None,
):
"""
Unified API to get any scheduler from its name.
Args:
name (`str` or `SchedulerType`):
The name of the scheduler to use.
optimizer (`torch.optim.Optimizer`):
The optimizer that will be used during training.
num_warmup_steps (`int`, *optional*):
The number of warmup steps to do. This is not required by all schedulers (hence the argument being
optional), the function will raise an error if it's unset and the scheduler type requires it.
num_training_steps (`int``, *optional*):
The number of training steps to do. This is not required by all schedulers (hence the argument being
optional), the function will raise an error if it's unset and the scheduler type requires it.
"""
name = SchedulerType(name)
schedule_func = TYPE_TO_SCHEDULER_FUNCTION[name]
if name == SchedulerType.CONSTANT:
return schedule_func(optimizer)
# All other schedulers require `num_warmup_steps`
if num_warmup_steps is None:
raise ValueError(f"{name} requires `num_warmup_steps`, please provide that argument.")
if name == SchedulerType.CONSTANT_WITH_WARMUP:
return schedule_func(optimizer, num_warmup_steps=num_warmup_steps)
# All other schedulers require `num_training_steps`
if num_training_steps is None:
raise ValueError(f"{name} requires `num_training_steps`, please provide that argument.")
return schedule_func(optimizer, num_warmup_steps=num_warmup_steps, num_training_steps=num_training_steps)
class AdamW(Optimizer):
"""
Implements Adam algorithm with weight decay fix as introduced in [Decoupled Weight Decay
Regularization](https://arxiv.org/abs/1711.05101).
Parameters:
params (`Iterable[nn.parameter.Parameter]`):
Iterable of parameters to optimize or dictionaries defining parameter groups.
lr (`float`, *optional*, defaults to 1e-3):
The learning rate to use.
betas (`Tuple[float,float]`, *optional*, defaults to (0.9, 0.999)):
Adam's betas parameters (b1, b2).
eps (`float`, *optional*, defaults to 1e-6):
Adam's epsilon for numerical stability.
weight_decay (`float`, *optional*, defaults to 0):
Decoupled weight decay to apply.
correct_bias (`bool`, *optional*, defaults to `True`):
Whether or not to correct bias in Adam (for instance, in Bert TF repository they use `False`).
no_deprecation_warning (`bool`, *optional*, defaults to `False`):
A flag used to disable the deprecation warning (set to `True` to disable the warning).
"""
def __init__(
self,
params: Iterable[nn.parameter.Parameter],
lr: float = 1e-3,
betas: Tuple[float, float] = (0.9, 0.999),
eps: float = 1e-6,
weight_decay: float = 0.0,
correct_bias: bool = True,
no_deprecation_warning: bool = False,
):
if not no_deprecation_warning:
warnings.warn(
"This implementation of AdamW is deprecated and will be removed in a future version. Use the"
" PyTorch implementation torch.optim.AdamW instead, or set `no_deprecation_warning=True` to disable this warning",
FutureWarning,
)
require_version("torch>=1.5.0") # add_ with alpha
if lr < 0.0:
raise ValueError(f"Invalid learning rate: {lr} - should be >= 0.0")
if not 0.0 <= betas[0] < 1.0:
raise ValueError(f"Invalid beta parameter: {betas[0]} - should be in [0.0, 1.0)")
if not 0.0 <= betas[1] < 1.0:
raise ValueError(f"Invalid beta parameter: {betas[1]} - should be in [0.0, 1.0)")
if not 0.0 <= eps:
raise ValueError(f"Invalid epsilon value: {eps} - should be >= 0.0")
defaults = dict(lr=lr, betas=betas, eps=eps, weight_decay=weight_decay, correct_bias=correct_bias)
super().__init__(params, defaults)
def step(self, closure: Callable = None):
"""
Performs a single optimization step.
Arguments:
closure (`Callable`, *optional*): A closure that reevaluates the model and returns the loss.
"""
loss = None
if closure is not None:
loss = closure()
for group in self.param_groups:
for p in group["params"]:
if p.grad is None:
continue
grad = p.grad.data
if grad.is_sparse:
raise RuntimeError("Adam does not support sparse gradients, please consider SparseAdam instead")
state = self.state[p]
# State initialization
if len(state) == 0:
state["step"] = 0
# Exponential moving average of gradient values
state["exp_avg"] = torch.zeros_like(p.data)
# Exponential moving average of squared gradient values
state["exp_avg_sq"] = torch.zeros_like(p.data)
exp_avg, exp_avg_sq = state["exp_avg"], state["exp_avg_sq"]
beta1, beta2 = group["betas"]
state["step"] += 1
# Decay the first and second moment running average coefficient
# In-place operations to update the averages at the same time
exp_avg.mul_(beta1).add_(grad, alpha=(1.0 - beta1))
exp_avg_sq.mul_(beta2).addcmul_(grad, grad, value=1.0 - beta2)
denom = exp_avg_sq.sqrt().add_(group["eps"])
step_size = group["lr"]
if group["correct_bias"]: # No bias correction for Bert
bias_correction1 = 1.0 - beta1 ** state["step"]
bias_correction2 = 1.0 - beta2 ** state["step"]
step_size = step_size * math.sqrt(bias_correction2) / bias_correction1
p.data.addcdiv_(exp_avg, denom, value=-step_size)
# Just adding the square of the weights to the loss function is *not*
# the correct way of using L2 regularization/weight decay with Adam,
# since that will interact with the m and v parameters in strange ways.
#
# Instead we want to decay the weights in a manner that doesn't interact
# with the m/v parameters. This is equivalent to adding the square
# of the weights to the loss with plain (non-momentum) SGD.
# Add weight decay at the end (fixed version)
if group["weight_decay"] > 0.0:
p.data.add_(p.data, alpha=(-group["lr"] * group["weight_decay"]))
return loss
class Adafactor(Optimizer):
"""
AdaFactor pytorch implementation can be used as a drop in replacement for Adam original fairseq code:
https://github.com/pytorch/fairseq/blob/master/fairseq/optim/adafactor.py
Paper: *Adafactor: Adaptive Learning Rates with Sublinear Memory Cost* https://arxiv.org/abs/1804.04235 Note that
this optimizer internally adjusts the learning rate depending on the `scale_parameter`, `relative_step` and
`warmup_init` options. To use a manual (external) learning rate schedule you should set `scale_parameter=False` and
`relative_step=False`.
Arguments:
params (`Iterable[nn.parameter.Parameter]`):
Iterable of parameters to optimize or dictionaries defining parameter groups.
lr (`float`, *optional*):
The external learning rate.
eps (`Tuple[float, float]`, *optional*, defaults to (1e-30, 1e-3)):
Regularization constants for square gradient and parameter scale respectively
clip_threshold (`float`, *optional*, defaults 1.0):
Threshold of root mean square of final gradient update
decay_rate (`float`, *optional*, defaults to -0.8):
Coefficient used to compute running averages of square
beta1 (`float`, *optional*):
Coefficient used for computing running averages of gradient
weight_decay (`float`, *optional*, defaults to 0):
Weight decay (L2 penalty)
scale_parameter (`bool`, *optional*, defaults to `True`):
If True, learning rate is scaled by root mean square
relative_step (`bool`, *optional*, defaults to `True`):
If True, time-dependent learning rate is computed instead of external learning rate
warmup_init (`bool`, *optional*, defaults to `False`):
Time-dependent learning rate computation depends on whether warm-up initialization is being used
This implementation handles low-precision (FP16, bfloat) values, but we have not thoroughly tested.
Recommended T5 finetuning settings (https://discuss.huggingface.co/t/t5-finetuning-tips/684/3):
- Training without LR warmup or clip_threshold is not recommended.
- use scheduled LR warm-up to fixed LR
- use clip_threshold=1.0 (https://arxiv.org/abs/1804.04235)
- Disable relative updates
- Use scale_parameter=False
- Additional optimizer operations like gradient clipping should not be used alongside Adafactor
Example:
```python
Adafactor(model.parameters(), scale_parameter=False, relative_step=False, warmup_init=False, lr=1e-3)
```
Others reported the following combination to work well:
```python
Adafactor(model.parameters(), scale_parameter=True, relative_step=True, warmup_init=True, lr=None)
```
When using `lr=None` with [`Trainer`] you will most likely need to use [`~optimization.AdafactorSchedule`]
scheduler as following:
```python
from transformers.optimization import Adafactor, AdafactorSchedule
optimizer = Adafactor(model.parameters(), scale_parameter=True, relative_step=True, warmup_init=True, lr=None)
lr_scheduler = AdafactorSchedule(optimizer)
trainer = Trainer(..., optimizers=(optimizer, lr_scheduler))
```
Usage:
```python
# replace AdamW with Adafactor
optimizer = Adafactor(
model.parameters(),
lr=1e-3,
eps=(1e-30, 1e-3),
clip_threshold=1.0,
decay_rate=-0.8,
beta1=None,
weight_decay=0.0,
relative_step=False,
scale_parameter=False,
warmup_init=False,
)
```"""
def __init__(
self,
params,
lr=None,
eps=(1e-30, 1e-3),
clip_threshold=1.0,
decay_rate=-0.8,
beta1=None,
weight_decay=0.0,
scale_parameter=True,
relative_step=True,
warmup_init=False,
):
require_version("torch>=1.5.0") # add_ with alpha
if lr is not None and relative_step:
raise ValueError("Cannot combine manual `lr` and `relative_step=True` options")
if warmup_init and not relative_step:
raise ValueError("`warmup_init=True` requires `relative_step=True`")
defaults = dict(
lr=lr,
eps=eps,
clip_threshold=clip_threshold,
decay_rate=decay_rate,
beta1=beta1,
weight_decay=weight_decay,
scale_parameter=scale_parameter,
relative_step=relative_step,
warmup_init=warmup_init,
)
super().__init__(params, defaults)
@staticmethod
def _get_lr(param_group, param_state):
rel_step_sz = param_group["lr"]
if param_group["relative_step"]:
min_step = 1e-6 * param_state["step"] if param_group["warmup_init"] else 1e-2
rel_step_sz = min(min_step, 1.0 / math.sqrt(param_state["step"]))
param_scale = 1.0
if param_group["scale_parameter"]:
param_scale = max(param_group["eps"][1], param_state["RMS"])
return param_scale * rel_step_sz
@staticmethod
def _get_options(param_group, param_shape):
factored = len(param_shape) >= 2
use_first_moment = param_group["beta1"] is not None
return factored, use_first_moment
@staticmethod
def _rms(tensor):
return tensor.norm(2) / (tensor.numel() ** 0.5)
@staticmethod
def _approx_sq_grad(exp_avg_sq_row, exp_avg_sq_col):
# copy from fairseq's adafactor implementation:
# https://github.com/huggingface/transformers/blob/8395f14de6068012787d83989c3627c3df6a252b/src/transformers/optimization.py#L505
r_factor = (exp_avg_sq_row / exp_avg_sq_row.mean(dim=-1, keepdim=True)).rsqrt_().unsqueeze(-1)
c_factor = exp_avg_sq_col.unsqueeze(-2).rsqrt()
return torch.mul(r_factor, c_factor)
def step(self, closure=None):
"""
Performs a single optimization step
Arguments:
closure (callable, optional): A closure that reevaluates the model
and returns the loss.
"""
loss = None
if closure is not None:
loss = closure()
for group in self.param_groups:
for p in group["params"]:
if p.grad is None:
continue
grad = p.grad.data
if grad.dtype in {torch.float16, torch.bfloat16}:
grad = grad.float()
if grad.is_sparse:
raise RuntimeError("Adafactor does not support sparse gradients.")
state = self.state[p]
grad_shape = grad.shape
factored, use_first_moment = self._get_options(group, grad_shape)
# State Initialization
if len(state) == 0:
state["step"] = 0
if use_first_moment:
# Exponential moving average of gradient values
state["exp_avg"] = torch.zeros_like(grad)
if factored:
state["exp_avg_sq_row"] = torch.zeros(grad_shape[:-1]).to(grad)
state["exp_avg_sq_col"] = torch.zeros(grad_shape[:-2] + grad_shape[-1:]).to(grad)
else:
state["exp_avg_sq"] = torch.zeros_like(grad)
state["RMS"] = 0
else:
if use_first_moment:
state["exp_avg"] = state["exp_avg"].to(grad)
if factored:
state["exp_avg_sq_row"] = state["exp_avg_sq_row"].to(grad)
state["exp_avg_sq_col"] = state["exp_avg_sq_col"].to(grad)
else:
state["exp_avg_sq"] = state["exp_avg_sq"].to(grad)
p_data_fp32 = p.data
if p.data.dtype in {torch.float16, torch.bfloat16}:
p_data_fp32 = p_data_fp32.float()
state["step"] += 1
state["RMS"] = self._rms(p_data_fp32)
lr = self._get_lr(group, state)
beta2t = 1.0 - math.pow(state["step"], group["decay_rate"])
update = (grad**2) + group["eps"][0]
if factored:
exp_avg_sq_row = state["exp_avg_sq_row"]
exp_avg_sq_col = state["exp_avg_sq_col"]
exp_avg_sq_row.mul_(beta2t).add_(update.mean(dim=-1), alpha=(1.0 - beta2t))
exp_avg_sq_col.mul_(beta2t).add_(update.mean(dim=-2), alpha=(1.0 - beta2t))
# Approximation of exponential moving average of square of gradient
update = self._approx_sq_grad(exp_avg_sq_row, exp_avg_sq_col)
update.mul_(grad)
else:
exp_avg_sq = state["exp_avg_sq"]
exp_avg_sq.mul_(beta2t).add_(update, alpha=(1.0 - beta2t))
update = exp_avg_sq.rsqrt().mul_(grad)
update.div_((self._rms(update) / group["clip_threshold"]).clamp_(min=1.0))
update.mul_(lr)
if use_first_moment:
exp_avg = state["exp_avg"]
exp_avg.mul_(group["beta1"]).add_(update, alpha=(1 - group["beta1"]))
update = exp_avg
if group["weight_decay"] != 0:
p_data_fp32.add_(p_data_fp32, alpha=(-group["weight_decay"] * lr))
p_data_fp32.add_(-update)
if p.data.dtype in {torch.float16, torch.bfloat16}:
p.data.copy_(p_data_fp32)
return loss
class AdafactorSchedule(LambdaLR):
"""
Since [`~optimization.Adafactor`] performs its own scheduling, if the training loop relies on a scheduler (e.g.,
for logging), this class creates a proxy object that retrieves the current lr values from the optimizer.
It returns `initial_lr` during startup and the actual `lr` during stepping.
"""
def __init__(self, optimizer, initial_lr=0.0):
def lr_lambda(_):
return initial_lr
for group in optimizer.param_groups:
group["initial_lr"] = initial_lr
super().__init__(optimizer, lr_lambda)
for group in optimizer.param_groups:
del group["initial_lr"]
def get_lr(self):
opt = self.optimizer
lrs = [
opt._get_lr(group, opt.state[group["params"][0]])
for group in opt.param_groups
if group["params"][0].grad is not None
]
if len(lrs) == 0:
lrs = self.base_lrs # if called before stepping
return lrs
def get_adafactor_schedule(optimizer, initial_lr=0.0):
"""
Get a proxy schedule for [`~optimization.Adafactor`]
Args:
optimizer ([`~torch.optim.Optimizer`]):
The optimizer for which to schedule the learning rate.
initial_lr (`float`, *optional*, defaults to 0.0):
Initial lr
Return:
[`~optimization.Adafactor`] proxy schedule object.
"""
return AdafactorSchedule(optimizer, initial_lr)
| 27,756 | 40.366617 | 137 | py |
robust-transformers | robust-transformers-main/src/transformers/modeling_flax_pytorch_utils.py | # coding=utf-8
# Copyright 2021 The HuggingFace Inc. team.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
""" PyTorch - Flax general utilities."""
import os
from pickle import UnpicklingError
from typing import Dict, Tuple
import numpy as np
import jax
import jax.numpy as jnp
import transformers
from flax.serialization import from_bytes
from flax.traverse_util import flatten_dict, unflatten_dict
from .utils import logging
logger = logging.get_logger(__name__)
#####################
# PyTorch => Flax #
#####################
def load_pytorch_checkpoint_in_flax_state_dict(flax_model, pytorch_checkpoint_path, allow_missing_keys=False):
"""Load pytorch checkpoints in a flax model"""
try:
import torch # noqa: F401
except ImportError:
logger.error(
"Loading a PyTorch model in Flax, requires both PyTorch and Flax to be installed. Please see "
"https://pytorch.org/ and https://flax.readthedocs.io/en/latest/installation.html for installation instructions."
)
raise
pt_path = os.path.abspath(pytorch_checkpoint_path)
logger.info(f"Loading PyTorch weights from {pt_path}")
pt_state_dict = torch.load(pt_path, map_location="cpu")
logger.info(f"PyTorch checkpoint contains {sum(t.numel() for t in pt_state_dict.values()):,} parameters.")
flax_state_dict = convert_pytorch_state_dict_to_flax(pt_state_dict, flax_model)
return flax_state_dict
def rename_key_and_reshape_tensor(
pt_tuple_key: Tuple[str],
pt_tensor: np.ndarray,
random_flax_state_dict: Dict[str, jnp.ndarray],
model_prefix: str,
) -> (Tuple[str], np.ndarray):
"""Rename PT weight names to corresponding Flax weight names and reshape tensor if necessary"""
def is_key_or_prefix_key_in_dict(key: Tuple[str]) -> bool:
"""Checks if `key` of `(prefix,) + key` is in random_flax_state_dict"""
return len(set(random_flax_state_dict) & set([key, (model_prefix,) + key])) > 0
# layer norm
renamed_pt_tuple_key = pt_tuple_key[:-1] + ("scale",)
if pt_tuple_key[-1] in ["weight", "gamma"] and is_key_or_prefix_key_in_dict(renamed_pt_tuple_key):
return renamed_pt_tuple_key, pt_tensor
# embedding
renamed_pt_tuple_key = pt_tuple_key[:-1] + ("embedding",)
if pt_tuple_key[-1] == "weight" and is_key_or_prefix_key_in_dict(renamed_pt_tuple_key):
return renamed_pt_tuple_key, pt_tensor
# conv layer
renamed_pt_tuple_key = pt_tuple_key[:-1] + ("kernel",)
if pt_tuple_key[-1] == "weight" and pt_tensor.ndim == 4 and not is_key_or_prefix_key_in_dict(pt_tuple_key):
pt_tensor = pt_tensor.transpose(2, 3, 1, 0)
return renamed_pt_tuple_key, pt_tensor
# linear layer
renamed_pt_tuple_key = pt_tuple_key[:-1] + ("kernel",)
if pt_tuple_key[-1] == "weight" and not is_key_or_prefix_key_in_dict(pt_tuple_key):
pt_tensor = pt_tensor.T
return renamed_pt_tuple_key, pt_tensor
# old PyTorch layer norm weight
renamed_pt_tuple_key = pt_tuple_key[:-1] + ("weight",)
if pt_tuple_key[-1] == "gamma":
return renamed_pt_tuple_key, pt_tensor
# old PyTorch layer norm bias
renamed_pt_tuple_key = pt_tuple_key[:-1] + ("bias",)
if pt_tuple_key[-1] == "beta":
return renamed_pt_tuple_key, pt_tensor
return pt_tuple_key, pt_tensor
def convert_pytorch_state_dict_to_flax(pt_state_dict, flax_model):
# convert pytorch tensor to numpy
pt_state_dict = {k: v.numpy() for k, v in pt_state_dict.items()}
model_prefix = flax_model.base_model_prefix
random_flax_state_dict = flatten_dict(flax_model.params)
flax_state_dict = {}
load_model_with_head_into_base_model = (model_prefix not in flax_model.params) and (
model_prefix in set([k.split(".")[0] for k in pt_state_dict.keys()])
)
load_base_model_into_model_with_head = (model_prefix in flax_model.params) and (
model_prefix not in set([k.split(".")[0] for k in pt_state_dict.keys()])
)
# Need to change some parameters name to match Flax names
for pt_key, pt_tensor in pt_state_dict.items():
pt_tuple_key = tuple(pt_key.split("."))
# remove base model prefix if necessary
has_base_model_prefix = pt_tuple_key[0] == model_prefix
if load_model_with_head_into_base_model and has_base_model_prefix:
pt_tuple_key = pt_tuple_key[1:]
# Correctly rename weight parameters
flax_key, flax_tensor = rename_key_and_reshape_tensor(
pt_tuple_key, pt_tensor, random_flax_state_dict, model_prefix
)
# add model prefix if necessary
require_base_model_prefix = (model_prefix,) + flax_key in random_flax_state_dict
if load_base_model_into_model_with_head and require_base_model_prefix:
flax_key = (model_prefix,) + flax_key
if flax_key in random_flax_state_dict:
if flax_tensor.shape != random_flax_state_dict[flax_key].shape:
raise ValueError(
f"PyTorch checkpoint seems to be incorrect. Weight {pt_key} was expected to be of shape "
f"{random_flax_state_dict[flax_key].shape}, but is {flax_tensor.shape}."
)
# also add unexpected weight so that warning is thrown
flax_state_dict[flax_key] = jnp.asarray(flax_tensor)
return unflatten_dict(flax_state_dict)
#####################
# Flax => PyTorch #
#####################
def load_flax_checkpoint_in_pytorch_model(model, flax_checkpoint_path):
"""Load flax checkpoints in a PyTorch model"""
flax_checkpoint_path = os.path.abspath(flax_checkpoint_path)
logger.info(f"Loading Flax weights from {flax_checkpoint_path}")
# import correct flax class
flax_cls = getattr(transformers, "Flax" + model.__class__.__name__)
# load flax weight dict
with open(flax_checkpoint_path, "rb") as state_f:
try:
flax_state_dict = from_bytes(flax_cls, state_f.read())
except UnpicklingError:
raise EnvironmentError(f"Unable to convert {flax_checkpoint_path} to Flax deserializable object. ")
return load_flax_weights_in_pytorch_model(model, flax_state_dict)
def load_flax_weights_in_pytorch_model(pt_model, flax_state):
"""Load flax checkpoints in a PyTorch model"""
try:
import torch # noqa: F401
except ImportError:
logger.error(
"Loading a Flax weights in PyTorch, requires both PyTorch and Flax to be installed. Please see "
"https://pytorch.org/ and https://flax.readthedocs.io/en/latest/installation.html for installation instructions."
)
raise
# check if we have bf16 weights
is_type_bf16 = flatten_dict(jax.tree_map(lambda x: x.dtype == jnp.bfloat16, flax_state)).values()
if any(is_type_bf16):
# convert all weights to fp32 if the are bf16 since torch.from_numpy can-not handle bf16
# and bf16 is not fully supported in PT yet.
logger.warning(
"Found ``bfloat16`` weights in Flax model. Casting all ``bfloat16`` weights to ``float32`` "
"before loading those in PyTorch model."
)
flax_state = jax.tree_map(
lambda params: params.astype(np.float32) if params.dtype == jnp.bfloat16 else params, flax_state
)
flax_state_dict = flatten_dict(flax_state)
pt_model_dict = pt_model.state_dict()
load_model_with_head_into_base_model = (pt_model.base_model_prefix in flax_state) and (
pt_model.base_model_prefix not in set([k.split(".")[0] for k in pt_model_dict.keys()])
)
load_base_model_into_model_with_head = (pt_model.base_model_prefix not in flax_state) and (
pt_model.base_model_prefix in set([k.split(".")[0] for k in pt_model_dict.keys()])
)
# keep track of unexpected & missing keys
unexpected_keys = []
missing_keys = set(pt_model_dict.keys())
for flax_key_tuple, flax_tensor in flax_state_dict.items():
has_base_model_prefix = flax_key_tuple[0] == pt_model.base_model_prefix
require_base_model_prefix = ".".join((pt_model.base_model_prefix,) + flax_key_tuple) in pt_model_dict
# adapt flax_key to prepare for loading from/to base model only
if load_model_with_head_into_base_model and has_base_model_prefix:
flax_key_tuple = flax_key_tuple[1:]
elif load_base_model_into_model_with_head and require_base_model_prefix:
flax_key_tuple = (pt_model.base_model_prefix,) + flax_key_tuple
# rename flax weights to PyTorch format
if flax_key_tuple[-1] == "kernel" and flax_tensor.ndim == 4 and ".".join(flax_key_tuple) not in pt_model_dict:
# conv layer
flax_key_tuple = flax_key_tuple[:-1] + ("weight",)
flax_tensor = jnp.transpose(flax_tensor, (3, 2, 0, 1))
elif flax_key_tuple[-1] == "kernel" and ".".join(flax_key_tuple) not in pt_model_dict:
# linear layer
flax_key_tuple = flax_key_tuple[:-1] + ("weight",)
flax_tensor = flax_tensor.T
elif flax_key_tuple[-1] in ["scale", "embedding"]:
flax_key_tuple = flax_key_tuple[:-1] + ("weight",)
flax_key = ".".join(flax_key_tuple)
if flax_key in pt_model_dict:
if flax_tensor.shape != pt_model_dict[flax_key].shape:
raise ValueError(
f"Flax checkpoint seems to be incorrect. Weight {flax_key_tuple} was expected "
f"to be of shape {pt_model_dict[flax_key].shape}, but is {flax_tensor.shape}."
)
else:
# add weight to pytorch dict
flax_tensor = np.asarray(flax_tensor) if not isinstance(flax_tensor, np.ndarray) else flax_tensor
pt_model_dict[flax_key] = torch.from_numpy(flax_tensor)
# remove from missing keys
missing_keys.remove(flax_key)
else:
# weight is not expected by PyTorch model
unexpected_keys.append(flax_key)
pt_model.load_state_dict(pt_model_dict)
# re-transform missing_keys to list
missing_keys = list(missing_keys)
if len(unexpected_keys) > 0:
logger.warning(
"Some weights of the Flax model were not used when "
f"initializing the PyTorch model {pt_model.__class__.__name__}: {unexpected_keys}\n"
f"- This IS expected if you are initializing {pt_model.__class__.__name__} from a Flax model trained on another task "
"or with another architecture (e.g. initializing a BertForSequenceClassification model from a FlaxBertForPreTraining model).\n"
f"- This IS NOT expected if you are initializing {pt_model.__class__.__name__} from a Flax model that you expect "
"to be exactly identical (e.g. initializing a BertForSequenceClassification model from a FlaxBertForSequenceClassification model)."
)
else:
logger.warning(f"All Flax model weights were used when initializing {pt_model.__class__.__name__}.\n")
if len(missing_keys) > 0:
logger.warning(
f"Some weights of {pt_model.__class__.__name__} were not initialized from the Flax model "
f"and are newly initialized: {missing_keys}\n"
"You should probably TRAIN this model on a down-stream task to be able to use it for predictions and inference."
)
else:
logger.warning(
f"All the weights of {pt_model.__class__.__name__} were initialized from the Flax model.\n"
"If your task is similar to the task the model of the checkpoint was trained on, "
f"you can already use {pt_model.__class__.__name__} for predictions without further training."
)
return pt_model
| 12,296 | 41.403448 | 143 | py |
robust-transformers | robust-transformers-main/src/transformers/trainer_dro.py | # coding=utf-8
# Copyright 2020-present the HuggingFace Inc. team.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
"""
The Trainer class, to easily train a 🤗 Transformers from scratch or finetune it on a new task.
"""
import contextlib
import inspect
import math
import os
from attr import dataclass
import pandas as pd
import random
import re
import shutil
import sys
import time
import warnings
from collections.abc import Mapping
from pathlib import Path
from typing import TYPE_CHECKING, Any, Callable, Dict, List, Optional, Tuple, Union
from tqdm.auto import tqdm
# Integrations must be imported before ML frameworks:
from .integrations import ( # isort: split
default_hp_search_backend,
get_reporting_integration_callbacks,
hp_params,
is_fairscale_available,
is_optuna_available,
is_ray_tune_available,
is_sigopt_available,
is_wandb_available,
run_hp_search_optuna,
run_hp_search_ray,
run_hp_search_sigopt,
run_hp_search_wandb,
)
import numpy as np
import torch
from packaging import version
from torch import Tensor, nn
from torch.utils.data import DataLoader, Dataset, RandomSampler, SequentialSampler, BatchSampler
from torch.utils.data.distributed import DistributedSampler
from torch.utils.data.sampler import WeightedRandomSampler
from huggingface_hub import Repository
from . import __version__
from .configuration_utils import PretrainedConfig
from .data.data_collator import DataCollator, DataCollatorWithPadding, default_data_collator
from .debug_utils import DebugOption, DebugUnderflowOverflow
from .deepspeed import deepspeed_init, deepspeed_reinit, is_deepspeed_zero3_enabled
from .dependency_versions_check import dep_version_check
from .file_utils import (
CONFIG_NAME,
WEIGHTS_NAME,
get_full_repo_name,
is_apex_available,
is_datasets_available,
is_in_notebook,
is_sagemaker_dp_enabled,
is_sagemaker_mp_enabled,
is_torch_tpu_available,
)
from .modelcard import TrainingSummary
from .modeling_utils import PreTrainedModel, unwrap_model
from .models.auto.modeling_auto import MODEL_FOR_QUESTION_ANSWERING_MAPPING_NAMES
from .optimization import Adafactor, get_scheduler
from .tokenization_utils_base import PreTrainedTokenizerBase
from .trainer_callback import (
CallbackHandler,
DefaultFlowCallback,
PrinterCallback,
ProgressCallback,
TrainerCallback,
TrainerControl,
TrainerState,
)
from .trainer_pt_utils import (
DistributedLengthGroupedSampler,
DistributedSamplerWithLoop,
DistributedTensorGatherer,
IterableDatasetShard,
LabelSmoother,
LengthGroupedSampler,
SequentialDistributedSampler,
ShardSampler,
distributed_broadcast_scalars,
distributed_concat,
find_batch_size,
get_parameter_names,
nested_concat,
nested_detach,
nested_numpify,
nested_truncate,
nested_xla_mesh_reduce,
reissue_pt_warnings,
)
from .trainer_utils import (
PREFIX_CHECKPOINT_DIR,
BestRun,
EvalLoopOutput,
EvalPrediction,
HPSearchBackend,
HubStrategy,
IntervalStrategy,
PredictionOutput,
ShardedDDPOption,
TrainerMemoryTracker,
TrainOutput,
default_compute_objective,
default_hp_space,
denumpify_detensorize,
get_last_checkpoint,
has_length,
number_of_arguments,
set_seed,
speed_metrics,
)
from .training_args import OptimizerNames, ParallelMode, TrainingArguments
from .utils import logging
from .dro_loss import LossComputer, DroArguments
from .cgd_loss import CGDLossComputer
from .gcdro_loss import GCDROLossComputer
from transformers import dro_loss
from .trainer import Trainer
_is_torch_generator_available = False
_is_native_amp_available = False
DEFAULT_CALLBACKS = [DefaultFlowCallback]
DEFAULT_PROGRESS_CALLBACK = ProgressCallback
if is_in_notebook():
from .utils.notebook import NotebookProgressCallback
DEFAULT_PROGRESS_CALLBACK = NotebookProgressCallback
if is_apex_available():
from apex import amp
if version.parse(torch.__version__) >= version.parse("1.6"):
_is_torch_generator_available = True
_is_native_amp_available = True
from torch.cuda.amp import autocast
if is_datasets_available():
import datasets
if is_torch_tpu_available():
import torch_xla.core.xla_model as xm
import torch_xla.debug.metrics as met
import torch_xla.distributed.parallel_loader as pl
if is_fairscale_available():
dep_version_check("fairscale")
import fairscale
from fairscale.nn.data_parallel import FullyShardedDataParallel as FullyShardedDDP
from fairscale.nn.data_parallel import ShardedDataParallel as ShardedDDP
from fairscale.nn.wrap import auto_wrap
from fairscale.optim import OSS
from fairscale.optim.grad_scaler import ShardedGradScaler
if is_sagemaker_dp_enabled():
import smdistributed.dataparallel.torch.distributed as dist
from smdistributed.dataparallel.torch.parallel.distributed import DistributedDataParallel as DDP
else:
import torch.distributed as dist
if is_sagemaker_mp_enabled():
import smdistributed.modelparallel.torch as smp
from .trainer_pt_utils import smp_forward_backward, smp_forward_only, smp_gather, smp_nested_concat
if TYPE_CHECKING:
import optuna
logger = logging.get_logger(__name__)
# Name of the files used for checkpointing
TRAINING_ARGS_NAME = "training_args.bin"
TRAINER_STATE_NAME = "trainer_state.json"
OPTIMIZER_NAME = "optimizer.pt"
SCHEDULER_NAME = "scheduler.pt"
SCALER_NAME = "scaler.pt"
class TrainerDro(Trainer):
from .trainer_pt_utils import _get_learning_rate, log_metrics, metrics_format, save_metrics, save_state
def __init__(
self,
model: Union[PreTrainedModel, nn.Module] = None,
args: TrainingArguments = None,
dro_args: DroArguments = None,
data_collator: Optional[DataCollator] = None,
train_dataset: Optional[Dataset] = None,
eval_dataset: Optional[Dataset] = None,
tokenizer: Optional[PreTrainedTokenizerBase] = None,
model_init: Callable[[], PreTrainedModel] = None,
compute_metrics: Optional[Callable[[EvalPrediction], Dict]] = None,
callbacks: Optional[List[TrainerCallback]] = None,
optimizers: Tuple[torch.optim.Optimizer, torch.optim.lr_scheduler.LambdaLR] = (None, None),
preprocess_logits_for_metrics: Callable[[torch.Tensor, torch.Tensor], torch.Tensor] = None,
):
if args is None:
output_dir = "tmp_trainer"
logger.info(f"No `TrainingArguments` passed, using `output_dir={output_dir}`.")
args = TrainingArguments(output_dir=output_dir)
self.args = args
# Seed must be set before instantiating the model when using model
set_seed(self.args.seed)
self.hp_name = None
self.deepspeed = None
self.is_in_train = False
# memory metrics - must set up as early as possible
self._memory_tracker = TrainerMemoryTracker(self.args.skip_memory_metrics)
self._memory_tracker.start()
# set the correct log level depending on the node
log_level = args.get_process_log_level()
logging.set_verbosity(log_level)
# force device and distributed setup init explicitly
args._setup_devices
if model is None:
if model_init is not None:
self.model_init = model_init
model = self.call_model_init()
else:
raise RuntimeError("`Trainer` requires either a `model` or `model_init` argument")
else:
if model_init is not None:
warnings.warn(
"`Trainer` requires either a `model` or `model_init` argument, but not both. "
"`model_init` will overwrite your model when calling the `train` method. This will become a fatal error in the next release.",
FutureWarning,
)
self.model_init = model_init
if hasattr(model, "is_parallelizable") and model.is_parallelizable and model.model_parallel:
self.is_model_parallel = True
else:
self.is_model_parallel = False
# Setup Sharded DDP training
self.sharded_ddp = None
if len(args.sharded_ddp) > 0:
if args.deepspeed:
raise ValueError(
"Using --sharded_ddp xxx together with --deepspeed is not possible, deactivate one of those flags."
)
if args.local_rank == -1:
raise ValueError("Using sharded DDP only works in distributed training.")
elif not is_fairscale_available():
raise ImportError("Sharded DDP training requires fairscale: `pip install fairscale`.")
elif ShardedDDPOption.SIMPLE not in args.sharded_ddp and FullyShardedDDP is None:
raise ImportError(
"Sharded DDP in a mode other than simple training requires fairscale version >= 0.3, found "
f"{fairscale.__version__}. Upgrade your fairscale library: `pip install --upgrade fairscale`."
)
elif ShardedDDPOption.SIMPLE in args.sharded_ddp:
self.sharded_ddp = ShardedDDPOption.SIMPLE
elif ShardedDDPOption.ZERO_DP_2 in args.sharded_ddp:
self.sharded_ddp = ShardedDDPOption.ZERO_DP_2
elif ShardedDDPOption.ZERO_DP_3 in args.sharded_ddp:
self.sharded_ddp = ShardedDDPOption.ZERO_DP_3
# one place to sort out whether to place the model on device or not
# postpone switching model to cuda when:
# 1. MP - since we are trying to fit a much bigger than 1 gpu model
# 2. fp16-enabled DeepSpeed loads the model in half the size and it doesn't need .to() anyway,
# and we only use deepspeed for training at the moment
# 3. full bf16 or fp16 eval - since the model needs to be cast to the right dtype first
# 4. Sharded DDP - same as MP
self.place_model_on_device = args.place_model_on_device
if (
self.is_model_parallel
or args.deepspeed
or ((args.fp16_full_eval or args.bf16_full_eval) and not args.do_train)
or (self.sharded_ddp in [ShardedDDPOption.ZERO_DP_2, ShardedDDPOption.ZERO_DP_3])
):
self.place_model_on_device = False
default_collator = default_data_collator if tokenizer is None else DataCollatorWithPadding(tokenizer)
self.data_collator = data_collator if data_collator is not None else default_collator
self.train_dataset = train_dataset
self.eval_dataset = eval_dataset
self.tokenizer = tokenizer
if self.place_model_on_device:
self._move_model_to_device(model, args.device)
# Force n_gpu to 1 to avoid DataParallel as MP will manage the GPUs
if self.is_model_parallel:
self.args._n_gpu = 1
# later use `self.model is self.model_wrapped` to check if it's wrapped or not
self.model_wrapped = model
self.model = model
self.compute_metrics = compute_metrics
self.preprocess_logits_for_metrics = preprocess_logits_for_metrics
self.optimizer, self.lr_scheduler = optimizers
if model_init is not None and (self.optimizer is not None or self.lr_scheduler is not None):
raise RuntimeError(
"Passing a `model_init` is incompatible with providing the `optimizers` argument. "
"You should subclass `Trainer` and override the `create_optimizer_and_scheduler` method."
)
default_callbacks = DEFAULT_CALLBACKS + get_reporting_integration_callbacks(self.args.report_to)
callbacks = default_callbacks if callbacks is None else default_callbacks + callbacks
self.callback_handler = CallbackHandler(
callbacks, self.model, self.tokenizer, self.optimizer, self.lr_scheduler
)
self.add_callback(PrinterCallback if self.args.disable_tqdm else DEFAULT_PROGRESS_CALLBACK)
# Will be set to True by `self._setup_loggers()` on first call to `self.log()`.
self._loggers_initialized = False
if self.args.should_save:
os.makedirs(self.args.output_dir, exist_ok=True)
if not callable(self.data_collator) and callable(getattr(self.data_collator, "collate_batch", None)):
raise ValueError("The `data_collator` should be a simple callable (function, class with `__call__`).")
if args.max_steps > 0:
logger.info("max_steps is given, it will override any value given in num_train_epochs")
if train_dataset is not None and not has_length(train_dataset) and args.max_steps <= 0:
raise ValueError("train_dataset does not implement __len__, max_steps has to be specified")
if (
train_dataset is not None
and isinstance(train_dataset, torch.utils.data.IterableDataset)
and args.group_by_length
):
raise ValueError("the `--group_by_length` option is only available for `Dataset`, not `IterableDataset")
self._signature_columns = None
# Mixed precision setup
self.use_apex = False
self.use_amp = False
if args.fp16 or args.bf16:
if args.half_precision_backend == "auto":
if _is_native_amp_available:
args.half_precision_backend = "amp"
else:
if args.bf16:
raise ValueError("Tried to use `bf16` but native amp is not available")
else:
args.half_precision_backend = "apex"
logger.info(f"Using {args.half_precision_backend} half precision backend")
self.do_grad_scaling = False
if (args.fp16 or args.bf16) and not args.deepspeed: # deepspeed manages its own half precision
if args.half_precision_backend == "amp":
self.use_amp = True
self.amp_dtype = torch.float16 if args.fp16 else torch.bfloat16
self.do_grad_scaling = True
if is_sagemaker_mp_enabled():
self.scaler = smp.amp.GradScaler()
elif self.sharded_ddp is not None:
self.scaler = ShardedGradScaler()
elif is_torch_tpu_available():
from torch_xla.amp import GradScaler
self.scaler = GradScaler()
else:
self.scaler = torch.cuda.amp.GradScaler()
else:
if not is_apex_available():
raise ImportError(
"Using FP16 with APEX but APEX is not installed, please refer to https://www.github.com/nvidia/apex."
)
self.use_apex = True
# FP16 + model parallelism in SageMaker: gradient clipping does not work for now so we raise a helpful error.
if is_sagemaker_mp_enabled() and self.use_amp and args.max_grad_norm is not None and args.max_grad_norm > 0:
raise ValueError(
"SageMaker Model Parallelism in mixed precision mode does not support gradient clipping yet. Pass "
"along 'max_grad_norm': 0 in your hyperparameters."
)
# Label smoothing
if self.args.label_smoothing_factor != 0:
self.label_smoother = LabelSmoother(epsilon=self.args.label_smoothing_factor)
else:
self.label_smoother = None
self.state = TrainerState()
self.control = TrainerControl()
# Internal variable to count flos in each process, will be accumulated in `self.state.total_flos` then
# returned to 0 every time flos need to be logged
self.current_flos = 0
self.hp_search_backend = None
self.use_tune_checkpoints = False
default_label_names = (
["start_positions", "end_positions"]
if type(self.model).__name__ in MODEL_FOR_QUESTION_ANSWERING_MAPPING_NAMES.values()
else ["labels"]
)
self.label_names = default_label_names if self.args.label_names is None else self.args.label_names
self.control = self.callback_handler.on_init_end(self.args, self.state, self.control)
# very last
self._memory_tracker.stop_and_update_metrics()
# Create a DroLossClass object to maintain consistent information across epochs.
self.dro_args = dro_args
adjustments = [float(c) for c in dro_args.generalization_adjustment.split(',')]
assert len(adjustments) in (1, dro_args.n_groups)
if len(adjustments)==1:
adjustments = np.array(adjustments* dro_args.n_groups)
else:
adjustments = np.array(adjustments)
if dro_args.is_robust:
if dro_args.robust_algorithm == "GDRO":
self.train_loss_computer = LossComputer(
dro_args=dro_args,
training_args=args,
# dataset=dataset['train_data'], ## Why is this needed? to compute n_groups, group_counts which are passed as arguments now.
n_groups=dro_args.n_groups,
group_counts= dro_args.group_counts,
adj=adjustments)
elif dro_args.robust_algorithm == "CGD":
params = []
select = ['layer.10', 'layer.11', 'roberta.pooler.dense', 'classifier']
for name, param in self.model.named_parameters():
for s in select:
if (name.find(s) >= 0):
params.append(param)
break
self.train_loss_computer = CGDLossComputer(
dro_args=dro_args,
training_args=args,
# dataset=dataset['train_data'], ## Why is this needed? to compute n_groups, group_counts which are passed as arguments now.
n_groups=dro_args.n_groups,
group_counts= dro_args.group_counts,
params = params,
adj=adjustments)
elif dro_args.robust_algorithm == "GCDRO":
## In order to do instance reweighting at the end of every epoch, Dataset object will have to be separately defined?
self.train_loss_computer = GCDROLossComputer(
dro_args=dro_args,
training_args=args,
# dataset=dataset['train_data'], ## Why is this needed? to compute n_groups, group_counts which are passed as arguments now.
n_groups=dro_args.n_groups,
group_counts= dro_args.group_counts,
adj=adjustments)
self._add_columns()
def _remove_unused_columns(self, dataset: "datasets.Dataset", description: Optional[str] = None):
if not self.args.remove_unused_columns:
return dataset
if self._signature_columns is None:
# Inspect model forward signature to keep only the arguments it accepts.
signature = inspect.signature(self.model.forward)
self._signature_columns = list(signature.parameters.keys())
# Labels may be named label or label_ids, the default data collator handles that.
self._signature_columns += ["label", "label_ids"]
self._signature_columns += ["guid"]
self._signature_columns += ["group"]
self._signature_columns += ["group_distribution"]
self._signature_columns += ["instance_weight"]
ignored_columns = list(set(dataset.column_names) - set(self._signature_columns))
if len(ignored_columns) > 0:
dset_description = "" if description is None else f"in the {description} set "
logger.info(
f"The following columns {dset_description} don't have a corresponding argument in "
f"`{self.model.__class__.__name__}.forward` and have been ignored: {', '.join(ignored_columns)}."
f" If {', '.join(ignored_columns)} are not expected by `{self.model.__class__.__name__}.forward`, "
f" you can safely ignore this message."
)
columns = [k for k in self._signature_columns if k in dataset.column_names]
if version.parse(datasets.__version__) < version.parse("1.4.0"):
dataset.set_format(
type=dataset.format["type"], columns=columns, format_kwargs=dataset.format["format_kwargs"]
)
return dataset
else:
return dataset.remove_columns(ignored_columns)
def _add_columns(self):
seed = self.args.seed
epoch = 0
# Check if evaluating.
if self.train_dataset is not None:
instance_weights = self.train_loss_computer.compute_beta_cover(seed, epoch, self.train_dataset)
self.train_dataset = self.train_dataset.add_column("instance_weight", instance_weights)
def _update_columns(self, epoch):
# Iterate over training data to compute loss.
logger.info(f"---- Re-Weight at the begeinning of epoch {epoch} -----")
train_losses = None
dataset = self._remove_unused_columns(self.train_dataset, description="evaluation")
dataloader = DataLoader(
dataset,
sampler=SequentialSampler(dataset),
batch_size=self.args.train_batch_size,
collate_fn=self.data_collator,
drop_last=False,
num_workers=self.args.dataloader_num_workers,
pin_memory=self.args.dataloader_pin_memory,
)
model = self._wrap_model(self.model, training=False)
model.eval()
for step, inputs in tqdm(enumerate(dataloader)):
inputs = self._prepare_inputs(inputs)
with torch.no_grad():
groups = inputs["group"]
group_distributions = inputs.get("group_distribution", None)
instance_weights = inputs.get("instance_weight", None)
del inputs["group"]
if group_distributions is not None:
del inputs["group_distribution"]
if instance_weights is not None:
del inputs["instance_weight"]
loss, _ = self.compute_loss(model, inputs, return_outputs=True)
if train_losses is None:
train_losses = loss.detach().cpu().numpy()
else:
train_losses = np.append(train_losses, loss.detach().cpu().numpy(), axis=0)
# Process losses to compute beta cover weights
instance_weights = self.train_loss_computer.compute_beta_cover(self.args.seed, epoch, self.train_dataset, train_losses)
# Update "instance_weights of self.train_dataset in dataloader (in the middle of training)
# TODO: Check if the dataloader which is consistent, is actually using the updated weights.
self.train_dataset = self.train_dataset.remove_columns("instance_weight")
self.train_dataset = self.train_dataset.add_column("instance_weight", instance_weights)
def _get_train_sampler(self) -> Optional[torch.utils.data.Sampler]:
if not has_length(self.train_dataset):
return None
generator = None
if self.args.world_size <= 1 and _is_torch_generator_available:
generator = torch.Generator()
# for backwards compatibility, we generate a seed here (which is sampled from a generator seeded with
# `args.seed`) if data_seed isn't provided.
# Further on in this method, we default to `args.seed` instead.
if self.args.data_seed is None:
seed = int(torch.empty((), dtype=torch.int64).random_().item())
else:
seed = self.args.data_seed
generator.manual_seed(seed)
seed = self.args.data_seed if self.args.data_seed is not None else self.args.seed
# Build the sampler.
if self.args.group_by_length:
if is_datasets_available() and isinstance(self.train_dataset, datasets.Dataset):
lengths = (
self.train_dataset[self.args.length_column_name]
if self.args.length_column_name in self.train_dataset.column_names
else None
)
else:
lengths = None
model_input_name = self.tokenizer.model_input_names[0] if self.tokenizer is not None else None
if self.args.world_size <= 1:
return LengthGroupedSampler(
self.args.train_batch_size * self.args.gradient_accumulation_steps,
dataset=self.train_dataset,
lengths=lengths,
model_input_name=model_input_name,
generator=generator,
)
else:
return DistributedLengthGroupedSampler(
self.args.train_batch_size * self.args.gradient_accumulation_steps,
dataset=self.train_dataset,
num_replicas=self.args.world_size,
rank=self.args.process_index,
lengths=lengths,
model_input_name=model_input_name,
seed=seed,
)
else:
if self.args.world_size <= 1:
if _is_torch_generator_available:
if self.dro_args.reweight_groups:
# group_array = []
if self.dro_args.use_group_weights:
group_distributions = np.asarray([ex["group_distribution"] for ex in self.train_dataset])
group_array = np.argmax(group_distributions, axis=1)
else:
group_array = [ex["group"] for ex in self.train_dataset]
group_weights = len(self.train_dataset)/self._prepare_input(self.dro_args.group_counts)
weights = group_weights[group_array]
return WeightedRandomSampler(weights, len(self.train_dataset), replacement=True)
else:
return RandomSampler(self.train_dataset, generator=generator)
return RandomSampler(self.train_dataset)
elif (
self.args.parallel_mode in [ParallelMode.TPU, ParallelMode.SAGEMAKER_MODEL_PARALLEL]
and not self.args.dataloader_drop_last
):
# Use a loop for TPUs when drop_last is False to have all batches have the same size.
return DistributedSamplerWithLoop(
self.train_dataset,
batch_size=self.args.per_device_train_batch_size,
num_replicas=self.args.world_size,
rank=self.args.process_index,
seed=seed,
)
else:
return DistributedSampler(
self.train_dataset,
num_replicas=self.args.world_size,
rank=self.args.process_index,
seed=seed,
)
def create_optimizer(self):
"""
Setup the optimizer.
We provide a reasonable default that works well. If you want to use something else, you can pass a tuple in the
Trainer's init through `optimizers`, or subclass and override this method in a subclass.
"""
if self.optimizer is None:
decay_parameters = get_parameter_names(self.model, [nn.LayerNorm])
decay_parameters = [name for name in decay_parameters if "bias" not in name]
optimizer_grouped_parameters = [
{
"params": [p for n, p in self.model.named_parameters() if n in decay_parameters],
"weight_decay": self.args.weight_decay,
},
{
"params": [p for n, p in self.model.named_parameters() if n not in decay_parameters],
"weight_decay": 0.0,
},
]
optimizer_cls, optimizer_kwargs = TrainerDro.get_optimizer_cls_and_kwargs(self.args)
if self.sharded_ddp == ShardedDDPOption.SIMPLE:
self.optimizer = OSS(
params=optimizer_grouped_parameters,
optim=optimizer_cls,
**optimizer_kwargs,
)
else:
self.optimizer = optimizer_cls(optimizer_grouped_parameters, **optimizer_kwargs)
if is_sagemaker_mp_enabled():
self.optimizer = smp.DistributedOptimizer(self.optimizer)
return self.optimizer
@staticmethod
def get_optimizer_cls_and_kwargs(args: TrainingArguments) -> Tuple[Any, Any]:
"""
Returns the optimizer class and optimizer parameters based on the training arguments.
Args:
args (`transformers.training_args.TrainingArguments`):
The training arguments for the training session.
"""
optimizer_kwargs = {"lr": args.learning_rate}
adam_kwargs = {
"betas": (args.adam_beta1, args.adam_beta2),
"eps": args.adam_epsilon,
}
if args.optim == OptimizerNames.ADAFACTOR:
optimizer_cls = Adafactor
optimizer_kwargs.update({"scale_parameter": False, "relative_step": False})
elif args.optim == OptimizerNames.ADAMW_HF:
from .optimization import AdamW
optimizer_cls = AdamW
optimizer_kwargs.update(adam_kwargs)
elif args.optim == OptimizerNames.ADAMW_TORCH:
from torch.optim import AdamW
optimizer_cls = AdamW
optimizer_kwargs.update(adam_kwargs)
elif args.optim == OptimizerNames.ADAMW_TORCH_XLA:
try:
from torch_xla.amp.syncfree import AdamW
optimizer_cls = AdamW
optimizer_kwargs.update(adam_kwargs)
except ImportError:
raise ValueError("Trainer failed to import syncfree AdamW from torch_xla.")
elif args.optim == OptimizerNames.ADAMW_APEX_FUSED:
try:
from apex.optimizers import FusedAdam
optimizer_cls = FusedAdam
optimizer_kwargs.update(adam_kwargs)
except ImportError:
raise ValueError("Trainer tried to instantiate apex FusedAdam but apex is not installed!")
else:
raise ValueError(f"Trainer cannot instantiate unsupported optimizer: {args.optim}")
return optimizer_cls, optimizer_kwargs
def log_training_dynamics(self, output_dir: os.path,
epoch: int,
train_ids: List[int],
train_logits: List[List[float]],
train_golds: List[int]):
"""
Save training dynamics (logits) from given epoch as records of a `.jsonl` file.
"""
td_df = pd.DataFrame({"guid": train_ids,
f"logits_epoch_{epoch}": train_logits,
"gold": train_golds})
logging_dir = os.path.join(output_dir, f"training_dynamics")
# Create directory for logging training dynamics, if it doesn't already exist.
if not os.path.exists(logging_dir):
os.makedirs(logging_dir, exist_ok=True)
epoch_file_name = os.path.join(logging_dir, f"dynamics_epoch_{epoch}.jsonl")
td_df.to_json(epoch_file_name, lines=True, orient="records")
logger.info(f"Training Dynamics logged to {epoch_file_name}")
def log_dro_dynamics(self, output_dir: os.path,
epochs: List[int],
iterations: List[int],
group_probs: List[List[float]],
group_losses: List[List[float]],
):
td_df = pd.DataFrame({"epoch": epochs,
f"iteration": iterations,
"group_weight": group_probs,
"group_loss": group_losses})
logging_dir = os.path.join(output_dir, f"dro_dynamics")
# Create directory for logging training dynamics, if it doesn't already exist.
if not os.path.exists(logging_dir):
os.makedirs(logging_dir, exist_ok=True)
epoch_file_name = os.path.join(logging_dir, f"dro_dynamics.jsonl")
td_df.to_json(epoch_file_name, lines=True, orient="records")
logger.info(f"Training Dynamics logged to {epoch_file_name}")
def train(
self,
resume_from_checkpoint: Optional[Union[str, bool]] = None,
trial: Union["optuna.Trial", Dict[str, Any]] = None,
ignore_keys_for_eval: Optional[List[str]] = None,
**kwargs,
):
"""
Main training entry point.
Args:
resume_from_checkpoint (`str` or `bool`, *optional*):
If a `str`, local path to a saved checkpoint as saved by a previous instance of [`Trainer`]. If a
`bool` and equals `True`, load the last checkpoint in *args.output_dir* as saved by a previous instance
of [`Trainer`]. If present, training will resume from the model/optimizer/scheduler states loaded here.
trial (`optuna.Trial` or `Dict[str, Any]`, *optional*):
The trial run or the hyperparameter dictionary for hyperparameter search.
ignore_keys_for_eval (`List[str]`, *optional*)
A list of keys in the output of your model (if it is a dictionary) that should be ignored when
gathering predictions for evaluation during the training.
kwargs:
Additional keyword arguments used to hide deprecated arguments
"""
resume_from_checkpoint = None if not resume_from_checkpoint else resume_from_checkpoint
# memory metrics - must set up as early as possible
self._memory_tracker.start()
args = self.args
self.is_in_train = True
# do_train is not a reliable argument, as it might not be set and .train() still called, so
# the following is a workaround:
if (args.fp16_full_eval or args.bf16_full_eval) and not args.do_train:
self._move_model_to_device(self.model, args.device)
if "model_path" in kwargs:
resume_from_checkpoint = kwargs.pop("model_path")
warnings.warn(
"`model_path` is deprecated and will be removed in a future version. Use `resume_from_checkpoint` "
"instead.",
FutureWarning,
)
if len(kwargs) > 0:
raise TypeError(f"train() received got unexpected keyword arguments: {', '.join(list(kwargs.keys()))}.")
# This might change the seed so needs to run first.
self._hp_search_setup(trial)
# Model re-init
model_reloaded = False
if self.model_init is not None:
# Seed must be set before instantiating the model when using model_init.
set_seed(args.seed)
self.model = self.call_model_init(trial)
model_reloaded = True
# Reinitializes optimizer and scheduler
self.optimizer, self.lr_scheduler = None, None
# Load potential model checkpoint
if isinstance(resume_from_checkpoint, bool) and resume_from_checkpoint:
resume_from_checkpoint = get_last_checkpoint(args.output_dir)
if resume_from_checkpoint is None:
raise ValueError(f"No valid checkpoint found in output directory ({args.output_dir})")
if resume_from_checkpoint is not None:
if not os.path.isfile(os.path.join(resume_from_checkpoint, WEIGHTS_NAME)):
raise ValueError(f"Can't find a valid checkpoint at {resume_from_checkpoint}")
logger.info(f"Loading model from {resume_from_checkpoint}).")
if os.path.isfile(os.path.join(resume_from_checkpoint, CONFIG_NAME)):
config = PretrainedConfig.from_json_file(os.path.join(resume_from_checkpoint, CONFIG_NAME))
checkpoint_version = config.transformers_version
if checkpoint_version is not None and checkpoint_version != __version__:
logger.warning(
f"You are resuming training from a checkpoint trained with {checkpoint_version} of "
f"Transformers but your current version is {__version__}. This is not recommended and could "
"yield to errors or unwanted behaviors."
)
if args.deepspeed:
# will be resumed in deepspeed_init
pass
else:
# We load the model state dict on the CPU to avoid an OOM error.
state_dict = torch.load(os.path.join(resume_from_checkpoint, WEIGHTS_NAME), map_location="cpu")
# If the model is on the GPU, it still works!
self._load_state_dict_in_model(state_dict)
# release memory
del state_dict
# If model was re-initialized, put it on the right device and update self.model_wrapped
if model_reloaded:
if self.place_model_on_device:
self._move_model_to_device(self.model, args.device)
self.model_wrapped = self.model
# Keeping track whether we can can len() on the dataset or not
train_dataset_is_sized = has_length(self.train_dataset)
# Data loader and number of training steps
train_dataloader = self.get_train_dataloader()
# Setting up training control variables:
# number of training epochs: num_train_epochs
# number of training steps per epoch: num_update_steps_per_epoch
# total number of training steps to execute: max_steps
total_train_batch_size = args.train_batch_size * args.gradient_accumulation_steps * args.world_size
if train_dataset_is_sized:
num_update_steps_per_epoch = len(train_dataloader) // args.gradient_accumulation_steps
num_update_steps_per_epoch = max(num_update_steps_per_epoch, 1)
if args.max_steps > 0:
max_steps = args.max_steps
num_train_epochs = args.max_steps // num_update_steps_per_epoch + int(
args.max_steps % num_update_steps_per_epoch > 0
)
# May be slightly incorrect if the last batch in the training datalaoder has a smaller size but it's
# the best we can do.
num_train_samples = args.max_steps * total_train_batch_size
else:
max_steps = math.ceil(args.num_train_epochs * num_update_steps_per_epoch)
num_train_epochs = math.ceil(args.num_train_epochs)
num_train_samples = len(self.train_dataset) * args.num_train_epochs
else:
# see __init__. max_steps is set when the dataset has no __len__
max_steps = args.max_steps
# Setting a very large number of epochs so we go as many times as necessary over the iterator.
num_train_epochs = sys.maxsize
num_update_steps_per_epoch = max_steps
num_train_samples = args.max_steps * total_train_batch_size
if DebugOption.UNDERFLOW_OVERFLOW in self.args.debug:
if self.args.n_gpu > 1:
# nn.DataParallel(model) replicates the model, creating new variables and module
# references registered here no longer work on other gpus, breaking the module
raise ValueError(
"Currently --debug underflow_overflow is not supported under DP. Please use DDP (torch.distributed.launch)."
)
else:
debug_overflow = DebugUnderflowOverflow(self.model) # noqa
delay_optimizer_creation = (
self.sharded_ddp is not None and self.sharded_ddp != ShardedDDPOption.SIMPLE or is_sagemaker_mp_enabled()
)
if args.deepspeed:
deepspeed_engine, optimizer, lr_scheduler = deepspeed_init(
self, num_training_steps=max_steps, resume_from_checkpoint=resume_from_checkpoint
)
self.model = deepspeed_engine.module
self.model_wrapped = deepspeed_engine
self.deepspeed = deepspeed_engine
self.optimizer = optimizer
self.lr_scheduler = lr_scheduler
elif not delay_optimizer_creation:
self.create_optimizer_and_scheduler(num_training_steps=max_steps)
self.state = TrainerState()
self.state.is_hyper_param_search = trial is not None
# Activate gradient checkpointing if needed
if args.gradient_checkpointing:
self.model.gradient_checkpointing_enable()
model = self._wrap_model(self.model_wrapped)
# for the rest of this function `model` is the outside model, whether it was wrapped or not
if model is not self.model:
self.model_wrapped = model
if delay_optimizer_creation:
self.create_optimizer_and_scheduler(num_training_steps=max_steps)
# Check if saved optimizer or scheduler states exist
self._load_optimizer_and_scheduler(resume_from_checkpoint)
# important: at this point:
# self.model is the Transformers Model
# self.model_wrapped is DDP(Transformers Model), Deepspeed(Transformers Model), etc.
# Train!
num_examples = (
self.num_examples(train_dataloader) if train_dataset_is_sized else total_train_batch_size * args.max_steps
)
logger.info("***** Running training *****")
logger.info(f" Num examples = {num_examples}")
logger.info(f" Num Epochs = {num_train_epochs}")
logger.info(f" Instantaneous batch size per device = {args.per_device_train_batch_size}")
logger.info(f" Total train batch size (w. parallel, distributed & accumulation) = {total_train_batch_size}")
logger.info(f" Gradient Accumulation steps = {args.gradient_accumulation_steps}")
logger.info(f" Total optimization steps = {max_steps}")
self.state.epoch = 0
start_time = time.time()
epochs_trained = 0
steps_trained_in_current_epoch = 0
steps_trained_progress_bar = None
# Check if continuing training from a checkpoint
if resume_from_checkpoint is not None and os.path.isfile(
os.path.join(resume_from_checkpoint, TRAINER_STATE_NAME)
):
self.state = TrainerState.load_from_json(os.path.join(resume_from_checkpoint, TRAINER_STATE_NAME))
epochs_trained = self.state.global_step // num_update_steps_per_epoch
if not args.ignore_data_skip:
steps_trained_in_current_epoch = self.state.global_step % (num_update_steps_per_epoch)
steps_trained_in_current_epoch *= args.gradient_accumulation_steps
else:
steps_trained_in_current_epoch = 0
logger.info(" Continuing training from checkpoint, will skip to saved global_step")
logger.info(f" Continuing training from epoch {epochs_trained}")
logger.info(f" Continuing training from global step {self.state.global_step}")
if not args.ignore_data_skip:
logger.info(
f" Will skip the first {epochs_trained} epochs then the first {steps_trained_in_current_epoch} "
"batches in the first epoch. If this takes a lot of time, you can add the `--ignore_data_skip` "
"flag to your launch command, but you will resume the training on data already seen by your model."
)
if self.is_local_process_zero() and not args.disable_tqdm:
steps_trained_progress_bar = tqdm(total=steps_trained_in_current_epoch)
steps_trained_progress_bar.set_description("Skipping the first batches")
# Update the references
self.callback_handler.model = self.model
self.callback_handler.optimizer = self.optimizer
self.callback_handler.lr_scheduler = self.lr_scheduler
self.callback_handler.train_dataloader = train_dataloader
self.state.trial_name = self.hp_name(trial) if self.hp_name is not None else None
if trial is not None:
assignments = trial.assignments if self.hp_search_backend == HPSearchBackend.SIGOPT else trial
self.state.trial_params = hp_params(assignments)
else:
self.state.trial_params = None
# This should be the same if the state has been saved but in case the training arguments changed, it's safer
# to set this after the load.
self.state.max_steps = max_steps
self.state.num_train_epochs = num_train_epochs
self.state.is_local_process_zero = self.is_local_process_zero()
self.state.is_world_process_zero = self.is_world_process_zero()
# tr_loss is a tensor to avoid synchronization of TPUs through .item()
tr_loss = torch.tensor(0.0).to(args.device)
# _total_loss_scalar is updated everytime .item() has to be called on tr_loss and stores the sum of all losses
self._total_loss_scalar = 0.0
self._globalstep_last_logged = self.state.global_step
model.zero_grad()
self.control = self.callback_handler.on_train_begin(args, self.state, self.control)
# Skip the first epochs_trained epochs to get the random state of the dataloader at the right point.
if not args.ignore_data_skip:
for epoch in range(epochs_trained):
# We just need to begin an iteration to create the randomization of the sampler.
for _ in train_dataloader:
break
# Create dro dynamics variable.
epoch_list = []
iteration_list = []
group_assignment_list = []
group_loss_list = []
# Book-keeping for model selection
worst_valid_acc = None
valid_acc = None
bad_counts = 0
resplit_train_epoch = 0
for epoch in range(epochs_trained, num_train_epochs):
if isinstance(train_dataloader, DataLoader) and isinstance(train_dataloader.sampler, DistributedSampler):
train_dataloader.sampler.set_epoch(epoch)
elif isinstance(train_dataloader.dataset, IterableDatasetShard):
train_dataloader.dataset.set_epoch(epoch)
if is_torch_tpu_available():
parallel_loader = pl.ParallelLoader(train_dataloader, [args.device]).per_device_loader(args.device)
epoch_iterator = parallel_loader
else:
epoch_iterator = train_dataloader
# Reset the past mems state at the beginning of each epoch if necessary.
if args.past_index >= 0:
self._past = None
steps_in_epoch = (
len(epoch_iterator) if train_dataset_is_sized else args.max_steps * args.gradient_accumulation_steps
)
self.control = self.callback_handler.on_epoch_begin(args, self.state, self.control)
step = -1
# Create training dynamics information.
train_ids = None
train_golds = None
train_logits = None
train_losses = None
for step, inputs in enumerate(epoch_iterator):
# Skip past any already trained steps if resuming training
if steps_trained_in_current_epoch > 0:
steps_trained_in_current_epoch -= 1
if steps_trained_progress_bar is not None:
steps_trained_progress_bar.update(1)
if steps_trained_in_current_epoch == 0:
self._load_rng_state(resume_from_checkpoint)
continue
elif steps_trained_progress_bar is not None:
steps_trained_progress_bar.close()
steps_trained_progress_bar = None
if step % args.gradient_accumulation_steps == 0:
self.control = self.callback_handler.on_step_begin(args, self.state, self.control)
train_ids_batch = inputs["guid"]
if (
((step + 1) % args.gradient_accumulation_steps != 0)
and args.local_rank != -1
and args._no_sync_in_gradient_accumulation
):
# Avoid unnecessary DDP synchronization since there will be no backward pass on this example.
with model.no_sync():
tr_loss_step, batch_logits = self.training_step(model, inputs)
else:
tr_loss_step, batch_logits = self.training_step(model, inputs)
# loss.backward() already computed and loss returned detached.
if train_logits is None: # Keep track of training dynamics.
train_ids = train_ids_batch
train_logits = batch_logits[0].detach().cpu().numpy()
train_golds = inputs["labels"].detach().cpu().numpy()
# TODO: Check dimension of loss, also does it make sense to detach before optimization.
train_losses = tr_loss_step.cpu().numpy()
else:
train_ids = np.append(train_ids, train_ids_batch)
train_logits = np.append(train_logits, batch_logits[0].detach().cpu().numpy(), axis=0)
train_golds = np.append(train_golds, inputs["labels"].detach().cpu().numpy())
train_losses = np.append(train_losses, tr_loss_step.cpu().numpy())
if (
args.logging_nan_inf_filter
and not is_torch_tpu_available()
and (torch.isnan(tr_loss_step) or torch.isinf(tr_loss_step))
):
# if loss is nan or inf simply add the average of previous logged losses
tr_loss += tr_loss / (1 + self.state.global_step - self._globalstep_last_logged)
else:
tr_loss += tr_loss_step
self.current_flos += float(self.floating_point_ops(inputs))
# Optimizer step for deepspeed must be called on every step regardless of the value of gradient_accumulation_steps
if self.deepspeed:
self.deepspeed.step()
if (step + 1) % args.gradient_accumulation_steps == 0 or (
# last step in epoch but step is always smaller than gradient_accumulation_steps
steps_in_epoch <= args.gradient_accumulation_steps
and (step + 1) == steps_in_epoch
):
# Gradient clipping
if args.max_grad_norm is not None and args.max_grad_norm > 0 and not self.deepspeed:
# deepspeed does its own clipping
if self.do_grad_scaling:
# Reduce gradients first for XLA
if is_torch_tpu_available():
gradients = xm._fetch_gradients(self.optimizer)
xm.all_reduce("sum", gradients, scale=1.0 / xm.xrt_world_size())
# AMP: gradients need unscaling
self.scaler.unscale_(self.optimizer)
if hasattr(self.optimizer, "clip_grad_norm"):
# Some optimizers (like the sharded optimizer) have a specific way to do gradient clipping
self.optimizer.clip_grad_norm(args.max_grad_norm)
elif hasattr(model, "clip_grad_norm_"):
# Some models (like FullyShardedDDP) have a specific way to do gradient clipping
model.clip_grad_norm_(args.max_grad_norm)
else:
# Revert to normal clipping otherwise, handling Apex or full precision
nn.utils.clip_grad_norm_(
amp.master_params(self.optimizer) if self.use_apex else model.parameters(),
args.max_grad_norm,
)
# Optimizer step
optimizer_was_run = True
if self.deepspeed:
pass # called outside the loop
elif is_torch_tpu_available():
if self.do_grad_scaling:
self.scaler.step(self.optimizer)
self.scaler.update()
else:
xm.optimizer_step(self.optimizer)
elif self.do_grad_scaling:
scale_before = self.scaler.get_scale()
self.scaler.step(self.optimizer)
self.scaler.update()
scale_after = self.scaler.get_scale()
optimizer_was_run = scale_before <= scale_after
else:
self.optimizer.step()
if optimizer_was_run and not self.deepspeed:
self.lr_scheduler.step()
model.zero_grad()
self.state.global_step += 1
self.state.epoch = epoch + (step + 1) / steps_in_epoch
self.control = self.callback_handler.on_step_end(args, self.state, self.control)
# Just log, and save checkpoints, dont evaluate.
_ = self._maybe_log_save_evaluate(tr_loss, model, trial, epoch, ignore_keys_for_eval, evaluate=False)
if self.dro_args.is_robust and self.state.global_step % self.args.logging_steps == 0:
self.train_loss_computer.log_stats(logger, True)
self.log(self.train_loss_computer.get_stats(model, args))
iteration_list.append(step)
epoch_list.append(epoch)
group_assignment_list.append(list(self.train_loss_computer.adv_probs.cpu().numpy()))
group_loss_list.append(list(self.train_loss_computer.group_loss.detach().cpu().numpy()))
# there is a mismatch between Chunting's code where reset happens only after 1 epoch.
# self.train_loss_computer.reset_stats()
else:
self.control = self.callback_handler.on_substep_end(args, self.state, self.control)
if self.control.should_epoch_stop or self.control.should_training_stop:
break
# End of epoch, reset train loss computer.
if self.dro_args.is_robust and self.train_loss_computer.batch_count > 0:
self.train_loss_computer.log_stats(logger, True)
self.log(self.train_loss_computer.get_stats(model, args))
self.train_loss_computer.reset_stats()
"""
if self.dro_args.robust_algorithm == "GCDRO":
self._update_columns(epoch=epoch) #, dataloader=epoch_iterator)
# update epoch iterator, since instance weights are being changed in self.train_dataset
train_dataloader = self.get_train_dataloader()
if is_torch_tpu_available():
parallel_loader = pl.ParallelLoader(train_dataloader, [args.device]).per_device_loader(args.device)
epoch_iterator = parallel_loader
else:
epoch_iterator = train_dataloader
"""
if step < 0:
logger.warning(
f"There seems to be not a single sample in your epoch_iterator, stopping training at step"
f" {self.state.global_step}! This is expected if you're using an IterableDataset and set"
f" num_steps ({max_steps}) higher than the number of available samples."
)
self.control.should_training_stop = True
# Log training dynamics.
self.log_training_dynamics(output_dir=args.output_dir,
epoch=epoch,
train_ids=list(train_ids),
train_logits=list(train_logits),
train_golds=list(train_golds))
self.control = self.callback_handler.on_epoch_end(args, self.state, self.control)
# this is going to save but only after its worst accuracy has been computed.
metrics = self._maybe_log_save_evaluate(tr_loss, model, trial, epoch, ignore_keys_for_eval, evaluate=True)
# Training stopping criterion
become_better = False
if self.dro_args.is_robust and args.metric_for_best_model == "eval_worst_accuracy":
resplit_train_epoch += 1
# Worst alpha groups are used for model selection by default.
if self.args.select_mega_worst_group:
valid_group_acc = [(int(key.lstrip("eval_megagroup_accuracy_")), metrics[key]) for key in metrics.keys() if key.startswith("eval_megagroup_accuracy")]
else:
valid_group_acc = [(int(key.lstrip("eval_group_accuracy_")), metrics[key]) for key in metrics.keys() if key.startswith("eval_group_accuracy")]
curr_worst_valid_acc = min([acc for _, acc in valid_group_acc])
sorted_by_group_id = sorted(valid_group_acc, key=lambda tup: tup[0])
group_acc = " ".join(["%d: %.3f" % (idx, acc if acc > 0 else -acc) for idx, acc in sorted_by_group_id])
become_better = (worst_valid_acc is not None and curr_worst_valid_acc > worst_valid_acc) or worst_valid_acc is None
worst_valid_acc = curr_worst_valid_acc if worst_valid_acc is None else max(curr_worst_valid_acc, worst_valid_acc)
bad_counts = 0 if become_better else bad_counts + 1
logger.info("Valid group performance: {}".format(group_acc))
logger.info("Better worst valid = {}, bad counts = {}, worst acc = {}".format(become_better, bad_counts, curr_worst_valid_acc))
# Update metrics (best_worst_group)
metrics["eval_worst_accuracy"] = worst_valid_acc
else:
# Even with robust training, this code will get triggered.
current_valid_acc = metrics["eval_accuracy"]
become_better = (valid_acc is not None and current_valid_acc > valid_acc) or valid_acc is None
valid_acc = current_valid_acc if valid_acc is None else max(current_valid_acc, valid_acc)
bad_counts = 0 if become_better else bad_counts + 1
logger.info("Valid performance: {}".format(current_valid_acc))
logger.info("Better valid = {}, bad counts = {}, best acc = {}".format(become_better, bad_counts, current_valid_acc))
# Inner update criterion for GCDRO (every epoch or when worst accuracy drops (conservative), Chunting is using every epoch) : SKIP
# Early stopping criterion : Worst group has no changed for patience number of validations. Chunting uses default patience of -1, so no early stopping: SKIP
# Model selection (save checkpoint with best worst_accuracy as the "best_" checkpoint)
if become_better:
# First time worst_accuracy is computed, or worst accuracy improved.
self._save_checkpoint(model, trial, metrics=metrics, save_best=True)
if DebugOption.TPU_METRICS_DEBUG in self.args.debug:
if is_torch_tpu_available():
# tpu-comment: Logging debug metrics for PyTorch/XLA (compile, execute times, ops, etc.)
xm.master_print(met.metrics_report())
else:
logger.warning(
"You enabled PyTorch/XLA debug metrics but you don't have a TPU "
"configured. Check your training configuration if this is unexpected."
)
if self.control.should_training_stop:
break
# End of training
# Dump dro group assignments to file.
self.log_dro_dynamics(output_dir=args.output_dir, epochs=epoch_list, iterations=iteration_list, group_probs=group_assignment_list, group_losses=group_loss_list)
if args.past_index and hasattr(self, "_past"):
# Clean the state at the end of training
delattr(self, "_past")
logger.info("\n\nTraining completed. Do not forget to share your model on huggingface.co/models =)\n\n")
if args.load_best_model_at_end and self.state.best_model_checkpoint is not None:
# Wait for everyone to get here so we are sur the model has been saved by process 0.
if is_torch_tpu_available():
xm.rendezvous("load_best_model_at_end")
elif args.local_rank != -1:
dist.barrier()
logger.info(
f"Loading best model from {self.state.best_model_checkpoint} (score: {self.state.best_metric})."
)
best_model_path = os.path.join(self.state.best_model_checkpoint, WEIGHTS_NAME)
if os.path.exists(best_model_path):
if self.deepspeed:
# temp hack until Deepspeed fixes the problem with resume from an existing engine that did some stepping
deepspeed_engine, optimizer, lr_scheduler = deepspeed_reinit(self)
self.model = deepspeed_engine.module
self.model_wrapped = deepspeed_engine
self.deepspeed = deepspeed_engine
self.optimizer = optimizer
self.lr_scheduler = lr_scheduler
self.deepspeed.load_checkpoint(
self.state.best_model_checkpoint, load_optimizer_states=True, load_lr_scheduler_states=True
)
else:
# We load the model state dict on the CPU to avoid an OOM error.
state_dict = torch.load(best_model_path, map_location="cpu")
# If the model is on the GPU, it still works!
self._load_state_dict_in_model(state_dict)
else:
logger.warning(
f"Could not locate the best model at {best_model_path}, if you are running a distributed training "
"on multiple nodes, you should activate `--save_on_each_node`."
)
# add remaining tr_loss
self._total_loss_scalar += tr_loss.item()
train_loss = self._total_loss_scalar / self.state.global_step
metrics = speed_metrics("train", start_time, num_samples=num_train_samples, num_steps=self.state.max_steps)
self.store_flos()
metrics["total_flos"] = self.state.total_flos
metrics["train_loss"] = train_loss
self.is_in_train = False
self._memory_tracker.stop_and_update_metrics(metrics)
self.log(metrics)
self.control = self.callback_handler.on_train_end(args, self.state, self.control)
return TrainOutput(self.state.global_step, train_loss, metrics)
def _load_state_dict_in_model(self, state_dict):
load_result = self.model.load_state_dict(state_dict, strict=False)
if len(load_result.missing_keys) != 0:
if self.model._keys_to_ignore_on_save is not None and set(load_result.missing_keys) == set(
self.model._keys_to_ignore_on_save
):
self.model.tie_weights()
else:
logger.warning(f"There were missing keys in the checkpoint model loaded: {load_result.missing_keys}.")
if len(load_result.unexpected_keys) != 0:
logger.warning(
f"There were unexpected keys in the checkpoint model loaded: {load_result.unexpected_keys}."
)
def _maybe_log_save_evaluate(self, tr_loss, model, trial, epoch, ignore_keys_for_eval, evaluate=False):
if self.control.should_log:
if is_torch_tpu_available():
xm.mark_step()
logs: Dict[str, float] = {}
# all_gather + mean() to get average loss over all processes
tr_loss_scalar = self._nested_gather(tr_loss).mean().item()
# reset tr_loss to zero
tr_loss -= tr_loss
logs["loss"] = round(tr_loss_scalar / (self.state.global_step - self._globalstep_last_logged), 4)
logs["learning_rate"] = self._get_learning_rate()
self._total_loss_scalar += tr_loss_scalar
self._globalstep_last_logged = self.state.global_step
self.store_flos()
self.log(logs)
metrics = None
if evaluate: # and self.control.should_evaluate:
metrics = self.evaluate(ignore_keys=ignore_keys_for_eval)
self._report_to_hp_search(trial, epoch, metrics)
if self.control.should_save:
# may_log_and_save is called at the end of every epoch or after every iteration, and save_checkpoint is based on save_strategy.
# setting metrics to none so that metric_to_check is not evaluated.
self._save_checkpoint(model, trial, metrics=None)
self.control = self.callback_handler.on_save(self.args, self.state, self.control)
return metrics
def _save_checkpoint(self, model, trial, metrics=None, save_best=False):
# In all cases, including ddp/dp/deepspeed, self.model is always a reference to the model we
# want to save except FullyShardedDDP.
# assert unwrap_model(model) is self.model, "internal model should be a reference to self.model"
# Save model checkpoint
if save_best:
checkpoint_folder = f"best_checkpoint"
else:
checkpoint_folder = f"{PREFIX_CHECKPOINT_DIR}-{self.state.global_step}"
if self.hp_search_backend is not None and trial is not None:
if self.hp_search_backend == HPSearchBackend.OPTUNA:
run_id = trial.number
elif self.hp_search_backend == HPSearchBackend.RAY:
from ray import tune
run_id = tune.get_trial_id()
elif self.hp_search_backend == HPSearchBackend.SIGOPT:
run_id = trial.id
elif self.hp_search_backend == HPSearchBackend.WANDB:
import wandb
run_id = wandb.run.id
run_name = self.hp_name(trial) if self.hp_name is not None else f"run-{run_id}"
run_dir = os.path.join(self.args.output_dir, run_name)
else:
run_dir = self.args.output_dir
self.store_flos()
output_dir = os.path.join(run_dir, checkpoint_folder)
self.save_model(output_dir, _internal_call=True)
if self.deepspeed:
# under zero3 model file itself doesn't get saved since it's bogus! Unless deepspeed
# config `stage3_gather_fp16_weights_on_model_save` is True
self.deepspeed.save_checkpoint(output_dir)
# Save optimizer and scheduler
if self.sharded_ddp == ShardedDDPOption.SIMPLE:
self.optimizer.consolidate_state_dict()
if is_torch_tpu_available():
xm.rendezvous("saving_optimizer_states")
xm.save(self.optimizer.state_dict(), os.path.join(output_dir, OPTIMIZER_NAME))
with warnings.catch_warnings(record=True) as caught_warnings:
xm.save(self.lr_scheduler.state_dict(), os.path.join(output_dir, SCHEDULER_NAME))
reissue_pt_warnings(caught_warnings)
elif is_sagemaker_mp_enabled():
if smp.rdp_rank() == 0:
# Consolidate the state dict on all processed of rdp_rank 0
opt_state_dict = self.optimizer.state_dict()
# Save it and the scheduler on the main process
if self.args.should_save:
torch.save(opt_state_dict, os.path.join(output_dir, OPTIMIZER_NAME))
with warnings.catch_warnings(record=True) as caught_warnings:
torch.save(self.lr_scheduler.state_dict(), os.path.join(output_dir, SCHEDULER_NAME))
reissue_pt_warnings(caught_warnings)
if self.do_grad_scaling:
torch.save(self.scaler.state_dict(), os.path.join(output_dir, SCALER_NAME))
elif self.args.should_save and not self.deepspeed:
# deepspeed.save_checkpoint above saves model/optim/sched
torch.save(self.optimizer.state_dict(), os.path.join(output_dir, OPTIMIZER_NAME))
with warnings.catch_warnings(record=True) as caught_warnings:
torch.save(self.lr_scheduler.state_dict(), os.path.join(output_dir, SCHEDULER_NAME))
reissue_pt_warnings(caught_warnings)
if self.do_grad_scaling:
torch.save(self.scaler.state_dict(), os.path.join(output_dir, SCALER_NAME))
# Determine the new best metric / best model checkpoint
if metrics is not None and self.args.metric_for_best_model is not None:
metric_to_check = self.args.metric_for_best_model
if not metric_to_check.startswith("eval_"):
metric_to_check = f"eval_{metric_to_check}"
metric_value = metrics[metric_to_check]
operator = np.greater if self.args.greater_is_better else np.less
if (
self.state.best_metric is None
or self.state.best_model_checkpoint is None
or operator(metric_value, self.state.best_metric)
):
self.state.best_metric = metric_value
self.state.best_model_checkpoint = output_dir
# Save the Trainer state
if self.args.should_save:
self.state.save_to_json(os.path.join(output_dir, TRAINER_STATE_NAME))
# Save RNG state in non-distributed training
rng_states = {
"python": random.getstate(),
"numpy": np.random.get_state(),
"cpu": torch.random.get_rng_state(),
}
if torch.cuda.is_available():
if self.args.local_rank == -1:
# In non distributed, we save the global CUDA RNG state (will take care of DataParallel)
rng_states["cuda"] = torch.cuda.random.get_rng_state_all()
else:
rng_states["cuda"] = torch.cuda.random.get_rng_state()
if is_torch_tpu_available():
rng_states["xla"] = xm.get_rng_state()
# A process can arrive here before the process 0 has a chance to save the model, in which case output_dir may
# not yet exist.
os.makedirs(output_dir, exist_ok=True)
local_rank = xm.get_local_ordinal() if is_torch_tpu_available() else self.args.local_rank
if local_rank == -1:
torch.save(rng_states, os.path.join(output_dir, "rng_state.pth"))
else:
torch.save(rng_states, os.path.join(output_dir, f"rng_state_{local_rank}.pth"))
# Maybe delete some older checkpoints.
if self.args.should_save:
self._rotate_checkpoints(use_mtime=True, output_dir=run_dir)
def training_step(self, model: nn.Module, inputs: Dict[str, Union[torch.Tensor, Any]]) -> torch.Tensor:
"""
Perform a training step on a batch of inputs.
Subclass and override to inject custom behavior.
Args:
model (`nn.Module`):
The model to train.
inputs (`Dict[str, Union[torch.Tensor, Any]]`):
The inputs and targets of the model.
The dictionary will be unpacked before being fed to the model. Most models expect the targets under the
argument `labels`. Check your model's documentation for all accepted arguments.
Return:
`torch.Tensor`: The tensor with training loss on this batch.
"""
model.train()
inputs = self._prepare_inputs(inputs)
if is_sagemaker_mp_enabled():
scaler = self.scaler if self.do_grad_scaling else None
loss_mb = smp_forward_backward(model, inputs, self.args.gradient_accumulation_steps, scaler=scaler)
return loss_mb.reduce_mean().detach().to(self.args.device)
with self.autocast_smart_context_manager():
groups = inputs["group"]
group_distributions = inputs.get("group_distribution", None)
instance_weights = inputs.get("instance_weight", None)
del inputs["group"]
if group_distributions is not None:
del inputs["group_distribution"]
if instance_weights is not None:
del inputs["instance_weight"]
loss, outputs = self.compute_loss(model, inputs, return_outputs=True) #return outputs in addition to loss, to record logits.
# loss on inividual elements of batch
if self.dro_args.is_robust:
y = inputs["labels"]
yhat = outputs[1]
if torch.isnan(loss).any():
import pdb; pdb.set_trace()
loss = self.train_loss_computer.loss(loss, yhat, y, groups, group_distributions, instance_weights, is_training=True)
else:
loss = loss.mean() # reduce the loss here.
# Find logits and labels.
#TODO: During prediction, loss and outputs are returned, and loss variable is detached from the computational graph.
if isinstance(outputs, dict):
logits = tuple(v for k, v in outputs.items() if k not in ["loss"])
else:
logits = outputs[1:]
if self.args.n_gpu > 1:
loss = loss.mean() # mean() to average on multi-gpu parallel training
if self.args.gradient_accumulation_steps > 1 and not self.deepspeed:
# deepspeed handles loss scaling by gradient_accumulation_steps in its `backward`
loss = loss / self.args.gradient_accumulation_steps
if self.do_grad_scaling:
self.scaler.scale(loss).backward()
elif self.use_apex:
with amp.scale_loss(loss, self.optimizer) as scaled_loss:
scaled_loss.backward()
elif self.deepspeed:
# loss gets scaled under gradient_accumulation_steps in deepspeed
loss = self.deepspeed.backward(loss)
else:
loss.backward()
return loss.detach(), logits
def compute_loss(self, model, inputs, return_outputs=False):
"""
How the loss is computed by Trainer. By default, all models return the loss in the first element.
Subclass and override for custom behavior.
"""
del inputs["guid"]
if self.label_smoother is not None and "labels" in inputs:
labels = inputs.pop("labels")
else:
labels = None
outputs = model(**inputs)
# loss should not be reduced.
# handle loss computation across GPUs.
# Save past state if it exists
# TODO: this needs to be fixed and made cleaner later.
if self.args.past_index >= 0:
self._past = outputs[self.args.past_index]
if labels is not None:
loss = self.label_smoother(outputs, labels)
else:
# We don't use .loss here since the model may return tuples instead of ModelOutput.
loss = outputs["loss"] if isinstance(outputs, dict) else outputs[0]
return (loss, outputs) if return_outputs else loss
def save_model(self, output_dir: Optional[str] = None, _internal_call: bool = False):
"""
Will save the model, so you can reload it using `from_pretrained()`.
Will only save from the main process.
"""
if output_dir is None:
output_dir = self.args.output_dir
if is_torch_tpu_available():
self._save_tpu(output_dir)
elif is_sagemaker_mp_enabled():
# Calling the state_dict needs to be done on the wrapped model and on all processes.
state_dict = self.model_wrapped.state_dict()
if self.args.should_save:
self._save(output_dir, state_dict=state_dict)
elif (
ShardedDDPOption.ZERO_DP_2 in self.args.sharded_ddp or ShardedDDPOption.ZERO_DP_3 in self.args.sharded_ddp
):
state_dict = self.model.state_dict()
if self.args.should_save:
self._save(output_dir, state_dict=state_dict)
elif self.deepspeed:
# this takes care of everything as long as we aren't under zero3
if self.args.should_save:
self._save(output_dir)
if is_deepspeed_zero3_enabled():
# It's too complicated to try to override different places where the weights dump gets
# saved, so since under zero3 the file is bogus, simply delete it. The user should
# either user deepspeed checkpoint to resume or to recover full weights use
# zero_to_fp32.py stored in the checkpoint.
if self.args.should_save:
file = os.path.join(output_dir, WEIGHTS_NAME)
if os.path.isfile(file):
# logger.info(f"deepspeed zero3: removing {file}, see zero_to_fp32.py to recover weights")
os.remove(file)
# now save the real model if stage3_gather_fp16_weights_on_model_save=True
# if false it will not be saved.
# This must be called on all ranks
if not self.deepspeed.save_fp16_model(output_dir, WEIGHTS_NAME):
logger.warning(
"deepspeed.save_fp16_model didn't save the model, since stage3_gather_fp16_weights_on_model_save=false. "
"Saving the full checkpoint instead, use zero_to_fp32.py to recover weights"
)
self.deepspeed.save_checkpoint(output_dir)
elif self.args.should_save:
self._save(output_dir)
def _sorted_checkpoints(
self, output_dir=None, checkpoint_prefix=PREFIX_CHECKPOINT_DIR, use_mtime=False
) -> List[str]:
ordering_and_checkpoint_path = []
glob_checkpoints = [str(x) for x in Path(output_dir).glob(f"{checkpoint_prefix}-*")]
for path in glob_checkpoints:
if use_mtime:
ordering_and_checkpoint_path.append((os.path.getmtime(path), path))
else:
regex_match = re.match(f".*{checkpoint_prefix}-([0-9]+)", path)
if regex_match is not None and regex_match.groups() is not None:
ordering_and_checkpoint_path.append((int(regex_match.groups()[0]), path))
checkpoints_sorted = sorted(ordering_and_checkpoint_path)
checkpoints_sorted = [checkpoint[1] for checkpoint in checkpoints_sorted]
# Make sure we don't delete the best model.
if self.state.best_model_checkpoint is not None:
if "best" in self.state.best_model_checkpoint:
# no need to remove any checkpoint from list, since best checkpoint is being explicitly saved.
return checkpoints_sorted
best_model_index = checkpoints_sorted.index(str(Path(self.state.best_model_checkpoint)))
for i in range(best_model_index, len(checkpoints_sorted) - 2):
checkpoints_sorted[i], checkpoints_sorted[i + 1] = checkpoints_sorted[i + 1], checkpoints_sorted[i]
return checkpoints_sorted
def evaluate(
self,
eval_dataset: Optional[Dataset] = None,
ignore_keys: Optional[List[str]] = None,
metric_key_prefix: str = "eval",
) -> Dict[str, float]:
"""
Run evaluation and returns metrics.
The calling script will be responsible for providing a method to compute metrics, as they are task-dependent
(pass it to the init `compute_metrics` argument).
You can also subclass and override this method to inject custom behavior.
Args:
eval_dataset (`Dataset`, *optional*):
Pass a dataset if you wish to override `self.eval_dataset`. If it is an `datasets.Dataset`, columns not
accepted by the `model.forward()` method are automatically removed. It must implement the `__len__`
method.
ignore_keys (`Lst[str]`, *optional*):
A list of keys in the output of your model (if it is a dictionary) that should be ignored when
gathering predictions.
metric_key_prefix (`str`, *optional*, defaults to `"eval"`):
An optional prefix to be used as the metrics key prefix. For example the metrics "bleu" will be named
"eval_bleu" if the prefix is "eval" (default)
Returns:
A dictionary containing the evaluation loss and the potential metrics computed from the predictions. The
dictionary also contains the epoch number which comes from the training state.
"""
# memory metrics - must set up as early as possible
self._memory_tracker.start()
eval_dataloader = self.get_eval_dataloader(self.eval_dataset)
start_time = time.time()
# Declare an evaluation loss computer object.
if self.dro_args.is_robust:
if not self.dro_args.use_group_weights:
group_list = [ex["group"] for ex in self.eval_dataset]
unique_groups, group_counts = np.unique(group_list, return_counts=True)
n_groups = len(unique_groups)
group_counts = torch.LongTensor(group_counts)
else:
group_distributions = np.asarray([ex["group_distribution"] for ex in self.eval_dataset])
group_list = np.argmax(group_distributions, axis=1)
unique_groups, group_counts = np.unique(group_list, return_counts=True)
n_groups = len(unique_groups)
group_counts = torch.LongTensor(group_counts)
self.val_loss_computer = LossComputer(
dro_args=self.dro_args,
training_args=self.args,
# dataset=dataset['train_data'], ## Why is this needed? to compute n_groups, group_counts which are passed as arguments now.
n_groups=n_groups,
group_counts=group_counts)
# adj=adjustments)
eval_loop = self.prediction_loop if self.args.use_legacy_prediction_loop else self.evaluation_loop
output = eval_loop(
eval_dataloader,
description="Evaluation",
# No point gathering the predictions if there are no metrics, otherwise we defer to
# self.args.prediction_loss_only
prediction_loss_only=True if self.compute_metrics is None else None,
ignore_keys=ignore_keys,
metric_key_prefix=metric_key_prefix,
)
# Print stats after evaluation loop complete.
# if self.dro_args.is_robust:
# self.val_loss_computer.log_stats(logger, True)
# self.log(self.val_loss_computer.get_stats(self.model, self.args))
if self.dro_args.is_robust and self.dro_args.automatic_adjustment:
gen_gap = self.val_loss_computer.avg_group_loss - self.train_loss_computer.exp_avg_loss
adjustments = gen_gap * torch.sqrt(self.train_loss_computer.group_counts)
self.train_loss_computer.adj = adjustments
logger.info('Adjustments updated\n')
for group_idx in range(self.train_loss_computer.n_groups):
logger.info(
f' {group_idx}:\t'
f'adj = {self.train_loss_computer.adj[group_idx]:.3f}\n')
total_batch_size = self.args.eval_batch_size * self.args.world_size
output.metrics.update(
speed_metrics(
metric_key_prefix,
start_time,
num_samples=output.num_samples,
num_steps=math.ceil(output.num_samples / total_batch_size),
)
)
self.log(output.metrics)
if DebugOption.TPU_METRICS_DEBUG in self.args.debug:
# tpu-comment: Logging debug metrics for PyTorch/XLA (compile, execute times, ops, etc.)
xm.master_print(met.metrics_report())
self.control = self.callback_handler.on_evaluate(self.args, self.state, self.control, output.metrics)
self._memory_tracker.stop_and_update_metrics(output.metrics)
return output.metrics
def predict(
self, test_dataset: Dataset, ignore_keys: Optional[List[str]] = None, metric_key_prefix: str = "test"
) -> PredictionOutput:
"""
Run prediction and returns predictions and potential metrics.
Depending on the dataset and your use case, your test dataset may contain labels. In that case, this method
will also return metrics, like in `evaluate()`.
Args:
test_dataset (`Dataset`):
Dataset to run the predictions on. If it is an `datasets.Dataset`, columns not accepted by the
`model.forward()` method are automatically removed. Has to implement the method `__len__`
ignore_keys (`Lst[str]`, *optional*):
A list of keys in the output of your model (if it is a dictionary) that should be ignored when
gathering predictions.
metric_key_prefix (`str`, *optional*, defaults to `"test"`):
An optional prefix to be used as the metrics key prefix. For example the metrics "bleu" will be named
"test_bleu" if the prefix is "test" (default)
<Tip>
If your predictions or labels have different sequence length (for instance because you're doing dynamic padding
in a token classification task) the predictions will be padded (on the right) to allow for concatenation into
one array. The padding index is -100.
</Tip>
Returns: *NamedTuple* A namedtuple with the following keys:
- predictions (`np.ndarray`): The predictions on `test_dataset`.
- label_ids (`np.ndarray`, *optional*): The labels (if the dataset contained some).
- metrics (`Dict[str, float]`, *optional*): The potential dictionary of metrics (if the dataset contained
labels).
"""
# memory metrics - must set up as early as possible
self._memory_tracker.start()
test_dataloader = self.get_test_dataloader(test_dataset)
start_time = time.time()
eval_loop = self.prediction_loop if self.args.use_legacy_prediction_loop else self.evaluation_loop
output = eval_loop(
test_dataloader, description="Prediction", ignore_keys=ignore_keys, metric_key_prefix=metric_key_prefix
)
total_batch_size = self.args.eval_batch_size * self.args.world_size
output.metrics.update(
speed_metrics(
metric_key_prefix,
start_time,
num_samples=output.num_samples,
num_steps=math.ceil(output.num_samples / total_batch_size),
)
)
self._memory_tracker.stop_and_update_metrics(output.metrics)
return PredictionOutput(predictions=output.predictions, label_ids=output.label_ids, metrics=output.metrics)
def evaluation_loop(
self,
dataloader: DataLoader,
description: str,
prediction_loss_only: Optional[bool] = None,
ignore_keys: Optional[List[str]] = None,
metric_key_prefix: str = "eval",
) -> EvalLoopOutput:
"""
Prediction/evaluation loop, shared by `Trainer.evaluate()` and `Trainer.predict()`.
Works both with or without labels.
"""
args = self.args
prediction_loss_only = prediction_loss_only if prediction_loss_only is not None else args.prediction_loss_only
# if eval is called w/o train init deepspeed here
if args.deepspeed and not self.deepspeed:
# XXX: eval doesn't have `resume_from_checkpoint` arg but we should be able to do eval
# from the checkpoint eventually
deepspeed_engine, _, _ = deepspeed_init(
self, num_training_steps=0, resume_from_checkpoint=None, inference=True
)
self.model = deepspeed_engine.module
self.model_wrapped = deepspeed_engine
self.deepspeed = deepspeed_engine
model = self._wrap_model(self.model, training=False)
# if full fp16 or bf16 eval is wanted and this ``evaluation`` or ``predict`` isn't called
# while ``train`` is running, cast it to the right dtype first and then put on device
if not self.is_in_train:
if args.fp16_full_eval:
model = model.to(dtype=torch.float16, device=args.device)
elif args.bf16_full_eval:
model = model.to(dtype=torch.bfloat16, device=args.device)
batch_size = dataloader.batch_size
logger.info(f"***** Running {description} *****")
if has_length(dataloader.dataset):
logger.info(f" Num examples = {self.num_examples(dataloader)}")
else:
logger.info(" Num examples: Unknown")
logger.info(f" Batch size = {batch_size}")
model.eval()
self.callback_handler.eval_dataloader = dataloader
# Do this before wrapping.
eval_dataset = dataloader.dataset
if is_torch_tpu_available():
dataloader = pl.ParallelLoader(dataloader, [args.device]).per_device_loader(args.device)
if args.past_index >= 0:
self._past = None
# Initialize containers
# losses/preds/labels on GPU/TPU (accumulated for eval_accumulation_steps)
losses_host = None
preds_host = None
labels_host = None
# losses/preds/labels on CPU (final containers)
all_losses = None
all_preds = None
all_labels = None
# Will be useful when we have an iterable dataset so don't know its length.
observed_num_examples = 0
# Main evaluation loop
for step, inputs in enumerate(dataloader):
# Update the observed num examples
observed_batch_size = find_batch_size(inputs)
if observed_batch_size is not None:
observed_num_examples += observed_batch_size
# For batch samplers, batch_size is not known by the dataloader in advance.
if batch_size is None:
batch_size = observed_batch_size
# Prediction step
# TODO(bparan): Inputs needs to be stripped of non-tensor metadata to be sent to model forward function.
# Metadata information can be used to either log model performance, or provide group information.
# del inputs["guid"]
loss, logits, labels = self.prediction_step(model, inputs, prediction_loss_only, ignore_keys=ignore_keys)
if is_torch_tpu_available():
xm.mark_step()
# Update containers on host
if loss is not None:
losses = self._nested_gather(loss.repeat(batch_size))
losses_host = losses if losses_host is None else torch.cat((losses_host, losses), dim=0)
if labels is not None:
labels = self._pad_across_processes(labels)
labels = self._nested_gather(labels)
labels_host = labels if labels_host is None else nested_concat(labels_host, labels, padding_index=-100)
if logits is not None:
logits = self._pad_across_processes(logits)
logits = self._nested_gather(logits)
if self.preprocess_logits_for_metrics is not None:
logits = self.preprocess_logits_for_metrics(logits, labels)
preds_host = logits if preds_host is None else nested_concat(preds_host, logits, padding_index=-100)
self.control = self.callback_handler.on_prediction_step(args, self.state, self.control)
# Gather all tensors and put them back on the CPU if we have done enough accumulation steps.
if args.eval_accumulation_steps is not None and (step + 1) % args.eval_accumulation_steps == 0:
if losses_host is not None:
losses = nested_numpify(losses_host)
all_losses = losses if all_losses is None else np.concatenate((all_losses, losses), axis=0)
if preds_host is not None:
logits = nested_numpify(preds_host)
all_preds = logits if all_preds is None else nested_concat(all_preds, logits, padding_index=-100)
if labels_host is not None:
labels = nested_numpify(labels_host)
all_labels = (
labels if all_labels is None else nested_concat(all_labels, labels, padding_index=-100)
)
# Set back to None to begin a new accumulation
losses_host, preds_host, labels_host = None, None, None
if args.past_index and hasattr(self, "_past"):
# Clean the state at the end of the evaluation loop
delattr(self, "_past")
# Gather all remaining tensors and put them back on the CPU
if losses_host is not None:
losses = nested_numpify(losses_host)
all_losses = losses if all_losses is None else np.concatenate((all_losses, losses), axis=0)
if preds_host is not None:
logits = nested_numpify(preds_host)
all_preds = logits if all_preds is None else nested_concat(all_preds, logits, padding_index=-100)
if labels_host is not None:
labels = nested_numpify(labels_host)
all_labels = labels if all_labels is None else nested_concat(all_labels, labels, padding_index=-100)
# Number of samples
if has_length(eval_dataset):
num_samples = len(eval_dataset)
# The instance check is weird and does not actually check for the type, but whether the dataset has the right
# methods. Therefore we need to make sure it also has the attribute.
elif isinstance(eval_dataset, IterableDatasetShard) and hasattr(eval_dataset, "num_examples"):
num_samples = eval_dataset.num_examples
else:
num_samples = observed_num_examples
# Number of losses has been rounded to a multiple of batch_size and in a distributed training, the number of
# samplers has been rounded to a multiple of batch_size, so we truncate.
if all_losses is not None:
all_losses = all_losses[:num_samples]
if all_preds is not None:
all_preds = nested_truncate(all_preds, num_samples)
if all_labels is not None:
all_labels = nested_truncate(all_labels, num_samples)
# Metrics!
if self.compute_metrics is not None and all_preds is not None and all_labels is not None:
metrics = self.compute_metrics(EvalPrediction(predictions=all_preds, label_ids=all_labels))
else:
metrics = {}
# Compute Worst Group Metrics, if group information is evailable in the evaluation set.
if hasattr(self, "val_loss_computer"):
n_eval_groups = self.val_loss_computer.n_groups
key = "accuracy"
pred = self._prepare_input(torch.tensor((np.argmax(all_preds,1)==all_labels), dtype=torch.float32))
groups = self._prepare_input(torch.tensor([ex["group"] for ex in self.eval_dataset]))
group_acc = self.val_loss_computer.compute_group_avg(pred, groups)[0]
for group_idx in range(n_eval_groups):
metrics[f"group_{key}_{group_idx}"] = group_acc[group_idx].item()
# group_acc = self.val_loss_computer.avg_group_acc
top_worst_groups = torch.argsort(group_acc)[:int(len(group_acc) * self.dro_args.alpha)].cpu().numpy()
mega_groups = self._prepare_input(torch.tensor([(0 if group.item() in top_worst_groups else 1) for group in groups]))
mega_group_map = (mega_groups == self._prepare_input(torch.arange(2).unsqueeze(1).long())).float()
mega_group_count = mega_group_map.sum(1)
mega_group_denom = mega_group_count + (mega_group_count==0).float() # avoid nans
mega_group_acc = (mega_group_map @ pred.view(-1))/mega_group_denom
for group_idx in range(2):
metrics[f"megagroup_{key}_{group_idx}"] = mega_group_acc[group_idx].item()
# To be JSON-serializable, we need to remove numpy types or zero-d tensors
metrics = denumpify_detensorize(metrics)
if all_losses is not None:
metrics[f"{metric_key_prefix}_loss"] = all_losses.mean().item()
# Prefix all keys with metric_key_prefix + '_'
for key in list(metrics.keys()):
if not key.startswith(f"{metric_key_prefix}_"):
metrics[f"{metric_key_prefix}_{key}"] = metrics.pop(key)
return EvalLoopOutput(predictions=all_preds, label_ids=all_labels, metrics=metrics, num_samples=num_samples)
def prediction_step(
self,
model: nn.Module,
inputs: Dict[str, Union[torch.Tensor, Any]],
prediction_loss_only: bool,
ignore_keys: Optional[List[str]] = None,
) -> Tuple[Optional[torch.Tensor], Optional[torch.Tensor], Optional[torch.Tensor]]:
"""
Perform an evaluation step on `model` using `inputs`.
Subclass and override to inject custom behavior.
Args:
model (`nn.Module`):
The model to evaluate.
inputs (`Dict[str, Union[torch.Tensor, Any]]`):
The inputs and targets of the model.
The dictionary will be unpacked before being fed to the model. Most models expect the targets under the
argument `labels`. Check your model's documentation for all accepted arguments.
prediction_loss_only (`bool`):
Whether or not to return the loss only.
ignore_keys (`Lst[str]`, *optional*):
A list of keys in the output of your model (if it is a dictionary) that should be ignored when
gathering predictions.
Return:
Tuple[Optional[torch.Tensor], Optional[torch.Tensor], Optional[torch.Tensor]]: A tuple with the loss,
logits and labels (each being optional).
"""
has_labels = all(inputs.get(k) is not None for k in self.label_names)
inputs = self._prepare_inputs(inputs)
if ignore_keys is None:
if hasattr(self.model, "config"):
ignore_keys = getattr(self.model.config, "keys_to_ignore_at_inference", [])
else:
ignore_keys = []
# labels may be popped when computing the loss (label smoothing for instance) so we grab them first.
if has_labels:
labels = nested_detach(tuple(inputs.get(name) for name in self.label_names))
if len(labels) == 1:
labels = labels[0]
else:
labels = None
with torch.no_grad():
if is_sagemaker_mp_enabled():
raw_outputs = smp_forward_only(model, inputs)
if has_labels:
if isinstance(raw_outputs, dict):
loss_mb = raw_outputs["loss"]
logits_mb = tuple(v for k, v in raw_outputs.items() if k not in ignore_keys + ["loss"])
else:
loss_mb = raw_outputs[0]
logits_mb = raw_outputs[1:]
loss = loss_mb.reduce_mean().detach().cpu()
logits = smp_nested_concat(logits_mb)
else:
loss = None
if isinstance(raw_outputs, dict):
logits_mb = tuple(v for k, v in raw_outputs.items() if k not in ignore_keys)
else:
logits_mb = raw_outputs
logits = smp_nested_concat(logits_mb)
else:
if has_labels:
with self.autocast_smart_context_manager():
groups = inputs["group"]
group_distributions = inputs.get("group_distribution", None)
instance_weights = inputs.get("instance_weight", None)
del inputs["group"]
if group_distributions is not None:
del inputs["group_distribution"]
if instance_weights is not None:
del inputs["instance_weight"]
loss, outputs = self.compute_loss(model, inputs, return_outputs=True)
# loss on inividual elements of batch
if self.dro_args.is_robust:
y = inputs["labels"]
yhat = outputs[1]
if torch.isnan(loss).any():
import pdb; pdb.set_trace()
loss = self.val_loss_computer.loss(loss, yhat, y, groups, group_distributions, is_training=True)
else:
loss = loss.mean() # reduce the loss here.
loss = loss.mean().detach()
if isinstance(outputs, dict):
logits = tuple(v for k, v in outputs.items() if k not in ignore_keys + ["loss"])
else:
logits = outputs[1:]
else:
loss = None
with self.autocast_smart_context_manager():
#TODO: Remove non-tensorizable elements from inputs.
del inputs["guid"]
del inputs["group"]
if self.dro_args.use_group_weights or "group_distribution" in inputs:
del inputs["group_distribution"]
if "instance_weight" in inputs:
del inputs["instance_weight"]
outputs = model(**inputs)
if isinstance(outputs, dict):
logits = tuple(v for k, v in outputs.items() if k not in ignore_keys)
else:
logits = outputs
# TODO: this needs to be fixed and made cleaner later.
if self.args.past_index >= 0:
self._past = outputs[self.args.past_index - 1]
if prediction_loss_only:
return (loss, None, None)
logits = nested_detach(logits)
if len(logits) == 1:
logits = logits[0]
return (loss, logits, labels)
| 104,956 | 46.816401 | 170 | py |
robust-transformers | robust-transformers-main/src/transformers/configuration_utils.py | # coding=utf-8
# Copyright 2018 The Google AI Language Team Authors and The HuggingFace Inc. team.
# Copyright (c) 2018, NVIDIA CORPORATION. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
""" Configuration base class and utilities."""
import copy
import json
import os
import re
import warnings
from typing import Any, Dict, List, Optional, Tuple, Union
from packaging import version
from requests import HTTPError
from . import __version__
from .dynamic_module_utils import custom_object_save
from .file_utils import (
CONFIG_NAME,
EntryNotFoundError,
PushToHubMixin,
RepositoryNotFoundError,
RevisionNotFoundError,
cached_path,
copy_func,
hf_bucket_url,
is_offline_mode,
is_remote_url,
is_torch_available,
)
from .utils import logging
logger = logging.get_logger(__name__)
_re_configuration_file = re.compile(r"config\.(.*)\.json")
class PretrainedConfig(PushToHubMixin):
r"""
Base class for all configuration classes. Handles a few parameters common to all models' configurations as well as
methods for loading/downloading/saving configurations.
<Tip>
A configuration file can be loaded and saved to disk. Loading the configuration file and using this file to
initialize a model does **not** load the model weights. It only affects the model's configuration.
</Tip>
Class attributes (overridden by derived classes):
- **model_type** (`str`) -- An identifier for the model type, serialized into the JSON file, and used to recreate
the correct object in [`~transformers.AutoConfig`].
- **is_composition** (`bool`) -- Whether the config class is composed of multiple sub-configs. In this case the
config has to be initialized from two or more configs of type [`~transformers.PretrainedConfig`] like:
[`~transformers.EncoderDecoderConfig`] or [`~RagConfig`].
- **keys_to_ignore_at_inference** (`List[str]`) -- A list of keys to ignore by default when looking at dictionary
outputs of the model during inference.
- **attribute_map** (`Dict[str, str]`) -- A dict that maps model specific attribute names to the standardized
naming of attributes.
Common attributes (present in all subclasses):
- **vocab_size** (`int`) -- The number of tokens in the vocabulary, which is also the first dimension of the
embeddings matrix (this attribute may be missing for models that don't have a text modality like ViT).
- **hidden_size** (`int`) -- The hidden size of the model.
- **num_attention_heads** (`int`) -- The number of attention heads used in the multi-head attention layers of the
model.
- **num_hidden_layers** (`int`) -- The number of blocks in the model.
Arg:
name_or_path (`str`, *optional*, defaults to `""`):
Store the string that was passed to [`PreTrainedModel.from_pretrained`] or
[`TFPreTrainedModel.from_pretrained`] as `pretrained_model_name_or_path` if the configuration was created
with such a method.
output_hidden_states (`bool`, *optional*, defaults to `False`):
Whether or not the model should return all hidden-states.
output_attentions (`bool`, *optional*, defaults to `False`):
Whether or not the model should returns all attentions.
return_dict (`bool`, *optional*, defaults to `True`):
Whether or not the model should return a [`~transformers.file_utils.ModelOutput`] instead of a plain tuple.
is_encoder_decoder (`bool`, *optional*, defaults to `False`):
Whether the model is used as an encoder/decoder or not.
is_decoder (`bool`, *optional*, defaults to `False`):
Whether the model is used as decoder or not (in which case it's used as an encoder).
cross_attention_hidden_size** (`bool`, *optional*):
The hidden size of the cross-attention layer in case the model is used as a decoder in an encoder-decoder
setting and the cross-attention hidden dimension differs from `self.config.hidden_size`.
add_cross_attention (`bool`, *optional*, defaults to `False`):
Whether cross-attention layers should be added to the model. Note, this option is only relevant for models
that can be used as decoder models within the [`EncoderDecoderModel`] class, which consists of all models
in `AUTO_MODELS_FOR_CAUSAL_LM`.
tie_encoder_decoder (`bool`, *optional*, defaults to `False`):
Whether all encoder weights should be tied to their equivalent decoder weights. This requires the encoder
and decoder model to have the exact same parameter names.
prune_heads (`Dict[int, List[int]]`, *optional*, defaults to `{}`):
Pruned heads of the model. The keys are the selected layer indices and the associated values, the list of
heads to prune in said layer.
For instance `{1: [0, 2], 2: [2, 3]}` will prune heads 0 and 2 on layer 1 and heads 2 and 3 on layer 2.
chunk_size_feed_forward (`int`, *optional*, defaults to `0`):
The chunk size of all feed forward layers in the residual attention blocks. A chunk size of `0` means that
the feed forward layer is not chunked. A chunk size of n means that the feed forward layer processes `n` <
sequence_length embeddings at a time. For more information on feed forward chunking, see [How does Feed
Forward Chunking work?](../glossary.html#feed-forward-chunking).
> Parameters for sequence generation
max_length (`int`, *optional*, defaults to 20):
Maximum length that will be used by default in the `generate` method of the model.
min_length (`int`, *optional*, defaults to 10):
Minimum length that will be used by default in the `generate` method of the model.
do_sample (`bool`, *optional*, defaults to `False`):
Flag that will be used by default in the `generate` method of the model. Whether or not to use sampling ;
use greedy decoding otherwise.
early_stopping (`bool`, *optional*, defaults to `False`):
Flag that will be used by default in the `generate` method of the model. Whether to stop the beam search
when at least `num_beams` sentences are finished per batch or not.
num_beams (`int`, *optional*, defaults to 1):
Number of beams for beam search that will be used by default in the `generate` method of the model. 1 means
no beam search.
num_beam_groups (`int`, *optional*, defaults to 1):
Number of groups to divide `num_beams` into in order to ensure diversity among different groups of beams
that will be used by default in the `generate` method of the model. 1 means no group beam search.
diversity_penalty (`float`, *optional*, defaults to 0.0):
Value to control diversity for group beam search. that will be used by default in the `generate` method of
the model. 0 means no diversity penalty. The higher the penalty, the more diverse are the outputs.
temperature (`float`, *optional*, defaults to 1):
The value used to module the next token probabilities that will be used by default in the `generate` method
of the model. Must be strictly positive.
top_k (`int`, *optional*, defaults to 50):
Number of highest probability vocabulary tokens to keep for top-k-filtering that will be used by default in
the `generate` method of the model.
top_p (`float`, *optional*, defaults to 1):
Value that will be used by default in the `generate` method of the model for `top_p`. If set to float < 1,
only the most probable tokens with probabilities that add up to `top_p` or higher are kept for generation.
repetition_penalty (`float`, *optional*, defaults to 1):
Parameter for repetition penalty that will be used by default in the `generate` method of the model. 1.0
means no penalty.
length_penalty (`float`, *optional*, defaults to 1):
Exponential penalty to the length that will be used by default in the `generate` method of the model.
no_repeat_ngram_size (`int`, *optional*, defaults to 0) -- Value that will be used by default in the
`generate` method of the model for `no_repeat_ngram_size`. If set to int > 0, all ngrams of that size can
only occur once.
encoder_no_repeat_ngram_size (`int`, *optional*, defaults to 0) -- Value that will be used by
default in the `generate` method of the model for `encoder_no_repeat_ngram_size`. If set to int > 0, all
ngrams of that size that occur in the `encoder_input_ids` cannot occur in the `decoder_input_ids`.
bad_words_ids (`List[int]`, *optional*):
List of token ids that are not allowed to be generated that will be used by default in the `generate`
method of the model. In order to get the tokens of the words that should not appear in the generated text,
use `tokenizer.encode(bad_word, add_prefix_space=True)`.
num_return_sequences (`int`, *optional*, defaults to 1):
Number of independently computed returned sequences for each element in the batch that will be used by
default in the `generate` method of the model.
output_scores (`bool`, *optional*, defaults to `False`):
Whether the model should return the logits when used for generation.
return_dict_in_generate (`bool`, *optional*, defaults to `False`):
Whether the model should return a [`~transformers.file_utils.ModelOutput`] instead of a `torch.LongTensor`.
forced_bos_token_id (`int`, *optional*):
The id of the token to force as the first generated token after the `decoder_start_token_id`. Useful for
multilingual models like [mBART](../model_doc/mbart) where the first generated token needs to be the target
language token.
forced_eos_token_id (`int`, *optional*):
The id of the token to force as the last generated token when `max_length` is reached.
remove_invalid_values (`bool`, *optional*):
Whether to remove possible _nan_ and _inf_ outputs of the model to prevent the generation method to crash.
Note that using `remove_invalid_values` can slow down generation.
> Parameters for fine-tuning tasks
architectures (`List[str]`, *optional*):
Model architectures that can be used with the model pretrained weights.
finetuning_task (`str`, *optional*):
Name of the task used to fine-tune the model. This can be used when converting from an original (TensorFlow
or PyTorch) checkpoint.
id2label (`Dict[int, str]`, *optional*):
A map from index (for instance prediction index, or target index) to label.
label2id (`Dict[str, int]`, *optional*): A map from label to index for the model.
num_labels (`int`, *optional*):
Number of labels to use in the last layer added to the model, typically for a classification task.
task_specific_params (`Dict[str, Any]`, *optional*):
Additional keyword arguments to store for the current task.
problem_type (`str`, *optional*):
Problem type for `XxxForSequenceClassification` models. Can be one of `"regression"`,
`"single_label_classification"` or `"multi_label_classification"`.
> Parameters linked to the tokenizer
tokenizer_class (`str`, *optional*):
The name of the associated tokenizer class to use (if none is set, will use the tokenizer associated to the
model by default).
prefix (`str`, *optional*):
A specific prompt that should be added at the beginning of each text before calling the model.
bos_token_id (`int`, *optional*): The id of the _beginning-of-stream_ token.
pad_token_id (`int`, *optional*): The id of the _padding_ token.
eos_token_id (`int`, *optional*): The id of the _end-of-stream_ token.
decoder_start_token_id (`int`, *optional*):
If an encoder-decoder model starts decoding with a different token than _bos_, the id of that token.
sep_token_id (`int`, *optional*): The id of the _separation_ token.
> PyTorch specific parameters
torchscript (`bool`, *optional*, defaults to `False`):
Whether or not the model should be used with Torchscript.
tie_word_embeddings (`bool`, *optional*, defaults to `True`):
Whether the model's input and output word embeddings should be tied. Note that this is only relevant if the
model has a output word embedding layer.
torch_dtype (`str`, *optional*):
The `dtype` of the weights. This attribute can be used to initialize the model to a non-default `dtype`
(which is normally `float32`) and thus allow for optimal storage allocation. For example, if the saved
model is `float16`, ideally we want to load it back using the minimal amount of memory needed to load
`float16` weights. Since the config object is stored in plain text, this attribute contains just the
floating type string without the `torch.` prefix. For example, for `torch.float16` ``torch_dtype` is the
`"float16"` string.
This attribute is currently not being used during model loading time, but this may change in the future
versions. But we can already start preparing for the future by saving the dtype with save_pretrained.
> TensorFlow specific parameters
use_bfloat16 (`bool`, *optional*, defaults to `False`):
Whether or not the model should use BFloat16 scalars (only used by some TensorFlow models).
"""
model_type: str = ""
is_composition: bool = False
attribute_map: Dict[str, str] = {}
_auto_class: Optional[str] = None
def __setattr__(self, key, value):
if key in super().__getattribute__("attribute_map"):
key = super().__getattribute__("attribute_map")[key]
super().__setattr__(key, value)
def __getattribute__(self, key):
if key != "attribute_map" and key in super().__getattribute__("attribute_map"):
key = super().__getattribute__("attribute_map")[key]
return super().__getattribute__(key)
def __init__(self, **kwargs):
# Attributes with defaults
self.return_dict = kwargs.pop("return_dict", True)
self.output_hidden_states = kwargs.pop("output_hidden_states", False)
self.output_attentions = kwargs.pop("output_attentions", False)
self.torchscript = kwargs.pop("torchscript", False) # Only used by PyTorch models
self.torch_dtype = kwargs.pop("torch_dtype", None) # Only used by PyTorch models
self.use_bfloat16 = kwargs.pop("use_bfloat16", False)
self.pruned_heads = kwargs.pop("pruned_heads", {})
self.tie_word_embeddings = kwargs.pop(
"tie_word_embeddings", True
) # Whether input and output word embeddings should be tied for all MLM, LM and Seq2Seq models.
# Is decoder is used in encoder-decoder models to differentiate encoder from decoder
self.is_encoder_decoder = kwargs.pop("is_encoder_decoder", False)
self.is_decoder = kwargs.pop("is_decoder", False)
self.cross_attention_hidden_size = kwargs.pop("cross_attention_hidden_size", None)
self.add_cross_attention = kwargs.pop("add_cross_attention", False)
self.tie_encoder_decoder = kwargs.pop("tie_encoder_decoder", False)
# Parameters for sequence generation
self.max_length = kwargs.pop("max_length", 20)
self.min_length = kwargs.pop("min_length", 0)
self.do_sample = kwargs.pop("do_sample", False)
self.early_stopping = kwargs.pop("early_stopping", False)
self.num_beams = kwargs.pop("num_beams", 1)
self.num_beam_groups = kwargs.pop("num_beam_groups", 1)
self.diversity_penalty = kwargs.pop("diversity_penalty", 0.0)
self.temperature = kwargs.pop("temperature", 1.0)
self.top_k = kwargs.pop("top_k", 50)
self.top_p = kwargs.pop("top_p", 1.0)
self.typical_p = kwargs.pop("typical_p", 1.0)
self.repetition_penalty = kwargs.pop("repetition_penalty", 1.0)
self.length_penalty = kwargs.pop("length_penalty", 1.0)
self.no_repeat_ngram_size = kwargs.pop("no_repeat_ngram_size", 0)
self.encoder_no_repeat_ngram_size = kwargs.pop("encoder_no_repeat_ngram_size", 0)
self.bad_words_ids = kwargs.pop("bad_words_ids", None)
self.num_return_sequences = kwargs.pop("num_return_sequences", 1)
self.chunk_size_feed_forward = kwargs.pop("chunk_size_feed_forward", 0)
self.output_scores = kwargs.pop("output_scores", False)
self.return_dict_in_generate = kwargs.pop("return_dict_in_generate", False)
self.forced_bos_token_id = kwargs.pop("forced_bos_token_id", None)
self.forced_eos_token_id = kwargs.pop("forced_eos_token_id", None)
self.remove_invalid_values = kwargs.pop("remove_invalid_values", False)
# Fine-tuning task arguments
self.architectures = kwargs.pop("architectures", None)
self.finetuning_task = kwargs.pop("finetuning_task", None)
self.id2label = kwargs.pop("id2label", None)
self.label2id = kwargs.pop("label2id", None)
if self.id2label is not None:
kwargs.pop("num_labels", None)
self.id2label = dict((int(key), value) for key, value in self.id2label.items())
# Keys are always strings in JSON so convert ids to int here.
else:
self.num_labels = kwargs.pop("num_labels", 2)
if self.torch_dtype is not None and isinstance(self.torch_dtype, str):
# we will start using self.torch_dtype in v5, but to be consistent with
# from_pretrained's torch_dtype arg convert it to an actual torch.dtype object
if is_torch_available():
import torch
self.torch_dtype = getattr(torch, self.torch_dtype)
# Tokenizer arguments TODO: eventually tokenizer and models should share the same config
self.tokenizer_class = kwargs.pop("tokenizer_class", None)
self.prefix = kwargs.pop("prefix", None)
self.bos_token_id = kwargs.pop("bos_token_id", None)
self.pad_token_id = kwargs.pop("pad_token_id", None)
self.eos_token_id = kwargs.pop("eos_token_id", None)
self.sep_token_id = kwargs.pop("sep_token_id", None)
self.decoder_start_token_id = kwargs.pop("decoder_start_token_id", None)
# task specific arguments
self.task_specific_params = kwargs.pop("task_specific_params", None)
# regression / multi-label classification
self.problem_type = kwargs.pop("problem_type", None)
allowed_problem_types = ("regression", "single_label_classification", "multi_label_classification")
if self.problem_type is not None and self.problem_type not in allowed_problem_types:
raise ValueError(
f"The config parameter `problem_type` was not understood: received {self.problem_type} "
"but only 'regression', 'single_label_classification' and 'multi_label_classification' are valid."
)
# TPU arguments
if kwargs.pop("xla_device", None) is not None:
logger.warning(
"The `xla_device` argument has been deprecated in v4.4.0 of Transformers. It is ignored and you can "
"safely remove it from your `config.json` file."
)
# Name or path to the pretrained checkpoint
self._name_or_path = str(kwargs.pop("name_or_path", ""))
# Drop the transformers version info
self.transformers_version = kwargs.pop("transformers_version", None)
# Deal with gradient checkpointing
if kwargs.get("gradient_checkpointing", False):
warnings.warn(
"Passing `gradient_checkpointing` to a config initialization is deprecated and will be removed in v5 "
"Transformers. Using `model.gradient_checkpointing_enable()` instead, or if you are using the "
"`Trainer` API, pass `gradient_checkpointing=True` in your `TrainingArguments`."
)
# Additional attributes without default values
for key, value in kwargs.items():
try:
setattr(self, key, value)
except AttributeError as err:
logger.error(f"Can't set {key} with value {value} for {self}")
raise err
@property
def name_or_path(self) -> str:
return getattr(self, "_name_or_path", None)
@name_or_path.setter
def name_or_path(self, value):
self._name_or_path = str(value) # Make sure that name_or_path is a string (for JSON encoding)
@property
def use_return_dict(self) -> bool:
"""
`bool`: Whether or not return [`~file_utils.ModelOutput`] instead of tuples.
"""
# If torchscript is set, force `return_dict=False` to avoid jit errors
return self.return_dict and not self.torchscript
@property
def num_labels(self) -> int:
"""
`int`: The number of labels for classification models.
"""
return len(self.id2label)
@num_labels.setter
def num_labels(self, num_labels: int):
if not hasattr(self, "id2label") or self.id2label is None or len(self.id2label) != num_labels:
self.id2label = {i: f"LABEL_{i}" for i in range(num_labels)}
self.label2id = dict(zip(self.id2label.values(), self.id2label.keys()))
def save_pretrained(self, save_directory: Union[str, os.PathLike], push_to_hub: bool = False, **kwargs):
"""
Save a configuration object to the directory `save_directory`, so that it can be re-loaded using the
[`~PretrainedConfig.from_pretrained`] class method.
Args:
save_directory (`str` or `os.PathLike`):
Directory where the configuration JSON file will be saved (will be created if it does not exist).
push_to_hub (`bool`, *optional*, defaults to `False`):
Whether or not to push your model to the Hugging Face model hub after saving it.
<Tip warning={true}>
Using `push_to_hub=True` will synchronize the repository you are pushing to with `save_directory`,
which requires `save_directory` to be a local clone of the repo you are pushing to if it's an existing
folder. Pass along `temp_dir=True` to use a temporary directory instead.
</Tip>
kwargs:
Additional key word arguments passed along to the [`~file_utils.PushToHubMixin.push_to_hub`] method.
"""
if os.path.isfile(save_directory):
raise AssertionError(f"Provided path ({save_directory}) should be a directory, not a file")
if push_to_hub:
commit_message = kwargs.pop("commit_message", None)
repo = self._create_or_get_repo(save_directory, **kwargs)
os.makedirs(save_directory, exist_ok=True)
# If we have a custom config, we copy the file defining it in the folder and set the attributes so it can be
# loaded from the Hub.
if self._auto_class is not None:
custom_object_save(self, save_directory, config=self)
# If we save using the predefined names, we can load using `from_pretrained`
output_config_file = os.path.join(save_directory, CONFIG_NAME)
self.to_json_file(output_config_file, use_diff=True)
logger.info(f"Configuration saved in {output_config_file}")
if push_to_hub:
url = self._push_to_hub(repo, commit_message=commit_message)
logger.info(f"Configuration pushed to the hub in this commit: {url}")
@classmethod
def from_pretrained(cls, pretrained_model_name_or_path: Union[str, os.PathLike], **kwargs) -> "PretrainedConfig":
r"""
Instantiate a [`PretrainedConfig`] (or a derived class) from a pretrained model configuration.
Args:
pretrained_model_name_or_path (`str` or `os.PathLike`):
This can be either:
- a string, the *model id* of a pretrained model configuration hosted inside a model repo on
huggingface.co. Valid model ids can be located at the root-level, like `bert-base-uncased`, or
namespaced under a user or organization name, like `dbmdz/bert-base-german-cased`.
- a path to a *directory* containing a configuration file saved using the
[`~PretrainedConfig.save_pretrained`] method, e.g., `./my_model_directory/`.
- a path or url to a saved configuration JSON *file*, e.g., `./my_model_directory/configuration.json`.
cache_dir (`str` or `os.PathLike`, *optional*):
Path to a directory in which a downloaded pretrained model configuration should be cached if the
standard cache should not be used.
force_download (`bool`, *optional*, defaults to `False`):
Whether or not to force to (re-)download the configuration files and override the cached versions if
they exist.
resume_download (`bool`, *optional*, defaults to `False`):
Whether or not to delete incompletely received file. Attempts to resume the download if such a file
exists.
proxies (`Dict[str, str]`, *optional*):
A dictionary of proxy servers to use by protocol or endpoint, e.g., `{'http': 'foo.bar:3128',
'http://hostname': 'foo.bar:4012'}.` The proxies are used on each request.
use_auth_token (`str` or *bool*, *optional*):
The token to use as HTTP bearer authorization for remote files. If `True`, will use the token generated
when running `transformers-cli login` (stored in `~/.huggingface`).
revision(`str`, *optional*, defaults to `"main"`):
The specific model version to use. It can be a branch name, a tag name, or a commit id, since we use a
git-based system for storing models and other artifacts on huggingface.co, so `revision` can be any
identifier allowed by git.
return_unused_kwargs (`bool`, *optional*, defaults to `False`):
If `False`, then this function returns just the final configuration object.
If `True`, then this functions returns a `Tuple(config, unused_kwargs)` where *unused_kwargs* is a
dictionary consisting of the key/value pairs whose keys are not configuration attributes: i.e., the
part of `kwargs` which has not been used to update `config` and is otherwise ignored.
kwargs (`Dict[str, Any]`, *optional*):
The values in kwargs of any keys which are configuration attributes will be used to override the loaded
values. Behavior concerning key/value pairs whose keys are *not* configuration attributes is controlled
by the `return_unused_kwargs` keyword parameter.
<Tip>
Passing `use_auth_token=True` is required when you want to use a private model.
</Tip>
Returns:
[`PretrainedConfig`]: The configuration object instantiated from this pretrained model.
Examples:
```python
# We can't instantiate directly the base class *PretrainedConfig* so let's show the examples on a
# derived class: BertConfig
config = BertConfig.from_pretrained(
"bert-base-uncased"
) # Download configuration from huggingface.co and cache.
config = BertConfig.from_pretrained(
"./test/saved_model/"
) # E.g. config (or model) was saved using *save_pretrained('./test/saved_model/')*
config = BertConfig.from_pretrained("./test/saved_model/my_configuration.json")
config = BertConfig.from_pretrained("bert-base-uncased", output_attentions=True, foo=False)
assert config.output_attentions == True
config, unused_kwargs = BertConfig.from_pretrained(
"bert-base-uncased", output_attentions=True, foo=False, return_unused_kwargs=True
)
assert config.output_attentions == True
assert unused_kwargs == {"foo": False}
```"""
config_dict, kwargs = cls.get_config_dict(pretrained_model_name_or_path, **kwargs)
if "model_type" in config_dict and hasattr(cls, "model_type") and config_dict["model_type"] != cls.model_type:
logger.warning(
f"You are using a model of type {config_dict['model_type']} to instantiate a model of type "
f"{cls.model_type}. This is not supported for all configurations of models and can yield errors."
)
return cls.from_dict(config_dict, **kwargs)
@classmethod
def get_config_dict(
cls, pretrained_model_name_or_path: Union[str, os.PathLike], **kwargs
) -> Tuple[Dict[str, Any], Dict[str, Any]]:
"""
From a `pretrained_model_name_or_path`, resolve to a dictionary of parameters, to be used for instantiating a
[`PretrainedConfig`] using `from_dict`.
Parameters:
pretrained_model_name_or_path (`str` or `os.PathLike`):
The identifier of the pre-trained checkpoint from which we want the dictionary of parameters.
Returns:
`Tuple[Dict, Dict]`: The dictionary(ies) that will be used to instantiate the configuration object.
"""
original_kwargs = copy.deepcopy(kwargs)
# Get config dict associated with the base config file
config_dict, kwargs = cls._get_config_dict(pretrained_model_name_or_path, **kwargs)
# That config file may point us toward another config file to use.
if "configuration_files" in config_dict:
configuration_file = get_configuration_file(config_dict["configuration_files"])
config_dict, kwargs = cls._get_config_dict(
pretrained_model_name_or_path, _configuration_file=configuration_file, **original_kwargs
)
return config_dict, kwargs
@classmethod
def _get_config_dict(
cls, pretrained_model_name_or_path: Union[str, os.PathLike], **kwargs
) -> Tuple[Dict[str, Any], Dict[str, Any]]:
cache_dir = kwargs.pop("cache_dir", None)
force_download = kwargs.pop("force_download", False)
resume_download = kwargs.pop("resume_download", False)
proxies = kwargs.pop("proxies", None)
use_auth_token = kwargs.pop("use_auth_token", None)
local_files_only = kwargs.pop("local_files_only", False)
revision = kwargs.pop("revision", None)
from_pipeline = kwargs.pop("_from_pipeline", None)
from_auto_class = kwargs.pop("_from_auto", False)
user_agent = {"file_type": "config", "from_auto_class": from_auto_class}
if from_pipeline is not None:
user_agent["using_pipeline"] = from_pipeline
if is_offline_mode() and not local_files_only:
logger.info("Offline mode: forcing local_files_only=True")
local_files_only = True
pretrained_model_name_or_path = str(pretrained_model_name_or_path)
if os.path.isfile(pretrained_model_name_or_path) or is_remote_url(pretrained_model_name_or_path):
config_file = pretrained_model_name_or_path
else:
configuration_file = kwargs.pop("_configuration_file", CONFIG_NAME)
if os.path.isdir(pretrained_model_name_or_path):
config_file = os.path.join(pretrained_model_name_or_path, configuration_file)
else:
config_file = hf_bucket_url(
pretrained_model_name_or_path, filename=configuration_file, revision=revision, mirror=None
)
try:
# Load from URL or cache if already cached
resolved_config_file = cached_path(
config_file,
cache_dir=cache_dir,
force_download=force_download,
proxies=proxies,
resume_download=resume_download,
local_files_only=local_files_only,
use_auth_token=use_auth_token,
user_agent=user_agent,
)
except RepositoryNotFoundError:
raise EnvironmentError(
f"{pretrained_model_name_or_path} is not a local folder and is not a valid model identifier listed on "
"'https://huggingface.co/models'\nIf this is a private repository, make sure to pass a token having "
"permission to this repo with `use_auth_token` or log in with `huggingface-cli login` and pass "
"`use_auth_token=True`."
)
except RevisionNotFoundError:
raise EnvironmentError(
f"{revision} is not a valid git identifier (branch name, tag name or commit id) that exists for this "
f"model name. Check the model page at 'https://huggingface.co/{pretrained_model_name_or_path}' for "
"available revisions."
)
except EntryNotFoundError:
raise EnvironmentError(
f"{pretrained_model_name_or_path} does not appear to have a file named {configuration_file}."
)
except HTTPError:
raise EnvironmentError(
"We couldn't connect to 'https://huggingface.co/' to load this model and it looks like "
f"{pretrained_model_name_or_path} is not the path to a directory conaining a {configuration_file} "
"file.\nCheckout your internet connection or see how to run the library in offline mode at "
"'https://huggingface.co/docs/transformers/installation#offline-mode'."
)
except EnvironmentError:
raise EnvironmentError(
f"Can't load config for '{pretrained_model_name_or_path}'. If you were trying to load it from "
"'https://huggingface.co/models', make sure you don't have a local directory with the same name. "
f"Otherwise, make sure '{pretrained_model_name_or_path}' is the correct path to a directory "
f"containing a {configuration_file} file"
)
try:
# Load config dict
config_dict = cls._dict_from_json_file(resolved_config_file)
except (json.JSONDecodeError, UnicodeDecodeError):
raise EnvironmentError(
f"It looks like the config file at '{resolved_config_file}' is not a valid JSON file."
)
if resolved_config_file == config_file:
logger.info(f"loading configuration file {config_file}")
else:
logger.info(f"loading configuration file {config_file} from cache at {resolved_config_file}")
return config_dict, kwargs
@classmethod
def from_dict(cls, config_dict: Dict[str, Any], **kwargs) -> "PretrainedConfig":
"""
Instantiates a [`PretrainedConfig`] from a Python dictionary of parameters.
Args:
config_dict (`Dict[str, Any]`):
Dictionary that will be used to instantiate the configuration object. Such a dictionary can be
retrieved from a pretrained checkpoint by leveraging the [`~PretrainedConfig.get_config_dict`] method.
kwargs (`Dict[str, Any]`):
Additional parameters from which to initialize the configuration object.
Returns:
[`PretrainedConfig`]: The configuration object instantiated from those parameters.
"""
return_unused_kwargs = kwargs.pop("return_unused_kwargs", False)
config = cls(**config_dict)
if hasattr(config, "pruned_heads"):
config.pruned_heads = dict((int(key), value) for key, value in config.pruned_heads.items())
# Update config with kwargs if needed
to_remove = []
for key, value in kwargs.items():
if hasattr(config, key):
setattr(config, key, value)
if key != "torch_dtype":
to_remove.append(key)
for key in to_remove:
kwargs.pop(key, None)
logger.info(f"Model config {config}")
if return_unused_kwargs:
return config, kwargs
else:
return config
@classmethod
def from_json_file(cls, json_file: Union[str, os.PathLike]) -> "PretrainedConfig":
"""
Instantiates a [`PretrainedConfig`] from the path to a JSON file of parameters.
Args:
json_file (`str` or `os.PathLike`):
Path to the JSON file containing the parameters.
Returns:
[`PretrainedConfig`]: The configuration object instantiated from that JSON file.
"""
config_dict = cls._dict_from_json_file(json_file)
return cls(**config_dict)
@classmethod
def _dict_from_json_file(cls, json_file: Union[str, os.PathLike]):
with open(json_file, "r", encoding="utf-8") as reader:
text = reader.read()
return json.loads(text)
def __eq__(self, other):
return self.__dict__ == other.__dict__
def __repr__(self):
return f"{self.__class__.__name__} {self.to_json_string()}"
def to_diff_dict(self) -> Dict[str, Any]:
"""
Removes all attributes from config which correspond to the default config attributes for better readability and
serializes to a Python dictionary.
Returns:
`Dict[str, Any]`: Dictionary of all the attributes that make up this configuration instance,
"""
config_dict = self.to_dict()
# get the default config dict
default_config_dict = PretrainedConfig().to_dict()
# get class specific config dict
class_config_dict = self.__class__().to_dict() if not self.is_composition else {}
serializable_config_dict = {}
# only serialize values that differ from the default config
for key, value in config_dict.items():
if (
key not in default_config_dict
or key == "transformers_version"
or value != default_config_dict[key]
or (key in class_config_dict and value != class_config_dict[key])
):
serializable_config_dict[key] = value
self.dict_torch_dtype_to_str(serializable_config_dict)
return serializable_config_dict
def to_dict(self) -> Dict[str, Any]:
"""
Serializes this instance to a Python dictionary.
Returns:
`Dict[str, Any]`: Dictionary of all the attributes that make up this configuration instance.
"""
output = copy.deepcopy(self.__dict__)
if hasattr(self.__class__, "model_type"):
output["model_type"] = self.__class__.model_type
if "_auto_class" in output:
del output["_auto_class"]
# Transformers version when serializing the model
output["transformers_version"] = __version__
self.dict_torch_dtype_to_str(output)
return output
def to_json_string(self, use_diff: bool = True) -> str:
"""
Serializes this instance to a JSON string.
Args:
use_diff (`bool`, *optional*, defaults to `True`):
If set to `True`, only the difference between the config instance and the default `PretrainedConfig()`
is serialized to JSON string.
Returns:
`str`: String containing all the attributes that make up this configuration instance in JSON format.
"""
if use_diff is True:
config_dict = self.to_diff_dict()
else:
config_dict = self.to_dict()
return json.dumps(config_dict, indent=2, sort_keys=True) + "\n"
def to_json_file(self, json_file_path: Union[str, os.PathLike], use_diff: bool = True):
"""
Save this instance to a JSON file.
Args:
json_file_path (`str` or `os.PathLike`):
Path to the JSON file in which this configuration instance's parameters will be saved.
use_diff (`bool`, *optional*, defaults to `True`):
If set to `True`, only the difference between the config instance and the default `PretrainedConfig()`
is serialized to JSON file.
"""
with open(json_file_path, "w", encoding="utf-8") as writer:
writer.write(self.to_json_string(use_diff=use_diff))
def update(self, config_dict: Dict[str, Any]):
"""
Updates attributes of this class with attributes from `config_dict`.
Args:
config_dict (`Dict[str, Any]`): Dictionary of attributes that should be updated for this class.
"""
for key, value in config_dict.items():
setattr(self, key, value)
def update_from_string(self, update_str: str):
"""
Updates attributes of this class with attributes from `update_str`.
The expected format is ints, floats and strings as is, and for booleans use `true` or `false`. For example:
"n_embd=10,resid_pdrop=0.2,scale_attn_weights=false,summary_type=cls_index"
The keys to change have to already exist in the config object.
Args:
update_str (`str`): String with attributes that should be updated for this class.
"""
d = dict(x.split("=") for x in update_str.split(","))
for k, v in d.items():
if not hasattr(self, k):
raise ValueError(f"key {k} isn't in the original config dict")
old_v = getattr(self, k)
if isinstance(old_v, bool):
if v.lower() in ["true", "1", "y", "yes"]:
v = True
elif v.lower() in ["false", "0", "n", "no"]:
v = False
else:
raise ValueError(f"can't derive true or false from {v} (key {k})")
elif isinstance(old_v, int):
v = int(v)
elif isinstance(old_v, float):
v = float(v)
elif not isinstance(old_v, str):
raise ValueError(
f"You can only update int, float, bool or string values in the config, got {v} for key {k}"
)
setattr(self, k, v)
def dict_torch_dtype_to_str(self, d: Dict[str, Any]) -> None:
"""
Checks whether the passed dictionary has a *torch_dtype* key and if it's not None, converts torch.dtype to a
string of just the type. For example, `torch.float32` get converted into *"float32"* string, which can then be
stored in the json format.
"""
if d.get("torch_dtype", None) is not None and not isinstance(d["torch_dtype"], str):
d["torch_dtype"] = str(d["torch_dtype"]).split(".")[1]
@classmethod
def register_for_auto_class(cls, auto_class="AutoConfig"):
"""
Register this class with a given auto class. This should only be used for custom configurations as the ones in
the library are already mapped with `AutoConfig`.
<Tip warning={true}>
This API is experimental and may have some slight breaking changes in the next releases.
</Tip>
Args:
auto_class (`str` or `type`, *optional*, defaults to `"AutoConfig"`):
The auto class to register this new configuration with.
"""
if not isinstance(auto_class, str):
auto_class = auto_class.__name__
import transformers.models.auto as auto_module
if not hasattr(auto_module, auto_class):
raise ValueError(f"{auto_class} is not a valid auto class.")
cls._auto_class = auto_class
def get_configuration_file(configuration_files: List[str]) -> str:
"""
Get the configuration file to use for this version of transformers.
Args:
configuration_files (`List[str]`): The list of available configuration files.
Returns:
`str`: The configuration file to use.
"""
configuration_files_map = {}
for file_name in configuration_files:
search = _re_configuration_file.search(file_name)
if search is not None:
v = search.groups()[0]
configuration_files_map[v] = file_name
available_versions = sorted(configuration_files_map.keys())
# Defaults to FULL_CONFIGURATION_FILE and then try to look at some newer versions.
configuration_file = CONFIG_NAME
transformers_version = version.parse(__version__)
for v in available_versions:
if version.parse(v) <= transformers_version:
configuration_file = configuration_files_map[v]
else:
# No point going further since the versions are sorted.
break
return configuration_file
PretrainedConfig.push_to_hub = copy_func(PretrainedConfig.push_to_hub)
PretrainedConfig.push_to_hub.__doc__ = PretrainedConfig.push_to_hub.__doc__.format(
object="config", object_class="AutoConfig", object_files="configuration file"
)
| 46,267 | 49.236699 | 119 | py |
robust-transformers | robust-transformers-main/src/transformers/optimization_tf.py | # Copyright 2019 The TensorFlow Authors, The Hugging Face Team. All Rights Reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
# ==============================================================================
"""Functions and classes related to optimization (weight updates)."""
import re
from typing import Callable, List, Optional, Union
import tensorflow as tf
class WarmUp(tf.keras.optimizers.schedules.LearningRateSchedule):
"""
Applies a warmup schedule on a given learning rate decay schedule.
Args:
initial_learning_rate (`float`):
The initial learning rate for the schedule after the warmup (so this will be the learning rate at the end
of the warmup).
decay_schedule_fn (`Callable`):
The schedule function to apply after the warmup for the rest of training.
warmup_steps (`int`):
The number of steps for the warmup part of training.
power (`float`, *optional*, defaults to 1):
The power to use for the polynomial warmup (defaults is a linear warmup).
name (`str`, *optional*):
Optional name prefix for the returned tensors during the schedule.
"""
def __init__(
self,
initial_learning_rate: float,
decay_schedule_fn: Callable,
warmup_steps: int,
power: float = 1.0,
name: str = None,
):
super().__init__()
self.initial_learning_rate = initial_learning_rate
self.warmup_steps = warmup_steps
self.power = power
self.decay_schedule_fn = decay_schedule_fn
self.name = name
def __call__(self, step):
with tf.name_scope(self.name or "WarmUp") as name:
# Implements polynomial warmup. i.e., if global_step < warmup_steps, the
# learning rate will be `global_step/num_warmup_steps * init_lr`.
global_step_float = tf.cast(step, tf.float32)
warmup_steps_float = tf.cast(self.warmup_steps, tf.float32)
warmup_percent_done = global_step_float / warmup_steps_float
warmup_learning_rate = self.initial_learning_rate * tf.math.pow(warmup_percent_done, self.power)
return tf.cond(
global_step_float < warmup_steps_float,
lambda: warmup_learning_rate,
lambda: self.decay_schedule_fn(step - self.warmup_steps),
name=name,
)
def get_config(self):
return {
"initial_learning_rate": self.initial_learning_rate,
"decay_schedule_fn": self.decay_schedule_fn,
"warmup_steps": self.warmup_steps,
"power": self.power,
"name": self.name,
}
def create_optimizer(
init_lr: float,
num_train_steps: int,
num_warmup_steps: int,
min_lr_ratio: float = 0.0,
adam_beta1: float = 0.9,
adam_beta2: float = 0.999,
adam_epsilon: float = 1e-8,
weight_decay_rate: float = 0.0,
power: float = 1.0,
include_in_weight_decay: Optional[List[str]] = None,
):
"""
Creates an optimizer with a learning rate schedule using a warmup phase followed by a linear decay.
Args:
init_lr (`float`):
The desired learning rate at the end of the warmup phase.
num_train_steps (`int`):
The total number of training steps.
num_warmup_steps (`int`):
The number of warmup steps.
min_lr_ratio (`float`, *optional*, defaults to 0):
The final learning rate at the end of the linear decay will be `init_lr * min_lr_ratio`.
adam_beta1 (`float`, *optional*, defaults to 0.9):
The beta1 to use in Adam.
adam_beta2 (`float`, *optional*, defaults to 0.999):
The beta2 to use in Adam.
adam_epsilon (`float`, *optional*, defaults to 1e-8):
The epsilon to use in Adam.
weight_decay_rate (`float`, *optional*, defaults to 0):
The weight decay to use.
power (`float`, *optional*, defaults to 1.0):
The power to use for PolynomialDecay.
include_in_weight_decay (`List[str]`, *optional*):
List of the parameter names (or re patterns) to apply weight decay to. If none is passed, weight decay is
applied to all parameters except bias and layer norm parameters.
"""
# Implements linear decay of the learning rate.
lr_schedule = tf.keras.optimizers.schedules.PolynomialDecay(
initial_learning_rate=init_lr,
decay_steps=num_train_steps - num_warmup_steps,
end_learning_rate=init_lr * min_lr_ratio,
power=power,
)
if num_warmup_steps:
lr_schedule = WarmUp(
initial_learning_rate=init_lr,
decay_schedule_fn=lr_schedule,
warmup_steps=num_warmup_steps,
)
if weight_decay_rate > 0.0:
optimizer = AdamWeightDecay(
learning_rate=lr_schedule,
weight_decay_rate=weight_decay_rate,
beta_1=adam_beta1,
beta_2=adam_beta2,
epsilon=adam_epsilon,
exclude_from_weight_decay=["LayerNorm", "layer_norm", "bias"],
include_in_weight_decay=include_in_weight_decay,
)
else:
optimizer = tf.keras.optimizers.Adam(
learning_rate=lr_schedule, beta_1=adam_beta1, beta_2=adam_beta2, epsilon=adam_epsilon
)
# We return the optimizer and the LR scheduler in order to better track the
# evolution of the LR independently of the optimizer.
return optimizer, lr_schedule
class AdamWeightDecay(tf.keras.optimizers.Adam):
"""
Adam enables L2 weight decay and clip_by_global_norm on gradients. Just adding the square of the weights to the
loss function is *not* the correct way of using L2 regularization/weight decay with Adam, since that will interact
with the m and v parameters in strange ways as shown in [Decoupled Weight Decay
Regularization](https://arxiv.org/abs/1711.05101).
Instead we want ot decay the weights in a manner that doesn't interact with the m/v parameters. This is equivalent
to adding the square of the weights to the loss with plain (non-momentum) SGD.
Args:
learning_rate (`Union[float, tf.keras.optimizers.schedules.LearningRateSchedule]`, *optional*, defaults to 1e-3):
The learning rate to use or a schedule.
beta_1 (`float`, *optional*, defaults to 0.9):
The beta1 parameter in Adam, which is the exponential decay rate for the 1st momentum estimates.
beta_2 (`float`, *optional*, defaults to 0.999):
The beta2 parameter in Adam, which is the exponential decay rate for the 2nd momentum estimates.
epsilon (`float`, *optional*, defaults to 1e-7):
The epsilon parameter in Adam, which is a small constant for numerical stability.
amsgrad (`bool`, *optional*, default to `False`):
Whether to apply AMSGrad variant of this algorithm or not, see [On the Convergence of Adam and
Beyond](https://arxiv.org/abs/1904.09237).
weight_decay_rate (`float`, *optional*, defaults to 0):
The weight decay to apply.
include_in_weight_decay (`List[str]`, *optional*):
List of the parameter names (or re patterns) to apply weight decay to. If none is passed, weight decay is
applied to all parameters by default (unless they are in `exclude_from_weight_decay`).
exclude_from_weight_decay (`List[str]`, *optional*):
List of the parameter names (or re patterns) to exclude from applying weight decay to. If a
`include_in_weight_decay` is passed, the names in it will supersede this list.
name (`str`, *optional*, defaults to 'AdamWeightDecay'):
Optional name for the operations created when applying gradients.
kwargs:
Keyword arguments. Allowed to be {`clipnorm`, `clipvalue`, `lr`, `decay`}. `clipnorm` is clip gradients by
norm; `clipvalue` is clip gradients by value, `decay` is included for backward compatibility to allow time
inverse decay of learning rate. `lr` is included for backward compatibility, recommended to use
`learning_rate` instead.
"""
def __init__(
self,
learning_rate: Union[float, tf.keras.optimizers.schedules.LearningRateSchedule] = 0.001,
beta_1: float = 0.9,
beta_2: float = 0.999,
epsilon: float = 1e-7,
amsgrad: bool = False,
weight_decay_rate: float = 0.0,
include_in_weight_decay: Optional[List[str]] = None,
exclude_from_weight_decay: Optional[List[str]] = None,
name: str = "AdamWeightDecay",
**kwargs
):
super().__init__(learning_rate, beta_1, beta_2, epsilon, amsgrad, name, **kwargs)
self.weight_decay_rate = weight_decay_rate
self._include_in_weight_decay = include_in_weight_decay
self._exclude_from_weight_decay = exclude_from_weight_decay
@classmethod
def from_config(cls, config):
"""Creates an optimizer from its config with WarmUp custom object."""
custom_objects = {"WarmUp": WarmUp}
return super(AdamWeightDecay, cls).from_config(config, custom_objects=custom_objects)
def _prepare_local(self, var_device, var_dtype, apply_state):
super(AdamWeightDecay, self)._prepare_local(var_device, var_dtype, apply_state)
apply_state[(var_device, var_dtype)]["weight_decay_rate"] = tf.constant(
self.weight_decay_rate, name="adam_weight_decay_rate"
)
def _decay_weights_op(self, var, learning_rate, apply_state):
do_decay = self._do_use_weight_decay(var.name)
if do_decay:
return var.assign_sub(
learning_rate * var * apply_state[(var.device, var.dtype.base_dtype)]["weight_decay_rate"],
use_locking=self._use_locking,
)
return tf.no_op()
def apply_gradients(self, grads_and_vars, name=None, **kwargs):
grads, tvars = list(zip(*grads_and_vars))
return super(AdamWeightDecay, self).apply_gradients(zip(grads, tvars), name=name, **kwargs)
def _get_lr(self, var_device, var_dtype, apply_state):
"""Retrieves the learning rate with the given state."""
if apply_state is None:
return self._decayed_lr_t[var_dtype], {}
apply_state = apply_state or {}
coefficients = apply_state.get((var_device, var_dtype))
if coefficients is None:
coefficients = self._fallback_apply_state(var_device, var_dtype)
apply_state[(var_device, var_dtype)] = coefficients
return coefficients["lr_t"], dict(apply_state=apply_state)
def _resource_apply_dense(self, grad, var, apply_state=None):
lr_t, kwargs = self._get_lr(var.device, var.dtype.base_dtype, apply_state)
decay = self._decay_weights_op(var, lr_t, apply_state)
with tf.control_dependencies([decay]):
return super(AdamWeightDecay, self)._resource_apply_dense(grad, var, **kwargs)
def _resource_apply_sparse(self, grad, var, indices, apply_state=None):
lr_t, kwargs = self._get_lr(var.device, var.dtype.base_dtype, apply_state)
decay = self._decay_weights_op(var, lr_t, apply_state)
with tf.control_dependencies([decay]):
return super(AdamWeightDecay, self)._resource_apply_sparse(grad, var, indices, **kwargs)
def get_config(self):
config = super().get_config()
config.update({"weight_decay_rate": self.weight_decay_rate})
return config
def _do_use_weight_decay(self, param_name):
"""Whether to use L2 weight decay for `param_name`."""
if self.weight_decay_rate == 0:
return False
if self._include_in_weight_decay:
for r in self._include_in_weight_decay:
if re.search(r, param_name) is not None:
return True
if self._exclude_from_weight_decay:
for r in self._exclude_from_weight_decay:
if re.search(r, param_name) is not None:
return False
return True
# Extracted from https://github.com/OpenNMT/OpenNMT-tf/blob/master/opennmt/optimizers/utils.py
class GradientAccumulator(object):
"""
Gradient accumulation utility. When used with a distribution strategy, the accumulator should be called in a
replica context. Gradients will be accumulated locally on each replica and without synchronization. Users should
then call `.gradients`, scale the gradients if required, and pass the result to `apply_gradients`.
"""
# We use the ON_READ synchronization policy so that no synchronization is
# performed on assignment. To get the value, we call .value() which returns the
# value on the current replica without synchronization.
def __init__(self):
"""Initializes the accumulator."""
self._gradients = []
self._accum_steps = None
@property
def step(self):
"""Number of accumulated steps."""
if self._accum_steps is None:
self._accum_steps = tf.Variable(
tf.constant(0, dtype=tf.int64),
trainable=False,
synchronization=tf.VariableSynchronization.ON_READ,
aggregation=tf.VariableAggregation.ONLY_FIRST_REPLICA,
)
return self._accum_steps.value()
@property
def gradients(self):
"""The accumulated gradients on the current replica."""
if not self._gradients:
raise ValueError("The accumulator should be called first to initialize the gradients")
return list(gradient.value() if gradient is not None else gradient for gradient in self._gradients)
def __call__(self, gradients):
"""Accumulates `gradients` on the current replica."""
if not self._gradients:
_ = self.step # Create the step variable.
self._gradients.extend(
[
tf.Variable(
tf.zeros_like(gradient),
trainable=False,
synchronization=tf.VariableSynchronization.ON_READ,
aggregation=tf.VariableAggregation.ONLY_FIRST_REPLICA,
)
if gradient is not None
else gradient
for gradient in gradients
]
)
if len(gradients) != len(self._gradients):
raise ValueError(f"Expected {len(self._gradients)} gradients, but got {len(gradients)}")
for accum_gradient, gradient in zip(self._gradients, gradients):
if accum_gradient is not None and gradient is not None:
accum_gradient.assign_add(gradient)
self._accum_steps.assign_add(1)
def reset(self):
"""Resets the accumulated gradients on the current replica."""
if not self._gradients:
return
self._accum_steps.assign(0)
for gradient in self._gradients:
if gradient is not None:
gradient.assign(tf.zeros_like(gradient))
| 15,722 | 43.667614 | 121 | py |
robust-transformers | robust-transformers-main/src/transformers/modeling_tf_pytorch_utils.py | # coding=utf-8
# Copyright 2018 The Google AI Language Team Authors and The HuggingFace Inc. team.
# Copyright (c) 2018, NVIDIA CORPORATION. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
""" PyTorch - TF 2.0 general utilities."""
import os
import re
import numpy
from .file_utils import ExplicitEnum
from .utils import logging
logger = logging.get_logger(__name__)
class TransposeType(ExplicitEnum):
"""
Possible ...
"""
NO = "no"
SIMPLE = "simple"
CONV1D = "conv1d"
CONV2D = "conv2d"
def convert_tf_weight_name_to_pt_weight_name(tf_name, start_prefix_to_remove="", tf_weight_shape=None):
"""
Convert a TF 2.0 model variable name in a pytorch model weight name.
Conventions for TF2.0 scopes -> PyTorch attribute names conversions:
- '$1___$2' is replaced by $2 (can be used to duplicate or remove layers in TF2.0 vs PyTorch)
- '_._' is replaced by a new level separation (can be used to convert TF2.0 lists in PyTorch nn.ModulesList)
return tuple with:
- pytorch model weight name
- transpose: `TransposeType` member indicating whether and how TF2.0 and PyTorch weights matrices should be
transposed with regards to each other
"""
tf_name = tf_name.replace(":0", "") # device ids
tf_name = re.sub(
r"/[^/]*___([^/]*)/", r"/\1/", tf_name
) # '$1___$2' is replaced by $2 (can be used to duplicate or remove layers in TF2.0 vs PyTorch)
tf_name = tf_name.replace(
"_._", "/"
) # '_._' is replaced by a level separation (can be used to convert TF2.0 lists in PyTorch nn.ModulesList)
tf_name = re.sub(r"//+", "/", tf_name) # Remove empty levels at the end
tf_name = tf_name.split("/") # Convert from TF2.0 '/' separators to PyTorch '.' separators
# Some weights have a single name without "/" such as final_logits_bias in BART
if len(tf_name) > 1:
tf_name = tf_name[1:] # Remove level zero
# When should we transpose the weights
if tf_name[-1] == "kernel" and tf_weight_shape is not None and tf_weight_shape.rank == 4:
transpose = TransposeType.CONV2D
elif tf_name[-1] == "kernel" and tf_weight_shape is not None and tf_weight_shape.rank == 3:
transpose = TransposeType.CONV1D
elif bool(
tf_name[-1] in ["kernel", "pointwise_kernel", "depthwise_kernel"]
or "emb_projs" in tf_name
or "out_projs" in tf_name
):
transpose = TransposeType.SIMPLE
else:
transpose = TransposeType.NO
# Convert standard TF2.0 names in PyTorch names
if tf_name[-1] == "kernel" or tf_name[-1] == "embeddings" or tf_name[-1] == "gamma":
tf_name[-1] = "weight"
if tf_name[-1] == "beta":
tf_name[-1] = "bias"
# The SeparableConv1D TF layer contains two weights that are translated to PyTorch Conv1D here
if tf_name[-1] == "pointwise_kernel" or tf_name[-1] == "depthwise_kernel":
tf_name[-1] = tf_name[-1].replace("_kernel", ".weight")
# Remove prefix if needed
tf_name = ".".join(tf_name)
if start_prefix_to_remove:
tf_name = tf_name.replace(start_prefix_to_remove, "", 1)
return tf_name, transpose
#####################
# PyTorch => TF 2.0 #
#####################
def load_pytorch_checkpoint_in_tf2_model(tf_model, pytorch_checkpoint_path, tf_inputs=None, allow_missing_keys=False):
"""Load pytorch checkpoints in a TF 2.0 model"""
try:
import tensorflow as tf # noqa: F401
import torch # noqa: F401
except ImportError:
logger.error(
"Loading a PyTorch model in TensorFlow, requires both PyTorch and TensorFlow to be installed. Please see "
"https://pytorch.org/ and https://www.tensorflow.org/install/ for installation instructions."
)
raise
pt_path = os.path.abspath(pytorch_checkpoint_path)
logger.info(f"Loading PyTorch weights from {pt_path}")
pt_state_dict = torch.load(pt_path, map_location="cpu")
logger.info(f"PyTorch checkpoint contains {sum(t.numel() for t in pt_state_dict.values()):,} parameters")
return load_pytorch_weights_in_tf2_model(
tf_model, pt_state_dict, tf_inputs=tf_inputs, allow_missing_keys=allow_missing_keys
)
def load_pytorch_model_in_tf2_model(tf_model, pt_model, tf_inputs=None, allow_missing_keys=False):
"""Load pytorch checkpoints in a TF 2.0 model"""
pt_state_dict = pt_model.state_dict()
return load_pytorch_weights_in_tf2_model(
tf_model, pt_state_dict, tf_inputs=tf_inputs, allow_missing_keys=allow_missing_keys
)
def load_pytorch_weights_in_tf2_model(tf_model, pt_state_dict, tf_inputs=None, allow_missing_keys=False):
"""Load pytorch state_dict in a TF 2.0 model."""
try:
import tensorflow as tf # noqa: F401
import torch # noqa: F401
from tensorflow.python.keras import backend as K
except ImportError:
logger.error(
"Loading a PyTorch model in TensorFlow, requires both PyTorch and TensorFlow to be installed. Please see "
"https://pytorch.org/ and https://www.tensorflow.org/install/ for installation instructions."
)
raise
if tf_inputs is None:
tf_inputs = tf_model.dummy_inputs
if tf_inputs is not None:
tf_model(tf_inputs, training=False) # Make sure model is built
# Adapt state dict - TODO remove this and update the AWS weights files instead
# Convert old format to new format if needed from a PyTorch state_dict
old_keys = []
new_keys = []
for key in pt_state_dict.keys():
new_key = None
if "gamma" in key:
new_key = key.replace("gamma", "weight")
if "beta" in key:
new_key = key.replace("beta", "bias")
if new_key:
old_keys.append(key)
new_keys.append(new_key)
for old_key, new_key in zip(old_keys, new_keys):
pt_state_dict[new_key] = pt_state_dict.pop(old_key)
# Make sure we are able to load PyTorch base models as well as derived models (with heads)
# TF models always have a prefix, some of PyTorch models (base ones) don't
start_prefix_to_remove = ""
if not any(s.startswith(tf_model.base_model_prefix) for s in pt_state_dict.keys()):
start_prefix_to_remove = tf_model.base_model_prefix + "."
symbolic_weights = tf_model.trainable_weights + tf_model.non_trainable_weights
tf_loaded_numel = 0
weight_value_tuples = []
all_pytorch_weights = set(list(pt_state_dict.keys()))
missing_keys = []
for symbolic_weight in symbolic_weights:
sw_name = symbolic_weight.name
name, transpose = convert_tf_weight_name_to_pt_weight_name(
sw_name, start_prefix_to_remove=start_prefix_to_remove, tf_weight_shape=symbolic_weight.shape
)
# Find associated numpy array in pytorch model state dict
if name not in pt_state_dict:
if allow_missing_keys:
missing_keys.append(name)
continue
elif tf_model._keys_to_ignore_on_load_missing is not None:
# authorized missing keys don't have to be loaded
if any(re.search(pat, name) is not None for pat in tf_model._keys_to_ignore_on_load_missing):
continue
raise AttributeError(f"{name} not found in PyTorch model")
array = pt_state_dict[name].numpy()
if transpose is TransposeType.CONV2D:
# Conv2D weight:
# PT: (num_out_channel, num_in_channel, kernel[0], kernel[1])
# -> TF: (kernel[0], kernel[1], num_in_channel, num_out_channel)
array = numpy.transpose(array, axes=(2, 3, 1, 0))
elif transpose is TransposeType.CONV1D:
# Conv1D weight:
# PT: (num_out_channel, num_in_channel, kernel)
# -> TF: (kernel, num_in_channel, num_out_channel)
array = numpy.transpose(array, axes=(2, 1, 0))
elif transpose is TransposeType.SIMPLE:
array = numpy.transpose(array)
if len(symbolic_weight.shape) < len(array.shape):
array = numpy.squeeze(array)
elif len(symbolic_weight.shape) > len(array.shape):
array = numpy.expand_dims(array, axis=0)
if list(symbolic_weight.shape) != list(array.shape):
try:
array = numpy.reshape(array, symbolic_weight.shape)
except AssertionError as e:
e.args += (symbolic_weight.shape, array.shape)
raise e
try:
assert list(symbolic_weight.shape) == list(array.shape)
except AssertionError as e:
e.args += (symbolic_weight.shape, array.shape)
raise e
tf_loaded_numel += array.size
# logger.warning(f"Initialize TF weight {symbolic_weight.name}")
weight_value_tuples.append((symbolic_weight, array))
all_pytorch_weights.discard(name)
K.batch_set_value(weight_value_tuples)
if tf_inputs is not None:
tf_model(tf_inputs, training=False) # Make sure restore ops are run
logger.info(f"Loaded {tf_loaded_numel:,} parameters in the TF 2.0 model.")
unexpected_keys = list(all_pytorch_weights)
if tf_model._keys_to_ignore_on_load_missing is not None:
for pat in tf_model._keys_to_ignore_on_load_missing:
missing_keys = [k for k in missing_keys if re.search(pat, k) is None]
if tf_model._keys_to_ignore_on_load_unexpected is not None:
for pat in tf_model._keys_to_ignore_on_load_unexpected:
unexpected_keys = [k for k in unexpected_keys if re.search(pat, k) is None]
if len(unexpected_keys) > 0:
logger.warning(
f"Some weights of the PyTorch model were not used when "
f"initializing the TF 2.0 model {tf_model.__class__.__name__}: {unexpected_keys}\n"
f"- This IS expected if you are initializing {tf_model.__class__.__name__} from a PyTorch model trained on another task "
f"or with another architecture (e.g. initializing a TFBertForSequenceClassification model from a BertForPreTraining model).\n"
f"- This IS NOT expected if you are initializing {tf_model.__class__.__name__} from a PyTorch model that you expect "
f"to be exactly identical (e.g. initializing a TFBertForSequenceClassification model from a BertForSequenceClassification model)."
)
else:
logger.warning(f"All PyTorch model weights were used when initializing {tf_model.__class__.__name__}.\n")
if len(missing_keys) > 0:
logger.warning(
f"Some weights or buffers of the TF 2.0 model {tf_model.__class__.__name__} were not initialized from the PyTorch model "
f"and are newly initialized: {missing_keys}\n"
f"You should probably TRAIN this model on a down-stream task to be able to use it for predictions and inference."
)
else:
logger.warning(
f"All the weights of {tf_model.__class__.__name__} were initialized from the PyTorch model.\n"
f"If your task is similar to the task the model of the checkpoint was trained on, "
f"you can already use {tf_model.__class__.__name__} for predictions without further training."
)
return tf_model
#####################
# TF 2.0 => PyTorch #
#####################
def load_tf2_checkpoint_in_pytorch_model(pt_model, tf_checkpoint_path, tf_inputs=None, allow_missing_keys=False):
"""
Load TF 2.0 HDF5 checkpoint in a PyTorch model We use HDF5 to easily do transfer learning (see
https://github.com/tensorflow/tensorflow/blob/ee16fcac960ae660e0e4496658a366e2f745e1f0/tensorflow/python/keras/engine/network.py#L1352-L1357).
"""
try:
import tensorflow as tf # noqa: F401
import torch # noqa: F401
except ImportError:
logger.error(
"Loading a TensorFlow model in PyTorch, requires both PyTorch and TensorFlow to be installed. Please see "
"https://pytorch.org/ and https://www.tensorflow.org/install/ for installation instructions."
)
raise
import transformers
from .modeling_tf_utils import load_tf_weights
logger.info(f"Loading TensorFlow weights from {tf_checkpoint_path}")
# Instantiate and load the associated TF 2.0 model
tf_model_class_name = "TF" + pt_model.__class__.__name__ # Add "TF" at the beginning
tf_model_class = getattr(transformers, tf_model_class_name)
tf_model = tf_model_class(pt_model.config)
if tf_inputs is None:
tf_inputs = tf_model.dummy_inputs
if tf_inputs is not None:
tf_model(tf_inputs, training=False) # Make sure model is built
load_tf_weights(tf_model, tf_checkpoint_path)
return load_tf2_model_in_pytorch_model(pt_model, tf_model, allow_missing_keys=allow_missing_keys)
def load_tf2_model_in_pytorch_model(pt_model, tf_model, allow_missing_keys=False):
"""Load TF 2.0 model in a pytorch model"""
weights = tf_model.weights
return load_tf2_weights_in_pytorch_model(pt_model, weights, allow_missing_keys=allow_missing_keys)
def load_tf2_weights_in_pytorch_model(pt_model, tf_weights, allow_missing_keys=False):
"""Load TF2.0 symbolic weights in a PyTorch model"""
try:
import tensorflow as tf # noqa: F401
import torch # noqa: F401
except ImportError:
logger.error(
"Loading a TensorFlow model in PyTorch, requires both PyTorch and TensorFlow to be installed. Please see "
"https://pytorch.org/ and https://www.tensorflow.org/install/ for installation instructions."
)
raise
new_pt_params_dict = {}
current_pt_params_dict = dict(pt_model.named_parameters())
# Make sure we are able to load PyTorch base models as well as derived models (with heads)
# TF models always have a prefix, some of PyTorch models (base ones) don't
start_prefix_to_remove = ""
if not any(s.startswith(pt_model.base_model_prefix) for s in current_pt_params_dict.keys()):
start_prefix_to_remove = pt_model.base_model_prefix + "."
# Build a map from potential PyTorch weight names to TF 2.0 Variables
tf_weights_map = {}
for tf_weight in tf_weights:
pt_name, transpose = convert_tf_weight_name_to_pt_weight_name(
tf_weight.name, start_prefix_to_remove=start_prefix_to_remove, tf_weight_shape=tf_weight.shape
)
tf_weights_map[pt_name] = (tf_weight.numpy(), transpose)
all_tf_weights = set(list(tf_weights_map.keys()))
loaded_pt_weights_data_ptr = {}
missing_keys_pt = []
for pt_weight_name, pt_weight in current_pt_params_dict.items():
# Handle PyTorch shared weight ()not duplicated in TF 2.0
if pt_weight.data_ptr() in loaded_pt_weights_data_ptr:
new_pt_params_dict[pt_weight_name] = loaded_pt_weights_data_ptr[pt_weight.data_ptr()]
continue
# Find associated numpy array in pytorch model state dict
if pt_weight_name not in tf_weights_map:
if allow_missing_keys:
missing_keys_pt.append(pt_weight_name)
continue
raise AttributeError(f"{pt_weight_name} not found in TF 2.0 model")
array, transpose = tf_weights_map[pt_weight_name]
if transpose is TransposeType.CONV2D:
# Conv2D weight:
# TF: (kernel[0], kernel[1], num_in_channel, num_out_channel)
# -> PT: (num_out_channel, num_in_channel, kernel[0], kernel[1])
array = numpy.transpose(array, axes=(3, 2, 0, 1))
elif transpose is TransposeType.CONV1D:
# Conv1D weight:
# TF: (kernel, num_in_channel, num_out_channel)
# -> PT: (num_out_channel, num_in_channel, kernel)
array = numpy.transpose(array, axes=(2, 1, 0))
elif transpose is TransposeType.SIMPLE:
array = numpy.transpose(array)
if len(pt_weight.shape) < len(array.shape):
array = numpy.squeeze(array)
elif len(pt_weight.shape) > len(array.shape):
array = numpy.expand_dims(array, axis=0)
if list(pt_weight.shape) != list(array.shape):
try:
array = numpy.reshape(array, pt_weight.shape)
except AssertionError as e:
e.args += (pt_weight.shape, array.shape)
raise e
try:
assert list(pt_weight.shape) == list(array.shape)
except AssertionError as e:
e.args += (pt_weight.shape, array.shape)
raise e
# logger.warning(f"Initialize PyTorch weight {pt_weight_name}")
# Make sure we have a proper numpy array
if numpy.isscalar(array):
array = numpy.array(array)
new_pt_params_dict[pt_weight_name] = torch.from_numpy(array)
loaded_pt_weights_data_ptr[pt_weight.data_ptr()] = torch.from_numpy(array)
all_tf_weights.discard(pt_weight_name)
missing_keys, unexpected_keys = pt_model.load_state_dict(new_pt_params_dict, strict=False)
missing_keys += missing_keys_pt
# Some models may have keys that are not in the state by design, removing them before needlessly warning
# the user.
if pt_model._keys_to_ignore_on_load_missing is not None:
for pat in pt_model._keys_to_ignore_on_load_missing:
missing_keys = [k for k in missing_keys if re.search(pat, k) is None]
if pt_model._keys_to_ignore_on_load_unexpected is not None:
for pat in pt_model._keys_to_ignore_on_load_unexpected:
unexpected_keys = [k for k in unexpected_keys if re.search(pat, k) is None]
if len(unexpected_keys) > 0:
logger.warning(
f"Some weights of the TF 2.0 model were not used when "
f"initializing the PyTorch model {pt_model.__class__.__name__}: {unexpected_keys}\n"
f"- This IS expected if you are initializing {pt_model.__class__.__name__} from a TF 2.0 model trained on another task "
f"or with another architecture (e.g. initializing a BertForSequenceClassification model from a TFBertForPreTraining model).\n"
f"- This IS NOT expected if you are initializing {pt_model.__class__.__name__} from a TF 2.0 model that you expect "
f"to be exactly identical (e.g. initializing a BertForSequenceClassification model from a TFBertForSequenceClassification model)."
)
else:
logger.warning(f"All TF 2.0 model weights were used when initializing {pt_model.__class__.__name__}.\n")
if len(missing_keys) > 0:
logger.warning(
f"Some weights of {pt_model.__class__.__name__} were not initialized from the TF 2.0 model "
f"and are newly initialized: {missing_keys}\n"
f"You should probably TRAIN this model on a down-stream task to be able to use it for predictions and inference."
)
else:
logger.warning(
f"All the weights of {pt_model.__class__.__name__} were initialized from the TF 2.0 model.\n"
f"If your task is similar to the task the model of the checkpoint was trained on, "
f"you can already use {pt_model.__class__.__name__} for predictions without further training."
)
logger.info(f"Weights or buffers not loaded from TF 2.0 model: {all_tf_weights}")
return pt_model
| 19,939 | 42.442266 | 146 | py |
robust-transformers | robust-transformers-main/src/transformers/trainer_slicer.py | """
The Trainer class, to train a group classifier using learned features of the model.
"""
import contextlib
import inspect
import math
import os
from attr import dataclass
import pandas as pd
from pandas import DataFrame
import random
import re
import shutil
import sys
import time
import warnings
from collections.abc import Mapping
from pathlib import Path
from typing import TYPE_CHECKING, Any, Callable, Dict, List, Optional, Tuple, Union
import wandb
from tqdm.auto import tqdm
# Integrations must be imported before ML frameworks:
from .integrations import ( # isort: split
default_hp_search_backend,
get_reporting_integration_callbacks,
hp_params,
is_fairscale_available,
is_optuna_available,
is_ray_tune_available,
is_sigopt_available,
is_wandb_available,
run_hp_search_optuna,
run_hp_search_ray,
run_hp_search_sigopt,
run_hp_search_wandb,
)
import numpy as np
import torch
from packaging import version
from torch import Tensor, nn
from torch.utils.data import DataLoader, Dataset, RandomSampler, SequentialSampler, BatchSampler
from torch.utils.data.distributed import DistributedSampler
from torch.utils.data.sampler import WeightedRandomSampler
from huggingface_hub import Repository
from . import __version__
from .configuration_utils import PretrainedConfig
from .data.data_collator import DataCollator, DataCollatorWithPadding, default_data_collator
from .debug_utils import DebugOption, DebugUnderflowOverflow
from .deepspeed import deepspeed_init, deepspeed_reinit, is_deepspeed_zero3_enabled
from .dependency_versions_check import dep_version_check
from .file_utils import (
CONFIG_NAME,
WEIGHTS_NAME,
get_full_repo_name,
is_apex_available,
is_datasets_available,
is_in_notebook,
is_sagemaker_dp_enabled,
is_sagemaker_mp_enabled,
is_torch_tpu_available,
)
from .modelcard import TrainingSummary
from .modeling_utils import PreTrainedModel, unwrap_model
from .models.auto.modeling_auto import MODEL_FOR_QUESTION_ANSWERING_MAPPING_NAMES
from .optimization import Adafactor, get_scheduler
from .tokenization_utils_base import PreTrainedTokenizerBase
from .trainer_callback import (
CallbackHandler,
DefaultFlowCallback,
PrinterCallback,
ProgressCallback,
TrainerCallback,
TrainerControl,
TrainerState,
)
from .trainer_pt_utils import (
DistributedLengthGroupedSampler,
DistributedSamplerWithLoop,
DistributedTensorGatherer,
IterableDatasetShard,
LabelSmoother,
LengthGroupedSampler,
SequentialDistributedSampler,
ShardSampler,
distributed_broadcast_scalars,
distributed_concat,
find_batch_size,
get_parameter_names,
nested_concat,
nested_detach,
nested_numpify,
nested_truncate,
nested_xla_mesh_reduce,
reissue_pt_warnings,
)
from .trainer import Trainer
from .trainer_utils import (
PREFIX_CHECKPOINT_DIR,
BestRun,
EvalLoopOutput,
EvalPrediction,
HPSearchBackend,
HubStrategy,
IntervalStrategy,
PredictionOutput,
ShardedDDPOption,
TrainerMemoryTracker,
TrainOutput,
default_compute_objective,
default_hp_space,
denumpify_detensorize,
get_last_checkpoint,
has_length,
number_of_arguments,
set_seed,
speed_metrics,
)
from .training_args import OptimizerNames, ParallelMode
from .domino_training_args import DominoTrainingArguments
from .utils import logging
from .dro_loss import LossComputer, DroArguments
_is_native_amp_available = False
DEFAULT_CALLBACKS = [DefaultFlowCallback]
DEFAULT_PROGRESS_CALLBACK = ProgressCallback
if is_in_notebook():
from .utils.notebook import NotebookProgressCallback
DEFAULT_PROGRESS_CALLBACK = NotebookProgressCallback
if is_apex_available():
from apex import amp
if version.parse(torch.__version__) >= version.parse("1.6"):
_is_torch_generator_available = True
_is_native_amp_available = True
from torch.cuda.amp import autocast
if is_datasets_available():
import datasets
if is_torch_tpu_available():
import torch_xla.core.xla_model as xm
import torch_xla.debug.metrics as met
import torch_xla.distributed.parallel_loader as pl
if is_fairscale_available():
dep_version_check("fairscale")
import fairscale
from fairscale.nn.data_parallel import FullyShardedDataParallel as FullyShardedDDP
from fairscale.nn.data_parallel import ShardedDataParallel as ShardedDDP
from fairscale.nn.wrap import auto_wrap
from fairscale.optim import OSS
from fairscale.optim.grad_scaler import ShardedGradScaler
if is_sagemaker_dp_enabled():
import smdistributed.dataparallel.torch.distributed as dist
from smdistributed.dataparallel.torch.parallel.distributed import DistributedDataParallel as DDP
else:
import torch.distributed as dist
if is_sagemaker_mp_enabled():
import smdistributed.modelparallel.torch as smp
from .trainer_pt_utils import smp_forward_backward, smp_forward_only, smp_gather, smp_nested_concat
if TYPE_CHECKING:
import optuna
logger = logging.get_logger(__name__)
# Name of the files used for checkpointing
TRAINING_ARGS_NAME = "training_args.bin"
TRAINER_STATE_NAME = "trainer_state.json"
OPTIMIZER_NAME = "optimizer.pt"
SCHEDULER_NAME = "scheduler.pt"
SCALER_NAME = "scaler.pt"
class TrainerSlicer(Trainer):
from .trainer_pt_utils import _get_learning_rate, log_metrics, metrics_format, save_metrics, save_state
def __init__(
self,
model: Union[PreTrainedModel, nn.Module] = None,
args: DominoTrainingArguments = None,
dro_args: DroArguments = None,
data_collator: Optional[DataCollator] = None,
train_dataset: Optional[Dataset] = None,
eval_dataset: Optional[Dataset] = None,
train_features: Optional[DataFrame] = None,
eval_features: Optional[DataFrame] = None,
tokenizer: Optional[PreTrainedTokenizerBase] = None,
compute_metrics: Optional[Callable[[EvalPrediction], Dict]] = None,
callbacks: Optional[List[TrainerCallback]] = None,
optimizers: Tuple[torch.optim.Optimizer, torch.optim.lr_scheduler.LambdaLR] = (None, None)
):
self.args = args
set_seed(self.args.seed)
self.hp_name = None
self.deepspeed = None
self.is_in_train = False
# memory metrics - must set up as early as possible
self._memory_tracker = TrainerMemoryTracker(self.args.skip_memory_metrics)
self._memory_tracker.start()
# set the correct log level depending on the node
log_level = args.get_process_log_level()
logging.set_verbosity(log_level)
# force device and distributed setup init explicitly
args._setup_devices
if hasattr(model, "is_parallelizable") and model.is_parallelizable and model.model_parallel:
self.is_model_parallel = True
else:
self.is_model_parallel = False
# Setup Sharded DDP training
# TODO: Add sharded_ddp for multiGPU training.
self.sharded_ddp = None
default_collator = default_data_collator if tokenizer is None else DataCollatorWithPadding(tokenizer)
self.data_collator = data_collator if data_collator is not None else default_collator
self.train_dataset = train_dataset
self.eval_dataset = eval_dataset
self.train_features = train_features
self.eval_features = eval_features
self.tokenizer = tokenizer
self.place_model_on_device = args.place_model_on_device
if self.place_model_on_device:
self._move_model_to_device(model, args.device)
# Force n_gpu to 1 to avoid DataParallel as MP will manage the GPUs
if self.is_model_parallel:
self.args._n_gpu = 1
# later use `self.model is self.model_wrapped` to check if it's wrapped or not
self.model_wrapped = model
self.model = model
self.compute_metrics = compute_metrics
self.preprocess_logits_for_metrics = None
if self.args.should_save:
os.makedirs(self.args.output_dir, exist_ok=True)
# Optimizers and lr_schedulers
self.optimizer, self.lr_scheduler = optimizers
# Callbacks
default_callbacks = DEFAULT_CALLBACKS + get_reporting_integration_callbacks(self.args.report_to)
callbacks = default_callbacks if callbacks is None else default_callbacks + callbacks
self.callback_handler = CallbackHandler(
callbacks, self.model, self.tokenizer, self.optimizer, self.lr_scheduler
)
self.add_callback(PrinterCallback if self.args.disable_tqdm else DEFAULT_PROGRESS_CALLBACK)
self._signature_columns = None
# Mixed precision setup
self.use_apex = False
self.use_amp = False
self.do_grad_scaling = False
# Label smoothing
if self.args.label_smoothing_factor != 0:
self.label_smoother = LabelSmoother(epsilon=self.args.label_smoothing_factor)
else:
self.label_smoother = None
self.state = TrainerState()
self.control = TrainerControl()
# Internal variable to count flos in each process, will be accumulated in `self.state.total_flos` then
# returned to 0 every time flos need to be logged
self.current_flos = 0
self.hp_search_backend = None
self.use_tune_checkpoints = False
default_label_names = (
["start_positions", "end_positions"]
if type(self.model).__name__ in MODEL_FOR_QUESTION_ANSWERING_MAPPING_NAMES.values()
else ["labels"]
)
self.label_names = default_label_names if self.args.label_names is None else self.args.label_names
self.control = self.callback_handler.on_init_end(self.args, self.state, self.control)
# very last
self._memory_tracker.stop_and_update_metrics()
self.dro_args = dro_args
self._add_columns()
def add_callback(self, callback):
self.callback_handler.add_callback(callback)
def _move_model_to_device(self, model, device):
model = model.to(device)
# Moving a model to an XLA device disconnects the tied weights, so we have to retie them.
if self.args.parallel_mode == ParallelMode.TPU and hasattr(model, "tie_weights"):
model.tie_weights()
def num_examples(self, dataloader: DataLoader) -> int:
return len(dataloader.dataset)
def log_training_dynamics(self, output_dir: os.path,
epoch: int,
train_ids: List[int],
train_logits: List[List[float]],
train_golds: List[int]):
"""
Save training dynamics (logits) from given epoch as records of a `.jsonl` file.
"""
td_df = pd.DataFrame({"guid": train_ids,
f"logits_epoch_{epoch}": train_logits,
"gold": train_golds})
logging_dir = os.path.join(output_dir, f"training_dynamics")
# Create directory for logging training dynamics, if it doesn't already exist.
if not os.path.exists(logging_dir):
os.makedirs(logging_dir)
epoch_file_name = os.path.join(logging_dir, f"dynamics_epoch_{epoch}.jsonl")
td_df.to_json(epoch_file_name, lines=True, orient="records")
logger.info(f"Training Dynamics logged to {epoch_file_name}")
def log_dro_dynamics(self, output_dir: os.path,
epochs: List[int],
iterations: List[int],
group_probs: List[List[float]],
group_losses: List[List[float]],
group_counts: List[List[float]],
):
td_df = pd.DataFrame({"epoch": epochs,
f"iteration": iterations,
"group_weight": group_probs,
"group_loss": group_losses,
"group_counts": group_counts})
logging_dir = os.path.join(output_dir, f"dro_dynamics")
# Create directory for logging training dynamics, if it doesn't already exist.
if not os.path.exists(logging_dir):
os.makedirs(logging_dir)
epoch_file_name = os.path.join(logging_dir, f"dro_dynamics.jsonl")
td_df.to_json(epoch_file_name, lines=True, orient="records")
logger.info(f"Training Dynamics logged to {epoch_file_name}")
def train(
self,
resume_from_checkpoint: Optional[Union[str, bool]] = None,
trial: Union["optuna.Trial", Dict[str, Any]] = None,
ignore_keys_for_eval: Optional[List[str]] = None,
**kwargs,
):
# memory metrics - must set up as early as possible
self._memory_tracker.start()
args = self.args
self.is_in_train = True
# does the model need to be reloaded.
# Keeping track whether we can len() on the dataset or not
train_dataset_is_sized = has_length(self.train_dataset)
# Data loader and number of training steps
train_dataloader = self.get_train_dataloader()
# Setting up training control variables:
# number of training epochs: num_train_epochs
# number of training steps per epoch: num_update_steps_per_epoch
# total number of training steps to execute: max_steps
total_train_batch_size = args.train_batch_size * args.gradient_accumulation_steps * args.world_size
if train_dataset_is_sized:
num_update_steps_per_epoch = len(train_dataloader) // args.gradient_accumulation_steps
num_update_steps_per_epoch = max(num_update_steps_per_epoch, 1)
if args.max_steps > 0:
max_steps = args.max_steps
num_train_epochs = args.max_steps // num_update_steps_per_epoch + int(
args.max_steps % num_update_steps_per_epoch > 0
)
# May be slightly incorrect if the last batch in the training datalaoder has a smaller size but it's
# the best we can do.
num_train_samples = args.max_steps * total_train_batch_size
else:
max_steps = math.ceil(args.num_train_epochs * num_update_steps_per_epoch)
num_train_epochs = math.ceil(args.num_train_epochs)
num_train_samples = len(self.train_dataset) * args.num_train_epochs
else:
# see __init__. max_steps is set when the dataset has no __len__
max_steps = args.max_steps
# Setting a very large number of epochs so we go as many times as necessary over the iterator.
num_train_epochs = sys.maxsize
num_update_steps_per_epoch = max_steps
num_train_samples = args.max_steps * total_train_batch_size
if DebugOption.UNDERFLOW_OVERFLOW in self.args.debug:
if self.args.n_gpu > 1:
# nn.DataParallel(model) replicates the model, creating new variables and module
# references registered here no longer work on other gpus, breaking the module
raise ValueError(
"Currently --debug underflow_overflow is not supported under DP. Please use DDP (torch.distributed.launch)."
)
else:
debug_overflow = DebugUnderflowOverflow(self.model) # noqa
self.create_optimizer_and_scheduler(num_training_steps=max_steps)
self.state = TrainerState()
self.state.is_hyper_param_search = trial is not None
# Activate gradient checkpointing if needed
if args.gradient_checkpointing:
self.model.gradient_checkpointing_enable()
model = self._wrap_model(self.model_wrapped)
# Check if saved optimizer or scheduler states exist
self._load_optimizer_and_scheduler(resume_from_checkpoint)
# Train!
num_examples = (
self.num_examples(train_dataloader) if train_dataset_is_sized else total_train_batch_size * args.max_steps
)
logger.info("***** Running training *****")
logger.info(f" Num examples = {num_examples}")
logger.info(f" Num Epochs = {num_train_epochs}")
logger.info(f" Instantaneous batch size per device = {args.per_device_train_batch_size}")
logger.info(f" Total train batch size (w. parallel, distributed & accumulation) = {total_train_batch_size}")
logger.info(f" Gradient Accumulation steps = {args.gradient_accumulation_steps}")
logger.info(f" Total optimization steps = {max_steps}")
self.state.epoch = 0
start_time = time.time()
epochs_trained = 0
steps_trained_in_current_epoch = 0
steps_trained_progress_bar = None
# Update the references
self.callback_handler.model = self.model
self.callback_handler.optimizer = self.optimizer
self.callback_handler.lr_scheduler = self.lr_scheduler
self.callback_handler.train_dataloader = train_dataloader
self.state.trial_name = self.hp_name(trial) if self.hp_name is not None else None
if trial is not None:
assignments = trial.assignments if self.hp_search_backend == HPSearchBackend.SIGOPT else trial
self.state.trial_params = hp_params(assignments)
else:
self.state.trial_params = None
# This should be the same if the state has been saved but in case the training arguments changed, it's safer
# to set this after the load.
self.state.max_steps = max_steps
self.state.num_train_epochs = num_train_epochs
self.state.is_local_process_zero = self.is_local_process_zero()
self.state.is_world_process_zero = self.is_world_process_zero()
# tr_loss is a tensor to avoid synchronization of TPUs through .item()
tr_loss_primary = torch.tensor(0.0).to(args.device)
tr_loss_adversary = torch.tensor(0.0).to(args.device)
# _total_loss_scalar is updated everytime .item() has to be called on tr_loss and stores the sum of all losses
self._total_loss_scalar = 0.0
self._globalstep_last_logged = self.state.global_step
model.zero_grad()
self.control = self.callback_handler.on_train_begin(args, self.state, self.control)
# Skip the first epochs_trained epochs to get the random state of the dataloader at the right point.
if not args.ignore_data_skip:
for epoch in range(epochs_trained):
# We just need to begin an iteration to create the randomization of the sampler.
for _ in train_dataloader:
break
# Create dro dynamics variable.
epoch_list = []
iteration_list = []
group_assignment_list = []
group_loss_list = []
group_count_list = []
# Book-keeping for model selection
worst_valid_acc = None
valid_acc = None
bad_counts = 0
resplit_train_epoch = 0
for epoch in range(epochs_trained, num_train_epochs):
if isinstance(train_dataloader, DataLoader) and isinstance(train_dataloader.sampler, DistributedSampler):
train_dataloader.sampler.set_epoch(epoch)
elif isinstance(train_dataloader.dataset, IterableDatasetShard):
train_dataloader.dataset.set_epoch(epoch)
epoch_iterator = train_dataloader
# Reset the past mems state at the beginning of each epoch if necessary.
if args.past_index >= 0:
self._past = None
steps_in_epoch = (
len(epoch_iterator) if train_dataset_is_sized else args.max_steps * args.gradient_accumulation_steps
)
self.control = self.callback_handler.on_epoch_begin(args, self.state, self.control)
step = -1
# if adversary_warmup is set to X iterations, altrenate between training the adversary and primary for that many number of iterations
for step, inputs in enumerate(epoch_iterator):
if steps_trained_progress_bar is not None:
steps_trained_progress_bar.close()
steps_trained_progress_bar = None
if step % args.gradient_accumulation_steps == 0:
self.control = self.callback_handler.on_step_begin(args, self.state, self.control)
# Primary
tr_loss_step_primary = torch.tensor(0.0).to(args.device)
if epoch >= args.adversary_warmup:
if (
((step + 1) % args.gradient_accumulation_steps != 0)
and args.local_rank != -1
and args._no_sync_in_gradient_accumulation
):
# Avoid unnecessary DDP synchronization since there will be no backward pass on this example.
with model.no_sync():
tr_loss_step_primary, batch_logits = self.training_step_primary(model, inputs)
else:
tr_loss_step_primary, batch_logits = self.training_step_primary(model, inputs)
# Adversary (which is only trained for some X number of epochs before not being used anymore)
# adversary warmup os for the number of epochs to train the adversary before not using it anymore.
if (args.adversary_warmup) == -1 or epoch < args.adversary_warmup: # and self.state.global_step < 3300:
if (
((step + 1) % args.gradient_accumulation_steps != 0)
and args.local_rank != -1
and args._no_sync_in_gradient_accumulation
):
# Avoid unnecessary DDP synchronization since there will be no backward pass on this example.
with model.no_sync():
tr_loss_step_adversary, batch_logits = self.training_step_adversary(model, inputs)
else:
tr_loss_step_adversary, batch_logits = self.training_step_adversary(model, inputs)
# execute this if not doig parallel training
# wandb.log({"primary loss": tr_loss_step_primary.item()})
# wandb.log({"adversary loss": tr_loss_step_adversary.item()})
if (
args.logging_nan_inf_filter
and not is_torch_tpu_available()
and (torch.isnan(tr_loss_step_primary) or torch.isinf(tr_loss_step_primary))
):
# if loss is nan or inf simply add the average of previous logged losses
tr_loss_primary += tr_loss_primary / (1 + self.state.global_step - self._globalstep_last_logged)
else:
tr_loss_primary += tr_loss_step_primary
if (
args.logging_nan_inf_filter
and not is_torch_tpu_available()
and (torch.isnan(tr_loss_step_adversary) or torch.isinf(tr_loss_step_adversary))
):
# if loss is nan or inf simply add the average of previous logged losses
tr_loss_adversary += tr_loss_adversary / (1 + self.state.global_step - self._globalstep_last_logged)
else:
tr_loss_adversary += tr_loss_step_adversary
self.current_flos += float(self.floating_point_ops(inputs))
if (step + 1) % args.gradient_accumulation_steps == 0 or (
# last step in epoch but step is always smaller than gradient_accumulation_steps
steps_in_epoch <= args.gradient_accumulation_steps
and (step + 1) == steps_in_epoch
):
# Gradient clipping
if args.max_grad_norm is not None and args.max_grad_norm > 0 and not self.deepspeed:
# deepspeed does its own clipping
if self.do_grad_scaling:
# Reduce gradients first for XLA
if is_torch_tpu_available():
gradients = xm._fetch_gradients(self.optimizer)
xm.all_reduce("sum", gradients, scale=1.0 / xm.xrt_world_size())
# AMP: gradients need unscaling
self.scaler.unscale_(self.optimizer)
if hasattr(self.optimizer, "clip_grad_norm"):
# Some optimizers (like the sharded optimizer) have a specific way to do gradient clipping
self.optimizer.clip_grad_norm(args.max_grad_norm)
elif hasattr(model, "clip_grad_norm_"):
# Some models (like FullyShardedDDP) have a specific way to do gradient clipping
model.clip_grad_norm_(args.max_grad_norm)
else:
# Revert to normal clipping otherwise, handling Apex or full precision
nn.utils.clip_grad_norm_(
amp.master_params(self.optimizer) if self.use_apex else model.parameters(),
args.max_grad_norm,
)
# Optimizer step
optimizer_was_run = True
if self.deepspeed:
pass # called outside the loop
elif is_torch_tpu_available():
if self.do_grad_scaling:
self.scaler.step(self.optimizer)
self.scaler.update()
else:
xm.optimizer_step(self.optimizer)
elif self.do_grad_scaling:
scale_before = self.scaler.get_scale()
self.scaler.step(self.optimizer)
self.scaler.update()
scale_after = self.scaler.get_scale()
optimizer_was_run = scale_before <= scale_after
else:
self.optimizer.step()
if optimizer_was_run and not self.deepspeed:
self.lr_scheduler.step()
model.zero_grad()
self.state.global_step += 1
self.state.epoch = epoch + (step + 1) / steps_in_epoch
self.control = self.callback_handler.on_step_end(args, self.state, self.control)
# Just log, and save checkpoints, dont evaluate.
_ = self._maybe_log_save_evaluate(tr_loss_primary, model, trial, epoch, ignore_keys_for_eval, evaluate=False)
if self.dro_args.is_robust and self.state.global_step % self.args.logging_steps == 0:
model.module.log_stats(logger, True)
self.log(model.module.get_stats(model, args))
iteration_list.append(step)
epoch_list.append(epoch)
group_assignment_list.append(list(model.module.adv_probs.cpu().numpy()))
group_loss_list.append(list(model.module.group_loss.detach().cpu().numpy()))
group_count_list.append(list(model.module.processed_data_counts.detach().cpu().numpy()))
# add group count.
# there is a mismatch between Chunting's code where reset happens only after 1 epoch.
# self.train_loss_computer.reset_stats()
else:
self.control = self.callback_handler.on_substep_end(args, self.state, self.control)
if self.control.should_epoch_stop or self.control.should_training_stop:
break
# End of epoch, reset train loss computer.
if self.dro_args.is_robust and model.module.batch_count > 0:
model.module.log_stats(logger, True)
self.log(model.module.get_stats(model, args))
model.module.reset_stats()
"""
if self.dro_args.robust_algorithm == "GCDRO":
self._update_columns(epoch=epoch) #, dataloader=epoch_iterator)
# update epoch iterator, since instance weights are being changed in self.train_dataset
train_dataloader = self.get_train_dataloader()
if is_torch_tpu_available():
parallel_loader = pl.ParallelLoader(train_dataloader, [args.device]).per_device_loader(args.device)
epoch_iterator = parallel_loader
else:
epoch_iterator = train_dataloader
"""
# End of epoch
if step < 0:
logger.warning(
f"There seems to be not a single sample in your epoch_iterator, stopping training at step"
f" {self.state.global_step}! This is expected if you're using an IterableDataset and set"
f" num_steps ({max_steps}) higher than the number of available samples."
)
self.control.should_training_stop = True
self.control = self.callback_handler.on_epoch_end(args, self.state, self.control)
# this is going to save but only after its worst accuracy has been computed.
# only start to evaluate, when you are no longer training the adversary model
if epoch >= args.adversary_warmup:
metrics = self._maybe_log_save_evaluate(tr_loss_primary, model, trial, epoch, ignore_keys_for_eval, evaluate=True)
# Training stopping criterion
become_better = False
if self.dro_args.is_robust and args.metric_for_best_model == "eval_worst_accuracy":
resplit_train_epoch += 1
if self.args.select_predicted_worst_group:
valid_group_acc = [(int(key.lstrip("eval_megagroup_accuracy_")), metrics[key]) for key in metrics.keys() if key.startswith("eval_megagroup_accuracy")]
else:
valid_group_acc = [(int(key.lstrip("eval_group_accuracy_")), metrics[key]) for key in metrics.keys() if key.startswith("eval_group_accuracy")]
curr_worst_valid_acc = min([acc for _, acc in valid_group_acc])
sorted_by_group_id = sorted(valid_group_acc, key=lambda tup: tup[0])
group_acc = " ".join(["%d: %.3f" % (idx, acc if acc > 0 else -acc) for idx, acc in sorted_by_group_id])
become_better = (worst_valid_acc is not None and curr_worst_valid_acc > worst_valid_acc) or worst_valid_acc is None
worst_valid_acc = curr_worst_valid_acc if worst_valid_acc is None else max(curr_worst_valid_acc, worst_valid_acc)
bad_counts = 0 if become_better else bad_counts + 1
logger.info("Valid group performance: {}".format(group_acc))
logger.info("Better worst valid = {}, bad counts = {}, worst acc = {}".format(become_better, bad_counts, curr_worst_valid_acc))
# Update metrics (best_worst_group)
metrics["eval_worst_accuracy"] = worst_valid_acc
else:
# Even with robust training, this code will get triggered.
current_valid_acc = metrics["eval_accuracy"]
become_better = (valid_acc is not None and current_valid_acc > valid_acc) or valid_acc is None
valid_acc = current_valid_acc if valid_acc is None else max(current_valid_acc, valid_acc)
bad_counts = 0 if become_better else bad_counts + 1
logger.info("Valid performance: {}".format(current_valid_acc))
logger.info("Better valid = {}, bad counts = {}, best acc = {}".format(become_better, bad_counts, current_valid_acc))
# Model selection (save checkpoint with best worst_accuracy as the "best_" checkpoint)
if become_better:
# First time worst_accuracy is computed, or worst accuracy improved.
self._save_checkpoint(model, trial, metrics=metrics, save_best=True)
if self.control.should_training_stop:
break
# End of training
# Dump dro group assignments to file.
self.log_dro_dynamics(output_dir=args.output_dir, epochs=epoch_list, iterations=iteration_list, group_probs=group_assignment_list, group_losses=group_loss_list, group_counts=group_count_list)
if args.past_index and hasattr(self, "_past"):
# Clean the state at the end of training
delattr(self, "_past")
logger.info("\n\nTraining completed. Do not forget to share your model on huggingface.co/models =)\n\n")
if args.load_best_model_at_end and self.state.best_model_checkpoint is not None:
# Wait for everyone to get here so we are sur the model has been saved by process 0.
if is_torch_tpu_available():
xm.rendezvous("load_best_model_at_end")
elif args.local_rank != -1:
dist.barrier()
logger.info(
f"Loading best model from {self.state.best_model_checkpoint} (score: {self.state.best_metric})."
)
best_model_path = os.path.join(self.state.best_model_checkpoint, WEIGHTS_NAME)
if os.path.exists(best_model_path):
if self.deepspeed:
# temp hack until Deepspeed fixes the problem with resume from an existing engine that did some stepping
deepspeed_engine, optimizer, lr_scheduler = deepspeed_reinit(self)
self.model = deepspeed_engine.module
self.model_wrapped = deepspeed_engine
self.deepspeed = deepspeed_engine
self.optimizer = optimizer
self.lr_scheduler = lr_scheduler
self.deepspeed.load_checkpoint(
self.state.best_model_checkpoint, load_optimizer_states=True, load_lr_scheduler_states=True
)
else:
# We load the model state dict on the CPU to avoid an OOM error.
state_dict = torch.load(best_model_path, map_location="cpu")
# If the model is on the GPU, it still works!
self._load_state_dict_in_model(state_dict)
else:
logger.warning(
f"Could not locate the best model at {best_model_path}, if you are running a distributed training "
"on multiple nodes, you should activate `--save_on_each_node`."
)
# add remaining tr_loss
self._total_loss_scalar += tr_loss_primary.item()
train_loss = self._total_loss_scalar / self.state.global_step
metrics = speed_metrics("train", start_time, num_samples=num_train_samples, num_steps=self.state.max_steps)
self.store_flos()
metrics["total_flos"] = self.state.total_flos
metrics["train_loss"] = train_loss
self.is_in_train = False
self._memory_tracker.stop_and_update_metrics(metrics)
self.log(metrics)
self.control = self.callback_handler.on_train_end(args, self.state, self.control)
return TrainOutput(self.state.global_step, train_loss, metrics)
def _load_state_dict_in_model(self, state_dict):
load_result = self.model.task_model.load_state_dict(state_dict, strict=False)
if len(load_result.missing_keys) != 0:
if self.model.task_model._keys_to_ignore_on_save is not None and set(load_result.missing_keys) == set(
self.model.task_model._keys_to_ignore_on_save
):
self.model.task_model.tie_weights()
else:
logger.warning(f"There were missing keys in the checkpoint model loaded: {load_result.missing_keys}.")
if len(load_result.unexpected_keys) != 0:
logger.warning(
f"There were unexpected keys in the checkpoint model loaded: {load_result.unexpected_keys}."
)
def create_optimizer(self):
"""
Setup the optimizer.
We provide a reasonable default that works well. If you want to use something else, you can pass a tuple in the
Trainer's init through `optimizers`, or subclass and override this method in a subclass.
"""
if self.optimizer is None:
decay_parameters = get_parameter_names(self.model, [nn.LayerNorm])
decay_parameters = [name for name in decay_parameters if "bias" not in name]
decay_task_parameters = [name for name in decay_parameters if "grouper_model" not in name]
decay_grouper_parameters = [name for name in decay_parameters if "grouper_model" in name]
optimizer_grouped_parameters = [
{
"params": [p for n, p in self.model.named_parameters() if n in decay_task_parameters],
"weight_decay": self.args.weight_decay,
},
{
"params": [p for n, p in self.model.named_parameters() if n in decay_grouper_parameters],
"weight_decay": self.args.weight_decay,
"lr": self.args.grouper_learning_rate,
},
{
"params": [p for n, p in self.model.named_parameters() if n not in decay_parameters],
"weight_decay": 0.0,
},
]
optimizer_cls, optimizer_kwargs = Trainer.get_optimizer_cls_and_kwargs(self.args)
if self.sharded_ddp == ShardedDDPOption.SIMPLE:
self.optimizer = OSS(
params=optimizer_grouped_parameters,
optim=optimizer_cls,
**optimizer_kwargs,
)
else:
self.optimizer = optimizer_cls(optimizer_grouped_parameters, **optimizer_kwargs)
if is_sagemaker_mp_enabled():
self.optimizer = smp.DistributedOptimizer(self.optimizer)
return self.optimizer
def _maybe_log_save_evaluate(self, tr_loss, model, trial, epoch, ignore_keys_for_eval, evaluate=False):
if self.control.should_log:
if is_torch_tpu_available():
xm.mark_step()
logs: Dict[str, float] = {}
# all_gather + mean() to get average loss over all processes
tr_loss_scalar = self._nested_gather(tr_loss).mean().item()
# reset tr_loss to zero
tr_loss -= tr_loss
logs["loss"] = round(tr_loss_scalar / (self.state.global_step - self._globalstep_last_logged), 4)
logs["learning_rate"] = self._get_learning_rate()
self._total_loss_scalar += tr_loss_scalar
self._globalstep_last_logged = self.state.global_step
self.store_flos()
self.log(logs)
metrics = None
if evaluate: # and self.control.should_evaluate:
metrics = self.evaluate(ignore_keys=ignore_keys_for_eval)
self._report_to_hp_search(trial, epoch, metrics)
if self.control.should_save:
# may_log_and_save is called at the end of every epoch or after every iteration, and save_checkpoint is based on save_strategy.
# setting metrics to none so that metric_to_check is not evaluated.
self._save_checkpoint(model, trial, metrics=None)
self.control = self.callback_handler.on_save(self.args, self.state, self.control)
return metrics
def _sorted_checkpoints(
self, output_dir=None, checkpoint_prefix=PREFIX_CHECKPOINT_DIR, use_mtime=False
) -> List[str]:
ordering_and_checkpoint_path = []
glob_checkpoints = [str(x) for x in Path(output_dir).glob(f"{checkpoint_prefix}-*")]
for path in glob_checkpoints:
if use_mtime:
ordering_and_checkpoint_path.append((os.path.getmtime(path), path))
else:
regex_match = re.match(f".*{checkpoint_prefix}-([0-9]+)", path)
if regex_match is not None and regex_match.groups() is not None:
ordering_and_checkpoint_path.append((int(regex_match.groups()[0]), path))
checkpoints_sorted = sorted(ordering_and_checkpoint_path)
checkpoints_sorted = [checkpoint[1] for checkpoint in checkpoints_sorted]
# Make sure we don't delete the best model.
if self.state.best_model_checkpoint is not None:
if "best" in self.state.best_model_checkpoint:
# no need to remove any checkpoint from list, since best checkpoint is being explicitly saved.
return checkpoints_sorted
best_model_index = checkpoints_sorted.index(str(Path(self.state.best_model_checkpoint)))
for i in range(best_model_index, len(checkpoints_sorted) - 2):
checkpoints_sorted[i], checkpoints_sorted[i + 1] = checkpoints_sorted[i + 1], checkpoints_sorted[i]
return checkpoints_sorted
def _save_checkpoint(self, model, trial, metrics=None, save_best=False):
# In all cases, including ddp/dp/deepspeed, self.model is always a reference to the model we
# want to save except FullyShardedDDP.
# assert unwrap_model(model) is self.model, "internal model should be a reference to self.model"
# Save model checkpoint
if save_best:
checkpoint_folder = f"best_checkpoint"
else:
checkpoint_folder = f"{PREFIX_CHECKPOINT_DIR}-{self.state.global_step}"
if self.hp_search_backend is not None and trial is not None:
if self.hp_search_backend == HPSearchBackend.OPTUNA:
run_id = trial.number
elif self.hp_search_backend == HPSearchBackend.RAY:
from ray import tune
run_id = tune.get_trial_id()
elif self.hp_search_backend == HPSearchBackend.SIGOPT:
run_id = trial.id
elif self.hp_search_backend == HPSearchBackend.WANDB:
import wandb
run_id = wandb.run.id
run_name = self.hp_name(trial) if self.hp_name is not None else f"run-{run_id}"
run_dir = os.path.join(self.args.output_dir, run_name)
else:
run_dir = self.args.output_dir
self.store_flos()
output_dir = os.path.join(run_dir, checkpoint_folder)
self.save_model(output_dir, _internal_call=True)
if self.deepspeed:
# under zero3 model file itself doesn't get saved since it's bogus! Unless deepspeed
# config `stage3_gather_fp16_weights_on_model_save` is True
self.deepspeed.save_checkpoint(output_dir)
# Save optimizer and scheduler
if self.sharded_ddp == ShardedDDPOption.SIMPLE:
self.optimizer.consolidate_state_dict()
if is_torch_tpu_available():
xm.rendezvous("saving_optimizer_states")
xm.save(self.optimizer.state_dict(), os.path.join(output_dir, OPTIMIZER_NAME))
with warnings.catch_warnings(record=True) as caught_warnings:
xm.save(self.lr_scheduler.state_dict(), os.path.join(output_dir, SCHEDULER_NAME))
reissue_pt_warnings(caught_warnings)
elif is_sagemaker_mp_enabled():
if smp.rdp_rank() == 0:
# Consolidate the state dict on all processed of rdp_rank 0
opt_state_dict = self.optimizer.state_dict()
# Save it and the scheduler on the main process
if self.args.should_save:
torch.save(opt_state_dict, os.path.join(output_dir, OPTIMIZER_NAME))
with warnings.catch_warnings(record=True) as caught_warnings:
torch.save(self.lr_scheduler.state_dict(), os.path.join(output_dir, SCHEDULER_NAME))
reissue_pt_warnings(caught_warnings)
if self.do_grad_scaling:
torch.save(self.scaler.state_dict(), os.path.join(output_dir, SCALER_NAME))
elif self.args.should_save and not self.deepspeed:
# deepspeed.save_checkpoint above saves model/optim/sched
torch.save(self.optimizer.state_dict(), os.path.join(output_dir, OPTIMIZER_NAME))
with warnings.catch_warnings(record=True) as caught_warnings:
torch.save(self.lr_scheduler.state_dict(), os.path.join(output_dir, SCHEDULER_NAME))
reissue_pt_warnings(caught_warnings)
if self.do_grad_scaling:
torch.save(self.scaler.state_dict(), os.path.join(output_dir, SCALER_NAME))
# Determine the new best metric / best model checkpoint
if metrics is not None and self.args.metric_for_best_model is not None:
metric_to_check = self.args.metric_for_best_model
if not metric_to_check.startswith("eval_"):
metric_to_check = f"eval_{metric_to_check}"
metric_value = metrics[metric_to_check]
operator = np.greater if self.args.greater_is_better else np.less
if (
self.state.best_metric is None
or self.state.best_model_checkpoint is None
or operator(metric_value, self.state.best_metric)
):
self.state.best_metric = metric_value
self.state.best_model_checkpoint = output_dir
# Save the Trainer state
if self.args.should_save:
self.state.save_to_json(os.path.join(output_dir, TRAINER_STATE_NAME))
# Save RNG state in non-distributed training
rng_states = {
"python": random.getstate(),
"numpy": np.random.get_state(),
"cpu": torch.random.get_rng_state(),
}
if torch.cuda.is_available():
if self.args.local_rank == -1:
# In non distributed, we save the global CUDA RNG state (will take care of DataParallel)
rng_states["cuda"] = torch.cuda.random.get_rng_state_all()
else:
rng_states["cuda"] = torch.cuda.random.get_rng_state()
if is_torch_tpu_available():
rng_states["xla"] = xm.get_rng_state()
# A process can arrive here before the process 0 has a chance to save the model, in which case output_dir may
# not yet exist.
os.makedirs(output_dir, exist_ok=True)
local_rank = xm.get_local_ordinal() if is_torch_tpu_available() else self.args.local_rank
if local_rank == -1:
torch.save(rng_states, os.path.join(output_dir, "rng_state.pth"))
else:
torch.save(rng_states, os.path.join(output_dir, f"rng_state_{local_rank}.pth"))
# Maybe delete some older checkpoints.
if self.args.should_save:
self._rotate_checkpoints(use_mtime=True, output_dir=run_dir)
def _remove_unused_columns(self, dataset: "datasets.Dataset", description: Optional[str] = None):
if not self.args.remove_unused_columns:
return dataset
if self._signature_columns is None:
# Inspect model forward signature to keep only the arguments it accepts.
signature = inspect.signature(self.model.forward)
self._signature_columns = list(signature.parameters.keys())
# Labels may be named label or label_ids, the default data collator handles that.
self._signature_columns += ["label", "label_ids"]
self._signature_columns += ["guid"]
self._signature_columns += ["group"]
self._signature_columns += ["group_distribution"]
self._signature_columns += ["instance_weight"]
self._signature_columns += ["group_features"]
ignored_columns = list(set(dataset.column_names) - set(self._signature_columns))
if len(ignored_columns) > 0:
dset_description = "" if description is None else f"in the {description} set "
logger.info(
f"The following columns {dset_description} don't have a corresponding argument in "
f"`{self.model.__class__.__name__}.forward` and have been ignored: {', '.join(ignored_columns)}."
f" If {', '.join(ignored_columns)} are not expected by `{self.model.__class__.__name__}.forward`, "
f" you can safely ignore this message."
)
columns = [k for k in self._signature_columns if k in dataset.column_names]
if version.parse(datasets.__version__) < version.parse("1.4.0"):
dataset.set_format(
type=dataset.format["type"], columns=columns, format_kwargs=dataset.format["format_kwargs"]
)
return dataset
else:
return dataset.remove_columns(ignored_columns)
def _add_columns(self):
seed = self.args.seed
epoch = 0
# Check if evaluating.
if self.train_dataset is not None:
instance_weights = self.model.compute_beta_cover(seed, epoch, self.train_dataset)
self.train_dataset = self.train_dataset.add_column("instance_weight", instance_weights)
# eval datasets also need instance reweight is available, but do not update weight array of the model itself.
if self.eval_dataset is not None:
instance_weights = np.ones(len(self.eval_dataset)) # default and does not get udpated.
self.eval_dataset = self.eval_dataset.add_column("instance_weight", instance_weights)
def _update_columns(self, epoch):
# Iterate over training data to compute loss.
if epoch < self.args.adversary_warmup:
logger.info(f"---- Skipping Re-Weight in {epoch} due to adversary training -----")
return
logger.info(f"---- Re-Weight at the begeinning of epoch {epoch} -----")
train_losses = None
train_groups = None
dataset = self._remove_unused_columns(self.train_dataset, description="evaluation")
dataloader = DataLoader(
dataset,
sampler=SequentialSampler(dataset),
batch_size=self.args.train_batch_size,
collate_fn=self.data_collator,
drop_last=False,
num_workers=self.args.dataloader_num_workers,
pin_memory=self.args.dataloader_pin_memory,
)
model = self._wrap_model(self.model, training=False)
model.eval()
for step, inputs in tqdm(enumerate(dataloader)):
inputs = self._prepare_inputs(inputs)
with torch.no_grad():
groups = inputs["group"]
group_distributions = inputs.get("group_distribution", None)
instance_weights = inputs.get("instance_weight", None)
group_features = inputs.get("group_features", None)
del inputs["group"]
if group_distributions is not None:
del inputs["group_distribution"]
if instance_weights is not None:
del inputs["instance_weight"]
if group_features is not None:
del inputs["group_features"]
del inputs["guid"]
outputs = model.task_model(**inputs)
groups = torch.argmax(model.grouper_model(group_features), dim=1)
loss, _ = outputs[0], outputs[1]
if train_losses is None:
train_losses = loss.detach().cpu().numpy()
else:
train_losses = np.append(train_losses, loss.detach().cpu().numpy(), axis=0)
if train_groups is None:
train_groups = groups.detach().cpu().numpy()
else:
train_groups = np.append(train_groups, groups.detach().cpu().numpy(), axis=0)
# Process losses to compute beta cover weights
instance_weights = model.compute_beta_cover(self.args.seed, epoch, self.train_dataset, train_losses, train_groups)
# Update "instance_weights of self.train_dataset in dataloader (in the middle of training)
# TODO: Check if the dataloader which is consistent, is actually using the updated weights.
self.train_dataset = self.train_dataset.remove_columns("instance_weight")
self.train_dataset = self.train_dataset.add_column("instance_weight", instance_weights)
def _get_train_sampler(self) -> Optional[torch.utils.data.Sampler]:
if not has_length(self.train_dataset):
return None
generator = None
if self.args.world_size <= 1 and _is_torch_generator_available:
generator = torch.Generator()
# for backwards compatibility, we generate a seed here (which is sampled from a generator seeded with
# `args.seed`) if data_seed isn't provided.
# Further on in this method, we default to `args.seed` instead.
if self.args.data_seed is None:
seed = int(torch.empty((), dtype=torch.int64).random_().item())
else:
seed = self.args.data_seed
generator.manual_seed(seed)
seed = self.args.data_seed if self.args.data_seed is not None else self.args.seed
# Build the sampler.
if self.args.group_by_length:
if is_datasets_available() and isinstance(self.train_dataset, datasets.Dataset):
lengths = (
self.train_dataset[self.args.length_column_name]
if self.args.length_column_name in self.train_dataset.column_names
else None
)
else:
lengths = None
model_input_name = self.tokenizer.model_input_names[0] if self.tokenizer is not None else None
if self.args.world_size <= 1:
return LengthGroupedSampler(
self.args.train_batch_size * self.args.gradient_accumulation_steps,
dataset=self.train_dataset,
lengths=lengths,
model_input_name=model_input_name,
generator=generator,
)
else:
return DistributedLengthGroupedSampler(
self.args.train_batch_size * self.args.gradient_accumulation_steps,
dataset=self.train_dataset,
num_replicas=self.args.world_size,
rank=self.args.process_index,
lengths=lengths,
model_input_name=model_input_name,
seed=seed,
)
else:
if self.args.world_size <= 1:
if _is_torch_generator_available:
return RandomSampler(self.train_dataset, generator=generator)
# TODO: Currently group reweighting is not required.
return RandomSampler(self.train_dataset)
elif (
self.args.parallel_mode in [ParallelMode.TPU, ParallelMode.SAGEMAKER_MODEL_PARALLEL]
and not self.args.dataloader_drop_last
):
# Use a loop for TPUs when drop_last is False to have all batches have the same size.
return DistributedSamplerWithLoop(
self.train_dataset,
batch_size=self.args.per_device_train_batch_size,
num_replicas=self.args.world_size,
rank=self.args.process_index,
seed=seed,
)
else:
return DistributedSampler(
self.train_dataset,
num_replicas=self.args.world_size,
rank=self.args.process_index,
seed=seed,
)
def get_train_dataloader(self):
# add features to the dataset too.
if self.train_dataset is None:
raise ValueError("Trainer: training requires a train_dataset.")
train_dataset = self.train_dataset
if is_datasets_available() and isinstance(train_dataset, datasets.Dataset):
train_dataset = self._remove_unused_columns(train_dataset, description="training")
"""
train_feature_dict = {}
for index, row in train_features.iterrows():
guid = row.guid
emb = row.emb
pred_prob = row.pred_probs
target = np.asarray([row.target])
feature_vector = list(np.concatenate([emb, pred_prob, target]))
train_feature_dict[guid] = feature_vector
# Add other features : Dynamics, perturbed features etc...
train_feature_list = []
for id_, ex in enumerate(train_dataset):
guid = ex["guid"]
train_feature_list.append(train_feature_dict[guid])
train_dataset = train_dataset.add_column("group_features", train_feature_list)
"""
logger.info(f'Train features for adversary model loaded')
if isinstance(train_dataset, torch.utils.data.IterableDataset):
if self.args.world_size > 1:
train_dataset = IterableDatasetShard(
train_dataset,
batch_size=self.args.train_batch_size,
drop_last=self.args.dataloader_drop_last,
num_processes=self.args.world_size,
process_index=self.args.process_index,
)
return DataLoader(
train_dataset,
batch_size=self.args.per_device_train_batch_size,
collate_fn=self.data_collator,
num_workers=self.args.dataloader_num_workers,
pin_memory=self.args.dataloader_pin_memory,
)
train_sampler = self._get_train_sampler()
return DataLoader(
train_dataset,
batch_size=self.args.train_batch_size,
sampler=train_sampler,
collate_fn=self.data_collator,
drop_last=self.args.dataloader_drop_last,
num_workers=self.args.dataloader_num_workers,
pin_memory=self.args.dataloader_pin_memory,
)
def training_step_primary(self, model: nn.Module, inputs: Dict[str, Union[torch.Tensor, Any]]) -> torch.Tensor:
model.train()
# Freeze grouper model parameters while training primary model
for param in model.module.grouper_model.parameters():
param.requires_grad = False
inputs = self._prepare_inputs(inputs)
# Sagemaker not implimented
with self.autocast_smart_context_manager():
groups = inputs["group"]
group_distributions = inputs.get("group_distribution", None)
instance_weights = inputs.get("instance_weight", None)
# del inputs["group"]
if group_distributions is not None:
del inputs["group_distribution"]
# Only reweight during task adversary phase.
# if instance_weights is not None:
# del inputs["instance_weight"]
loss, outputs = self.compute_loss_primary(model, inputs, return_outputs=True)
# Here is where GCDRO loss was computed.
loss = loss.mean() # This is not need.
if isinstance(outputs, dict):
logits = tuple(v for k, v in outputs.items() if k not in ["loss"])
else:
logits = outputs[1:]
if self.args.n_gpu > 1:
loss = loss.mean() # mean() to average on multi-gpu parallel training
if self.args.gradient_accumulation_steps > 1 and not self.deepspeed:
# deepspeed handles loss scaling by gradient_accumulation_steps in its `backward`
loss = loss / self.args.gradient_accumulation_steps
#wandb.log({"loss": loss})
if self.do_grad_scaling:
self.scaler.scale(loss).backward()
elif self.use_apex:
with amp.scale_loss(loss, self.optimizer) as scaled_loss:
scaled_loss.backward()
elif self.deepspeed:
# loss gets scaled under gradient_accumulation_steps in deepspeed
loss = self.deepspeed.backward(loss)
else:
loss.backward()
# Unfreeze grouper model parameters while training primary model
for param in model.module.grouper_model.parameters():
param.requires_grad = True
return loss.detach(), logits
def training_step_adversary(self, model: nn.Module, inputs: Dict[str, Union[torch.Tensor, Any]]) -> torch.Tensor:
model.train()
# Freeze task model parameters while training adversary grouper model
for param in model.module.task_model.parameters():
param.requires_grad = False
inputs = self._prepare_inputs(inputs)
# Sagemaker not implimented
with self.autocast_smart_context_manager():
groups = inputs["group"]
group_distributions = inputs.get("group_distribution", None)
instance_weights = inputs.get("instance_weight", None)
# del inputs["group"]
if group_distributions is not None:
del inputs["group_distribution"]
if instance_weights is not None:
del inputs["instance_weight"]
loss, outputs = self.compute_loss_adversary(model, inputs, return_outputs=True)
# Here is where GCDRO loss was computed.
loss = loss.mean() # This is not needed.
if isinstance(outputs, dict):
logits = tuple(v for k, v in outputs.items() if k not in ["loss"])
else:
logits = outputs[1:]
if self.args.n_gpu > 1:
loss = loss.mean() # mean() to average on multi-gpu parallel training
if self.args.gradient_accumulation_steps > 1 and not self.deepspeed:
# deepspeed handles loss scaling by gradient_accumulation_steps in its `backward`
loss = loss / self.args.gradient_accumulation_steps
#wandb.log({"loss": loss})
if self.do_grad_scaling:
self.scaler.scale(loss).backward()
elif self.use_apex:
with amp.scale_loss(loss, self.optimizer) as scaled_loss:
scaled_loss.backward()
elif self.deepspeed:
# loss gets scaled under gradient_accumulation_steps in deepspeed
loss = self.deepspeed.backward(loss)
else:
loss.backward()
# Unfreeze task model parameters while training adversary grouper model
for param in model.module.task_model.parameters():
param.requires_grad = True
return loss.detach(), logits
def compute_loss_primary(self, model, inputs, return_outputs=False):
del inputs["guid"]
if self.label_smoother is not None and "labels" in inputs:
labels = inputs.pop("labels")
else:
labels = None
inputs["adversary"] = False
outputs = model(**inputs)
# loss should not be reduced.
# handle loss computation across GPUs.
# Save past state if it exists
# TODO: this needs to be fixed and made cleaner later.
if self.args.past_index >= 0:
self._past = outputs[self.args.past_index]
if labels is not None:
loss = self.label_smoother(outputs, labels)
else:
# We don't use .loss here since the model may return tuples instead of ModelOutput.
loss = outputs["loss"] if isinstance(outputs, dict) else outputs[0]
return (loss, outputs) if return_outputs else loss
def compute_loss_adversary(self, model, inputs, return_outputs=False):
del inputs["guid"]
if self.label_smoother is not None and "labels" in inputs:
labels = inputs.pop("labels")
else:
labels = None
inputs["adversary"] = True
outputs = model(**inputs)
# loss should not be reduced.
# handle loss computation across GPUs.
# Save past state if it exists
# TODO: this needs to be fixed and made cleaner later.
if self.args.past_index >= 0:
self._past = outputs[self.args.past_index]
if labels is not None:
loss = self.label_smoother(outputs, labels)
else:
# We don't use .loss here since the model may return tuples instead of ModelOutput.
loss = outputs["loss"] if isinstance(outputs, dict) else outputs[0]
return (loss, outputs) if return_outputs else loss
def get_eval_dataloader(self, eval_dataset: Optional[Dataset] = None) -> DataLoader:
"""
Returns the evaluation [`~torch.utils.data.DataLoader`].
Subclass and override this method if you want to inject some custom behavior.
Args:
eval_dataset (`torch.utils.data.Dataset`, *optional*):
If provided, will override `self.eval_dataset`. If it is an `datasets.Dataset`, columns not accepted by
the `model.forward()` method are automatically removed. It must implement `__len__`.
"""
if eval_dataset is None and self.eval_dataset is None:
raise ValueError("Trainer: evaluation requires an eval_dataset.")
eval_dataset = eval_dataset if eval_dataset is not None else self.eval_dataset
eval_features = self.eval_features
if is_datasets_available() and isinstance(eval_dataset, datasets.Dataset):
eval_dataset = self._remove_unused_columns(eval_dataset, description="evaluation")
"""
eval_feature_list = []
for id_, ex in enumerate(eval_dataset):
guid = ex["guid"]
features = eval_features.loc[eval_features["guid"] == ex["guid"]]
emb = features["emb"].to_numpy()[0]
pred_prob = features["pred_probs"].to_numpy()[0]
target = features["target"].to_numpy()
eval_feature_list.append(list(np.concatenate([emb, pred_prob, target])))
# Add other features : Dynamics, perturbed features etc...
eval_dataset = eval_dataset.add_column("group_features", eval_feature_list)
"""
if isinstance(eval_dataset, torch.utils.data.IterableDataset):
if self.args.world_size > 1:
eval_dataset = IterableDatasetShard(
eval_dataset,
batch_size=self.args.per_device_eval_batch_size,
drop_last=self.args.dataloader_drop_last,
num_processes=self.args.world_size,
process_index=self.args.process_index,
)
return DataLoader(
eval_dataset,
batch_size=self.args.eval_batch_size,
collate_fn=self.data_collator,
num_workers=self.args.dataloader_num_workers,
pin_memory=self.args.dataloader_pin_memory,
)
eval_sampler = self._get_eval_sampler(eval_dataset)
return DataLoader(
eval_dataset,
sampler=eval_sampler,
batch_size=self.args.eval_batch_size,
collate_fn=self.data_collator,
drop_last=self.args.dataloader_drop_last,
num_workers=self.args.dataloader_num_workers,
pin_memory=self.args.dataloader_pin_memory,
)
def evaluate(
self,
eval_dataset: Optional[Dataset] = None,
ignore_keys: Optional[List[str]] = None,
metric_key_prefix: str = "eval",
) -> Dict[str, float]:
"""
Run evaluation and returns metrics.
The calling script will be responsible for providing a method to compute metrics, as they are task-dependent
(pass it to the init `compute_metrics` argument).
You can also subclass and override this method to inject custom behavior.
Args:
eval_dataset (`Dataset`, *optional*):
Pass a dataset if you wish to override `self.eval_dataset`. If it is an `datasets.Dataset`, columns not
accepted by the `model.forward()` method are automatically removed. It must implement the `__len__`
method.
ignore_keys (`Lst[str]`, *optional*):
A list of keys in the output of your model (if it is a dictionary) that should be ignored when
gathering predictions.
metric_key_prefix (`str`, *optional*, defaults to `"eval"`):
An optional prefix to be used as the metrics key prefix. For example the metrics "bleu" will be named
"eval_bleu" if the prefix is "eval" (default)
Returns:
A dictionary containing the evaluation loss and the potential metrics computed from the predictions. The
dictionary also contains the epoch number which comes from the training state.
"""
# memory metrics - must set up as early as possible
self._memory_tracker.start()
eval_dataloader = self.get_eval_dataloader(self.eval_dataset)
start_time = time.time()
# Declare an evaluation loss computer object.
if self.dro_args.is_robust:
if not self.dro_args.use_group_weights:
group_list = [ex["group"] for ex in self.eval_dataset]
unique_groups, group_counts = np.unique(group_list, return_counts=True)
n_groups = len(unique_groups)
group_counts = torch.LongTensor(group_counts)
else:
group_distributions = np.asarray([ex["group_distribution"] for ex in self.eval_dataset])
group_list = np.argmax(group_distributions, axis=1)
unique_groups, group_counts = np.unique(group_list, return_counts=True)
n_groups = len(unique_groups)
group_counts = torch.LongTensor(group_counts)
self.val_loss_computer = LossComputer(
dro_args=self.dro_args,
training_args=self.args,
# dataset=dataset['train_data'], ## Why is this needed? to compute n_groups, group_counts which are passed as arguments now.
n_groups=n_groups,
group_counts=group_counts)
# adj=adjustments)
eval_loop = self.prediction_loop if self.args.use_legacy_prediction_loop else self.evaluation_loop
output = eval_loop(
eval_dataloader,
description="Evaluation",
# No point gathering the predictions if there are no metrics, otherwise we defer to
# self.args.prediction_loss_only
prediction_loss_only=True if self.compute_metrics is None else None,
ignore_keys=ignore_keys,
metric_key_prefix=metric_key_prefix,
)
# Print stats after evaluation loop complete.
# if self.dro_args.is_robust:
# self.val_loss_computer.log_stats(logger, True)
# self.log(self.val_loss_computer.get_stats(self.model, self.args))
"""
if self.dro_args.is_robust and self.dro_args.automatic_adjustment:
gen_gap = self.val_loss_computer.avg_group_loss - self.train_loss_computer.exp_avg_loss
adjustments = gen_gap * torch.sqrt(self.train_loss_computer.group_counts)
self.train_loss_computer.adj = adjustments
logger.info('Adjustments updated\n')
for group_idx in range(self.train_loss_computer.n_groups):
logger.info(
f' {group_idx}:\t'
f'adj = {self.train_loss_computer.adj[group_idx]:.3f}\n')
"""
total_batch_size = self.args.eval_batch_size * self.args.world_size
output.metrics.update(
speed_metrics(
metric_key_prefix,
start_time,
num_samples=output.num_samples,
num_steps=math.ceil(output.num_samples / total_batch_size),
)
)
self.log(output.metrics)
if DebugOption.TPU_METRICS_DEBUG in self.args.debug:
# tpu-comment: Logging debug metrics for PyTorch/XLA (compile, execute times, ops, etc.)
xm.master_print(met.metrics_report())
self.control = self.callback_handler.on_evaluate(self.args, self.state, self.control, output.metrics)
self._memory_tracker.stop_and_update_metrics(output.metrics)
return output.metrics
def evaluation_loop(
self,
dataloader: DataLoader,
description: str,
prediction_loss_only: Optional[bool] = None,
ignore_keys: Optional[List[str]] = None,
metric_key_prefix: str = "eval",
) -> EvalLoopOutput:
"""
Prediction/evaluation loop, shared by `Trainer.evaluate()` and `Trainer.predict()`.
Works both with or without labels.
"""
args = self.args
prediction_loss_only = prediction_loss_only if prediction_loss_only is not None else args.prediction_loss_only
# if eval is called w/o train init deepspeed here
if args.deepspeed and not self.deepspeed:
# XXX: eval doesn't have `resume_from_checkpoint` arg but we should be able to do eval
# from the checkpoint eventually
deepspeed_engine, _, _ = deepspeed_init(
self, num_training_steps=0, resume_from_checkpoint=None, inference=True
)
self.model = deepspeed_engine.module
self.model_wrapped = deepspeed_engine
self.deepspeed = deepspeed_engine
model = self._wrap_model(self.model, training=False)
# if full fp16 or bf16 eval is wanted and this ``evaluation`` or ``predict`` isn't called
# while ``train`` is running, cast it to the right dtype first and then put on device
if not self.is_in_train:
if args.fp16_full_eval:
model = model.to(dtype=torch.float16, device=args.device)
elif args.bf16_full_eval:
model = model.to(dtype=torch.bfloat16, device=args.device)
batch_size = dataloader.batch_size
logger.info(f"***** Running {description} *****")
if has_length(dataloader.dataset):
logger.info(f" Num examples = {self.num_examples(dataloader)}")
else:
logger.info(" Num examples: Unknown")
logger.info(f" Batch size = {batch_size}")
model.eval()
self.callback_handler.eval_dataloader = dataloader
# Do this before wrapping.
eval_dataset = dataloader.dataset
if is_torch_tpu_available():
dataloader = pl.ParallelLoader(dataloader, [args.device]).per_device_loader(args.device)
if args.past_index >= 0:
self._past = None
# Initialize containers
# losses/preds/labels on GPU/TPU (accumulated for eval_accumulation_steps)
losses_host = None
preds_host = None
labels_host = None
# losses/preds/labels on CPU (final containers)
all_losses = None
all_preds = None
all_labels = None
# also compute current groups so that we are selecting worst group performance based on predicted group performance.
groups_host = None
all_groups = None
# Will be useful when we have an iterable dataset so don't know its length.
observed_num_examples = 0
# Main evaluation loop
for step, inputs in enumerate(dataloader):
# Update the observed num examples
observed_batch_size = find_batch_size(inputs)
if observed_batch_size is not None:
observed_num_examples += observed_batch_size
# For batch samplers, batch_size is not known by the dataloader in advance.
if batch_size is None:
batch_size = observed_batch_size
# Prediction step
# TODO(bparan): Inputs needs to be stripped of non-tensor metadata to be sent to model forward function.
# Metadata information can be used to either log model performance, or provide group information.
# del inputs["guid"]
# compute argmax group on the evalset
inputs = self._prepare_inputs(inputs)
group_distribution = model.grouper_model(inputs["group_features"])
group = torch.argmax(group_distribution, axis=1)
loss, logits, labels = self.prediction_step(model, inputs, prediction_loss_only, ignore_keys=ignore_keys)
if is_torch_tpu_available():
xm.mark_step()
# Update containers on host
if loss is not None:
losses = self._nested_gather(loss.repeat(batch_size))
losses_host = losses if losses_host is None else torch.cat((losses_host, losses), dim=0)
if group is not None:
groups = self._nested_gather(group)
groups_host = groups if groups_host is None else nested_concat(groups_host, groups, padding_index=-100)
if labels is not None:
labels = self._pad_across_processes(labels)
labels = self._nested_gather(labels)
labels_host = labels if labels_host is None else nested_concat(labels_host, labels, padding_index=-100)
if logits is not None:
logits = self._pad_across_processes(logits)
logits = self._nested_gather(logits)
if self.preprocess_logits_for_metrics is not None:
logits = self.preprocess_logits_for_metrics(logits, labels)
preds_host = logits if preds_host is None else nested_concat(preds_host, logits, padding_index=-100)
self.control = self.callback_handler.on_prediction_step(args, self.state, self.control)
# Gather all tensors and put them back on the CPU if we have done enough accumulation steps.
if args.eval_accumulation_steps is not None and (step + 1) % args.eval_accumulation_steps == 0:
if losses_host is not None:
losses = nested_numpify(losses_host)
all_losses = losses if all_losses is None else np.concatenate((all_losses, losses), axis=0)
if preds_host is not None:
logits = nested_numpify(preds_host)
all_preds = logits if all_preds is None else nested_concat(all_preds, logits, padding_index=-100)
if labels_host is not None:
labels = nested_numpify(labels_host)
all_labels = (
labels if all_labels is None else nested_concat(all_labels, labels, padding_index=-100)
)
if groups_host is not None:
groups = nested_numpify(groups_host)
all_groups = (
groups if all_groups is None else nested_concat(all_groups, groups, padding_index=-100)
)
# Set back to None to begin a new accumulation
losses_host, preds_host, labels_host = None, None, None
if args.past_index and hasattr(self, "_past"):
# Clean the state at the end of the evaluation loop
delattr(self, "_past")
# Gather all remaining tensors and put them back on the CPU
if losses_host is not None:
losses = nested_numpify(losses_host)
all_losses = losses if all_losses is None else np.concatenate((all_losses, losses), axis=0)
if preds_host is not None:
logits = nested_numpify(preds_host)
all_preds = logits if all_preds is None else nested_concat(all_preds, logits, padding_index=-100)
if labels_host is not None:
labels = nested_numpify(labels_host)
all_labels = labels if all_labels is None else nested_concat(all_labels, labels, padding_index=-100)
if groups_host is not None:
groups = nested_numpify(groups_host)
all_groups = (
groups if all_groups is None else nested_concat(all_groups, groups, padding_index=-100)
)
# Number of samples
if has_length(eval_dataset):
num_samples = len(eval_dataset)
# The instance check is weird and does not actually check for the type, but whether the dataset has the right
# methods. Therefore we need to make sure it also has the attribute.
elif isinstance(eval_dataset, IterableDatasetShard) and hasattr(eval_dataset, "num_examples"):
num_samples = eval_dataset.num_examples
else:
num_samples = observed_num_examples
# Number of losses has been rounded to a multiple of batch_size and in a distributed training, the number of
# samplers has been rounded to a multiple of batch_size, so we truncate.
if all_losses is not None:
all_losses = all_losses[:num_samples]
if all_preds is not None:
all_preds = nested_truncate(all_preds, num_samples)
if all_labels is not None:
all_labels = nested_truncate(all_labels, num_samples)
if all_groups is not None:
all_groups = nested_truncate(all_groups, num_samples)
# Metrics!
if self.compute_metrics is not None and all_preds is not None and all_labels is not None:
metrics = self.compute_metrics(EvalPrediction(predictions=all_preds, label_ids=all_labels))
else:
metrics = {}
# Compute Worst Group Metrics, if group information is evailable in the evaluation set.
if hasattr(self, "val_loss_computer"):
key = "accuracy"
pred = self._prepare_input(torch.tensor((np.argmax(all_preds,1)==all_labels), dtype=torch.float32))
if self.args.select_predicted_worst_group:
n_eval_groups = model.n_slices
groups = self._prepare_input(torch.tensor(groups)) #TODO: this may have to change for multigpus.
group_map = (groups == self._prepare_input(torch.arange(model.n_slices).unsqueeze(1).long())).float()
group_count = group_map.sum(1)
group_denom = group_count + (group_count==0).float() # avoid nans
group_acc = (group_map @ pred.view(-1))/group_denom
else:
n_eval_groups = self.val_loss_computer.n_groups
groups = self._prepare_input(torch.tensor([ex["group"] for ex in self.eval_dataset]))
group_acc = self.val_loss_computer.compute_group_avg(pred, groups)[0]
for group_idx in range(n_eval_groups):
metrics[f"group_{key}_{group_idx}"] = group_acc[group_idx].item()
if self.args.select_predicted_worst_group:
# select accuracy of top k worst loss groups and assign a new probability to them.
# find 50% of groups that have lowest group counts
# mega_group 0 rest are mega_group 1
# alpha proportion of the groups ought to be selected
# top_worst_groups = torch.argsort(group_acc)[:int(len(group_acc)/2)+ 1].cpu().numpy()
top_worst_groups = torch.argsort(group_acc)[:int(len(group_acc) * self.dro_args.alpha)].cpu().numpy()
mega_groups = self._prepare_input(torch.tensor([(0 if group.item() in top_worst_groups else 1) for group in groups]))
mega_group_map = (mega_groups == self._prepare_input(torch.arange(2).unsqueeze(1).long())).float()
mega_group_count = mega_group_map.sum(1)
mega_group_denom = mega_group_count + (mega_group_count==0).float() # avoid nans
mega_group_acc = (mega_group_map @ pred.view(-1))/mega_group_denom
for group_idx in range(2):
metrics[f"megagroup_{key}_{group_idx}"] = mega_group_acc[group_idx].item()
# To be JSON-serializable, we need to remove numpy types or zero-d tensors
metrics = denumpify_detensorize(metrics)
if all_losses is not None:
metrics[f"{metric_key_prefix}_loss"] = all_losses.mean().item()
# Prefix all keys with metric_key_prefix + '_'
for key in list(metrics.keys()):
if not key.startswith(f"{metric_key_prefix}_"):
metrics[f"{metric_key_prefix}_{key}"] = metrics.pop(key)
return EvalLoopOutput(predictions=all_preds, label_ids=all_labels, metrics=metrics, num_samples=num_samples)
def prediction_step(
self,
model: nn.Module,
inputs: Dict[str, Union[torch.Tensor, Any]],
prediction_loss_only: bool,
ignore_keys: Optional[List[str]] = None,
) -> Tuple[Optional[torch.Tensor], Optional[torch.Tensor], Optional[torch.Tensor]]:
"""
Perform an evaluation step on `model` using `inputs`.
Subclass and override to inject custom behavior.
Args:
model (`nn.Module`):
The model to evaluate.
inputs (`Dict[str, Union[torch.Tensor, Any]]`):
The inputs and targets of the model.
The dictionary will be unpacked before being fed to the model. Most models expect the targets under the
argument `labels`. Check your model's documentation for all accepted arguments.
prediction_loss_only (`bool`):
Whether or not to return the loss only.
ignore_keys (`Lst[str]`, *optional*):
A list of keys in the output of your model (if it is a dictionary) that should be ignored when
gathering predictions.
Return:
Tuple[Optional[torch.Tensor], Optional[torch.Tensor], Optional[torch.Tensor]]: A tuple with the loss,
logits and labels (each being optional).
"""
has_labels = all(inputs.get(k) is not None for k in self.label_names)
inputs = self._prepare_inputs(inputs)
if ignore_keys is None:
if hasattr(self.model, "config"):
ignore_keys = getattr(self.model.config, "keys_to_ignore_at_inference", [])
else:
ignore_keys = []
# labels may be popped when computing the loss (label smoothing for instance) so we grab them first.
if has_labels:
labels = nested_detach(tuple(inputs.get(name) for name in self.label_names))
if len(labels) == 1:
labels = labels[0]
else:
labels = None
with torch.no_grad():
if is_sagemaker_mp_enabled():
raw_outputs = smp_forward_only(model, inputs)
if has_labels:
if isinstance(raw_outputs, dict):
loss_mb = raw_outputs["loss"]
logits_mb = tuple(v for k, v in raw_outputs.items() if k not in ignore_keys + ["loss"])
else:
loss_mb = raw_outputs[0]
logits_mb = raw_outputs[1:]
loss = loss_mb.reduce_mean().detach().cpu()
logits = smp_nested_concat(logits_mb)
else:
loss = None
if isinstance(raw_outputs, dict):
logits_mb = tuple(v for k, v in raw_outputs.items() if k not in ignore_keys)
else:
logits_mb = raw_outputs
logits = smp_nested_concat(logits_mb)
else:
if has_labels:
with self.autocast_smart_context_manager():
groups = inputs["group"]
group_distributions = inputs.get("group_distribution", None)
instance_weights = inputs.get("instance_weight", None)
group_features = inputs.get("group_features", None)
if group_distributions is not None:
del inputs["group_distribution"]
if instance_weights is not None:
del inputs["instance_weight"]
if group_features is not None:
del inputs["group_features"]
del inputs["group"]
del inputs["guid"]
# We are also loading eval features.
outputs = model.task_model(**inputs)
#loss, outputs = self.compute_loss(model, inputs, return_outputs=True)
loss = outputs[0]
# loss on inividual elements of batch
loss = loss.mean() # reduce the loss here.
loss = loss.mean().detach()
if isinstance(outputs, dict):
logits = tuple(v for k, v in outputs.items() if k not in ignore_keys + ["loss"])
else:
logits = outputs[1:]
else:
loss = None
with self.autocast_smart_context_manager():
#TODO: Remove non-tensorizable elements from inputs.
groups = inputs["group"]
group_features = inputs.get("group_features", None)
del inputs["guid"]
del inputs["group"]
#del inputs["group"]
if self.dro_args.use_group_weights or "group_distribution" in inputs:
del inputs["group_distribution"]
if "instance_weight" in inputs:
del inputs["instance_weight"]
if group_features is not None:
del inputs["group_features"]
outputs = model.task_model(**inputs)
if isinstance(outputs, dict):
logits = tuple(v for k, v in outputs.items() if k not in ignore_keys)
else:
logits = outputs[0]
# TODO: this needs to be fixed and made cleaner later.
if self.args.past_index >= 0:
self._past = outputs[self.args.past_index - 1]
if prediction_loss_only:
return (loss, None, None)
logits = nested_detach(logits)
if len(logits) == 1:
logits = logits[0]
return (loss, logits, labels)
def _save(self, output_dir: Optional[str] = None, state_dict=None):
# If we are executing this function, we are the process zero, so we don't check for that.
output_dir = output_dir if output_dir is not None else self.args.output_dir
os.makedirs(output_dir, exist_ok=True)
logger.info(f"Saving model checkpoint to {output_dir}")
# Save a trained model and configuration using `save_pretrained()`.
# They can then be reloaded using `from_pretrained()`
if not isinstance(self.model, PreTrainedModel):
if isinstance(unwrap_model(self.model), PreTrainedModel):
if state_dict is None:
state_dict = self.model.state_dict()
unwrap_model(self.model).save_pretrained(output_dir, state_dict=state_dict)
else:
logger.info("Saving Trainer.model separately into task model and grouper model")
task_model = self.model.task_model
grouper_model = self.model.grouper_model
if state_dict is None:
state_dict = task_model.state_dict()
# torch.save(state_dict, os.path.join(output_dir, WEIGHTS_NAME))
task_model.save_pretrained(output_dir, state_dict=state_dict)
grouper_state_dict = grouper_model.state_dict()
os.makedirs(os.path.join(output_dir, "grouper"), exist_ok=True)
torch.save(grouper_state_dict, os.path.join(output_dir, "grouper", WEIGHTS_NAME))
else:
self.model.save_pretrained(output_dir, state_dict=state_dict)
if self.tokenizer is not None:
self.tokenizer.save_pretrained(output_dir)
# Good practice: save your training arguments together with the trained model
torch.save(self.args, os.path.join(output_dir, TRAINING_ARGS_NAME)) | 93,684 | 45.53999 | 199 | py |
robust-transformers | robust-transformers-main/src/transformers/dro_loss.py | from curses import meta
import os
import torch
import torch.nn as nn
import torch.nn.functional as F
import numpy as np
from dataclasses import dataclass, field
from collections.abc import Mapping
from typing import TYPE_CHECKING, Any, Callable, Dict, List, Optional, Tuple, Union
@dataclass
class DroArguments:
"""
Arguments pertaining to Group Domain Robustness Optimization.
"""
is_robust: bool = field(default=False, metadata={"help": "Do Robust Optimization."})
robust_algorithm: str = field(default="GDRO", metadata={"help": "Type of Robust Optimization Algorithm."})
use_group_weights: bool = field(default=False, metadata={"help": "Use distributions over groups to compute group averages."})
selection_criterion: str = field(default="worst_accuracy", metadata={"help": "Model selection criterion on the dev set."})
gamma: float = field(default=0.5, metadata={"help": "Discount factor for exp. moving average of group losses."})
alpha: float = field(default=0.2, metadata={"help": "Hyperparameter for Greedy DRO."})
min_var_weight: float = field(default=0.1, metadata={"help": "Hyperparameter for Greedy DRO."})
step_size: float = field(default=0.01, metadata={"help": "Hyperparameter for EG DRO."})
normalize_loss: bool = field(default=False, metadata={"help": "Normalize group loss."})
btl: bool = field(default=False, metadata={"help": "Turn on greedy DRO and EG DRO."})
generalization_adjustment: str = field(default="0.0", metadata={"help": "Group Adj (based on known prior or current val. loss"})
automatic_adjustment: bool = field(default=False, metadata={"help": "Turn on Adjustments"})
reweight_groups: bool = field(default=False, metadata={"help": "Turn on group count based batch sampling"})
n_groups: int = field(default=0, metadata={"help": "Number of groups."})
group_counts: list = field(default=None, metadata={"help": "List of group counts in training data"})
group_str: str = field(default="", metadata={"help": "Group Str"})
max_var_weight: str = field(default=1.0, metadata={"help": "Hyperparameter for Greedy DRO Adversary."})
"""
Arguments pertaining to Common Gradient Descent Robustness Optimization.
"""
cg_step_size: float = field(default=0.05, metadata={"help": "CG Inner step size for gradient computation."})
cg_C: float = field(default=0, metadata={"help": "CG adjustment multiplier."})
"""
Arguments for GC-DRO loss : C-Var (greedy DRO) with instance reweighting (Zhou et. al.)
"""
do_instance_reweight: bool = field(default=False, metadata={"help": "Do Beta cover instance reweighting."})
beta: float = field(default=0.5, metadata={"help": "Beta cover."})
beta_ema: float = field(default=0.5, metadata={"help": "EMA loss averaging discount factor."})
class LossComputer:
def __init__(self, dro_args, training_args, n_groups, group_counts, adj=None):
self.is_robust = dro_args.is_robust
self.gamma = dro_args.gamma
self.alpha = dro_args.alpha
self.min_var_weight = dro_args.min_var_weight
self.step_size = dro_args.step_size
self.normalize_loss = dro_args.normalize_loss
self.btl = dro_args.btl
self.training_args = training_args
## Can we pass these arguments, after computing upon reading the data, and then passing it through training args to Trainer.
self.n_groups = n_groups
self.group_counts = self._prepare_input(group_counts) #TODO: Shifting to device should be handled carefully.
self.group_frac = self.group_counts/self.group_counts.sum()
#self.group_str = group_str
if adj is not None:
self.adj = self._prepare_input(torch.from_numpy(adj).float())
else:
self.adj = self._prepare_input(torch.zeros(self.n_groups).float())
if dro_args.is_robust:
assert dro_args.alpha, 'alpha must be specified'
# quantities maintained throughout training
self.adv_probs = self._prepare_input(torch.ones(self.n_groups))/self.n_groups
self.exp_avg_loss = self._prepare_input(torch.zeros(self.n_groups))
self.group_loss = self._prepare_input(torch.zeros(self.n_groups))
self.exp_avg_initialized = self._prepare_input(torch.zeros(self.n_groups).byte())
# Other custom toggles
self.use_group_weights = dro_args.use_group_weights
self.reset_stats()
def _prepare_input(self, data: Union[torch.Tensor, Any]) -> Union[torch.Tensor, Any]:
"""
Prepares one `data` before feeding it to the model, be it a tensor or a nested list/dictionary of tensors.
"""
if isinstance(data, Mapping):
return type(data)({k: self._prepare_input(v) for k, v in data.items()})
elif isinstance(data, (tuple, list)):
return type(data)(self._prepare_input(v) for v in data)
elif isinstance(data, torch.Tensor):
kwargs = dict(device=self.training_args.device)
if self.training_args.deepspeed and data.dtype != torch.int64:
# NLP models inputs are int64 and those get adjusted to the right dtype of the
# embedding. Other models such as wav2vec2's inputs are already float and thus
# may need special handling to match the dtypes of the model
kwargs.update(dict(dtype=self.training_args.hf_deepspeed_config.dtype()))
return data.to(**kwargs)
return data
def loss(self, per_sample_losses, yhat, y, group_idx=None, group_distribution=None, instance_weights=None, is_training=False):
# compute per-sample and per-group losses
# per_sample_losses = self.criterion(yhat, y) #TODO: Change, per_sample_loss is already computed.
group_loss, group_count = self.compute_group_avg(per_sample_losses, group_idx, group_distribution)
group_acc, group_count = self.compute_group_avg((torch.argmax(yhat,1)==y).float(), group_idx, group_distribution)
# update historical losses
self.update_exp_avg_loss(group_loss, group_count)
# compute overall loss
if self.is_robust and not self.btl:
actual_loss, weights = self.compute_robust_loss(group_loss, group_count)
elif self.is_robust and self.btl:
actual_loss, weights = self.compute_robust_loss_btl(group_loss, group_count)
else:
actual_loss = per_sample_losses.mean()
weights = None
# update stats
self.update_stats(actual_loss, group_loss, group_acc, group_count, weights)
return actual_loss
def compute_robust_loss(self, group_loss, group_count):
adjusted_loss = group_loss
if torch.all(self.adj>0):
adjusted_loss += self.adj/torch.sqrt(self.group_counts)
if self.normalize_loss:
adjusted_loss = adjusted_loss/(adjusted_loss.sum())
self.adv_probs = self.adv_probs * torch.exp(self.step_size*adjusted_loss.data)
self.adv_probs = self.adv_probs/(self.adv_probs.sum())
# adv_probs is a multiplier i.e. the more a particular group is weighed, the more that group's
# loss is optimized i.e. the more that group participates in optimization.
robust_loss = group_loss @ self.adv_probs
self.group_loss = group_loss
return robust_loss, self.adv_probs
def compute_robust_loss_btl(self, group_loss, group_count):
adjusted_loss = self.exp_avg_loss + self.adj/torch.sqrt(self.group_counts)
return self.compute_robust_loss_greedy(group_loss, adjusted_loss)
def compute_robust_loss_greedy(self, group_loss, ref_loss):
sorted_idx = ref_loss.sort(descending=True)[1]
sorted_loss = group_loss[sorted_idx]
sorted_frac = self.group_frac[sorted_idx]
mask = torch.cumsum(sorted_frac, dim=0)<=self.alpha
weights = mask.float() * sorted_frac /self.alpha
last_idx = mask.sum()
weights[last_idx] = 1 - weights.sum()
weights = sorted_frac*self.min_var_weight + weights*(1-self.min_var_weight)
robust_loss = sorted_loss @ weights
# sort the weights back
_, unsort_idx = sorted_idx.sort()
unsorted_weights = weights[unsort_idx]
return robust_loss, unsorted_weights
def compute_group_avg(self, losses, group_idx, group_distribution=None):
# compute observed counts and mean loss for each group
if self.use_group_weights:
group_count = group_distribution.sum(0)
group_denom = group_count + (group_count==0).float() # avoid nans
group_loss = (group_distribution.transpose(1, 0) @ losses.view(-1))/group_denom
else:
group_map = (group_idx == self._prepare_input(torch.arange(self.n_groups).unsqueeze(1).long())).float()
group_count = group_map.sum(1)
group_denom = group_count + (group_count==0).float() # avoid nans
group_loss = (group_map @ losses.view(-1))/group_denom
return group_loss, group_count
def update_exp_avg_loss(self, group_loss, group_count):
prev_weights = (1 - self.gamma*(group_count>0).float()) * (self.exp_avg_initialized>0).float()
curr_weights = 1 - prev_weights
self.exp_avg_loss = self.exp_avg_loss * prev_weights + group_loss*curr_weights
self.exp_avg_initialized = (self.exp_avg_initialized>0) + (group_count>0)
def reset_stats(self):
self.processed_data_counts = self._prepare_input(torch.zeros(self.n_groups))
self.update_data_counts = self._prepare_input(torch.zeros(self.n_groups))
self.update_batch_counts = self._prepare_input(torch.zeros(self.n_groups))
self.avg_group_loss = self._prepare_input(torch.zeros(self.n_groups))
self.avg_group_acc = self._prepare_input(torch.zeros(self.n_groups))
self.avg_per_sample_loss = 0.
self.avg_actual_loss = 0.
self.avg_acc = 0.
self.batch_count = 0.
def update_stats(self, actual_loss, group_loss, group_acc, group_count, weights=None):
# avg group loss
denom = self.processed_data_counts + group_count
denom += (denom==0).float()
prev_weight = self.processed_data_counts/denom
curr_weight = group_count/denom
self.avg_group_loss = prev_weight*self.avg_group_loss + curr_weight*group_loss
# avg group acc
self.avg_group_acc = prev_weight*self.avg_group_acc + curr_weight*group_acc
# batch-wise average actual loss
denom = self.batch_count + 1
self.avg_actual_loss = (self.batch_count/denom)*self.avg_actual_loss + (1/denom)*actual_loss
# counts
self.processed_data_counts += group_count
if self.is_robust:
self.update_data_counts += group_count*((weights>0).float())
self.update_batch_counts += ((group_count*weights)>0).float()
else:
self.update_data_counts += group_count
self.update_batch_counts += (group_count>0).float()
self.batch_count+=1
# avg per-sample quantities
group_frac = self.processed_data_counts/(self.processed_data_counts.sum())
self.avg_per_sample_loss = group_frac @ self.avg_group_loss
self.avg_acc = group_frac @ self.avg_group_acc
def get_model_stats(self, model, args, stats_dict):
model_norm_sq = 0.
for param in model.parameters():
model_norm_sq += torch.norm(param) ** 2
stats_dict['model_norm_sq'] = model_norm_sq.item()
stats_dict['reg_loss'] = args.weight_decay / 2 * model_norm_sq.item()
return stats_dict
def get_stats(self, model=None, args=None):
stats_dict = {}
for idx in range(self.n_groups):
stats_dict[f'avg_loss_group:{idx}'] = self.avg_group_loss[idx].item()
stats_dict[f'exp_avg_loss_group:{idx}'] = self.exp_avg_loss[idx].item()
stats_dict[f'avg_acc_group:{idx}'] = self.avg_group_acc[idx].item()
stats_dict[f'processed_data_count_group:{idx}'] = self.processed_data_counts[idx].item()
stats_dict[f'update_data_count_group:{idx}'] = self.update_data_counts[idx].item()
stats_dict[f'update_batch_count_group:{idx}'] = self.update_batch_counts[idx].item()
stats_dict['avg_actual_loss'] = self.avg_actual_loss.item()
stats_dict['avg_per_sample_loss'] = self.avg_per_sample_loss.item()
stats_dict['avg_acc'] = self.avg_acc.item()
# Model stats
if model is not None:
assert args is not None
stats_dict = self.get_model_stats(model, args, stats_dict)
return stats_dict
def log_stats(self, logger, is_training):
if logger is None:
return
logger.info(f'Average incurred loss: {self.avg_per_sample_loss.item():.3f} \n')
logger.info(f'Average sample loss: {self.avg_actual_loss.item():.3f} \n')
logger.info(f'Average acc: {self.avg_acc.item():.3f} \n')
for group_idx in range(self.n_groups):
logger.info(
# f' {self.group_str(group_idx)} '
f'[n = {int(self.processed_data_counts[group_idx])}]:\t'
f'loss = {self.avg_group_loss[group_idx]:.3f} '
f'exp loss = {self.exp_avg_loss[group_idx]:.3f} '
f'adjusted loss = {self.exp_avg_loss[group_idx] + self.adj[group_idx]/torch.sqrt(self.group_counts)[group_idx]:.3f} '
f'adv prob = {self.adv_probs[group_idx]:3f} '
f'acc = {self.avg_group_acc[group_idx]:.3f}\n')
# logger.flush()
| 13,663 | 49.795539 | 134 | py |
robust-transformers | robust-transformers-main/src/transformers/modeling_outputs.py | # Copyright 2020 The HuggingFace Team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
from dataclasses import dataclass
from typing import Optional, Tuple
import torch
from .file_utils import ModelOutput
@dataclass
class BaseModelOutput(ModelOutput):
"""
Base class for model's outputs, with potential hidden states and attentions.
Args:
last_hidden_state (`torch.FloatTensor` of shape `(batch_size, sequence_length, hidden_size)`):
Sequence of hidden-states at the output of the last layer of the model.
hidden_states (`tuple(torch.FloatTensor)`, *optional*, returned when `output_hidden_states=True` is passed or when `config.output_hidden_states=True`):
Tuple of `torch.FloatTensor` (one for the output of the embeddings + one for the output of each layer) of
shape `(batch_size, sequence_length, hidden_size)`.
Hidden-states of the model at the output of each layer plus the initial embedding outputs.
attentions (`tuple(torch.FloatTensor)`, *optional*, returned when `output_attentions=True` is passed or when `config.output_attentions=True`):
Tuple of `torch.FloatTensor` (one for each layer) of shape `(batch_size, num_heads, sequence_length,
sequence_length)`.
Attentions weights after the attention softmax, used to compute the weighted average in the self-attention
heads.
"""
last_hidden_state: torch.FloatTensor = None
hidden_states: Optional[Tuple[torch.FloatTensor]] = None
attentions: Optional[Tuple[torch.FloatTensor]] = None
@dataclass
class BaseModelOutputWithNoAttention(ModelOutput):
"""
Base class for model's outputs, with potential hidden states.
Args:
last_hidden_state (`torch.FloatTensor` of shape `(batch_size, num_channels, height, width)`):
Sequence of hidden-states at the output of the last layer of the model.
hidden_states (`tuple(torch.FloatTensor)`, *optional*, returned when `output_hidden_states=True` is passed or when `config.output_hidden_states=True`):
Tuple of `torch.FloatTensor` (one for the output of the embeddings, if the model has an embedding layer, +
one for the output of each layer) of shape `(batch_size, num_channels, height, width)`.
Hidden-states of the model at the output of each layer plus the optional initial embedding outputs.
"""
last_hidden_state: torch.FloatTensor = None
hidden_states: Optional[Tuple[torch.FloatTensor]] = None
@dataclass
class BaseModelOutputWithPoolingAndNoAttention(ModelOutput):
"""
Base class for model's outputs that also contains a pooling of the last hidden states.
Args:
last_hidden_state (`torch.FloatTensor` of shape `(batch_size, num_channels, height, width)`):
Sequence of hidden-states at the output of the last layer of the model.
pooler_output (`torch.FloatTensor` of shape `(batch_size, hidden_size)`):
Last layer hidden-state after a pooling operation on the spatial dimensions.
hidden_states (`tuple(torch.FloatTensor)`, *optional*, returned when `output_hidden_states=True` is passed or when `config.output_hidden_states=True`):
Tuple of `torch.FloatTensor` (one for the output of the embeddings, if the model has an embedding layer, +
one for the output of each layer) of shape `(batch_size, num_channels, height, width)`.
Hidden-states of the model at the output of each layer plus the optional initial embedding outputs.
"""
last_hidden_state: torch.FloatTensor = None
pooler_output: torch.FloatTensor = None
hidden_states: Optional[Tuple[torch.FloatTensor]] = None
@dataclass
class BaseModelOutputWithPooling(ModelOutput):
"""
Base class for model's outputs that also contains a pooling of the last hidden states.
Args:
last_hidden_state (`torch.FloatTensor` of shape `(batch_size, sequence_length, hidden_size)`):
Sequence of hidden-states at the output of the last layer of the model.
pooler_output (`torch.FloatTensor` of shape `(batch_size, hidden_size)`):
Last layer hidden-state of the first token of the sequence (classification token) after further processing
through the layers used for the auxiliary pretraining task. E.g. for BERT-family of models, this returns
the classification token after processing through a linear layer and a tanh activation function. The linear
layer weights are trained from the next sentence prediction (classification) objective during pretraining.
hidden_states (`tuple(torch.FloatTensor)`, *optional*, returned when `output_hidden_states=True` is passed or when `config.output_hidden_states=True`):
Tuple of `torch.FloatTensor` (one for the output of the embeddings + one for the output of each layer) of
shape `(batch_size, sequence_length, hidden_size)`.
Hidden-states of the model at the output of each layer plus the initial embedding outputs.
attentions (`tuple(torch.FloatTensor)`, *optional*, returned when `output_attentions=True` is passed or when `config.output_attentions=True`):
Tuple of `torch.FloatTensor` (one for each layer) of shape `(batch_size, num_heads, sequence_length,
sequence_length)`.
Attentions weights after the attention softmax, used to compute the weighted average in the self-attention
heads.
"""
last_hidden_state: torch.FloatTensor = None
pooler_output: torch.FloatTensor = None
hidden_states: Optional[Tuple[torch.FloatTensor]] = None
attentions: Optional[Tuple[torch.FloatTensor]] = None
@dataclass
class BaseModelOutputWithPast(ModelOutput):
"""
Base class for model's outputs that may also contain a past key/values (to speed up sequential decoding).
Args:
last_hidden_state (`torch.FloatTensor` of shape `(batch_size, sequence_length, hidden_size)`):
Sequence of hidden-states at the output of the last layer of the model.
If `past_key_values` is used only the last hidden-state of the sequences of shape `(batch_size, 1,
hidden_size)` is output.
past_key_values (`tuple(tuple(torch.FloatTensor))`, *optional*, returned when `use_cache=True` is passed or when `config.use_cache=True`):
Tuple of `tuple(torch.FloatTensor)` of length `config.n_layers`, with each tuple having 2 tensors of shape
`(batch_size, num_heads, sequence_length, embed_size_per_head)`) and optionally if
`config.is_encoder_decoder=True` 2 additional tensors of shape `(batch_size, num_heads,
encoder_sequence_length, embed_size_per_head)`.
Contains pre-computed hidden-states (key and values in the self-attention blocks and optionally if
`config.is_encoder_decoder=True` in the cross-attention blocks) that can be used (see `past_key_values`
input) to speed up sequential decoding.
hidden_states (`tuple(torch.FloatTensor)`, *optional*, returned when `output_hidden_states=True` is passed or when `config.output_hidden_states=True`):
Tuple of `torch.FloatTensor` (one for the output of the embeddings + one for the output of each layer) of
shape `(batch_size, sequence_length, hidden_size)`.
Hidden-states of the model at the output of each layer plus the initial embedding outputs.
attentions (`tuple(torch.FloatTensor)`, *optional*, returned when `output_attentions=True` is passed or when `config.output_attentions=True`):
Tuple of `torch.FloatTensor` (one for each layer) of shape `(batch_size, num_heads, sequence_length,
sequence_length)`.
Attentions weights after the attention softmax, used to compute the weighted average in the self-attention
heads.
"""
last_hidden_state: torch.FloatTensor = None
past_key_values: Optional[Tuple[Tuple[torch.FloatTensor]]] = None
hidden_states: Optional[Tuple[torch.FloatTensor]] = None
attentions: Optional[Tuple[torch.FloatTensor]] = None
@dataclass
class BaseModelOutputWithCrossAttentions(ModelOutput):
"""
Base class for model's outputs, with potential hidden states and attentions.
Args:
last_hidden_state (`torch.FloatTensor` of shape `(batch_size, sequence_length, hidden_size)`):
Sequence of hidden-states at the output of the last layer of the model.
hidden_states (`tuple(torch.FloatTensor)`, *optional*, returned when `output_hidden_states=True` is passed or when `config.output_hidden_states=True`):
Tuple of `torch.FloatTensor` (one for the output of the embeddings + one for the output of each layer) of
shape `(batch_size, sequence_length, hidden_size)`.
Hidden-states of the model at the output of each layer plus the initial embedding outputs.
attentions (`tuple(torch.FloatTensor)`, *optional*, returned when `output_attentions=True` is passed or when `config.output_attentions=True`):
Tuple of `torch.FloatTensor` (one for each layer) of shape `(batch_size, num_heads, sequence_length,
sequence_length)`.
Attentions weights after the attention softmax, used to compute the weighted average in the self-attention
heads.
cross_attentions (`tuple(torch.FloatTensor)`, *optional*, returned when `output_attentions=True` and `config.add_cross_attention=True` is passed or when `config.output_attentions=True`):
Tuple of `torch.FloatTensor` (one for each layer) of shape `(batch_size, num_heads, sequence_length,
sequence_length)`.
Attentions weights of the decoder's cross-attention layer, after the attention softmax, used to compute the
weighted average in the cross-attention heads.
"""
last_hidden_state: torch.FloatTensor = None
hidden_states: Optional[Tuple[torch.FloatTensor]] = None
attentions: Optional[Tuple[torch.FloatTensor]] = None
cross_attentions: Optional[Tuple[torch.FloatTensor]] = None
@dataclass
class BaseModelOutputWithPoolingAndCrossAttentions(ModelOutput):
"""
Base class for model's outputs that also contains a pooling of the last hidden states.
Args:
last_hidden_state (`torch.FloatTensor` of shape `(batch_size, sequence_length, hidden_size)`):
Sequence of hidden-states at the output of the last layer of the model.
pooler_output (`torch.FloatTensor` of shape `(batch_size, hidden_size)`):
Last layer hidden-state of the first token of the sequence (classification token) after further processing
through the layers used for the auxiliary pretraining task. E.g. for BERT-family of models, this returns
the classification token after processing through a linear layer and a tanh activation function. The linear
layer weights are trained from the next sentence prediction (classification) objective during pretraining.
hidden_states (`tuple(torch.FloatTensor)`, *optional*, returned when `output_hidden_states=True` is passed or when `config.output_hidden_states=True`):
Tuple of `torch.FloatTensor` (one for the output of the embeddings + one for the output of each layer) of
shape `(batch_size, sequence_length, hidden_size)`.
Hidden-states of the model at the output of each layer plus the initial embedding outputs.
attentions (`tuple(torch.FloatTensor)`, *optional*, returned when `output_attentions=True` is passed or when `config.output_attentions=True`):
Tuple of `torch.FloatTensor` (one for each layer) of shape `(batch_size, num_heads, sequence_length,
sequence_length)`.
Attentions weights after the attention softmax, used to compute the weighted average in the self-attention
heads.
cross_attentions (`tuple(torch.FloatTensor)`, *optional*, returned when `output_attentions=True` and `config.add_cross_attention=True` is passed or when `config.output_attentions=True`):
Tuple of `torch.FloatTensor` (one for each layer) of shape `(batch_size, num_heads, sequence_length,
sequence_length)`.
Attentions weights of the decoder's cross-attention layer, after the attention softmax, used to compute the
weighted average in the cross-attention heads.
past_key_values (`tuple(tuple(torch.FloatTensor))`, *optional*, returned when `use_cache=True` is passed or when `config.use_cache=True`):
Tuple of `tuple(torch.FloatTensor)` of length `config.n_layers`, with each tuple having 2 tensors of shape
`(batch_size, num_heads, sequence_length, embed_size_per_head)`) and optionally if
`config.is_encoder_decoder=True` 2 additional tensors of shape `(batch_size, num_heads,
encoder_sequence_length, embed_size_per_head)`.
Contains pre-computed hidden-states (key and values in the self-attention blocks and optionally if
`config.is_encoder_decoder=True` in the cross-attention blocks) that can be used (see `past_key_values`
input) to speed up sequential decoding.
"""
last_hidden_state: torch.FloatTensor = None
pooler_output: torch.FloatTensor = None
hidden_states: Optional[Tuple[torch.FloatTensor]] = None
past_key_values: Optional[Tuple[Tuple[torch.FloatTensor]]] = None
attentions: Optional[Tuple[torch.FloatTensor]] = None
cross_attentions: Optional[Tuple[torch.FloatTensor]] = None
@dataclass
class BaseModelOutputWithPastAndCrossAttentions(ModelOutput):
"""
Base class for model's outputs that may also contain a past key/values (to speed up sequential decoding).
Args:
last_hidden_state (`torch.FloatTensor` of shape `(batch_size, sequence_length, hidden_size)`):
Sequence of hidden-states at the output of the last layer of the model.
If `past_key_values` is used only the last hidden-state of the sequences of shape `(batch_size, 1,
hidden_size)` is output.
past_key_values (`tuple(tuple(torch.FloatTensor))`, *optional*, returned when `use_cache=True` is passed or when `config.use_cache=True`):
Tuple of `tuple(torch.FloatTensor)` of length `config.n_layers`, with each tuple having 2 tensors of shape
`(batch_size, num_heads, sequence_length, embed_size_per_head)`) and optionally if
`config.is_encoder_decoder=True` 2 additional tensors of shape `(batch_size, num_heads,
encoder_sequence_length, embed_size_per_head)`.
Contains pre-computed hidden-states (key and values in the self-attention blocks and optionally if
`config.is_encoder_decoder=True` in the cross-attention blocks) that can be used (see `past_key_values`
input) to speed up sequential decoding.
hidden_states (`tuple(torch.FloatTensor)`, *optional*, returned when `output_hidden_states=True` is passed or when `config.output_hidden_states=True`):
Tuple of `torch.FloatTensor` (one for the output of the embeddings + one for the output of each layer) of
shape `(batch_size, sequence_length, hidden_size)`.
Hidden-states of the model at the output of each layer plus the initial embedding outputs.
attentions (`tuple(torch.FloatTensor)`, *optional*, returned when `output_attentions=True` is passed or when `config.output_attentions=True`):
Tuple of `torch.FloatTensor` (one for each layer) of shape `(batch_size, num_heads, sequence_length,
sequence_length)`.
Attentions weights after the attention softmax, used to compute the weighted average in the self-attention
heads.
cross_attentions (`tuple(torch.FloatTensor)`, *optional*, returned when `output_attentions=True` and `config.add_cross_attention=True` is passed or when `config.output_attentions=True`):
Tuple of `torch.FloatTensor` (one for each layer) of shape `(batch_size, num_heads, sequence_length,
sequence_length)`.
Attentions weights of the decoder's cross-attention layer, after the attention softmax, used to compute the
weighted average in the cross-attention heads.
"""
last_hidden_state: torch.FloatTensor = None
past_key_values: Optional[Tuple[Tuple[torch.FloatTensor]]] = None
hidden_states: Optional[Tuple[torch.FloatTensor]] = None
attentions: Optional[Tuple[torch.FloatTensor]] = None
cross_attentions: Optional[Tuple[torch.FloatTensor]] = None
@dataclass
class Seq2SeqModelOutput(ModelOutput):
"""
Base class for model encoder's outputs that also contains : pre-computed hidden states that can speed up sequential
decoding.
Args:
last_hidden_state (`torch.FloatTensor` of shape `(batch_size, sequence_length, hidden_size)`):
Sequence of hidden-states at the output of the last layer of the decoder of the model.
If `past_key_values` is used only the last hidden-state of the sequences of shape `(batch_size, 1,
hidden_size)` is output.
past_key_values (`tuple(tuple(torch.FloatTensor))`, *optional*, returned when `use_cache=True` is passed or when `config.use_cache=True`):
Tuple of `tuple(torch.FloatTensor)` of length `config.n_layers`, with each tuple having 2 tensors of shape
`(batch_size, num_heads, sequence_length, embed_size_per_head)`) and 2 additional tensors of shape
`(batch_size, num_heads, encoder_sequence_length, embed_size_per_head)`.
Contains pre-computed hidden-states (key and values in the self-attention blocks and in the cross-attention
blocks) that can be used (see `past_key_values` input) to speed up sequential decoding.
decoder_hidden_states (`tuple(torch.FloatTensor)`, *optional*, returned when `output_hidden_states=True` is passed or when `config.output_hidden_states=True`):
Tuple of `torch.FloatTensor` (one for the output of the embeddings + one for the output of each layer) of
shape `(batch_size, sequence_length, hidden_size)`.
Hidden-states of the decoder at the output of each layer plus the initial embedding outputs.
decoder_attentions (`tuple(torch.FloatTensor)`, *optional*, returned when `output_attentions=True` is passed or when `config.output_attentions=True`):
Tuple of `torch.FloatTensor` (one for each layer) of shape `(batch_size, num_heads, sequence_length,
sequence_length)`.
Attentions weights of the decoder, after the attention softmax, used to compute the weighted average in the
self-attention heads.
cross_attentions (`tuple(torch.FloatTensor)`, *optional*, returned when `output_attentions=True` is passed or when `config.output_attentions=True`):
Tuple of `torch.FloatTensor` (one for each layer) of shape `(batch_size, num_heads, sequence_length,
sequence_length)`.
Attentions weights of the decoder's cross-attention layer, after the attention softmax, used to compute the
weighted average in the cross-attention heads.
encoder_last_hidden_state (`torch.FloatTensor` of shape `(batch_size, sequence_length, hidden_size)`, *optional*):
Sequence of hidden-states at the output of the last layer of the encoder of the model.
encoder_hidden_states (`tuple(torch.FloatTensor)`, *optional*, returned when `output_hidden_states=True` is passed or when `config.output_hidden_states=True`):
Tuple of `torch.FloatTensor` (one for the output of the embeddings + one for the output of each layer) of
shape `(batch_size, sequence_length, hidden_size)`.
Hidden-states of the encoder at the output of each layer plus the initial embedding outputs.
encoder_attentions (`tuple(torch.FloatTensor)`, *optional*, returned when `output_attentions=True` is passed or when `config.output_attentions=True`):
Tuple of `torch.FloatTensor` (one for each layer) of shape `(batch_size, num_heads, sequence_length,
sequence_length)`.
Attentions weights of the encoder, after the attention softmax, used to compute the weighted average in the
self-attention heads.
"""
last_hidden_state: torch.FloatTensor = None
past_key_values: Optional[Tuple[Tuple[torch.FloatTensor]]] = None
decoder_hidden_states: Optional[Tuple[torch.FloatTensor]] = None
decoder_attentions: Optional[Tuple[torch.FloatTensor]] = None
cross_attentions: Optional[Tuple[torch.FloatTensor]] = None
encoder_last_hidden_state: Optional[torch.FloatTensor] = None
encoder_hidden_states: Optional[Tuple[torch.FloatTensor]] = None
encoder_attentions: Optional[Tuple[torch.FloatTensor]] = None
@dataclass
class CausalLMOutput(ModelOutput):
"""
Base class for causal language model (or autoregressive) outputs.
Args:
loss (`torch.FloatTensor` of shape `(1,)`, *optional*, returned when `labels` is provided):
Language modeling loss (for next-token prediction).
logits (`torch.FloatTensor` of shape `(batch_size, sequence_length, config.vocab_size)`):
Prediction scores of the language modeling head (scores for each vocabulary token before SoftMax).
hidden_states (`tuple(torch.FloatTensor)`, *optional*, returned when `output_hidden_states=True` is passed or when `config.output_hidden_states=True`):
Tuple of `torch.FloatTensor` (one for the output of the embeddings + one for the output of each layer) of
shape `(batch_size, sequence_length, hidden_size)`.
Hidden-states of the model at the output of each layer plus the initial embedding outputs.
attentions (`tuple(torch.FloatTensor)`, *optional*, returned when `output_attentions=True` is passed or when `config.output_attentions=True`):
Tuple of `torch.FloatTensor` (one for each layer) of shape `(batch_size, num_heads, sequence_length,
sequence_length)`.
Attentions weights after the attention softmax, used to compute the weighted average in the self-attention
heads.
"""
loss: Optional[torch.FloatTensor] = None
logits: torch.FloatTensor = None
hidden_states: Optional[Tuple[torch.FloatTensor]] = None
attentions: Optional[Tuple[torch.FloatTensor]] = None
@dataclass
class CausalLMOutputWithPast(ModelOutput):
"""
Base class for causal language model (or autoregressive) outputs.
Args:
loss (`torch.FloatTensor` of shape `(1,)`, *optional*, returned when `labels` is provided):
Language modeling loss (for next-token prediction).
logits (`torch.FloatTensor` of shape `(batch_size, sequence_length, config.vocab_size)`):
Prediction scores of the language modeling head (scores for each vocabulary token before SoftMax).
past_key_values (`tuple(tuple(torch.FloatTensor))`, *optional*, returned when `use_cache=True` is passed or when `config.use_cache=True`):
Tuple of `tuple(torch.FloatTensor)` of length `config.n_layers`, with each tuple having 2 tensors of shape
`(batch_size, num_heads, sequence_length, embed_size_per_head)`)
Contains pre-computed hidden-states (key and values in the self-attention blocks) that can be used (see
`past_key_values` input) to speed up sequential decoding.
hidden_states (`tuple(torch.FloatTensor)`, *optional*, returned when `output_hidden_states=True` is passed or when `config.output_hidden_states=True`):
Tuple of `torch.FloatTensor` (one for the output of the embeddings + one for the output of each layer) of
shape `(batch_size, sequence_length, hidden_size)`.
Hidden-states of the model at the output of each layer plus the initial embedding outputs.
attentions (`tuple(torch.FloatTensor)`, *optional*, returned when `output_attentions=True` is passed or when `config.output_attentions=True`):
Tuple of `torch.FloatTensor` (one for each layer) of shape `(batch_size, num_heads, sequence_length,
sequence_length)`.
Attentions weights after the attention softmax, used to compute the weighted average in the self-attention
heads.
"""
loss: Optional[torch.FloatTensor] = None
logits: torch.FloatTensor = None
past_key_values: Optional[Tuple[Tuple[torch.FloatTensor]]] = None
hidden_states: Optional[Tuple[torch.FloatTensor]] = None
attentions: Optional[Tuple[torch.FloatTensor]] = None
@dataclass
class CausalLMOutputWithCrossAttentions(ModelOutput):
"""
Base class for causal language model (or autoregressive) outputs.
Args:
loss (`torch.FloatTensor` of shape `(1,)`, *optional*, returned when `labels` is provided):
Language modeling loss (for next-token prediction).
logits (`torch.FloatTensor` of shape `(batch_size, sequence_length, config.vocab_size)`):
Prediction scores of the language modeling head (scores for each vocabulary token before SoftMax).
hidden_states (`tuple(torch.FloatTensor)`, *optional*, returned when `output_hidden_states=True` is passed or when `config.output_hidden_states=True`):
Tuple of `torch.FloatTensor` (one for the output of the embeddings + one for the output of each layer) of
shape `(batch_size, sequence_length, hidden_size)`.
Hidden-states of the model at the output of each layer plus the initial embedding outputs.
attentions (`tuple(torch.FloatTensor)`, *optional*, returned when `output_attentions=True` is passed or when `config.output_attentions=True`):
Tuple of `torch.FloatTensor` (one for each layer) of shape `(batch_size, num_heads, sequence_length,
sequence_length)`.
Attentions weights after the attention softmax, used to compute the weighted average in the self-attention
heads.
cross_attentions (`tuple(torch.FloatTensor)`, *optional*, returned when `output_attentions=True` is passed or when `config.output_attentions=True`):
Tuple of `torch.FloatTensor` (one for each layer) of shape `(batch_size, num_heads, sequence_length,
sequence_length)`.
Cross attentions weights after the attention softmax, used to compute the weighted average in the
cross-attention heads.
past_key_values (`tuple(tuple(torch.FloatTensor))`, *optional*, returned when `use_cache=True` is passed or when `config.use_cache=True`):
Tuple of `torch.FloatTensor` tuples of length `config.n_layers`, with each tuple containing the cached key,
value states of the self-attention and the cross-attention layers if model is used in encoder-decoder
setting. Only relevant if `config.is_decoder = True`.
Contains pre-computed hidden-states (key and values in the attention blocks) that can be used (see
`past_key_values` input) to speed up sequential decoding.
"""
loss: Optional[torch.FloatTensor] = None
logits: torch.FloatTensor = None
past_key_values: Optional[Tuple[Tuple[torch.FloatTensor]]] = None
hidden_states: Optional[Tuple[torch.FloatTensor]] = None
attentions: Optional[Tuple[torch.FloatTensor]] = None
cross_attentions: Optional[Tuple[torch.FloatTensor]] = None
@dataclass
class SequenceClassifierOutputWithPast(ModelOutput):
"""
Base class for outputs of sentence classification models.
Args:
loss (`torch.FloatTensor` of shape `(1,)`, *optional*, returned when `labels` is provided):
Classification (or regression if config.num_labels==1) loss.
logits (`torch.FloatTensor` of shape `(batch_size, config.num_labels)`):
Classification (or regression if config.num_labels==1) scores (before SoftMax).
past_key_values (`tuple(tuple(torch.FloatTensor))`, *optional*, returned when `use_cache=True` is passed or when `config.use_cache=True`):
Tuple of `tuple(torch.FloatTensor)` of length `config.n_layers`, with each tuple having 2 tensors of shape
`(batch_size, num_heads, sequence_length, embed_size_per_head)`)
Contains pre-computed hidden-states (key and values in the self-attention blocks) that can be used (see
`past_key_values` input) to speed up sequential decoding.
hidden_states (`tuple(torch.FloatTensor)`, *optional*, returned when `output_hidden_states=True` is passed or when `config.output_hidden_states=True`):
Tuple of `torch.FloatTensor` (one for the output of the embeddings + one for the output of each layer) of
shape `(batch_size, sequence_length, hidden_size)`.
Hidden-states of the model at the output of each layer plus the initial embedding outputs.
attentions (`tuple(torch.FloatTensor)`, *optional*, returned when `output_attentions=True` is passed or when `config.output_attentions=True`):
Tuple of `torch.FloatTensor` (one for each layer) of shape `(batch_size, num_heads, sequence_length,
sequence_length)`.
Attentions weights after the attention softmax, used to compute the weighted average in the self-attention
heads.
"""
loss: Optional[torch.FloatTensor] = None
logits: torch.FloatTensor = None
past_key_values: Optional[Tuple[Tuple[torch.FloatTensor]]] = None
hidden_states: Optional[Tuple[torch.FloatTensor]] = None
attentions: Optional[Tuple[torch.FloatTensor]] = None
@dataclass
class MaskedLMOutput(ModelOutput):
"""
Base class for masked language models outputs.
Args:
loss (`torch.FloatTensor` of shape `(1,)`, *optional*, returned when `labels` is provided):
Masked language modeling (MLM) loss.
logits (`torch.FloatTensor` of shape `(batch_size, sequence_length, config.vocab_size)`):
Prediction scores of the language modeling head (scores for each vocabulary token before SoftMax).
hidden_states (`tuple(torch.FloatTensor)`, *optional*, returned when `output_hidden_states=True` is passed or when `config.output_hidden_states=True`):
Tuple of `torch.FloatTensor` (one for the output of the embeddings + one for the output of each layer) of
shape `(batch_size, sequence_length, hidden_size)`.
Hidden-states of the model at the output of each layer plus the initial embedding outputs.
attentions (`tuple(torch.FloatTensor)`, *optional*, returned when `output_attentions=True` is passed or when `config.output_attentions=True`):
Tuple of `torch.FloatTensor` (one for each layer) of shape `(batch_size, num_heads, sequence_length,
sequence_length)`.
Attentions weights after the attention softmax, used to compute the weighted average in the self-attention
heads.
"""
loss: Optional[torch.FloatTensor] = None
logits: torch.FloatTensor = None
hidden_states: Optional[Tuple[torch.FloatTensor]] = None
attentions: Optional[Tuple[torch.FloatTensor]] = None
@dataclass
class Seq2SeqLMOutput(ModelOutput):
"""
Base class for sequence-to-sequence language models outputs.
Args:
loss (`torch.FloatTensor` of shape `(1,)`, *optional*, returned when `labels` is provided):
Language modeling loss.
logits (`torch.FloatTensor` of shape `(batch_size, sequence_length, config.vocab_size)`):
Prediction scores of the language modeling head (scores for each vocabulary token before SoftMax).
past_key_values (`tuple(tuple(torch.FloatTensor))`, *optional*, returned when `use_cache=True` is passed or when `config.use_cache=True`):
Tuple of `tuple(torch.FloatTensor)` of length `config.n_layers`, with each tuple having 2 tensors of shape
`(batch_size, num_heads, sequence_length, embed_size_per_head)`) and 2 additional tensors of shape
`(batch_size, num_heads, encoder_sequence_length, embed_size_per_head)`.
Contains pre-computed hidden-states (key and values in the self-attention blocks and in the cross-attention
blocks) that can be used (see `past_key_values` input) to speed up sequential decoding.
decoder_hidden_states (`tuple(torch.FloatTensor)`, *optional*, returned when `output_hidden_states=True` is passed or when `config.output_hidden_states=True`):
Tuple of `torch.FloatTensor` (one for the output of the embeddings + one for the output of each layer) of
shape `(batch_size, sequence_length, hidden_size)`.
Hidden-states of the decoder at the output of each layer plus the initial embedding outputs.
decoder_attentions (`tuple(torch.FloatTensor)`, *optional*, returned when `output_attentions=True` is passed or when `config.output_attentions=True`):
Tuple of `torch.FloatTensor` (one for each layer) of shape `(batch_size, num_heads, sequence_length,
sequence_length)`.
Attentions weights of the decoder, after the attention softmax, used to compute the weighted average in the
self-attention heads.
cross_attentions (`tuple(torch.FloatTensor)`, *optional*, returned when `output_attentions=True` is passed or when `config.output_attentions=True`):
Tuple of `torch.FloatTensor` (one for each layer) of shape `(batch_size, num_heads, sequence_length,
sequence_length)`.
Attentions weights of the decoder's cross-attention layer, after the attention softmax, used to compute the
weighted average in the cross-attention heads.
encoder_last_hidden_state (`torch.FloatTensor` of shape `(batch_size, sequence_length, hidden_size)`, *optional*):
Sequence of hidden-states at the output of the last layer of the encoder of the model.
encoder_hidden_states (`tuple(torch.FloatTensor)`, *optional*, returned when `output_hidden_states=True` is passed or when `config.output_hidden_states=True`):
Tuple of `torch.FloatTensor` (one for the output of the embeddings + one for the output of each layer) of
shape `(batch_size, sequence_length, hidden_size)`.
Hidden-states of the encoder at the output of each layer plus the initial embedding outputs.
encoder_attentions (`tuple(torch.FloatTensor)`, *optional*, returned when `output_attentions=True` is passed or when `config.output_attentions=True`):
Tuple of `torch.FloatTensor` (one for each layer) of shape `(batch_size, num_heads, sequence_length,
sequence_length)`.
Attentions weights of the encoder, after the attention softmax, used to compute the weighted average in the
self-attention heads.
"""
loss: Optional[torch.FloatTensor] = None
logits: torch.FloatTensor = None
past_key_values: Optional[Tuple[Tuple[torch.FloatTensor]]] = None
decoder_hidden_states: Optional[Tuple[torch.FloatTensor]] = None
decoder_attentions: Optional[Tuple[torch.FloatTensor]] = None
cross_attentions: Optional[Tuple[torch.FloatTensor]] = None
encoder_last_hidden_state: Optional[torch.FloatTensor] = None
encoder_hidden_states: Optional[Tuple[torch.FloatTensor]] = None
encoder_attentions: Optional[Tuple[torch.FloatTensor]] = None
@dataclass
class NextSentencePredictorOutput(ModelOutput):
"""
Base class for outputs of models predicting if two sentences are consecutive or not.
Args:
loss (`torch.FloatTensor` of shape `(1,)`, *optional*, returned when `next_sentence_label` is provided):
Next sequence prediction (classification) loss.
logits (`torch.FloatTensor` of shape `(batch_size, 2)`):
Prediction scores of the next sequence prediction (classification) head (scores of True/False continuation
before SoftMax).
hidden_states (`tuple(torch.FloatTensor)`, *optional*, returned when `output_hidden_states=True` is passed or when `config.output_hidden_states=True`):
Tuple of `torch.FloatTensor` (one for the output of the embeddings + one for the output of each layer) of
shape `(batch_size, sequence_length, hidden_size)`.
Hidden-states of the model at the output of each layer plus the initial embedding outputs.
attentions (`tuple(torch.FloatTensor)`, *optional*, returned when `output_attentions=True` is passed or when `config.output_attentions=True`):
Tuple of `torch.FloatTensor` (one for each layer) of shape `(batch_size, num_heads, sequence_length,
sequence_length)`.
Attentions weights after the attention softmax, used to compute the weighted average in the self-attention
heads.
"""
loss: Optional[torch.FloatTensor] = None
logits: torch.FloatTensor = None
hidden_states: Optional[Tuple[torch.FloatTensor]] = None
attentions: Optional[Tuple[torch.FloatTensor]] = None
@dataclass
class SequenceClassifierOutput(ModelOutput):
"""
Base class for outputs of sentence classification models.
Args:
loss (`torch.FloatTensor` of shape `(1,)`, *optional*, returned when `labels` is provided):
Classification (or regression if config.num_labels==1) loss.
logits (`torch.FloatTensor` of shape `(batch_size, config.num_labels)`):
Classification (or regression if config.num_labels==1) scores (before SoftMax).
hidden_states (`tuple(torch.FloatTensor)`, *optional*, returned when `output_hidden_states=True` is passed or when `config.output_hidden_states=True`):
Tuple of `torch.FloatTensor` (one for the output of the embeddings + one for the output of each layer) of
shape `(batch_size, sequence_length, hidden_size)`.
Hidden-states of the model at the output of each layer plus the initial embedding outputs.
attentions (`tuple(torch.FloatTensor)`, *optional*, returned when `output_attentions=True` is passed or when `config.output_attentions=True`):
Tuple of `torch.FloatTensor` (one for each layer) of shape `(batch_size, num_heads, sequence_length,
sequence_length)`.
Attentions weights after the attention softmax, used to compute the weighted average in the self-attention
heads.
"""
loss: Optional[torch.FloatTensor] = None
logits: torch.FloatTensor = None
hidden_states: Optional[Tuple[torch.FloatTensor]] = None
attentions: Optional[Tuple[torch.FloatTensor]] = None
@dataclass
class Seq2SeqSequenceClassifierOutput(ModelOutput):
"""
Base class for outputs of sequence-to-sequence sentence classification models.
Args:
loss (`torch.FloatTensor` of shape `(1,)`, *optional*, returned when `label` is provided):
Classification (or regression if config.num_labels==1) loss.
logits (`torch.FloatTensor` of shape `(batch_size, config.num_labels)`):
Classification (or regression if config.num_labels==1) scores (before SoftMax).
past_key_values (`tuple(tuple(torch.FloatTensor))`, *optional*, returned when `use_cache=True` is passed or when `config.use_cache=True`):
Tuple of `tuple(torch.FloatTensor)` of length `config.n_layers`, with each tuple having 2 tensors of shape
`(batch_size, num_heads, sequence_length, embed_size_per_head)`) and 2 additional tensors of shape
`(batch_size, num_heads, encoder_sequence_length, embed_size_per_head)`.
Contains pre-computed hidden-states (key and values in the self-attention blocks and in the cross-attention
blocks) that can be used (see `past_key_values` input) to speed up sequential decoding.
decoder_hidden_states (`tuple(torch.FloatTensor)`, *optional*, returned when `output_hidden_states=True` is passed or when `config.output_hidden_states=True`):
Tuple of `torch.FloatTensor` (one for the output of the embeddings + one for the output of each layer) of
shape `(batch_size, sequence_length, hidden_size)`.
Hidden-states of the decoder at the output of each layer plus the initial embedding outputs.
decoder_attentions (`tuple(torch.FloatTensor)`, *optional*, returned when `output_attentions=True` is passed or when `config.output_attentions=True`):
Tuple of `torch.FloatTensor` (one for each layer) of shape `(batch_size, num_heads, sequence_length,
sequence_length)`.
Attentions weights of the decoder, after the attention softmax, used to compute the weighted average in the
self-attention heads.
cross_attentions (`tuple(torch.FloatTensor)`, *optional*, returned when `output_attentions=True` is passed or when `config.output_attentions=True`):
Tuple of `torch.FloatTensor` (one for each layer) of shape `(batch_size, num_heads, sequence_length,
sequence_length)`.
Attentions weights of the decoder's cross-attention layer, after the attention softmax, used to compute the
weighted average in the cross-attention heads.
encoder_last_hidden_state (`torch.FloatTensor` of shape `(batch_size, sequence_length, hidden_size)`, *optional*):
Sequence of hidden-states at the output of the last layer of the encoder of the model.
encoder_hidden_states (`tuple(torch.FloatTensor)`, *optional*, returned when `output_hidden_states=True` is passed or when `config.output_hidden_states=True`):
Tuple of `torch.FloatTensor` (one for the output of the embeddings + one for the output of each layer) of
shape `(batch_size, sequence_length, hidden_size)`.
Hidden-states of the encoder at the output of each layer plus the initial embedding outputs.
encoder_attentions (`tuple(torch.FloatTensor)`, *optional*, returned when `output_attentions=True` is passed or when `config.output_attentions=True`):
Tuple of `torch.FloatTensor` (one for each layer) of shape `(batch_size, num_heads, sequence_length,
sequence_length)`.
Attentions weights of the encoder, after the attention softmax, used to compute the weighted average in the
self-attention heads.
"""
loss: Optional[torch.FloatTensor] = None
logits: torch.FloatTensor = None
past_key_values: Optional[Tuple[Tuple[torch.FloatTensor]]] = None
decoder_hidden_states: Optional[Tuple[torch.FloatTensor]] = None
decoder_attentions: Optional[Tuple[torch.FloatTensor]] = None
cross_attentions: Optional[Tuple[torch.FloatTensor]] = None
encoder_last_hidden_state: Optional[torch.FloatTensor] = None
encoder_hidden_states: Optional[Tuple[torch.FloatTensor]] = None
encoder_attentions: Optional[Tuple[torch.FloatTensor]] = None
@dataclass
class MultipleChoiceModelOutput(ModelOutput):
"""
Base class for outputs of multiple choice models.
Args:
loss (`torch.FloatTensor` of shape *(1,)*, *optional*, returned when `labels` is provided):
Classification loss.
logits (`torch.FloatTensor` of shape `(batch_size, num_choices)`):
*num_choices* is the second dimension of the input tensors. (see *input_ids* above).
Classification scores (before SoftMax).
hidden_states (`tuple(torch.FloatTensor)`, *optional*, returned when `output_hidden_states=True` is passed or when `config.output_hidden_states=True`):
Tuple of `torch.FloatTensor` (one for the output of the embeddings + one for the output of each layer) of
shape `(batch_size, sequence_length, hidden_size)`.
Hidden-states of the model at the output of each layer plus the initial embedding outputs.
attentions (`tuple(torch.FloatTensor)`, *optional*, returned when `output_attentions=True` is passed or when `config.output_attentions=True`):
Tuple of `torch.FloatTensor` (one for each layer) of shape `(batch_size, num_heads, sequence_length,
sequence_length)`.
Attentions weights after the attention softmax, used to compute the weighted average in the self-attention
heads.
"""
loss: Optional[torch.FloatTensor] = None
logits: torch.FloatTensor = None
hidden_states: Optional[Tuple[torch.FloatTensor]] = None
attentions: Optional[Tuple[torch.FloatTensor]] = None
@dataclass
class TokenClassifierOutput(ModelOutput):
"""
Base class for outputs of token classification models.
Args:
loss (`torch.FloatTensor` of shape `(1,)`, *optional*, returned when `labels` is provided) :
Classification loss.
logits (`torch.FloatTensor` of shape `(batch_size, sequence_length, config.num_labels)`):
Classification scores (before SoftMax).
hidden_states (`tuple(torch.FloatTensor)`, *optional*, returned when `output_hidden_states=True` is passed or when `config.output_hidden_states=True`):
Tuple of `torch.FloatTensor` (one for the output of the embeddings + one for the output of each layer) of
shape `(batch_size, sequence_length, hidden_size)`.
Hidden-states of the model at the output of each layer plus the initial embedding outputs.
attentions (`tuple(torch.FloatTensor)`, *optional*, returned when `output_attentions=True` is passed or when `config.output_attentions=True`):
Tuple of `torch.FloatTensor` (one for each layer) of shape `(batch_size, num_heads, sequence_length,
sequence_length)`.
Attentions weights after the attention softmax, used to compute the weighted average in the self-attention
heads.
"""
loss: Optional[torch.FloatTensor] = None
logits: torch.FloatTensor = None
hidden_states: Optional[Tuple[torch.FloatTensor]] = None
attentions: Optional[Tuple[torch.FloatTensor]] = None
@dataclass
class QuestionAnsweringModelOutput(ModelOutput):
"""
Base class for outputs of question answering models.
Args:
loss (`torch.FloatTensor` of shape `(1,)`, *optional*, returned when `labels` is provided):
Total span extraction loss is the sum of a Cross-Entropy for the start and end positions.
start_logits (`torch.FloatTensor` of shape `(batch_size, sequence_length)`):
Span-start scores (before SoftMax).
end_logits (`torch.FloatTensor` of shape `(batch_size, sequence_length)`):
Span-end scores (before SoftMax).
hidden_states (`tuple(torch.FloatTensor)`, *optional*, returned when `output_hidden_states=True` is passed or when `config.output_hidden_states=True`):
Tuple of `torch.FloatTensor` (one for the output of the embeddings + one for the output of each layer) of
shape `(batch_size, sequence_length, hidden_size)`.
Hidden-states of the model at the output of each layer plus the initial embedding outputs.
attentions (`tuple(torch.FloatTensor)`, *optional*, returned when `output_attentions=True` is passed or when `config.output_attentions=True`):
Tuple of `torch.FloatTensor` (one for each layer) of shape `(batch_size, num_heads, sequence_length,
sequence_length)`.
Attentions weights after the attention softmax, used to compute the weighted average in the self-attention
heads.
"""
loss: Optional[torch.FloatTensor] = None
start_logits: torch.FloatTensor = None
end_logits: torch.FloatTensor = None
hidden_states: Optional[Tuple[torch.FloatTensor]] = None
attentions: Optional[Tuple[torch.FloatTensor]] = None
@dataclass
class Seq2SeqQuestionAnsweringModelOutput(ModelOutput):
"""
Base class for outputs of sequence-to-sequence question answering models.
Args:
loss (`torch.FloatTensor` of shape `(1,)`, *optional*, returned when `labels` is provided):
Total span extraction loss is the sum of a Cross-Entropy for the start and end positions.
start_logits (`torch.FloatTensor` of shape `(batch_size, sequence_length)`):
Span-start scores (before SoftMax).
end_logits (`torch.FloatTensor` of shape `(batch_size, sequence_length)`):
Span-end scores (before SoftMax).
past_key_values (`tuple(tuple(torch.FloatTensor))`, *optional*, returned when `use_cache=True` is passed or when `config.use_cache=True`):
Tuple of `tuple(torch.FloatTensor)` of length `config.n_layers`, with each tuple having 2 tensors of shape
`(batch_size, num_heads, sequence_length, embed_size_per_head)`) and 2 additional tensors of shape
`(batch_size, num_heads, encoder_sequence_length, embed_size_per_head)`.
Contains pre-computed hidden-states (key and values in the self-attention blocks and in the cross-attention
blocks) that can be used (see `past_key_values` input) to speed up sequential decoding.
decoder_hidden_states (`tuple(torch.FloatTensor)`, *optional*, returned when `output_hidden_states=True` is passed or when `config.output_hidden_states=True`):
Tuple of `torch.FloatTensor` (one for the output of the embeddings + one for the output of each layer) of
shape `(batch_size, sequence_length, hidden_size)`.
Hidden-states of the decoder at the output of each layer plus the initial embedding outputs.
decoder_attentions (`tuple(torch.FloatTensor)`, *optional*, returned when `output_attentions=True` is passed or when `config.output_attentions=True`):
Tuple of `torch.FloatTensor` (one for each layer) of shape `(batch_size, num_heads, sequence_length,
sequence_length)`.
Attentions weights of the decoder, after the attention softmax, used to compute the weighted average in the
self-attention heads.
cross_attentions (`tuple(torch.FloatTensor)`, *optional*, returned when `output_attentions=True` is passed or when `config.output_attentions=True`):
Tuple of `torch.FloatTensor` (one for each layer) of shape `(batch_size, num_heads, sequence_length,
sequence_length)`.
Attentions weights of the decoder's cross-attention layer, after the attention softmax, used to compute the
weighted average in the cross-attention heads.
encoder_last_hidden_state (`torch.FloatTensor` of shape `(batch_size, sequence_length, hidden_size)`, *optional*):
Sequence of hidden-states at the output of the last layer of the encoder of the model.
encoder_hidden_states (`tuple(torch.FloatTensor)`, *optional*, returned when `output_hidden_states=True` is passed or when `config.output_hidden_states=True`):
Tuple of `torch.FloatTensor` (one for the output of the embeddings + one for the output of each layer) of
shape `(batch_size, sequence_length, hidden_size)`.
Hidden-states of the encoder at the output of each layer plus the initial embedding outputs.
encoder_attentions (`tuple(torch.FloatTensor)`, *optional*, returned when `output_attentions=True` is passed or when `config.output_attentions=True`):
Tuple of `torch.FloatTensor` (one for each layer) of shape `(batch_size, num_heads, sequence_length,
sequence_length)`.
Attentions weights of the encoder, after the attention softmax, used to compute the weighted average in the
self-attention heads.
"""
loss: Optional[torch.FloatTensor] = None
start_logits: torch.FloatTensor = None
end_logits: torch.FloatTensor = None
past_key_values: Optional[Tuple[Tuple[torch.FloatTensor]]] = None
decoder_hidden_states: Optional[Tuple[torch.FloatTensor]] = None
decoder_attentions: Optional[Tuple[torch.FloatTensor]] = None
cross_attentions: Optional[Tuple[torch.FloatTensor]] = None
encoder_last_hidden_state: Optional[torch.FloatTensor] = None
encoder_hidden_states: Optional[Tuple[torch.FloatTensor]] = None
encoder_attentions: Optional[Tuple[torch.FloatTensor]] = None
@dataclass
class SemanticSegmentationModelOutput(ModelOutput):
"""
Base class for outputs of semantic segmentation models.
Args:
loss (`torch.FloatTensor` of shape `(1,)`, *optional*, returned when `labels` is provided):
Classification (or regression if config.num_labels==1) loss.
logits (`torch.FloatTensor` of shape `(batch_size, config.num_labels, logits_height, logits_width)`):
Classification scores for each pixel.
<Tip warning={true}>
The logits returned do not necessarily have the same size as the `pixel_values` passed as inputs. This is
to avoid doing two interpolations and lose some quality when a user needs to resize the logits to the
original image size as post-processing. You should always check your logits shape and resize as needed.
</Tip>
hidden_states (`tuple(torch.FloatTensor)`, *optional*, returned when `output_hidden_states=True` is passed or when `config.output_hidden_states=True`):
Tuple of `torch.FloatTensor` (one for the output of the embeddings + one for the output of each layer) of
shape `(batch_size, patch_size, hidden_size)`.
Hidden-states of the model at the output of each layer plus the initial embedding outputs.
attentions (`tuple(torch.FloatTensor)`, *optional*, returned when `output_attentions=True` is passed or when `config.output_attentions=True`):
Tuple of `torch.FloatTensor` (one for each layer) of shape `(batch_size, num_heads, patch_size,
sequence_length)`.
Attentions weights after the attention softmax, used to compute the weighted average in the self-attention
heads.
"""
loss: Optional[torch.FloatTensor] = None
logits: torch.FloatTensor = None
hidden_states: Optional[Tuple[torch.FloatTensor]] = None
attentions: Optional[Tuple[torch.FloatTensor]] = None
@dataclass
class ImageClassifierOutput(ModelOutput):
"""
Base class for outputs of image classification models.
Args:
loss (`torch.FloatTensor` of shape `(1,)`, *optional*, returned when `labels` is provided):
Classification (or regression if config.num_labels==1) loss.
logits (`torch.FloatTensor` of shape `(batch_size, config.num_labels)`):
Classification (or regression if config.num_labels==1) scores (before SoftMax).
hidden_states (`tuple(torch.FloatTensor)`, *optional*, returned when `output_hidden_states=True` is passed or when `config.output_hidden_states=True`):
Tuple of `torch.FloatTensor` (one for the output of the embeddings, if the model has an embedding layer, +
one for the output of each stage) of shape `(batch_size, sequence_length, hidden_size)`. Hidden-states
(also called feature maps) of the model at the output of each stage.
attentions (`tuple(torch.FloatTensor)`, *optional*, returned when `output_attentions=True` is passed or when `config.output_attentions=True`):
Tuple of `torch.FloatTensor` (one for each layer) of shape `(batch_size, num_heads, patch_size,
sequence_length)`.
Attentions weights after the attention softmax, used to compute the weighted average in the self-attention
heads.
"""
loss: Optional[torch.FloatTensor] = None
logits: torch.FloatTensor = None
hidden_states: Optional[Tuple[torch.FloatTensor]] = None
attentions: Optional[Tuple[torch.FloatTensor]] = None
@dataclass
class ImageClassifierOutputWithNoAttention(ModelOutput):
"""
Base class for outputs of image classification models.
Args:
loss (`torch.FloatTensor` of shape `(1,)`, *optional*, returned when `labels` is provided):
Classification (or regression if config.num_labels==1) loss.
logits (`torch.FloatTensor` of shape `(batch_size, config.num_labels)`):
Classification (or regression if config.num_labels==1) scores (before SoftMax).
hidden_states (`tuple(torch.FloatTensor)`, *optional*, returned when `output_hidden_states=True` is passed or when `config.output_hidden_states=True`):
Tuple of `torch.FloatTensor` (one for the output of the embeddings, if the model has an embedding layer, +
one for the output of each stage) of shape `(batch_size, num_channels, height, width)`. Hidden-states (also
called feature maps) of the model at the output of each stage.
"""
loss: Optional[torch.FloatTensor] = None
logits: torch.FloatTensor = None
hidden_states: Optional[Tuple[torch.FloatTensor]] = None | 57,639 | 60.647059 | 194 | py |
robust-transformers | robust-transformers-main/src/transformers/dependency_versions_table.py | # THIS FILE HAS BEEN AUTOGENERATED. To update:
# 1. modify the `_deps` dict in setup.py
# 2. run `make deps_table_update``
deps = {
"Pillow": "Pillow",
"black": "black~=22.0",
"codecarbon": "codecarbon==1.2.0",
"cookiecutter": "cookiecutter==1.7.2",
"dataclasses": "dataclasses",
"datasets": "datasets",
"deepspeed": "deepspeed>=0.5.9",
"fairscale": "fairscale>0.3",
"faiss-cpu": "faiss-cpu",
"fastapi": "fastapi",
"filelock": "filelock",
"flake8": "flake8>=3.8.3",
"flax": "flax>=0.3.5",
"ftfy": "ftfy",
"fugashi": "fugashi>=1.0",
"GitPython": "GitPython<3.1.19",
"huggingface-hub": "huggingface-hub>=0.1.0,<1.0",
"importlib_metadata": "importlib_metadata",
"ipadic": "ipadic>=1.0.0,<2.0",
"isort": "isort>=5.5.4",
"jax": "jax>=0.2.8",
"jaxlib": "jaxlib>=0.1.65",
"jieba": "jieba",
"nltk": "nltk",
"numpy": "numpy>=1.17",
"onnxconverter-common": "onnxconverter-common",
"onnxruntime-tools": "onnxruntime-tools>=1.4.2",
"onnxruntime": "onnxruntime>=1.4.0",
"optuna": "optuna",
"optax": "optax>=0.0.8",
"packaging": "packaging>=20.0",
"parameterized": "parameterized",
"phonemizer": "phonemizer",
"protobuf": "protobuf",
"psutil": "psutil",
"pyyaml": "pyyaml>=5.1",
"pydantic": "pydantic",
"pytest": "pytest",
"pytest-timeout": "pytest-timeout",
"pytest-xdist": "pytest-xdist",
"python": "python>=3.6.0",
"ray[tune]": "ray[tune]",
"regex": "regex!=2019.12.17",
"requests": "requests",
"rouge-score": "rouge-score",
"sacrebleu": "sacrebleu>=1.4.12,<2.0.0",
"sacremoses": "sacremoses",
"sagemaker": "sagemaker>=2.31.0",
"scikit-learn": "scikit-learn",
"sentencepiece": "sentencepiece>=0.1.91,!=0.1.92",
"sigopt": "sigopt",
"librosa": "librosa",
"starlette": "starlette",
"tensorflow-cpu": "tensorflow-cpu>=2.3",
"tensorflow": "tensorflow>=2.3",
"tf2onnx": "tf2onnx",
"timeout-decorator": "timeout-decorator",
"timm": "timm",
"tokenizers": "tokenizers>=0.11.1,!=0.11.3",
"torch": "torch>=1.0",
"torchaudio": "torchaudio",
"pyctcdecode": "pyctcdecode>=0.3.0",
"tqdm": "tqdm>=4.27",
"unidic": "unidic>=1.0.2",
"unidic_lite": "unidic_lite>=1.0.7",
"uvicorn": "uvicorn",
}
| 2,329 | 31.361111 | 54 | py |
robust-transformers | robust-transformers-main/src/transformers/image_utils.py | # coding=utf-8
# Copyright 2021 The HuggingFace Inc. team.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
import os
from typing import List, Union
import numpy as np
import PIL.Image
import PIL.ImageOps
import requests
from .file_utils import _is_torch, is_torch_available
IMAGENET_DEFAULT_MEAN = [0.485, 0.456, 0.406]
IMAGENET_DEFAULT_STD = [0.229, 0.224, 0.225]
IMAGENET_STANDARD_MEAN = [0.5, 0.5, 0.5]
IMAGENET_STANDARD_STD = [0.5, 0.5, 0.5]
ImageInput = Union[
PIL.Image.Image, np.ndarray, "torch.Tensor", List[PIL.Image.Image], List[np.ndarray], List["torch.Tensor"] # noqa
]
def is_torch_tensor(obj):
return _is_torch(obj) if is_torch_available() else False
def load_image(image: Union[str, "PIL.Image.Image"]) -> "PIL.Image.Image":
"""
Loads `image` to a PIL Image.
Args:
image (`str` or `PIL.Image.Image`):
The image to convert to the PIL Image format.
Returns:
`PIL.Image.Image`: A PIL Image.
"""
if isinstance(image, str):
if image.startswith("http://") or image.startswith("https://"):
# We need to actually check for a real protocol, otherwise it's impossible to use a local file
# like http_huggingface_co.png
image = PIL.Image.open(requests.get(image, stream=True).raw)
elif os.path.isfile(image):
image = PIL.Image.open(image)
else:
raise ValueError(
f"Incorrect path or url, URLs must start with `http://` or `https://`, and {image} is not a valid path"
)
elif isinstance(image, PIL.Image.Image):
image = image
else:
raise ValueError(
"Incorrect format used for image. Should be an url linking to an image, a local path, or a PIL image."
)
image = PIL.ImageOps.exif_transpose(image)
image = image.convert("RGB")
return image
# In the future we can add a TF implementation here when we have TF models.
class ImageFeatureExtractionMixin:
"""
Mixin that contain utilities for preparing image features.
"""
def _ensure_format_supported(self, image):
if not isinstance(image, (PIL.Image.Image, np.ndarray)) and not is_torch_tensor(image):
raise ValueError(
f"Got type {type(image)} which is not supported, only `PIL.Image.Image`, `np.array` and "
"`torch.Tensor` are."
)
def to_pil_image(self, image, rescale=None):
"""
Converts `image` to a PIL Image. Optionally rescales it and puts the channel dimension back as the last axis if
needed.
Args:
image (`PIL.Image.Image` or `numpy.ndarray` or `torch.Tensor`):
The image to convert to the PIL Image format.
rescale (`bool`, *optional*):
Whether or not to apply the scaling factor (to make pixel values integers between 0 and 255). Will
default to `True` if the image type is a floating type, `False` otherwise.
"""
self._ensure_format_supported(image)
if is_torch_tensor(image):
image = image.numpy()
if isinstance(image, np.ndarray):
if rescale is None:
# rescale default to the array being of floating type.
rescale = isinstance(image.flat[0], np.floating)
# If the channel as been moved to first dim, we put it back at the end.
if image.ndim == 3 and image.shape[0] in [1, 3]:
image = image.transpose(1, 2, 0)
if rescale:
image = image * 255
image = image.astype(np.uint8)
return PIL.Image.fromarray(image)
return image
def to_numpy_array(self, image, rescale=None, channel_first=True):
"""
Converts `image` to a numpy array. Optionally rescales it and puts the channel dimension as the first
dimension.
Args:
image (`PIL.Image.Image` or `np.ndarray` or `torch.Tensor`):
The image to convert to a NumPy array.
rescale (`bool`, *optional*):
Whether or not to apply the scaling factor (to make pixel values floats between 0. and 1.). Will
default to `True` if the image is a PIL Image or an array/tensor of integers, `False` otherwise.
channel_first (`bool`, *optional*, defaults to `True`):
Whether or not to permute the dimensions of the image to put the channel dimension first.
"""
self._ensure_format_supported(image)
if isinstance(image, PIL.Image.Image):
image = np.array(image)
if is_torch_tensor(image):
image = image.numpy()
if rescale is None:
rescale = isinstance(image.flat[0], np.integer)
if rescale:
image = image.astype(np.float32) / 255.0
if channel_first and image.ndim == 3:
image = image.transpose(2, 0, 1)
return image
def normalize(self, image, mean, std):
"""
Normalizes `image` with `mean` and `std`. Note that this will trigger a conversion of `image` to a NumPy array
if it's a PIL Image.
Args:
image (`PIL.Image.Image` or `np.ndarray` or `torch.Tensor`):
The image to normalize.
mean (`List[float]` or `np.ndarray` or `torch.Tensor`):
The mean (per channel) to use for normalization.
std (`List[float]` or `np.ndarray` or `torch.Tensor`):
The standard deviation (per channel) to use for normalization.
"""
self._ensure_format_supported(image)
if isinstance(image, PIL.Image.Image):
image = self.to_numpy_array(image)
if isinstance(image, np.ndarray):
if not isinstance(mean, np.ndarray):
mean = np.array(mean).astype(image.dtype)
if not isinstance(std, np.ndarray):
std = np.array(std).astype(image.dtype)
elif is_torch_tensor(image):
import torch
if not isinstance(mean, torch.Tensor):
mean = torch.tensor(mean)
if not isinstance(std, torch.Tensor):
std = torch.tensor(std)
if image.ndim == 3 and image.shape[0] in [1, 3]:
return (image - mean[:, None, None]) / std[:, None, None]
else:
return (image - mean) / std
def resize(self, image, size, resample=PIL.Image.BILINEAR, default_to_square=True, max_size=None):
"""
Resizes `image`. Note that this will trigger a conversion of `image` to a PIL Image.
Args:
image (`PIL.Image.Image` or `np.ndarray` or `torch.Tensor`):
The image to resize.
size (`int` or `Tuple[int, int]`):
The size to use for resizing the image. If `size` is a sequence like (h, w), output size will be
matched to this.
If `size` is an int and `default_to_square` is `True`, then image will be resized to (size, size). If
`size` is an int and `default_to_square` is `False`, then smaller edge of the image will be matched to
this number. i.e, if height > width, then image will be rescaled to (size * height / width, size).
resample (`int`, *optional*, defaults to `PIL.Image.BILINEAR`):
The filter to user for resampling.
default_to_square (`bool`, *optional*, defaults to `True`):
How to convert `size` when it is a single int. If set to `True`, the `size` will be converted to a
square (`size`,`size`). If set to `False`, will replicate
[`torchvision.transforms.Resize`](https://pytorch.org/vision/stable/transforms.html#torchvision.transforms.Resize)
with support for resizing only the smallest edge and providing an optional `max_size`.
max_size (`int`, *optional*, defaults to `None`):
The maximum allowed for the longer edge of the resized image: if the longer edge of the image is
greater than `max_size` after being resized according to `size`, then the image is resized again so
that the longer edge is equal to `max_size`. As a result, `size` might be overruled, i.e the smaller
edge may be shorter than `size`. Only used if `default_to_square` is `False`.
"""
self._ensure_format_supported(image)
if not isinstance(image, PIL.Image.Image):
image = self.to_pil_image(image)
if isinstance(size, list):
size = tuple(size)
if isinstance(size, int) or len(size) == 1:
if default_to_square:
size = (size, size) if isinstance(size, int) else (size[0], size[0])
else:
width, height = image.size
# specified size only for the smallest edge
short, long = (width, height) if width <= height else (height, width)
requested_new_short = size if isinstance(size, int) else size[0]
if short == requested_new_short:
return image
new_short, new_long = requested_new_short, int(requested_new_short * long / short)
if max_size is not None:
if max_size <= requested_new_short:
raise ValueError(
f"max_size = {max_size} must be strictly greater than the requested "
f"size for the smaller edge size = {size}"
)
if new_long > max_size:
new_short, new_long = int(max_size * new_short / new_long), max_size
size = (new_short, new_long) if width <= height else (new_long, new_short)
return image.resize(size, resample=resample)
def center_crop(self, image, size):
"""
Crops `image` to the given size using a center crop. Note that if the image is too small to be cropped to the
size given, it will be padded (so the returned result has the size asked).
Args:
image (`PIL.Image.Image` or `np.ndarray` or `torch.Tensor`):
The image to resize.
size (`int` or `Tuple[int, int]`):
The size to which crop the image.
"""
self._ensure_format_supported(image)
if not isinstance(size, tuple):
size = (size, size)
# PIL Image.size is (width, height) but NumPy array and torch Tensors have (height, width)
image_shape = (image.size[1], image.size[0]) if isinstance(image, PIL.Image.Image) else image.shape[-2:]
top = (image_shape[0] - size[0]) // 2
bottom = top + size[0] # In case size is odd, (image_shape[0] + size[0]) // 2 won't give the proper result.
left = (image_shape[1] - size[1]) // 2
right = left + size[1] # In case size is odd, (image_shape[1] + size[1]) // 2 won't give the proper result.
# For PIL Images we have a method to crop directly.
if isinstance(image, PIL.Image.Image):
return image.crop((left, top, right, bottom))
# Check if all the dimensions are inside the image.
if top >= 0 and bottom <= image_shape[0] and left >= 0 and right <= image_shape[1]:
return image[..., top:bottom, left:right]
# Otherwise, we may need to pad if the image is too small. Oh joy...
new_shape = image.shape[:-2] + (max(size[0], image_shape[0]), max(size[1], image_shape[1]))
if isinstance(image, np.ndarray):
new_image = np.zeros_like(image, shape=new_shape)
elif is_torch_tensor(image):
new_image = image.new_zeros(new_shape)
top_pad = (new_shape[-2] - image_shape[0]) // 2
bottom_pad = top_pad + image_shape[0]
left_pad = (new_shape[-1] - image_shape[1]) // 2
right_pad = left_pad + image_shape[1]
new_image[..., top_pad:bottom_pad, left_pad:right_pad] = image
top += top_pad
bottom += top_pad
left += left_pad
right += left_pad
return new_image[
..., max(0, top) : min(new_image.shape[-2], bottom), max(0, left) : min(new_image.shape[-1], right)
]
| 12,839 | 41.8 | 130 | py |
robust-transformers | robust-transformers-main/src/transformers/modeling_utils.py | # coding=utf-8
# Copyright 2018 The Google AI Language Team Authors, Facebook AI Research authors and The HuggingFace Inc. team.
# Copyright (c) 2018, NVIDIA CORPORATION. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
import inspect
import os
import re
from contextlib import contextmanager
from dataclasses import dataclass
from functools import partial
from typing import Any, Callable, Dict, List, Optional, Set, Tuple, Union
import torch
from torch import Tensor, device, nn
from torch.nn import CrossEntropyLoss
from requests import HTTPError
from .activations import get_activation
from .configuration_utils import PretrainedConfig
from .deepspeed import deepspeed_config, is_deepspeed_zero3_enabled
from .dynamic_module_utils import custom_object_save
from .file_utils import (
DUMMY_INPUTS,
FLAX_WEIGHTS_NAME,
TF2_WEIGHTS_NAME,
TF_WEIGHTS_NAME,
WEIGHTS_NAME,
EntryNotFoundError,
ModelOutput,
PushToHubMixin,
RepositoryNotFoundError,
RevisionNotFoundError,
cached_path,
copy_func,
has_file,
hf_bucket_url,
is_offline_mode,
is_remote_url,
replace_return_docstrings,
)
from .generation_utils import GenerationMixin
from .utils import logging
from .utils.versions import require_version_core
logger = logging.get_logger(__name__)
_init_weights = True
@contextmanager
def no_init_weights(_enable=True):
"""
Context manager to globally disable weight initialization to speed up loading large models.
TODO(Patrick): Delete safety argument `_enable=True` at next major version. .
"""
global _init_weights
if _enable:
_init_weights = False
try:
yield
finally:
_init_weights = True
try:
from torch.nn import Identity
except ImportError:
# Older PyTorch compatibility
class Identity(nn.Module):
r"""A placeholder identity operator that is argument-insensitive."""
def __init__(self, *args, **kwargs):
super().__init__()
def forward(self, input):
return input
def find_pruneable_heads_and_indices(
heads: List[int], n_heads: int, head_size: int, already_pruned_heads: Set[int]
) -> Tuple[Set[int], torch.LongTensor]:
"""
Finds the heads and their indices taking `already_pruned_heads` into account.
Args:
heads (`List[int]`): List of the indices of heads to prune.
n_heads (`int`): The number of heads in the model.
head_size (`int`): The size of each head.
already_pruned_heads (`Set[int]`): A set of already pruned heads.
Returns:
`Tuple[Set[int], torch.LongTensor]`: A tuple with the remaining heads and their corresponding indices.
"""
mask = torch.ones(n_heads, head_size)
heads = set(heads) - already_pruned_heads # Convert to set and remove already pruned heads
for head in heads:
# Compute how many pruned heads are before the head and move the index accordingly
head = head - sum(1 if h < head else 0 for h in already_pruned_heads)
mask[head] = 0
mask = mask.view(-1).contiguous().eq(1)
index: torch.LongTensor = torch.arange(len(mask))[mask].long()
return heads, index
def get_parameter_device(parameter: Union[nn.Module, GenerationMixin, "ModuleUtilsMixin"]):
try:
return next(parameter.parameters()).device
except StopIteration:
# For nn.DataParallel compatibility in PyTorch 1.5
def find_tensor_attributes(module: nn.Module) -> List[Tuple[str, Tensor]]:
tuples = [(k, v) for k, v in module.__dict__.items() if torch.is_tensor(v)]
return tuples
gen = parameter._named_members(get_members_fn=find_tensor_attributes)
first_tuple = next(gen)
return first_tuple[1].device
def get_parameter_dtype(parameter: Union[nn.Module, GenerationMixin, "ModuleUtilsMixin"]):
try:
return next(parameter.parameters()).dtype
except StopIteration:
# For nn.DataParallel compatibility in PyTorch 1.5
def find_tensor_attributes(module: nn.Module) -> List[Tuple[str, Tensor]]:
tuples = [(k, v) for k, v in module.__dict__.items() if torch.is_tensor(v)]
return tuples
gen = parameter._named_members(get_members_fn=find_tensor_attributes)
first_tuple = next(gen)
return first_tuple[1].dtype
class ModuleUtilsMixin:
"""
A few utilities for `torch.nn.Modules`, to be used as a mixin.
"""
@staticmethod
def _hook_rss_memory_pre_forward(module, *args, **kwargs):
try:
import psutil
except (ImportError):
raise ImportError("You need to install psutil (pip install psutil) to use memory tracing.")
process = psutil.Process(os.getpid())
mem = process.memory_info()
module.mem_rss_pre_forward = mem.rss
return None
@staticmethod
def _hook_rss_memory_post_forward(module, *args, **kwargs):
try:
import psutil
except (ImportError):
raise ImportError("You need to install psutil (pip install psutil) to use memory tracing.")
process = psutil.Process(os.getpid())
mem = process.memory_info()
module.mem_rss_post_forward = mem.rss
mem_rss_diff = module.mem_rss_post_forward - module.mem_rss_pre_forward
module.mem_rss_diff = mem_rss_diff + (module.mem_rss_diff if hasattr(module, "mem_rss_diff") else 0)
return None
def add_memory_hooks(self):
"""
Add a memory hook before and after each sub-module forward pass to record increase in memory consumption.
Increase in memory consumption is stored in a `mem_rss_diff` attribute for each module and can be reset to zero
with `model.reset_memory_hooks_state()`.
"""
for module in self.modules():
module.register_forward_pre_hook(self._hook_rss_memory_pre_forward)
module.register_forward_hook(self._hook_rss_memory_post_forward)
self.reset_memory_hooks_state()
def reset_memory_hooks_state(self):
"""
Reset the `mem_rss_diff` attribute of each module (see [`~modeling_utils.ModuleUtilsMixin.add_memory_hooks`]).
"""
for module in self.modules():
module.mem_rss_diff = 0
module.mem_rss_post_forward = 0
module.mem_rss_pre_forward = 0
@property
def device(self) -> device:
"""
`torch.device`: The device on which the module is (assuming that all the module parameters are on the same
device).
"""
return get_parameter_device(self)
@property
def dtype(self) -> torch.dtype:
"""
`torch.dtype`: The dtype of the module (assuming that all the module parameters have the same dtype).
"""
return get_parameter_dtype(self)
def invert_attention_mask(self, encoder_attention_mask: Tensor) -> Tensor:
"""
Invert an attention mask (e.g., switches 0. and 1.).
Args:
encoder_attention_mask (`torch.Tensor`): An attention mask.
Returns:
`torch.Tensor`: The inverted attention mask.
"""
if encoder_attention_mask.dim() == 3:
encoder_extended_attention_mask = encoder_attention_mask[:, None, :, :]
if encoder_attention_mask.dim() == 2:
encoder_extended_attention_mask = encoder_attention_mask[:, None, None, :]
# T5 has a mask that can compare sequence ids, we can simulate this here with this transposition
# Cf. https://github.com/tensorflow/mesh/blob/8d2465e9bc93129b913b5ccc6a59aa97abd96ec6/mesh_tensorflow
# /transformer/transformer_layers.py#L270
# encoder_extended_attention_mask = (encoder_extended_attention_mask ==
# encoder_extended_attention_mask.transpose(-1, -2))
encoder_extended_attention_mask = encoder_extended_attention_mask.to(dtype=self.dtype) # fp16 compatibility
if self.dtype == torch.float16:
encoder_extended_attention_mask = (1.0 - encoder_extended_attention_mask) * -1e4
elif self.dtype in [torch.bfloat16, torch.float32]:
encoder_extended_attention_mask = (1.0 - encoder_extended_attention_mask) * -1e9
else:
raise ValueError(
f"{self.dtype} not recognized. `dtype` should be set to either `torch.float32` or `torch.float16`"
)
return encoder_extended_attention_mask
def create_extended_attention_mask_for_decoder(self, input_shape, attention_mask, device):
batch_size, seq_length = input_shape
seq_ids = torch.arange(seq_length, device=device)
causal_mask = seq_ids[None, None, :].repeat(batch_size, seq_length, 1) <= seq_ids[None, :, None]
# in case past_key_values are used we need to add a prefix ones mask to the causal mask
# causal and attention masks must have same type with pytorch version < 1.3
causal_mask = causal_mask.to(attention_mask.dtype)
if causal_mask.shape[1] < attention_mask.shape[1]:
prefix_seq_len = attention_mask.shape[1] - causal_mask.shape[1]
causal_mask = torch.cat(
[
torch.ones((batch_size, seq_length, prefix_seq_len), device=device, dtype=causal_mask.dtype),
causal_mask,
],
axis=-1,
)
extended_attention_mask = causal_mask[:, None, :, :] * attention_mask[:, None, None, :]
return extended_attention_mask
def get_extended_attention_mask(self, attention_mask: Tensor, input_shape: Tuple[int], device: device) -> Tensor:
"""
Makes broadcastable attention and causal masks so that future and masked tokens are ignored.
Arguments:
attention_mask (`torch.Tensor`):
Mask with ones indicating tokens to attend to, zeros for tokens to ignore.
input_shape (`Tuple[int]`):
The shape of the input to the model.
device: (`torch.device`):
The device of the input to the model.
Returns:
`torch.Tensor` The extended attention mask, with a the same dtype as `attention_mask.dtype`.
"""
# We can provide a self-attention mask of dimensions [batch_size, from_seq_length, to_seq_length]
# ourselves in which case we just need to make it broadcastable to all heads.
if attention_mask.dim() == 3:
extended_attention_mask = attention_mask[:, None, :, :]
elif attention_mask.dim() == 2:
# Provided a padding mask of dimensions [batch_size, seq_length]
# - if the model is a decoder, apply a causal mask in addition to the padding mask
# - if the model is an encoder, make the mask broadcastable to [batch_size, num_heads, seq_length, seq_length]
if self.config.is_decoder:
extended_attention_mask = self.create_extended_attention_mask_for_decoder(
input_shape, attention_mask, device
)
else:
extended_attention_mask = attention_mask[:, None, None, :]
else:
raise ValueError(
f"Wrong shape for input_ids (shape {input_shape}) or attention_mask (shape {attention_mask.shape})"
)
# Since attention_mask is 1.0 for positions we want to attend and 0.0 for
# masked positions, this operation will create a tensor which is 0.0 for
# positions we want to attend and -10000.0 for masked positions.
# Since we are adding it to the raw scores before the softmax, this is
# effectively the same as removing these entirely.
extended_attention_mask = extended_attention_mask.to(dtype=self.dtype) # fp16 compatibility
extended_attention_mask = (1.0 - extended_attention_mask) * -10000.0
return extended_attention_mask
def get_head_mask(
self, head_mask: Optional[Tensor], num_hidden_layers: int, is_attention_chunked: bool = False
) -> Tensor:
"""
Prepare the head mask if needed.
Args:
head_mask (`torch.Tensor` with shape `[num_heads]` or `[num_hidden_layers x num_heads]`, *optional*):
The mask indicating if we should keep the heads or not (1.0 for keep, 0.0 for discard).
num_hidden_layers (`int`):
The number of hidden layers in the model.
is_attention_chunked: (`bool`, *optional*, defaults to `False`):
Whether or not the attentions scores are computed by chunks or not.
Returns:
`torch.Tensor` with shape `[num_hidden_layers x batch x num_heads x seq_length x seq_length]` or list with
`[None]` for each layer.
"""
if head_mask is not None:
head_mask = self._convert_head_mask_to_5d(head_mask, num_hidden_layers)
if is_attention_chunked is True:
head_mask = head_mask.unsqueeze(-1)
else:
head_mask = [None] * num_hidden_layers
return head_mask
def _convert_head_mask_to_5d(self, head_mask, num_hidden_layers):
"""-> [num_hidden_layers x batch x num_heads x seq_length x seq_length]"""
if head_mask.dim() == 1:
head_mask = head_mask.unsqueeze(0).unsqueeze(0).unsqueeze(-1).unsqueeze(-1)
head_mask = head_mask.expand(num_hidden_layers, -1, -1, -1, -1)
elif head_mask.dim() == 2:
head_mask = head_mask.unsqueeze(1).unsqueeze(-1).unsqueeze(-1) # We can specify head_mask for each layer
assert head_mask.dim() == 5, f"head_mask.dim != 5, instead {head_mask.dim()}"
head_mask = head_mask.to(dtype=self.dtype) # switch to float if need + fp16 compatibility
return head_mask
def num_parameters(self, only_trainable: bool = False, exclude_embeddings: bool = False) -> int:
"""
Get number of (optionally, trainable or non-embeddings) parameters in the module.
Args:
only_trainable (`bool`, *optional*, defaults to `False`):
Whether or not to return only the number of trainable parameters
exclude_embeddings (`bool`, *optional*, defaults to `False`):
Whether or not to return only the number of non-embeddings parameters
Returns:
`int`: The number of parameters.
"""
if exclude_embeddings:
embedding_param_names = [
f"{name}.weight" for name, module_type in self.named_modules() if isinstance(module_type, nn.Embedding)
]
non_embedding_parameters = [
parameter for name, parameter in self.named_parameters() if name not in embedding_param_names
]
return sum(p.numel() for p in non_embedding_parameters if p.requires_grad or not only_trainable)
else:
return sum(p.numel() for p in self.parameters() if p.requires_grad or not only_trainable)
def estimate_tokens(self, input_dict: Dict[str, Union[torch.Tensor, Any]]) -> int:
"""
Helper function to estimate the total number of tokens from the model inputs.
Args:
inputs (`dict`): The model inputs.
Returns:
`int`: The total number of tokens.
"""
if self.main_input_name in input_dict:
return input_dict[self.main_input_name].numel()
else:
logger.warning(
"Could not estimate the number of tokens of the input, floating-point operations will not be computed"
)
return 0
def floating_point_ops(
self, input_dict: Dict[str, Union[torch.Tensor, Any]], exclude_embeddings: bool = True
) -> int:
"""
Get number of (optionally, non-embeddings) floating-point operations for the forward and backward passes of a
batch with this transformer model. Default approximation neglects the quadratic dependency on the number of
tokens (valid if `12 * d_model << sequence_length`) as laid out in [this
paper](https://arxiv.org/pdf/2001.08361.pdf) section 2.1. Should be overridden for transformers with parameter
re-use e.g. Albert or Universal Transformers, or if doing long-range modeling with very high sequence lengths.
Args:
batch_size (`int`):
The batch size for the forward pass.
sequence_length (`int`):
The number of tokens in each line of the batch.
exclude_embeddings (`bool`, *optional*, defaults to `True`):
Whether or not to count embedding and softmax operations.
Returns:
`int`: The number of floating-point operations.
"""
return 6 * self.estimate_tokens(input_dict) * self.num_parameters(exclude_embeddings=exclude_embeddings)
class PreTrainedModel(nn.Module, ModuleUtilsMixin, GenerationMixin, PushToHubMixin):
r"""
Base class for all models.
[`PreTrainedModel`] takes care of storing the configuration of the models and handles methods for loading,
downloading and saving models as well as a few methods common to all models to:
- resize the input embeddings,
- prune heads in the self-attention heads.
Class attributes (overridden by derived classes):
- **config_class** ([`PretrainedConfig`]) -- A subclass of [`PretrainedConfig`] to use as configuration class
for this model architecture.
- **load_tf_weights** (`Callable`) -- A python *method* for loading a TensorFlow checkpoint in a PyTorch model,
taking as arguments:
- **model** ([`PreTrainedModel`]) -- An instance of the model on which to load the TensorFlow checkpoint.
- **config** ([`PreTrainedConfig`]) -- An instance of the configuration associated to the model.
- **path** (`str`) -- A path to the TensorFlow checkpoint.
- **base_model_prefix** (`str`) -- A string indicating the attribute associated to the base model in derived
classes of the same architecture adding modules on top of the base model.
- **is_parallelizable** (`bool`) -- A flag indicating whether this model supports model parallelization.
- **main_input_name** (`str`) -- The name of the principal input to the model (often `input_ids` for NLP
models, `pixel_values` for vision models and `input_values` for speech models).
"""
config_class = None
base_model_prefix = ""
main_input_name = "input_ids"
_auto_class = None
# a list of re pattern of tensor names to ignore from the model when loading the model weights
# (and avoid unnecessary warnings).
_keys_to_ignore_on_load_missing = None
# a list of re pattern of tensor names to ignore from the weights when loading the model weights
# (and avoid unnecessary warnings).
_keys_to_ignore_on_load_unexpected = None
# a list of of tensor names to ignore when saving the model (useful for keys that aren't
# trained, but which are deterministic, or tied variables)
_keys_to_ignore_on_save = None
is_parallelizable = False
supports_gradient_checkpointing = False
@property
def dummy_inputs(self) -> Dict[str, torch.Tensor]:
"""
`Dict[str, torch.Tensor]`: Dummy inputs to do a forward pass in the network.
"""
return {"input_ids": torch.tensor(DUMMY_INPUTS)}
@property
def framework(self) -> str:
"""
:str: Identifies that this is a PyTorch model.
"""
return "pt"
def __init__(self, config: PretrainedConfig, *inputs, **kwargs):
super().__init__()
if not isinstance(config, PretrainedConfig):
raise ValueError(
f"Parameter config in `{self.__class__.__name__}(config)` should be an instance of class "
"`PretrainedConfig`. To create a model from a pretrained model use "
f"`model = {self.__class__.__name__}.from_pretrained(PRETRAINED_MODEL_NAME)`"
)
# Save config and origin of the pretrained weights if given in model
self.config = config
self.name_or_path = config.name_or_path
def post_init(self):
"""
A method executed at the end of each Transformer model initialization, to execute code that needs the model's
modules properly initialized (such as weight initialization).
"""
self.init_weights()
self._backward_compatibility_gradient_checkpointing()
def _backward_compatibility_gradient_checkpointing(self):
if self.supports_gradient_checkpointing and getattr(self.config, "gradient_checkpointing", False):
self.gradient_checkpointing_enable()
# Remove the attribute now that is has been consumed, so it's no saved in the config.
delattr(self.config, "gradient_checkpointing")
@classmethod
def _from_config(cls, config, **kwargs):
"""
All context managers that the model should be initialized under go here.
Args:
torch_dtype (`torch.dtype`, *optional*):
Override the default `torch.dtype` and load the model under this dtype.
"""
torch_dtype = kwargs.pop("torch_dtype", None)
# override default dtype if needed
dtype_orig = None
if torch_dtype is not None:
dtype_orig = cls._set_default_torch_dtype(torch_dtype)
if is_deepspeed_zero3_enabled():
import deepspeed
logger.info("Detected DeepSpeed ZeRO-3: activating zero.init() for this model")
# this immediately partitions the model across all gpus, to avoid the overhead in time
# and memory copying it on CPU or each GPU first
with deepspeed.zero.Init(config_dict_or_path=deepspeed_config()):
model = cls(config, **kwargs)
else:
model = cls(config, **kwargs)
# restore default dtype if it was modified
if dtype_orig is not None:
torch.set_default_dtype(dtype_orig)
return model
@classmethod
def _set_default_torch_dtype(cls, dtype: torch.dtype) -> torch.dtype:
"""
Change the default dtype and return the previous one. This is needed when wanting to instantiate the model
under specific dtype.
Args:
dtype (`torch.dtype`):
a floating dtype to set to.
Returns:
`torch.dtype`: the original `dtype` that can be used to restore `torch.set_default_dtype(dtype)` if it was
modified. If it wasn't, returns `None`.
Note `set_default_dtype` currently only works with floating-point types and asserts if for example,
`torch.int64` is passed. So if a non-float `dtype` is passed this functions will throw an exception.
"""
if not dtype.is_floating_point:
raise ValueError(
f"Can't instantiate {cls.__name__} model under dtype={dtype} since it is not a floating point dtype"
)
logger.info(f"Instantiating {cls.__name__} model under default dtype {dtype}.")
dtype_orig = torch.get_default_dtype()
torch.set_default_dtype(dtype)
return dtype_orig
@property
def base_model(self) -> nn.Module:
"""
`torch.nn.Module`: The main body of the model.
"""
return getattr(self, self.base_model_prefix, self)
def get_input_embeddings(self) -> nn.Module:
"""
Returns the model's input embeddings.
Returns:
`nn.Module`: A torch module mapping vocabulary to hidden states.
"""
base_model = getattr(self, self.base_model_prefix, self)
if base_model is not self:
return base_model.get_input_embeddings()
else:
raise NotImplementedError
def set_input_embeddings(self, value: nn.Module):
"""
Set model's input embeddings.
Args:
value (`nn.Module`): A module mapping vocabulary to hidden states.
"""
base_model = getattr(self, self.base_model_prefix, self)
if base_model is not self:
base_model.set_input_embeddings(value)
else:
raise NotImplementedError
def get_output_embeddings(self) -> nn.Module:
"""
Returns the model's output embeddings.
Returns:
`nn.Module`: A torch module mapping hidden states to vocabulary.
"""
return None # Overwrite for models with output embeddings
def _init_weights(self, module):
"""
Initialize the weights. This method should be overridden by derived class.
"""
raise NotImplementedError(f"Make sure `_init_weights` is implemented for {self.__class__}")
def tie_weights(self):
"""
Tie the weights between the input embeddings and the output embeddings.
If the `torchscript` flag is set in the configuration, can't handle parameter sharing so we are cloning the
weights instead.
"""
output_embeddings = self.get_output_embeddings()
if output_embeddings is not None and getattr(self.config, "tie_word_embeddings", True):
self._tie_or_clone_weights(output_embeddings, self.get_input_embeddings())
if getattr(self.config, "is_encoder_decoder", False) and getattr(self.config, "tie_encoder_decoder", False):
if hasattr(self, self.base_model_prefix):
self = getattr(self, self.base_model_prefix)
self._tie_encoder_decoder_weights(self.encoder, self.decoder, self.base_model_prefix)
for module in self.modules():
if hasattr(module, "_tie_weights"):
module._tie_weights()
@staticmethod
def _tie_encoder_decoder_weights(encoder: nn.Module, decoder: nn.Module, base_model_prefix: str):
uninitialized_encoder_weights: List[str] = []
if decoder.__class__ != encoder.__class__:
logger.info(
f"{decoder.__class__} and {encoder.__class__} are not equal. In this case make sure that all encoder weights are correctly initialized."
)
def tie_encoder_to_decoder_recursively(
decoder_pointer: nn.Module,
encoder_pointer: nn.Module,
module_name: str,
uninitialized_encoder_weights: List[str],
depth=0,
):
assert isinstance(decoder_pointer, nn.Module) and isinstance(
encoder_pointer, nn.Module
), f"{decoder_pointer} and {encoder_pointer} have to be of type nn.Module"
if hasattr(decoder_pointer, "weight"):
assert hasattr(encoder_pointer, "weight")
encoder_pointer.weight = decoder_pointer.weight
if hasattr(decoder_pointer, "bias"):
assert hasattr(encoder_pointer, "bias")
encoder_pointer.bias = decoder_pointer.bias
return
encoder_modules = encoder_pointer._modules
decoder_modules = decoder_pointer._modules
if len(decoder_modules) > 0:
assert (
len(encoder_modules) > 0
), f"Encoder module {encoder_pointer} does not match decoder module {decoder_pointer}"
all_encoder_weights = set([module_name + "/" + sub_name for sub_name in encoder_modules.keys()])
encoder_layer_pos = 0
for name, module in decoder_modules.items():
if name.isdigit():
encoder_name = str(int(name) + encoder_layer_pos)
decoder_name = name
if not isinstance(decoder_modules[decoder_name], type(encoder_modules[encoder_name])) and len(
encoder_modules
) != len(decoder_modules):
# this can happen if the name corresponds to the position in a list module list of layers
# in this case the decoder has added a cross-attention that the encoder does not have
# thus skip this step and subtract one layer pos from encoder
encoder_layer_pos -= 1
continue
elif name not in encoder_modules:
continue
elif depth > 500:
raise ValueError(
"Max depth of recursive function `tie_encoder_to_decoder` reached. It seems that there is a circular dependency between two or more `nn.Modules` of your model."
)
else:
decoder_name = encoder_name = name
tie_encoder_to_decoder_recursively(
decoder_modules[decoder_name],
encoder_modules[encoder_name],
module_name + "/" + name,
uninitialized_encoder_weights,
depth=depth + 1,
)
all_encoder_weights.remove(module_name + "/" + encoder_name)
uninitialized_encoder_weights += list(all_encoder_weights)
# tie weights recursively
tie_encoder_to_decoder_recursively(decoder, encoder, base_model_prefix, uninitialized_encoder_weights)
if len(uninitialized_encoder_weights) > 0:
logger.warning(
f"The following encoder weights were not tied to the decoder {uninitialized_encoder_weights}"
)
def _tie_or_clone_weights(self, output_embeddings, input_embeddings):
"""Tie or clone module weights depending of whether we are using TorchScript or not"""
if self.config.torchscript:
output_embeddings.weight = nn.Parameter(input_embeddings.weight.clone())
else:
output_embeddings.weight = input_embeddings.weight
if getattr(output_embeddings, "bias", None) is not None:
output_embeddings.bias.data = nn.functional.pad(
output_embeddings.bias.data,
(
0,
output_embeddings.weight.shape[0] - output_embeddings.bias.shape[0],
),
"constant",
0,
)
if hasattr(output_embeddings, "out_features") and hasattr(input_embeddings, "num_embeddings"):
output_embeddings.out_features = input_embeddings.num_embeddings
def resize_token_embeddings(self, new_num_tokens: Optional[int] = None) -> nn.Embedding:
"""
Resizes input token embeddings matrix of the model if `new_num_tokens != config.vocab_size`.
Takes care of tying weights embeddings afterwards if the model class has a `tie_weights()` method.
Arguments:
new_num_tokens (`int`, *optional*):
The number of new tokens in the embedding matrix. Increasing the size will add newly initialized
vectors at the end. Reducing the size will remove vectors from the end. If not provided or `None`, just
returns a pointer to the input tokens `torch.nn.Embedding` module of the model without doing anything.
Return:
`torch.nn.Embedding`: Pointer to the input tokens Embeddings Module of the model.
"""
model_embeds = self._resize_token_embeddings(new_num_tokens)
if new_num_tokens is None:
return model_embeds
# Update base model and current model config
self.config.vocab_size = new_num_tokens
self.vocab_size = new_num_tokens
# Tie weights again if needed
self.tie_weights()
return model_embeds
def _resize_token_embeddings(self, new_num_tokens):
old_embeddings = self.get_input_embeddings()
new_embeddings = self._get_resized_embeddings(old_embeddings, new_num_tokens)
self.set_input_embeddings(new_embeddings)
# if word embeddings are not tied, make sure that lm head is resized as well
if self.get_output_embeddings() is not None and not self.config.tie_word_embeddings:
old_lm_head = self.get_output_embeddings()
new_lm_head = self._get_resized_lm_head(old_lm_head, new_num_tokens)
self.set_output_embeddings(new_lm_head)
return self.get_input_embeddings()
def _get_resized_embeddings(
self, old_embeddings: nn.Embedding, new_num_tokens: Optional[int] = None
) -> nn.Embedding:
"""
Build a resized Embedding Module from a provided token Embedding Module. Increasing the size will add newly
initialized vectors at the end. Reducing the size will remove vectors from the end
Args:
old_embeddings (`torch.nn.Embedding`):
Old embeddings to be resized.
new_num_tokens (`int`, *optional*):
New number of tokens in the embedding matrix.
Increasing the size will add newly initialized vectors at the end. Reducing the size will remove
vectors from the end. If not provided or `None`, just returns a pointer to the input tokens
``torch.nn.Embedding``` module of the model without doing anything.
Return:
`torch.nn.Embedding`: Pointer to the resized Embedding Module or the old Embedding Module if
`new_num_tokens` is `None`
"""
if new_num_tokens is None:
return old_embeddings
if is_deepspeed_zero3_enabled():
import deepspeed
with deepspeed.zero.GatheredParameters(old_embeddings.weight, modifier_rank=None):
old_num_tokens, old_embedding_dim = old_embeddings.weight.size()
else:
old_num_tokens, old_embedding_dim = old_embeddings.weight.size()
if old_num_tokens == new_num_tokens:
return old_embeddings
if not isinstance(old_embeddings, nn.Embedding):
raise TypeError(
f"Old embeddings are of type {type(old_embeddings)}, which is not an instance of {nn.Embedding}. "
f"You should either use a different resize function or make sure that `old_embeddings` are an instance of {nn.Embedding}."
)
# Build new embeddings
new_embeddings = nn.Embedding(new_num_tokens, old_embedding_dim)
new_embeddings.to(self.device, dtype=old_embeddings.weight.dtype)
# initialize all new embeddings (in particular added tokens)
self._init_weights(new_embeddings)
# Copy token embeddings from the previous weights
# numbers of tokens to copy
n = min(old_num_tokens, new_num_tokens)
if is_deepspeed_zero3_enabled():
import deepspeed
with deepspeed.zero.GatheredParameters(old_embeddings.weight, modifier_rank=0):
if torch.distributed.get_rank() == 0:
new_embeddings.weight.data[:n, :] = old_embeddings.weight.data[:n, :]
else:
new_embeddings.weight.data[:n, :] = old_embeddings.weight.data[:n, :]
return new_embeddings
def _get_resized_lm_head(
self, old_lm_head: nn.Linear, new_num_tokens: Optional[int] = None, transposed: Optional[bool] = False
) -> nn.Linear:
"""
Build a resized Linear Module from a provided old Linear Module. Increasing the size will add newly initialized
vectors at the end. Reducing the size will remove vectors from the end
Args:
old_lm_head (`torch.nn.Linear`):
Old lm head liner layer to be resized.
new_num_tokens (`int`, *optional*):
New number of tokens in the linear matrix.
Increasing the size will add newly initialized vectors at the end. Reducing the size will remove
vectors from the end. If not provided or `None`, just returns a pointer to the input tokens
``torch.nn.Linear``` module of the model without doing anything. transposed (`bool`, *optional*,
defaults to `False`): Whether `old_lm_head` is transposed or not. If True `old_lm_head.size()` is
`lm_head_dim, vocab_size` else `vocab_size, lm_head_dim`.
Return:
`torch.nn.Linear`: Pointer to the resized Linear Module or the old Linear Module if `new_num_tokens` is
`None`
"""
if new_num_tokens is None:
return old_lm_head
if is_deepspeed_zero3_enabled():
import deepspeed
with deepspeed.zero.GatheredParameters(old_lm_head.weight, modifier_rank=None):
old_num_tokens, old_lm_head_dim = (
old_lm_head.weight.size() if not transposed else old_lm_head.weight.t().size()
)
else:
old_num_tokens, old_lm_head_dim = (
old_lm_head.weight.size() if not transposed else old_lm_head.weight.t().size()
)
if old_num_tokens == new_num_tokens:
return old_lm_head
if not isinstance(old_lm_head, nn.Linear):
raise TypeError(
f"Old language model head is of type {type(old_lm_head)}, which is not an instance of {nn.Linear}. "
f"You should either use a different resize function or make sure that `old_lm_head` are an instance of {nn.Linear}."
)
# Build new lm head
new_lm_head_shape = (old_lm_head_dim, new_num_tokens) if not transposed else (new_num_tokens, old_lm_head_dim)
has_new_lm_head_bias = old_lm_head.bias is not None
new_lm_head = nn.Linear(*new_lm_head_shape, bias=has_new_lm_head_bias)
new_lm_head = new_lm_head.to(self.device, dtype=old_lm_head.weight.dtype)
# initialize new lm head (in particular added tokens)
self._init_weights(new_lm_head)
num_tokens_to_copy = min(old_num_tokens, new_num_tokens)
# XXX: put the long block of code in a wrapper
if is_deepspeed_zero3_enabled():
import deepspeed
with deepspeed.zero.GatheredParameters(old_lm_head.weight, modifier_rank=0):
if torch.distributed.get_rank() == 0:
# Copy old lm head weights to new lm head
if not transposed:
new_lm_head.weight.data[:num_tokens_to_copy, :] = old_lm_head.weight.data[
:num_tokens_to_copy, :
]
else:
new_lm_head.weight.data[:, :num_tokens_to_copy] = old_lm_head.weight.data[
:, :num_tokens_to_copy
]
# Copy bias weights to new lm head
if has_new_lm_head_bias:
new_lm_head.bias.data[:num_tokens_to_copy] = old_lm_head.bias.data[:num_tokens_to_copy]
else:
# Copy old lm head weights to new lm head
if not transposed:
new_lm_head.weight.data[:num_tokens_to_copy, :] = old_lm_head.weight.data[:num_tokens_to_copy, :]
else:
new_lm_head.weight.data[:, :num_tokens_to_copy] = old_lm_head.weight.data[:, :num_tokens_to_copy]
# Copy bias weights to new lm head
if has_new_lm_head_bias:
new_lm_head.bias.data[:num_tokens_to_copy] = old_lm_head.bias.data[:num_tokens_to_copy]
return new_lm_head
def resize_position_embeddings(self, new_num_position_embeddings: int):
raise NotImplementedError(
f"`resize_position_embeddings` is not implemented for {self.__class__}`. To implement it, you should "
f"overwrite this method in the class {self.__class__} in `modeling_{self.__class__.__module__}.py`"
)
def get_position_embeddings(self) -> Union[nn.Embedding, Tuple[nn.Embedding]]:
raise NotImplementedError(
f"`get_position_embeddings` is not implemented for {self.__class__}`. To implement it, you should "
f"overwrite this method in the class {self.__class__} in `modeling_{self.__class__.__module__}.py`"
)
def init_weights(self):
"""
If needed prunes and maybe initializes weights.
"""
# Prune heads if needed
if self.config.pruned_heads:
self.prune_heads(self.config.pruned_heads)
if _init_weights:
# Initialize weights
self.apply(self._init_weights)
# Tie weights should be skipped when not initializing all weights
# since from_pretrained(...) calls tie weights anyways
self.tie_weights()
def prune_heads(self, heads_to_prune: Dict[int, List[int]]):
"""
Prunes heads of the base model.
Arguments:
heads_to_prune (`Dict[int, List[int]]`):
Dictionary with keys being selected layer indices (`int`) and associated values being the list of heads
to prune in said layer (list of `int`). For instance {1: [0, 2], 2: [2, 3]} will prune heads 0 and 2 on
layer 1 and heads 2 and 3 on layer 2.
"""
# save new sets of pruned heads as union of previously stored pruned heads and newly pruned heads
for layer, heads in heads_to_prune.items():
union_heads = set(self.config.pruned_heads.get(layer, [])) | set(heads)
self.config.pruned_heads[layer] = list(union_heads) # Unfortunately we have to store it as list for JSON
self.base_model._prune_heads(heads_to_prune)
def gradient_checkpointing_enable(self):
"""
Activates gradient checkpointing for the current model.
Note that in other frameworks this feature can be referred to as "activation checkpointing" or "checkpoint
activations".
"""
if not self.supports_gradient_checkpointing:
raise ValueError(f"{self.__class__.__name__} does not support gradient checkpointing.")
self.apply(partial(self._set_gradient_checkpointing, value=True))
def gradient_checkpointing_disable(self):
"""
Deactivates gradient checkpointing for the current model.
Note that in other frameworks this feature can be referred to as "activation checkpointing" or "checkpoint
activations".
"""
if self.supports_gradient_checkpointing:
self.apply(partial(self._set_gradient_checkpointing, value=False))
@property
def is_gradient_checkpointing(self) -> bool:
"""
Whether gradient checkpointing is activated for this model or not.
Note that in other frameworks this feature can be referred to as "activation checkpointing" or "checkpoint
activations".
"""
return any(hasattr(m, "gradient_checkpointing") and m.gradient_checkpointing for m in self.modules())
def save_pretrained(
self,
save_directory: Union[str, os.PathLike],
save_config: bool = True,
state_dict: Optional[dict] = None,
save_function: Callable = torch.save,
push_to_hub: bool = False,
**kwargs,
):
"""
Save a model and its configuration file to a directory, so that it can be re-loaded using the
`[`~PreTrainedModel.from_pretrained`]` class method.
Arguments:
save_directory (`str` or `os.PathLike`):
Directory to which to save. Will be created if it doesn't exist.
save_config (`bool`, *optional*, defaults to `True`):
Whether or not to save the config of the model. Useful when in distributed training like TPUs and need
to call this function on all processes. In this case, set `save_config=True` only on the main process
to avoid race conditions.
state_dict (nested dictionary of `torch.Tensor`):
The state dictionary of the model to save. Will default to `self.state_dict()`, but can be used to only
save parts of the model or if special precautions need to be taken when recovering the state dictionary
of a model (like when using model parallelism).
save_function (`Callable`):
The function to use to save the state dictionary. Useful on distributed training like TPUs when one
need to replace `torch.save` by another method.
push_to_hub (`bool`, *optional*, defaults to `False`):
Whether or not to push your model to the Hugging Face model hub after saving it.
<Tip warning={true}>
Using `push_to_hub=True` will synchronize the repository you are pushing to with `save_directory`,
which requires `save_directory` to be a local clone of the repo you are pushing to if it's an existing
folder. Pass along `temp_dir=True` to use a temporary directory instead.
</Tip>
kwargs:
Additional key word arguments passed along to the [`~file_utils.PushToHubMixin.push_to_hub`] method.
"""
if os.path.isfile(save_directory):
logger.error(f"Provided path ({save_directory}) should be a directory, not a file")
return
if push_to_hub:
commit_message = kwargs.pop("commit_message", None)
repo = self._create_or_get_repo(save_directory, **kwargs)
os.makedirs(save_directory, exist_ok=True)
# Only save the model itself if we are using distributed training
model_to_save = unwrap_model(self)
# save the string version of dtype to the config, e.g. convert torch.float32 => "float32"
# we currently don't use this setting automatically, but may start to use with v5
dtype = get_parameter_dtype(model_to_save)
model_to_save.config.torch_dtype = str(dtype).split(".")[1]
# Attach architecture to the config
model_to_save.config.architectures = [model_to_save.__class__.__name__]
# If we have a custom model, we copy the file defining it in the folder and set the attributes so it can be
# loaded from the Hub.
if self._auto_class is not None:
custom_object_save(self, save_directory, config=self.config)
# Save the config
if save_config:
model_to_save.config.save_pretrained(save_directory)
# Save the model
if state_dict is None:
state_dict = model_to_save.state_dict()
# Handle the case where some state_dict keys shouldn't be saved
if self._keys_to_ignore_on_save is not None:
for ignore_key in self._keys_to_ignore_on_save:
if ignore_key in state_dict.keys():
del state_dict[ignore_key]
# If we save using the predefined names, we can load using `from_pretrained`
output_model_file = os.path.join(save_directory, WEIGHTS_NAME)
save_function(state_dict, output_model_file)
logger.info(f"Model weights saved in {output_model_file}")
if push_to_hub:
url = self._push_to_hub(repo, commit_message=commit_message)
logger.info(f"Model pushed to the hub in this commit: {url}")
@classmethod
def from_pretrained(cls, pretrained_model_name_or_path: Optional[Union[str, os.PathLike]], *model_args, **kwargs):
r"""
Instantiate a pretrained pytorch model from a pre-trained model configuration.
The model is set in evaluation mode by default using `model.eval()` (Dropout modules are deactivated). To train
the model, you should first set it back in training mode with `model.train()`.
The warning *Weights from XXX not initialized from pretrained model* means that the weights of XXX do not come
pretrained with the rest of the model. It is up to you to train those weights with a downstream fine-tuning
task.
The warning *Weights from XXX not used in YYY* means that the layer XXX is not used by YYY, therefore those
weights are discarded.
Parameters:
pretrained_model_name_or_path (`str` or `os.PathLike`, *optional*):
Can be either:
- A string, the *model id* of a pretrained model hosted inside a model repo on huggingface.co.
Valid model ids can be located at the root-level, like `bert-base-uncased`, or namespaced under a
user or organization name, like `dbmdz/bert-base-german-cased`.
- A path to a *directory* containing model weights saved using
[`~PreTrainedModel.save_pretrained`], e.g., `./my_model_directory/`.
- A path or url to a *tensorflow index checkpoint file* (e.g, `./tf_model/model.ckpt.index`). In
this case, `from_tf` should be set to `True` and a configuration object should be provided as
`config` argument. This loading path is slower than converting the TensorFlow checkpoint in a
PyTorch model using the provided conversion scripts and loading the PyTorch model afterwards.
- A path or url to a model folder containing a *flax checkpoint file* in *.msgpack* format (e.g,
`./flax_model/` containing `flax_model.msgpack`). In this case, `from_flax` should be set to
`True`.
- `None` if you are both providing the configuration and state dictionary (resp. with keyword
arguments `config` and `state_dict`).
model_args (sequence of positional arguments, *optional*):
All remaining positional arguments will be passed to the underlying model's `__init__` method.
config (`Union[PretrainedConfig, str, os.PathLike]`, *optional*):
Can be either:
- an instance of a class derived from [`PretrainedConfig`],
- a string or path valid as input to [`~PretrainedConfig.from_pretrained`].
Configuration for the model to use instead of an automatically loaded configuration. Configuration can
be automatically loaded when:
- The model is a model provided by the library (loaded with the *model id* string of a pretrained
model).
- The model was saved using [`~PreTrainedModel.save_pretrained`] and is reloaded by supplying the
save directory.
- The model is loaded by supplying a local directory as `pretrained_model_name_or_path` and a
configuration JSON file named *config.json* is found in the directory.
state_dict (`Dict[str, torch.Tensor]`, *optional*):
A state dictionary to use instead of a state dictionary loaded from saved weights file.
This option can be used if you want to create a model from a pretrained configuration but load your own
weights. In this case though, you should check if using [`~PreTrainedModel.save_pretrained`] and
[`~PreTrainedModel.from_pretrained`] is not a simpler option.
cache_dir (`Union[str, os.PathLike]`, *optional*):
Path to a directory in which a downloaded pretrained model configuration should be cached if the
standard cache should not be used.
from_tf (`bool`, *optional*, defaults to `False`):
Load the model weights from a TensorFlow checkpoint save file (see docstring of
`pretrained_model_name_or_path` argument).
from_flax (`bool`, *optional*, defaults to `False`):
Load the model weights from a Flax checkpoint save file (see docstring of
`pretrained_model_name_or_path` argument).
ignore_mismatched_sizes (`bool`, *optional*, defaults to `False`):
Whether or not to raise an error if some of the weights from the checkpoint do not have the same size
as the weights of the model (if for instance, you are instantiating a model with 10 labels from a
checkpoint with 3 labels).
force_download (`bool`, *optional*, defaults to `False`):
Whether or not to force the (re-)download of the model weights and configuration files, overriding the
cached versions if they exist.
resume_download (`bool`, *optional*, defaults to `False`):
Whether or not to delete incompletely received files. Will attempt to resume the download if such a
file exists.
proxies (`Dict[str, str]`, *optional*):
A dictionary of proxy servers to use by protocol or endpoint, e.g., `{'http': 'foo.bar:3128',
'http://hostname': 'foo.bar:4012'}`. The proxies are used on each request.
output_loading_info(`bool`, *optional*, defaults to `False`):
Whether ot not to also return a dictionary containing missing keys, unexpected keys and error messages.
local_files_only(`bool`, *optional*, defaults to `False`):
Whether or not to only look at local files (i.e., do not try to download the model).
use_auth_token (`str` or *bool*, *optional*):
The token to use as HTTP bearer authorization for remote files. If `True`, will use the token generated
when running `transformers-cli login` (stored in `~/.huggingface`).
revision(`str`, *optional*, defaults to `"main"`):
The specific model version to use. It can be a branch name, a tag name, or a commit id, since we use a
git-based system for storing models and other artifacts on huggingface.co, so `revision` can be any
identifier allowed by git.
mirror(`str`, *optional*):
Mirror source to accelerate downloads in China. If you are from China and have an accessibility
problem, you can set this option to resolve it. Note that we do not guarantee the timeliness or safety.
Please refer to the mirror site for more information.
_fast_init(`bool`, *optional*, defaults to ```True`):
Whether or not to disable fast initialization.
low_cpu_mem_usage(`bool``, *optional*, defaults to ```False`):
Tries to not use more than 1x model size in CPU memory (including peak memory) while loading the model.
This is an experimental feature and a subject to change at any moment.
torch_dtype (`str` or `torch.dtype`, *optional*):
Override the default `torch.dtype` and load the model under this dtype. If `"auto"` is passed the dtype
will be automatically derived from the model's weights.
<Tip warning={true}>
One should only disable *_fast_init* to ensure backwards compatibility with `transformers.__version__ <
4.6.0` for seeded model initialization. This argument will be removed at the next major version. See
[pull request 11471](https://github.com/huggingface/transformers/pull/11471) for more information.
</Tip>
kwargs (remaining dictionary of keyword arguments, *optional*):
Can be used to update the configuration object (after it being loaded) and initiate the model (e.g.,
`output_attentions=True`). Behaves differently depending on whether a `config` is provided or
automatically loaded:
- If a configuration is provided with `config`, `**kwargs` will be directly passed to the
underlying model's `__init__` method (we assume all relevant updates to the configuration have
already been done)
- If a configuration is not provided, `kwargs` will be first passed to the configuration class
initialization function ([`~PretrainedConfig.from_pretrained`]). Each key of `kwargs` that
corresponds to a configuration attribute will be used to override said attribute with the
supplied `kwargs` value. Remaining keys that do not correspond to any configuration attribute
will be passed to the underlying model's `__init__` function.
<Tip>
Passing `use_auth_token=True`` is required when you want to use a private model.
</Tip>
<Tip>
Activate the special ["offline-mode"](https://huggingface.co/transformers/installation.html#offline-mode) to
use this method in a firewalled environment.
</Tip>
Examples:
```python
>>> from transformers import BertConfig, BertModel
>>> # Download model and configuration from huggingface.co and cache.
>>> model = BertModel.from_pretrained("bert-base-uncased")
>>> # Model was saved using *save_pretrained('./test/saved_model/')* (for example purposes, not runnable).
>>> model = BertModel.from_pretrained("./test/saved_model/")
>>> # Update configuration during loading.
>>> model = BertModel.from_pretrained("bert-base-uncased", output_attentions=True)
>>> assert model.config.output_attentions == True
>>> # Loading from a TF checkpoint file instead of a PyTorch model (slower, for example purposes, not runnable).
>>> config = BertConfig.from_json_file("./tf_model/my_tf_model_config.json")
>>> model = BertModel.from_pretrained("./tf_model/my_tf_checkpoint.ckpt.index", from_tf=True, config=config)
>>> # Loading from a Flax checkpoint file instead of a PyTorch model (slower)
>>> model = BertModel.from_pretrained("bert-base-uncased", from_flax=True)
```"""
config = kwargs.pop("config", None)
state_dict = kwargs.pop("state_dict", None)
cache_dir = kwargs.pop("cache_dir", None)
from_tf = kwargs.pop("from_tf", False)
from_flax = kwargs.pop("from_flax", False)
ignore_mismatched_sizes = kwargs.pop("ignore_mismatched_sizes", False)
force_download = kwargs.pop("force_download", False)
resume_download = kwargs.pop("resume_download", False)
proxies = kwargs.pop("proxies", None)
output_loading_info = kwargs.pop("output_loading_info", False)
local_files_only = kwargs.pop("local_files_only", False)
use_auth_token = kwargs.pop("use_auth_token", None)
revision = kwargs.pop("revision", None)
mirror = kwargs.pop("mirror", None)
from_pipeline = kwargs.pop("_from_pipeline", None)
from_auto_class = kwargs.pop("_from_auto", False)
_fast_init = kwargs.pop("_fast_init", True)
torch_dtype = kwargs.pop("torch_dtype", None)
low_cpu_mem_usage = kwargs.pop("low_cpu_mem_usage", False)
from_pt = not (from_tf | from_flax)
user_agent = {"file_type": "model", "framework": "pytorch", "from_auto_class": from_auto_class}
if from_pipeline is not None:
user_agent["using_pipeline"] = from_pipeline
if is_offline_mode() and not local_files_only:
logger.info("Offline mode: forcing local_files_only=True")
local_files_only = True
# Load config if we don't provide a configuration
if not isinstance(config, PretrainedConfig):
config_path = config if config is not None else pretrained_model_name_or_path
config, model_kwargs = cls.config_class.from_pretrained(
config_path,
cache_dir=cache_dir,
return_unused_kwargs=True,
force_download=force_download,
resume_download=resume_download,
proxies=proxies,
local_files_only=local_files_only,
use_auth_token=use_auth_token,
revision=revision,
_from_auto=from_auto_class,
_from_pipeline=from_pipeline,
**kwargs,
)
else:
model_kwargs = kwargs
# Load model
if pretrained_model_name_or_path is not None:
pretrained_model_name_or_path = str(pretrained_model_name_or_path)
if os.path.isdir(pretrained_model_name_or_path):
if from_tf and os.path.isfile(os.path.join(pretrained_model_name_or_path, TF_WEIGHTS_NAME + ".index")):
# Load from a TF 1.0 checkpoint in priority if from_tf
archive_file = os.path.join(pretrained_model_name_or_path, TF_WEIGHTS_NAME + ".index")
elif from_tf and os.path.isfile(os.path.join(pretrained_model_name_or_path, TF2_WEIGHTS_NAME)):
# Load from a TF 2.0 checkpoint in priority if from_tf
archive_file = os.path.join(pretrained_model_name_or_path, TF2_WEIGHTS_NAME)
elif from_flax and os.path.isfile(os.path.join(pretrained_model_name_or_path, FLAX_WEIGHTS_NAME)):
# Load from a Flax checkpoint in priority if from_flax
archive_file = os.path.join(pretrained_model_name_or_path, FLAX_WEIGHTS_NAME)
elif os.path.isfile(os.path.join(pretrained_model_name_or_path, WEIGHTS_NAME)):
# Load from a PyTorch checkpoint
archive_file = os.path.join(pretrained_model_name_or_path, WEIGHTS_NAME)
# At this stage we don't have a weight file so we will raise an error.
elif os.path.isfile(
os.path.join(pretrained_model_name_or_path, TF_WEIGHTS_NAME + ".index")
) or os.path.isfile(os.path.join(pretrained_model_name_or_path, TF2_WEIGHTS_NAME)):
raise EnvironmentError(
f"Error no file named {WEIGHTS_NAME} found in directory {pretrained_model_name_or_path} but "
"there is a file for TensorFlow weights. Use `from_tf=True` to load this model from those "
"weights."
)
elif os.path.join(pretrained_model_name_or_path, FLAX_WEIGHTS_NAME):
raise EnvironmentError(
f"Error no file named {WEIGHTS_NAME} found in directory {pretrained_model_name_or_path} but "
"there is a file for Flax weights. Use `from_flax=True` to load this model from those "
"weights."
)
else:
raise EnvironmentError(
f"Error no file named {WEIGHTS_NAME}, {TF2_WEIGHTS_NAME}, {TF_WEIGHTS_NAME + '.index'} or "
f"{FLAX_WEIGHTS_NAME} found in directory {pretrained_model_name_or_path}."
)
elif os.path.isfile(pretrained_model_name_or_path) or is_remote_url(pretrained_model_name_or_path):
archive_file = pretrained_model_name_or_path
elif os.path.isfile(pretrained_model_name_or_path + ".index"):
if not from_tf:
raise ValueError(
f"We found a TensorFlow checkpoint at {pretrained_model_name_or_path + '.index'}, please set "
"from_tf to True to load from this checkpoint."
)
archive_file = pretrained_model_name_or_path + ".index"
else:
# set correct filename
if from_tf:
filename = TF2_WEIGHTS_NAME
elif from_flax:
filename = FLAX_WEIGHTS_NAME
else:
filename = WEIGHTS_NAME
archive_file = hf_bucket_url(
pretrained_model_name_or_path,
filename=filename,
revision=revision,
mirror=mirror,
)
try:
# Load from URL or cache if already cached
resolved_archive_file = cached_path(
archive_file,
cache_dir=cache_dir,
force_download=force_download,
proxies=proxies,
resume_download=resume_download,
local_files_only=local_files_only,
use_auth_token=use_auth_token,
user_agent=user_agent,
)
except RepositoryNotFoundError:
raise EnvironmentError(
f"{pretrained_model_name_or_path} is not a local folder and is not a valid model identifier "
"listed on 'https://huggingface.co/models'\nIf this is a private repository, make sure to pass a "
"token having permission to this repo with `use_auth_token` or log in with `huggingface-cli "
"login` and pass `use_auth_token=True`."
)
except RevisionNotFoundError:
raise EnvironmentError(
f"{revision} is not a valid git identifier (branch name, tag name or commit id) that exists for "
"this model name. Check the model page at "
f"'https://huggingface.co/{pretrained_model_name_or_path}' for available revisions."
)
except EntryNotFoundError:
if filename == WEIGHTS_NAME:
has_file_kwargs = {
"revision": revision,
"mirror": mirror,
"proxies": proxies,
"use_auth_token": use_auth_token,
}
if has_file(pretrained_model_name_or_path, TF2_WEIGHTS_NAME, **has_file_kwargs):
raise EnvironmentError(
f"{pretrained_model_name_or_path} does not appear to have a file named {WEIGHTS_NAME} but "
"there is a file for TensorFlow weights. Use `from_tf=True` to load this model from those "
"weights."
)
elif has_file(pretrained_model_name_or_path, FLAX_WEIGHTS_NAME, **has_file_kwargs):
raise EnvironmentError(
f"{pretrained_model_name_or_path} does not appear to have a file named {WEIGHTS_NAME} but "
"there is a file for Flax weights. Use `from_flax=True` to load this model from those "
"weights."
)
else:
raise EnvironmentError(
f"{pretrained_model_name_or_path} does not appear to have a file named {WEIGHTS_NAME}, "
f"{TF2_WEIGHTS_NAME}, {TF_WEIGHTS_NAME} or {FLAX_WEIGHTS_NAME}."
)
else:
raise EnvironmentError(
f"{pretrained_model_name_or_path} does not appear to have a file named {filename}."
)
except HTTPError:
raise EnvironmentError(
"We couldn't connect to 'https://huggingface.co/' to load this model and it looks like "
f"{pretrained_model_name_or_path} is not the path to a directory conaining a a file named "
f"{WEIGHTS_NAME}, {TF2_WEIGHTS_NAME}, {TF_WEIGHTS_NAME} or {FLAX_WEIGHTS_NAME}.\n"
"Checkout your internet connection or see how to run the library in offline mode at "
"'https://huggingface.co/docs/transformers/installation#offline-mode'."
)
except EnvironmentError:
raise EnvironmentError(
f"Can't load the model for '{pretrained_model_name_or_path}'. If you were trying to load it from "
"'https://huggingface.co/models', make sure you don't have a local directory with the same name. "
f"Otherwise, make sure '{pretrained_model_name_or_path}' is the correct path to a directory "
f"containing a file named {WEIGHTS_NAME}, {TF2_WEIGHTS_NAME}, {TF_WEIGHTS_NAME} or "
f"{FLAX_WEIGHTS_NAME}."
)
if resolved_archive_file == archive_file:
logger.info(f"loading weights file {archive_file}")
else:
logger.info(f"loading weights file {archive_file} from cache at {resolved_archive_file}")
else:
resolved_archive_file = None
# load pt weights early so that we know which dtype to init the model under
if from_pt:
if state_dict is None:
try:
state_dict = torch.load(resolved_archive_file, map_location="cpu")
except Exception as e:
try:
with open(resolved_archive_file) as f:
if f.read().startswith("version"):
raise OSError(
"You seem to have cloned a repository without having git-lfs installed. Please install "
"git-lfs and run `git lfs install` followed by `git lfs pull` in the folder "
"you cloned."
)
else:
raise ValueError from e
except (UnicodeDecodeError, ValueError):
raise OSError(
f"Unable to load weights from pytorch checkpoint file for '{pretrained_model_name_or_path}' "
f"at '{resolved_archive_file}'. "
"If you tried to load a PyTorch model from a TF 2.0 checkpoint, please set from_tf=True."
)
# set dtype to instantiate the model under:
# 1. If torch_dtype is not None, we use that dtype
# 2. If torch_dtype is "auto", we auto-detect dtype from the loaded state_dict, by checking its first
# weights entry - we assume all weights are of the same dtype
# we also may have config.torch_dtype available, but we won't rely on it till v5
dtype_orig = None
if torch_dtype is not None:
if isinstance(torch_dtype, str):
if torch_dtype == "auto":
torch_dtype = next(iter(state_dict.values())).dtype
else:
raise ValueError(
f"`torch_dtype` can be either a `torch.dtype` or `auto`, but received {torch_dtype}"
)
dtype_orig = cls._set_default_torch_dtype(torch_dtype)
if low_cpu_mem_usage:
# save the keys
loaded_state_dict_keys = [k for k in state_dict.keys()]
del state_dict # free CPU memory - will reload again later
config.name_or_path = pretrained_model_name_or_path
# Instantiate model.
if is_deepspeed_zero3_enabled():
import deepspeed
logger.info("Detected DeepSpeed ZeRO-3: activating zero.init() for this model")
# this immediately partitions the model across all gpus, to avoid the overhead in time
# and memory copying it on CPU or each GPU first
with deepspeed.zero.Init(config_dict_or_path=deepspeed_config()):
with no_init_weights(_enable=_fast_init):
model = cls(config, *model_args, **model_kwargs)
else:
with no_init_weights(_enable=_fast_init):
model = cls(config, *model_args, **model_kwargs)
if from_pt:
# restore default dtype
if dtype_orig is not None:
torch.set_default_dtype(dtype_orig)
if from_tf:
if resolved_archive_file.endswith(".index"):
# Load from a TensorFlow 1.X checkpoint - provided by original authors
model = cls.load_tf_weights(model, config, resolved_archive_file[:-6]) # Remove the '.index'
else:
# Load from our TensorFlow 2.0 checkpoints
try:
from .modeling_tf_pytorch_utils import load_tf2_checkpoint_in_pytorch_model
model = load_tf2_checkpoint_in_pytorch_model(model, resolved_archive_file, allow_missing_keys=True)
except ImportError:
logger.error(
"Loading a TensorFlow model in PyTorch, requires both PyTorch and TensorFlow to be installed. Please see "
"https://pytorch.org/ and https://www.tensorflow.org/install/ for installation instructions."
)
raise
elif from_flax:
try:
from .modeling_flax_pytorch_utils import load_flax_checkpoint_in_pytorch_model
model = load_flax_checkpoint_in_pytorch_model(model, resolved_archive_file)
except ImportError:
logger.error(
"Loading a Flax model in PyTorch, requires both PyTorch and Flax to be installed. Please see "
"https://pytorch.org/ and https://flax.readthedocs.io/en/latest/installation.html for installation instructions."
)
raise
elif from_pt:
if low_cpu_mem_usage:
cls._load_state_dict_into_model_low_mem(model, loaded_state_dict_keys, resolved_archive_file)
else:
model, missing_keys, unexpected_keys, mismatched_keys, error_msgs = cls._load_state_dict_into_model(
model,
state_dict,
pretrained_model_name_or_path,
ignore_mismatched_sizes=ignore_mismatched_sizes,
_fast_init=_fast_init,
)
# make sure token embedding weights are still tied if needed
model.tie_weights()
# Set model in evaluation mode to deactivate DropOut modules by default
model.eval()
if output_loading_info:
loading_info = {
"missing_keys": missing_keys,
"unexpected_keys": unexpected_keys,
"mismatched_keys": mismatched_keys,
"error_msgs": error_msgs,
}
return model, loading_info
return model
@classmethod
def _load_state_dict_into_model(
cls, model, state_dict, pretrained_model_name_or_path, ignore_mismatched_sizes=False, _fast_init=True
):
# Convert old format to new format if needed from a PyTorch state_dict
old_keys = []
new_keys = []
for key in state_dict.keys():
new_key = None
if "gamma" in key:
new_key = key.replace("gamma", "weight")
if "beta" in key:
new_key = key.replace("beta", "bias")
if new_key:
old_keys.append(key)
new_keys.append(new_key)
for old_key, new_key in zip(old_keys, new_keys):
state_dict[new_key] = state_dict.pop(old_key)
# Retrieve missing & unexpected_keys
model_state_dict = model.state_dict()
expected_keys = list(model_state_dict.keys())
loaded_keys = list(state_dict.keys())
prefix = model.base_model_prefix
if len(prefix) > 0:
has_prefix_module = any(s.startswith(prefix) for s in loaded_keys)
expects_prefix_module = any(s.startswith(prefix) for s in expected_keys)
else:
has_prefix_module = False
expects_prefix_module = False
# key re-naming operations are never done on the keys
# that are loaded, but always on the keys of the newly initialized model
remove_prefix_from_model = not has_prefix_module and expects_prefix_module
add_prefix_to_model = has_prefix_module and not expects_prefix_module
if remove_prefix_from_model:
expected_keys_not_prefixed = [s for s in expected_keys if not s.startswith(prefix)]
expected_keys = [".".join(s.split(".")[1:]) if s.startswith(prefix) else s for s in expected_keys]
elif add_prefix_to_model:
expected_keys = [".".join([prefix, s]) for s in expected_keys]
missing_keys = list(set(expected_keys) - set(loaded_keys))
unexpected_keys = list(set(loaded_keys) - set(expected_keys))
# Mistmatched keys contains tuples key/shape1/shape2 of weights in the checkpoint that have a shape not
# matching the weights in the model.
mismatched_keys = []
if ignore_mismatched_sizes:
for checkpoint_key in loaded_keys:
model_key = checkpoint_key
if remove_prefix_from_model:
# The model key starts with `prefix` but `checkpoint_key` doesn't so we add it.
model_key = f"{prefix}.{checkpoint_key}"
elif add_prefix_to_model:
# The model key doesn't start with `prefix` but `checkpoint_key` does so we remove it.
model_key = ".".join(checkpoint_key.split(".")[1:])
if (
model_key in model_state_dict
and state_dict[checkpoint_key].shape != model_state_dict[model_key].shape
):
mismatched_keys.append(
(checkpoint_key, state_dict[checkpoint_key].shape, model_state_dict[model_key].shape)
)
del state_dict[checkpoint_key]
# Some models may have keys that are not in the state by design, removing them before needlessly warning
# the user.
if cls._keys_to_ignore_on_load_missing is not None:
for pat in cls._keys_to_ignore_on_load_missing:
missing_keys = [k for k in missing_keys if re.search(pat, k) is None]
if cls._keys_to_ignore_on_load_unexpected is not None:
for pat in cls._keys_to_ignore_on_load_unexpected:
unexpected_keys = [k for k in unexpected_keys if re.search(pat, k) is None]
if _fast_init:
# retrieve unintialized modules and initialize
uninitialized_modules = model.retrieve_modules_from_names(
missing_keys, add_prefix=add_prefix_to_model, remove_prefix=remove_prefix_from_model
)
for module in uninitialized_modules:
model._init_weights(module)
# copy state_dict so _load_from_state_dict can modify it
metadata = getattr(state_dict, "_metadata", None)
state_dict = state_dict.copy()
if metadata is not None:
state_dict._metadata = metadata
error_msgs = []
# PyTorch's `_load_from_state_dict` does not copy parameters in a module's descendants
# so we need to apply the function recursively.
def load(module: nn.Module, prefix=""):
local_metadata = {} if metadata is None else metadata.get(prefix[:-1], {})
args = (state_dict, prefix, local_metadata, True, [], [], error_msgs)
if is_deepspeed_zero3_enabled():
import deepspeed
# because zero3 puts placeholders in model params, this context
# manager gathers (unpartitions) the params of the current layer, then loads from
# the state dict and then re-partitions them again
with deepspeed.zero.GatheredParameters(list(module.parameters(recurse=False)), modifier_rank=0):
if torch.distributed.get_rank() == 0:
module._load_from_state_dict(*args)
else:
module._load_from_state_dict(*args)
for name, child in module._modules.items():
if child is not None:
load(child, prefix + name + ".")
# Make sure we are able to load base models as well as derived models (with heads)
start_prefix = ""
model_to_load = model
if len(cls.base_model_prefix) > 0 and not hasattr(model, cls.base_model_prefix) and has_prefix_module:
start_prefix = cls.base_model_prefix + "."
if len(cls.base_model_prefix) > 0 and hasattr(model, cls.base_model_prefix) and not has_prefix_module:
model_to_load = getattr(model, cls.base_model_prefix)
if any(key in expected_keys_not_prefixed for key in loaded_keys):
raise ValueError(
"The state dictionary of the model you are training to load is corrupted. Are you sure it was "
"properly saved?"
)
load(model_to_load, prefix=start_prefix)
if len(error_msgs) > 0:
error_msg = "\n\t".join(error_msgs)
raise RuntimeError(f"Error(s) in loading state_dict for {model.__class__.__name__}:\n\t{error_msg}")
if len(unexpected_keys) > 0:
logger.warning(
f"Some weights of the model checkpoint at {pretrained_model_name_or_path} were not used when "
f"initializing {model.__class__.__name__}: {unexpected_keys}\n"
f"- This IS expected if you are initializing {model.__class__.__name__} from the checkpoint of a model trained on another task "
f"or with another architecture (e.g. initializing a BertForSequenceClassification model from a BertForPreTraining model).\n"
f"- This IS NOT expected if you are initializing {model.__class__.__name__} from the checkpoint of a model that you expect "
f"to be exactly identical (initializing a BertForSequenceClassification model from a BertForSequenceClassification model)."
)
else:
logger.info(f"All model checkpoint weights were used when initializing {model.__class__.__name__}.\n")
if len(missing_keys) > 0:
logger.warning(
f"Some weights of {model.__class__.__name__} were not initialized from the model checkpoint at {pretrained_model_name_or_path} "
f"and are newly initialized: {missing_keys}\n"
f"You should probably TRAIN this model on a down-stream task to be able to use it for predictions and inference."
)
elif len(mismatched_keys) == 0:
logger.info(
f"All the weights of {model.__class__.__name__} were initialized from the model checkpoint at {pretrained_model_name_or_path}.\n"
f"If your task is similar to the task the model of the checkpoint was trained on, "
f"you can already use {model.__class__.__name__} for predictions without further training."
)
if len(mismatched_keys) > 0:
mismatched_warning = "\n".join(
[
f"- {key}: found shape {shape1} in the checkpoint and {shape2} in the model instantiated"
for key, shape1, shape2 in mismatched_keys
]
)
logger.warning(
f"Some weights of {model.__class__.__name__} were not initialized from the model checkpoint at {pretrained_model_name_or_path} "
f"and are newly initialized because the shapes did not match:\n{mismatched_warning}\n"
f"You should probably TRAIN this model on a down-stream task to be able to use it for predictions and inference."
)
return model, missing_keys, unexpected_keys, mismatched_keys, error_msgs
def retrieve_modules_from_names(self, names, add_prefix=False, remove_prefix=False):
module_keys = set([".".join(key.split(".")[:-1]) for key in names])
# torch.nn.ParameterList is a special case where two parameter keywords
# are appended to the module name, *e.g.* bert.special_embeddings.0
module_keys = module_keys.union(set([".".join(key.split(".")[:-2]) for key in names if key[-1].isdigit()]))
retrieved_modules = []
# retrieve all modules that has at least one missing weight name
for name, module in self.named_modules():
if remove_prefix:
name = ".".join(name.split(".")[1:]) if name.startswith(self.base_model_prefix) else name
elif add_prefix:
name = ".".join([self.base_model_prefix, name]) if len(name) > 0 else self.base_model_prefix
if name in module_keys:
retrieved_modules.append(module)
return retrieved_modules
@classmethod
def _load_state_dict_into_model_low_mem(cls, model, loaded_state_dict_keys, resolved_archive_file):
"""
This is an experimental function that loads the model using ~1.x model size CPU memory
Before it gets called we do:
1. save which state_dict keys we have
2. drop state_dict before model is created, since the latter takes 1x model size memory
Here then we continue:
3. switch to the meta device all params/buffers that are going to be replaced from the loaded state_dict
4. load state_dict 2nd time
5. replace the params/buffers from the state_dict
Currently, it doesn't handle missing_keys, unexpected_keys, mismatched_keys. It can't handle deepspeed.
"""
require_version_core("torch>=1.9")
if is_deepspeed_zero3_enabled():
raise ValueError("low_cpu_mem_usage arg cannot be used with DeepSpeed ZeRO-3")
# a helper util to find the last sub-module and the param/buffer name
def find_submodule_and_param_name(model, long_key):
split_key = long_key.split(".")
submodule = model
while len(split_key) > 1:
if hasattr(submodule, split_key[0]):
submodule = getattr(submodule, split_key[0])
del split_key[0]
else:
submodule = None
break
return submodule, split_key[0]
# dematerialize param storage for keys that are going to be replaced by state_dict, by
# putting those on the meta device
for k in loaded_state_dict_keys:
submodule, param_name = find_submodule_and_param_name(model, k)
if submodule is not None:
# selectively switch to the meta device only those params/buffers that will
# be next replaced from state_dict. This a complex way to do p.to_("meta")
# since we have no in-place to_ for tensors.
new_val = getattr(submodule, param_name)
if isinstance(new_val, torch.nn.Parameter):
# isinstance returns False for Params on meta device, so switch after the check
new_val = torch.nn.Parameter(new_val.to("meta"))
else:
new_val = new_val.to("meta")
setattr(submodule, param_name, new_val)
# only now can load state_dict
state_dict = torch.load(resolved_archive_file, map_location="cpu")
# materialize state_dict entries one by one on CPU
for k in loaded_state_dict_keys:
submodule, param_name = find_submodule_and_param_name(model, k)
if submodule is not None:
new_val = state_dict[k]
if isinstance(getattr(submodule, param_name), torch.nn.Parameter):
new_val = torch.nn.Parameter(new_val)
setattr(submodule, param_name, new_val)
del state_dict
@classmethod
def register_for_auto_class(cls, auto_class="AutoModel"):
"""
Register this class with a given auto class. This should only be used for custom models as the ones in the
library are already mapped with an auto class.
<Tip warning={true}>
This API is experimental and may have some slight breaking changes in the next releases.
</Tip>
Args:
auto_class (`str` or `type`, *optional*, defaults to `"AutoModel"`):
The auto class to register this new model with.
"""
if not isinstance(auto_class, str):
auto_class = auto_class.__name__
import transformers.models.auto as auto_module
if not hasattr(auto_module, auto_class):
raise ValueError(f"{auto_class} is not a valid auto class.")
cls._auto_class = auto_class
# To update the docstring, we need to copy the method, otherwise we change the original docstring.
PreTrainedModel.push_to_hub = copy_func(PreTrainedModel.push_to_hub)
PreTrainedModel.push_to_hub.__doc__ = PreTrainedModel.push_to_hub.__doc__.format(
object="model", object_class="AutoModel", object_files="model checkpoint"
)
class Conv1D(nn.Module):
"""
1D-convolutional layer as defined by Radford et al. for OpenAI GPT (and also used in GPT-2).
Basically works like a linear layer but the weights are transposed.
Args:
nf (`int`): The number of output features.
nx (`int`): The number of input features.
"""
def __init__(self, nf, nx):
super().__init__()
self.nf = nf
w = torch.empty(nx, nf)
nn.init.normal_(w, std=0.02)
self.weight = nn.Parameter(w)
self.bias = nn.Parameter(torch.zeros(nf))
def forward(self, x):
size_out = x.size()[:-1] + (self.nf,)
x = torch.addmm(self.bias, x.view(-1, x.size(-1)), self.weight)
x = x.view(size_out)
return x
class PoolerStartLogits(nn.Module):
"""
Compute SQuAD start logits from sequence hidden states.
Args:
config ([`PretrainedConfig`]):
The config used by the model, will be used to grab the `hidden_size` of the model.
"""
def __init__(self, config: PretrainedConfig):
super().__init__()
self.dense = nn.Linear(config.hidden_size, 1)
def forward(
self, hidden_states: torch.FloatTensor, p_mask: Optional[torch.FloatTensor] = None
) -> torch.FloatTensor:
"""
Args:
hidden_states (`torch.FloatTensor` of shape `(batch_size, seq_len, hidden_size)`):
The final hidden states of the model.
p_mask (`torch.FloatTensor` of shape `(batch_size, seq_len)`, *optional*):
Mask for tokens at invalid position, such as query and special symbols (PAD, SEP, CLS). 1.0 means token
should be masked.
Returns:
`torch.FloatTensor`: The start logits for SQuAD.
"""
x = self.dense(hidden_states).squeeze(-1)
if p_mask is not None:
if get_parameter_dtype(self) == torch.float16:
x = x * (1 - p_mask) - 65500 * p_mask
else:
x = x * (1 - p_mask) - 1e30 * p_mask
return x
class PoolerEndLogits(nn.Module):
"""
Compute SQuAD end logits from sequence hidden states.
Args:
config ([`PretrainedConfig`]):
The config used by the model, will be used to grab the `hidden_size` of the model and the `layer_norm_eps`
to use.
"""
def __init__(self, config: PretrainedConfig):
super().__init__()
self.dense_0 = nn.Linear(config.hidden_size * 2, config.hidden_size)
self.activation = nn.Tanh()
self.LayerNorm = nn.LayerNorm(config.hidden_size, eps=config.layer_norm_eps)
self.dense_1 = nn.Linear(config.hidden_size, 1)
def forward(
self,
hidden_states: torch.FloatTensor,
start_states: Optional[torch.FloatTensor] = None,
start_positions: Optional[torch.LongTensor] = None,
p_mask: Optional[torch.FloatTensor] = None,
) -> torch.FloatTensor:
"""
Args:
hidden_states (`torch.FloatTensor` of shape `(batch_size, seq_len, hidden_size)`):
The final hidden states of the model.
start_states (`torch.FloatTensor` of shape `(batch_size, seq_len, hidden_size)`, *optional*):
The hidden states of the first tokens for the labeled span.
start_positions (`torch.LongTensor` of shape `(batch_size,)`, *optional*):
The position of the first token for the labeled span.
p_mask (`torch.FloatTensor` of shape `(batch_size, seq_len)`, *optional*):
Mask for tokens at invalid position, such as query and special symbols (PAD, SEP, CLS). 1.0 means token
should be masked.
<Tip>
One of `start_states` or `start_positions` should be not `None`. If both are set, `start_positions` overrides
`start_states`.
</Tip>
Returns:
`torch.FloatTensor`: The end logits for SQuAD.
"""
assert (
start_states is not None or start_positions is not None
), "One of start_states, start_positions should be not None"
if start_positions is not None:
slen, hsz = hidden_states.shape[-2:]
start_positions = start_positions[:, None, None].expand(-1, -1, hsz) # shape (bsz, 1, hsz)
start_states = hidden_states.gather(-2, start_positions) # shape (bsz, 1, hsz)
start_states = start_states.expand(-1, slen, -1) # shape (bsz, slen, hsz)
x = self.dense_0(torch.cat([hidden_states, start_states], dim=-1))
x = self.activation(x)
x = self.LayerNorm(x)
x = self.dense_1(x).squeeze(-1)
if p_mask is not None:
if get_parameter_dtype(self) == torch.float16:
x = x * (1 - p_mask) - 65500 * p_mask
else:
x = x * (1 - p_mask) - 1e30 * p_mask
return x
class PoolerAnswerClass(nn.Module):
"""
Compute SQuAD 2.0 answer class from classification and start tokens hidden states.
Args:
config ([`PretrainedConfig`]):
The config used by the model, will be used to grab the `hidden_size` of the model.
"""
def __init__(self, config):
super().__init__()
self.dense_0 = nn.Linear(config.hidden_size * 2, config.hidden_size)
self.activation = nn.Tanh()
self.dense_1 = nn.Linear(config.hidden_size, 1, bias=False)
def forward(
self,
hidden_states: torch.FloatTensor,
start_states: Optional[torch.FloatTensor] = None,
start_positions: Optional[torch.LongTensor] = None,
cls_index: Optional[torch.LongTensor] = None,
) -> torch.FloatTensor:
"""
Args:
hidden_states (`torch.FloatTensor` of shape `(batch_size, seq_len, hidden_size)`):
The final hidden states of the model.
start_states (`torch.FloatTensor` of shape `(batch_size, seq_len, hidden_size)`, *optional*):
The hidden states of the first tokens for the labeled span.
start_positions (`torch.LongTensor` of shape `(batch_size,)`, *optional*):
The position of the first token for the labeled span.
cls_index (`torch.LongTensor` of shape `(batch_size,)`, *optional*):
Position of the CLS token for each sentence in the batch. If `None`, takes the last token.
<Tip>
One of `start_states` or `start_positions` should be not `None`. If both are set, `start_positions` overrides
`start_states`.
</Tip>
Returns:
`torch.FloatTensor`: The SQuAD 2.0 answer class.
"""
# No dependency on end_feature so that we can obtain one single `cls_logits` for each sample.
hsz = hidden_states.shape[-1]
assert (
start_states is not None or start_positions is not None
), "One of start_states, start_positions should be not None"
if start_positions is not None:
start_positions = start_positions[:, None, None].expand(-1, -1, hsz) # shape (bsz, 1, hsz)
start_states = hidden_states.gather(-2, start_positions).squeeze(-2) # shape (bsz, hsz)
if cls_index is not None:
cls_index = cls_index[:, None, None].expand(-1, -1, hsz) # shape (bsz, 1, hsz)
cls_token_state = hidden_states.gather(-2, cls_index).squeeze(-2) # shape (bsz, hsz)
else:
cls_token_state = hidden_states[:, -1, :] # shape (bsz, hsz)
x = self.dense_0(torch.cat([start_states, cls_token_state], dim=-1))
x = self.activation(x)
x = self.dense_1(x).squeeze(-1)
return x
@dataclass
class SquadHeadOutput(ModelOutput):
"""
Base class for outputs of question answering models using a [`~modeling_utils.SQuADHead`].
Args:
loss (`torch.FloatTensor` of shape `(1,)`, *optional*, returned if both `start_positions` and `end_positions` are provided):
Classification loss as the sum of start token, end token (and is_impossible if provided) classification
losses.
start_top_log_probs (`torch.FloatTensor` of shape `(batch_size, config.start_n_top)`, *optional*, returned if `start_positions` or `end_positions` is not provided):
Log probabilities for the top config.start_n_top start token possibilities (beam-search).
start_top_index (`torch.LongTensor` of shape `(batch_size, config.start_n_top)`, *optional*, returned if `start_positions` or `end_positions` is not provided):
Indices for the top config.start_n_top start token possibilities (beam-search).
end_top_log_probs (`torch.FloatTensor` of shape `(batch_size, config.start_n_top * config.end_n_top)`, *optional*, returned if `start_positions` or `end_positions` is not provided):
Log probabilities for the top `config.start_n_top * config.end_n_top` end token possibilities
(beam-search).
end_top_index (`torch.LongTensor` of shape `(batch_size, config.start_n_top * config.end_n_top)`, *optional*, returned if `start_positions` or `end_positions` is not provided):
Indices for the top `config.start_n_top * config.end_n_top` end token possibilities (beam-search).
cls_logits (`torch.FloatTensor` of shape `(batch_size,)`, *optional*, returned if `start_positions` or `end_positions` is not provided):
Log probabilities for the `is_impossible` label of the answers.
"""
loss: Optional[torch.FloatTensor] = None
start_top_log_probs: Optional[torch.FloatTensor] = None
start_top_index: Optional[torch.LongTensor] = None
end_top_log_probs: Optional[torch.FloatTensor] = None
end_top_index: Optional[torch.LongTensor] = None
cls_logits: Optional[torch.FloatTensor] = None
class SQuADHead(nn.Module):
r"""
A SQuAD head inspired by XLNet.
Args:
config ([`PretrainedConfig`]):
The config used by the model, will be used to grab the `hidden_size` of the model and the `layer_norm_eps`
to use.
"""
def __init__(self, config):
super().__init__()
self.start_n_top = config.start_n_top
self.end_n_top = config.end_n_top
self.start_logits = PoolerStartLogits(config)
self.end_logits = PoolerEndLogits(config)
self.answer_class = PoolerAnswerClass(config)
@replace_return_docstrings(output_type=SquadHeadOutput, config_class=PretrainedConfig)
def forward(
self,
hidden_states: torch.FloatTensor,
start_positions: Optional[torch.LongTensor] = None,
end_positions: Optional[torch.LongTensor] = None,
cls_index: Optional[torch.LongTensor] = None,
is_impossible: Optional[torch.LongTensor] = None,
p_mask: Optional[torch.FloatTensor] = None,
return_dict: bool = False,
) -> Union[SquadHeadOutput, Tuple[torch.FloatTensor]]:
"""
Args:
hidden_states (`torch.FloatTensor` of shape `(batch_size, seq_len, hidden_size)`):
Final hidden states of the model on the sequence tokens.
start_positions (`torch.LongTensor` of shape `(batch_size,)`, *optional*):
Positions of the first token for the labeled span.
end_positions (`torch.LongTensor` of shape `(batch_size,)`, *optional*):
Positions of the last token for the labeled span.
cls_index (`torch.LongTensor` of shape `(batch_size,)`, *optional*):
Position of the CLS token for each sentence in the batch. If `None`, takes the last token.
is_impossible (`torch.LongTensor` of shape `(batch_size,)`, *optional*):
Whether the question has a possible answer in the paragraph or not.
p_mask (`torch.FloatTensor` of shape `(batch_size, seq_len)`, *optional*):
Mask for tokens at invalid position, such as query and special symbols (PAD, SEP, CLS). 1.0 means token
should be masked.
return_dict (`bool`, *optional*, defaults to `False`):
Whether or not to return a [`~file_utils.ModelOutput`] instead of a plain tuple.
Returns:
"""
start_logits = self.start_logits(hidden_states, p_mask=p_mask)
if start_positions is not None and end_positions is not None:
# If we are on multi-GPU, let's remove the dimension added by batch splitting
for x in (start_positions, end_positions, cls_index, is_impossible):
if x is not None and x.dim() > 1:
x.squeeze_(-1)
# during training, compute the end logits based on the ground truth of the start position
end_logits = self.end_logits(hidden_states, start_positions=start_positions, p_mask=p_mask)
loss_fct = CrossEntropyLoss()
start_loss = loss_fct(start_logits, start_positions)
end_loss = loss_fct(end_logits, end_positions)
total_loss = (start_loss + end_loss) / 2
if cls_index is not None and is_impossible is not None:
# Predict answerability from the representation of CLS and START
cls_logits = self.answer_class(hidden_states, start_positions=start_positions, cls_index=cls_index)
loss_fct_cls = nn.BCEWithLogitsLoss()
cls_loss = loss_fct_cls(cls_logits, is_impossible)
# note(zhiliny): by default multiply the loss by 0.5 so that the scale is comparable to start_loss and end_loss
total_loss += cls_loss * 0.5
return SquadHeadOutput(loss=total_loss) if return_dict else (total_loss,)
else:
# during inference, compute the end logits based on beam search
bsz, slen, hsz = hidden_states.size()
start_log_probs = nn.functional.softmax(start_logits, dim=-1) # shape (bsz, slen)
start_top_log_probs, start_top_index = torch.topk(
start_log_probs, self.start_n_top, dim=-1
) # shape (bsz, start_n_top)
start_top_index_exp = start_top_index.unsqueeze(-1).expand(-1, -1, hsz) # shape (bsz, start_n_top, hsz)
start_states = torch.gather(hidden_states, -2, start_top_index_exp) # shape (bsz, start_n_top, hsz)
start_states = start_states.unsqueeze(1).expand(-1, slen, -1, -1) # shape (bsz, slen, start_n_top, hsz)
hidden_states_expanded = hidden_states.unsqueeze(2).expand_as(
start_states
) # shape (bsz, slen, start_n_top, hsz)
p_mask = p_mask.unsqueeze(-1) if p_mask is not None else None
end_logits = self.end_logits(hidden_states_expanded, start_states=start_states, p_mask=p_mask)
end_log_probs = nn.functional.softmax(end_logits, dim=1) # shape (bsz, slen, start_n_top)
end_top_log_probs, end_top_index = torch.topk(
end_log_probs, self.end_n_top, dim=1
) # shape (bsz, end_n_top, start_n_top)
end_top_log_probs = end_top_log_probs.view(-1, self.start_n_top * self.end_n_top)
end_top_index = end_top_index.view(-1, self.start_n_top * self.end_n_top)
start_states = torch.einsum("blh,bl->bh", hidden_states, start_log_probs)
cls_logits = self.answer_class(hidden_states, start_states=start_states, cls_index=cls_index)
if not return_dict:
return (start_top_log_probs, start_top_index, end_top_log_probs, end_top_index, cls_logits)
else:
return SquadHeadOutput(
start_top_log_probs=start_top_log_probs,
start_top_index=start_top_index,
end_top_log_probs=end_top_log_probs,
end_top_index=end_top_index,
cls_logits=cls_logits,
)
class SequenceSummary(nn.Module):
r"""
Compute a single vector summary of a sequence hidden states.
Args:
config ([`PretrainedConfig`]):
The config used by the model. Relevant arguments in the config class of the model are (refer to the actual
config class of your model for the default values it uses):
- **summary_type** (`str`) -- The method to use to make this summary. Accepted values are:
- `"last"` -- Take the last token hidden state (like XLNet)
- `"first"` -- Take the first token hidden state (like Bert)
- `"mean"` -- Take the mean of all tokens hidden states
- `"cls_index"` -- Supply a Tensor of classification token position (GPT/GPT-2)
- `"attn"` -- Not implemented now, use multi-head attention
- **summary_use_proj** (`bool`) -- Add a projection after the vector extraction.
- **summary_proj_to_labels** (`bool`) -- If `True`, the projection outputs to `config.num_labels` classes
(otherwise to `config.hidden_size`).
- **summary_activation** (`Optional[str]`) -- Set to `"tanh"` to add a tanh activation to the output,
another string or `None` will add no activation.
- **summary_first_dropout** (`float`) -- Optional dropout probability before the projection and activation.
- **summary_last_dropout** (`float`)-- Optional dropout probability after the projection and activation.
"""
def __init__(self, config: PretrainedConfig):
super().__init__()
self.summary_type = getattr(config, "summary_type", "last")
if self.summary_type == "attn":
# We should use a standard multi-head attention module with absolute positional embedding for that.
# Cf. https://github.com/zihangdai/xlnet/blob/master/modeling.py#L253-L276
# We can probably just use the multi-head attention module of PyTorch >=1.1.0
raise NotImplementedError
self.summary = Identity()
if hasattr(config, "summary_use_proj") and config.summary_use_proj:
if hasattr(config, "summary_proj_to_labels") and config.summary_proj_to_labels and config.num_labels > 0:
num_classes = config.num_labels
else:
num_classes = config.hidden_size
self.summary = nn.Linear(config.hidden_size, num_classes)
activation_string = getattr(config, "summary_activation", None)
self.activation: Callable = get_activation(activation_string) if activation_string else Identity()
self.first_dropout = Identity()
if hasattr(config, "summary_first_dropout") and config.summary_first_dropout > 0:
self.first_dropout = nn.Dropout(config.summary_first_dropout)
self.last_dropout = Identity()
if hasattr(config, "summary_last_dropout") and config.summary_last_dropout > 0:
self.last_dropout = nn.Dropout(config.summary_last_dropout)
def forward(
self, hidden_states: torch.FloatTensor, cls_index: Optional[torch.LongTensor] = None
) -> torch.FloatTensor:
"""
Compute a single vector summary of a sequence hidden states.
Args:
hidden_states (`torch.FloatTensor` of shape `[batch_size, seq_len, hidden_size]`):
The hidden states of the last layer.
cls_index (`torch.LongTensor` of shape `[batch_size]` or `[batch_size, ...]` where ... are optional leading dimensions of `hidden_states`, *optional*):
Used if `summary_type == "cls_index"` and takes the last token of the sequence as classification token.
Returns:
`torch.FloatTensor`: The summary of the sequence hidden states.
"""
if self.summary_type == "last":
output = hidden_states[:, -1]
elif self.summary_type == "first":
output = hidden_states[:, 0]
elif self.summary_type == "mean":
output = hidden_states.mean(dim=1)
elif self.summary_type == "cls_index":
if cls_index is None:
cls_index = torch.full_like(
hidden_states[..., :1, :],
hidden_states.shape[-2] - 1,
dtype=torch.long,
)
else:
cls_index = cls_index.unsqueeze(-1).unsqueeze(-1)
cls_index = cls_index.expand((-1,) * (cls_index.dim() - 1) + (hidden_states.size(-1),))
# shape of cls_index: (bsz, XX, 1, hidden_size) where XX are optional leading dim of hidden_states
output = hidden_states.gather(-2, cls_index).squeeze(-2) # shape (bsz, XX, hidden_size)
elif self.summary_type == "attn":
raise NotImplementedError
output = self.first_dropout(output)
output = self.summary(output)
output = self.activation(output)
output = self.last_dropout(output)
return output
def unwrap_model(model: nn.Module) -> nn.Module:
"""
Recursively unwraps a model from potential containers (as used in distributed training).
Args:
model (`torch.nn.Module`): The model to unwrap.
"""
# since there could be multiple levels of wrapping, unwrap recursively
if hasattr(model, "module"):
return unwrap_model(model.module)
else:
return model
def prune_linear_layer(layer: nn.Linear, index: torch.LongTensor, dim: int = 0) -> nn.Linear:
"""
Prune a linear layer to keep only entries in index.
Used to remove heads.
Args:
layer (`torch.nn.Linear`): The layer to prune.
index (`torch.LongTensor`): The indices to keep in the layer.
dim (`int`, *optional*, defaults to 0): The dimension on which to keep the indices.
Returns:
`torch.nn.Linear`: The pruned layer as a new layer with `requires_grad=True`.
"""
index = index.to(layer.weight.device)
W = layer.weight.index_select(dim, index).clone().detach()
if layer.bias is not None:
if dim == 1:
b = layer.bias.clone().detach()
else:
b = layer.bias[index].clone().detach()
new_size = list(layer.weight.size())
new_size[dim] = len(index)
new_layer = nn.Linear(new_size[1], new_size[0], bias=layer.bias is not None).to(layer.weight.device)
new_layer.weight.requires_grad = False
new_layer.weight.copy_(W.contiguous())
new_layer.weight.requires_grad = True
if layer.bias is not None:
new_layer.bias.requires_grad = False
new_layer.bias.copy_(b.contiguous())
new_layer.bias.requires_grad = True
return new_layer
def prune_conv1d_layer(layer: Conv1D, index: torch.LongTensor, dim: int = 1) -> Conv1D:
"""
Prune a Conv1D layer to keep only entries in index. A Conv1D work as a Linear layer (see e.g. BERT) but the weights
are transposed.
Used to remove heads.
Args:
layer ([`~modeling_utils.Conv1D`]): The layer to prune.
index (`torch.LongTensor`): The indices to keep in the layer.
dim (`int`, *optional*, defaults to 1): The dimension on which to keep the indices.
Returns:
[`~modeling_utils.Conv1D`]: The pruned layer as a new layer with `requires_grad=True`.
"""
index = index.to(layer.weight.device)
W = layer.weight.index_select(dim, index).clone().detach()
if dim == 0:
b = layer.bias.clone().detach()
else:
b = layer.bias[index].clone().detach()
new_size = list(layer.weight.size())
new_size[dim] = len(index)
new_layer = Conv1D(new_size[1], new_size[0]).to(layer.weight.device)
new_layer.weight.requires_grad = False
new_layer.weight.copy_(W.contiguous())
new_layer.weight.requires_grad = True
new_layer.bias.requires_grad = False
new_layer.bias.copy_(b.contiguous())
new_layer.bias.requires_grad = True
return new_layer
def prune_layer(
layer: Union[nn.Linear, Conv1D], index: torch.LongTensor, dim: Optional[int] = None
) -> Union[nn.Linear, Conv1D]:
"""
Prune a Conv1D or linear layer to keep only entries in index.
Used to remove heads.
Args:
layer (`Union[torch.nn.Linear, Conv1D]`): The layer to prune.
index (`torch.LongTensor`): The indices to keep in the layer.
dim (`int`, *optional*): The dimension on which to keep the indices.
Returns:
`torch.nn.Linear` or [`~modeling_utils.Conv1D`]: The pruned layer as a new layer with `requires_grad=True`.
"""
if isinstance(layer, nn.Linear):
return prune_linear_layer(layer, index, dim=0 if dim is None else dim)
elif isinstance(layer, Conv1D):
return prune_conv1d_layer(layer, index, dim=1 if dim is None else dim)
else:
raise ValueError(f"Can't prune layer of class {layer.__class__}")
def apply_chunking_to_forward(
forward_fn: Callable[..., torch.Tensor], chunk_size: int, chunk_dim: int, *input_tensors
) -> torch.Tensor:
"""
This function chunks the `input_tensors` into smaller input tensor parts of size `chunk_size` over the dimension
`chunk_dim`. It then applies a layer `forward_fn` to each chunk independently to save memory.
If the `forward_fn` is independent across the `chunk_dim` this function will yield the same result as directly
applying `forward_fn` to `input_tensors`.
Args:
forward_fn (`Callable[..., torch.Tensor]`):
The forward function of the model.
chunk_size (`int`):
The chunk size of a chunked tensor: `num_chunks = len(input_tensors[0]) / chunk_size`.
chunk_dim (`int`):
The dimension over which the `input_tensors` should be chunked.
input_tensors (`Tuple[torch.Tensor]`):
The input tensors of `forward_fn` which will be chunked
Returns:
`torch.Tensor`: A tensor with the same shape as the `forward_fn` would have given if applied`.
Examples:
```python
# rename the usual forward() fn to forward_chunk()
def forward_chunk(self, hidden_states):
hidden_states = self.decoder(hidden_states)
return hidden_states
# implement a chunked forward function
def forward(self, hidden_states):
return apply_chunking_to_forward(self.forward_chunk, self.chunk_size_lm_head, self.seq_len_dim, hidden_states)
```"""
assert len(input_tensors) > 0, f"{input_tensors} has to be a tuple/list of tensors"
# inspect.signature exist since python 3.5 and is a python method -> no problem with backward compatibility
num_args_in_forward_chunk_fn = len(inspect.signature(forward_fn).parameters)
if num_args_in_forward_chunk_fn != len(input_tensors):
raise ValueError(
f"forward_chunk_fn expects {num_args_in_forward_chunk_fn} arguments, but only {len(input_tensors)} input "
"tensors are given"
)
if chunk_size > 0:
tensor_shape = input_tensors[0].shape[chunk_dim]
for input_tensor in input_tensors:
if input_tensor.shape[chunk_dim] != tensor_shape:
raise ValueError(
f"All input tenors have to be of the same shape: {tensor_shape}, "
f"found shape {input_tensor.shape[chunk_dim]}"
)
if input_tensors[0].shape[chunk_dim] % chunk_size != 0:
raise ValueError(
f"The dimension to be chunked {input_tensors[0].shape[chunk_dim]} has to be a multiple of the chunk "
f"size {chunk_size}"
)
num_chunks = input_tensors[0].shape[chunk_dim] // chunk_size
# chunk input tensor into tuples
input_tensors_chunks = tuple(input_tensor.chunk(num_chunks, dim=chunk_dim) for input_tensor in input_tensors)
# apply forward fn to every tuple
output_chunks = tuple(forward_fn(*input_tensors_chunk) for input_tensors_chunk in zip(*input_tensors_chunks))
# concatenate output at same dimension
return torch.cat(output_chunks, dim=chunk_dim)
return forward_fn(*input_tensors)
| 117,993 | 46.712899 | 189 | py |
robust-transformers | robust-transformers-main/src/transformers/testing_utils.py | # Copyright 2020 The HuggingFace Team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
import contextlib
import inspect
import logging
import os
import re
import shutil
import sys
import tempfile
import unittest
from distutils.util import strtobool
from io import StringIO
from pathlib import Path
from typing import Iterator, Union
from unittest import mock
from transformers import logging as transformers_logging
from .deepspeed import is_deepspeed_available
from .file_utils import (
is_detectron2_available,
is_faiss_available,
is_flax_available,
is_ftfy_available,
is_librosa_available,
is_onnx_available,
is_pandas_available,
is_phonemizer_available,
is_pyctcdecode_available,
is_pytesseract_available,
is_pytorch_quantization_available,
is_rjieba_available,
is_scatter_available,
is_sentencepiece_available,
is_soundfile_availble,
is_spacy_available,
is_tensorflow_probability_available,
is_tf2onnx_available,
is_tf_available,
is_timm_available,
is_tokenizers_available,
is_torch_available,
is_torch_bf16_available,
is_torch_tf32_available,
is_torch_tpu_available,
is_torchaudio_available,
is_vision_available,
)
from .integrations import is_optuna_available, is_ray_available, is_sigopt_available, is_wandb_available
SMALL_MODEL_IDENTIFIER = "julien-c/bert-xsmall-dummy"
DUMMY_UNKNOWN_IDENTIFIER = "julien-c/dummy-unknown"
DUMMY_DIFF_TOKENIZER_IDENTIFIER = "julien-c/dummy-diff-tokenizer"
# Used to test Auto{Config, Model, Tokenizer} model_type detection.
# Used to test the hub
USER = "__DUMMY_TRANSFORMERS_USER__"
PASS = "__DUMMY_TRANSFORMERS_PASS__"
ENDPOINT_STAGING = "https://moon-staging.huggingface.co"
def parse_flag_from_env(key, default=False):
try:
value = os.environ[key]
except KeyError:
# KEY isn't set, default to `default`.
_value = default
else:
# KEY is set, convert it to True or False.
try:
_value = strtobool(value)
except ValueError:
# More values are supported, but let's keep the message simple.
raise ValueError(f"If set, {key} must be yes or no.")
return _value
def parse_int_from_env(key, default=None):
try:
value = os.environ[key]
except KeyError:
_value = default
else:
try:
_value = int(value)
except ValueError:
raise ValueError(f"If set, {key} must be a int.")
return _value
_run_slow_tests = parse_flag_from_env("RUN_SLOW", default=False)
_run_pt_tf_cross_tests = parse_flag_from_env("RUN_PT_TF_CROSS_TESTS", default=False)
_run_pt_flax_cross_tests = parse_flag_from_env("RUN_PT_FLAX_CROSS_TESTS", default=False)
_run_custom_tokenizers = parse_flag_from_env("RUN_CUSTOM_TOKENIZERS", default=False)
_run_staging = parse_flag_from_env("HUGGINGFACE_CO_STAGING", default=False)
_run_pipeline_tests = parse_flag_from_env("RUN_PIPELINE_TESTS", default=False)
_run_git_lfs_tests = parse_flag_from_env("RUN_GIT_LFS_TESTS", default=False)
_tf_gpu_memory_limit = parse_int_from_env("TF_GPU_MEMORY_LIMIT", default=None)
def is_pt_tf_cross_test(test_case):
"""
Decorator marking a test as a test that control interactions between PyTorch and TensorFlow.
PT+TF tests are skipped by default and we can run only them by setting RUN_PT_TF_CROSS_TESTS environment variable
to a truthy value and selecting the is_pt_tf_cross_test pytest mark.
"""
if not _run_pt_tf_cross_tests or not is_torch_available() or not is_tf_available():
return unittest.skip("test is PT+TF test")(test_case)
else:
try:
import pytest # We don't need a hard dependency on pytest in the main library
except ImportError:
return test_case
else:
return pytest.mark.is_pt_tf_cross_test()(test_case)
def is_pt_flax_cross_test(test_case):
"""
Decorator marking a test as a test that control interactions between PyTorch and Flax
PT+FLAX tests are skipped by default and we can run only them by setting RUN_PT_FLAX_CROSS_TESTS environment
variable to a truthy value and selecting the is_pt_flax_cross_test pytest mark.
"""
if not _run_pt_flax_cross_tests or not is_torch_available() or not is_flax_available():
return unittest.skip("test is PT+FLAX test")(test_case)
else:
try:
import pytest # We don't need a hard dependency on pytest in the main library
except ImportError:
return test_case
else:
return pytest.mark.is_pt_flax_cross_test()(test_case)
def is_pipeline_test(test_case):
"""
Decorator marking a test as a pipeline test.
Pipeline tests are skipped by default and we can run only them by setting RUN_PIPELINE_TESTS environment variable
to a truthy value and selecting the is_pipeline_test pytest mark.
"""
if not _run_pipeline_tests:
return unittest.skip("test is pipeline test")(test_case)
else:
try:
import pytest # We don't need a hard dependency on pytest in the main library
except ImportError:
return test_case
else:
return pytest.mark.is_pipeline_test()(test_case)
def is_staging_test(test_case):
"""
Decorator marking a test as a staging test.
Those tests will run using the staging environment of huggingface.co instead of the real model hub.
"""
if not _run_staging:
return unittest.skip("test is staging test")(test_case)
else:
try:
import pytest # We don't need a hard dependency on pytest in the main library
except ImportError:
return test_case
else:
return pytest.mark.is_staging_test()(test_case)
def slow(test_case):
"""
Decorator marking a test as slow.
Slow tests are skipped by default. Set the RUN_SLOW environment variable to a truthy value to run them.
"""
if not _run_slow_tests:
return unittest.skip("test is slow")(test_case)
else:
return test_case
def tooslow(test_case):
"""
Decorator marking a test as too slow.
Slow tests are skipped while they're in the process of being fixed. No test should stay tagged as "tooslow" as
these will not be tested by the CI.
"""
return unittest.skip("test is too slow")(test_case)
def custom_tokenizers(test_case):
"""
Decorator marking a test for a custom tokenizer.
Custom tokenizers require additional dependencies, and are skipped by default. Set the RUN_CUSTOM_TOKENIZERS
environment variable to a truthy value to run them.
"""
if not _run_custom_tokenizers:
return unittest.skip("test of custom tokenizers")(test_case)
else:
return test_case
def require_git_lfs(test_case):
"""
Decorator marking a test that requires git-lfs.
git-lfs requires additional dependencies, and tests are skipped by default. Set the RUN_GIT_LFS_TESTS environment
variable to a truthy value to run them.
"""
if not _run_git_lfs_tests:
return unittest.skip("test of git lfs workflow")(test_case)
else:
return test_case
def require_rjieba(test_case):
"""
Decorator marking a test that requires rjieba. These tests are skipped when rjieba isn't installed.
"""
if not is_rjieba_available():
return unittest.skip("test requires rjieba")(test_case)
else:
return test_case
def require_tf2onnx(test_case):
if not is_tf2onnx_available():
return unittest.skip("test requires tf2onnx")(test_case)
else:
return test_case
def require_onnx(test_case):
if not is_onnx_available():
return unittest.skip("test requires ONNX")(test_case)
else:
return test_case
def require_timm(test_case):
"""
Decorator marking a test that requires Timm.
These tests are skipped when Timm isn't installed.
"""
if not is_timm_available():
return unittest.skip("test requires Timm")(test_case)
else:
return test_case
def require_torch(test_case):
"""
Decorator marking a test that requires PyTorch.
These tests are skipped when PyTorch isn't installed.
"""
if not is_torch_available():
return unittest.skip("test requires PyTorch")(test_case)
else:
return test_case
def require_torch_scatter(test_case):
"""
Decorator marking a test that requires PyTorch scatter.
These tests are skipped when PyTorch scatter isn't installed.
"""
if not is_scatter_available():
return unittest.skip("test requires PyTorch scatter")(test_case)
else:
return test_case
def require_tensorflow_probability(test_case):
"""
Decorator marking a test that requires TensorFlow probability.
These tests are skipped when TensorFlow probability isn't installed.
"""
if not is_tensorflow_probability_available():
return unittest.skip("test requires TensorFlow probability")(test_case)
else:
return test_case
def require_torchaudio(test_case):
"""
Decorator marking a test that requires torchaudio. These tests are skipped when torchaudio isn't installed.
"""
if not is_torchaudio_available():
return unittest.skip("test requires torchaudio")(test_case)
else:
return test_case
def require_tf(test_case):
"""
Decorator marking a test that requires TensorFlow. These tests are skipped when TensorFlow isn't installed.
"""
if not is_tf_available():
return unittest.skip("test requires TensorFlow")(test_case)
else:
return test_case
def require_flax(test_case):
"""
Decorator marking a test that requires JAX & Flax. These tests are skipped when one / both are not installed
"""
if not is_flax_available():
test_case = unittest.skip("test requires JAX & Flax")(test_case)
return test_case
def require_sentencepiece(test_case):
"""
Decorator marking a test that requires SentencePiece. These tests are skipped when SentencePiece isn't installed.
"""
if not is_sentencepiece_available():
return unittest.skip("test requires SentencePiece")(test_case)
else:
return test_case
def require_tokenizers(test_case):
"""
Decorator marking a test that requires 🤗 Tokenizers. These tests are skipped when 🤗 Tokenizers isn't installed.
"""
if not is_tokenizers_available():
return unittest.skip("test requires tokenizers")(test_case)
else:
return test_case
def require_pandas(test_case):
"""
Decorator marking a test that requires pandas. These tests are skipped when pandas isn't installed.
"""
if not is_pandas_available():
return unittest.skip("test requires pandas")(test_case)
else:
return test_case
def require_pytesseract(test_case):
"""
Decorator marking a test that requires PyTesseract. These tests are skipped when PyTesseract isn't installed.
"""
if not is_pytesseract_available():
return unittest.skip("test requires PyTesseract")(test_case)
else:
return test_case
def require_scatter(test_case):
"""
Decorator marking a test that requires PyTorch Scatter. These tests are skipped when PyTorch Scatter isn't
installed.
"""
if not is_scatter_available():
return unittest.skip("test requires PyTorch Scatter")(test_case)
else:
return test_case
def require_pytorch_quantization(test_case):
"""
Decorator marking a test that requires PyTorch Quantization Toolkit. These tests are skipped when PyTorch
Quantization Toolkit isn't installed.
"""
if not is_pytorch_quantization_available():
return unittest.skip("test requires PyTorch Quantization Toolkit")(test_case)
else:
return test_case
def require_vision(test_case):
"""
Decorator marking a test that requires the vision dependencies. These tests are skipped when torchaudio isn't
installed.
"""
if not is_vision_available():
return unittest.skip("test requires vision")(test_case)
else:
return test_case
def require_ftfy(test_case):
"""
Decorator marking a test that requires ftfy. These tests are skipped when ftfy isn't installed.
"""
if not is_ftfy_available():
return unittest.skip("test requires ftfy")(test_case)
else:
return test_case
def require_spacy(test_case):
"""
Decorator marking a test that requires SpaCy. These tests are skipped when SpaCy isn't installed.
"""
if not is_spacy_available():
return unittest.skip("test requires spacy")(test_case)
else:
return test_case
def require_torch_multi_gpu(test_case):
"""
Decorator marking a test that requires a multi-GPU setup (in PyTorch). These tests are skipped on a machine without
multiple GPUs.
To run *only* the multi_gpu tests, assuming all test names contain multi_gpu: $ pytest -sv ./tests -k "multi_gpu"
"""
if not is_torch_available():
return unittest.skip("test requires PyTorch")(test_case)
import torch
if torch.cuda.device_count() < 2:
return unittest.skip("test requires multiple GPUs")(test_case)
else:
return test_case
def require_torch_non_multi_gpu(test_case):
"""
Decorator marking a test that requires 0 or 1 GPU setup (in PyTorch).
"""
if not is_torch_available():
return unittest.skip("test requires PyTorch")(test_case)
import torch
if torch.cuda.device_count() > 1:
return unittest.skip("test requires 0 or 1 GPU")(test_case)
else:
return test_case
def require_torch_up_to_2_gpus(test_case):
"""
Decorator marking a test that requires 0 or 1 or 2 GPU setup (in PyTorch).
"""
if not is_torch_available():
return unittest.skip("test requires PyTorch")(test_case)
import torch
if torch.cuda.device_count() > 2:
return unittest.skip("test requires 0 or 1 or 2 GPUs")(test_case)
else:
return test_case
def require_torch_tpu(test_case):
"""
Decorator marking a test that requires a TPU (in PyTorch).
"""
if not is_torch_tpu_available():
return unittest.skip("test requires PyTorch TPU")
else:
return test_case
if is_torch_available():
# Set env var CUDA_VISIBLE_DEVICES="" to force cpu-mode
import torch
torch_device = "cuda" if torch.cuda.is_available() else "cpu"
else:
torch_device = None
if is_tf_available():
import tensorflow as tf
if is_flax_available():
import jax
jax_device = jax.default_backend()
else:
jax_device = None
def require_torch_gpu(test_case):
"""Decorator marking a test that requires CUDA and PyTorch."""
if torch_device != "cuda":
return unittest.skip("test requires CUDA")(test_case)
else:
return test_case
def require_torch_bf16(test_case):
"""Decorator marking a test that requires Ampere or a newer GPU arch, cuda>=11 and torch>=1.10."""
if not is_torch_bf16_available():
return unittest.skip("test requires Ampere or a newer GPU arch, cuda>=11 and torch>=1.10")(test_case)
else:
return test_case
def require_torch_tf32(test_case):
"""Decorator marking a test that requires Ampere or a newer GPU arch, cuda>=11 and torch>=1.7."""
if not is_torch_tf32_available():
return unittest.skip("test requires Ampere or a newer GPU arch, cuda>=11 and torch>=1.7")(test_case)
else:
return test_case
def require_detectron2(test_case):
"""Decorator marking a test that requires detectron2."""
if not is_detectron2_available():
return unittest.skip("test requires `detectron2`")(test_case)
else:
return test_case
def require_faiss(test_case):
"""Decorator marking a test that requires faiss."""
if not is_faiss_available():
return unittest.skip("test requires `faiss`")(test_case)
else:
return test_case
def require_optuna(test_case):
"""
Decorator marking a test that requires optuna.
These tests are skipped when optuna isn't installed.
"""
if not is_optuna_available():
return unittest.skip("test requires optuna")(test_case)
else:
return test_case
def require_ray(test_case):
"""
Decorator marking a test that requires Ray/tune.
These tests are skipped when Ray/tune isn't installed.
"""
if not is_ray_available():
return unittest.skip("test requires Ray/tune")(test_case)
else:
return test_case
def require_sigopt(test_case):
"""
Decorator marking a test that requires SigOpt.
These tests are skipped when SigOpt isn't installed.
"""
if not is_sigopt_available():
return unittest.skip("test requires SigOpt")(test_case)
else:
return test_case
def require_wandb(test_case):
"""
Decorator marking a test that requires wandb.
These tests are skipped when wandb isn't installed.
"""
if not is_wandb_available():
return unittest.skip("test requires wandb")(test_case)
else:
return test_case
def require_soundfile(test_case):
"""
Decorator marking a test that requires soundfile
These tests are skipped when soundfile isn't installed.
"""
if not is_soundfile_availble():
return unittest.skip("test requires soundfile")(test_case)
else:
return test_case
def require_deepspeed(test_case):
"""
Decorator marking a test that requires deepspeed
"""
if not is_deepspeed_available():
return unittest.skip("test requires deepspeed")(test_case)
else:
return test_case
def require_phonemizer(test_case):
"""
Decorator marking a test that requires phonemizer
"""
if not is_phonemizer_available():
return unittest.skip("test requires phonemizer")(test_case)
else:
return test_case
def require_pyctcdecode(test_case):
"""
Decorator marking a test that requires pyctcdecode
"""
if not is_pyctcdecode_available():
return unittest.skip("test requires pyctcdecode")(test_case)
else:
return test_case
def require_librosa(test_case):
"""
Decorator marking a test that requires librosa
"""
if not is_librosa_available():
return unittest.skip("test requires librosa")(test_case)
else:
return test_case
def get_gpu_count():
"""
Return the number of available gpus (regardless of whether torch, tf or jax is used)
"""
if is_torch_available():
import torch
return torch.cuda.device_count()
elif is_tf_available():
import tensorflow as tf
return len(tf.config.list_physical_devices("GPU"))
elif is_flax_available():
import jax
return jax.device_count()
else:
return 0
def get_tests_dir(append_path=None):
"""
Args:
append_path: optional path to append to the tests dir path
Return:
The full path to the `tests` dir, so that the tests can be invoked from anywhere. Optionally `append_path` is
joined after the `tests` dir the former is provided.
"""
# this function caller's __file__
caller__file__ = inspect.stack()[1][1]
tests_dir = os.path.abspath(os.path.dirname(caller__file__))
while not tests_dir.endswith("tests"):
tests_dir = os.path.dirname(tests_dir)
if append_path:
return os.path.join(tests_dir, append_path)
else:
return tests_dir
#
# Helper functions for dealing with testing text outputs
# The original code came from:
# https://github.com/fastai/fastai/blob/master/tests/utils/text.py
# When any function contains print() calls that get overwritten, like progress bars,
# a special care needs to be applied, since under pytest -s captured output (capsys
# or contextlib.redirect_stdout) contains any temporary printed strings, followed by
# \r's. This helper function ensures that the buffer will contain the same output
# with and without -s in pytest, by turning:
# foo bar\r tar mar\r final message
# into:
# final message
# it can handle a single string or a multiline buffer
def apply_print_resets(buf):
return re.sub(r"^.*\r", "", buf, 0, re.M)
def assert_screenout(out, what):
out_pr = apply_print_resets(out).lower()
match_str = out_pr.find(what.lower())
assert match_str != -1, f"expecting to find {what} in output: f{out_pr}"
class CaptureStd:
"""
Context manager to capture:
- stdout: replay it, clean it up and make it available via `obj.out`
- stderr: replay it and make it available via `obj.err`
Args:
out (`bool`, *optional*, defaults to `True`): Whether to capture stdout or not.
err (`bool`, *optional*, defaults to `True`): Whether to capture stderr or not.
replay (`bool`, *optional*, defaults to `True`): Whether to replay or not.
By default each captured stream gets replayed back on context's exit, so that one can see what the test was
doing. If this is a not wanted behavior and the captured data shouldn't be replayed, pass `replay=False` to
disable this feature.
Examples:
```python
# to capture stdout only with auto-replay
with CaptureStdout() as cs:
print("Secret message")
assert "message" in cs.out
# to capture stderr only with auto-replay
import sys
with CaptureStderr() as cs:
print("Warning: ", file=sys.stderr)
assert "Warning" in cs.err
# to capture both streams with auto-replay
with CaptureStd() as cs:
print("Secret message")
print("Warning: ", file=sys.stderr)
assert "message" in cs.out
assert "Warning" in cs.err
# to capture just one of the streams, and not the other, with auto-replay
with CaptureStd(err=False) as cs:
print("Secret message")
assert "message" in cs.out
# but best use the stream-specific subclasses
# to capture without auto-replay
with CaptureStd(replay=False) as cs:
print("Secret message")
assert "message" in cs.out
```"""
def __init__(self, out=True, err=True, replay=True):
self.replay = replay
if out:
self.out_buf = StringIO()
self.out = "error: CaptureStd context is unfinished yet, called too early"
else:
self.out_buf = None
self.out = "not capturing stdout"
if err:
self.err_buf = StringIO()
self.err = "error: CaptureStd context is unfinished yet, called too early"
else:
self.err_buf = None
self.err = "not capturing stderr"
def __enter__(self):
if self.out_buf:
self.out_old = sys.stdout
sys.stdout = self.out_buf
if self.err_buf:
self.err_old = sys.stderr
sys.stderr = self.err_buf
return self
def __exit__(self, *exc):
if self.out_buf:
sys.stdout = self.out_old
captured = self.out_buf.getvalue()
if self.replay:
sys.stdout.write(captured)
self.out = apply_print_resets(captured)
if self.err_buf:
sys.stderr = self.err_old
captured = self.err_buf.getvalue()
if self.replay:
sys.stderr.write(captured)
self.err = captured
def __repr__(self):
msg = ""
if self.out_buf:
msg += f"stdout: {self.out}\n"
if self.err_buf:
msg += f"stderr: {self.err}\n"
return msg
# in tests it's the best to capture only the stream that's wanted, otherwise
# it's easy to miss things, so unless you need to capture both streams, use the
# subclasses below (less typing). Or alternatively, configure `CaptureStd` to
# disable the stream you don't need to test.
class CaptureStdout(CaptureStd):
"""Same as CaptureStd but captures only stdout"""
def __init__(self, replay=True):
super().__init__(err=False, replay=replay)
class CaptureStderr(CaptureStd):
"""Same as CaptureStd but captures only stderr"""
def __init__(self, replay=True):
super().__init__(out=False, replay=replay)
class CaptureLogger:
"""
Context manager to capture `logging` streams
Args:
logger: 'logging` logger object
Returns:
The captured output is available via `self.out`
Example:
```python
>>> from transformers import logging
>>> from transformers.testing_utils import CaptureLogger
>>> msg = "Testing 1, 2, 3"
>>> logging.set_verbosity_info()
>>> logger = logging.get_logger("transformers.models.bart.tokenization_bart")
>>> with CaptureLogger(logger) as cl:
... logger.info(msg)
>>> assert cl.out, msg + "\n"
```
"""
def __init__(self, logger):
self.logger = logger
self.io = StringIO()
self.sh = logging.StreamHandler(self.io)
self.out = ""
def __enter__(self):
self.logger.addHandler(self.sh)
return self
def __exit__(self, *exc):
self.logger.removeHandler(self.sh)
self.out = self.io.getvalue()
def __repr__(self):
return f"captured: {self.out}\n"
@contextlib.contextmanager
def LoggingLevel(level):
"""
This is a context manager to temporarily change transformers modules logging level to the desired value and have it
restored to the original setting at the end of the scope.
Example:
```python
with LoggingLevel(logging.INFO):
AutoModel.from_pretrained("gpt2") # calls logger.info() several times
```
"""
orig_level = transformers_logging.get_verbosity()
try:
transformers_logging.set_verbosity(level)
yield
finally:
transformers_logging.set_verbosity(orig_level)
@contextlib.contextmanager
# adapted from https://stackoverflow.com/a/64789046/9201239
def ExtendSysPath(path: Union[str, os.PathLike]) -> Iterator[None]:
"""
Temporary add given path to `sys.path`.
Usage :
```python
with ExtendSysPath("/path/to/dir"):
mymodule = importlib.import_module("mymodule")
```
"""
path = os.fspath(path)
try:
sys.path.insert(0, path)
yield
finally:
sys.path.remove(path)
class TestCasePlus(unittest.TestCase):
"""
This class extends *unittest.TestCase* with additional features.
Feature 1: A set of fully resolved important file and dir path accessors.
In tests often we need to know where things are relative to the current test file, and it's not trivial since the
test could be invoked from more than one directory or could reside in sub-directories with different depths. This
class solves this problem by sorting out all the basic paths and provides easy accessors to them:
- `pathlib` objects (all fully resolved):
- `test_file_path` - the current test file path (=`__file__`)
- `test_file_dir` - the directory containing the current test file
- `tests_dir` - the directory of the `tests` test suite
- `examples_dir` - the directory of the `examples` test suite
- `repo_root_dir` - the directory of the repository
- `src_dir` - the directory of `src` (i.e. where the `transformers` sub-dir resides)
- stringified paths---same as above but these return paths as strings, rather than `pathlib` objects:
- `test_file_path_str`
- `test_file_dir_str`
- `tests_dir_str`
- `examples_dir_str`
- `repo_root_dir_str`
- `src_dir_str`
Feature 2: Flexible auto-removable temporary dirs which are guaranteed to get removed at the end of test.
1. Create a unique temporary dir:
```python
def test_whatever(self):
tmp_dir = self.get_auto_remove_tmp_dir()
```
`tmp_dir` will contain the path to the created temporary dir. It will be automatically removed at the end of the
test.
2. Create a temporary dir of my choice, ensure it's empty before the test starts and don't
empty it after the test.
```python
def test_whatever(self):
tmp_dir = self.get_auto_remove_tmp_dir("./xxx")
```
This is useful for debug when you want to monitor a specific directory and want to make sure the previous tests
didn't leave any data in there.
3. You can override the first two options by directly overriding the `before` and `after` args, leading to the
following behavior:
`before=True`: the temporary dir will always be cleared at the beginning of the test.
`before=False`: if the temporary dir already existed, any existing files will remain there.
`after=True`: the temporary dir will always be deleted at the end of the test.
`after=False`: the temporary dir will always be left intact at the end of the test.
Note 1: In order to run the equivalent of `rm -r` safely, only subdirs of the project repository checkout are
allowed if an explicit `tmp_dir` is used, so that by mistake no `/tmp` or similar important part of the filesystem
will get nuked. i.e. please always pass paths that start with `./`
Note 2: Each test can register multiple temporary dirs and they all will get auto-removed, unless requested
otherwise.
Feature 3: Get a copy of the `os.environ` object that sets up `PYTHONPATH` specific to the current test suite. This
is useful for invoking external programs from the test suite - e.g. distributed training.
```python
def test_whatever(self):
env = self.get_env()
```"""
def setUp(self):
# get_auto_remove_tmp_dir feature:
self.teardown_tmp_dirs = []
# figure out the resolved paths for repo_root, tests, examples, etc.
self._test_file_path = inspect.getfile(self.__class__)
path = Path(self._test_file_path).resolve()
self._test_file_dir = path.parents[0]
for up in [1, 2, 3]:
tmp_dir = path.parents[up]
if (tmp_dir / "src").is_dir() and (tmp_dir / "tests").is_dir():
break
if tmp_dir:
self._repo_root_dir = tmp_dir
else:
raise ValueError(f"can't figure out the root of the repo from {self._test_file_path}")
self._tests_dir = self._repo_root_dir / "tests"
self._examples_dir = self._repo_root_dir / "examples"
self._src_dir = self._repo_root_dir / "src"
@property
def test_file_path(self):
return self._test_file_path
@property
def test_file_path_str(self):
return str(self._test_file_path)
@property
def test_file_dir(self):
return self._test_file_dir
@property
def test_file_dir_str(self):
return str(self._test_file_dir)
@property
def tests_dir(self):
return self._tests_dir
@property
def tests_dir_str(self):
return str(self._tests_dir)
@property
def examples_dir(self):
return self._examples_dir
@property
def examples_dir_str(self):
return str(self._examples_dir)
@property
def repo_root_dir(self):
return self._repo_root_dir
@property
def repo_root_dir_str(self):
return str(self._repo_root_dir)
@property
def src_dir(self):
return self._src_dir
@property
def src_dir_str(self):
return str(self._src_dir)
def get_env(self):
"""
Return a copy of the `os.environ` object that sets up `PYTHONPATH` correctly, depending on the test suite it's
invoked from. This is useful for invoking external programs from the test suite - e.g. distributed training.
It always inserts `./src` first, then `./tests` or `./examples` depending on the test suite type and finally
the preset `PYTHONPATH` if any (all full resolved paths).
"""
env = os.environ.copy()
paths = [self.src_dir_str]
if "/examples" in self.test_file_dir_str:
paths.append(self.examples_dir_str)
else:
paths.append(self.tests_dir_str)
paths.append(env.get("PYTHONPATH", ""))
env["PYTHONPATH"] = ":".join(paths)
return env
def get_auto_remove_tmp_dir(self, tmp_dir=None, before=None, after=None):
"""
Args:
tmp_dir (`string`, *optional*):
if `None`:
- a unique temporary path will be created
- sets `before=True` if `before` is `None`
- sets `after=True` if `after` is `None`
else:
- `tmp_dir` will be created
- sets `before=True` if `before` is `None`
- sets `after=False` if `after` is `None`
before (`bool`, *optional*):
If `True` and the `tmp_dir` already exists, make sure to empty it right away if `False` and the
`tmp_dir` already exists, any existing files will remain there.
after (`bool`, *optional*):
If `True`, delete the `tmp_dir` at the end of the test if `False`, leave the `tmp_dir` and its contents
intact at the end of the test.
Returns:
tmp_dir(`string`): either the same value as passed via *tmp_dir* or the path to the auto-selected tmp dir
"""
if tmp_dir is not None:
# defining the most likely desired behavior for when a custom path is provided.
# this most likely indicates the debug mode where we want an easily locatable dir that:
# 1. gets cleared out before the test (if it already exists)
# 2. is left intact after the test
if before is None:
before = True
if after is None:
after = False
# using provided path
path = Path(tmp_dir).resolve()
# to avoid nuking parts of the filesystem, only relative paths are allowed
if not tmp_dir.startswith("./"):
raise ValueError(
f"`tmp_dir` can only be a relative path, i.e. `./some/path`, but received `{tmp_dir}`"
)
# ensure the dir is empty to start with
if before is True and path.exists():
shutil.rmtree(tmp_dir, ignore_errors=True)
path.mkdir(parents=True, exist_ok=True)
else:
# defining the most likely desired behavior for when a unique tmp path is auto generated
# (not a debug mode), here we require a unique tmp dir that:
# 1. is empty before the test (it will be empty in this situation anyway)
# 2. gets fully removed after the test
if before is None:
before = True
if after is None:
after = True
# using unique tmp dir (always empty, regardless of `before`)
tmp_dir = tempfile.mkdtemp()
if after is True:
# register for deletion
self.teardown_tmp_dirs.append(tmp_dir)
return tmp_dir
def tearDown(self):
# get_auto_remove_tmp_dir feature: remove registered temp dirs
for path in self.teardown_tmp_dirs:
shutil.rmtree(path, ignore_errors=True)
self.teardown_tmp_dirs = []
def mockenv(**kwargs):
"""
this is a convenience wrapper, that allows this ::
@mockenv(RUN_SLOW=True, USE_TF=False) def test_something():
run_slow = os.getenv("RUN_SLOW", False) use_tf = os.getenv("USE_TF", False)
"""
return mock.patch.dict(os.environ, kwargs)
# from https://stackoverflow.com/a/34333710/9201239
@contextlib.contextmanager
def mockenv_context(*remove, **update):
"""
Temporarily updates the `os.environ` dictionary in-place. Similar to mockenv
The `os.environ` dictionary is updated in-place so that the modification is sure to work in all situations.
Args:
remove: Environment variables to remove.
update: Dictionary of environment variables and values to add/update.
"""
env = os.environ
update = update or {}
remove = remove or []
# List of environment variables being updated or removed.
stomped = (set(update.keys()) | set(remove)) & set(env.keys())
# Environment variables and values to restore on exit.
update_after = {k: env[k] for k in stomped}
# Environment variables and values to remove on exit.
remove_after = frozenset(k for k in update if k not in env)
try:
env.update(update)
[env.pop(k, None) for k in remove]
yield
finally:
env.update(update_after)
[env.pop(k) for k in remove_after]
# --- pytest conf functions --- #
# to avoid multiple invocation from tests/conftest.py and examples/conftest.py - make sure it's called only once
pytest_opt_registered = {}
def pytest_addoption_shared(parser):
"""
This function is to be called from `conftest.py` via `pytest_addoption` wrapper that has to be defined there.
It allows loading both `conftest.py` files at once without causing a failure due to adding the same `pytest`
option.
"""
option = "--make-reports"
if option not in pytest_opt_registered:
parser.addoption(
option,
action="store",
default=False,
help="generate report files. The value of this option is used as a prefix to report names",
)
pytest_opt_registered[option] = 1
def pytest_terminal_summary_main(tr, id):
"""
Generate multiple reports at the end of test suite run - each report goes into a dedicated file in the current
directory. The report files are prefixed with the test suite name.
This function emulates --duration and -rA pytest arguments.
This function is to be called from `conftest.py` via `pytest_terminal_summary` wrapper that has to be defined
there.
Args:
- tr: `terminalreporter` passed from `conftest.py`
- id: unique id like `tests` or `examples` that will be incorporated into the final reports filenames - this is
needed as some jobs have multiple runs of pytest, so we can't have them overwrite each other.
NB: this functions taps into a private _pytest API and while unlikely, it could break should pytest do internal
changes - also it calls default internal methods of terminalreporter which can be hijacked by various `pytest-`
plugins and interfere.
"""
from _pytest.config import create_terminal_writer
if not len(id):
id = "tests"
config = tr.config
orig_writer = config.get_terminal_writer()
orig_tbstyle = config.option.tbstyle
orig_reportchars = tr.reportchars
dir = f"reports/{id}"
Path(dir).mkdir(parents=True, exist_ok=True)
report_files = {
k: f"{dir}/{k}.txt"
for k in [
"durations",
"errors",
"failures_long",
"failures_short",
"failures_line",
"passes",
"stats",
"summary_short",
"warnings",
]
}
# custom durations report
# note: there is no need to call pytest --durations=XX to get this separate report
# adapted from https://github.com/pytest-dev/pytest/blob/897f151e/src/_pytest/runner.py#L66
dlist = []
for replist in tr.stats.values():
for rep in replist:
if hasattr(rep, "duration"):
dlist.append(rep)
if dlist:
dlist.sort(key=lambda x: x.duration, reverse=True)
with open(report_files["durations"], "w") as f:
durations_min = 0.05 # sec
f.write("slowest durations\n")
for i, rep in enumerate(dlist):
if rep.duration < durations_min:
f.write(f"{len(dlist)-i} durations < {durations_min} secs were omitted")
break
f.write(f"{rep.duration:02.2f}s {rep.when:<8} {rep.nodeid}\n")
def summary_failures_short(tr):
# expecting that the reports were --tb=long (default) so we chop them off here to the last frame
reports = tr.getreports("failed")
if not reports:
return
tr.write_sep("=", "FAILURES SHORT STACK")
for rep in reports:
msg = tr._getfailureheadline(rep)
tr.write_sep("_", msg, red=True, bold=True)
# chop off the optional leading extra frames, leaving only the last one
longrepr = re.sub(r".*_ _ _ (_ ){10,}_ _ ", "", rep.longreprtext, 0, re.M | re.S)
tr._tw.line(longrepr)
# note: not printing out any rep.sections to keep the report short
# use ready-made report funcs, we are just hijacking the filehandle to log to a dedicated file each
# adapted from https://github.com/pytest-dev/pytest/blob/897f151e/src/_pytest/terminal.py#L814
# note: some pytest plugins may interfere by hijacking the default `terminalreporter` (e.g.
# pytest-instafail does that)
# report failures with line/short/long styles
config.option.tbstyle = "auto" # full tb
with open(report_files["failures_long"], "w") as f:
tr._tw = create_terminal_writer(config, f)
tr.summary_failures()
# config.option.tbstyle = "short" # short tb
with open(report_files["failures_short"], "w") as f:
tr._tw = create_terminal_writer(config, f)
summary_failures_short(tr)
config.option.tbstyle = "line" # one line per error
with open(report_files["failures_line"], "w") as f:
tr._tw = create_terminal_writer(config, f)
tr.summary_failures()
with open(report_files["errors"], "w") as f:
tr._tw = create_terminal_writer(config, f)
tr.summary_errors()
with open(report_files["warnings"], "w") as f:
tr._tw = create_terminal_writer(config, f)
tr.summary_warnings() # normal warnings
tr.summary_warnings() # final warnings
tr.reportchars = "wPpsxXEf" # emulate -rA (used in summary_passes() and short_test_summary())
with open(report_files["passes"], "w") as f:
tr._tw = create_terminal_writer(config, f)
tr.summary_passes()
with open(report_files["summary_short"], "w") as f:
tr._tw = create_terminal_writer(config, f)
tr.short_test_summary()
with open(report_files["stats"], "w") as f:
tr._tw = create_terminal_writer(config, f)
tr.summary_stats()
# restore:
tr._tw = orig_writer
tr.reportchars = orig_reportchars
config.option.tbstyle = orig_tbstyle
# --- distributed testing functions --- #
# adapted from https://stackoverflow.com/a/59041913/9201239
import asyncio # noqa
class _RunOutput:
def __init__(self, returncode, stdout, stderr):
self.returncode = returncode
self.stdout = stdout
self.stderr = stderr
async def _read_stream(stream, callback):
while True:
line = await stream.readline()
if line:
callback(line)
else:
break
async def _stream_subprocess(cmd, env=None, stdin=None, timeout=None, quiet=False, echo=False) -> _RunOutput:
if echo:
print("\nRunning: ", " ".join(cmd))
p = await asyncio.create_subprocess_exec(
cmd[0],
*cmd[1:],
stdin=stdin,
stdout=asyncio.subprocess.PIPE,
stderr=asyncio.subprocess.PIPE,
env=env,
)
# note: there is a warning for a possible deadlock when using `wait` with huge amounts of data in the pipe
# https://docs.python.org/3/library/asyncio-subprocess.html#asyncio.asyncio.subprocess.Process.wait
#
# If it starts hanging, will need to switch to the following code. The problem is that no data
# will be seen until it's done and if it hangs for example there will be no debug info.
# out, err = await p.communicate()
# return _RunOutput(p.returncode, out, err)
out = []
err = []
def tee(line, sink, pipe, label=""):
line = line.decode("utf-8").rstrip()
sink.append(line)
if not quiet:
print(label, line, file=pipe)
# XXX: the timeout doesn't seem to make any difference here
await asyncio.wait(
[
_read_stream(p.stdout, lambda l: tee(l, out, sys.stdout, label="stdout:")),
_read_stream(p.stderr, lambda l: tee(l, err, sys.stderr, label="stderr:")),
],
timeout=timeout,
)
return _RunOutput(await p.wait(), out, err)
def execute_subprocess_async(cmd, env=None, stdin=None, timeout=180, quiet=False, echo=True) -> _RunOutput:
loop = asyncio.get_event_loop()
result = loop.run_until_complete(
_stream_subprocess(cmd, env=env, stdin=stdin, timeout=timeout, quiet=quiet, echo=echo)
)
cmd_str = " ".join(cmd)
if result.returncode > 0:
stderr = "\n".join(result.stderr)
raise RuntimeError(
f"'{cmd_str}' failed with returncode {result.returncode}\n\n"
f"The combined stderr from workers follows:\n{stderr}"
)
# check that the subprocess actually did run and produced some output, should the test rely on
# the remote side to do the testing
if not result.stdout and not result.stderr:
raise RuntimeError(f"'{cmd_str}' produced no output.")
return result
def pytest_xdist_worker_id():
"""
Returns an int value of worker's numerical id under `pytest-xdist`'s concurrent workers `pytest -n N` regime, or 0
if `-n 1` or `pytest-xdist` isn't being used.
"""
worker = os.environ.get("PYTEST_XDIST_WORKER", "gw0")
worker = re.sub(r"^gw", "", worker, 0, re.M)
return int(worker)
def get_torch_dist_unique_port():
"""
Returns a port number that can be fed to `torch.distributed.launch`'s `--master_port` argument.
Under `pytest-xdist` it adds a delta number based on a worker id so that concurrent tests don't try to use the same
port at once.
"""
port = 29500
uniq_delta = pytest_xdist_worker_id()
return port + uniq_delta
def nested_simplify(obj, decimals=3):
"""
Simplifies an object by rounding float numbers, and downcasting tensors/numpy arrays to get simple equality test
within tests.
"""
import numpy as np
from transformers.tokenization_utils import BatchEncoding
if isinstance(obj, list):
return [nested_simplify(item, decimals) for item in obj]
elif isinstance(obj, np.ndarray):
return nested_simplify(obj.tolist())
elif isinstance(obj, (dict, BatchEncoding)):
return {nested_simplify(k, decimals): nested_simplify(v, decimals) for k, v in obj.items()}
elif isinstance(obj, (str, int, np.int64)):
return obj
elif obj is None:
return obj
elif is_torch_available() and isinstance(obj, torch.Tensor):
return nested_simplify(obj.tolist(), decimals)
elif is_tf_available() and tf.is_tensor(obj):
return nested_simplify(obj.numpy().tolist())
elif isinstance(obj, float):
return round(obj, decimals)
elif isinstance(obj, (np.int32, np.float32)):
return nested_simplify(obj.item(), decimals)
else:
raise Exception(f"Not supported: {type(obj)}")
| 47,978 | 30.71117 | 119 | py |
robust-transformers | robust-transformers-main/src/transformers/modeling_flax_outputs.py | # Copyright 2021 The HuggingFace Team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
from typing import Dict, Optional, Tuple
import flax
import jax.numpy as jnp
from .file_utils import ModelOutput
@flax.struct.dataclass
class FlaxBaseModelOutput(ModelOutput):
"""
Base class for model's outputs, with potential hidden states and attentions.
Args:
last_hidden_state (`jnp.ndarray` of shape `(batch_size, sequence_length, hidden_size)`):
Sequence of hidden-states at the output of the last layer of the model.
hidden_states (`tuple(jnp.ndarray)`, *optional*, returned when `output_hidden_states=True` is passed or when `config.output_hidden_states=True`):
Tuple of `jnp.ndarray` (one for the output of the embeddings + one for the output of each layer) of shape
`(batch_size, sequence_length, hidden_size)`.
Hidden-states of the model at the output of each layer plus the initial embedding outputs.
attentions (`tuple(jnp.ndarray)`, *optional*, returned when `output_attentions=True` is passed or when `config.output_attentions=True`):
Tuple of `jnp.ndarray` (one for each layer) of shape `(batch_size, num_heads, sequence_length,
sequence_length)`.
Attentions weights after the attention softmax, used to compute the weighted average in the self-attention
heads.
"""
last_hidden_state: jnp.ndarray = None
hidden_states: Optional[Tuple[jnp.ndarray]] = None
attentions: Optional[Tuple[jnp.ndarray]] = None
@flax.struct.dataclass
class FlaxBaseModelOutputWithPast(ModelOutput):
"""
Base class for model's outputs, with potential hidden states and attentions.
Args:
last_hidden_state (`jnp.ndarray` of shape `(batch_size, sequence_length, hidden_size)`):
Sequence of hidden-states at the output of the last layer of the model.
past_key_values (`Dict[str, jnp.ndarray]`):
Dictionary of pre-computed hidden-states (key and values in the attention blocks) that can be used for fast
auto-regressive decoding. Pre-computed key and value hidden-states are of shape *[batch_size, max_length]*.
hidden_states (`tuple(jnp.ndarray)`, *optional*, returned when `output_hidden_states=True` is passed or when `config.output_hidden_states=True`):
Tuple of `jnp.ndarray` (one for the output of the embeddings + one for the output of each layer) of shape
`(batch_size, sequence_length, hidden_size)`.
Hidden-states of the model at the output of each layer plus the initial embedding outputs.
attentions (`tuple(jnp.ndarray)`, *optional*, returned when `output_attentions=True` is passed or when `config.output_attentions=True`):
Tuple of `jnp.ndarray` (one for each layer) of shape `(batch_size, num_heads, sequence_length,
sequence_length)`.
Attentions weights after the attention softmax, used to compute the weighted average in the self-attention
heads.
"""
last_hidden_state: jnp.ndarray = None
past_key_values: Optional[Dict[str, jnp.ndarray]] = None
hidden_states: Optional[Tuple[jnp.ndarray]] = None
attentions: Optional[Tuple[jnp.ndarray]] = None
@flax.struct.dataclass
class FlaxBaseModelOutputWithPooling(ModelOutput):
"""
Base class for model's outputs that also contains a pooling of the last hidden states.
Args:
last_hidden_state (`jnp.ndarray` of shape `(batch_size, sequence_length, hidden_size)`):
Sequence of hidden-states at the output of the last layer of the model.
pooler_output (`jnp.ndarray` of shape `(batch_size, hidden_size)`):
Last layer hidden-state of the first token of the sequence (classification token) further processed by a
Linear layer and a Tanh activation function. The Linear layer weights are trained from the next sentence
prediction (classification) objective during pretraining.
hidden_states (`tuple(jnp.ndarray)`, *optional*, returned when `output_hidden_states=True` is passed or when `config.output_hidden_states=True`):
Tuple of `jnp.ndarray` (one for the output of the embeddings + one for the output of each layer) of shape
`(batch_size, sequence_length, hidden_size)`.
Hidden-states of the model at the output of each layer plus the initial embedding outputs.
attentions (`tuple(jnp.ndarray)`, *optional*, returned when `output_attentions=True` is passed or when `config.output_attentions=True`):
Tuple of `jnp.ndarray` (one for each layer) of shape `(batch_size, num_heads, sequence_length,
sequence_length)`.
Attentions weights after the attention softmax, used to compute the weighted average in the self-attention
heads.
"""
last_hidden_state: jnp.ndarray = None
pooler_output: jnp.ndarray = None
hidden_states: Optional[Tuple[jnp.ndarray]] = None
attentions: Optional[Tuple[jnp.ndarray]] = None
@flax.struct.dataclass
class FlaxBaseModelOutputWithPastAndCrossAttentions(ModelOutput):
"""
Base class for model's outputs that may also contain a past key/values (to speed up sequential decoding).
Args:
last_hidden_state (`jnp.ndarray` of shape `(batch_size, sequence_length, hidden_size)`):
Sequence of hidden-states at the output of the last layer of the model.
If `past_key_values` is used only the last hidden-state of the sequences of shape `(batch_size, 1,
hidden_size)` is output.
past_key_values (`tuple(tuple(jnp.ndarray))`, *optional*, returned when `use_cache=True` is passed or when `config.use_cache=True`):
Tuple of `tuple(jnp.ndarray)` of length `config.n_layers`, with each tuple having 2 tensors of shape
`(batch_size, num_heads, sequence_length, embed_size_per_head)`) and optionally if
`config.is_encoder_decoder=True` 2 additional tensors of shape `(batch_size, num_heads,
encoder_sequence_length, embed_size_per_head)`.
Contains pre-computed hidden-states (key and values in the self-attention blocks and optionally if
`config.is_encoder_decoder=True` in the cross-attention blocks) that can be used (see `past_key_values`
input) to speed up sequential decoding.
hidden_states (`tuple(jnp.ndarray)`, *optional*, returned when `output_hidden_states=True` is passed or when `config.output_hidden_states=True`):
Tuple of `jnp.ndarray` (one for the output of the embeddings + one for the output of each layer) of shape
`(batch_size, sequence_length, hidden_size)`.
Hidden-states of the model at the output of each layer plus the initial embedding outputs.
attentions (`tuple(jnp.ndarray)`, *optional*, returned when `output_attentions=True` is passed or when `config.output_attentions=True`):
Tuple of `jnp.ndarray` (one for each layer) of shape `(batch_size, num_heads, sequence_length,
sequence_length)`.
Attentions weights after the attention softmax, used to compute the weighted average in the self-attention
heads.
cross_attentions (`tuple(jnp.ndarray)`, *optional*, returned when `output_attentions=True` and `config.add_cross_attention=True` is passed or when `config.output_attentions=True`):
Tuple of `jnp.ndarray` (one for each layer) of shape `(batch_size, num_heads, sequence_length,
sequence_length)`.
Attentions weights of the decoder's cross-attention layer, after the attention softmax, used to compute the
weighted average in the cross-attention heads.
"""
last_hidden_state: jnp.ndarray = None
past_key_values: Optional[Tuple[Tuple[jnp.ndarray]]] = None
hidden_states: Optional[Tuple[jnp.ndarray]] = None
attentions: Optional[Tuple[jnp.ndarray]] = None
cross_attentions: Optional[Tuple[jnp.ndarray]] = None
@flax.struct.dataclass
class FlaxSeq2SeqModelOutput(ModelOutput):
"""
Base class for model encoder's outputs that also contains : pre-computed hidden states that can speed up sequential
decoding.
Args:
last_hidden_state (`jnp.ndarray` of shape `(batch_size, sequence_length, hidden_size)`):
Sequence of hidden-states at the output of the last layer of the decoder of the model.
If `past_key_values` is used only the last hidden-state of the sequences of shape `(batch_size, 1,
hidden_size)` is output.
past_key_values (`tuple(tuple(jnp.ndarray))`, *optional*, returned when `use_cache=True` is passed or when `config.use_cache=True`):
Tuple of `tuple(jnp.ndarray)` of length `config.n_layers`, with each tuple having 2 tensors of shape
`(batch_size, num_heads, sequence_length, embed_size_per_head)`) and 2 additional tensors of shape
`(batch_size, num_heads, encoder_sequence_length, embed_size_per_head)`.
Contains pre-computed hidden-states (key and values in the self-attention blocks and in the cross-attention
blocks) that can be used (see `past_key_values` input) to speed up sequential decoding.
decoder_hidden_states (`tuple(jnp.ndarray)`, *optional*, returned when `output_hidden_states=True` is passed or when `config.output_hidden_states=True`):
Tuple of `jnp.ndarray` (one for the output of the embeddings + one for the output of each layer) of shape
`(batch_size, sequence_length, hidden_size)`.
Hidden-states of the decoder at the output of each layer plus the initial embedding outputs.
decoder_attentions (`tuple(jnp.ndarray)`, *optional*, returned when `output_attentions=True` is passed or when `config.output_attentions=True`):
Tuple of `jnp.ndarray` (one for each layer) of shape `(batch_size, num_heads, sequence_length,
sequence_length)`.
Attentions weights of the decoder, after the attention softmax, used to compute the weighted average in the
self-attention heads.
cross_attentions (`tuple(jnp.ndarray)`, *optional*, returned when `output_attentions=True` is passed or when `config.output_attentions=True`):
Tuple of `jnp.ndarray` (one for each layer) of shape `(batch_size, num_heads, sequence_length,
sequence_length)`.
Attentions weights of the decoder's cross-attention layer, after the attention softmax, used to compute the
weighted average in the cross-attention heads.
encoder_last_hidden_state (`jnp.ndarray` of shape `(batch_size, sequence_length, hidden_size)`, *optional*):
Sequence of hidden-states at the output of the last layer of the encoder of the model.
encoder_hidden_states (`tuple(jnp.ndarray)`, *optional*, returned when `output_hidden_states=True` is passed or when `config.output_hidden_states=True`):
Tuple of `jnp.ndarray` (one for the output of the embeddings + one for the output of each layer) of shape
`(batch_size, sequence_length, hidden_size)`.
Hidden-states of the encoder at the output of each layer plus the initial embedding outputs.
encoder_attentions (`tuple(jnp.ndarray)`, *optional*, returned when `output_attentions=True` is passed or when `config.output_attentions=True`):
Tuple of `jnp.ndarray` (one for each layer) of shape `(batch_size, num_heads, sequence_length,
sequence_length)`.
Attentions weights of the encoder, after the attention softmax, used to compute the weighted average in the
self-attention heads.
"""
last_hidden_state: jnp.ndarray = None
past_key_values: Optional[Tuple[Tuple[jnp.ndarray]]] = None
decoder_hidden_states: Optional[Tuple[jnp.ndarray]] = None
decoder_attentions: Optional[Tuple[jnp.ndarray]] = None
cross_attentions: Optional[Tuple[jnp.ndarray]] = None
encoder_last_hidden_state: Optional[jnp.ndarray] = None
encoder_hidden_states: Optional[Tuple[jnp.ndarray]] = None
encoder_attentions: Optional[Tuple[jnp.ndarray]] = None
@flax.struct.dataclass
class FlaxCausalLMOutputWithCrossAttentions(ModelOutput):
"""
Base class for causal language model (or autoregressive) outputs.
Args:
logits (`jnp.ndarray` of shape `(batch_size, sequence_length, config.vocab_size)`):
Prediction scores of the language modeling head (scores for each vocabulary token before SoftMax).
hidden_states (`tuple(jnp.ndarray)`, *optional*, returned when `output_hidden_states=True` is passed or when `config.output_hidden_states=True`):
Tuple of `jnp.ndarray` (one for the output of the embeddings + one for the output of each layer) of shape
`(batch_size, sequence_length, hidden_size)`.
Hidden-states of the model at the output of each layer plus the initial embedding outputs.
attentions (`tuple(jnp.ndarray)`, *optional*, returned when `output_attentions=True` is passed or when `config.output_attentions=True`):
Tuple of `jnp.ndarray` (one for each layer) of shape `(batch_size, num_heads, sequence_length,
sequence_length)`.
Attentions weights after the attention softmax, used to compute the weighted average in the self-attention
heads.
cross_attentions (`tuple(jnp.ndarray)`, *optional*, returned when `output_attentions=True` is passed or when `config.output_attentions=True`):
Tuple of `jnp.ndarray` (one for each layer) of shape `(batch_size, num_heads, sequence_length,
sequence_length)`.
Cross attentions weights after the attention softmax, used to compute the weighted average in the
cross-attention heads.
past_key_values (`tuple(tuple(jnp.ndarray))`, *optional*, returned when `use_cache=True` is passed or when `config.use_cache=True`):
Tuple of `jnp.ndarray` tuples of length `config.n_layers`, with each tuple containing the cached key, value
states of the self-attention and the cross-attention layers if model is used in encoder-decoder setting.
Only relevant if `config.is_decoder = True`.
Contains pre-computed hidden-states (key and values in the attention blocks) that can be used (see
`past_key_values` input) to speed up sequential decoding.
"""
logits: jnp.ndarray = None
past_key_values: Optional[Tuple[Tuple[jnp.ndarray]]] = None
hidden_states: Optional[Tuple[jnp.ndarray]] = None
attentions: Optional[Tuple[jnp.ndarray]] = None
cross_attentions: Optional[Tuple[jnp.ndarray]] = None
@flax.struct.dataclass
class FlaxMaskedLMOutput(ModelOutput):
"""
Base class for masked language models outputs.
Args:
logits (`jnp.ndarray` of shape `(batch_size, sequence_length, config.vocab_size)`):
Prediction scores of the language modeling head (scores for each vocabulary token before SoftMax).
hidden_states (`tuple(jnp.ndarray)`, *optional*, returned when `output_hidden_states=True` is passed or when `config.output_hidden_states=True`):
Tuple of `jnp.ndarray` (one for the output of the embeddings + one for the output of each layer) of shape
`(batch_size, sequence_length, hidden_size)`.
Hidden-states of the model at the output of each layer plus the initial embedding outputs.
attentions (`tuple(jnp.ndarray)`, *optional*, returned when `output_attentions=True` is passed or when `config.output_attentions=True`):
Tuple of `jnp.ndarray` (one for each layer) of shape `(batch_size, num_heads, sequence_length,
sequence_length)`.
Attentions weights after the attention softmax, used to compute the weighted average in the self-attention
heads.
"""
logits: jnp.ndarray = None
hidden_states: Optional[Tuple[jnp.ndarray]] = None
attentions: Optional[Tuple[jnp.ndarray]] = None
FlaxCausalLMOutput = FlaxMaskedLMOutput
@flax.struct.dataclass
class FlaxSeq2SeqLMOutput(ModelOutput):
"""
Base class for sequence-to-sequence language models outputs.
Args:
logits (`jnp.ndarray` of shape `(batch_size, sequence_length, config.vocab_size)`):
Prediction scores of the language modeling head (scores for each vocabulary token before SoftMax).
past_key_values (`tuple(tuple(jnp.ndarray))`, *optional*, returned when `use_cache=True` is passed or when `config.use_cache=True`):
Tuple of `tuple(jnp.ndarray)` of length `config.n_layers`, with each tuple having 2 tensors of shape
`(batch_size, num_heads, sequence_length, embed_size_per_head)`) and 2 additional tensors of shape
`(batch_size, num_heads, encoder_sequence_length, embed_size_per_head)`.
Contains pre-computed hidden-states (key and values in the self-attention blocks and in the cross-attention
blocks) that can be used (see `past_key_values` input) to speed up sequential decoding.
decoder_hidden_states (`tuple(jnp.ndarray)`, *optional*, returned when `output_hidden_states=True` is passed or when `config.output_hidden_states=True`):
Tuple of `jnp.ndarray` (one for the output of the embeddings + one for the output of each layer) of shape
`(batch_size, sequence_length, hidden_size)`.
Hidden-states of the decoder at the output of each layer plus the initial embedding outputs.
decoder_attentions (`tuple(jnp.ndarray)`, *optional*, returned when `output_attentions=True` is passed or when `config.output_attentions=True`):
Tuple of `jnp.ndarray` (one for each layer) of shape `(batch_size, num_heads, sequence_length,
sequence_length)`.
Attentions weights of the decoder, after the attention softmax, used to compute the weighted average in the
self-attention heads.
cross_attentions (`tuple(jnp.ndarray)`, *optional*, returned when `output_attentions=True` is passed or when `config.output_attentions=True`):
Tuple of `jnp.ndarray` (one for each layer) of shape `(batch_size, num_heads, sequence_length,
sequence_length)`.
Attentions weights of the decoder's cross-attention layer, after the attention softmax, used to compute the
weighted average in the cross-attention heads.
encoder_last_hidden_state (`jnp.ndarray` of shape `(batch_size, sequence_length, hidden_size)`, *optional*):
Sequence of hidden-states at the output of the last layer of the encoder of the model.
encoder_hidden_states (`tuple(jnp.ndarray)`, *optional*, returned when `output_hidden_states=True` is passed or when `config.output_hidden_states=True`):
Tuple of `jnp.ndarray` (one for the output of the embeddings + one for the output of each layer) of shape
`(batch_size, sequence_length, hidden_size)`.
Hidden-states of the encoder at the output of each layer plus the initial embedding outputs.
encoder_attentions (`tuple(jnp.ndarray)`, *optional*, returned when `output_attentions=True` is passed or when `config.output_attentions=True`):
Tuple of `jnp.ndarray` (one for each layer) of shape `(batch_size, num_heads, sequence_length,
sequence_length)`.
Attentions weights of the encoder, after the attention softmax, used to compute the weighted average in the
self-attention heads.
"""
logits: jnp.ndarray = None
past_key_values: Optional[Tuple[Tuple[jnp.ndarray]]] = None
decoder_hidden_states: Optional[Tuple[jnp.ndarray]] = None
decoder_attentions: Optional[Tuple[jnp.ndarray]] = None
cross_attentions: Optional[Tuple[jnp.ndarray]] = None
encoder_last_hidden_state: Optional[jnp.ndarray] = None
encoder_hidden_states: Optional[Tuple[jnp.ndarray]] = None
encoder_attentions: Optional[Tuple[jnp.ndarray]] = None
@flax.struct.dataclass
class FlaxNextSentencePredictorOutput(ModelOutput):
"""
Base class for outputs of models predicting if two sentences are consecutive or not.
Args:
logits (`jnp.ndarray` of shape `(batch_size, 2)`):
Prediction scores of the next sequence prediction (classification) head (scores of True/False continuation
before SoftMax).
hidden_states (`tuple(jnp.ndarray)`, *optional*, returned when `output_hidden_states=True` is passed or when `config.output_hidden_states=True`):
Tuple of `jnp.ndarray` (one for the output of the embeddings + one for the output of each layer) of shape
`(batch_size, sequence_length, hidden_size)`.
Hidden-states of the model at the output of each layer plus the initial embedding outputs.
attentions (`tuple(jnp.ndarray)`, *optional*, returned when `output_attentions=True` is passed or when `config.output_attentions=True`):
Tuple of `jnp.ndarray` (one for each layer) of shape `(batch_size, num_heads, sequence_length,
sequence_length)`.
Attentions weights after the attention softmax, used to compute the weighted average in the self-attention
heads.
"""
logits: jnp.ndarray = None
hidden_states: Optional[Tuple[jnp.ndarray]] = None
attentions: Optional[Tuple[jnp.ndarray]] = None
@flax.struct.dataclass
class FlaxSequenceClassifierOutput(ModelOutput):
"""
Base class for outputs of sentence classification models.
Args:
logits (`jnp.ndarray` of shape `(batch_size, config.num_labels)`):
Classification (or regression if config.num_labels==1) scores (before SoftMax).
hidden_states (`tuple(jnp.ndarray)`, *optional*, returned when `output_hidden_states=True` is passed or when `config.output_hidden_states=True`):
Tuple of `jnp.ndarray` (one for the output of the embeddings + one for the output of each layer) of shape
`(batch_size, sequence_length, hidden_size)`.
Hidden-states of the model at the output of each layer plus the initial embedding outputs.
attentions (`tuple(jnp.ndarray)`, *optional*, returned when `output_attentions=True` is passed or when `config.output_attentions=True`):
Tuple of `jnp.ndarray` (one for each layer) of shape `(batch_size, num_heads, sequence_length,
sequence_length)`.
Attentions weights after the attention softmax, used to compute the weighted average in the self-attention
heads.
"""
logits: jnp.ndarray = None
hidden_states: Optional[Tuple[jnp.ndarray]] = None
attentions: Optional[Tuple[jnp.ndarray]] = None
@flax.struct.dataclass
class FlaxSeq2SeqSequenceClassifierOutput(ModelOutput):
"""
Base class for outputs of sequence-to-sequence sentence classification models.
Args:
logits (`jnp.ndarray` of shape `(batch_size, config.num_labels)`):
Classification (or regression if config.num_labels==1) scores (before SoftMax).
past_key_values (`tuple(tuple(jnp.ndarray))`, *optional*, returned when `use_cache=True` is passed or when `config.use_cache=True`):
Tuple of `tuple(jnp.ndarray)` of length `config.n_layers`, with each tuple having 2 tensors of shape
`(batch_size, num_heads, sequence_length, embed_size_per_head)`) and 2 additional tensors of shape
`(batch_size, num_heads, encoder_sequence_length, embed_size_per_head)`.
Contains pre-computed hidden-states (key and values in the self-attention blocks and in the cross-attention
blocks) that can be used (see `past_key_values` input) to speed up sequential decoding.
decoder_hidden_states (`tuple(jnp.ndarray)`, *optional*, returned when `output_hidden_states=True` is passed or when `config.output_hidden_states=True`):
Tuple of `jnp.ndarray` (one for the output of the embeddings + one for the output of each layer) of shape
`(batch_size, sequence_length, hidden_size)`.
Hidden-states of the decoder at the output of each layer plus the initial embedding outputs.
decoder_attentions (`tuple(jnp.ndarray)`, *optional*, returned when `output_attentions=True` is passed or when `config.output_attentions=True`):
Tuple of `jnp.ndarray` (one for each layer) of shape `(batch_size, num_heads, sequence_length,
sequence_length)`.
Attentions weights of the decoder, after the attention softmax, used to compute the weighted average in the
self-attention heads.
cross_attentions (`tuple(jnp.ndarray)`, *optional*, returned when `output_attentions=True` is passed or when `config.output_attentions=True`):
Tuple of `jnp.ndarray` (one for each layer) of shape `(batch_size, num_heads, sequence_length,
sequence_length)`.
Attentions weights of the decoder's cross-attention layer, after the attention softmax, used to compute the
weighted average in the cross-attention heads.
encoder_last_hidden_state (`jnp.ndarray` of shape `(batch_size, sequence_length, hidden_size)`, *optional*):
Sequence of hidden-states at the output of the last layer of the encoder of the model.
encoder_hidden_states (`tuple(jnp.ndarray)`, *optional*, returned when `output_hidden_states=True` is passed or when `config.output_hidden_states=True`):
Tuple of `jnp.ndarray` (one for the output of the embeddings + one for the output of each layer) of shape
`(batch_size, sequence_length, hidden_size)`.
Hidden-states of the encoder at the output of each layer plus the initial embedding outputs.
encoder_attentions (`tuple(jnp.ndarray)`, *optional*, returned when `output_attentions=True` is passed or when `config.output_attentions=True`):
Tuple of `jnp.ndarray` (one for each layer) of shape `(batch_size, num_heads, sequence_length,
sequence_length)`.
Attentions weights of the encoder, after the attention softmax, used to compute the weighted average in the
self-attention heads.
"""
logits: jnp.ndarray = None
past_key_values: Optional[Tuple[Tuple[jnp.ndarray]]] = None
decoder_hidden_states: Optional[Tuple[jnp.ndarray]] = None
decoder_attentions: Optional[Tuple[jnp.ndarray]] = None
cross_attentions: Optional[Tuple[jnp.ndarray]] = None
encoder_last_hidden_state: Optional[jnp.ndarray] = None
encoder_hidden_states: Optional[Tuple[jnp.ndarray]] = None
encoder_attentions: Optional[Tuple[jnp.ndarray]] = None
@flax.struct.dataclass
class FlaxMultipleChoiceModelOutput(ModelOutput):
"""
Base class for outputs of multiple choice models.
Args:
logits (`jnp.ndarray` of shape `(batch_size, num_choices)`):
*num_choices* is the second dimension of the input tensors. (see *input_ids* above).
Classification scores (before SoftMax).
hidden_states (`tuple(jnp.ndarray)`, *optional*, returned when `output_hidden_states=True` is passed or when `config.output_hidden_states=True`):
Tuple of `jnp.ndarray` (one for the output of the embeddings + one for the output of each layer) of shape
`(batch_size, sequence_length, hidden_size)`.
Hidden-states of the model at the output of each layer plus the initial embedding outputs.
attentions (`tuple(jnp.ndarray)`, *optional*, returned when `output_attentions=True` is passed or when `config.output_attentions=True`):
Tuple of `jnp.ndarray` (one for each layer) of shape `(batch_size, num_heads, sequence_length,
sequence_length)`.
Attentions weights after the attention softmax, used to compute the weighted average in the self-attention
heads.
"""
logits: jnp.ndarray = None
hidden_states: Optional[Tuple[jnp.ndarray]] = None
attentions: Optional[Tuple[jnp.ndarray]] = None
@flax.struct.dataclass
class FlaxTokenClassifierOutput(ModelOutput):
"""
Base class for outputs of token classification models.
Args:
logits (`jnp.ndarray` of shape `(batch_size, sequence_length, config.num_labels)`):
Classification scores (before SoftMax).
hidden_states (`tuple(jnp.ndarray)`, *optional*, returned when `output_hidden_states=True` is passed or when `config.output_hidden_states=True`):
Tuple of `jnp.ndarray` (one for the output of the embeddings + one for the output of each layer) of shape
`(batch_size, sequence_length, hidden_size)`.
Hidden-states of the model at the output of each layer plus the initial embedding outputs.
attentions (`tuple(jnp.ndarray)`, *optional*, returned when `output_attentions=True` is passed or when `config.output_attentions=True`):
Tuple of `jnp.ndarray` (one for each layer) of shape `(batch_size, num_heads, sequence_length,
sequence_length)`.
Attentions weights after the attention softmax, used to compute the weighted average in the self-attention
heads.
"""
logits: jnp.ndarray = None
hidden_states: Optional[Tuple[jnp.ndarray]] = None
attentions: Optional[Tuple[jnp.ndarray]] = None
@flax.struct.dataclass
class FlaxQuestionAnsweringModelOutput(ModelOutput):
"""
Base class for outputs of question answering models.
Args:
start_logits (`jnp.ndarray` of shape `(batch_size, sequence_length)`):
Span-start scores (before SoftMax).
end_logits (`jnp.ndarray` of shape `(batch_size, sequence_length)`):
Span-end scores (before SoftMax).
hidden_states (`tuple(jnp.ndarray)`, *optional*, returned when `output_hidden_states=True` is passed or when `config.output_hidden_states=True`):
Tuple of `jnp.ndarray` (one for the output of the embeddings + one for the output of each layer) of shape
`(batch_size, sequence_length, hidden_size)`.
Hidden-states of the model at the output of each layer plus the initial embedding outputs.
attentions (`tuple(jnp.ndarray)`, *optional*, returned when `output_attentions=True` is passed or when `config.output_attentions=True`):
Tuple of `jnp.ndarray` (one for each layer) of shape `(batch_size, num_heads, sequence_length,
sequence_length)`.
Attentions weights after the attention softmax, used to compute the weighted average in the self-attention
heads.
"""
start_logits: jnp.ndarray = None
end_logits: jnp.ndarray = None
hidden_states: Optional[Tuple[jnp.ndarray]] = None
attentions: Optional[Tuple[jnp.ndarray]] = None
@flax.struct.dataclass
class FlaxSeq2SeqQuestionAnsweringModelOutput(ModelOutput):
"""
Base class for outputs of sequence-to-sequence question answering models.
Args:
start_logits (`jnp.ndarray` of shape `(batch_size, sequence_length)`):
Span-start scores (before SoftMax).
end_logits (`jnp.ndarray` of shape `(batch_size, sequence_length)`):
Span-end scores (before SoftMax).
past_key_values (`tuple(tuple(jnp.ndarray))`, *optional*, returned when `use_cache=True` is passed or when `config.use_cache=True`):
Tuple of `tuple(jnp.ndarray)` of length `config.n_layers`, with each tuple having 2 tensors of shape
`(batch_size, num_heads, sequence_length, embed_size_per_head)`) and 2 additional tensors of shape
`(batch_size, num_heads, encoder_sequence_length, embed_size_per_head)`.
Contains pre-computed hidden-states (key and values in the self-attention blocks and in the cross-attention
blocks) that can be used (see `past_key_values` input) to speed up sequential decoding.
decoder_hidden_states (`tuple(jnp.ndarray)`, *optional*, returned when `output_hidden_states=True` is passed or when `config.output_hidden_states=True`):
Tuple of `jnp.ndarray` (one for the output of the embeddings + one for the output of each layer) of shape
`(batch_size, sequence_length, hidden_size)`.
Hidden-states of the decoder at the output of each layer plus the initial embedding outputs.
decoder_attentions (`tuple(jnp.ndarray)`, *optional*, returned when `output_attentions=True` is passed or when `config.output_attentions=True`):
Tuple of `jnp.ndarray` (one for each layer) of shape `(batch_size, num_heads, sequence_length,
sequence_length)`.
Attentions weights of the decoder, after the attention softmax, used to compute the weighted average in the
self-attention heads.
cross_attentions (`tuple(jnp.ndarray)`, *optional*, returned when `output_attentions=True` is passed or when `config.output_attentions=True`):
Tuple of `jnp.ndarray` (one for each layer) of shape `(batch_size, num_heads, sequence_length,
sequence_length)`.
Attentions weights of the decoder's cross-attention layer, after the attention softmax, used to compute the
weighted average in the cross-attention heads.
encoder_last_hidden_state (`jnp.ndarray` of shape `(batch_size, sequence_length, hidden_size)`, *optional*):
Sequence of hidden-states at the output of the last layer of the encoder of the model.
encoder_hidden_states (`tuple(jnp.ndarray)`, *optional*, returned when `output_hidden_states=True` is passed or when `config.output_hidden_states=True`):
Tuple of `jnp.ndarray` (one for the output of the embeddings + one for the output of each layer) of shape
`(batch_size, sequence_length, hidden_size)`.
Hidden-states of the encoder at the output of each layer plus the initial embedding outputs.
encoder_attentions (`tuple(jnp.ndarray)`, *optional*, returned when `output_attentions=True` is passed or when `config.output_attentions=True`):
Tuple of `jnp.ndarray` (one for each layer) of shape `(batch_size, num_heads, sequence_length,
sequence_length)`.
Attentions weights of the encoder, after the attention softmax, used to compute the weighted average in the
self-attention heads.
"""
start_logits: jnp.ndarray = None
end_logits: jnp.ndarray = None
past_key_values: Optional[Tuple[Tuple[jnp.ndarray]]] = None
decoder_hidden_states: Optional[Tuple[jnp.ndarray]] = None
decoder_attentions: Optional[Tuple[jnp.ndarray]] = None
cross_attentions: Optional[Tuple[jnp.ndarray]] = None
encoder_last_hidden_state: Optional[jnp.ndarray] = None
encoder_hidden_states: Optional[Tuple[jnp.ndarray]] = None
encoder_attentions: Optional[Tuple[jnp.ndarray]] = None
| 35,519 | 58.79798 | 188 | py |
robust-transformers | robust-transformers-main/src/transformers/training_args_tf.py | # Copyright 2020 The HuggingFace Team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
import warnings
from dataclasses import dataclass, field
from typing import Tuple
from .file_utils import cached_property, is_tf_available, tf_required
from .training_args import TrainingArguments
from .utils import logging
logger = logging.get_logger(__name__)
if is_tf_available():
import tensorflow as tf
@dataclass
class TFTrainingArguments(TrainingArguments):
"""
TrainingArguments is the subset of the arguments we use in our example scripts **which relate to the training loop
itself**.
Using [`HfArgumentParser`] we can turn this class into
[argparse](https://docs.python.org/3/library/argparse#module-argparse) arguments that can be specified on the
command line.
Parameters:
output_dir (`str`):
The output directory where the model predictions and checkpoints will be written.
overwrite_output_dir (`bool`, *optional*, defaults to `False`):
If `True`, overwrite the content of the output directory. Use this to continue training if `output_dir`
points to a checkpoint directory.
do_train (`bool`, *optional*, defaults to `False`):
Whether to run training or not. This argument is not directly used by [`Trainer`], it's intended to be used
by your training/evaluation scripts instead. See the [example
scripts](https://github.com/huggingface/transformers/tree/master/examples) for more details.
do_eval (`bool`, *optional*):
Whether to run evaluation on the validation set or not. Will be set to `True` if `evaluation_strategy` is
different from `"no"`. This argument is not directly used by [`Trainer`], it's intended to be used by your
training/evaluation scripts instead. See the [example
scripts](https://github.com/huggingface/transformers/tree/master/examples) for more details.
do_predict (`bool`, *optional*, defaults to `False`):
Whether to run predictions on the test set or not. This argument is not directly used by [`Trainer`], it's
intended to be used by your training/evaluation scripts instead. See the [example
scripts](https://github.com/huggingface/transformers/tree/master/examples) for more details.
evaluation_strategy (`str` or [`~trainer_utils.IntervalStrategy`], *optional*, defaults to `"no"`):
The evaluation strategy to adopt during training. Possible values are:
- `"no"`: No evaluation is done during training.
- `"steps"`: Evaluation is done (and logged) every `eval_steps`.
- `"epoch"`: Evaluation is done at the end of each epoch.
per_device_train_batch_size (`int`, *optional*, defaults to 8):
The batch size per GPU/TPU core/CPU for training.
per_device_eval_batch_size (`int`, *optional*, defaults to 8):
The batch size per GPU/TPU core/CPU for evaluation.
gradient_accumulation_steps: (`int`, *optional*, defaults to 1):
Number of updates steps to accumulate the gradients for, before performing a backward/update pass.
<Tip warning={true}>
When using gradient accumulation, one step is counted as one step with backward pass. Therefore, logging,
evaluation, save will be conducted every `gradient_accumulation_steps * xxx_step` training examples.
</Tip>
learning_rate (`float`, *optional*, defaults to 5e-5):
The initial learning rate for Adam.
weight_decay (`float`, *optional*, defaults to 0):
The weight decay to apply (if not zero).
adam_beta1 (`float`, *optional*, defaults to 0.9):
The beta1 hyperparameter for the Adam optimizer.
adam_beta2 (`float`, *optional*, defaults to 0.999):
The beta2 hyperparameter for the Adam optimizer.
adam_epsilon (`float`, *optional*, defaults to 1e-8):
The epsilon hyperparameter for the Adam optimizer.
max_grad_norm (`float`, *optional*, defaults to 1.0):
Maximum gradient norm (for gradient clipping).
num_train_epochs(`float`, *optional*, defaults to 3.0):
Total number of training epochs to perform.
max_steps (`int`, *optional*, defaults to -1):
If set to a positive number, the total number of training steps to perform. Overrides `num_train_epochs`.
warmup_ratio (`float`, *optional*, defaults to 0.0):
Ratio of total training steps used for a linear warmup from 0 to `learning_rate`.
warmup_steps (`int`, *optional*, defaults to 0):
Number of steps used for a linear warmup from 0 to `learning_rate`. Overrides any effect of `warmup_ratio`.
logging_dir (`str`, *optional*):
[TensorBoard](https://www.tensorflow.org/tensorboard) log directory. Will default to
*runs/**CURRENT_DATETIME_HOSTNAME***.
logging_strategy (`str` or [`~trainer_utils.IntervalStrategy`], *optional*, defaults to `"steps"`):
The logging strategy to adopt during training. Possible values are:
- `"no"`: No logging is done during training.
- `"epoch"`: Logging is done at the end of each epoch.
- `"steps"`: Logging is done every `logging_steps`.
logging_first_step (`bool`, *optional*, defaults to `False`):
Whether to log and evaluate the first `global_step` or not.
logging_steps (`int`, *optional*, defaults to 500):
Number of update steps between two logs if `logging_strategy="steps"`.
save_strategy (`str` or [`~trainer_utils.IntervalStrategy`], *optional*, defaults to `"steps"`):
The checkpoint save strategy to adopt during training. Possible values are:
- `"no"`: No save is done during training.
- `"epoch"`: Save is done at the end of each epoch.
- `"steps"`: Save is done every `save_steps`.
save_steps (`int`, *optional*, defaults to 500):
Number of updates steps before two checkpoint saves if `save_strategy="steps"`.
save_total_limit (`int`, *optional*):
If a value is passed, will limit the total amount of checkpoints. Deletes the older checkpoints in
`output_dir`.
no_cuda (`bool`, *optional*, defaults to `False`):
Whether to not use CUDA even when it is available or not.
seed (`int`, *optional*, defaults to 42):
Random seed that will be set at the beginning of training.
fp16 (`bool`, *optional*, defaults to `False`):
Whether to use 16-bit (mixed) precision training (through NVIDIA Apex) instead of 32-bit training.
fp16_opt_level (`str`, *optional*, defaults to 'O1'):
For `fp16` training, Apex AMP optimization level selected in ['O0', 'O1', 'O2', and 'O3']. See details on
the [Apex documentation](https://nvidia.github.io/apex/amp).
local_rank (`int`, *optional*, defaults to -1):
During distributed training, the rank of the process.
tpu_num_cores (`int`, *optional*):
When training on TPU, the number of TPU cores (automatically passed by launcher script).
debug (`bool`, *optional*, defaults to `False`):
Whether to activate the trace to record computation graphs and profiling information or not.
dataloader_drop_last (`bool`, *optional*, defaults to `False`):
Whether to drop the last incomplete batch (if the length of the dataset is not divisible by the batch size)
or not.
eval_steps (`int`, *optional*, defaults to 1000):
Number of update steps before two evaluations.
past_index (`int`, *optional*, defaults to -1):
Some models like [TransformerXL](../model_doc/transformerxl) or :doc*XLNet <../model_doc/xlnet>* can make
use of the past hidden states for their predictions. If this argument is set to a positive int, the
`Trainer` will use the corresponding output (usually index 2) as the past state and feed it to the model at
the next training step under the keyword argument `mems`.
tpu_name (`str`, *optional*):
The name of the TPU the process is running on.
tpu_zone (`str`, *optional*):
The zone of the TPU the process is running on. If not specified, we will attempt to automatically detect
from metadata.
gcp_project (`str`, *optional*):
Google Cloud Project name for the Cloud TPU-enabled project. If not specified, we will attempt to
automatically detect from metadata.
run_name (`str`, *optional*):
A descriptor for the run. Notably used for wandb logging.
xla (`bool`, *optional*):
Whether to activate the XLA compilation or not.
"""
tpu_name: str = field(
default=None,
metadata={"help": "Name of TPU"},
)
tpu_zone: str = field(
default=None,
metadata={"help": "Zone of TPU"},
)
gcp_project: str = field(
default=None,
metadata={"help": "Name of Cloud TPU-enabled project"},
)
poly_power: float = field(
default=1.0,
metadata={"help": "Power for the Polynomial decay LR scheduler."},
)
xla: bool = field(default=False, metadata={"help": "Whether to activate the XLA compilation or not"})
@cached_property
@tf_required
def _setup_strategy(self) -> Tuple["tf.distribute.Strategy", int]:
logger.info("Tensorflow: setting up strategy")
if self.xla:
tf.config.optimizer.set_jit(True)
gpus = tf.config.list_physical_devices("GPU")
# Set to float16 at first
if self.fp16:
policy = tf.keras.mixed_precision.experimental.Policy("mixed_float16")
tf.keras.mixed_precision.experimental.set_policy(policy)
if self.no_cuda:
strategy = tf.distribute.OneDeviceStrategy(device="/cpu:0")
else:
try:
if self.tpu_name:
tpu = tf.distribute.cluster_resolver.TPUClusterResolver(
self.tpu_name, zone=self.tpu_zone, project=self.gcp_project
)
else:
tpu = tf.distribute.cluster_resolver.TPUClusterResolver()
except ValueError:
if self.tpu_name:
raise RuntimeError(f"Couldn't connect to TPU {self.tpu_name}!")
else:
tpu = None
if tpu:
# Set to bfloat16 in case of TPU
if self.fp16:
policy = tf.keras.mixed_precision.experimental.Policy("mixed_bfloat16")
tf.keras.mixed_precision.experimental.set_policy(policy)
tf.config.experimental_connect_to_cluster(tpu)
tf.tpu.experimental.initialize_tpu_system(tpu)
strategy = tf.distribute.TPUStrategy(tpu)
elif len(gpus) == 0:
strategy = tf.distribute.OneDeviceStrategy(device="/cpu:0")
elif len(gpus) == 1:
strategy = tf.distribute.OneDeviceStrategy(device="/gpu:0")
elif len(gpus) > 1:
# If you only want to use a specific subset of GPUs use `CUDA_VISIBLE_DEVICES=0`
strategy = tf.distribute.MirroredStrategy()
else:
raise ValueError("Cannot find the proper strategy, please check your environment properties.")
return strategy
@property
@tf_required
def strategy(self) -> "tf.distribute.Strategy":
"""
The strategy used for distributed training.
"""
return self._setup_strategy
@property
@tf_required
def n_replicas(self) -> int:
"""
The number of replicas (CPUs, GPUs or TPU cores) used in this training.
"""
return self._setup_strategy.num_replicas_in_sync
@property
def train_batch_size(self) -> int:
"""
The actual batch size for training (may differ from `per_gpu_train_batch_size` in distributed training).
"""
if self.per_gpu_train_batch_size:
logger.warning(
"Using deprecated `--per_gpu_train_batch_size` argument which will be removed in a future "
"version. Using `--per_device_train_batch_size` is preferred."
)
per_device_batch_size = self.per_gpu_train_batch_size or self.per_device_train_batch_size
return per_device_batch_size * self.n_replicas
@property
def eval_batch_size(self) -> int:
"""
The actual batch size for evaluation (may differ from `per_gpu_eval_batch_size` in distributed training).
"""
if self.per_gpu_eval_batch_size:
logger.warning(
"Using deprecated `--per_gpu_eval_batch_size` argument which will be removed in a future "
"version. Using `--per_device_eval_batch_size` is preferred."
)
per_device_batch_size = self.per_gpu_eval_batch_size or self.per_device_eval_batch_size
return per_device_batch_size * self.n_replicas
@property
@tf_required
def n_gpu(self) -> int:
"""
The number of replicas (CPUs, GPUs or TPU cores) used in this training.
"""
warnings.warn(
"The n_gpu argument is deprecated and will be removed in a future version, use n_replicas instead.",
FutureWarning,
)
return self._setup_strategy.num_replicas_in_sync
| 14,296 | 47.629252 | 119 | py |
robust-transformers | robust-transformers-main/src/transformers/convert_graph_to_onnx.py | # Copyright 2020 The HuggingFace Team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
import warnings
from argparse import ArgumentParser
from os import listdir, makedirs
from pathlib import Path
from typing import Dict, List, Optional, Tuple
from packaging.version import Version, parse
from transformers.file_utils import ModelOutput, is_tf_available, is_torch_available
from transformers.pipelines import Pipeline, pipeline
from transformers.tokenization_utils import BatchEncoding
# This is the minimal required version to
# support some ONNX Runtime features
ORT_QUANTIZE_MINIMUM_VERSION = parse("1.4.0")
SUPPORTED_PIPELINES = [
"feature-extraction",
"ner",
"sentiment-analysis",
"fill-mask",
"question-answering",
"text-generation",
"translation_en_to_fr",
"translation_en_to_de",
"translation_en_to_ro",
]
class OnnxConverterArgumentParser(ArgumentParser):
"""
Wraps all the script arguments supported to export transformers models to ONNX IR
"""
def __init__(self):
super().__init__("ONNX Converter")
self.add_argument(
"--pipeline",
type=str,
choices=SUPPORTED_PIPELINES,
default="feature-extraction",
)
self.add_argument(
"--model",
type=str,
required=True,
help="Model's id or path (ex: bert-base-cased)",
)
self.add_argument("--tokenizer", type=str, help="Tokenizer's id or path (ex: bert-base-cased)")
self.add_argument(
"--framework",
type=str,
choices=["pt", "tf"],
help="Framework for loading the model",
)
self.add_argument("--opset", type=int, default=11, help="ONNX opset to use")
self.add_argument(
"--check-loading",
action="store_true",
help="Check ONNX is able to load the model",
)
self.add_argument(
"--use-external-format",
action="store_true",
help="Allow exporting model >= than 2Gb",
)
self.add_argument(
"--quantize",
action="store_true",
help="Quantize the neural network to be run with int8",
)
self.add_argument("output")
def generate_identified_filename(filename: Path, identifier: str) -> Path:
"""
Append a string-identifier at the end (before the extension, if any) to the provided filepath
Args:
filename: pathlib.Path The actual path object we would like to add an identifier suffix
identifier: The suffix to add
Returns: String with concatenated identifier at the end of the filename
"""
return filename.parent.joinpath(filename.stem + identifier).with_suffix(filename.suffix)
def check_onnxruntime_requirements(minimum_version: Version):
"""
Check onnxruntime is installed and if the installed version match is recent enough
Raises:
ImportError: If onnxruntime is not installed or too old version is found
"""
try:
import onnxruntime
# Parse the version of the installed onnxruntime
ort_version = parse(onnxruntime.__version__)
# We require 1.4.0 minimum
if ort_version < ORT_QUANTIZE_MINIMUM_VERSION:
raise ImportError(
f"We found an older version of onnxruntime ({onnxruntime.__version__}) "
f"but we require onnxruntime to be >= {minimum_version} to enable all the conversions options.\n"
f"Please update onnxruntime by running `pip install --upgrade onnxruntime`"
)
except ImportError:
raise ImportError(
"onnxruntime doesn't seem to be currently installed. "
"Please install the onnxruntime by running `pip install onnxruntime`"
" and relaunch the conversion."
)
def ensure_valid_input(model, tokens, input_names):
"""
Ensure input are presented in the correct order, without any Non
Args:
model: The model used to forward the input data
tokens: BatchEncoding holding the input data
input_names: The name of the inputs
Returns: Tuple
"""
print("Ensuring inputs are in correct order")
model_args_name = model.forward.__code__.co_varnames
model_args, ordered_input_names = [], []
for arg_name in model_args_name[1:]: # start at index 1 to skip "self" argument
if arg_name in input_names:
ordered_input_names.append(arg_name)
model_args.append(tokens[arg_name])
else:
print(f"{arg_name} is not present in the generated input list.")
break
print(f"Generated inputs order: {ordered_input_names}")
return ordered_input_names, tuple(model_args)
def infer_shapes(nlp: Pipeline, framework: str) -> Tuple[List[str], List[str], Dict, BatchEncoding]:
"""
Attempt to infer the static vs dynamic axes for each input and output tensors for a specific model
Args:
nlp: The pipeline object holding the model to be exported
framework: The framework identifier to dispatch to the correct inference scheme (pt/tf)
Returns:
- List of the inferred input variable names
- List of the inferred output variable names
- Dictionary with input/output variables names as key and shape tensor as value
- a BatchEncoding reference which was used to infer all the above information
"""
def build_shape_dict(name: str, tensor, is_input: bool, seq_len: int):
if isinstance(tensor, (tuple, list)):
return [build_shape_dict(name, t, is_input, seq_len) for t in tensor]
else:
# Let's assume batch is the first axis with only 1 element (~~ might not be always true ...)
axes = {[axis for axis, numel in enumerate(tensor.shape) if numel == 1][0]: "batch"}
if is_input:
if len(tensor.shape) == 2:
axes[1] = "sequence"
else:
raise ValueError(f"Unable to infer tensor axes ({len(tensor.shape)})")
else:
seq_axes = [dim for dim, shape in enumerate(tensor.shape) if shape == seq_len]
axes.update({dim: "sequence" for dim in seq_axes})
print(f"Found {'input' if is_input else 'output'} {name} with shape: {axes}")
return axes
tokens = nlp.tokenizer("This is a sample output", return_tensors=framework)
seq_len = tokens.input_ids.shape[-1]
outputs = nlp.model(**tokens) if framework == "pt" else nlp.model(tokens)
if isinstance(outputs, ModelOutput):
outputs = outputs.to_tuple()
if not isinstance(outputs, (list, tuple)):
outputs = (outputs,)
# Generate input names & axes
input_vars = list(tokens.keys())
input_dynamic_axes = {k: build_shape_dict(k, v, True, seq_len) for k, v in tokens.items()}
# flatten potentially grouped outputs (past for gpt2, attentions)
outputs_flat = []
for output in outputs:
if isinstance(output, (tuple, list)):
outputs_flat.extend(output)
else:
outputs_flat.append(output)
# Generate output names & axes
output_names = [f"output_{i}" for i in range(len(outputs_flat))]
output_dynamic_axes = {k: build_shape_dict(k, v, False, seq_len) for k, v in zip(output_names, outputs_flat)}
# Create the aggregated axes representation
dynamic_axes = dict(input_dynamic_axes, **output_dynamic_axes)
return input_vars, output_names, dynamic_axes, tokens
def load_graph_from_args(
pipeline_name: str, framework: str, model: str, tokenizer: Optional[str] = None, **models_kwargs
) -> Pipeline:
"""
Convert the set of arguments provided through the CLI to an actual pipeline reference (tokenizer + model
Args:
pipeline_name: The kind of pipeline to use (ner, question-answering, etc.)
framework: The actual model to convert the pipeline from ("pt" or "tf")
model: The model name which will be loaded by the pipeline
tokenizer: The tokenizer name which will be loaded by the pipeline, default to the model's value
Returns: Pipeline object
"""
# If no tokenizer provided
if tokenizer is None:
tokenizer = model
# Check the wanted framework is available
if framework == "pt" and not is_torch_available():
raise Exception("Cannot convert because PyTorch is not installed. Please install torch first.")
if framework == "tf" and not is_tf_available():
raise Exception("Cannot convert because TF is not installed. Please install tensorflow first.")
print(f"Loading pipeline (model: {model}, tokenizer: {tokenizer})")
# Allocate tokenizer and model
return pipeline(pipeline_name, model=model, tokenizer=tokenizer, framework=framework, model_kwargs=models_kwargs)
def convert_pytorch(nlp: Pipeline, opset: int, output: Path, use_external_format: bool):
"""
Export a PyTorch backed pipeline to ONNX Intermediate Representation (IR
Args:
nlp: The pipeline to be exported
opset: The actual version of the ONNX operator set to use
output: Path where will be stored the generated ONNX model
use_external_format: Split the model definition from its parameters to allow model bigger than 2GB
Returns:
"""
if not is_torch_available():
raise Exception("Cannot convert because PyTorch is not installed. Please install torch first.")
import torch
from torch.onnx import export
print(f"Using framework PyTorch: {torch.__version__}")
with torch.no_grad():
input_names, output_names, dynamic_axes, tokens = infer_shapes(nlp, "pt")
ordered_input_names, model_args = ensure_valid_input(nlp.model, tokens, input_names)
# PyTorch deprecated the `enable_onnx_checker` and `use_external_data_format` arguments in v1.11,
# so we check the torch version for backwards compatibility
if parse(torch.__version__) <= parse("1.10.99"):
export(
nlp.model,
model_args,
f=output.as_posix(),
input_names=ordered_input_names,
output_names=output_names,
dynamic_axes=dynamic_axes,
do_constant_folding=True,
use_external_data_format=use_external_format,
enable_onnx_checker=True,
opset_version=opset,
)
else:
export(
nlp.model,
model_args,
f=output.as_posix(),
input_names=ordered_input_names,
output_names=output_names,
dynamic_axes=dynamic_axes,
do_constant_folding=True,
opset_version=opset,
)
def convert_tensorflow(nlp: Pipeline, opset: int, output: Path):
"""
Export a TensorFlow backed pipeline to ONNX Intermediate Representation (IR)
Args:
nlp: The pipeline to be exported
opset: The actual version of the ONNX operator set to use
output: Path where will be stored the generated ONNX model
Notes: TensorFlow cannot export model bigger than 2GB due to internal constraint from TensorFlow
"""
if not is_tf_available():
raise Exception("Cannot convert because TF is not installed. Please install tensorflow first.")
print("/!\\ Please note TensorFlow doesn't support exporting model > 2Gb /!\\")
try:
import tensorflow as tf
import tf2onnx
from tf2onnx import __version__ as t2ov
print(f"Using framework TensorFlow: {tf.version.VERSION}, tf2onnx: {t2ov}")
# Build
input_names, output_names, dynamic_axes, tokens = infer_shapes(nlp, "tf")
# Forward
nlp.model.predict(tokens.data)
input_signature = [tf.TensorSpec.from_tensor(tensor, name=key) for key, tensor in tokens.items()]
model_proto, _ = tf2onnx.convert.from_keras(
nlp.model, input_signature, opset=opset, output_path=output.as_posix()
)
except ImportError as e:
raise Exception(
f"Cannot import {e.name} required to convert TF model to ONNX. Please install {e.name} first. {e}"
)
def convert(
framework: str,
model: str,
output: Path,
opset: int,
tokenizer: Optional[str] = None,
use_external_format: bool = False,
pipeline_name: str = "feature-extraction",
**model_kwargs
):
"""
Convert the pipeline object to the ONNX Intermediate Representation (IR) format
Args:
framework: The framework the pipeline is backed by ("pt" or "tf")
model: The name of the model to load for the pipeline
output: The path where the ONNX graph will be stored
opset: The actual version of the ONNX operator set to use
tokenizer: The name of the model to load for the pipeline, default to the model's name if not provided
use_external_format:
Split the model definition from its parameters to allow model bigger than 2GB (PyTorch only)
pipeline_name: The kind of pipeline to instantiate (ner, question-answering, etc.)
model_kwargs: Keyword arguments to be forwarded to the model constructor
Returns:
"""
warnings.warn(
"The `transformers.convert_graph_to_onnx` package is deprecated and will be removed in version 5 of Transformers",
FutureWarning,
)
print(f"ONNX opset version set to: {opset}")
# Load the pipeline
nlp = load_graph_from_args(pipeline_name, framework, model, tokenizer, **model_kwargs)
if not output.parent.exists():
print(f"Creating folder {output.parent}")
makedirs(output.parent.as_posix())
elif len(listdir(output.parent.as_posix())) > 0:
raise Exception(f"Folder {output.parent.as_posix()} is not empty, aborting conversion")
# Export the graph
if framework == "pt":
convert_pytorch(nlp, opset, output, use_external_format)
else:
convert_tensorflow(nlp, opset, output)
def optimize(onnx_model_path: Path) -> Path:
"""
Load the model at the specified path and let onnxruntime look at transformations on the graph to enable all the
optimizations possible
Args:
onnx_model_path: filepath where the model binary description is stored
Returns: Path where the optimized model binary description has been saved
"""
from onnxruntime import InferenceSession, SessionOptions
# Generate model name with suffix "optimized"
opt_model_path = generate_identified_filename(onnx_model_path, "-optimized")
sess_option = SessionOptions()
sess_option.optimized_model_filepath = opt_model_path.as_posix()
_ = InferenceSession(onnx_model_path.as_posix(), sess_option)
print(f"Optimized model has been written at {opt_model_path}: \N{heavy check mark}")
print("/!\\ Optimized model contains hardware specific operators which might not be portable. /!\\")
return opt_model_path
def quantize(onnx_model_path: Path) -> Path:
"""
Quantize the weights of the model from float32 to in8 to allow very efficient inference on modern CPU
Args:
onnx_model_path: Path to location the exported ONNX model is stored
Returns: The Path generated for the quantized
"""
import onnx
from onnxruntime.quantization import QuantizationMode, quantize
onnx_model = onnx.load(onnx_model_path.as_posix())
# Discussed with @yufenglee from ONNX runtime, this will be address in the next release of onnxruntime
print(
"As of onnxruntime 1.4.0, models larger than 2GB will fail to quantize due to protobuf constraint.\n"
"This limitation will be removed in the next release of onnxruntime."
)
quantized_model = quantize(
model=onnx_model,
quantization_mode=QuantizationMode.IntegerOps,
force_fusions=True,
symmetric_weight=True,
)
# Append "-quantized" at the end of the model's name
quantized_model_path = generate_identified_filename(onnx_model_path, "-quantized")
# Save model
print(f"Quantized model has been written at {quantized_model_path}: \N{heavy check mark}")
onnx.save_model(quantized_model, quantized_model_path.as_posix())
return quantized_model_path
def verify(path: Path):
from onnxruntime import InferenceSession, SessionOptions
from onnxruntime.capi.onnxruntime_pybind11_state import RuntimeException
print(f"Checking ONNX model loading from: {path} ...")
try:
onnx_options = SessionOptions()
_ = InferenceSession(path.as_posix(), onnx_options, providers=["CPUExecutionProvider"])
print(f"Model {path} correctly loaded: \N{heavy check mark}")
except RuntimeException as re:
print(f"Error while loading the model {re}: \N{heavy ballot x}")
if __name__ == "__main__":
parser = OnnxConverterArgumentParser()
args = parser.parse_args()
# Make sure output is absolute path
args.output = Path(args.output).absolute()
try:
print("\n====== Converting model to ONNX ======")
# Convert
convert(
args.framework,
args.model,
args.output,
args.opset,
args.tokenizer,
args.use_external_format,
args.pipeline,
)
if args.quantize:
# Ensure requirements for quantization on onnxruntime is met
check_onnxruntime_requirements(ORT_QUANTIZE_MINIMUM_VERSION)
# onnxruntime optimizations doesn't provide the same level of performances on TensorFlow than PyTorch
if args.framework == "tf":
print(
"\t Using TensorFlow might not provide the same optimization level compared to PyTorch.\n"
"\t For TensorFlow users you can try optimizing the model directly through onnxruntime_tools.\n"
"\t For more information, please refer to the onnxruntime documentation:\n"
"\t\thttps://github.com/microsoft/onnxruntime/tree/master/onnxruntime/python/tools/transformers\n"
)
print("\n====== Optimizing ONNX model ======")
# Quantization works best when using the optimized version of the model
args.optimized_output = optimize(args.output)
# Do the quantization on the right graph
args.quantized_output = quantize(args.optimized_output)
# And verify
if args.check_loading:
print("\n====== Check exported ONNX model(s) ======")
verify(args.output)
if hasattr(args, "optimized_output"):
verify(args.optimized_output)
if hasattr(args, "quantized_output"):
verify(args.quantized_output)
except Exception as e:
print(f"Error while converting the model: {e}")
exit(1)
| 19,580 | 35.945283 | 122 | py |
robust-transformers | robust-transformers-main/src/transformers/gcdro_loss.py | import os
import torch
import torch.nn as nn
import torch.distributed as dist
from torch.distributed import ReduceOp
import torch.nn.functional as F
import numpy as np
from dataclasses import dataclass, field
from collections.abc import Mapping
from typing import TYPE_CHECKING, Any, Callable, Dict, List, Optional, Tuple, Union
class GCDROLossComputer:
def __init__(self, dro_args, training_args, n_groups, group_counts, adj=None):
self.is_robust = dro_args.is_robust
self.gamma = dro_args.gamma # ema for group loss
self.alpha = dro_args.alpha # alpha-cover factor
self.min_var_weight = dro_args.min_var_weight
self.step_size = dro_args.step_size
self.normalize_loss = dro_args.normalize_loss
self.btl = dro_args.btl
self.training_args = training_args
self.beta = dro_args.beta
self.beta_ema = dro_args.beta_ema
self.do_instance_reweight = dro_args.do_instance_reweight
## Can we pass these arguments, after computing upon reading the data, and then passing it through training args to Trainer.
self.n_groups = n_groups
self.group_counts = self._prepare_input(group_counts)
self.count_cat = self._prepare_input(torch.ones(self.n_groups).float())
#self.group_frac = self.group_counts/self.group_counts.sum()
#self.group_str = group_str
if adj is not None:
self.adj = self._prepare_input(torch.from_numpy(adj).float())
else:
self.adj = self._prepare_input(torch.zeros(self.n_groups).float())
if dro_args.is_robust:
assert dro_args.alpha, 'alpha must be specified'
# quantities maintained throughout training
self.adv_probs = self._prepare_input(torch.ones(self.n_groups)) #/self.n_groups
self.exp_avg_loss = self._prepare_input(torch.zeros(self.n_groups))
self.group_loss = self._prepare_input(torch.zeros(self.n_groups))
self.exp_avg_initialized = self._prepare_input(torch.zeros(self.n_groups).byte())
# quantities maintained throughout training for instance level G-DRO
self.accum_losses = None
self.reset_stats()
def _prepare_input(self, data: Union[torch.Tensor, Any]) -> Union[torch.Tensor, Any]:
"""
Prepares one `data` before feeding it to the model, be it a tensor or a nested list/dictionary of tensors.
"""
if isinstance(data, Mapping):
return type(data)({k: self._prepare_input(v) for k, v in data.items()})
elif isinstance(data, (tuple, list)):
return type(data)(self._prepare_input(v) for v in data)
elif isinstance(data, torch.Tensor):
kwargs = dict(device=self.training_args.device)
if self.training_args.deepspeed and data.dtype != torch.int64:
# NLP models inputs are int64 and those get adjusted to the right dtype of the
# embedding. Other models such as wav2vec2's inputs are already float and thus
# may need special handling to match the dtypes of the model
kwargs.update(dict(dtype=self.training_args.hf_deepspeed_config.dtype()))
return data.to(**kwargs)
return data
def loss(self, per_sample_losses, yhat, y, group_idx=None, group_distribution=None, instance_weights=None, is_training=False):
# compute per-sample and per-group losses
# per_sample_losses = self.criterion(yhat, y) #TODO: Change, per_sample_loss is already computed.
"""
GC-DRO loss specifics
if "weights" in sample:
ind_loss = ind_loss * sample["weights"]
"""
if instance_weights is not None and self.do_instance_reweight:
per_sample_losses = instance_weights*per_sample_losses
# group_loss, group_count = self.compute_group_avg(per_sample_losses, group_idx)
minibatch_group_acc, minibatch_group_count = self.compute_group_avg((torch.argmax(yhat,1)==y).float(), group_idx)
# update historical losses
group_losses = self.compute_group_loss(per_sample_losses, group_idx)
group_map = (group_idx == self._prepare_input(torch.arange(self.n_groups).unsqueeze(1).long())).float()
group_count = group_map.sum(1)
dist.all_reduce(group_count, op=ReduceOp.SUM)
dist.all_reduce(group_losses, op=ReduceOp.SUM)
group_denom = group_count + (group_count==0).float() # avoid nans
group_losses = (group_losses)/group_denom
self.update_exp_avg_loss(group_losses, group_count)
# compute overall loss
# TODO: create a copy of group losses so that it gets used instead of global group loss?
actual_loss, weights = self.compute_robust_loss_btl(group_losses, group_count)
#import pdb; pdb.set_trace()
# update stats
self.update_stats(actual_loss, group_losses, minibatch_group_acc, minibatch_group_count, weights)
return actual_loss
def compute_group_loss(self, losses, group_idx):
group_map = (group_idx == self._prepare_input(torch.arange(self.n_groups).unsqueeze(1).long())).float()
group_loss = (group_map @ losses.view(-1))
return group_loss
def compute_robust_loss_btl(self, group_loss, group_count):
adjusted_loss = self.exp_avg_loss + self.adj/torch.sqrt(self.group_counts)
return self.compute_robust_loss_greedy(group_loss, adjusted_loss)
def compute_robust_loss_greedy(self, group_loss, ref_loss):
sorted_idx = ref_loss.sort(descending=True)[1]
#sorted_loss = group_loss[sorted_idx]
past_frac = self.count_cat / self.count_cat.sum()
sorted_frac = past_frac[sorted_idx]
"""
mask = torch.cumsum(sorted_frac, dim=0)<=self.alpha
self.adv_probs = mask.float() * sorted_frac /self.alpha
last_idx = mask.sum()
self.adv_probs[last_idx] = 1 - self.adv_probs.sum()
self.adv_probs = sorted_frac*self.min_var_weight + self.adv_probs*(1-self.min_var_weight)
"""
## Chunting's code verison of greedy alpha-cover upweighting.
cutoff_count = torch.sum(torch.cumsum(sorted_frac, 0) < self.alpha)
if cutoff_count == len(sorted_frac):
cutoff_count = len(sorted_frac) - 1
self.adv_probs= self.adv_probs.new_full(self.adv_probs.size(), self.min_var_weight)
self.adv_probs[sorted_idx[:cutoff_count]] = 1.0 / self.alpha
leftover_mass = 1.0 - sorted_frac[:cutoff_count].sum().div(self.alpha)
tiebreak_fraction = leftover_mass / sorted_frac[cutoff_count] # check!
self.adv_probs[sorted_idx[cutoff_count]] = tiebreak_fraction
robust_loss = group_loss @ self.adv_probs
# sort the weights back
# _, unsort_idx = sorted_idx.sort()
# unsorted_weights = weights[unsort_idx]
# update class objects for logging in trainer_dro
self.group_loss = group_loss
#self.adv_probs = weights
return robust_loss, self.adv_probs
def compute_group_avg(self, losses, group_idx):
# compute observed counts and mean loss for each group
group_map = (group_idx == self._prepare_input(torch.arange(self.n_groups).unsqueeze(1).long())).float()
group_count = group_map.sum(1)
group_denom = group_count + (group_count==0).float() # avoid nans
group_loss = (group_map @ losses.view(-1))/group_denom
return group_loss, group_count
def update_exp_avg_loss(self, group_loss, group_count):
## TODO: Chunting's code is doing a different kind of exponential averaging, exp_avf_initialized not used.
prev_weights = (1 - self.gamma*(group_count>0).float()) * (self.exp_avg_initialized>0).float()
curr_weights = 1 - prev_weights
self.exp_avg_loss = self.exp_avg_loss * prev_weights + group_loss*curr_weights
## TODO: Chunting's code is also doing an exponential averaging of counts (with alpha 0.05)
self.count_cat = self.count_cat.mul(1 - 0.05).add(group_count, alpha=0.05)
self.exp_avg_initialized = (self.exp_avg_initialized>0) + (group_count>0)
def reset_stats(self):
self.processed_data_counts = self._prepare_input(torch.zeros(self.n_groups))
self.update_data_counts = self._prepare_input(torch.zeros(self.n_groups))
self.update_batch_counts = self._prepare_input(torch.zeros(self.n_groups))
self.avg_group_loss = self._prepare_input(torch.zeros(self.n_groups))
self.avg_group_acc = self._prepare_input(torch.zeros(self.n_groups))
self.avg_per_sample_loss = 0.
self.avg_actual_loss = 0.
self.avg_acc = 0.
self.batch_count = 0.
#TODO: Chunting also sets weights to 1 here, and self.exp_avg_loss to 0
self.exp_avg_loss.fill_(0.)
self.adv_probs.fill_(1.)
def update_stats(self, actual_loss, group_loss, group_acc, group_count, weights=None):
# avg group loss
denom = self.processed_data_counts + group_count
denom += (denom==0).float()
prev_weight = self.processed_data_counts/denom
curr_weight = group_count/denom
self.avg_group_loss = prev_weight*self.avg_group_loss + curr_weight*group_loss
# avg group acc
self.avg_group_acc = prev_weight*self.avg_group_acc + curr_weight*group_acc
# batch-wise average actual loss
denom = self.batch_count + 1
self.avg_actual_loss = (self.batch_count/denom)*self.avg_actual_loss + (1/denom)*actual_loss
# counts
self.processed_data_counts += group_count
if self.is_robust:
self.update_data_counts += group_count*((weights>0).float())
self.update_batch_counts += ((group_count*weights)>0).float()
else:
self.update_data_counts += group_count
self.update_batch_counts += (group_count>0).float()
self.batch_count+=1
# avg per-sample quantities
group_frac = self.processed_data_counts/(self.processed_data_counts.sum())
self.avg_per_sample_loss = group_frac @ self.avg_group_loss
self.avg_acc = group_frac @ self.avg_group_acc
def get_model_stats(self, model, args, stats_dict):
model_norm_sq = 0.
for param in model.parameters():
model_norm_sq += torch.norm(param) ** 2
stats_dict['model_norm_sq'] = model_norm_sq.item()
stats_dict['reg_loss'] = args.weight_decay / 2 * model_norm_sq.item()
return stats_dict
def get_stats(self, model=None, args=None):
stats_dict = {}
for idx in range(self.n_groups):
stats_dict[f'avg_loss_group:{idx}'] = self.avg_group_loss[idx].item()
stats_dict[f'exp_avg_loss_group:{idx}'] = self.exp_avg_loss[idx].item()
stats_dict[f'avg_acc_group:{idx}'] = self.avg_group_acc[idx].item()
stats_dict[f'processed_data_count_group:{idx}'] = self.processed_data_counts[idx].item()
stats_dict[f'update_data_count_group:{idx}'] = self.update_data_counts[idx].item()
stats_dict[f'update_batch_count_group:{idx}'] = self.update_batch_counts[idx].item()
stats_dict['avg_actual_loss'] = self.avg_actual_loss.item()
stats_dict['avg_per_sample_loss'] = self.avg_per_sample_loss.item()
stats_dict['avg_acc'] = self.avg_acc.item()
# Model stats
if model is not None:
assert args is not None
stats_dict = self.get_model_stats(model, args, stats_dict)
return stats_dict
def log_stats(self, logger, is_training):
if logger is None:
return
logger.info(f'Average incurred loss: {self.avg_per_sample_loss.item():.3f} \n')
logger.info(f'Average sample loss: {self.avg_actual_loss.item():.3f} \n')
logger.info(f'Average acc: {self.avg_acc.item():.3f} \n')
for group_idx in range(self.n_groups):
logger.info(
# f' {self.group_str(group_idx)} '
f'[n = {int(self.processed_data_counts[group_idx])}]:\t'
f'loss = {self.avg_group_loss[group_idx]:.3f} '
f'exp loss = {self.exp_avg_loss[group_idx]:.3f} '
f'adjusted loss = {self.exp_avg_loss[group_idx] + self.adj[group_idx]/torch.sqrt(self.group_counts)[group_idx]:.3f} '
f'adv prob = {self.adv_probs[group_idx]:3f} '
f'acc = {self.avg_group_acc[group_idx]:.3f}\n')
# logger.flush()
def compute_beta_cover(self, seed, epoch, dataset, losses=None):
split_array = np.array([item["group"] for item in dataset])
total = len(split_array)
if losses is not None:
if self.accum_losses is None:
self.accum_losses = losses
else:
self.accum_losses = self.accum_losses * (1 - self.beta_ema) + losses * self.beta_ema
for gidx in range(self.n_groups):
select_idx = np.where(split_array == gidx)[0]
count = len(select_idx)
idx_sorted = np.argsort(self.accum_losses[select_idx])
idx = select_idx[idx_sorted][::-1]
cutoff_count = int((total - count) * count * self.beta / (total - count * self.beta))
self.weight_array[idx] = count / total
self.weight_array[idx[:cutoff_count]] = 1.0 / self.beta
else:
self.weight_array = np.ones(total)
return self.weight_array
| 13,580 | 46.15625 | 134 | py |
robust-transformers | robust-transformers-main/src/transformers/tokenization_utils_base.py | # coding=utf-8
# Copyright 2020 The HuggingFace Inc. team.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
"""
Base classes common to both the slow and the fast tokenization classes: PreTrainedTokenizerBase (host all the user
fronting encoding methods) Special token mixing (host the special tokens logic) and BatchEncoding (wrap the dictionary
of output with special method for the Fast tokenizers)
"""
import copy
import json
import os
import re
import warnings
from collections import OrderedDict, UserDict
from contextlib import contextmanager
from dataclasses import dataclass, field
from typing import TYPE_CHECKING, Any, Dict, List, NamedTuple, Optional, Sequence, Tuple, Union
import numpy as np
from packaging import version
from requests import HTTPError
from . import __version__
from .dynamic_module_utils import custom_object_save
from .file_utils import (
EntryNotFoundError,
ExplicitEnum,
PaddingStrategy,
PushToHubMixin,
RepositoryNotFoundError,
RevisionNotFoundError,
TensorType,
_is_jax,
_is_numpy,
_is_tensorflow,
_is_torch,
_is_torch_device,
add_end_docstrings,
cached_path,
copy_func,
get_file_from_repo,
hf_bucket_url,
is_flax_available,
is_offline_mode,
is_remote_url,
is_tf_available,
is_tokenizers_available,
is_torch_available,
to_py_obj,
torch_required,
)
from .utils import logging
if TYPE_CHECKING:
if is_torch_available():
import torch
if is_tf_available():
import tensorflow as tf
if is_flax_available():
import jax.numpy as jnp # noqa: F401
if is_tokenizers_available():
from tokenizers import AddedToken
from tokenizers import Encoding as EncodingFast
else:
@dataclass(frozen=True, eq=True)
class AddedToken:
"""
AddedToken represents a token to be added to a Tokenizer An AddedToken can have special options defining the
way it should behave.
"""
content: str = field(default_factory=str)
single_word: bool = False
lstrip: bool = False
rstrip: bool = False
normalized: bool = True
def __getstate__(self):
return self.__dict__
@dataclass
class EncodingFast:
"""This is dummy class because without the `tokenizers` library we don't have these objects anyway"""
pass
logger = logging.get_logger(__name__)
VERY_LARGE_INTEGER = int(1e30) # This is used to set the max input length for a model with infinite size input
LARGE_INTEGER = int(1e20) # This is used when we need something big but slightly smaller than VERY_LARGE_INTEGER
# Define type aliases and NamedTuples
TextInput = str
PreTokenizedInput = List[str]
EncodedInput = List[int]
TextInputPair = Tuple[str, str]
PreTokenizedInputPair = Tuple[List[str], List[str]]
EncodedInputPair = Tuple[List[int], List[int]]
# Slow tokenizers used to be saved in three separated files
SPECIAL_TOKENS_MAP_FILE = "special_tokens_map.json"
ADDED_TOKENS_FILE = "added_tokens.json"
TOKENIZER_CONFIG_FILE = "tokenizer_config.json"
# Fast tokenizers (provided by HuggingFace tokenizer's library) can be saved in a single file
FULL_TOKENIZER_FILE = "tokenizer.json"
_re_tokenizer_file = re.compile(r"tokenizer\.(.*)\.json")
class TruncationStrategy(ExplicitEnum):
"""
Possible values for the `truncation` argument in [`PreTrainedTokenizerBase.__call__`]. Useful for tab-completion in
an IDE.
"""
ONLY_FIRST = "only_first"
ONLY_SECOND = "only_second"
LONGEST_FIRST = "longest_first"
DO_NOT_TRUNCATE = "do_not_truncate"
class CharSpan(NamedTuple):
"""
Character span in the original string.
Args:
start (`int`): Index of the first character in the original string.
end (`int`): Index of the character following the last character in the original string.
"""
start: int
end: int
class TokenSpan(NamedTuple):
"""
Token span in an encoded string (list of tokens).
Args:
start (`int`): Index of the first token in the span.
end (`int`): Index of the token following the last token in the span.
"""
start: int
end: int
class BatchEncoding(UserDict):
"""
Holds the output of the [`~tokenization_utils_base.PreTrainedTokenizerBase.encode_plus`] and
[`~tokenization_utils_base.PreTrainedTokenizerBase.batch_encode`] methods (tokens, attention_masks, etc).
This class is derived from a python dictionary and can be used as a dictionary. In addition, this class exposes
utility methods to map from word/character space to token space.
Args:
data (`dict`):
Dictionary of lists/arrays/tensors returned by the encode/batch_encode methods ('input_ids',
'attention_mask', etc.).
encoding (`tokenizers.Encoding` or `Sequence[tokenizers.Encoding]`, *optional*):
If the tokenizer is a fast tokenizer which outputs additional information like mapping from word/character
space to token space the `tokenizers.Encoding` instance or list of instance (for batches) hold this
information.
tensor_type (`Union[None, str, TensorType]`, *optional*):
You can give a tensor_type here to convert the lists of integers in PyTorch/TensorFlow/Numpy Tensors at
initialization.
prepend_batch_axis (`bool`, *optional*, defaults to `False`):
Whether or not to add a batch axis when converting to tensors (see `tensor_type` above).
n_sequences (`Optional[int]`, *optional*):
You can give a tensor_type here to convert the lists of integers in PyTorch/TensorFlow/Numpy Tensors at
initialization.
"""
def __init__(
self,
data: Optional[Dict[str, Any]] = None,
encoding: Optional[Union[EncodingFast, Sequence[EncodingFast]]] = None,
tensor_type: Union[None, str, TensorType] = None,
prepend_batch_axis: bool = False,
n_sequences: Optional[int] = None,
):
super().__init__(data)
if isinstance(encoding, EncodingFast):
encoding = [encoding]
self._encodings = encoding
if n_sequences is None and encoding is not None and len(encoding):
n_sequences = encoding[0].n_sequences
self._n_sequences = n_sequences
self.convert_to_tensors(tensor_type=tensor_type, prepend_batch_axis=prepend_batch_axis)
@property
def n_sequences(self) -> Optional[int]:
"""
`Optional[int]`: The number of sequences used to generate each sample from the batch encoded in this
[`BatchEncoding`]. Currently can be one of `None` (unknown), `1` (a single sentence) or `2` (a pair of
sentences)
"""
return self._n_sequences
@property
def is_fast(self) -> bool:
"""
`bool`: Indicate whether this [`BatchEncoding`] was generated from the result of a [`PreTrainedTokenizerFast`]
or not.
"""
return self._encodings is not None
def __getitem__(self, item: Union[int, str]) -> Union[Any, EncodingFast]:
"""
If the key is a string, returns the value of the dict associated to `key` ('input_ids', 'attention_mask',
etc.).
If the key is an integer, get the `tokenizers.Encoding` for batch item with index `key`.
"""
if isinstance(item, str):
return self.data[item]
elif self._encodings is not None:
return self._encodings[item]
else:
raise KeyError(
"Indexing with integers (to access backend Encoding for a given batch index) "
"is not available when using Python based tokenizers"
)
def __getattr__(self, item: str):
try:
return self.data[item]
except KeyError:
raise AttributeError
def __getstate__(self):
return {"data": self.data, "encodings": self._encodings}
def __setstate__(self, state):
if "data" in state:
self.data = state["data"]
if "encodings" in state:
self._encodings = state["encodings"]
def keys(self):
return self.data.keys()
def values(self):
return self.data.values()
def items(self):
return self.data.items()
# After this point:
# Extended properties and methods only available for fast (Rust-based) tokenizers
# provided by HuggingFace tokenizers library.
@property
def encodings(self) -> Optional[List[EncodingFast]]:
"""
`Optional[List[tokenizers.Encoding]]`: The list all encodings from the tokenization process. Returns `None` if
the input was tokenized through Python (i.e., not a fast) tokenizer.
"""
return self._encodings
def tokens(self, batch_index: int = 0) -> List[str]:
"""
Return the list of tokens (sub-parts of the input strings after word/subword splitting and before conversion to
integer indices) at a given batch index (only works for the output of a fast tokenizer).
Args:
batch_index (`int`, *optional*, defaults to 0): The index to access in the batch.
Returns:
`List[str]`: The list of tokens at that index.
"""
if not self._encodings:
raise ValueError("tokens() is not available when using Python-based tokenizers")
return self._encodings[batch_index].tokens
def sequence_ids(self, batch_index: int = 0) -> List[Optional[int]]:
"""
Return a list mapping the tokens to the id of their original sentences:
- `None` for special tokens added around or between sequences,
- `0` for tokens corresponding to words in the first sequence,
- `1` for tokens corresponding to words in the second sequence when a pair of sequences was jointly
encoded.
Args:
batch_index (`int`, *optional*, defaults to 0): The index to access in the batch.
Returns:
`List[Optional[int]]`: A list indicating the sequence id corresponding to each token. Special tokens added
by the tokenizer are mapped to `None` and other tokens are mapped to the index of their corresponding
sequence.
"""
if not self._encodings:
raise ValueError("sequence_ids() is not available when using Python-based tokenizers")
return self._encodings[batch_index].sequence_ids
def words(self, batch_index: int = 0) -> List[Optional[int]]:
"""
Return a list mapping the tokens to their actual word in the initial sentence for a fast tokenizer.
Args:
batch_index (`int`, *optional*, defaults to 0): The index to access in the batch.
Returns:
`List[Optional[int]]`: A list indicating the word corresponding to each token. Special tokens added by the
tokenizer are mapped to `None` and other tokens are mapped to the index of their corresponding word
(several tokens will be mapped to the same word index if they are parts of that word).
"""
if not self._encodings:
raise ValueError("words() is not available when using Python-based tokenizers")
warnings.warn(
"`BatchEncoding.words()` property is deprecated and should be replaced with the identical, "
"but more self-explanatory `BatchEncoding.word_ids()` property.",
FutureWarning,
)
return self.word_ids(batch_index)
def word_ids(self, batch_index: int = 0) -> List[Optional[int]]:
"""
Return a list mapping the tokens to their actual word in the initial sentence for a fast tokenizer.
Args:
batch_index (`int`, *optional*, defaults to 0): The index to access in the batch.
Returns:
`List[Optional[int]]`: A list indicating the word corresponding to each token. Special tokens added by the
tokenizer are mapped to `None` and other tokens are mapped to the index of their corresponding word
(several tokens will be mapped to the same word index if they are parts of that word).
"""
if not self._encodings:
raise ValueError("word_ids() is not available when using Python-based tokenizers")
return self._encodings[batch_index].word_ids
def token_to_sequence(self, batch_or_token_index: int, token_index: Optional[int] = None) -> int:
"""
Get the index of the sequence represented by the given token. In the general use case, this method returns `0`
for a single sequence or the first sequence of a pair, and `1` for the second sequence of a pair
Can be called as:
- `self.token_to_sequence(token_index)` if batch size is 1
- `self.token_to_sequence(batch_index, token_index)` if batch size is greater than 1
This method is particularly suited when the input sequences are provided as pre-tokenized sequences (i.e.,
words are defined by the user). In this case it allows to easily associate encoded tokens with provided
tokenized words.
Args:
batch_or_token_index (`int`):
Index of the sequence in the batch. If the batch only comprises one sequence, this can be the index of
the token in the sequence.
token_index (`int`, *optional*):
If a batch index is provided in *batch_or_token_index*, this can be the index of the token in the
sequence.
Returns:
`int`: Index of the word in the input sequence.
"""
if not self._encodings:
raise ValueError("token_to_sequence() is not available when using Python based tokenizers")
if token_index is not None:
batch_index = batch_or_token_index
else:
batch_index = 0
token_index = batch_or_token_index
if batch_index < 0:
batch_index = self._batch_size + batch_index
if token_index < 0:
token_index = self._seq_len + token_index
return self._encodings[batch_index].token_to_sequence(token_index)
def token_to_word(self, batch_or_token_index: int, token_index: Optional[int] = None) -> int:
"""
Get the index of the word corresponding (i.e. comprising) to an encoded token in a sequence of the batch.
Can be called as:
- `self.token_to_word(token_index)` if batch size is 1
- `self.token_to_word(batch_index, token_index)` if batch size is greater than 1
This method is particularly suited when the input sequences are provided as pre-tokenized sequences (i.e.,
words are defined by the user). In this case it allows to easily associate encoded tokens with provided
tokenized words.
Args:
batch_or_token_index (`int`):
Index of the sequence in the batch. If the batch only comprise one sequence, this can be the index of
the token in the sequence.
token_index (`int`, *optional*):
If a batch index is provided in *batch_or_token_index*, this can be the index of the token in the
sequence.
Returns:
`int`: Index of the word in the input sequence.
"""
if not self._encodings:
raise ValueError("token_to_word() is not available when using Python based tokenizers")
if token_index is not None:
batch_index = batch_or_token_index
else:
batch_index = 0
token_index = batch_or_token_index
if batch_index < 0:
batch_index = self._batch_size + batch_index
if token_index < 0:
token_index = self._seq_len + token_index
return self._encodings[batch_index].token_to_word(token_index)
def word_to_tokens(
self, batch_or_word_index: int, word_index: Optional[int] = None, sequence_index: int = 0
) -> Optional[TokenSpan]:
"""
Get the encoded token span corresponding to a word in a sequence of the batch.
Token spans are returned as a [`~tokenization_utils_base.TokenSpan`] with:
- **start** -- Index of the first token.
- **end** -- Index of the token following the last token.
Can be called as:
- `self.word_to_tokens(word_index, sequence_index: int = 0)` if batch size is 1
- `self.word_to_tokens(batch_index, word_index, sequence_index: int = 0)` if batch size is greater or equal to
1
This method is particularly suited when the input sequences are provided as pre-tokenized sequences (i.e. words
are defined by the user). In this case it allows to easily associate encoded tokens with provided tokenized
words.
Args:
batch_or_word_index (`int`):
Index of the sequence in the batch. If the batch only comprises one sequence, this can be the index of
the word in the sequence.
word_index (`int`, *optional*):
If a batch index is provided in *batch_or_token_index*, this can be the index of the word in the
sequence.
sequence_index (`int`, *optional*, defaults to 0):
If pair of sequences are encoded in the batch this can be used to specify which sequence in the pair (0
or 1) the provided word index belongs to.
Returns:
Optional [`~tokenization_utils_base.TokenSpan`] Span of tokens in the encoded sequence. Returns `None` if
no tokens correspond to the word.
"""
if not self._encodings:
raise ValueError("word_to_tokens() is not available when using Python based tokenizers")
if word_index is not None:
batch_index = batch_or_word_index
else:
batch_index = 0
word_index = batch_or_word_index
if batch_index < 0:
batch_index = self._batch_size + batch_index
if word_index < 0:
word_index = self._seq_len + word_index
span = self._encodings[batch_index].word_to_tokens(word_index, sequence_index)
return TokenSpan(*span) if span is not None else None
def token_to_chars(self, batch_or_token_index: int, token_index: Optional[int] = None) -> CharSpan:
"""
Get the character span corresponding to an encoded token in a sequence of the batch.
Character spans are returned as a [`~tokenization_utils_base.CharSpan`] with:
- **start** -- Index of the first character in the original string associated to the token.
- **end** -- Index of the character following the last character in the original string associated to the
token.
Can be called as:
- `self.token_to_chars(token_index)` if batch size is 1
- `self.token_to_chars(batch_index, token_index)` if batch size is greater or equal to 1
Args:
batch_or_token_index (`int`):
Index of the sequence in the batch. If the batch only comprise one sequence, this can be the index of
the token in the sequence.
token_index (`int`, *optional*):
If a batch index is provided in *batch_or_token_index*, this can be the index of the token or tokens in
the sequence.
Returns:
[`~tokenization_utils_base.CharSpan`]: Span of characters in the original string.
"""
if not self._encodings:
raise ValueError("token_to_chars() is not available when using Python based tokenizers")
if token_index is not None:
batch_index = batch_or_token_index
else:
batch_index = 0
token_index = batch_or_token_index
return CharSpan(*(self._encodings[batch_index].token_to_chars(token_index)))
def char_to_token(
self, batch_or_char_index: int, char_index: Optional[int] = None, sequence_index: int = 0
) -> int:
"""
Get the index of the token in the encoded output comprising a character in the original string for a sequence
of the batch.
Can be called as:
- `self.char_to_token(char_index)` if batch size is 1
- `self.char_to_token(batch_index, char_index)` if batch size is greater or equal to 1
This method is particularly suited when the input sequences are provided as pre-tokenized sequences (i.e. words
are defined by the user). In this case it allows to easily associate encoded tokens with provided tokenized
words.
Args:
batch_or_char_index (`int`):
Index of the sequence in the batch. If the batch only comprise one sequence, this can be the index of
the word in the sequence
char_index (`int`, *optional*):
If a batch index is provided in *batch_or_token_index*, this can be the index of the word in the
sequence.
sequence_index (`int`, *optional*, defaults to 0):
If pair of sequences are encoded in the batch this can be used to specify which sequence in the pair (0
or 1) the provided character index belongs to.
Returns:
`int`: Index of the token.
"""
if not self._encodings:
raise ValueError("char_to_token() is not available when using Python based tokenizers")
if char_index is not None:
batch_index = batch_or_char_index
else:
batch_index = 0
char_index = batch_or_char_index
return self._encodings[batch_index].char_to_token(char_index, sequence_index)
def word_to_chars(
self, batch_or_word_index: int, word_index: Optional[int] = None, sequence_index: int = 0
) -> CharSpan:
"""
Get the character span in the original string corresponding to given word in a sequence of the batch.
Character spans are returned as a CharSpan NamedTuple with:
- start: index of the first character in the original string
- end: index of the character following the last character in the original string
Can be called as:
- `self.word_to_chars(word_index)` if batch size is 1
- `self.word_to_chars(batch_index, word_index)` if batch size is greater or equal to 1
Args:
batch_or_word_index (`int`):
Index of the sequence in the batch. If the batch only comprise one sequence, this can be the index of
the word in the sequence
word_index (`int`, *optional*):
If a batch index is provided in *batch_or_token_index*, this can be the index of the word in the
sequence.
sequence_index (`int`, *optional*, defaults to 0):
If pair of sequences are encoded in the batch this can be used to specify which sequence in the pair (0
or 1) the provided word index belongs to.
Returns:
`CharSpan` or `List[CharSpan]`: Span(s) of the associated character or characters in the string. CharSpan
are NamedTuple with:
- start: index of the first character associated to the token in the original string
- end: index of the character following the last character associated to the token in the original
string
"""
if not self._encodings:
raise ValueError("word_to_chars() is not available when using Python based tokenizers")
if word_index is not None:
batch_index = batch_or_word_index
else:
batch_index = 0
word_index = batch_or_word_index
return CharSpan(*(self._encodings[batch_index].word_to_chars(word_index, sequence_index)))
def char_to_word(self, batch_or_char_index: int, char_index: Optional[int] = None, sequence_index: int = 0) -> int:
"""
Get the word in the original string corresponding to a character in the original string of a sequence of the
batch.
Can be called as:
- `self.char_to_word(char_index)` if batch size is 1
- `self.char_to_word(batch_index, char_index)` if batch size is greater than 1
This method is particularly suited when the input sequences are provided as pre-tokenized sequences (i.e. words
are defined by the user). In this case it allows to easily associate encoded tokens with provided tokenized
words.
Args:
batch_or_char_index (`int`):
Index of the sequence in the batch. If the batch only comprise one sequence, this can be the index of
the character in the original string.
char_index (`int`, *optional*):
If a batch index is provided in *batch_or_token_index*, this can be the index of the character in the
original string.
sequence_index (`int`, *optional*, defaults to 0):
If pair of sequences are encoded in the batch this can be used to specify which sequence in the pair (0
or 1) the provided character index belongs to.
Returns:
`int` or `List[int]`: Index or indices of the associated encoded token(s).
"""
if not self._encodings:
raise ValueError("char_to_word() is not available when using Python based tokenizers")
if char_index is not None:
batch_index = batch_or_char_index
else:
batch_index = 0
char_index = batch_or_char_index
return self._encodings[batch_index].char_to_word(char_index, sequence_index)
def convert_to_tensors(
self, tensor_type: Optional[Union[str, TensorType]] = None, prepend_batch_axis: bool = False
):
"""
Convert the inner content to tensors.
Args:
tensor_type (`str` or [`~file_utils.TensorType`], *optional*):
The type of tensors to use. If `str`, should be one of the values of the enum
[`~file_utils.TensorType`]. If `None`, no modification is done.
prepend_batch_axis (`int`, *optional*, defaults to `False`):
Whether or not to add the batch dimension during the conversion.
"""
if tensor_type is None:
return self
# Convert to TensorType
if not isinstance(tensor_type, TensorType):
tensor_type = TensorType(tensor_type)
# Get a function reference for the correct framework
if tensor_type == TensorType.TENSORFLOW:
if not is_tf_available():
raise ImportError(
"Unable to convert output to TensorFlow tensors format, TensorFlow is not installed."
)
import tensorflow as tf
as_tensor = tf.constant
is_tensor = tf.is_tensor
elif tensor_type == TensorType.PYTORCH:
if not is_torch_available():
raise ImportError("Unable to convert output to PyTorch tensors format, PyTorch is not installed.")
import torch
as_tensor = torch.tensor
is_tensor = torch.is_tensor
elif tensor_type == TensorType.JAX:
if not is_flax_available():
raise ImportError("Unable to convert output to JAX tensors format, JAX is not installed.")
import jax.numpy as jnp # noqa: F811
as_tensor = jnp.array
is_tensor = _is_jax
else:
as_tensor = np.asarray
is_tensor = _is_numpy
# (mfuntowicz: This code is unreachable)
# else:
# raise ImportError(
# f"Unable to convert output to tensors format {tensor_type}"
# )
# Do the tensor conversion in batch
for key, value in self.items():
try:
if prepend_batch_axis:
value = [value]
if not is_tensor(value):
tensor = as_tensor(value)
# Removing this for now in favor of controlling the shape with `prepend_batch_axis`
# # at-least2d
# if tensor.ndim > 2:
# tensor = tensor.squeeze(0)
# elif tensor.ndim < 2:
# tensor = tensor[None, :]
self[key] = tensor
except: # noqa E722
if key == "overflowing_tokens":
raise ValueError(
"Unable to create tensor returning overflowing tokens of different lengths. "
"Please see if a fast version of this tokenizer is available to have this feature available."
)
raise ValueError(
"Unable to create tensor, you should probably activate truncation and/or padding "
"with 'padding=True' 'truncation=True' to have batched tensors with the same length."
)
return self
@torch_required
def to(self, device: Union[str, "torch.device"]) -> "BatchEncoding":
"""
Send all values to device by calling `v.to(device)` (PyTorch only).
Args:
device (`str` or `torch.device`): The device to put the tensors on.
Returns:
[`BatchEncoding`]: The same instance after modification.
"""
# This check catches things like APEX blindly calling "to" on all inputs to a module
# Otherwise it passes the casts down and casts the LongTensor containing the token idxs
# into a HalfTensor
if isinstance(device, str) or _is_torch_device(device) or isinstance(device, int):
self.data = {k: v.to(device=device) for k, v in self.data.items()}
else:
logger.warning(f"Attempting to cast a BatchEncoding to type {str(device)}. This is not supported.")
return self
class SpecialTokensMixin:
"""
A mixin derived by [`PreTrainedTokenizer`] and [`PreTrainedTokenizerFast`] to handle specific behaviors related to
special tokens. In particular, this class hold the attributes which can be used to directly access these special
tokens in a model-independent manner and allow to set and update the special tokens.
Args:
bos_token (`str` or `tokenizers.AddedToken`, *optional*):
A special token representing the beginning of a sentence.
eos_token (`str` or `tokenizers.AddedToken`, *optional*):
A special token representing the end of a sentence.
unk_token (`str` or `tokenizers.AddedToken`, *optional*):
A special token representing an out-of-vocabulary token.
sep_token (`str` or `tokenizers.AddedToken`, *optional*):
A special token separating two different sentences in the same input (used by BERT for instance).
pad_token (`str` or `tokenizers.AddedToken`, *optional*):
A special token used to make arrays of tokens the same size for batching purpose. Will then be ignored by
attention mechanisms or loss computation.
cls_token (`str` or `tokenizers.AddedToken`, *optional*):
A special token representing the class of the input (used by BERT for instance).
mask_token (`str` or `tokenizers.AddedToken`, *optional*):
A special token representing a masked token (used by masked-language modeling pretraining objectives, like
BERT).
additional_special_tokens (tuple or list of `str` or `tokenizers.AddedToken`, *optional*):
A tuple or a list of additional special tokens.
"""
SPECIAL_TOKENS_ATTRIBUTES = [
"bos_token",
"eos_token",
"unk_token",
"sep_token",
"pad_token",
"cls_token",
"mask_token",
"additional_special_tokens",
]
def __init__(self, verbose=True, **kwargs):
self._bos_token = None
self._eos_token = None
self._unk_token = None
self._sep_token = None
self._pad_token = None
self._cls_token = None
self._mask_token = None
self._pad_token_type_id = 0
self._additional_special_tokens = []
self.verbose = verbose
# We directly set the hidden value to allow initialization with special tokens
# which are not yet in the vocabulary. Necessary for serialization/de-serialization
# TODO clean this up at some point (probably by switching to fast tokenizers)
for key, value in kwargs.items():
if value is None:
continue
if key in self.SPECIAL_TOKENS_ATTRIBUTES:
if key == "additional_special_tokens":
assert isinstance(value, (list, tuple)), f"Value {value} is not a list or tuple"
assert all(
isinstance(t, (str, AddedToken)) for t in value
), "One of the tokens is not a string or an AddedToken"
setattr(self, key, value)
elif isinstance(value, (str, AddedToken)):
setattr(self, key, value)
else:
raise TypeError(f"special token {key} has to be either str or AddedToken but got: {type(value)}")
def sanitize_special_tokens(self) -> int:
"""
Make sure that all the special tokens attributes of the tokenizer (`tokenizer.mask_token`,
`tokenizer.cls_token`, etc.) are in the vocabulary.
Add the missing ones to the vocabulary if needed.
Return:
`int`: The number of tokens added in the vocabulary during the operation.
"""
return self.add_tokens(self.all_special_tokens_extended, special_tokens=True)
def add_special_tokens(self, special_tokens_dict: Dict[str, Union[str, AddedToken]]) -> int:
"""
Add a dictionary of special tokens (eos, pad, cls, etc.) to the encoder and link them to class attributes. If
special tokens are NOT in the vocabulary, they are added to it (indexed starting from the last index of the
current vocabulary).
Note,None When adding new tokens to the vocabulary, you should make sure to also resize the token embedding
matrix of the model so that its embedding matrix matches the tokenizer.
In order to do that, please use the [`~PreTrainedModel.resize_token_embeddings`] method.
Using `add_special_tokens` will ensure your special tokens can be used in several ways:
- Special tokens are carefully handled by the tokenizer (they are never split).
- You can easily refer to special tokens using tokenizer class attributes like `tokenizer.cls_token`. This
makes it easy to develop model-agnostic training and fine-tuning scripts.
When possible, special tokens are already registered for provided pretrained models (for instance
[`BertTokenizer`] `cls_token` is already registered to be :obj*'[CLS]'* and XLM's one is also registered to be
`'</s>'`).
Args:
special_tokens_dict (dictionary *str* to *str* or `tokenizers.AddedToken`):
Keys should be in the list of predefined special attributes: [`bos_token`, `eos_token`, `unk_token`,
`sep_token`, `pad_token`, `cls_token`, `mask_token`, `additional_special_tokens`].
Tokens are only added if they are not already in the vocabulary (tested by checking if the tokenizer
assign the index of the `unk_token` to them).
Returns:
`int`: Number of tokens added to the vocabulary.
Examples:
```python
# Let's see how to add a new classification token to GPT-2
tokenizer = GPT2Tokenizer.from_pretrained("gpt2")
model = GPT2Model.from_pretrained("gpt2")
special_tokens_dict = {"cls_token": "<CLS>"}
num_added_toks = tokenizer.add_special_tokens(special_tokens_dict)
print("We have added", num_added_toks, "tokens")
# Notice: resize_token_embeddings expect to receive the full size of the new vocabulary, i.e., the length of the tokenizer.
model.resize_token_embeddings(len(tokenizer))
assert tokenizer.cls_token == "<CLS>"
```"""
if not special_tokens_dict:
return 0
added_tokens = 0
for key, value in special_tokens_dict.items():
assert key in self.SPECIAL_TOKENS_ATTRIBUTES, f"Key {key} is not a special token"
if self.verbose:
logger.info(f"Assigning {value} to the {key} key of the tokenizer")
setattr(self, key, value)
if key == "additional_special_tokens":
assert isinstance(value, (list, tuple)) and all(
isinstance(t, (str, AddedToken)) for t in value
), f"Tokens {value} for key {key} should all be str or AddedToken instances"
added_tokens += self.add_tokens(value, special_tokens=True)
else:
assert isinstance(
value, (str, AddedToken)
), f"Token {value} for key {key} should be a str or an AddedToken instance"
added_tokens += self.add_tokens([value], special_tokens=True)
return added_tokens
def add_tokens(
self, new_tokens: Union[str, AddedToken, List[Union[str, AddedToken]]], special_tokens: bool = False
) -> int:
"""
Add a list of new tokens to the tokenizer class. If the new tokens are not in the vocabulary, they are added to
it with indices starting from length of the current vocabulary.
Note,None When adding new tokens to the vocabulary, you should make sure to also resize the token embedding
matrix of the model so that its embedding matrix matches the tokenizer.
In order to do that, please use the [`~PreTrainedModel.resize_token_embeddings`] method.
Args:
new_tokens (`str`, `tokenizers.AddedToken` or a list of *str* or `tokenizers.AddedToken`):
Tokens are only added if they are not already in the vocabulary. `tokenizers.AddedToken` wraps a string
token to let you personalize its behavior: whether this token should only match against a single word,
whether this token should strip all potential whitespaces on the left side, whether this token should
strip all potential whitespaces on the right side, etc.
special_tokens (`bool`, *optional*, defaults to `False`):
Can be used to specify if the token is a special token. This mostly change the normalization behavior
(special tokens like CLS or [MASK] are usually not lower-cased for instance).
See details for `tokenizers.AddedToken` in HuggingFace tokenizers library.
Returns:
`int`: Number of tokens added to the vocabulary.
Examples:
```python
# Let's see how to increase the vocabulary of Bert model and tokenizer
tokenizer = BertTokenizerFast.from_pretrained("bert-base-uncased")
model = BertModel.from_pretrained("bert-base-uncased")
num_added_toks = tokenizer.add_tokens(["new_tok1", "my_new-tok2"])
print("We have added", num_added_toks, "tokens")
# Notice: resize_token_embeddings expect to receive the full size of the new vocabulary, i.e., the length of the tokenizer.
model.resize_token_embeddings(len(tokenizer))
```"""
if not new_tokens:
return 0
if not isinstance(new_tokens, (list, tuple)):
new_tokens = [new_tokens]
return self._add_tokens(new_tokens, special_tokens=special_tokens)
def _add_tokens(self, new_tokens: Union[List[str], List[AddedToken]], special_tokens: bool = False) -> int:
raise NotImplementedError
@property
def bos_token(self) -> str:
"""
`str`: Beginning of sentence token. Log an error if used while not having been set.
"""
if self._bos_token is None and self.verbose:
logger.error("Using bos_token, but it is not set yet.")
return None
return str(self._bos_token)
@property
def eos_token(self) -> str:
"""
`str`: End of sentence token. Log an error if used while not having been set.
"""
if self._eos_token is None and self.verbose:
logger.error("Using eos_token, but it is not set yet.")
return None
return str(self._eos_token)
@property
def unk_token(self) -> str:
"""
`str`: Unknown token. Log an error if used while not having been set.
"""
if self._unk_token is None and self.verbose:
logger.error("Using unk_token, but it is not set yet.")
return None
return str(self._unk_token)
@property
def sep_token(self) -> str:
"""
`str`: Separation token, to separate context and query in an input sequence. Log an error if used while not
having been set.
"""
if self._sep_token is None and self.verbose:
logger.error("Using sep_token, but it is not set yet.")
return None
return str(self._sep_token)
@property
def pad_token(self) -> str:
"""
`str`: Padding token. Log an error if used while not having been set.
"""
if self._pad_token is None and self.verbose:
logger.error("Using pad_token, but it is not set yet.")
return None
return str(self._pad_token)
@property
def cls_token(self) -> str:
"""
`str`: Classification token, to extract a summary of an input sequence leveraging self-attention along the full
depth of the model. Log an error if used while not having been set.
"""
if self._cls_token is None and self.verbose:
logger.error("Using cls_token, but it is not set yet.")
return None
return str(self._cls_token)
@property
def mask_token(self) -> str:
"""
`str`: Mask token, to use when training a model with masked-language modeling. Log an error if used while not
having been set.
"""
if self._mask_token is None and self.verbose:
logger.error("Using mask_token, but it is not set yet.")
return None
return str(self._mask_token)
@property
def additional_special_tokens(self) -> List[str]:
"""
`List[str]`: All the additional special tokens you may want to use. Log an error if used while not having been
set.
"""
if self._additional_special_tokens is None and self.verbose:
logger.error("Using additional_special_tokens, but it is not set yet.")
return None
return [str(tok) for tok in self._additional_special_tokens]
@bos_token.setter
def bos_token(self, value):
self._bos_token = value
@eos_token.setter
def eos_token(self, value):
self._eos_token = value
@unk_token.setter
def unk_token(self, value):
self._unk_token = value
@sep_token.setter
def sep_token(self, value):
self._sep_token = value
@pad_token.setter
def pad_token(self, value):
self._pad_token = value
@cls_token.setter
def cls_token(self, value):
self._cls_token = value
@mask_token.setter
def mask_token(self, value):
self._mask_token = value
@additional_special_tokens.setter
def additional_special_tokens(self, value):
self._additional_special_tokens = value
@property
def bos_token_id(self) -> Optional[int]:
"""
`Optional[int]`: Id of the beginning of sentence token in the vocabulary. Returns `None` if the token has not
been set.
"""
if self._bos_token is None:
return None
return self.convert_tokens_to_ids(self.bos_token)
@property
def eos_token_id(self) -> Optional[int]:
"""
`Optional[int]`: Id of the end of sentence token in the vocabulary. Returns `None` if the token has not been
set.
"""
if self._eos_token is None:
return None
return self.convert_tokens_to_ids(self.eos_token)
@property
def unk_token_id(self) -> Optional[int]:
"""
`Optional[int]`: Id of the unknown token in the vocabulary. Returns `None` if the token has not been set.
"""
if self._unk_token is None:
return None
return self.convert_tokens_to_ids(self.unk_token)
@property
def sep_token_id(self) -> Optional[int]:
"""
`Optional[int]`: Id of the separation token in the vocabulary, to separate context and query in an input
sequence. Returns `None` if the token has not been set.
"""
if self._sep_token is None:
return None
return self.convert_tokens_to_ids(self.sep_token)
@property
def pad_token_id(self) -> Optional[int]:
"""
`Optional[int]`: Id of the padding token in the vocabulary. Returns `None` if the token has not been set.
"""
if self._pad_token is None:
return None
return self.convert_tokens_to_ids(self.pad_token)
@property
def pad_token_type_id(self) -> int:
"""
`int`: Id of the padding token type in the vocabulary.
"""
return self._pad_token_type_id
@property
def cls_token_id(self) -> Optional[int]:
"""
`Optional[int]`: Id of the classification token in the vocabulary, to extract a summary of an input sequence
leveraging self-attention along the full depth of the model.
Returns `None` if the token has not been set.
"""
if self._cls_token is None:
return None
return self.convert_tokens_to_ids(self.cls_token)
@property
def mask_token_id(self) -> Optional[int]:
"""
`Optional[int]`: Id of the mask token in the vocabulary, used when training a model with masked-language
modeling. Returns `None` if the token has not been set.
"""
if self._mask_token is None:
return None
return self.convert_tokens_to_ids(self.mask_token)
@property
def additional_special_tokens_ids(self) -> List[int]:
"""
`List[int]`: Ids of all the additional special tokens in the vocabulary. Log an error if used while not having
been set.
"""
return self.convert_tokens_to_ids(self.additional_special_tokens)
@bos_token_id.setter
def bos_token_id(self, value):
self._bos_token = self.convert_tokens_to_ids(value)
@eos_token_id.setter
def eos_token_id(self, value):
self._eos_token = self.convert_tokens_to_ids(value)
@unk_token_id.setter
def unk_token_id(self, value):
self._unk_token = self.convert_tokens_to_ids(value)
@sep_token_id.setter
def sep_token_id(self, value):
self._sep_token = self.convert_tokens_to_ids(value)
@pad_token_id.setter
def pad_token_id(self, value):
self._pad_token = self.convert_tokens_to_ids(value)
@cls_token_id.setter
def cls_token_id(self, value):
self._cls_token = self.convert_tokens_to_ids(value)
@mask_token_id.setter
def mask_token_id(self, value):
self._mask_token = self.convert_tokens_to_ids(value)
@additional_special_tokens_ids.setter
def additional_special_tokens_ids(self, values):
self._additional_special_tokens = [self.convert_tokens_to_ids(value) for value in values]
@property
def special_tokens_map(self) -> Dict[str, Union[str, List[str]]]:
"""
`Dict[str, Union[str, List[str]]]`: A dictionary mapping special token class attributes (`cls_token`,
`unk_token`, etc.) to their values (`'<unk>'`, `'<cls>'`, etc.).
Convert potential tokens of `tokenizers.AddedToken` type to string.
"""
set_attr = {}
for attr in self.SPECIAL_TOKENS_ATTRIBUTES:
attr_value = getattr(self, "_" + attr)
if attr_value:
set_attr[attr] = (
type(attr_value)(str(attr_value_sub) for attr_value_sub in attr_value)
if isinstance(attr_value, (list, tuple))
else str(attr_value)
)
return set_attr
@property
def special_tokens_map_extended(self) -> Dict[str, Union[str, AddedToken, List[Union[str, AddedToken]]]]:
"""
`Dict[str, Union[str, tokenizers.AddedToken, List[Union[str, tokenizers.AddedToken]]]]`: A dictionary mapping
special token class attributes (`cls_token`, `unk_token`, etc.) to their values (`'<unk>'`, `'<cls>'`, etc.).
Don't convert tokens of `tokenizers.AddedToken` type to string so they can be used to control more finely how
special tokens are tokenized.
"""
set_attr = {}
for attr in self.SPECIAL_TOKENS_ATTRIBUTES:
attr_value = getattr(self, "_" + attr)
if attr_value:
set_attr[attr] = attr_value
return set_attr
@property
def all_special_tokens(self) -> List[str]:
"""
`List[str]`: All the special tokens (`'<unk>'`, `'<cls>'`, etc.) mapped to class attributes.
Convert tokens of `tokenizers.AddedToken` type to string.
"""
all_toks = [str(s) for s in self.all_special_tokens_extended]
return all_toks
@property
def all_special_tokens_extended(self) -> List[Union[str, AddedToken]]:
"""
`List[Union[str, tokenizers.AddedToken]]`: All the special tokens (`'<unk>'`, `'<cls>'`, etc.) mapped to class
attributes.
Don't convert tokens of `tokenizers.AddedToken` type to string so they can be used to control more finely how
special tokens are tokenized.
"""
all_toks = []
set_attr = self.special_tokens_map_extended
for attr_value in set_attr.values():
all_toks = all_toks + (list(attr_value) if isinstance(attr_value, (list, tuple)) else [attr_value])
all_toks = list(OrderedDict.fromkeys(all_toks))
return all_toks
@property
def all_special_ids(self) -> List[int]:
"""
`List[int]`: List the ids of the special tokens(`'<unk>'`, `'<cls>'`, etc.) mapped to class attributes.
"""
all_toks = self.all_special_tokens
all_ids = self.convert_tokens_to_ids(all_toks)
return all_ids
ENCODE_KWARGS_DOCSTRING = r"""
add_special_tokens (`bool`, *optional*, defaults to `True`):
Whether or not to encode the sequences with the special tokens relative to their model.
padding (`bool`, `str` or [`~file_utils.PaddingStrategy`], *optional*, defaults to `False`):
Activates and controls padding. Accepts the following values:
- `True` or `'longest'`: Pad to the longest sequence in the batch (or no padding if only a single
sequence if provided).
- `'max_length'`: Pad to a maximum length specified with the argument `max_length` or to the maximum
acceptable input length for the model if that argument is not provided.
- `False` or `'do_not_pad'` (default): No padding (i.e., can output a batch with sequences of different
lengths).
truncation (`bool`, `str` or [`~tokenization_utils_base.TruncationStrategy`], *optional*, defaults to `False`):
Activates and controls truncation. Accepts the following values:
- `True` or `'longest_first'`: Truncate to a maximum length specified with the argument `max_length` or
to the maximum acceptable input length for the model if that argument is not provided. This will
truncate token by token, removing a token from the longest sequence in the pair if a pair of
sequences (or a batch of pairs) is provided.
- `'only_first'`: Truncate to a maximum length specified with the argument `max_length` or to the
maximum acceptable input length for the model if that argument is not provided. This will only
truncate the first sequence of a pair if a pair of sequences (or a batch of pairs) is provided.
- `'only_second'`: Truncate to a maximum length specified with the argument `max_length` or to the
maximum acceptable input length for the model if that argument is not provided. This will only
truncate the second sequence of a pair if a pair of sequences (or a batch of pairs) is provided.
- `False` or `'do_not_truncate'` (default): No truncation (i.e., can output batch with sequence lengths
greater than the model maximum admissible input size).
max_length (`int`, *optional*):
Controls the maximum length to use by one of the truncation/padding parameters.
If left unset or set to `None`, this will use the predefined model maximum length if a maximum length
is required by one of the truncation/padding parameters. If the model has no specific maximum input
length (like XLNet) truncation/padding to a maximum length will be deactivated.
stride (`int`, *optional*, defaults to 0):
If set to a number along with `max_length`, the overflowing tokens returned when
`return_overflowing_tokens=True` will contain some tokens from the end of the truncated sequence
returned to provide some overlap between truncated and overflowing sequences. The value of this
argument defines the number of overlapping tokens.
is_split_into_words (`bool`, *optional*, defaults to `False`):
Whether or not the input is already pre-tokenized (e.g., split into words). If set to `True`, the
tokenizer assumes the input is already split into words (for instance, by splitting it on whitespace)
which it will tokenize. This is useful for NER or token classification.
pad_to_multiple_of (`int`, *optional*):
If set will pad the sequence to a multiple of the provided value. This is especially useful to enable
the use of Tensor Cores on NVIDIA hardware with compute capability >= 7.5 (Volta).
return_tensors (`str` or [`~file_utils.TensorType`], *optional*):
If set, will return tensors instead of list of python integers. Acceptable values are:
- `'tf'`: Return TensorFlow `tf.constant` objects.
- `'pt'`: Return PyTorch `torch.Tensor` objects.
- `'np'`: Return Numpy `np.ndarray` objects.
"""
ENCODE_PLUS_ADDITIONAL_KWARGS_DOCSTRING = r"""
return_token_type_ids (`bool`, *optional*):
Whether to return token type IDs. If left to the default, will return the token type IDs according to
the specific tokenizer's default, defined by the `return_outputs` attribute.
[What are token type IDs?](../glossary#token-type-ids)
return_attention_mask (`bool`, *optional*):
Whether to return the attention mask. If left to the default, will return the attention mask according
to the specific tokenizer's default, defined by the `return_outputs` attribute.
[What are attention masks?](../glossary#attention-mask)
return_overflowing_tokens (`bool`, *optional*, defaults to `False`):
Whether or not to return overflowing token sequences. If a pair of sequences of input ids (or a batch
of pairs) is provided with `truncation_strategy = longest_first` or `True`, an error is raised instead
of returning overflowing tokens.
return_special_tokens_mask (`bool`, *optional*, defaults to `False`):
Whether or not to return special tokens mask information.
return_offsets_mapping (`bool`, *optional*, defaults to `False`):
Whether or not to return `(char_start, char_end)` for each token.
This is only available on fast tokenizers inheriting from [`PreTrainedTokenizerFast`], if using
Python's tokenizer, this method will raise `NotImplementedError`.
return_length (`bool`, *optional*, defaults to `False`):
Whether or not to return the lengths of the encoded inputs.
verbose (`bool`, *optional*, defaults to `True`):
Whether or not to print more information and warnings.
**kwargs: passed to the `self.tokenize()` method
Return:
[`BatchEncoding`]: A [`BatchEncoding`] with the following fields:
- **input_ids** -- List of token ids to be fed to a model.
[What are input IDs?](../glossary#input-ids)
- **token_type_ids** -- List of token type ids to be fed to a model (when `return_token_type_ids=True` or
if *"token_type_ids"* is in `self.model_input_names`).
[What are token type IDs?](../glossary#token-type-ids)
- **attention_mask** -- List of indices specifying which tokens should be attended to by the model (when
`return_attention_mask=True` or if *"attention_mask"* is in `self.model_input_names`).
[What are attention masks?](../glossary#attention-mask)
- **overflowing_tokens** -- List of overflowing tokens sequences (when a `max_length` is specified and
`return_overflowing_tokens=True`).
- **num_truncated_tokens** -- Number of tokens truncated (when a `max_length` is specified and
`return_overflowing_tokens=True`).
- **special_tokens_mask** -- List of 0s and 1s, with 1 specifying added special tokens and 0 specifying
regular sequence tokens (when `add_special_tokens=True` and `return_special_tokens_mask=True`).
- **length** -- The length of the inputs (when `return_length=True`)
"""
INIT_TOKENIZER_DOCSTRING = r"""
Class attributes (overridden by derived classes)
- **vocab_files_names** (`Dict[str, str]`) -- A dictionary with, as keys, the `__init__` keyword name of each
vocabulary file required by the model, and as associated values, the filename for saving the associated file
(string).
- **pretrained_vocab_files_map** (`Dict[str, Dict[str, str]]`) -- A dictionary of dictionaries, with the
high-level keys being the `__init__` keyword name of each vocabulary file required by the model, the
low-level being the `short-cut-names` of the pretrained models with, as associated values, the `url` to the
associated pretrained vocabulary file.
- **max_model_input_sizes** (`Dict[str, Optional[int]]`) -- A dictionary with, as keys, the `short-cut-names`
of the pretrained models, and as associated values, the maximum length of the sequence inputs of this model,
or `None` if the model has no maximum input size.
- **pretrained_init_configuration** (`Dict[str, Dict[str, Any]]`) -- A dictionary with, as keys, the
`short-cut-names` of the pretrained models, and as associated values, a dictionary of specific arguments to
pass to the `__init__` method of the tokenizer class for this pretrained model when loading the tokenizer
with the [`~tokenization_utils_base.PreTrainedTokenizerBase.from_pretrained`] method.
- **model_input_names** (`List[str]`) -- A list of inputs expected in the forward pass of the model.
- **padding_side** (`str`) -- The default value for the side on which the model should have padding applied.
Should be `'right'` or `'left'`.
- **truncation_side** (`str`) -- The default value for the side on which the model should have truncation
applied. Should be `'right'` or `'left'`.
Args:
model_max_length (`int`, *optional*):
The maximum length (in number of tokens) for the inputs to the transformer model. When the tokenizer is
loaded with [`~tokenization_utils_base.PreTrainedTokenizerBase.from_pretrained`], this will be set to the
value stored for the associated model in `max_model_input_sizes` (see above). If no value is provided, will
default to VERY_LARGE_INTEGER (`int(1e30)`).
padding_side (`str`, *optional*):
The side on which the model should have padding applied. Should be selected between ['right', 'left'].
Default value is picked from the class attribute of the same name.
truncation_side (`str`, *optional*):
The side on which the model should have truncation applied. Should be selected between ['right', 'left'].
Default value is picked from the class attribute of the same name.
model_input_names (`List[string]`, *optional*):
The list of inputs accepted by the forward pass of the model (like `"token_type_ids"` or
`"attention_mask"`). Default value is picked from the class attribute of the same name.
bos_token (`str` or `tokenizers.AddedToken`, *optional*):
A special token representing the beginning of a sentence. Will be associated to `self.bos_token` and
`self.bos_token_id`.
eos_token (`str` or `tokenizers.AddedToken`, *optional*):
A special token representing the end of a sentence. Will be associated to `self.eos_token` and
`self.eos_token_id`.
unk_token (`str` or `tokenizers.AddedToken`, *optional*):
A special token representing an out-of-vocabulary token. Will be associated to `self.unk_token` and
`self.unk_token_id`.
sep_token (`str` or `tokenizers.AddedToken`, *optional*):
A special token separating two different sentences in the same input (used by BERT for instance). Will be
associated to `self.sep_token` and `self.sep_token_id`.
pad_token (`str` or `tokenizers.AddedToken`, *optional*):
A special token used to make arrays of tokens the same size for batching purpose. Will then be ignored by
attention mechanisms or loss computation. Will be associated to `self.pad_token` and `self.pad_token_id`.
cls_token (`str` or `tokenizers.AddedToken`, *optional*):
A special token representing the class of the input (used by BERT for instance). Will be associated to
`self.cls_token` and `self.cls_token_id`.
mask_token (`str` or `tokenizers.AddedToken`, *optional*):
A special token representing a masked token (used by masked-language modeling pretraining objectives, like
BERT). Will be associated to `self.mask_token` and `self.mask_token_id`.
additional_special_tokens (tuple or list of `str` or `tokenizers.AddedToken`, *optional*):
A tuple or a list of additional special tokens. Add them here to ensure they won't be split by the
tokenization process. Will be associated to `self.additional_special_tokens` and
`self.additional_special_tokens_ids`.
"""
@add_end_docstrings(INIT_TOKENIZER_DOCSTRING)
class PreTrainedTokenizerBase(SpecialTokensMixin, PushToHubMixin):
"""
Base class for [`PreTrainedTokenizer`] and [`PreTrainedTokenizerFast`].
Handles shared (mostly boiler plate) methods for those two classes.
"""
vocab_files_names: Dict[str, str] = {}
pretrained_vocab_files_map: Dict[str, Dict[str, str]] = {}
pretrained_init_configuration: Dict[str, Dict[str, Any]] = {}
max_model_input_sizes: Dict[str, Optional[int]] = {}
_auto_class: Optional[str] = None
# first name has to correspond to main model input name
# to make sure `tokenizer.pad(...)` works correctly
model_input_names: List[str] = ["input_ids", "token_type_ids", "attention_mask"]
padding_side: str = "right"
truncation_side: str = "right"
slow_tokenizer_class = None
def __init__(self, **kwargs):
# inputs and kwargs for saving and re-loading (see ``from_pretrained`` and ``save_pretrained``)
self.init_inputs = ()
self.init_kwargs = copy.deepcopy(kwargs)
self.name_or_path = kwargs.pop("name_or_path", "")
self._processor_class = kwargs.pop("processor_class", None)
# For backward compatibility we fallback to set model_max_length from max_len if provided
model_max_length = kwargs.pop("model_max_length", kwargs.pop("max_len", None))
self.model_max_length = model_max_length if model_max_length is not None else VERY_LARGE_INTEGER
# Padding and truncation side are right by default and overridden in subclasses. If specified in the kwargs, it
# is changed.
self.padding_side = kwargs.pop("padding_side", self.padding_side)
if self.padding_side not in ["right", "left"]:
raise ValueError(
f"Padding side should be selected between 'right' and 'left', current value: {self.padding_side}"
)
self.truncation_side = kwargs.pop("truncation_side", self.truncation_side)
if self.truncation_side not in ["right", "left"]:
raise ValueError(
f"Padding side should be selected between 'right' and 'left', current value: {self.truncation_side}"
)
self.model_input_names = kwargs.pop("model_input_names", self.model_input_names)
self.deprecation_warnings = (
{}
) # Use to store when we have already noticed a deprecation warning (avoid overlogging).
super().__init__(**kwargs)
@property
def max_len_single_sentence(self) -> int:
"""
`int`: The maximum length of a sentence that can be fed to the model.
"""
return self.model_max_length - self.num_special_tokens_to_add(pair=False)
@property
def max_len_sentences_pair(self) -> int:
"""
`int`: The maximum combined length of a pair of sentences that can be fed to the model.
"""
return self.model_max_length - self.num_special_tokens_to_add(pair=True)
@max_len_single_sentence.setter
def max_len_single_sentence(self, value) -> int:
# For backward compatibility, allow to try to setup 'max_len_single_sentence'.
if value == self.model_max_length - self.num_special_tokens_to_add(pair=False) and self.verbose:
if not self.deprecation_warnings.get("max_len_single_sentence", False):
logger.warning(
"Setting 'max_len_single_sentence' is now deprecated. " "This value is automatically set up."
)
self.deprecation_warnings["max_len_single_sentence"] = True
else:
raise ValueError(
"Setting 'max_len_single_sentence' is now deprecated. " "This value is automatically set up."
)
@max_len_sentences_pair.setter
def max_len_sentences_pair(self, value) -> int:
# For backward compatibility, allow to try to setup 'max_len_sentences_pair'.
if value == self.model_max_length - self.num_special_tokens_to_add(pair=True) and self.verbose:
if not self.deprecation_warnings.get("max_len_sentences_pair", False):
logger.warning(
"Setting 'max_len_sentences_pair' is now deprecated. " "This value is automatically set up."
)
self.deprecation_warnings["max_len_sentences_pair"] = True
else:
raise ValueError(
"Setting 'max_len_sentences_pair' is now deprecated. " "This value is automatically set up."
)
def _set_processor_class(self, processor_class: str):
"""Sets processor class as an attribute."""
self._processor_class = processor_class
def __repr__(self) -> str:
return (
f"{'PreTrainedTokenizerFast' if self.is_fast else 'PreTrainedTokenizer'}(name_or_path='{self.name_or_path}', "
f"vocab_size={self.vocab_size}, model_max_len={self.model_max_length}, is_fast={self.is_fast}, "
f"padding_side='{self.padding_side}', truncation_side='{self.truncation_side}', special_tokens={self.special_tokens_map_extended})"
)
def get_vocab(self) -> Dict[str, int]:
"""
Returns the vocabulary as a dictionary of token to index.
`tokenizer.get_vocab()[token]` is equivalent to `tokenizer.convert_tokens_to_ids(token)` when `token` is in the
vocab.
Returns:
`Dict[str, int]`: The vocabulary.
"""
raise NotImplementedError()
@classmethod
def from_pretrained(cls, pretrained_model_name_or_path: Union[str, os.PathLike], *init_inputs, **kwargs):
r"""
Instantiate a [`~tokenization_utils_base.PreTrainedTokenizerBase`] (or a derived class) from a predefined
tokenizer.
Args:
pretrained_model_name_or_path (`str` or `os.PathLike`):
Can be either:
- A string, the *model id* of a predefined tokenizer hosted inside a model repo on huggingface.co.
Valid model ids can be located at the root-level, like `bert-base-uncased`, or namespaced under a
user or organization name, like `dbmdz/bert-base-german-cased`.
- A path to a *directory* containing vocabulary files required by the tokenizer, for instance saved
using the [`~tokenization_utils_base.PreTrainedTokenizerBase.save_pretrained`] method, e.g.,
`./my_model_directory/`.
- (**Deprecated**, not applicable to all derived classes) A path or url to a single saved vocabulary
file (if and only if the tokenizer only requires a single vocabulary file like Bert or XLNet), e.g.,
`./my_model_directory/vocab.txt`.
cache_dir (`str` or `os.PathLike`, *optional*):
Path to a directory in which a downloaded predefined tokenizer vocabulary files should be cached if the
standard cache should not be used.
force_download (`bool`, *optional*, defaults to `False`):
Whether or not to force the (re-)download the vocabulary files and override the cached versions if they
exist.
resume_download (`bool`, *optional*, defaults to `False`):
Whether or not to delete incompletely received files. Attempt to resume the download if such a file
exists.
proxies (`Dict[str, str]`, *optional*):
A dictionary of proxy servers to use by protocol or endpoint, e.g., `{'http': 'foo.bar:3128',
'http://hostname': 'foo.bar:4012'}`. The proxies are used on each request.
use_auth_token (`str` or *bool*, *optional*):
The token to use as HTTP bearer authorization for remote files. If `True`, will use the token generated
when running `transformers-cli login` (stored in `~/.huggingface`).
local_files_only (`bool`, *optional*, defaults to `False`):
Whether or not to only rely on local files and not to attempt to download any files.
revision(`str`, *optional*, defaults to `"main"`):
The specific model version to use. It can be a branch name, a tag name, or a commit id, since we use a
git-based system for storing models and other artifacts on huggingface.co, so `revision` can be any
identifier allowed by git.
subfolder (`str`, *optional*):
In case the relevant files are located inside a subfolder of the model repo on huggingface.co (e.g. for
facebook/rag-token-base), specify it here.
inputs (additional positional arguments, *optional*):
Will be passed along to the Tokenizer `__init__` method.
kwargs (additional keyword arguments, *optional*):
Will be passed to the Tokenizer `__init__` method. Can be used to set special tokens like `bos_token`,
`eos_token`, `unk_token`, `sep_token`, `pad_token`, `cls_token`, `mask_token`,
`additional_special_tokens`. See parameters in the `__init__` for more details.
<Tip>
Passing `use_auth_token=True` is required when you want to use a private model.
</Tip>
Examples:
```python
# We can't instantiate directly the base class *PreTrainedTokenizerBase* so let's show our examples on a derived class: BertTokenizer
# Download vocabulary from huggingface.co and cache.
tokenizer = BertTokenizer.from_pretrained("bert-base-uncased")
# Download vocabulary from huggingface.co (user-uploaded) and cache.
tokenizer = BertTokenizer.from_pretrained("dbmdz/bert-base-german-cased")
# If vocabulary files are in a directory (e.g. tokenizer was saved using *save_pretrained('./test/saved_model/')*)
tokenizer = BertTokenizer.from_pretrained("./test/saved_model/")
# If the tokenizer uses a single vocabulary file, you can point directly to this file
tokenizer = BertTokenizer.from_pretrained("./test/saved_model/my_vocab.txt")
# You can link tokens to special vocabulary when instantiating
tokenizer = BertTokenizer.from_pretrained("bert-base-uncased", unk_token="<unk>")
# You should be sure '<unk>' is in the vocabulary when doing that.
# Otherwise use tokenizer.add_special_tokens({'unk_token': '<unk>'}) instead)
assert tokenizer.unk_token == "<unk>"
```"""
cache_dir = kwargs.pop("cache_dir", None)
force_download = kwargs.pop("force_download", False)
resume_download = kwargs.pop("resume_download", False)
proxies = kwargs.pop("proxies", None)
local_files_only = kwargs.pop("local_files_only", False)
use_auth_token = kwargs.pop("use_auth_token", None)
revision = kwargs.pop("revision", None)
subfolder = kwargs.pop("subfolder", None)
from_pipeline = kwargs.pop("_from_pipeline", None)
from_auto_class = kwargs.pop("_from_auto", False)
user_agent = {"file_type": "tokenizer", "from_auto_class": from_auto_class, "is_fast": "Fast" in cls.__name__}
if from_pipeline is not None:
user_agent["using_pipeline"] = from_pipeline
if is_offline_mode() and not local_files_only:
logger.info("Offline mode: forcing local_files_only=True")
local_files_only = True
pretrained_model_name_or_path = str(pretrained_model_name_or_path)
vocab_files = {}
init_configuration = {}
if os.path.isfile(pretrained_model_name_or_path) or is_remote_url(pretrained_model_name_or_path):
if len(cls.vocab_files_names) > 1:
raise ValueError(
f"Calling {cls.__name__}.from_pretrained() with the path to a single file or url is not "
"supported for this tokenizer. Use a model identifier or the path to a directory instead."
)
warnings.warn(
f"Calling {cls.__name__}.from_pretrained() with the path to a single file or url is deprecated and "
"won't be possible anymore in v5. Use a model identifier or the path to a directory instead.",
FutureWarning,
)
file_id = list(cls.vocab_files_names.keys())[0]
vocab_files[file_id] = pretrained_model_name_or_path
else:
# At this point pretrained_model_name_or_path is either a directory or a model identifier name
additional_files_names = {
"added_tokens_file": ADDED_TOKENS_FILE,
"special_tokens_map_file": SPECIAL_TOKENS_MAP_FILE,
"tokenizer_config_file": TOKENIZER_CONFIG_FILE,
}
vocab_files_target = {**cls.vocab_files_names, **additional_files_names}
if "tokenizer_file" in vocab_files_target:
# Try to get the tokenizer config to see if there are versioned tokenizer files.
fast_tokenizer_file = FULL_TOKENIZER_FILE
resolved_config_file = get_file_from_repo(
pretrained_model_name_or_path,
TOKENIZER_CONFIG_FILE,
cache_dir=cache_dir,
force_download=force_download,
resume_download=resume_download,
proxies=proxies,
use_auth_token=use_auth_token,
revision=revision,
local_files_only=local_files_only,
)
if resolved_config_file is not None:
with open(resolved_config_file, encoding="utf-8") as reader:
tokenizer_config = json.load(reader)
if "fast_tokenizer_files" in tokenizer_config:
fast_tokenizer_file = get_fast_tokenizer_file(tokenizer_config["fast_tokenizer_files"])
vocab_files_target["tokenizer_file"] = fast_tokenizer_file
# Look for the tokenizer files
for file_id, file_name in vocab_files_target.items():
if os.path.isdir(pretrained_model_name_or_path):
if subfolder is not None:
full_file_name = os.path.join(pretrained_model_name_or_path, subfolder, file_name)
else:
full_file_name = os.path.join(pretrained_model_name_or_path, file_name)
if not os.path.exists(full_file_name):
logger.info(f"Didn't find file {full_file_name}. We won't load it.")
full_file_name = None
else:
full_file_name = hf_bucket_url(
pretrained_model_name_or_path,
filename=file_name,
subfolder=subfolder,
revision=revision,
mirror=None,
)
vocab_files[file_id] = full_file_name
# Get files from url, cache, or disk depending on the case
resolved_vocab_files = {}
unresolved_files = []
for file_id, file_path in vocab_files.items():
if file_path is None:
resolved_vocab_files[file_id] = None
else:
try:
resolved_vocab_files[file_id] = cached_path(
file_path,
cache_dir=cache_dir,
force_download=force_download,
proxies=proxies,
resume_download=resume_download,
local_files_only=local_files_only,
use_auth_token=use_auth_token,
user_agent=user_agent,
)
except FileNotFoundError as error:
if local_files_only:
unresolved_files.append(file_id)
else:
raise error
except RepositoryNotFoundError:
raise EnvironmentError(
f"{pretrained_model_name_or_path} is not a local folder and is not a valid model identifier "
"listed on 'https://huggingface.co/models'\nIf this is a private repository, make sure to "
"pass a token having permission to this repo with `use_auth_token` or log in with "
"`huggingface-cli login` and pass `use_auth_token=True`."
)
except RevisionNotFoundError:
raise EnvironmentError(
f"{revision} is not a valid git identifier (branch name, tag name or commit id) that exists "
"for this model name. Check the model page at "
f"'https://huggingface.co/{pretrained_model_name_or_path}' for available revisions."
)
except EntryNotFoundError:
logger.debug(f"{pretrained_model_name_or_path} does not contain a file named {file_path}.")
resolved_vocab_files[file_id] = None
except HTTPError as err:
if "404 Client Error" in str(err):
logger.debug(f"Connection problem to access {file_path}.")
resolved_vocab_files[file_id] = None
else:
raise err
if len(unresolved_files) > 0:
logger.info(
f"Can't load following files from cache: {unresolved_files} and cannot check if these "
"files are necessary for the tokenizer to operate."
)
if all(full_file_name is None for full_file_name in resolved_vocab_files.values()):
raise EnvironmentError(
f"Can't load tokenizer for '{pretrained_model_name_or_path}'. If you were trying to load it from "
"'https://huggingface.co/models', make sure you don't have a local directory with the same name. "
f"Otherwise, make sure '{pretrained_model_name_or_path}' is the correct path to a directory "
f"containing all relevant files for a {cls.__name__} tokenizer."
)
for file_id, file_path in vocab_files.items():
if file_id not in resolved_vocab_files:
continue
if file_path == resolved_vocab_files[file_id]:
logger.info(f"loading file {file_path}")
else:
logger.info(f"loading file {file_path} from cache at {resolved_vocab_files[file_id]}")
return cls._from_pretrained(
resolved_vocab_files,
pretrained_model_name_or_path,
init_configuration,
*init_inputs,
use_auth_token=use_auth_token,
cache_dir=cache_dir,
**kwargs,
)
@classmethod
def _from_pretrained(
cls,
resolved_vocab_files,
pretrained_model_name_or_path,
init_configuration,
*init_inputs,
use_auth_token=None,
cache_dir=None,
**kwargs
):
# We instantiate fast tokenizers based on a slow tokenizer if we don't have access to the tokenizer.json
# file or if `from_slow` is set to True.
from_slow = kwargs.get("from_slow", False)
has_tokenizer_file = resolved_vocab_files.get("tokenizer_file", None) is not None
if (from_slow or not has_tokenizer_file) and cls.slow_tokenizer_class is not None:
slow_tokenizer = (cls.slow_tokenizer_class)._from_pretrained(
copy.deepcopy(resolved_vocab_files),
pretrained_model_name_or_path,
copy.deepcopy(init_configuration),
*init_inputs,
**(copy.deepcopy(kwargs)),
)
else:
slow_tokenizer = None
# Prepare tokenizer initialization kwargs
# Did we saved some inputs and kwargs to reload ?
tokenizer_config_file = resolved_vocab_files.pop("tokenizer_config_file", None)
if tokenizer_config_file is not None:
with open(tokenizer_config_file, encoding="utf-8") as tokenizer_config_handle:
init_kwargs = json.load(tokenizer_config_handle)
# First attempt. We get tokenizer_class from tokenizer_config to check mismatch between tokenizers.
config_tokenizer_class = init_kwargs.get("tokenizer_class")
init_kwargs.pop("tokenizer_class", None)
init_kwargs.pop("auto_map", None)
saved_init_inputs = init_kwargs.pop("init_inputs", ())
if not init_inputs:
init_inputs = saved_init_inputs
else:
config_tokenizer_class = None
init_kwargs = init_configuration
if config_tokenizer_class is None:
from .models.auto.configuration_auto import AutoConfig # tests_ignore
# Second attempt. If we have not yet found tokenizer_class, let's try to use the config.
try:
config = AutoConfig.from_pretrained(
pretrained_model_name_or_path,
use_auth_token=use_auth_token,
cache_dir=cache_dir,
)
config_tokenizer_class = config.tokenizer_class
except (OSError, ValueError, KeyError):
# skip if an error occurred.
config = None
if config_tokenizer_class is None:
# Third attempt. If we have not yet found the original type of the tokenizer,
# we are loading we see if we can infer it from the type of the configuration file
from .models.auto.tokenization_auto import TOKENIZER_MAPPING_NAMES # tests_ignore
if hasattr(config, "model_type"):
model_type = config.model_type
else:
# Fallback: use pattern matching on the string.
model_type = None
for pattern in TOKENIZER_MAPPING_NAMES.keys():
if pattern in str(pretrained_model_name_or_path):
model_type = pattern
break
if model_type is not None:
config_tokenizer_class, config_tokenizer_class_fast = TOKENIZER_MAPPING_NAMES.get(
model_type, (None, None)
)
if config_tokenizer_class is None:
config_tokenizer_class = config_tokenizer_class_fast
if config_tokenizer_class is not None:
if cls.__name__.replace("Fast", "") != config_tokenizer_class.replace("Fast", ""):
logger.warning(
"The tokenizer class you load from this checkpoint is not the same type as the class this function is called from. "
"It may result in unexpected tokenization. \n"
f"The tokenizer class you load from this checkpoint is '{config_tokenizer_class}'. \n"
f"The class this function is called from is '{cls.__name__}'."
)
# Update with newly provided kwargs
init_kwargs.update(kwargs)
# Convert AddedTokens serialized as dict to class instances
def convert_added_tokens(obj: Union[AddedToken, Any]):
if isinstance(obj, dict) and "__type" in obj and obj["__type"] == "AddedToken":
obj.pop("__type")
return AddedToken(**obj)
elif isinstance(obj, (list, tuple)):
return list(convert_added_tokens(o) for o in obj)
elif isinstance(obj, dict):
return {k: convert_added_tokens(v) for k, v in obj.items()}
return obj
init_kwargs = convert_added_tokens(init_kwargs)
# Set max length if needed
if pretrained_model_name_or_path in cls.max_model_input_sizes:
# if we're using a pretrained model, ensure the tokenizer
# wont index sequences longer than the number of positional embeddings
model_max_length = cls.max_model_input_sizes[pretrained_model_name_or_path]
if model_max_length is not None and isinstance(model_max_length, (int, float)):
init_kwargs["model_max_length"] = min(init_kwargs.get("model_max_length", int(1e30)), model_max_length)
# Merge resolved_vocab_files arguments in init_kwargs.
added_tokens_file = resolved_vocab_files.pop("added_tokens_file", None)
for args_name, file_path in resolved_vocab_files.items():
if args_name not in init_kwargs:
init_kwargs[args_name] = file_path
if slow_tokenizer is not None:
init_kwargs["__slow_tokenizer"] = slow_tokenizer
init_kwargs["name_or_path"] = pretrained_model_name_or_path
# Instantiate tokenizer.
try:
tokenizer = cls(*init_inputs, **init_kwargs)
except OSError:
raise OSError(
"Unable to load vocabulary from file. "
"Please check that the provided vocabulary is accessible and not corrupted."
)
# Save inputs and kwargs for saving and re-loading with ``save_pretrained``
# Removed: Now done at the base class level
# tokenizer.init_inputs = init_inputs
# tokenizer.init_kwargs = init_kwargs
# If there is a complementary special token map, load it
special_tokens_map_file = resolved_vocab_files.pop("special_tokens_map_file", None)
if special_tokens_map_file is not None:
with open(special_tokens_map_file, encoding="utf-8") as special_tokens_map_handle:
special_tokens_map = json.load(special_tokens_map_handle)
for key, value in special_tokens_map.items():
if key in kwargs and kwargs[key]:
# This value has already been redefined by the kwargs
# We keep this new value and ignore the one stored in the special_tokens_map_file
continue
if isinstance(value, dict):
value = AddedToken(**value)
elif isinstance(value, list):
value = [AddedToken(**token) if isinstance(token, dict) else token for token in value]
setattr(tokenizer, key, value)
# Add supplementary tokens.
special_tokens = tokenizer.all_special_tokens
if added_tokens_file is not None:
with open(added_tokens_file, encoding="utf-8") as added_tokens_handle:
added_tok_encoder = json.load(added_tokens_handle)
# Sort added tokens by index
added_tok_encoder_sorted = list(sorted(added_tok_encoder.items(), key=lambda x: x[1]))
for token, index in added_tok_encoder_sorted:
if has_tokenizer_file and index != len(tokenizer) and tokenizer.convert_tokens_to_ids(token) != index:
# Tokenizer fast: added token needs to either be in the vocabulary with the proper index or the
# index is the current length of the tokenizer (not in vocabulary)
raise ValueError(
f"Wrong index found for {token}: should be {tokenizer.convert_tokens_to_ids(token)} but found "
f"{index}."
)
elif not has_tokenizer_file and index != len(tokenizer):
# Tokenizer slow: added token cannot already be in the vocabulary so its index needs to be the
# current length of the tokenizer.
raise ValueError(
f"Non-consecutive added token '{token}' found. "
f"Should have index {len(tokenizer)} but has index {index} in saved vocabulary."
)
# Safe to call on a tokenizer fast even if token already there.
tokenizer.add_tokens(token, special_tokens=bool(token in special_tokens))
# Check all our special tokens are registered as "no split" token (we don't cut them) and are in the vocab
added_tokens = tokenizer.sanitize_special_tokens()
if added_tokens:
logger.warning_advice(
"Special tokens have been added in the vocabulary, make sure the associated word embeddings are fine-tuned or trained."
)
return tokenizer
def save_pretrained(
self,
save_directory: Union[str, os.PathLike],
legacy_format: Optional[bool] = None,
filename_prefix: Optional[str] = None,
push_to_hub: bool = False,
**kwargs,
) -> Tuple[str]:
"""
Save the full tokenizer state.
This method make sure the full tokenizer can then be re-loaded using the
[`~tokenization_utils_base.PreTrainedTokenizer.from_pretrained`] class method..
Warning,None This won't save modifications you may have applied to the tokenizer after the instantiation (for
instance, modifying `tokenizer.do_lower_case` after creation).
Args:
save_directory (`str` or `os.PathLike`): The path to a directory where the tokenizer will be saved.
legacy_format (`bool`, *optional*):
Only applicable for a fast tokenizer. If unset (default), will save the tokenizer in the unified JSON
format as well as in legacy format if it exists, i.e. with tokenizer specific vocabulary and a separate
added_tokens files.
If `False`, will only save the tokenizer in the unified JSON format. This format is incompatible with
"slow" tokenizers (not powered by the *tokenizers* library), so the tokenizer will not be able to be
loaded in the corresponding "slow" tokenizer.
If `True`, will save the tokenizer in legacy format. If the "slow" tokenizer doesn't exits, a value
error is raised.
filename_prefix: (`str`, *optional*):
A prefix to add to the names of the files saved by the tokenizer.
push_to_hub (`bool`, *optional*, defaults to `False`):
Whether or not to push your model to the Hugging Face model hub after saving it.
<Tip warning={true}>
Using `push_to_hub=True` will synchronize the repository you are pushing to with `save_directory`,
which requires `save_directory` to be a local clone of the repo you are pushing to if it's an existing
folder. Pass along `temp_dir=True` to use a temporary directory instead.
</Tip>
Returns:
A tuple of `str`: The files saved.
"""
if os.path.isfile(save_directory):
logger.error(f"Provided path ({save_directory}) should be a directory, not a file")
return
if push_to_hub:
commit_message = kwargs.pop("commit_message", None)
repo = self._create_or_get_repo(save_directory, **kwargs)
os.makedirs(save_directory, exist_ok=True)
special_tokens_map_file = os.path.join(
save_directory, (filename_prefix + "-" if filename_prefix else "") + SPECIAL_TOKENS_MAP_FILE
)
tokenizer_config_file = os.path.join(
save_directory, (filename_prefix + "-" if filename_prefix else "") + TOKENIZER_CONFIG_FILE
)
tokenizer_config = copy.deepcopy(self.init_kwargs)
if len(self.init_inputs) > 0:
tokenizer_config["init_inputs"] = copy.deepcopy(self.init_inputs)
for file_id in self.vocab_files_names.keys():
tokenizer_config.pop(file_id, None)
# Sanitize AddedTokens
def convert_added_tokens(obj: Union[AddedToken, Any], add_type_field=True):
if isinstance(obj, AddedToken):
out = obj.__getstate__()
if add_type_field:
out["__type"] = "AddedToken"
return out
elif isinstance(obj, (list, tuple)):
return list(convert_added_tokens(o, add_type_field=add_type_field) for o in obj)
elif isinstance(obj, dict):
return {k: convert_added_tokens(v, add_type_field=add_type_field) for k, v in obj.items()}
return obj
# add_type_field=True to allow dicts in the kwargs / differentiate from AddedToken serialization
tokenizer_config = convert_added_tokens(tokenizer_config, add_type_field=True)
# Add tokenizer class to the tokenizer config to be able to reload it with from_pretrained
tokenizer_class = self.__class__.__name__
# Remove the Fast at the end unless we have a special `PreTrainedTokenizerFast`
if tokenizer_class.endswith("Fast") and tokenizer_class != "PreTrainedTokenizerFast":
tokenizer_class = tokenizer_class[:-4]
tokenizer_config["tokenizer_class"] = tokenizer_class
if getattr(self, "_auto_map", None) is not None:
tokenizer_config["auto_map"] = self._auto_map
if getattr(self, "_processor_class", None) is not None:
tokenizer_config["processor_class"] = self._processor_class
# If we have a custom model, we copy the file defining it in the folder and set the attributes so it can be
# loaded from the Hub.
if self._auto_class is not None:
custom_object_save(self, save_directory, config=tokenizer_config)
with open(tokenizer_config_file, "w", encoding="utf-8") as f:
f.write(json.dumps(tokenizer_config, ensure_ascii=False))
logger.info(f"tokenizer config file saved in {tokenizer_config_file}")
# Sanitize AddedTokens in special_tokens_map
write_dict = convert_added_tokens(self.special_tokens_map_extended, add_type_field=False)
with open(special_tokens_map_file, "w", encoding="utf-8") as f:
f.write(json.dumps(write_dict, ensure_ascii=False))
logger.info(f"Special tokens file saved in {special_tokens_map_file}")
file_names = (tokenizer_config_file, special_tokens_map_file)
save_files = self._save_pretrained(
save_directory=save_directory,
file_names=file_names,
legacy_format=legacy_format,
filename_prefix=filename_prefix,
)
if push_to_hub:
url = self._push_to_hub(repo, commit_message=commit_message)
logger.info(f"Tokenizer pushed to the hub in this commit: {url}")
return save_files
def _save_pretrained(
self,
save_directory: Union[str, os.PathLike],
file_names: Tuple[str],
legacy_format: Optional[bool] = None,
filename_prefix: Optional[str] = None,
) -> Tuple[str]:
"""
Save a tokenizer using the slow-tokenizer/legacy format: vocabulary + added tokens.
Fast tokenizers can also be saved in a unique JSON file containing {config + vocab + added-tokens} using the
specific [`~tokenization_utils_fast.PreTrainedTokenizerFast._save_pretrained`]
"""
if legacy_format is False:
raise ValueError(
"Only fast tokenizers (instances of PreTrainedTokenizerFast) can be saved in non legacy format."
)
save_directory = str(save_directory)
added_tokens_file = os.path.join(
save_directory, (filename_prefix + "-" if filename_prefix else "") + ADDED_TOKENS_FILE
)
added_vocab = self.get_added_vocab()
if added_vocab:
with open(added_tokens_file, "w", encoding="utf-8") as f:
out_str = json.dumps(added_vocab, ensure_ascii=False)
f.write(out_str)
logger.info(f"added tokens file saved in {added_tokens_file}")
vocab_files = self.save_vocabulary(save_directory, filename_prefix=filename_prefix)
return file_names + vocab_files + (added_tokens_file,)
def save_vocabulary(self, save_directory: str, filename_prefix: Optional[str] = None) -> Tuple[str]:
"""
Save only the vocabulary of the tokenizer (vocabulary + added tokens).
This method won't save the configuration and special token mappings of the tokenizer. Use
[`~PreTrainedTokenizerFast._save_pretrained`] to save the whole state of the tokenizer.
Args:
save_directory (`str`):
The directory in which to save the vocabulary.
filename_prefix (`str`, *optional*):
An optional prefix to add to the named of the saved files.
Returns:
`Tuple(str)`: Paths to the files saved.
"""
raise NotImplementedError
def tokenize(self, text: str, pair: Optional[str] = None, add_special_tokens: bool = False, **kwargs) -> List[str]:
"""
Converts a string in a sequence of tokens, replacing unknown tokens with the `unk_token`.
Args:
text (`str`):
The sequence to be encoded.
pair (`str`, *optional*):
A second sequence to be encoded with the first.
add_special_tokens (`bool`, *optional*, defaults to `False`):
Whether or not to add the special tokens associated with the corresponding model.
kwargs (additional keyword arguments, *optional*):
Will be passed to the underlying model specific encode method. See details in
[`~PreTrainedTokenizerBase.__call__`]
Returns:
`List[str]`: The list of tokens.
"""
raise NotImplementedError
@add_end_docstrings(
ENCODE_KWARGS_DOCSTRING,
"""
**kwargs: Passed along to the `.tokenize()` method.
""",
"""
Returns:
`List[int]`, `torch.Tensor`, `tf.Tensor` or `np.ndarray`: The tokenized ids of the text.
""",
)
def encode(
self,
text: Union[TextInput, PreTokenizedInput, EncodedInput],
text_pair: Optional[Union[TextInput, PreTokenizedInput, EncodedInput]] = None,
add_special_tokens: bool = True,
padding: Union[bool, str, PaddingStrategy] = False,
truncation: Union[bool, str, TruncationStrategy] = False,
max_length: Optional[int] = None,
stride: int = 0,
return_tensors: Optional[Union[str, TensorType]] = None,
**kwargs
) -> List[int]:
"""
Converts a string to a sequence of ids (integer), using the tokenizer and vocabulary.
Same as doing `self.convert_tokens_to_ids(self.tokenize(text))`.
Args:
text (`str`, `List[str]` or `List[int]`):
The first sequence to be encoded. This can be a string, a list of strings (tokenized string using the
`tokenize` method) or a list of integers (tokenized string ids using the `convert_tokens_to_ids`
method).
text_pair (`str`, `List[str]` or `List[int]`, *optional*):
Optional second sequence to be encoded. This can be a string, a list of strings (tokenized string using
the `tokenize` method) or a list of integers (tokenized string ids using the `convert_tokens_to_ids`
method).
"""
encoded_inputs = self.encode_plus(
text,
text_pair=text_pair,
add_special_tokens=add_special_tokens,
padding=padding,
truncation=truncation,
max_length=max_length,
stride=stride,
return_tensors=return_tensors,
**kwargs,
)
return encoded_inputs["input_ids"]
def num_special_tokens_to_add(self, pair: bool = False) -> int:
raise NotImplementedError
def _get_padding_truncation_strategies(
self, padding=False, truncation=False, max_length=None, pad_to_multiple_of=None, verbose=True, **kwargs
):
"""
Find the correct padding/truncation strategy with backward compatibility for old arguments (truncation_strategy
and pad_to_max_length) and behaviors.
"""
old_truncation_strategy = kwargs.pop("truncation_strategy", "do_not_truncate")
old_pad_to_max_length = kwargs.pop("pad_to_max_length", False)
# Backward compatibility for previous behavior, maybe we should deprecate it:
# If you only set max_length, it activates truncation for max_length
if max_length is not None and padding is False and truncation is False:
if verbose:
if not self.deprecation_warnings.get("Truncation-not-explicitly-activated", False):
logger.warning(
"Truncation was not explicitly activated but `max_length` is provided a specific value, "
"please use `truncation=True` to explicitly truncate examples to max length. "
"Defaulting to 'longest_first' truncation strategy. "
"If you encode pairs of sequences (GLUE-style) with the tokenizer you can select this strategy "
"more precisely by providing a specific strategy to `truncation`."
)
self.deprecation_warnings["Truncation-not-explicitly-activated"] = True
truncation = "longest_first"
# Get padding strategy
if padding is False and old_pad_to_max_length:
if verbose:
warnings.warn(
"The `pad_to_max_length` argument is deprecated and will be removed in a future version, "
"use `padding=True` or `padding='longest'` to pad to the longest sequence in the batch, or "
"use `padding='max_length'` to pad to a max length. In this case, you can give a specific "
"length with `max_length` (e.g. `max_length=45`) or leave max_length to None to pad to the "
"maximal input size of the model (e.g. 512 for Bert).",
FutureWarning,
)
if max_length is None:
padding_strategy = PaddingStrategy.LONGEST
else:
padding_strategy = PaddingStrategy.MAX_LENGTH
elif padding is not False:
if padding is True:
if verbose:
if max_length is not None and (truncation is False or truncation == "do_not_truncate"):
warnings.warn(
"`max_length` is ignored when `padding`=`True` and there is no truncation strategy. "
"To pad to max length, use `padding='max_length'`."
)
if old_pad_to_max_length is not False:
warnings.warn("Though `pad_to_max_length` = `True`, it is ignored because `padding`=`True`.")
padding_strategy = PaddingStrategy.LONGEST # Default to pad to the longest sequence in the batch
elif not isinstance(padding, PaddingStrategy):
padding_strategy = PaddingStrategy(padding)
elif isinstance(padding, PaddingStrategy):
padding_strategy = padding
else:
padding_strategy = PaddingStrategy.DO_NOT_PAD
# Get truncation strategy
if truncation is False and old_truncation_strategy != "do_not_truncate":
if verbose:
warnings.warn(
"The `truncation_strategy` argument is deprecated and will be removed in a future version, "
"use `truncation=True` to truncate examples to a max length. You can give a specific "
"length with `max_length` (e.g. `max_length=45`) or leave max_length to None to truncate to the "
"maximal input size of the model (e.g. 512 for Bert). "
" If you have pairs of inputs, you can give a specific truncation strategy selected among "
"`truncation='only_first'` (will only truncate the first sentence in the pairs) "
"`truncation='only_second'` (will only truncate the second sentence in the pairs) "
"or `truncation='longest_first'` (will iteratively remove tokens from the longest sentence in the pairs).",
FutureWarning,
)
truncation_strategy = TruncationStrategy(old_truncation_strategy)
elif truncation is not False:
if truncation is True:
truncation_strategy = (
TruncationStrategy.LONGEST_FIRST
) # Default to truncate the longest sequences in pairs of inputs
elif not isinstance(truncation, TruncationStrategy):
truncation_strategy = TruncationStrategy(truncation)
elif isinstance(truncation, TruncationStrategy):
truncation_strategy = truncation
else:
truncation_strategy = TruncationStrategy.DO_NOT_TRUNCATE
# Set max length if needed
if max_length is None:
if padding_strategy == PaddingStrategy.MAX_LENGTH:
if self.model_max_length > LARGE_INTEGER:
if verbose:
if not self.deprecation_warnings.get("Asking-to-pad-to-max_length", False):
logger.warning(
"Asking to pad to max_length but no maximum length is provided and the model has no predefined maximum length. "
"Default to no padding."
)
self.deprecation_warnings["Asking-to-pad-to-max_length"] = True
padding_strategy = PaddingStrategy.DO_NOT_PAD
else:
max_length = self.model_max_length
if truncation_strategy != TruncationStrategy.DO_NOT_TRUNCATE:
if self.model_max_length > LARGE_INTEGER:
if verbose:
if not self.deprecation_warnings.get("Asking-to-truncate-to-max_length", False):
logger.warning(
"Asking to truncate to max_length but no maximum length is provided and the model has no predefined maximum length. "
"Default to no truncation."
)
self.deprecation_warnings["Asking-to-truncate-to-max_length"] = True
truncation_strategy = TruncationStrategy.DO_NOT_TRUNCATE
else:
max_length = self.model_max_length
# Test if we have a padding token
if padding_strategy != PaddingStrategy.DO_NOT_PAD and (not self.pad_token or self.pad_token_id < 0):
raise ValueError(
"Asking to pad but the tokenizer does not have a padding token. "
"Please select a token to use as `pad_token` `(tokenizer.pad_token = tokenizer.eos_token e.g.)` "
"or add a new pad token via `tokenizer.add_special_tokens({'pad_token': '[PAD]'})`."
)
# Check that we will truncate to a multiple of pad_to_multiple_of if both are provided
if (
truncation_strategy != TruncationStrategy.DO_NOT_TRUNCATE
and padding_strategy != PaddingStrategy.DO_NOT_PAD
and pad_to_multiple_of is not None
and max_length is not None
and (max_length % pad_to_multiple_of != 0)
):
raise ValueError(
f"Truncation and padding are both activated but "
f"truncation length ({max_length}) is not a multiple of pad_to_multiple_of ({pad_to_multiple_of})."
)
return padding_strategy, truncation_strategy, max_length, kwargs
@add_end_docstrings(ENCODE_KWARGS_DOCSTRING, ENCODE_PLUS_ADDITIONAL_KWARGS_DOCSTRING)
def __call__(
self,
text: Union[TextInput, PreTokenizedInput, List[TextInput], List[PreTokenizedInput]],
text_pair: Optional[Union[TextInput, PreTokenizedInput, List[TextInput], List[PreTokenizedInput]]] = None,
add_special_tokens: bool = True,
padding: Union[bool, str, PaddingStrategy] = False,
truncation: Union[bool, str, TruncationStrategy] = False,
max_length: Optional[int] = None,
stride: int = 0,
is_split_into_words: bool = False,
pad_to_multiple_of: Optional[int] = None,
return_tensors: Optional[Union[str, TensorType]] = None,
return_token_type_ids: Optional[bool] = None,
return_attention_mask: Optional[bool] = None,
return_overflowing_tokens: bool = False,
return_special_tokens_mask: bool = False,
return_offsets_mapping: bool = False,
return_length: bool = False,
verbose: bool = True,
**kwargs
) -> BatchEncoding:
"""
Main method to tokenize and prepare for the model one or several sequence(s) or one or several pair(s) of
sequences.
Args:
text (`str`, `List[str]`, `List[List[str]]`):
The sequence or batch of sequences to be encoded. Each sequence can be a string or a list of strings
(pretokenized string). If the sequences are provided as list of strings (pretokenized), you must set
`is_split_into_words=True` (to lift the ambiguity with a batch of sequences).
text_pair (`str`, `List[str]`, `List[List[str]]`):
The sequence or batch of sequences to be encoded. Each sequence can be a string or a list of strings
(pretokenized string). If the sequences are provided as list of strings (pretokenized), you must set
`is_split_into_words=True` (to lift the ambiguity with a batch of sequences).
"""
# Input type checking for clearer error
def _is_valid_text_input(t):
if isinstance(t, str):
# Strings are fine
return True
elif isinstance(t, (list, tuple)):
# List are fine as long as they are...
if len(t) == 0:
# ... empty
return True
elif isinstance(t[0], str):
# ... list of strings
return True
elif isinstance(t[0], (list, tuple)):
# ... list with an empty list or with a list of strings
return len(t[0]) == 0 or isinstance(t[0][0], str)
else:
return False
else:
return False
if not _is_valid_text_input(text):
raise ValueError(
"text input must of type `str` (single example), `List[str]` (batch or single pretokenized example) "
"or `List[List[str]]` (batch of pretokenized examples)."
)
if text_pair is not None and not _is_valid_text_input(text_pair):
raise ValueError(
"text input must of type `str` (single example), `List[str]` (batch or single pretokenized example) "
"or `List[List[str]]` (batch of pretokenized examples)."
)
if is_split_into_words:
is_batched = isinstance(text, (list, tuple)) and text and isinstance(text[0], (list, tuple))
else:
is_batched = isinstance(text, (list, tuple))
if is_batched:
if isinstance(text_pair, str):
raise TypeError(
"when tokenizing batches of text, `text_pair` must be a list or tuple with the same length as `text`."
)
if text_pair is not None and len(text) != len(text_pair):
raise ValueError(
f"batch length of `text`: {len(text)} does not match batch length of `text_pair`: {len(text_pair)}."
)
batch_text_or_text_pairs = list(zip(text, text_pair)) if text_pair is not None else text
return self.batch_encode_plus(
batch_text_or_text_pairs=batch_text_or_text_pairs,
add_special_tokens=add_special_tokens,
padding=padding,
truncation=truncation,
max_length=max_length,
stride=stride,
is_split_into_words=is_split_into_words,
pad_to_multiple_of=pad_to_multiple_of,
return_tensors=return_tensors,
return_token_type_ids=return_token_type_ids,
return_attention_mask=return_attention_mask,
return_overflowing_tokens=return_overflowing_tokens,
return_special_tokens_mask=return_special_tokens_mask,
return_offsets_mapping=return_offsets_mapping,
return_length=return_length,
verbose=verbose,
**kwargs,
)
else:
return self.encode_plus(
text=text,
text_pair=text_pair,
add_special_tokens=add_special_tokens,
padding=padding,
truncation=truncation,
max_length=max_length,
stride=stride,
is_split_into_words=is_split_into_words,
pad_to_multiple_of=pad_to_multiple_of,
return_tensors=return_tensors,
return_token_type_ids=return_token_type_ids,
return_attention_mask=return_attention_mask,
return_overflowing_tokens=return_overflowing_tokens,
return_special_tokens_mask=return_special_tokens_mask,
return_offsets_mapping=return_offsets_mapping,
return_length=return_length,
verbose=verbose,
**kwargs,
)
@add_end_docstrings(ENCODE_KWARGS_DOCSTRING, ENCODE_PLUS_ADDITIONAL_KWARGS_DOCSTRING)
def encode_plus(
self,
text: Union[TextInput, PreTokenizedInput, EncodedInput],
text_pair: Optional[Union[TextInput, PreTokenizedInput, EncodedInput]] = None,
add_special_tokens: bool = True,
padding: Union[bool, str, PaddingStrategy] = False,
truncation: Union[bool, str, TruncationStrategy] = False,
max_length: Optional[int] = None,
stride: int = 0,
is_split_into_words: bool = False,
pad_to_multiple_of: Optional[int] = None,
return_tensors: Optional[Union[str, TensorType]] = None,
return_token_type_ids: Optional[bool] = None,
return_attention_mask: Optional[bool] = None,
return_overflowing_tokens: bool = False,
return_special_tokens_mask: bool = False,
return_offsets_mapping: bool = False,
return_length: bool = False,
verbose: bool = True,
**kwargs
) -> BatchEncoding:
"""
Tokenize and prepare for the model a sequence or a pair of sequences.
<Tip warning={true}>
This method is deprecated, `__call__` should be used instead.
</Tip>
Args:
text (`str`, `List[str]` or `List[int]` (the latter only for not-fast tokenizers)):
The first sequence to be encoded. This can be a string, a list of strings (tokenized string using the
`tokenize` method) or a list of integers (tokenized string ids using the `convert_tokens_to_ids`
method).
text_pair (`str`, `List[str]` or `List[int]`, *optional*):
Optional second sequence to be encoded. This can be a string, a list of strings (tokenized string using
the `tokenize` method) or a list of integers (tokenized string ids using the `convert_tokens_to_ids`
method).
"""
# Backward compatibility for 'truncation_strategy', 'pad_to_max_length'
padding_strategy, truncation_strategy, max_length, kwargs = self._get_padding_truncation_strategies(
padding=padding,
truncation=truncation,
max_length=max_length,
pad_to_multiple_of=pad_to_multiple_of,
verbose=verbose,
**kwargs,
)
return self._encode_plus(
text=text,
text_pair=text_pair,
add_special_tokens=add_special_tokens,
padding_strategy=padding_strategy,
truncation_strategy=truncation_strategy,
max_length=max_length,
stride=stride,
is_split_into_words=is_split_into_words,
pad_to_multiple_of=pad_to_multiple_of,
return_tensors=return_tensors,
return_token_type_ids=return_token_type_ids,
return_attention_mask=return_attention_mask,
return_overflowing_tokens=return_overflowing_tokens,
return_special_tokens_mask=return_special_tokens_mask,
return_offsets_mapping=return_offsets_mapping,
return_length=return_length,
verbose=verbose,
**kwargs,
)
def _encode_plus(
self,
text: Union[TextInput, PreTokenizedInput, EncodedInput],
text_pair: Optional[Union[TextInput, PreTokenizedInput, EncodedInput]] = None,
add_special_tokens: bool = True,
padding_strategy: PaddingStrategy = PaddingStrategy.DO_NOT_PAD,
truncation_strategy: TruncationStrategy = TruncationStrategy.DO_NOT_TRUNCATE,
max_length: Optional[int] = None,
stride: int = 0,
is_split_into_words: bool = False,
pad_to_multiple_of: Optional[int] = None,
return_tensors: Optional[Union[str, TensorType]] = None,
return_token_type_ids: Optional[bool] = None,
return_attention_mask: Optional[bool] = None,
return_overflowing_tokens: bool = False,
return_special_tokens_mask: bool = False,
return_offsets_mapping: bool = False,
return_length: bool = False,
verbose: bool = True,
**kwargs
) -> BatchEncoding:
raise NotImplementedError
@add_end_docstrings(ENCODE_KWARGS_DOCSTRING, ENCODE_PLUS_ADDITIONAL_KWARGS_DOCSTRING)
def batch_encode_plus(
self,
batch_text_or_text_pairs: Union[
List[TextInput],
List[TextInputPair],
List[PreTokenizedInput],
List[PreTokenizedInputPair],
List[EncodedInput],
List[EncodedInputPair],
],
add_special_tokens: bool = True,
padding: Union[bool, str, PaddingStrategy] = False,
truncation: Union[bool, str, TruncationStrategy] = False,
max_length: Optional[int] = None,
stride: int = 0,
is_split_into_words: bool = False,
pad_to_multiple_of: Optional[int] = None,
return_tensors: Optional[Union[str, TensorType]] = None,
return_token_type_ids: Optional[bool] = None,
return_attention_mask: Optional[bool] = None,
return_overflowing_tokens: bool = False,
return_special_tokens_mask: bool = False,
return_offsets_mapping: bool = False,
return_length: bool = False,
verbose: bool = True,
**kwargs
) -> BatchEncoding:
"""
Tokenize and prepare for the model a list of sequences or a list of pairs of sequences.
<Tip warning={true}>
This method is deprecated, `__call__` should be used instead.
</Tip>
Args:
batch_text_or_text_pairs (`List[str]`, `List[Tuple[str, str]]`, `List[List[str]]`, `List[Tuple[List[str], List[str]]]`, and for not-fast tokenizers, also `List[List[int]]`, `List[Tuple[List[int], List[int]]]`):
Batch of sequences or pair of sequences to be encoded. This can be a list of
string/string-sequences/int-sequences or a list of pair of string/string-sequences/int-sequence (see
details in `encode_plus`).
"""
# Backward compatibility for 'truncation_strategy', 'pad_to_max_length'
padding_strategy, truncation_strategy, max_length, kwargs = self._get_padding_truncation_strategies(
padding=padding,
truncation=truncation,
max_length=max_length,
pad_to_multiple_of=pad_to_multiple_of,
verbose=verbose,
**kwargs,
)
return self._batch_encode_plus(
batch_text_or_text_pairs=batch_text_or_text_pairs,
add_special_tokens=add_special_tokens,
padding_strategy=padding_strategy,
truncation_strategy=truncation_strategy,
max_length=max_length,
stride=stride,
is_split_into_words=is_split_into_words,
pad_to_multiple_of=pad_to_multiple_of,
return_tensors=return_tensors,
return_token_type_ids=return_token_type_ids,
return_attention_mask=return_attention_mask,
return_overflowing_tokens=return_overflowing_tokens,
return_special_tokens_mask=return_special_tokens_mask,
return_offsets_mapping=return_offsets_mapping,
return_length=return_length,
verbose=verbose,
**kwargs,
)
def _batch_encode_plus(
self,
batch_text_or_text_pairs: Union[
List[TextInput],
List[TextInputPair],
List[PreTokenizedInput],
List[PreTokenizedInputPair],
List[EncodedInput],
List[EncodedInputPair],
],
add_special_tokens: bool = True,
padding_strategy: PaddingStrategy = PaddingStrategy.DO_NOT_PAD,
truncation_strategy: TruncationStrategy = TruncationStrategy.DO_NOT_TRUNCATE,
max_length: Optional[int] = None,
stride: int = 0,
is_split_into_words: bool = False,
pad_to_multiple_of: Optional[int] = None,
return_tensors: Optional[Union[str, TensorType]] = None,
return_token_type_ids: Optional[bool] = None,
return_attention_mask: Optional[bool] = None,
return_overflowing_tokens: bool = False,
return_special_tokens_mask: bool = False,
return_offsets_mapping: bool = False,
return_length: bool = False,
verbose: bool = True,
**kwargs
) -> BatchEncoding:
raise NotImplementedError
def pad(
self,
encoded_inputs: Union[
BatchEncoding,
List[BatchEncoding],
Dict[str, EncodedInput],
Dict[str, List[EncodedInput]],
List[Dict[str, EncodedInput]],
],
padding: Union[bool, str, PaddingStrategy] = True,
max_length: Optional[int] = None,
pad_to_multiple_of: Optional[int] = None,
return_attention_mask: Optional[bool] = None,
return_tensors: Optional[Union[str, TensorType]] = None,
verbose: bool = True,
) -> BatchEncoding:
"""
Pad a single encoded input or a batch of encoded inputs up to predefined length or to the max sequence length
in the batch.
Padding side (left/right) padding token ids are defined at the tokenizer level (with `self.padding_side`,
`self.pad_token_id` and `self.pad_token_type_id`)
<Tip>
If the `encoded_inputs` passed are dictionary of numpy arrays, PyTorch tensors or TensorFlow tensors, the
result will use the same type unless you provide a different tensor type with `return_tensors`. In the case of
PyTorch tensors, you will lose the specific device of your tensors however.
</Tip>
Args:
encoded_inputs ([`BatchEncoding`], list of [`BatchEncoding`], `Dict[str, List[int]]`, `Dict[str, List[List[int]]` or `List[Dict[str, List[int]]]`):
Tokenized inputs. Can represent one input ([`BatchEncoding`] or `Dict[str, List[int]]`) or a batch of
tokenized inputs (list of [`BatchEncoding`], *Dict[str, List[List[int]]]* or *List[Dict[str,
List[int]]]*) so you can use this method during preprocessing as well as in a PyTorch Dataloader
collate function.
Instead of `List[int]` you can have tensors (numpy arrays, PyTorch tensors or TensorFlow tensors), see
the note above for the return type.
padding (`bool`, `str` or [`~file_utils.PaddingStrategy`], *optional*, defaults to `True`):
Select a strategy to pad the returned sequences (according to the model's padding side and padding
index) among:
- `True` or `'longest'`: Pad to the longest sequence in the batch (or no padding if only a single
sequence if provided).
- `'max_length'`: Pad to a maximum length specified with the argument `max_length` or to the maximum
acceptable input length for the model if that argument is not provided.
- `False` or `'do_not_pad'` (default): No padding (i.e., can output a batch with sequences of different
lengths).
max_length (`int`, *optional*):
Maximum length of the returned list and optionally padding length (see above).
pad_to_multiple_of (`int`, *optional*):
If set will pad the sequence to a multiple of the provided value.
This is especially useful to enable the use of Tensor Cores on NVIDIA hardware with compute capability
>= 7.5 (Volta).
return_attention_mask (`bool`, *optional*):
Whether to return the attention mask. If left to the default, will return the attention mask according
to the specific tokenizer's default, defined by the `return_outputs` attribute.
[What are attention masks?](../glossary#attention-mask)
return_tensors (`str` or [`~file_utils.TensorType`], *optional*):
If set, will return tensors instead of list of python integers. Acceptable values are:
- `'tf'`: Return TensorFlow `tf.constant` objects.
- `'pt'`: Return PyTorch `torch.Tensor` objects.
- `'np'`: Return Numpy `np.ndarray` objects.
verbose (`bool`, *optional*, defaults to `True`):
Whether or not to print more information and warnings.
"""
# If we have a list of dicts, let's convert it in a dict of lists
# We do this to allow using this method as a collate_fn function in PyTorch Dataloader
if isinstance(encoded_inputs, (list, tuple)) and isinstance(encoded_inputs[0], (dict, BatchEncoding)):
encoded_inputs = {key: [example[key] for example in encoded_inputs] for key in encoded_inputs[0].keys()}
# The model's main input name, usually `input_ids`, has be passed for padding
if self.model_input_names[0] not in encoded_inputs:
raise ValueError(
"You should supply an encoding or a list of encodings to this method "
f"that includes {self.model_input_names[0]}, but you provided {list(encoded_inputs.keys())}"
)
required_input = encoded_inputs[self.model_input_names[0]]
if not required_input:
if return_attention_mask:
encoded_inputs["attention_mask"] = []
return encoded_inputs
# If we have PyTorch/TF/NumPy tensors/arrays as inputs, we cast them as python objects
# and rebuild them afterwards if no return_tensors is specified
# Note that we lose the specific device the tensor may be on for PyTorch
first_element = required_input[0]
if isinstance(first_element, (list, tuple)):
# first_element might be an empty list/tuple in some edge cases so we grab the first non empty element.
for item in required_input:
if len(item) != 0:
first_element = item[0]
break
# At this state, if `first_element` is still a list/tuple, it's an empty one so there is nothing to do.
if not isinstance(first_element, (int, list, tuple)):
if is_tf_available() and _is_tensorflow(first_element):
return_tensors = "tf" if return_tensors is None else return_tensors
elif is_torch_available() and _is_torch(first_element):
return_tensors = "pt" if return_tensors is None else return_tensors
elif isinstance(first_element, np.ndarray):
return_tensors = "np" if return_tensors is None else return_tensors
else:
raise ValueError(
f"type of {first_element} unknown: {type(first_element)}. "
f"Should be one of a python, numpy, pytorch or tensorflow object."
)
for key, value in encoded_inputs.items():
encoded_inputs[key] = to_py_obj(value)
# Convert padding_strategy in PaddingStrategy
padding_strategy, _, max_length, _ = self._get_padding_truncation_strategies(
padding=padding, max_length=max_length, verbose=verbose
)
required_input = encoded_inputs[self.model_input_names[0]]
if required_input and not isinstance(required_input[0], (list, tuple)):
encoded_inputs = self._pad(
encoded_inputs,
max_length=max_length,
padding_strategy=padding_strategy,
pad_to_multiple_of=pad_to_multiple_of,
return_attention_mask=return_attention_mask,
)
return BatchEncoding(encoded_inputs, tensor_type=return_tensors)
batch_size = len(required_input)
assert all(
len(v) == batch_size for v in encoded_inputs.values()
), "Some items in the output dictionary have a different batch size than others."
if padding_strategy == PaddingStrategy.LONGEST:
max_length = max(len(inputs) for inputs in required_input)
padding_strategy = PaddingStrategy.MAX_LENGTH
batch_outputs = {}
for i in range(batch_size):
inputs = dict((k, v[i]) for k, v in encoded_inputs.items())
outputs = self._pad(
inputs,
max_length=max_length,
padding_strategy=padding_strategy,
pad_to_multiple_of=pad_to_multiple_of,
return_attention_mask=return_attention_mask,
)
for key, value in outputs.items():
if key not in batch_outputs:
batch_outputs[key] = []
batch_outputs[key].append(value)
return BatchEncoding(batch_outputs, tensor_type=return_tensors)
def create_token_type_ids_from_sequences(
self, token_ids_0: List[int], token_ids_1: Optional[List[int]] = None
) -> List[int]:
"""
Create the token type IDs corresponding to the sequences passed. [What are token type
IDs?](../glossary#token-type-ids)
Should be overridden in a subclass if the model has a special way of building those.
Args:
token_ids_0 (`List[int]`): The first tokenized sequence.
token_ids_1 (`List[int]`, *optional*): The second tokenized sequence.
Returns:
`List[int]`: The token type ids.
"""
if token_ids_1 is None:
return len(token_ids_0) * [0]
return [0] * len(token_ids_0) + [1] * len(token_ids_1)
def build_inputs_with_special_tokens(
self, token_ids_0: List[int], token_ids_1: Optional[List[int]] = None
) -> List[int]:
"""
Build model inputs from a sequence or a pair of sequence for sequence classification tasks by concatenating and
adding special tokens.
This implementation does not add special tokens and this method should be overridden in a subclass.
Args:
token_ids_0 (`List[int]`): The first tokenized sequence.
token_ids_1 (`List[int]`, *optional*): The second tokenized sequence.
Returns:
`List[int]`: The model input with special tokens.
"""
if token_ids_1 is None:
return token_ids_0
return token_ids_0 + token_ids_1
@add_end_docstrings(ENCODE_KWARGS_DOCSTRING, ENCODE_PLUS_ADDITIONAL_KWARGS_DOCSTRING)
def prepare_for_model(
self,
ids: List[int],
pair_ids: Optional[List[int]] = None,
add_special_tokens: bool = True,
padding: Union[bool, str, PaddingStrategy] = False,
truncation: Union[bool, str, TruncationStrategy] = False,
max_length: Optional[int] = None,
stride: int = 0,
pad_to_multiple_of: Optional[int] = None,
return_tensors: Optional[Union[str, TensorType]] = None,
return_token_type_ids: Optional[bool] = None,
return_attention_mask: Optional[bool] = None,
return_overflowing_tokens: bool = False,
return_special_tokens_mask: bool = False,
return_offsets_mapping: bool = False,
return_length: bool = False,
verbose: bool = True,
prepend_batch_axis: bool = False,
**kwargs
) -> BatchEncoding:
"""
Prepares a sequence of input id, or a pair of sequences of inputs ids so that it can be used by the model. It
adds special tokens, truncates sequences if overflowing while taking into account the special tokens and
manages a moving window (with user defined stride) for overflowing tokens. Please Note, for *pair_ids*
different than `None` and *truncation_strategy = longest_first* or `True`, it is not possible to return
overflowing tokens. Such a combination of arguments will raise an error.
Args:
ids (`List[int]`):
Tokenized input ids of the first sequence. Can be obtained from a string by chaining the `tokenize` and
`convert_tokens_to_ids` methods.
pair_ids (`List[int]`, *optional*):
Tokenized input ids of the second sequence. Can be obtained from a string by chaining the `tokenize`
and `convert_tokens_to_ids` methods.
"""
# Backward compatibility for 'truncation_strategy', 'pad_to_max_length'
padding_strategy, truncation_strategy, max_length, kwargs = self._get_padding_truncation_strategies(
padding=padding,
truncation=truncation,
max_length=max_length,
pad_to_multiple_of=pad_to_multiple_of,
verbose=verbose,
**kwargs,
)
pair = bool(pair_ids is not None)
len_ids = len(ids)
len_pair_ids = len(pair_ids) if pair else 0
if return_token_type_ids and not add_special_tokens:
raise ValueError(
"Asking to return token_type_ids while setting add_special_tokens to False "
"results in an undefined behavior. Please set add_special_tokens to True or "
"set return_token_type_ids to None."
)
if (
return_overflowing_tokens
and truncation_strategy == TruncationStrategy.LONGEST_FIRST
and pair_ids is not None
):
raise ValueError(
"Not possible to return overflowing tokens for pair of sequences with the "
"`longest_first`. Please select another truncation strategy than `longest_first`, "
"for instance `only_second` or `only_first`."
)
# Load from model defaults
if return_token_type_ids is None:
return_token_type_ids = "token_type_ids" in self.model_input_names
if return_attention_mask is None:
return_attention_mask = "attention_mask" in self.model_input_names
encoded_inputs = {}
# Compute the total size of the returned encodings
total_len = len_ids + len_pair_ids + (self.num_special_tokens_to_add(pair=pair) if add_special_tokens else 0)
# Truncation: Handle max sequence length
overflowing_tokens = []
if truncation_strategy != TruncationStrategy.DO_NOT_TRUNCATE and max_length and total_len > max_length:
ids, pair_ids, overflowing_tokens = self.truncate_sequences(
ids,
pair_ids=pair_ids,
num_tokens_to_remove=total_len - max_length,
truncation_strategy=truncation_strategy,
stride=stride,
)
if return_overflowing_tokens:
encoded_inputs["overflowing_tokens"] = overflowing_tokens
encoded_inputs["num_truncated_tokens"] = total_len - max_length
# Add special tokens
if add_special_tokens:
sequence = self.build_inputs_with_special_tokens(ids, pair_ids)
token_type_ids = self.create_token_type_ids_from_sequences(ids, pair_ids)
else:
sequence = ids + pair_ids if pair else ids
token_type_ids = [0] * len(ids) + ([0] * len(pair_ids) if pair else [])
# Build output dictionary
encoded_inputs["input_ids"] = sequence
if return_token_type_ids:
encoded_inputs["token_type_ids"] = token_type_ids
if return_special_tokens_mask:
if add_special_tokens:
encoded_inputs["special_tokens_mask"] = self.get_special_tokens_mask(ids, pair_ids)
else:
encoded_inputs["special_tokens_mask"] = [0] * len(sequence)
# Check lengths
self._eventual_warn_about_too_long_sequence(encoded_inputs["input_ids"], max_length, verbose)
# Padding
if padding_strategy != PaddingStrategy.DO_NOT_PAD or return_attention_mask:
encoded_inputs = self.pad(
encoded_inputs,
max_length=max_length,
padding=padding_strategy.value,
pad_to_multiple_of=pad_to_multiple_of,
return_attention_mask=return_attention_mask,
)
if return_length:
encoded_inputs["length"] = len(encoded_inputs["input_ids"])
batch_outputs = BatchEncoding(
encoded_inputs, tensor_type=return_tensors, prepend_batch_axis=prepend_batch_axis
)
return batch_outputs
def truncate_sequences(
self,
ids: List[int],
pair_ids: Optional[List[int]] = None,
num_tokens_to_remove: int = 0,
truncation_strategy: Union[str, TruncationStrategy] = "longest_first",
stride: int = 0,
) -> Tuple[List[int], List[int], List[int]]:
"""
Truncates a sequence pair in-place following the strategy.
Args:
ids (`List[int]`):
Tokenized input ids of the first sequence. Can be obtained from a string by chaining the `tokenize` and
`convert_tokens_to_ids` methods.
pair_ids (`List[int]`, *optional*):
Tokenized input ids of the second sequence. Can be obtained from a string by chaining the `tokenize`
and `convert_tokens_to_ids` methods.
num_tokens_to_remove (`int`, *optional*, defaults to 0):
Number of tokens to remove using the truncation strategy.
truncation_strategy (`str` or [`~tokenization_utils_base.TruncationStrategy`], *optional*, defaults to `False`):
The strategy to follow for truncation. Can be:
- `'longest_first'`: Truncate to a maximum length specified with the argument `max_length` or to the
maximum acceptable input length for the model if that argument is not provided. This will truncate
token by token, removing a token from the longest sequence in the pair if a pair of sequences (or a
batch of pairs) is provided.
- `'only_first'`: Truncate to a maximum length specified with the argument `max_length` or to the
maximum acceptable input length for the model if that argument is not provided. This will only
truncate the first sequence of a pair if a pair of sequences (or a batch of pairs) is provided.
- `'only_second'`: Truncate to a maximum length specified with the argument `max_length` or to the
maximum acceptable input length for the model if that argument is not provided. This will only
truncate the second sequence of a pair if a pair of sequences (or a batch of pairs) is provided.
- `'do_not_truncate'` (default): No truncation (i.e., can output batch with sequence lengths greater
than the model maximum admissible input size).
stride (`int`, *optional*, defaults to 0):
If set to a positive number, the overflowing tokens returned will contain some tokens from the main
sequence returned. The value of this argument defines the number of additional tokens.
Returns:
`Tuple[List[int], List[int], List[int]]`: The truncated `ids`, the truncated `pair_ids` and the list of
overflowing tokens. Note: The *longest_first* strategy returns empty list of overflowing tokens if a pair
of sequences (or a batch of pairs) is provided.
"""
if num_tokens_to_remove <= 0:
return ids, pair_ids, []
if not isinstance(truncation_strategy, TruncationStrategy):
truncation_strategy = TruncationStrategy(truncation_strategy)
overflowing_tokens = []
if truncation_strategy == TruncationStrategy.ONLY_FIRST or (
truncation_strategy == TruncationStrategy.LONGEST_FIRST and pair_ids is None
):
if len(ids) > num_tokens_to_remove:
window_len = min(len(ids), stride + num_tokens_to_remove)
if self.truncation_side == "left":
overflowing_tokens = ids[:window_len]
ids = ids[num_tokens_to_remove:]
elif self.truncation_side == "right":
overflowing_tokens = ids[-window_len:]
ids = ids[:-num_tokens_to_remove]
else:
raise ValueError(f"invalid truncation strategy: {self.truncation_side}, use 'left' or 'right'.")
else:
error_msg = (
f"We need to remove {num_tokens_to_remove} to truncate the input "
f"but the first sequence has a length {len(ids)}. "
)
if truncation_strategy == TruncationStrategy.ONLY_FIRST:
error_msg = (
error_msg + "Please select another truncation strategy than "
f"{truncation_strategy}, for instance 'longest_first' or 'only_second'."
)
logger.error(error_msg)
elif truncation_strategy == TruncationStrategy.LONGEST_FIRST:
logger.warning(
f"Be aware, overflowing tokens are not returned for the setting you have chosen,"
f" i.e. sequence pairs with the '{TruncationStrategy.LONGEST_FIRST.value}' "
f"truncation strategy. So the returned list will always be empty even if some "
f"tokens have been removed."
)
for _ in range(num_tokens_to_remove):
if pair_ids is None or len(ids) > len(pair_ids):
if self.truncation_side == "right":
ids = ids[:-1]
elif self.truncation_side == "left":
ids = ids[1:]
else:
raise ValueError("invalid truncation strategy:" + str(self.truncation_side))
else:
if self.truncation_side == "right":
pair_ids = pair_ids[:-1]
elif self.truncation_side == "left":
pair_ids = pair_ids[1:]
else:
raise ValueError("invalid truncation strategy:" + str(self.truncation_side))
elif truncation_strategy == TruncationStrategy.ONLY_SECOND and pair_ids is not None:
if len(pair_ids) > num_tokens_to_remove:
window_len = min(len(pair_ids), stride + num_tokens_to_remove)
if self.truncation_side == "right":
overflowing_tokens = pair_ids[-window_len:]
pair_ids = pair_ids[:-num_tokens_to_remove]
elif self.truncation_side == "left":
overflowing_tokens = pair_ids[:window_len]
pair_ids = pair_ids[num_tokens_to_remove:]
else:
raise ValueError("invalid truncation strategy:" + str(self.truncation_side))
else:
logger.error(
f"We need to remove {num_tokens_to_remove} to truncate the input "
f"but the second sequence has a length {len(pair_ids)}. "
f"Please select another truncation strategy than {truncation_strategy}, "
f"for instance 'longest_first' or 'only_first'."
)
return (ids, pair_ids, overflowing_tokens)
def _pad(
self,
encoded_inputs: Union[Dict[str, EncodedInput], BatchEncoding],
max_length: Optional[int] = None,
padding_strategy: PaddingStrategy = PaddingStrategy.DO_NOT_PAD,
pad_to_multiple_of: Optional[int] = None,
return_attention_mask: Optional[bool] = None,
) -> dict:
"""
Pad encoded inputs (on left/right and up to predefined length or max length in the batch)
Args:
encoded_inputs:
Dictionary of tokenized inputs (`List[int]`) or batch of tokenized inputs (`List[List[int]]`).
max_length: maximum length of the returned list and optionally padding length (see below).
Will truncate by taking into account the special tokens.
padding_strategy: PaddingStrategy to use for padding.
- PaddingStrategy.LONGEST Pad to the longest sequence in the batch
- PaddingStrategy.MAX_LENGTH: Pad to the max length (default)
- PaddingStrategy.DO_NOT_PAD: Do not pad
The tokenizer padding sides are defined in self.padding_side:
- 'left': pads on the left of the sequences
- 'right': pads on the right of the sequences
pad_to_multiple_of: (optional) Integer if set will pad the sequence to a multiple of the provided value.
This is especially useful to enable the use of Tensor Core on NVIDIA hardware with compute capability
>= 7.5 (Volta).
return_attention_mask:
(optional) Set to False to avoid returning attention mask (default: set to model specifics)
"""
# Load from model defaults
if return_attention_mask is None:
return_attention_mask = "attention_mask" in self.model_input_names
required_input = encoded_inputs[self.model_input_names[0]]
if padding_strategy == PaddingStrategy.LONGEST:
max_length = len(required_input)
if max_length is not None and pad_to_multiple_of is not None and (max_length % pad_to_multiple_of != 0):
max_length = ((max_length // pad_to_multiple_of) + 1) * pad_to_multiple_of
needs_to_be_padded = padding_strategy != PaddingStrategy.DO_NOT_PAD and len(required_input) != max_length
# Initialize attention mask if not present.
if return_attention_mask and "attention_mask" not in encoded_inputs:
encoded_inputs["attention_mask"] = [1] * len(required_input)
if needs_to_be_padded:
difference = max_length - len(required_input)
if self.padding_side == "right":
if return_attention_mask:
encoded_inputs["attention_mask"] = encoded_inputs["attention_mask"] + [0] * difference
if "token_type_ids" in encoded_inputs:
encoded_inputs["token_type_ids"] = (
encoded_inputs["token_type_ids"] + [self.pad_token_type_id] * difference
)
if "special_tokens_mask" in encoded_inputs:
encoded_inputs["special_tokens_mask"] = encoded_inputs["special_tokens_mask"] + [1] * difference
encoded_inputs[self.model_input_names[0]] = required_input + [self.pad_token_id] * difference
elif self.padding_side == "left":
if return_attention_mask:
encoded_inputs["attention_mask"] = [0] * difference + encoded_inputs["attention_mask"]
if "token_type_ids" in encoded_inputs:
encoded_inputs["token_type_ids"] = [self.pad_token_type_id] * difference + encoded_inputs[
"token_type_ids"
]
if "special_tokens_mask" in encoded_inputs:
encoded_inputs["special_tokens_mask"] = [1] * difference + encoded_inputs["special_tokens_mask"]
encoded_inputs[self.model_input_names[0]] = [self.pad_token_id] * difference + required_input
else:
raise ValueError("Invalid padding strategy:" + str(self.padding_side))
return encoded_inputs
def convert_tokens_to_string(self, tokens: List[str]) -> str:
"""
Converts a sequence of tokens in a single string. The most simple way to do it is `" ".join(tokens)` but we
often want to remove sub-word tokenization artifacts at the same time.
Args:
tokens (`List[str]`): The token to join in a string.
Returns:
`str`: The joined tokens.
"""
raise NotImplementedError
def batch_decode(
self,
sequences: Union[List[int], List[List[int]], "np.ndarray", "torch.Tensor", "tf.Tensor"],
skip_special_tokens: bool = False,
clean_up_tokenization_spaces: bool = True,
**kwargs
) -> List[str]:
"""
Convert a list of lists of token ids into a list of strings by calling decode.
Args:
sequences (`Union[List[int], List[List[int]], np.ndarray, torch.Tensor, tf.Tensor]`):
List of tokenized input ids. Can be obtained using the `__call__` method.
skip_special_tokens (`bool`, *optional*, defaults to `False`):
Whether or not to remove special tokens in the decoding.
clean_up_tokenization_spaces (`bool`, *optional*, defaults to `True`):
Whether or not to clean up the tokenization spaces.
kwargs (additional keyword arguments, *optional*):
Will be passed to the underlying model specific decode method.
Returns:
`List[str]`: The list of decoded sentences.
"""
return [
self.decode(
seq,
skip_special_tokens=skip_special_tokens,
clean_up_tokenization_spaces=clean_up_tokenization_spaces,
**kwargs,
)
for seq in sequences
]
def decode(
self,
token_ids: Union[int, List[int], "np.ndarray", "torch.Tensor", "tf.Tensor"],
skip_special_tokens: bool = False,
clean_up_tokenization_spaces: bool = True,
**kwargs
) -> str:
"""
Converts a sequence of ids in a string, using the tokenizer and vocabulary with options to remove special
tokens and clean up tokenization spaces.
Similar to doing `self.convert_tokens_to_string(self.convert_ids_to_tokens(token_ids))`.
Args:
token_ids (`Union[int, List[int], np.ndarray, torch.Tensor, tf.Tensor]`):
List of tokenized input ids. Can be obtained using the `__call__` method.
skip_special_tokens (`bool`, *optional*, defaults to `False`):
Whether or not to remove special tokens in the decoding.
clean_up_tokenization_spaces (`bool`, *optional*, defaults to `True`):
Whether or not to clean up the tokenization spaces.
kwargs (additional keyword arguments, *optional*):
Will be passed to the underlying model specific decode method.
Returns:
`str`: The decoded sentence.
"""
# Convert inputs to python lists
token_ids = to_py_obj(token_ids)
return self._decode(
token_ids=token_ids,
skip_special_tokens=skip_special_tokens,
clean_up_tokenization_spaces=clean_up_tokenization_spaces,
**kwargs,
)
def _decode(
self,
token_ids: Union[int, List[int]],
skip_special_tokens: bool = False,
clean_up_tokenization_spaces: bool = True,
**kwargs
) -> str:
raise NotImplementedError
def get_special_tokens_mask(
self, token_ids_0: List[int], token_ids_1: Optional[List[int]] = None, already_has_special_tokens: bool = False
) -> List[int]:
"""
Retrieves sequence ids from a token list that has no special tokens added. This method is called when adding
special tokens using the tokenizer `prepare_for_model` or `encode_plus` methods.
Args:
token_ids_0 (`List[int]`):
List of ids of the first sequence.
token_ids_1 (`List[int]`, *optional*):
List of ids of the second sequence.
already_has_special_tokens (`bool`, *optional*, defaults to `False`):
Whether or not the token list is already formatted with special tokens for the model.
Returns:
A list of integers in the range [0, 1]: 1 for a special token, 0 for a sequence token.
"""
assert already_has_special_tokens and token_ids_1 is None, (
"You cannot use ``already_has_special_tokens=False`` with this tokenizer. "
"Please use a slow (full python) tokenizer to activate this argument. "
"Or set `return_special_tokens_mask=True` when calling the encoding method "
"to get the special tokens mask in any tokenizer. "
)
all_special_ids = self.all_special_ids # cache the property
special_tokens_mask = [1 if token in all_special_ids else 0 for token in token_ids_0]
return special_tokens_mask
@staticmethod
def clean_up_tokenization(out_string: str) -> str:
"""
Clean up a list of simple English tokenization artifacts like spaces before punctuations and abbreviated forms.
Args:
out_string (`str`): The text to clean up.
Returns:
`str`: The cleaned-up string.
"""
out_string = (
out_string.replace(" .", ".")
.replace(" ?", "?")
.replace(" !", "!")
.replace(" ,", ",")
.replace(" ' ", "'")
.replace(" n't", "n't")
.replace(" 'm", "'m")
.replace(" 's", "'s")
.replace(" 've", "'ve")
.replace(" 're", "'re")
)
return out_string
def _eventual_warn_about_too_long_sequence(self, ids: List[int], max_length: Optional[int], verbose: bool):
"""
Depending on the input and internal state we might trigger a warning about a sequence that is too long for its
corresponding model
Args:
ids (`List[str]`): The ids produced by the tokenization
max_length (`int`, *optional*): The max_length desired (does not trigger a warning if it is set)
verbose (`bool`): Whether or not to print more information and warnings.
"""
if max_length is None and len(ids) > self.model_max_length and verbose:
if not self.deprecation_warnings.get("sequence-length-is-longer-than-the-specified-maximum", False):
logger.warning(
"Token indices sequence length is longer than the specified maximum sequence length "
f"for this model ({len(ids)} > {self.model_max_length}). Running this sequence through the model "
"will result in indexing errors"
)
self.deprecation_warnings["sequence-length-is-longer-than-the-specified-maximum"] = True
@contextmanager
def as_target_tokenizer(self):
"""
Temporarily sets the tokenizer for encoding the targets. Useful for tokenizer associated to
sequence-to-sequence models that need a slightly different processing for the labels.
"""
yield
@classmethod
def register_for_auto_class(cls, auto_class="AutoTokenizer"):
"""
Register this class with a given auto class. This should only be used for custom tokenizers as the ones in the
library are already mapped with `AutoTokenizer`.
<Tip warning={true}>
This API is experimental and may have some slight breaking changes in the next releases.
</Tip>
Args:
auto_class (`str` or `type`, *optional*, defaults to `"AutoTokenizer"`):
The auto class to register this new tokenizer with.
"""
if not isinstance(auto_class, str):
auto_class = auto_class.__name__
import transformers.models.auto as auto_module
if not hasattr(auto_module, auto_class):
raise ValueError(f"{auto_class} is not a valid auto class.")
cls._auto_class = auto_class
def prepare_seq2seq_batch(
self,
src_texts: List[str],
tgt_texts: Optional[List[str]] = None,
max_length: Optional[int] = None,
max_target_length: Optional[int] = None,
padding: str = "longest",
return_tensors: str = None,
truncation: bool = True,
**kwargs,
) -> BatchEncoding:
"""
Prepare model inputs for translation. For best performance, translate one sentence at a time.
Arguments:
src_texts (`List[str]`):
List of documents to summarize or source language texts.
tgt_texts (`list`, *optional*):
List of summaries or target language texts.
max_length (`int`, *optional*):
Controls the maximum length for encoder inputs (documents to summarize or source language texts) If
left unset or set to `None`, this will use the predefined model maximum length if a maximum length is
required by one of the truncation/padding parameters. If the model has no specific maximum input length
(like XLNet) truncation/padding to a maximum length will be deactivated.
max_target_length (`int`, *optional*):
Controls the maximum length of decoder inputs (target language texts or summaries) If left unset or set
to `None`, this will use the max_length value.
padding (`bool`, `str` or [`~file_utils.PaddingStrategy`], *optional*, defaults to `False`):
Activates and controls padding. Accepts the following values:
- `True` or `'longest'`: Pad to the longest sequence in the batch (or no padding if only a single
sequence if provided).
- `'max_length'`: Pad to a maximum length specified with the argument `max_length` or to the maximum
acceptable input length for the model if that argument is not provided.
- `False` or `'do_not_pad'` (default): No padding (i.e., can output a batch with sequences of different
lengths).
return_tensors (`str` or [`~file_utils.TensorType`], *optional*):
If set, will return tensors instead of list of python integers. Acceptable values are:
- `'tf'`: Return TensorFlow `tf.constant` objects.
- `'pt'`: Return PyTorch `torch.Tensor` objects.
- `'np'`: Return Numpy `np.ndarray` objects.
truncation (`bool`, `str` or [`~tokenization_utils_base.TruncationStrategy`], *optional*, defaults to `True`):
Activates and controls truncation. Accepts the following values:
- `True` or `'longest_first'`: Truncate to a maximum length specified with the argument `max_length` or
to the maximum acceptable input length for the model if that argument is not provided. This will
truncate token by token, removing a token from the longest sequence in the pair if a pair of
sequences (or a batch of pairs) is provided.
- `'only_first'`: Truncate to a maximum length specified with the argument `max_length` or to the
maximum acceptable input length for the model if that argument is not provided. This will only
truncate the first sequence of a pair if a pair of sequences (or a batch of pairs) is provided.
- `'only_second'`: Truncate to a maximum length specified with the argument `max_length` or to the
maximum acceptable input length for the model if that argument is not provided. This will only
truncate the second sequence of a pair if a pair of sequences (or a batch of pairs) is provided.
- `False` or `'do_not_truncate'` (default): No truncation (i.e., can output batch with sequence lengths
greater than the model maximum admissible input size).
**kwargs:
Additional keyword arguments passed along to `self.__call__`.
Return:
[`BatchEncoding`]: A [`BatchEncoding`] with the following fields:
- **input_ids** -- List of token ids to be fed to the encoder.
- **attention_mask** -- List of indices specifying which tokens should be attended to by the model.
- **labels** -- List of token ids for tgt_texts.
The full set of keys `[input_ids, attention_mask, labels]`, will only be returned if tgt_texts is passed.
Otherwise, input_ids, attention_mask will be the only keys.
"""
# docstyle-ignore
formatted_warning = """
`prepare_seq2seq_batch` is deprecated and will be removed in version 5 of HuggingFace Transformers. Use the regular
`__call__` method to prepare your inputs and the tokenizer under the `as_target_tokenizer` context manager to prepare
your targets.
Here is a short example:
model_inputs = tokenizer(src_texts, ...)
with tokenizer.as_target_tokenizer():
labels = tokenizer(tgt_texts, ...)
model_inputs["labels"] = labels["input_ids"]
See the documentation of your specific tokenizer for more details on the specific arguments to the tokenizer of choice.
For a more complete example, see the implementation of `prepare_seq2seq_batch`.
"""
warnings.warn(formatted_warning, FutureWarning)
# mBART-specific kwargs that should be ignored by other models.
kwargs.pop("src_lang", None)
kwargs.pop("tgt_lang", None)
if max_length is None:
max_length = self.model_max_length
model_inputs = self(
src_texts,
add_special_tokens=True,
return_tensors=return_tensors,
max_length=max_length,
padding=padding,
truncation=truncation,
**kwargs,
)
if tgt_texts is None:
return model_inputs
# Process tgt_texts
if max_target_length is None:
max_target_length = max_length
with self.as_target_tokenizer():
labels = self(
tgt_texts,
add_special_tokens=True,
return_tensors=return_tensors,
padding=padding,
max_length=max_target_length,
truncation=truncation,
**kwargs,
)
model_inputs["labels"] = labels["input_ids"]
return model_inputs
def get_fast_tokenizer_file(tokenization_files: List[str]) -> str:
"""
Get the tokenization file to use for this version of transformers.
Args:
tokenization_files (`List[str]`): The list of available configuration files.
Returns:
`str`: The tokenization file to use.
"""
tokenizer_files_map = {}
for file_name in tokenization_files:
search = _re_tokenizer_file.search(file_name)
if search is not None:
v = search.groups()[0]
tokenizer_files_map[v] = file_name
available_versions = sorted(tokenizer_files_map.keys())
# Defaults to FULL_TOKENIZER_FILE and then try to look at some newer versions.
tokenizer_file = FULL_TOKENIZER_FILE
transformers_version = version.parse(__version__)
for v in available_versions:
if version.parse(v) <= transformers_version:
tokenizer_file = tokenizer_files_map[v]
else:
# No point going further since the versions are sorted.
break
return tokenizer_file
# To update the docstring, we need to copy the method, otherwise we change the original docstring.
PreTrainedTokenizerBase.push_to_hub = copy_func(PreTrainedTokenizerBase.push_to_hub)
PreTrainedTokenizerBase.push_to_hub.__doc__ = PreTrainedTokenizerBase.push_to_hub.__doc__.format(
object="tokenizer", object_class="AutoTokenizer", object_files="tokenizer files"
)
| 170,242 | 46.36867 | 222 | py |
robust-transformers | robust-transformers-main/src/transformers/convert_tf_hub_seq_to_seq_bert_to_pytorch.py | # coding=utf-8
# Copyright 2020 The HuggingFace Inc. team.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
"""Convert Seq2Seq TF Hub checkpoint."""
import argparse
from . import (
BertConfig,
BertGenerationConfig,
BertGenerationDecoder,
BertGenerationEncoder,
load_tf_weights_in_bert_generation,
logging,
)
logging.set_verbosity_info()
def convert_tf_checkpoint_to_pytorch(tf_hub_path, pytorch_dump_path, is_encoder_named_decoder, vocab_size, is_encoder):
# Initialise PyTorch model
bert_config = BertConfig.from_pretrained(
"bert-large-cased",
vocab_size=vocab_size,
max_position_embeddings=512,
is_decoder=True,
add_cross_attention=True,
)
bert_config_dict = bert_config.to_dict()
del bert_config_dict["type_vocab_size"]
config = BertGenerationConfig(**bert_config_dict)
if is_encoder:
model = BertGenerationEncoder(config)
else:
model = BertGenerationDecoder(config)
print(f"Building PyTorch model from configuration: {config}")
# Load weights from tf checkpoint
load_tf_weights_in_bert_generation(
model,
tf_hub_path,
model_class="bert",
is_encoder_named_decoder=is_encoder_named_decoder,
is_encoder=is_encoder,
)
# Save pytorch-model
print(f"Save PyTorch model and config to {pytorch_dump_path}")
model.save_pretrained(pytorch_dump_path)
if __name__ == "__main__":
parser = argparse.ArgumentParser()
# Required parameters
parser.add_argument(
"--tf_hub_path", default=None, type=str, required=True, help="Path to the TensorFlow checkpoint path."
)
parser.add_argument(
"--pytorch_dump_path", default=None, type=str, required=True, help="Path to the output PyTorch model."
)
parser.add_argument(
"--is_encoder_named_decoder",
action="store_true",
help="If decoder has to be renamed to encoder in PyTorch model.",
)
parser.add_argument("--is_encoder", action="store_true", help="If model is an encoder.")
parser.add_argument("--vocab_size", default=50358, type=int, help="Vocab size of model")
args = parser.parse_args()
convert_tf_checkpoint_to_pytorch(
args.tf_hub_path,
args.pytorch_dump_path,
args.is_encoder_named_decoder,
args.vocab_size,
is_encoder=args.is_encoder,
)
| 2,899 | 31.58427 | 119 | py |
robust-transformers | robust-transformers-main/src/transformers/trainer_dro_ga.py | # coding=utf-8
# Copyright 2020-present the HuggingFace Inc. team.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
"""
The Trainer class, to easily train a 🤗 Transformers from scratch or finetune it on a new task.
"""
import contextlib
import inspect
import math
import os
from attr import dataclass
import pandas as pd
import random
import re
import shutil
import sys
import time
import warnings
from collections.abc import Mapping
from pathlib import Path
from typing import TYPE_CHECKING, Any, Callable, Dict, List, Optional, Tuple, Union
from tqdm.auto import tqdm
# Integrations must be imported before ML frameworks:
from .integrations import ( # isort: split
default_hp_search_backend,
get_reporting_integration_callbacks,
hp_params,
is_fairscale_available,
is_optuna_available,
is_ray_tune_available,
is_sigopt_available,
is_wandb_available,
run_hp_search_optuna,
run_hp_search_ray,
run_hp_search_sigopt,
run_hp_search_wandb,
)
import numpy as np
import torch
from packaging import version
from torch import Tensor, nn
from torch.utils.data import DataLoader, Dataset, RandomSampler, SequentialSampler, BatchSampler
from torch.utils.data.distributed import DistributedSampler
from torch.utils.data.sampler import WeightedRandomSampler
from huggingface_hub import Repository
from . import __version__
from .configuration_utils import PretrainedConfig
from .data.data_collator import DataCollator, DataCollatorWithPadding, default_data_collator
from .debug_utils import DebugOption, DebugUnderflowOverflow
from .deepspeed import deepspeed_init, deepspeed_reinit, is_deepspeed_zero3_enabled
from .dependency_versions_check import dep_version_check
from .file_utils import (
CONFIG_NAME,
WEIGHTS_NAME,
get_full_repo_name,
is_apex_available,
is_datasets_available,
is_in_notebook,
is_sagemaker_dp_enabled,
is_sagemaker_mp_enabled,
is_torch_tpu_available,
)
from .modelcard import TrainingSummary
from .modeling_utils import PreTrainedModel, unwrap_model
from .models.auto.modeling_auto import MODEL_FOR_QUESTION_ANSWERING_MAPPING_NAMES
from .optimization import Adafactor, get_scheduler
from .tokenization_utils_base import PreTrainedTokenizerBase
from .trainer_callback import (
CallbackHandler,
DefaultFlowCallback,
PrinterCallback,
ProgressCallback,
TrainerCallback,
TrainerControl,
TrainerState,
)
from .trainer_pt_utils import (
DistributedLengthGroupedSampler,
DistributedSamplerWithLoop,
DistributedTensorGatherer,
IterableDatasetShard,
LabelSmoother,
LengthGroupedSampler,
SequentialDistributedSampler,
ShardSampler,
distributed_broadcast_scalars,
distributed_concat,
find_batch_size,
get_parameter_names,
nested_concat,
nested_detach,
nested_numpify,
nested_truncate,
nested_xla_mesh_reduce,
reissue_pt_warnings,
)
from .trainer_utils import (
PREFIX_CHECKPOINT_DIR,
BestRun,
EvalLoopOutput,
EvalPrediction,
HPSearchBackend,
HubStrategy,
IntervalStrategy,
PredictionOutput,
ShardedDDPOption,
TrainerMemoryTracker,
TrainOutput,
default_compute_objective,
default_hp_space,
denumpify_detensorize,
get_last_checkpoint,
has_length,
number_of_arguments,
set_seed,
speed_metrics,
)
from .training_args import OptimizerNames, ParallelMode, TrainingArguments
from .utils import logging
from .dro_loss import LossComputer, DroArguments
from .cgd_loss import CGDLossComputer
from .gcdro_loss_ga import GCDROLossComputerWithGA
from transformers import dro_loss
_is_torch_generator_available = False
_is_native_amp_available = False
DEFAULT_CALLBACKS = [DefaultFlowCallback]
DEFAULT_PROGRESS_CALLBACK = ProgressCallback
if is_in_notebook():
from .utils.notebook import NotebookProgressCallback
DEFAULT_PROGRESS_CALLBACK = NotebookProgressCallback
if is_apex_available():
from apex import amp
if version.parse(torch.__version__) >= version.parse("1.6"):
_is_torch_generator_available = True
_is_native_amp_available = True
from torch.cuda.amp import autocast
if is_datasets_available():
import datasets
if is_torch_tpu_available():
import torch_xla.core.xla_model as xm
import torch_xla.debug.metrics as met
import torch_xla.distributed.parallel_loader as pl
if is_fairscale_available():
dep_version_check("fairscale")
import fairscale
from fairscale.nn.data_parallel import FullyShardedDataParallel as FullyShardedDDP
from fairscale.nn.data_parallel import ShardedDataParallel as ShardedDDP
from fairscale.nn.wrap import auto_wrap
from fairscale.optim import OSS
from fairscale.optim.grad_scaler import ShardedGradScaler
if is_sagemaker_dp_enabled():
import smdistributed.dataparallel.torch.distributed as dist
from smdistributed.dataparallel.torch.parallel.distributed import DistributedDataParallel as DDP
else:
import torch.distributed as dist
if is_sagemaker_mp_enabled():
import smdistributed.modelparallel.torch as smp
from .trainer_pt_utils import smp_forward_backward, smp_forward_only, smp_gather, smp_nested_concat
if TYPE_CHECKING:
import optuna
logger = logging.get_logger(__name__)
# Name of the files used for checkpointing
TRAINING_ARGS_NAME = "training_args.bin"
TRAINER_STATE_NAME = "trainer_state.json"
OPTIMIZER_NAME = "optimizer.pt"
SCHEDULER_NAME = "scheduler.pt"
SCALER_NAME = "scaler.pt"
class TrainerDroGA:
"""
Trainer is a simple but feature-complete training and eval loop for PyTorch, optimized for 🤗 Transformers.
Args:
model ([`PreTrainedModel`] or `torch.nn.Module`, *optional*):
The model to train, evaluate or use for predictions. If not provided, a `model_init` must be passed.
<Tip>
[`Trainer`] is optimized to work with the [`PreTrainedModel`] provided by the library. You can still use
your own models defined as `torch.nn.Module` as long as they work the same way as the 🤗 Transformers
models.
</Tip>
args ([`TrainingArguments`], *optional*):
The arguments to tweak for training. Will default to a basic instance of [`TrainingArguments`] with the
`output_dir` set to a directory named *tmp_trainer* in the current directory if not provided.
data_collator (`DataCollator`, *optional*):
The function to use to form a batch from a list of elements of `train_dataset` or `eval_dataset`. Will
default to [`default_data_collator`] if no `tokenizer` is provided, an instance of
[`DataCollatorWithPadding`] otherwise.
train_dataset (`torch.utils.data.Dataset` or `torch.utils.data.IterableDataset`, *optional*):
The dataset to use for training. If it is an `datasets.Dataset`, columns not accepted by the
`model.forward()` method are automatically removed.
Note that if it's a `torch.utils.data.IterableDataset` with some randomization and you are training in a
distributed fashion, your iterable dataset should either use a internal attribute `generator` that is a
`torch.Generator` for the randomization that must be identical on all processes (and the Trainer will
manually set the seed of this `generator` at each epoch) or have a `set_epoch()` method that internally
sets the seed of the RNGs used.
eval_dataset (`torch.utils.data.Dataset`, *optional*):
The dataset to use for evaluation. If it is an `datasets.Dataset`, columns not accepted by the
`model.forward()` method are automatically removed.
tokenizer ([`PreTrainedTokenizerBase`], *optional*):
The tokenizer used to preprocess the data. If provided, will be used to automatically pad the inputs the
maximum length when batching inputs, and it will be saved along the model to make it easier to rerun an
interrupted training or reuse the fine-tuned model.
model_init (`Callable[[], PreTrainedModel]`, *optional*):
A function that instantiates the model to be used. If provided, each call to [`~Trainer.train`] will start
from a new instance of the model as given by this function.
The function may have zero argument, or a single one containing the optuna/Ray Tune/SigOpt trial object, to
be able to choose different architectures according to hyper parameters (such as layer count, sizes of
inner layers, dropout probabilities etc).
compute_metrics (`Callable[[EvalPrediction], Dict]`, *optional*):
The function that will be used to compute metrics at evaluation. Must take a [`EvalPrediction`] and return
a dictionary string to metric values.
callbacks (List of [`TrainerCallback`], *optional*):
A list of callbacks to customize the training loop. Will add those to the list of default callbacks
detailed in [here](callback).
If you want to remove one of the default callbacks used, use the [`Trainer.remove_callback`] method.
optimizers (`Tuple[torch.optim.Optimizer, torch.optim.lr_scheduler.LambdaLR]`, *optional*): A tuple
containing the optimizer and the scheduler to use. Will default to an instance of [`AdamW`] on your model
and a scheduler given by [`get_linear_schedule_with_warmup`] controlled by `args`.
preprocess_logits_for_metrics (`Callable[[torch.Tensor, torch.Tensor], torch.Tensor]`, *optional*):
A function that preprocess the logits right before caching them at each evaluation step. Must take two
tensors, the logits and the labels, and return the logits once processed as desired. The modifications made
by this function will be reflected in the predictions received by `compute_metrics`.
Note that the labels (second parameter) will be `None` if the dataset does not have them.
Important attributes:
- **model** -- Always points to the core model. If using a transformers model, it will be a [`PreTrainedModel`]
subclass.
- **model_wrapped** -- Always points to the most external model in case one or more other modules wrap the
original model. This is the model that should be used for the forward pass. For example, under `DeepSpeed`,
the inner model is wrapped in `DeepSpeed` and then again in `torch.nn.DistributedDataParallel`. If the inner
model hasn't been wrapped, then `self.model_wrapped` is the same as `self.model`.
- **is_model_parallel** -- Whether or not a model has been switched to a model parallel mode (different from
data parallelism, this means some of the model layers are split on different GPUs).
- **place_model_on_device** -- Whether or not to automatically place the model on the device - it will be set
to `False` if model parallel or deepspeed is used, or if the default
`TrainingArguments.place_model_on_device` is overridden to return `False` .
- **is_in_train** -- Whether or not a model is currently running `train` (e.g. when `evaluate` is called while
in `train`)
"""
from .trainer_pt_utils import _get_learning_rate, log_metrics, metrics_format, save_metrics, save_state
def __init__(
self,
model: Union[PreTrainedModel, nn.Module] = None,
args: TrainingArguments = None,
dro_args: DroArguments = None,
data_collator: Optional[DataCollator] = None,
train_dataset: Optional[Dataset] = None,
eval_dataset: Optional[Dataset] = None,
tokenizer: Optional[PreTrainedTokenizerBase] = None,
model_init: Callable[[], PreTrainedModel] = None,
compute_metrics: Optional[Callable[[EvalPrediction], Dict]] = None,
callbacks: Optional[List[TrainerCallback]] = None,
optimizers: Tuple[torch.optim.Optimizer, torch.optim.lr_scheduler.LambdaLR] = (None, None),
preprocess_logits_for_metrics: Callable[[torch.Tensor, torch.Tensor], torch.Tensor] = None,
):
if args is None:
output_dir = "tmp_trainer"
logger.info(f"No `TrainingArguments` passed, using `output_dir={output_dir}`.")
args = TrainingArguments(output_dir=output_dir)
self.args = args
# Seed must be set before instantiating the model when using model
set_seed(self.args.seed)
self.hp_name = None
self.deepspeed = None
self.is_in_train = False
# memory metrics - must set up as early as possible
self._memory_tracker = TrainerMemoryTracker(self.args.skip_memory_metrics)
self._memory_tracker.start()
# set the correct log level depending on the node
log_level = args.get_process_log_level()
logging.set_verbosity(log_level)
# force device and distributed setup init explicitly
args._setup_devices
if model is None:
if model_init is not None:
self.model_init = model_init
model = self.call_model_init()
else:
raise RuntimeError("`Trainer` requires either a `model` or `model_init` argument")
else:
if model_init is not None:
warnings.warn(
"`Trainer` requires either a `model` or `model_init` argument, but not both. "
"`model_init` will overwrite your model when calling the `train` method. This will become a fatal error in the next release.",
FutureWarning,
)
self.model_init = model_init
if hasattr(model, "is_parallelizable") and model.is_parallelizable and model.model_parallel:
self.is_model_parallel = True
else:
self.is_model_parallel = False
# Setup Sharded DDP training
self.sharded_ddp = None
if len(args.sharded_ddp) > 0:
if args.deepspeed:
raise ValueError(
"Using --sharded_ddp xxx together with --deepspeed is not possible, deactivate one of those flags."
)
if args.local_rank == -1:
raise ValueError("Using sharded DDP only works in distributed training.")
elif not is_fairscale_available():
raise ImportError("Sharded DDP training requires fairscale: `pip install fairscale`.")
elif ShardedDDPOption.SIMPLE not in args.sharded_ddp and FullyShardedDDP is None:
raise ImportError(
"Sharded DDP in a mode other than simple training requires fairscale version >= 0.3, found "
f"{fairscale.__version__}. Upgrade your fairscale library: `pip install --upgrade fairscale`."
)
elif ShardedDDPOption.SIMPLE in args.sharded_ddp:
self.sharded_ddp = ShardedDDPOption.SIMPLE
elif ShardedDDPOption.ZERO_DP_2 in args.sharded_ddp:
self.sharded_ddp = ShardedDDPOption.ZERO_DP_2
elif ShardedDDPOption.ZERO_DP_3 in args.sharded_ddp:
self.sharded_ddp = ShardedDDPOption.ZERO_DP_3
# one place to sort out whether to place the model on device or not
# postpone switching model to cuda when:
# 1. MP - since we are trying to fit a much bigger than 1 gpu model
# 2. fp16-enabled DeepSpeed loads the model in half the size and it doesn't need .to() anyway,
# and we only use deepspeed for training at the moment
# 3. full bf16 or fp16 eval - since the model needs to be cast to the right dtype first
# 4. Sharded DDP - same as MP
self.place_model_on_device = args.place_model_on_device
if (
self.is_model_parallel
or args.deepspeed
or ((args.fp16_full_eval or args.bf16_full_eval) and not args.do_train)
or (self.sharded_ddp in [ShardedDDPOption.ZERO_DP_2, ShardedDDPOption.ZERO_DP_3])
):
self.place_model_on_device = False
default_collator = default_data_collator if tokenizer is None else DataCollatorWithPadding(tokenizer)
self.data_collator = data_collator if data_collator is not None else default_collator
self.train_dataset = train_dataset
self.eval_dataset = eval_dataset
self.tokenizer = tokenizer
if self.place_model_on_device:
self._move_model_to_device(model, args.device)
# Force n_gpu to 1 to avoid DataParallel as MP will manage the GPUs
if self.is_model_parallel:
self.args._n_gpu = 1
# later use `self.model is self.model_wrapped` to check if it's wrapped or not
self.model_wrapped = model
self.model = model
self.compute_metrics = compute_metrics
self.preprocess_logits_for_metrics = preprocess_logits_for_metrics
self.optimizer, self.lr_scheduler = optimizers
if model_init is not None and (self.optimizer is not None or self.lr_scheduler is not None):
raise RuntimeError(
"Passing a `model_init` is incompatible with providing the `optimizers` argument. "
"You should subclass `Trainer` and override the `create_optimizer_and_scheduler` method."
)
default_callbacks = DEFAULT_CALLBACKS + get_reporting_integration_callbacks(self.args.report_to)
callbacks = default_callbacks if callbacks is None else default_callbacks + callbacks
self.callback_handler = CallbackHandler(
callbacks, self.model, self.tokenizer, self.optimizer, self.lr_scheduler
)
self.add_callback(PrinterCallback if self.args.disable_tqdm else DEFAULT_PROGRESS_CALLBACK)
# Will be set to True by `self._setup_loggers()` on first call to `self.log()`.
self._loggers_initialized = False
if self.args.should_save:
os.makedirs(self.args.output_dir, exist_ok=True)
if not callable(self.data_collator) and callable(getattr(self.data_collator, "collate_batch", None)):
raise ValueError("The `data_collator` should be a simple callable (function, class with `__call__`).")
if args.max_steps > 0:
logger.info("max_steps is given, it will override any value given in num_train_epochs")
if train_dataset is not None and not has_length(train_dataset) and args.max_steps <= 0:
raise ValueError("train_dataset does not implement __len__, max_steps has to be specified")
if (
train_dataset is not None
and isinstance(train_dataset, torch.utils.data.IterableDataset)
and args.group_by_length
):
raise ValueError("the `--group_by_length` option is only available for `Dataset`, not `IterableDataset")
self._signature_columns = None
# Mixed precision setup
self.use_apex = False
self.use_amp = False
if args.fp16 or args.bf16:
if args.half_precision_backend == "auto":
if _is_native_amp_available:
args.half_precision_backend = "amp"
else:
if args.bf16:
raise ValueError("Tried to use `bf16` but native amp is not available")
else:
args.half_precision_backend = "apex"
logger.info(f"Using {args.half_precision_backend} half precision backend")
self.do_grad_scaling = False
if (args.fp16 or args.bf16) and not args.deepspeed: # deepspeed manages its own half precision
if args.half_precision_backend == "amp":
self.use_amp = True
self.amp_dtype = torch.float16 if args.fp16 else torch.bfloat16
self.do_grad_scaling = True
if is_sagemaker_mp_enabled():
self.scaler = smp.amp.GradScaler()
elif self.sharded_ddp is not None:
self.scaler = ShardedGradScaler()
elif is_torch_tpu_available():
from torch_xla.amp import GradScaler
self.scaler = GradScaler()
else:
self.scaler = torch.cuda.amp.GradScaler()
else:
if not is_apex_available():
raise ImportError(
"Using FP16 with APEX but APEX is not installed, please refer to https://www.github.com/nvidia/apex."
)
self.use_apex = True
# FP16 + model parallelism in SageMaker: gradient clipping does not work for now so we raise a helpful error.
if is_sagemaker_mp_enabled() and self.use_amp and args.max_grad_norm is not None and args.max_grad_norm > 0:
raise ValueError(
"SageMaker Model Parallelism in mixed precision mode does not support gradient clipping yet. Pass "
"along 'max_grad_norm': 0 in your hyperparameters."
)
# Label smoothing
if self.args.label_smoothing_factor != 0:
self.label_smoother = LabelSmoother(epsilon=self.args.label_smoothing_factor)
else:
self.label_smoother = None
self.state = TrainerState()
self.control = TrainerControl()
# Internal variable to count flos in each process, will be accumulated in `self.state.total_flos` then
# returned to 0 every time flos need to be logged
self.current_flos = 0
self.hp_search_backend = None
self.use_tune_checkpoints = False
default_label_names = (
["start_positions", "end_positions"]
if type(self.model).__name__ in MODEL_FOR_QUESTION_ANSWERING_MAPPING_NAMES.values()
else ["labels"]
)
self.label_names = default_label_names if self.args.label_names is None else self.args.label_names
self.control = self.callback_handler.on_init_end(self.args, self.state, self.control)
# very last
self._memory_tracker.stop_and_update_metrics()
# Create a DroLossClass object to maintain consistent information across epochs.
self.dro_args = dro_args
adjustments = [float(c) for c in dro_args.generalization_adjustment.split(',')]
assert len(adjustments) in (1, dro_args.n_groups)
if len(adjustments)==1:
adjustments = np.array(adjustments* dro_args.n_groups)
else:
adjustments = np.array(adjustments)
if dro_args.is_robust:
if dro_args.robust_algorithm == "GDRO":
self.train_loss_computer = LossComputer(
dro_args=dro_args,
training_args=args,
# dataset=dataset['train_data'], ## Why is this needed? to compute n_groups, group_counts which are passed as arguments now.
n_groups=dro_args.n_groups,
group_counts= dro_args.group_counts,
adj=adjustments)
elif dro_args.robust_algorithm == "CGD":
params = []
select = ['layer.10', 'layer.11', 'roberta.pooler.dense', 'classifier']
for name, param in self.model.named_parameters():
for s in select:
if (name.find(s) >= 0):
params.append(param)
break
self.train_loss_computer = CGDLossComputer(
dro_args=dro_args,
training_args=args,
# dataset=dataset['train_data'], ## Why is this needed? to compute n_groups, group_counts which are passed as arguments now.
n_groups=dro_args.n_groups,
group_counts= dro_args.group_counts,
params = params,
adj=adjustments)
elif dro_args.robust_algorithm == "GCDRO":
## In order to do instance reweighting at the end of every epoch, Dataset object will have to be separately defined?
self.train_loss_computer = GCDROLossComputerWithGA(
dro_args=dro_args,
training_args=args,
# dataset=dataset['train_data'], ## Why is this needed? to compute n_groups, group_counts which are passed as arguments now.
n_groups=dro_args.n_groups,
group_counts= dro_args.group_counts,
adj=adjustments)
self._add_columns()
def add_callback(self, callback):
"""
Add a callback to the current list of [`~transformer.TrainerCallback`].
Args:
callback (`type` or [`~transformer.TrainerCallback`]):
A [`~transformer.TrainerCallback`] class or an instance of a [`~transformer.TrainerCallback`]. In the
first case, will instantiate a member of that class.
"""
self.callback_handler.add_callback(callback)
def pop_callback(self, callback):
"""
Remove a callback from the current list of [`~transformer.TrainerCallback`] and returns it.
If the callback is not found, returns `None` (and no error is raised).
Args:
callback (`type` or [`~transformer.TrainerCallback`]):
A [`~transformer.TrainerCallback`] class or an instance of a [`~transformer.TrainerCallback`]. In the
first case, will pop the first member of that class found in the list of callbacks.
Returns:
[`~transformer.TrainerCallback`]: The callback removed, if found.
"""
return self.callback_handler.pop_callback(callback)
def remove_callback(self, callback):
"""
Remove a callback from the current list of [`~transformer.TrainerCallback`].
Args:
callback (`type` or [`~transformer.TrainerCallback`]):
A [`~transformer.TrainerCallback`] class or an instance of a [`~transformer.TrainerCallback`]. In the
first case, will remove the first member of that class found in the list of callbacks.
"""
self.callback_handler.remove_callback(callback)
def _move_model_to_device(self, model, device):
model = model.to(device)
# Moving a model to an XLA device disconnects the tied weights, so we have to retie them.
if self.args.parallel_mode == ParallelMode.TPU and hasattr(model, "tie_weights"):
model.tie_weights()
def _remove_unused_columns(self, dataset: "datasets.Dataset", description: Optional[str] = None):
if not self.args.remove_unused_columns:
return dataset
if self._signature_columns is None:
# Inspect model forward signature to keep only the arguments it accepts.
signature = inspect.signature(self.model.forward)
self._signature_columns = list(signature.parameters.keys())
# Labels may be named label or label_ids, the default data collator handles that.
self._signature_columns += ["label", "label_ids"]
self._signature_columns += ["guid"]
self._signature_columns += ["group"]
self._signature_columns += ["group_distribution"]
self._signature_columns += ["instance_weight"]
ignored_columns = list(set(dataset.column_names) - set(self._signature_columns))
if len(ignored_columns) > 0:
dset_description = "" if description is None else f"in the {description} set "
logger.info(
f"The following columns {dset_description} don't have a corresponding argument in "
f"`{self.model.__class__.__name__}.forward` and have been ignored: {', '.join(ignored_columns)}."
f" If {', '.join(ignored_columns)} are not expected by `{self.model.__class__.__name__}.forward`, "
f" you can safely ignore this message."
)
columns = [k for k in self._signature_columns if k in dataset.column_names]
if version.parse(datasets.__version__) < version.parse("1.4.0"):
dataset.set_format(
type=dataset.format["type"], columns=columns, format_kwargs=dataset.format["format_kwargs"]
)
return dataset
else:
return dataset.remove_columns(ignored_columns)
def _add_columns(self):
seed = self.args.seed
epoch = 0
# Check if evaluating.
if self.train_dataset is not None:
instance_weights = self.train_loss_computer.compute_beta_cover(seed, epoch, self.train_dataset)
self.train_dataset = self.train_dataset.add_column("instance_weight", instance_weights)
def _update_columns(self, epoch):
# Iterate over training data to compute loss.
logger.info(f"---- Re-Weight at the begeinning of epoch {epoch} -----")
train_losses = None
dataset = self._remove_unused_columns(self.train_dataset, description="evaluation")
dataloader = DataLoader(
dataset,
sampler=SequentialSampler(dataset),
batch_size=self.args.train_batch_size,
collate_fn=self.data_collator,
drop_last=False,
num_workers=self.args.dataloader_num_workers,
pin_memory=self.args.dataloader_pin_memory,
)
model = self._wrap_model(self.model, training=False)
model.eval()
for step, inputs in tqdm(enumerate(dataloader)):
inputs = self._prepare_inputs(inputs)
with torch.no_grad():
groups = inputs["group"]
group_distributions = inputs.get("group_distribution", None)
instance_weights = inputs.get("instance_weight", None)
del inputs["group"]
if group_distributions is not None:
del inputs["group_distribution"]
if instance_weights is not None:
del inputs["instance_weight"]
loss, _ = self.compute_loss(model, inputs, return_outputs=True)
if train_losses is None:
train_losses = loss.detach().cpu().numpy()
else:
train_losses = np.append(train_losses, loss.detach().cpu().numpy(), axis=0)
# Process losses to compute beta cover weights
instance_weights = self.train_loss_computer.compute_beta_cover(self.args.seed, epoch, self.train_dataset, train_losses)
# Update "instance_weights of self.train_dataset in dataloader (in the middle of training)
# TODO: Check if the dataloader which is consistent, is actually using the updated weights.
self.train_dataset = self.train_dataset.remove_columns("instance_weight")
self.train_dataset = self.train_dataset.add_column("instance_weight", instance_weights)
def _get_train_sampler(self) -> Optional[torch.utils.data.Sampler]:
if not has_length(self.train_dataset):
return None
generator = None
if self.args.world_size <= 1 and _is_torch_generator_available:
generator = torch.Generator()
# for backwards compatibility, we generate a seed here (which is sampled from a generator seeded with
# `args.seed`) if data_seed isn't provided.
# Further on in this method, we default to `args.seed` instead.
if self.args.data_seed is None:
seed = int(torch.empty((), dtype=torch.int64).random_().item())
else:
seed = self.args.data_seed
generator.manual_seed(seed)
seed = self.args.data_seed if self.args.data_seed is not None else self.args.seed
# Build the sampler.
if self.args.group_by_length:
if is_datasets_available() and isinstance(self.train_dataset, datasets.Dataset):
lengths = (
self.train_dataset[self.args.length_column_name]
if self.args.length_column_name in self.train_dataset.column_names
else None
)
else:
lengths = None
model_input_name = self.tokenizer.model_input_names[0] if self.tokenizer is not None else None
if self.args.world_size <= 1:
return LengthGroupedSampler(
self.args.train_batch_size * self.args.gradient_accumulation_steps,
dataset=self.train_dataset,
lengths=lengths,
model_input_name=model_input_name,
generator=generator,
)
else:
return DistributedLengthGroupedSampler(
self.args.train_batch_size * self.args.gradient_accumulation_steps,
dataset=self.train_dataset,
num_replicas=self.args.world_size,
rank=self.args.process_index,
lengths=lengths,
model_input_name=model_input_name,
seed=seed,
)
else:
if self.args.world_size <= 1:
if _is_torch_generator_available:
if self.dro_args.reweight_groups:
# group_array = []
if self.dro_args.use_group_weights:
group_distributions = np.asarray([ex["group_distribution"] for ex in self.train_dataset])
group_array = np.argmax(group_distributions, axis=1)
else:
group_array = [ex["group"] for ex in self.train_dataset]
group_weights = len(self.train_dataset)/self._prepare_input(self.dro_args.group_counts)
weights = group_weights[group_array]
return WeightedRandomSampler(weights, len(self.train_dataset), replacement=True)
else:
return RandomSampler(self.train_dataset, generator=generator)
return RandomSampler(self.train_dataset)
elif (
self.args.parallel_mode in [ParallelMode.TPU, ParallelMode.SAGEMAKER_MODEL_PARALLEL]
and not self.args.dataloader_drop_last
):
# Use a loop for TPUs when drop_last is False to have all batches have the same size.
return DistributedSamplerWithLoop(
self.train_dataset,
batch_size=self.args.per_device_train_batch_size,
num_replicas=self.args.world_size,
rank=self.args.process_index,
seed=seed,
)
else:
return DistributedSampler(
self.train_dataset,
num_replicas=self.args.world_size,
rank=self.args.process_index,
seed=seed,
)
def get_train_dataloader(self) -> DataLoader:
"""
Returns the training [`~torch.utils.data.DataLoader`].
Will use no sampler if `self.train_dataset` does not implement `__len__`, a random sampler (adapted to
distributed training if necessary) otherwise.
Subclass and override this method if you want to inject some custom behavior.
"""
if self.train_dataset is None:
raise ValueError("Trainer: training requires a train_dataset.")
train_dataset = self.train_dataset
if is_datasets_available() and isinstance(train_dataset, datasets.Dataset):
train_dataset = self._remove_unused_columns(train_dataset, description="training")
if isinstance(train_dataset, torch.utils.data.IterableDataset):
if self.args.world_size > 1:
train_dataset = IterableDatasetShard(
train_dataset,
batch_size=self.args.train_batch_size,
drop_last=self.args.dataloader_drop_last,
num_processes=self.args.world_size,
process_index=self.args.process_index,
)
return DataLoader(
train_dataset,
batch_size=self.args.per_device_train_batch_size,
collate_fn=self.data_collator,
num_workers=self.args.dataloader_num_workers,
pin_memory=self.args.dataloader_pin_memory,
)
train_sampler = self._get_train_sampler()
return DataLoader(
train_dataset,
batch_size=self.args.train_batch_size,
sampler=train_sampler,
collate_fn=self.data_collator,
drop_last=self.args.dataloader_drop_last,
num_workers=self.args.dataloader_num_workers,
pin_memory=self.args.dataloader_pin_memory,
)
def _get_eval_sampler(self, eval_dataset: Dataset) -> Optional[torch.utils.data.Sampler]:
# Deprecated code
if self.args.use_legacy_prediction_loop:
if is_torch_tpu_available():
return SequentialDistributedSampler(
eval_dataset, num_replicas=xm.xrt_world_size(), rank=xm.get_ordinal()
)
elif is_sagemaker_mp_enabled():
return SequentialDistributedSampler(
eval_dataset,
num_replicas=smp.dp_size(),
rank=smp.dp_rank(),
batch_size=self.args.per_device_eval_batch_size,
)
elif self.args.local_rank != -1:
return SequentialDistributedSampler(eval_dataset)
else:
return SequentialSampler(eval_dataset)
if self.args.world_size <= 1:
return SequentialSampler(eval_dataset)
else:
return ShardSampler(
eval_dataset,
batch_size=self.args.per_device_eval_batch_size,
num_processes=self.args.world_size,
process_index=self.args.process_index,
)
def get_eval_dataloader(self, eval_dataset: Optional[Dataset] = None) -> DataLoader:
"""
Returns the evaluation [`~torch.utils.data.DataLoader`].
Subclass and override this method if you want to inject some custom behavior.
Args:
eval_dataset (`torch.utils.data.Dataset`, *optional*):
If provided, will override `self.eval_dataset`. If it is an `datasets.Dataset`, columns not accepted by
the `model.forward()` method are automatically removed. It must implement `__len__`.
"""
if eval_dataset is None and self.eval_dataset is None:
raise ValueError("Trainer: evaluation requires an eval_dataset.")
eval_dataset = eval_dataset if eval_dataset is not None else self.eval_dataset
if is_datasets_available() and isinstance(eval_dataset, datasets.Dataset):
eval_dataset = self._remove_unused_columns(eval_dataset, description="evaluation")
if isinstance(eval_dataset, torch.utils.data.IterableDataset):
if self.args.world_size > 1:
eval_dataset = IterableDatasetShard(
eval_dataset,
batch_size=self.args.per_device_eval_batch_size,
drop_last=self.args.dataloader_drop_last,
num_processes=self.args.world_size,
process_index=self.args.process_index,
)
return DataLoader(
eval_dataset,
batch_size=self.args.eval_batch_size,
collate_fn=self.data_collator,
num_workers=self.args.dataloader_num_workers,
pin_memory=self.args.dataloader_pin_memory,
)
eval_sampler = self._get_eval_sampler(eval_dataset)
return DataLoader(
eval_dataset,
sampler=eval_sampler,
batch_size=self.args.eval_batch_size,
collate_fn=self.data_collator,
drop_last=self.args.dataloader_drop_last,
num_workers=self.args.dataloader_num_workers,
pin_memory=self.args.dataloader_pin_memory,
)
def get_test_dataloader(self, test_dataset: Dataset) -> DataLoader:
"""
Returns the test [`~torch.utils.data.DataLoader`].
Subclass and override this method if you want to inject some custom behavior.
Args:
test_dataset (`torch.utils.data.Dataset`, *optional*):
The test dataset to use. If it is an `datasets.Dataset`, columns not accepted by the `model.forward()`
method are automatically removed. It must implement `__len__`.
"""
if is_datasets_available() and isinstance(test_dataset, datasets.Dataset):
test_dataset = self._remove_unused_columns(test_dataset, description="test")
if isinstance(test_dataset, torch.utils.data.IterableDataset):
if self.args.world_size > 1:
test_dataset = IterableDatasetShard(
test_dataset,
batch_size=self.args.eval_batch_size,
drop_last=self.args.dataloader_drop_last,
num_processes=self.args.world_size,
process_index=self.args.process_index,
)
return DataLoader(
test_dataset,
batch_size=self.args.eval_batch_size,
collate_fn=self.data_collator,
num_workers=self.args.dataloader_num_workers,
pin_memory=self.args.dataloader_pin_memory,
)
test_sampler = self._get_eval_sampler(test_dataset)
# We use the same batch_size as for eval.
return DataLoader(
test_dataset,
sampler=test_sampler,
batch_size=self.args.eval_batch_size,
collate_fn=self.data_collator,
drop_last=self.args.dataloader_drop_last,
pin_memory=self.args.dataloader_pin_memory,
)
def create_optimizer_and_scheduler(self, num_training_steps: int):
"""
Setup the optimizer and the learning rate scheduler.
We provide a reasonable default that works well. If you want to use something else, you can pass a tuple in the
Trainer's init through `optimizers`, or subclass and override this method (or `create_optimizer` and/or
`create_scheduler`) in a subclass.
"""
self.create_optimizer()
self.create_scheduler(num_training_steps=num_training_steps, optimizer=self.optimizer)
def create_optimizer(self):
"""
Setup the optimizer.
We provide a reasonable default that works well. If you want to use something else, you can pass a tuple in the
Trainer's init through `optimizers`, or subclass and override this method in a subclass.
"""
if self.optimizer is None:
decay_parameters = get_parameter_names(self.model, [nn.LayerNorm])
decay_parameters = [name for name in decay_parameters if "bias" not in name]
optimizer_grouped_parameters = [
{
"params": [p for n, p in self.model.named_parameters() if n in decay_parameters],
"weight_decay": self.args.weight_decay,
},
{
"params": [p for n, p in self.model.named_parameters() if n not in decay_parameters],
"weight_decay": 0.0,
},
]
optimizer_cls, optimizer_kwargs = TrainerDroGA.get_optimizer_cls_and_kwargs(self.args)
if self.sharded_ddp == ShardedDDPOption.SIMPLE:
self.optimizer = OSS(
params=optimizer_grouped_parameters,
optim=optimizer_cls,
**optimizer_kwargs,
)
else:
self.optimizer = optimizer_cls(optimizer_grouped_parameters, **optimizer_kwargs)
if is_sagemaker_mp_enabled():
self.optimizer = smp.DistributedOptimizer(self.optimizer)
return self.optimizer
@staticmethod
def get_optimizer_cls_and_kwargs(args: TrainingArguments) -> Tuple[Any, Any]:
"""
Returns the optimizer class and optimizer parameters based on the training arguments.
Args:
args (`transformers.training_args.TrainingArguments`):
The training arguments for the training session.
"""
optimizer_kwargs = {"lr": args.learning_rate}
adam_kwargs = {
"betas": (args.adam_beta1, args.adam_beta2),
"eps": args.adam_epsilon,
}
if args.optim == OptimizerNames.ADAFACTOR:
optimizer_cls = Adafactor
optimizer_kwargs.update({"scale_parameter": False, "relative_step": False})
elif args.optim == OptimizerNames.ADAMW_HF:
from .optimization import AdamW
optimizer_cls = AdamW
optimizer_kwargs.update(adam_kwargs)
elif args.optim == OptimizerNames.ADAMW_TORCH:
from torch.optim import AdamW
optimizer_cls = AdamW
optimizer_kwargs.update(adam_kwargs)
elif args.optim == OptimizerNames.ADAMW_TORCH_XLA:
try:
from torch_xla.amp.syncfree import AdamW
optimizer_cls = AdamW
optimizer_kwargs.update(adam_kwargs)
except ImportError:
raise ValueError("Trainer failed to import syncfree AdamW from torch_xla.")
elif args.optim == OptimizerNames.ADAMW_APEX_FUSED:
try:
from apex.optimizers import FusedAdam
optimizer_cls = FusedAdam
optimizer_kwargs.update(adam_kwargs)
except ImportError:
raise ValueError("Trainer tried to instantiate apex FusedAdam but apex is not installed!")
else:
raise ValueError(f"Trainer cannot instantiate unsupported optimizer: {args.optim}")
return optimizer_cls, optimizer_kwargs
def create_scheduler(self, num_training_steps: int, optimizer: torch.optim.Optimizer = None):
"""
Setup the scheduler. The optimizer of the trainer must have been set up either before this method is called or
passed as an argument.
Args:
num_training_steps (int): The number of training steps to do.
"""
if self.lr_scheduler is None:
self.lr_scheduler = get_scheduler(
self.args.lr_scheduler_type,
optimizer=self.optimizer if optimizer is None else optimizer,
num_warmup_steps=self.args.get_warmup_steps(num_training_steps),
num_training_steps=num_training_steps,
)
return self.lr_scheduler
def num_examples(self, dataloader: DataLoader) -> int:
"""
Helper to get number of samples in a [`~torch.utils.data.DataLoader`] by accessing its dataset.
Will raise an exception if the underlying dataset does not implement method `__len__`
"""
return len(dataloader.dataset)
def _hp_search_setup(self, trial: Union["optuna.Trial", Dict[str, Any]]):
"""HP search setup code"""
self._trial = trial
if self.hp_search_backend is None or trial is None:
return
if self.hp_search_backend == HPSearchBackend.OPTUNA:
params = self.hp_space(trial)
elif self.hp_search_backend == HPSearchBackend.RAY:
params = trial
params.pop("wandb", None)
elif self.hp_search_backend == HPSearchBackend.SIGOPT:
params = {k: int(v) if isinstance(v, str) else v for k, v in trial.assignments.items()}
elif self.hp_search_backend == HPSearchBackend.WANDB:
params = trial
for key, value in params.items():
if not hasattr(self.args, key):
logger.warning(
f"Trying to set {key} in the hyperparameter search but there is no corresponding field in `TrainingArguments`."
)
continue
old_attr = getattr(self.args, key, None)
# Casting value to the proper type
if old_attr is not None:
value = type(old_attr)(value)
setattr(self.args, key, value)
if self.hp_search_backend == HPSearchBackend.OPTUNA:
logger.info("Trial:", trial.params)
if self.hp_search_backend == HPSearchBackend.SIGOPT:
logger.info(f"SigOpt Assignments: {trial.assignments}")
if self.hp_search_backend == HPSearchBackend.WANDB:
logger.info(f"W&B Sweep parameters: {trial}")
if self.args.deepspeed:
# Rebuild the deepspeed config to reflect the updated training parameters
from transformers.deepspeed import HfDeepSpeedConfig
self.args.hf_deepspeed_config = HfDeepSpeedConfig(self.args.deepspeed)
def _report_to_hp_search(
self, trial: Union["optuna.Trial", Dict[str, Any]], epoch: int, metrics: Dict[str, float]
):
if self.hp_search_backend is None or trial is None:
return
self.objective = self.compute_objective(metrics.copy())
if self.hp_search_backend == HPSearchBackend.OPTUNA:
import optuna
trial.report(self.objective, epoch)
if trial.should_prune():
raise optuna.TrialPruned()
elif self.hp_search_backend == HPSearchBackend.RAY:
from ray import tune
if self.control.should_save:
self._tune_save_checkpoint()
tune.report(objective=self.objective, **metrics)
def _tune_save_checkpoint(self):
from ray import tune
if not self.use_tune_checkpoints:
return
with tune.checkpoint_dir(step=self.state.global_step) as checkpoint_dir:
output_dir = os.path.join(checkpoint_dir, f"{PREFIX_CHECKPOINT_DIR}-{self.state.global_step}")
self.save_model(output_dir, _internal_call=True)
if self.args.should_save:
self.state.save_to_json(os.path.join(output_dir, TRAINER_STATE_NAME))
torch.save(self.optimizer.state_dict(), os.path.join(output_dir, OPTIMIZER_NAME))
torch.save(self.lr_scheduler.state_dict(), os.path.join(output_dir, SCHEDULER_NAME))
def call_model_init(self, trial=None):
model_init_argcount = number_of_arguments(self.model_init)
if model_init_argcount == 0:
model = self.model_init()
elif model_init_argcount == 1:
model = self.model_init(trial)
else:
raise RuntimeError("model_init should have 0 or 1 argument.")
if model is None:
raise RuntimeError("model_init should not return None.")
return model
def _wrap_model(self, model, training=True):
if is_sagemaker_mp_enabled():
# Wrapping the base model twice in a DistributedModel will raise an error.
if isinstance(self.model_wrapped, smp.model.DistributedModel):
return self.model_wrapped
return smp.DistributedModel(model, backward_passes_per_step=self.args.gradient_accumulation_steps)
# already initialized its own DDP and AMP
if self.deepspeed:
return self.deepspeed
# train/eval could be run multiple-times - if already wrapped, don't re-wrap it again
if unwrap_model(model) is not model:
return model
# Mixed precision training with apex (torch < 1.6)
if self.use_apex and training:
model, self.optimizer = amp.initialize(model, self.optimizer, opt_level=self.args.fp16_opt_level)
# Multi-gpu training (should be after apex fp16 initialization)
if self.args.n_gpu > 1:
model = nn.DataParallel(model)
# Note: in torch.distributed mode, there's no point in wrapping the model
# inside a DistributedDataParallel as we'll be under `no_grad` anyways.
if not training:
return model
# Distributed training (should be after apex fp16 initialization)
if self.sharded_ddp is not None:
# Sharded DDP!
if self.sharded_ddp == ShardedDDPOption.SIMPLE:
model = ShardedDDP(model, self.optimizer)
else:
mixed_precision = self.args.fp16 or self.args.bf16
cpu_offload = ShardedDDPOption.OFFLOAD in self.args.sharded_ddp
zero_3 = self.sharded_ddp == ShardedDDPOption.ZERO_DP_3
# XXX: Breaking the self.model convention but I see no way around it for now.
if ShardedDDPOption.AUTO_WRAP in self.args.sharded_ddp:
model = auto_wrap(model)
self.model = model = FullyShardedDDP(
model,
mixed_precision=mixed_precision,
reshard_after_forward=zero_3,
cpu_offload=cpu_offload,
).to(self.args.device)
elif is_sagemaker_dp_enabled():
model = DDP(model, device_ids=[dist.get_local_rank()], broadcast_buffers=False)
elif self.args.local_rank != -1:
kwargs = {}
if self.args.ddp_find_unused_parameters is not None:
kwargs["find_unused_parameters"] = self.args.ddp_find_unused_parameters
elif isinstance(model, PreTrainedModel):
# find_unused_parameters breaks checkpointing as per
# https://github.com/huggingface/transformers/pull/4659#issuecomment-643356021
kwargs["find_unused_parameters"] = not model.is_gradient_checkpointing
else:
kwargs["find_unused_parameters"] = True
if self.args.ddp_bucket_cap_mb is not None:
kwargs["bucket_cap_mb"] = self.args.ddp_bucket_cap_mb
model = nn.parallel.DistributedDataParallel(
model,
device_ids=[self.args.local_rank] if self.args._n_gpu != 0 else None,
output_device=self.args.local_rank if self.args._n_gpu != 0 else None,
**kwargs,
)
return model
def log_training_dynamics(self, output_dir: os.path,
epoch: int,
train_ids: List[int],
train_logits: List[List[float]],
train_golds: List[int]):
"""
Save training dynamics (logits) from given epoch as records of a `.jsonl` file.
"""
td_df = pd.DataFrame({"guid": train_ids,
f"logits_epoch_{epoch}": train_logits,
"gold": train_golds})
logging_dir = os.path.join(output_dir, f"training_dynamics")
# Create directory for logging training dynamics, if it doesn't already exist.
if not os.path.exists(logging_dir):
os.makedirs(logging_dir)
epoch_file_name = os.path.join(logging_dir, f"dynamics_epoch_{epoch}.jsonl")
td_df.to_json(epoch_file_name, lines=True, orient="records")
logger.info(f"Training Dynamics logged to {epoch_file_name}")
def log_dro_dynamics(self, output_dir: os.path,
epochs: List[int],
iterations: List[int],
group_probs: List[List[float]],
group_losses: List[List[float]],
):
td_df = pd.DataFrame({"epoch": epochs,
f"iteration": iterations,
"group_weight": group_probs,
"group_loss": group_losses})
logging_dir = os.path.join(output_dir, f"dro_dynamics")
# Create directory for logging training dynamics, if it doesn't already exist.
if not os.path.exists(logging_dir):
os.makedirs(logging_dir)
epoch_file_name = os.path.join(logging_dir, f"dro_dynamics.jsonl")
td_df.to_json(epoch_file_name, lines=True, orient="records")
logger.info(f"Training Dynamics logged to {epoch_file_name}")
def train(
self,
resume_from_checkpoint: Optional[Union[str, bool]] = None,
trial: Union["optuna.Trial", Dict[str, Any]] = None,
ignore_keys_for_eval: Optional[List[str]] = None,
**kwargs,
):
"""
Main training entry point.
Args:
resume_from_checkpoint (`str` or `bool`, *optional*):
If a `str`, local path to a saved checkpoint as saved by a previous instance of [`Trainer`]. If a
`bool` and equals `True`, load the last checkpoint in *args.output_dir* as saved by a previous instance
of [`Trainer`]. If present, training will resume from the model/optimizer/scheduler states loaded here.
trial (`optuna.Trial` or `Dict[str, Any]`, *optional*):
The trial run or the hyperparameter dictionary for hyperparameter search.
ignore_keys_for_eval (`List[str]`, *optional*)
A list of keys in the output of your model (if it is a dictionary) that should be ignored when
gathering predictions for evaluation during the training.
kwargs:
Additional keyword arguments used to hide deprecated arguments
"""
resume_from_checkpoint = None if not resume_from_checkpoint else resume_from_checkpoint
# memory metrics - must set up as early as possible
self._memory_tracker.start()
args = self.args
self.is_in_train = True
# do_train is not a reliable argument, as it might not be set and .train() still called, so
# the following is a workaround:
if (args.fp16_full_eval or args.bf16_full_eval) and not args.do_train:
self._move_model_to_device(self.model, args.device)
if "model_path" in kwargs:
resume_from_checkpoint = kwargs.pop("model_path")
warnings.warn(
"`model_path` is deprecated and will be removed in a future version. Use `resume_from_checkpoint` "
"instead.",
FutureWarning,
)
if len(kwargs) > 0:
raise TypeError(f"train() received got unexpected keyword arguments: {', '.join(list(kwargs.keys()))}.")
# This might change the seed so needs to run first.
self._hp_search_setup(trial)
# Model re-init
model_reloaded = False
if self.model_init is not None:
# Seed must be set before instantiating the model when using model_init.
set_seed(args.seed)
self.model = self.call_model_init(trial)
model_reloaded = True
# Reinitializes optimizer and scheduler
self.optimizer, self.lr_scheduler = None, None
# Load potential model checkpoint
if isinstance(resume_from_checkpoint, bool) and resume_from_checkpoint:
resume_from_checkpoint = get_last_checkpoint(args.output_dir)
if resume_from_checkpoint is None:
raise ValueError(f"No valid checkpoint found in output directory ({args.output_dir})")
if resume_from_checkpoint is not None:
if not os.path.isfile(os.path.join(resume_from_checkpoint, WEIGHTS_NAME)):
raise ValueError(f"Can't find a valid checkpoint at {resume_from_checkpoint}")
logger.info(f"Loading model from {resume_from_checkpoint}).")
if os.path.isfile(os.path.join(resume_from_checkpoint, CONFIG_NAME)):
config = PretrainedConfig.from_json_file(os.path.join(resume_from_checkpoint, CONFIG_NAME))
checkpoint_version = config.transformers_version
if checkpoint_version is not None and checkpoint_version != __version__:
logger.warning(
f"You are resuming training from a checkpoint trained with {checkpoint_version} of "
f"Transformers but your current version is {__version__}. This is not recommended and could "
"yield to errors or unwanted behaviors."
)
if args.deepspeed:
# will be resumed in deepspeed_init
pass
else:
# We load the model state dict on the CPU to avoid an OOM error.
state_dict = torch.load(os.path.join(resume_from_checkpoint, WEIGHTS_NAME), map_location="cpu")
# If the model is on the GPU, it still works!
self._load_state_dict_in_model(state_dict)
# release memory
del state_dict
# If model was re-initialized, put it on the right device and update self.model_wrapped
if model_reloaded:
if self.place_model_on_device:
self._move_model_to_device(self.model, args.device)
self.model_wrapped = self.model
# Keeping track whether we can can len() on the dataset or not
train_dataset_is_sized = has_length(self.train_dataset)
# Data loader and number of training steps
train_dataloader = self.get_train_dataloader()
# Setting up training control variables:
# number of training epochs: num_train_epochs
# number of training steps per epoch: num_update_steps_per_epoch
# total number of training steps to execute: max_steps
total_train_batch_size = args.train_batch_size * args.gradient_accumulation_steps * args.world_size
if train_dataset_is_sized:
num_update_steps_per_epoch = len(train_dataloader) // args.gradient_accumulation_steps
num_update_steps_per_epoch = max(num_update_steps_per_epoch, 1)
if args.max_steps > 0:
max_steps = args.max_steps
num_train_epochs = args.max_steps // num_update_steps_per_epoch + int(
args.max_steps % num_update_steps_per_epoch > 0
)
# May be slightly incorrect if the last batch in the training datalaoder has a smaller size but it's
# the best we can do.
num_train_samples = args.max_steps * total_train_batch_size
else:
max_steps = math.ceil(args.num_train_epochs * num_update_steps_per_epoch)
num_train_epochs = math.ceil(args.num_train_epochs)
num_train_samples = len(self.train_dataset) * args.num_train_epochs
else:
# see __init__. max_steps is set when the dataset has no __len__
max_steps = args.max_steps
# Setting a very large number of epochs so we go as many times as necessary over the iterator.
num_train_epochs = sys.maxsize
num_update_steps_per_epoch = max_steps
num_train_samples = args.max_steps * total_train_batch_size
if DebugOption.UNDERFLOW_OVERFLOW in self.args.debug:
if self.args.n_gpu > 1:
# nn.DataParallel(model) replicates the model, creating new variables and module
# references registered here no longer work on other gpus, breaking the module
raise ValueError(
"Currently --debug underflow_overflow is not supported under DP. Please use DDP (torch.distributed.launch)."
)
else:
debug_overflow = DebugUnderflowOverflow(self.model) # noqa
delay_optimizer_creation = (
self.sharded_ddp is not None and self.sharded_ddp != ShardedDDPOption.SIMPLE or is_sagemaker_mp_enabled()
)
if args.deepspeed:
deepspeed_engine, optimizer, lr_scheduler = deepspeed_init(
self, num_training_steps=max_steps, resume_from_checkpoint=resume_from_checkpoint
)
self.model = deepspeed_engine.module
self.model_wrapped = deepspeed_engine
self.deepspeed = deepspeed_engine
self.optimizer = optimizer
self.lr_scheduler = lr_scheduler
elif not delay_optimizer_creation:
self.create_optimizer_and_scheduler(num_training_steps=max_steps)
self.state = TrainerState()
self.state.is_hyper_param_search = trial is not None
# Activate gradient checkpointing if needed
if args.gradient_checkpointing:
self.model.gradient_checkpointing_enable()
model = self._wrap_model(self.model_wrapped)
# for the rest of this function `model` is the outside model, whether it was wrapped or not
if model is not self.model:
self.model_wrapped = model
if delay_optimizer_creation:
self.create_optimizer_and_scheduler(num_training_steps=max_steps)
# Check if saved optimizer or scheduler states exist
self._load_optimizer_and_scheduler(resume_from_checkpoint)
# important: at this point:
# self.model is the Transformers Model
# self.model_wrapped is DDP(Transformers Model), Deepspeed(Transformers Model), etc.
# Train!
num_examples = (
self.num_examples(train_dataloader) if train_dataset_is_sized else total_train_batch_size * args.max_steps
)
logger.info("***** Running training *****")
logger.info(f" Num examples = {num_examples}")
logger.info(f" Num Epochs = {num_train_epochs}")
logger.info(f" Instantaneous batch size per device = {args.per_device_train_batch_size}")
logger.info(f" Total train batch size (w. parallel, distributed & accumulation) = {total_train_batch_size}")
logger.info(f" Gradient Accumulation steps = {args.gradient_accumulation_steps}")
logger.info(f" Total optimization steps = {max_steps}")
self.state.epoch = 0
start_time = time.time()
epochs_trained = 0
steps_trained_in_current_epoch = 0
steps_trained_progress_bar = None
# Check if continuing training from a checkpoint
if resume_from_checkpoint is not None and os.path.isfile(
os.path.join(resume_from_checkpoint, TRAINER_STATE_NAME)
):
self.state = TrainerState.load_from_json(os.path.join(resume_from_checkpoint, TRAINER_STATE_NAME))
epochs_trained = self.state.global_step // num_update_steps_per_epoch
if not args.ignore_data_skip:
steps_trained_in_current_epoch = self.state.global_step % (num_update_steps_per_epoch)
steps_trained_in_current_epoch *= args.gradient_accumulation_steps
else:
steps_trained_in_current_epoch = 0
logger.info(" Continuing training from checkpoint, will skip to saved global_step")
logger.info(f" Continuing training from epoch {epochs_trained}")
logger.info(f" Continuing training from global step {self.state.global_step}")
if not args.ignore_data_skip:
logger.info(
f" Will skip the first {epochs_trained} epochs then the first {steps_trained_in_current_epoch} "
"batches in the first epoch. If this takes a lot of time, you can add the `--ignore_data_skip` "
"flag to your launch command, but you will resume the training on data already seen by your model."
)
if self.is_local_process_zero() and not args.disable_tqdm:
steps_trained_progress_bar = tqdm(total=steps_trained_in_current_epoch)
steps_trained_progress_bar.set_description("Skipping the first batches")
# Update the references
self.callback_handler.model = self.model
self.callback_handler.optimizer = self.optimizer
self.callback_handler.lr_scheduler = self.lr_scheduler
self.callback_handler.train_dataloader = train_dataloader
self.state.trial_name = self.hp_name(trial) if self.hp_name is not None else None
if trial is not None:
assignments = trial.assignments if self.hp_search_backend == HPSearchBackend.SIGOPT else trial
self.state.trial_params = hp_params(assignments)
else:
self.state.trial_params = None
# This should be the same if the state has been saved but in case the training arguments changed, it's safer
# to set this after the load.
self.state.max_steps = max_steps
self.state.num_train_epochs = num_train_epochs
self.state.is_local_process_zero = self.is_local_process_zero()
self.state.is_world_process_zero = self.is_world_process_zero()
# tr_loss is a tensor to avoid synchronization of TPUs through .item()
tr_loss = torch.tensor(0.0).to(args.device)
# _total_loss_scalar is updated everytime .item() has to be called on tr_loss and stores the sum of all losses
self._total_loss_scalar = 0.0
self._globalstep_last_logged = self.state.global_step
model.zero_grad()
self.control = self.callback_handler.on_train_begin(args, self.state, self.control)
# Skip the first epochs_trained epochs to get the random state of the dataloader at the right point.
if not args.ignore_data_skip:
for epoch in range(epochs_trained):
# We just need to begin an iteration to create the randomization of the sampler.
for _ in train_dataloader:
break
# Create dro dynamics variable.
epoch_list = []
iteration_list = []
group_assignment_list = []
group_loss_list = []
# Book-keeping for model selection
worst_valid_acc = None
bad_counts = 0
resplit_train_epoch = 0
for epoch in range(epochs_trained, num_train_epochs):
if isinstance(train_dataloader, DataLoader) and isinstance(train_dataloader.sampler, DistributedSampler):
train_dataloader.sampler.set_epoch(epoch)
elif isinstance(train_dataloader.dataset, IterableDatasetShard):
train_dataloader.dataset.set_epoch(epoch)
if is_torch_tpu_available():
parallel_loader = pl.ParallelLoader(train_dataloader, [args.device]).per_device_loader(args.device)
epoch_iterator = parallel_loader
else:
epoch_iterator = train_dataloader
# Reset the past mems state at the beginning of each epoch if necessary.
if args.past_index >= 0:
self._past = None
steps_in_epoch = (
len(epoch_iterator) if train_dataset_is_sized else args.max_steps * args.gradient_accumulation_steps
)
self.control = self.callback_handler.on_epoch_begin(args, self.state, self.control)
step = -1
# Create training dynamics information.
train_ids = None
train_golds = None
train_logits = None
train_losses = None
# Change logic slightly, so that you collect as many batches as there are gradient accumulation steps
# compute a quick count over groups and pass it as an input vector before running the forward pass itself.
# One danger is that you'll still run out of gpu space.
mega_batches = []
accumulated_group_loss = self._prepare_input(torch.zeros(self.train_loss_computer.n_groups).float())
for step, inputs in enumerate(epoch_iterator):
if step % args.gradient_accumulation_steps == 0:
self.control = self.callback_handler.on_step_begin(args, self.state, self.control)
if (step + 1) % args.gradient_accumulation_steps == 0 or (
# last step in epoch but step is always smaller than gradient_accumulation_steps
steps_in_epoch <= args.gradient_accumulation_steps
and (step + 1) == steps_in_epoch
):
mega_batches.append(inputs)
# TODO: Process group counts and add to each minibatch in mega_batches
for substep, inputs in enumerate(mega_batches):
train_ids_batch = inputs["guid"]
train_groups_batch = inputs["group"]
# Compute group counts and add additional field to inputs
group_map = (train_groups_batch == torch.arange(self.train_loss_computer.n_groups).unsqueeze(1))
inputs["group_counts"] = group_map.sum(1)
if substep == len(mega_batches) - 1:
# for last batch, follow process used with gradient accumulation
inputs["update_avg"] = True
inputs["batch_group_loss"] = accumulated_group_loss
tr_loss_step, group_loss, batch_logits = self.training_step(model, inputs)
# Gradient clipping
if args.max_grad_norm is not None and args.max_grad_norm > 0 and not self.deepspeed:
# deepspeed does its own clipping
if self.do_grad_scaling:
# Reduce gradients first for XLA
if is_torch_tpu_available():
gradients = xm._fetch_gradients(self.optimizer)
xm.all_reduce("sum", gradients, scale=1.0 / xm.xrt_world_size())
# AMP: gradients need unscaling
self.scaler.unscale_(self.optimizer)
if hasattr(self.optimizer, "clip_grad_norm"):
# Some optimizers (like the sharded optimizer) have a specific way to do gradient clipping
self.optimizer.clip_grad_norm(args.max_grad_norm)
elif hasattr(model, "clip_grad_norm_"):
# Some models (like FullyShardedDDP) have a specific way to do gradient clipping
model.clip_grad_norm_(args.max_grad_norm)
else:
# Revert to normal clipping otherwise, handling Apex or full precision
nn.utils.clip_grad_norm_(
amp.master_params(self.optimizer) if self.use_apex else model.parameters(),
args.max_grad_norm,
)
# Optimizer step
optimizer_was_run = True
if self.deepspeed:
pass # called outside the loop
elif is_torch_tpu_available():
if self.do_grad_scaling:
self.scaler.step(self.optimizer)
self.scaler.update()
else:
xm.optimizer_step(self.optimizer)
elif self.do_grad_scaling:
scale_before = self.scaler.get_scale()
self.scaler.step(self.optimizer)
self.scaler.update()
scale_after = self.scaler.get_scale()
optimizer_was_run = scale_before <= scale_after
else:
self.optimizer.step()
if optimizer_was_run and not self.deepspeed:
self.lr_scheduler.step()
model.zero_grad()
self.state.global_step += 1
self.state.epoch = epoch + (step + 1) / steps_in_epoch
self.control = self.callback_handler.on_step_end(args, self.state, self.control)
_ = self._maybe_log_save_evaluate(tr_loss, model, trial, epoch, ignore_keys_for_eval, evaluate=False)
if self.dro_args.is_robust and self.state.global_step % self.args.logging_steps == 0:
self.train_loss_computer.log_stats(logger, True)
self.log(self.train_loss_computer.get_stats(model, args))
iteration_list.append(step)
epoch_list.append(epoch)
group_assignment_list.append(list(self.train_loss_computer.adv_probs.cpu().numpy()))
group_loss_list.append(list(self.train_loss_computer.group_loss.detach().cpu().numpy()))
else:
# For all batches except last one, follow process used without gradient accumulation
# if args.local_rank != -1 and args._no_sync_in_gradient_accumulation:
# with model.no_sync():
tr_loss_step, group_loss, batch_logits = self.training_step(model, inputs)
accumulated_group_loss += group_loss
self.control = self.callback_handler.on_substep_end(args, self.state, self.control)
if train_logits is None: # Keep track of training dynamics.
train_ids = train_ids_batch
train_logits = batch_logits[0].detach().cpu().numpy()
train_golds = inputs["labels"].detach().cpu().numpy()
# TODO: Check dimension of loss, also does it make sense to detach before optimization.
train_losses = tr_loss_step.cpu().numpy()
else:
train_ids = np.append(train_ids, train_ids_batch)
train_logits = np.append(train_logits, batch_logits[0].detach().cpu().numpy(), axis=0)
train_golds = np.append(train_golds, inputs["labels"].detach().cpu().numpy())
train_losses = np.append(train_losses, tr_loss_step.cpu().numpy())
if self.control.should_epoch_stop or self.control.should_training_stop:
break
if (
args.logging_nan_inf_filter
and not is_torch_tpu_available()
and (torch.isnan(tr_loss_step) or torch.isinf(tr_loss_step))
):
# if loss is nan or inf simply add the average of previous logged losses
tr_loss += tr_loss / (1 + self.state.global_step - self._globalstep_last_logged)
else:
tr_loss += tr_loss_step
self.current_flos += float(self.floating_point_ops(inputs))
mega_batches = []
accumulated_group_loss = self._prepare_input(torch.zeros(self.train_loss_computer.n_groups).float())
else:
mega_batches.append(inputs)
continue
# End of epoch, reset train loss computer.
if self.dro_args.is_robust and self.train_loss_computer.batch_count > 0:
self.train_loss_computer.log_stats(logger, True)
self.log(self.train_loss_computer.get_stats(model, args))
self.train_loss_computer.reset_stats()
if self.dro_args.robust_algorithm == "GCDRO":
self._update_columns(epoch=epoch) #, dataloader=epoch_iterator)
# update epoch iterator, since instance weights are being changed in self.train_dataset
train_dataloader = self.get_train_dataloader()
if is_torch_tpu_available():
parallel_loader = pl.ParallelLoader(train_dataloader, [args.device]).per_device_loader(args.device)
epoch_iterator = parallel_loader
else:
epoch_iterator = train_dataloader
if step < 0:
logger.warning(
f"There seems to be not a single sample in your epoch_iterator, stopping training at step"
f" {self.state.global_step}! This is expected if you're using an IterableDataset and set"
f" num_steps ({max_steps}) higher than the number of available samples."
)
self.control.should_training_stop = True
# Log training dynamics.
self.log_training_dynamics(output_dir=args.output_dir,
epoch=epoch,
train_ids=list(train_ids),
train_logits=list(train_logits),
train_golds=list(train_golds))
self.control = self.callback_handler.on_epoch_end(args, self.state, self.control)
metrics = self._maybe_log_save_evaluate(tr_loss, model, trial, epoch, ignore_keys_for_eval, evaluate=True)
# Training stopping criterion
become_better = False
if self.dro_args.is_robust:
resplit_train_epoch += 1
valid_group_acc = [(int(key.lstrip("eval_group_accuracy_")), metrics[key]) for key in metrics.keys() if key.startswith("eval_group_accuracy")]
curr_worst_valid_acc = min([acc for _, acc in valid_group_acc])
sorted_by_group_id = sorted(valid_group_acc, key=lambda tup: tup[0])
group_acc = " ".join(["%d: %.3f" % (idx, acc if acc > 0 else -acc) for idx, acc in sorted_by_group_id])
become_better = (worst_valid_acc is not None and curr_worst_valid_acc > worst_valid_acc) or worst_valid_acc is None
worst_valid_acc = curr_worst_valid_acc if worst_valid_acc is None else max(curr_worst_valid_acc, worst_valid_acc)
bad_counts = 0 if become_better else bad_counts + 1
logger.info("Valid group performance: {}".format(group_acc))
logger.info("Better worst valid = {}, bad counts = {}, worst acc = {}".format(become_better, bad_counts, curr_worst_valid_acc))
# Update metrics (best_worst_group)
metrics["eval_worst_accuracy"] = worst_valid_acc
# Inner update criterion for GCDRO (every epoch or when worst accuracy drops (conservative), Chunting is using every epoch) : SKIP
# Early stopping criterion : Worst group has no changed for patience number of validations. Chunting uses default patience of -1, so no early stopping: SKIP
# Model selection (save checkpoint with best worst_accuracy as the "best_" checkpoint)
if become_better:
# First time worst_accuracy is computed, or worst accuracy improved.
self._save_checkpoint(model, trial, metrics=metrics, save_best=True)
if DebugOption.TPU_METRICS_DEBUG in self.args.debug:
if is_torch_tpu_available():
# tpu-comment: Logging debug metrics for PyTorch/XLA (compile, execute times, ops, etc.)
xm.master_print(met.metrics_report())
else:
logger.warning(
"You enabled PyTorch/XLA debug metrics but you don't have a TPU "
"configured. Check your training configuration if this is unexpected."
)
if self.control.should_training_stop:
break
# End of training
# Dump dro group assignments to file.
self.log_dro_dynamics(output_dir=args.output_dir, epochs=epoch_list, iterations=iteration_list, group_probs=group_assignment_list, group_losses=group_loss_list)
if args.past_index and hasattr(self, "_past"):
# Clean the state at the end of training
delattr(self, "_past")
logger.info("\n\nTraining completed. Do not forget to share your model on huggingface.co/models =)\n\n")
if args.load_best_model_at_end and self.state.best_model_checkpoint is not None:
# Wait for everyone to get here so we are sur the model has been saved by process 0.
if is_torch_tpu_available():
xm.rendezvous("load_best_model_at_end")
elif args.local_rank != -1:
dist.barrier()
logger.info(
f"Loading best model from {self.state.best_model_checkpoint} (score: {self.state.best_metric})."
)
best_model_path = os.path.join(self.state.best_model_checkpoint, WEIGHTS_NAME)
if os.path.exists(best_model_path):
if self.deepspeed:
# temp hack until Deepspeed fixes the problem with resume from an existing engine that did some stepping
deepspeed_engine, optimizer, lr_scheduler = deepspeed_reinit(self)
self.model = deepspeed_engine.module
self.model_wrapped = deepspeed_engine
self.deepspeed = deepspeed_engine
self.optimizer = optimizer
self.lr_scheduler = lr_scheduler
self.deepspeed.load_checkpoint(
self.state.best_model_checkpoint, load_optimizer_states=True, load_lr_scheduler_states=True
)
else:
# We load the model state dict on the CPU to avoid an OOM error.
state_dict = torch.load(best_model_path, map_location="cpu")
# If the model is on the GPU, it still works!
self._load_state_dict_in_model(state_dict)
else:
logger.warning(
f"Could not locate the best model at {best_model_path}, if you are running a distributed training "
"on multiple nodes, you should activate `--save_on_each_node`."
)
# add remaining tr_loss
self._total_loss_scalar += tr_loss.item()
train_loss = self._total_loss_scalar / self.state.global_step
metrics = speed_metrics("train", start_time, num_samples=num_train_samples, num_steps=self.state.max_steps)
self.store_flos()
metrics["total_flos"] = self.state.total_flos
metrics["train_loss"] = train_loss
self.is_in_train = False
self._memory_tracker.stop_and_update_metrics(metrics)
self.log(metrics)
self.control = self.callback_handler.on_train_end(args, self.state, self.control)
return TrainOutput(self.state.global_step, train_loss, metrics)
def _load_state_dict_in_model(self, state_dict):
load_result = self.model.load_state_dict(state_dict, strict=False)
if len(load_result.missing_keys) != 0:
if self.model._keys_to_ignore_on_save is not None and set(load_result.missing_keys) == set(
self.model._keys_to_ignore_on_save
):
self.model.tie_weights()
else:
logger.warning(f"There were missing keys in the checkpoint model loaded: {load_result.missing_keys}.")
if len(load_result.unexpected_keys) != 0:
logger.warning(
f"There were unexpected keys in the checkpoint model loaded: {load_result.unexpected_keys}."
)
def _maybe_log_save_evaluate(self, tr_loss, model, trial, epoch, ignore_keys_for_eval, evaluate=False):
if self.control.should_log:
if is_torch_tpu_available():
xm.mark_step()
logs: Dict[str, float] = {}
# all_gather + mean() to get average loss over all processes
tr_loss_scalar = self._nested_gather(tr_loss).mean().item()
# reset tr_loss to zero
tr_loss -= tr_loss
logs["loss"] = round(tr_loss_scalar / (self.state.global_step - self._globalstep_last_logged), 4)
logs["learning_rate"] = self._get_learning_rate()
self._total_loss_scalar += tr_loss_scalar
self._globalstep_last_logged = self.state.global_step
self.store_flos()
self.log(logs)
metrics = None
if evaluate: # and self.control.should_evaluate:
metrics = self.evaluate(ignore_keys=ignore_keys_for_eval)
self._report_to_hp_search(trial, epoch, metrics)
if self.control.should_save:
self._save_checkpoint(model, trial, metrics=metrics)
self.control = self.callback_handler.on_save(self.args, self.state, self.control)
return metrics
def _load_rng_state(self, checkpoint):
# Load RNG states from `checkpoint`
if checkpoint is None:
return
local_rank = xm.get_local_ordinal() if is_torch_tpu_available() else self.args.local_rank
if local_rank != -1:
rng_file = os.path.join(checkpoint, f"rng_state_{local_rank}.pth")
if not os.path.isfile(os.path.join(checkpoint, rng_file)):
logger.info(
f"Didn't find an RNG file for process {local_rank}, if you are resuming a training that "
"wasn't launched in a distributed fashion, reproducibility is not guaranteed."
)
return
else:
rng_file = os.path.join(checkpoint, "rng_state.pth")
if not os.path.isfile(rng_file):
logger.info(
"Didn't find an RNG file, if you are resuming a training that was launched in a distributed "
"fashion, reproducibility is not guaranteed."
)
return
checkpoint_rng_state = torch.load(rng_file)
random.setstate(checkpoint_rng_state["python"])
np.random.set_state(checkpoint_rng_state["numpy"])
torch.random.set_rng_state(checkpoint_rng_state["cpu"])
if torch.cuda.is_available():
if self.args.local_rank != -1:
torch.cuda.random.set_rng_state(checkpoint_rng_state["cuda"])
else:
try:
torch.cuda.random.set_rng_state_all(checkpoint_rng_state["cuda"])
except Exception as e:
logger.info(
f"Didn't manage to set back the RNG states of the GPU because of the following error:\n {e}"
"\nThis won't yield the same results as if the training had not been interrupted."
)
if is_torch_tpu_available():
xm.set_rng_state(checkpoint_rng_state["xla"])
def _save_checkpoint(self, model, trial, metrics=None, save_best=False):
# In all cases, including ddp/dp/deepspeed, self.model is always a reference to the model we
# want to save except FullyShardedDDP.
# assert unwrap_model(model) is self.model, "internal model should be a reference to self.model"
# Save model checkpoint
if save_best:
checkpoint_folder = f"best_checkpoint"
else:
checkpoint_folder = f"{PREFIX_CHECKPOINT_DIR}-{self.state.global_step}"
if self.hp_search_backend is not None and trial is not None:
if self.hp_search_backend == HPSearchBackend.OPTUNA:
run_id = trial.number
elif self.hp_search_backend == HPSearchBackend.RAY:
from ray import tune
run_id = tune.get_trial_id()
elif self.hp_search_backend == HPSearchBackend.SIGOPT:
run_id = trial.id
elif self.hp_search_backend == HPSearchBackend.WANDB:
import wandb
run_id = wandb.run.id
run_name = self.hp_name(trial) if self.hp_name is not None else f"run-{run_id}"
run_dir = os.path.join(self.args.output_dir, run_name)
else:
run_dir = self.args.output_dir
self.store_flos()
output_dir = os.path.join(run_dir, checkpoint_folder)
self.save_model(output_dir, _internal_call=True)
if self.deepspeed:
# under zero3 model file itself doesn't get saved since it's bogus! Unless deepspeed
# config `stage3_gather_fp16_weights_on_model_save` is True
self.deepspeed.save_checkpoint(output_dir)
# Save optimizer and scheduler
if self.sharded_ddp == ShardedDDPOption.SIMPLE:
self.optimizer.consolidate_state_dict()
if is_torch_tpu_available():
xm.rendezvous("saving_optimizer_states")
xm.save(self.optimizer.state_dict(), os.path.join(output_dir, OPTIMIZER_NAME))
with warnings.catch_warnings(record=True) as caught_warnings:
xm.save(self.lr_scheduler.state_dict(), os.path.join(output_dir, SCHEDULER_NAME))
reissue_pt_warnings(caught_warnings)
elif is_sagemaker_mp_enabled():
if smp.rdp_rank() == 0:
# Consolidate the state dict on all processed of rdp_rank 0
opt_state_dict = self.optimizer.state_dict()
# Save it and the scheduler on the main process
if self.args.should_save:
torch.save(opt_state_dict, os.path.join(output_dir, OPTIMIZER_NAME))
with warnings.catch_warnings(record=True) as caught_warnings:
torch.save(self.lr_scheduler.state_dict(), os.path.join(output_dir, SCHEDULER_NAME))
reissue_pt_warnings(caught_warnings)
if self.do_grad_scaling:
torch.save(self.scaler.state_dict(), os.path.join(output_dir, SCALER_NAME))
elif self.args.should_save and not self.deepspeed:
# deepspeed.save_checkpoint above saves model/optim/sched
torch.save(self.optimizer.state_dict(), os.path.join(output_dir, OPTIMIZER_NAME))
with warnings.catch_warnings(record=True) as caught_warnings:
torch.save(self.lr_scheduler.state_dict(), os.path.join(output_dir, SCHEDULER_NAME))
reissue_pt_warnings(caught_warnings)
if self.do_grad_scaling:
torch.save(self.scaler.state_dict(), os.path.join(output_dir, SCALER_NAME))
# Determine the new best metric / best model checkpoint
if metrics is not None and self.args.metric_for_best_model is not None:
metric_to_check = self.args.metric_for_best_model
if not metric_to_check.startswith("eval_"):
metric_to_check = f"eval_{metric_to_check}"
metric_value = metrics[metric_to_check]
operator = np.greater if self.args.greater_is_better else np.less
if (
self.state.best_metric is None
or self.state.best_model_checkpoint is None
or operator(metric_value, self.state.best_metric)
):
self.state.best_metric = metric_value
self.state.best_model_checkpoint = output_dir
# Save the Trainer state
if self.args.should_save:
self.state.save_to_json(os.path.join(output_dir, TRAINER_STATE_NAME))
# Save RNG state in non-distributed training
rng_states = {
"python": random.getstate(),
"numpy": np.random.get_state(),
"cpu": torch.random.get_rng_state(),
}
if torch.cuda.is_available():
if self.args.local_rank == -1:
# In non distributed, we save the global CUDA RNG state (will take care of DataParallel)
rng_states["cuda"] = torch.cuda.random.get_rng_state_all()
else:
rng_states["cuda"] = torch.cuda.random.get_rng_state()
if is_torch_tpu_available():
rng_states["xla"] = xm.get_rng_state()
# A process can arrive here before the process 0 has a chance to save the model, in which case output_dir may
# not yet exist.
os.makedirs(output_dir, exist_ok=True)
local_rank = xm.get_local_ordinal() if is_torch_tpu_available() else self.args.local_rank
if local_rank == -1:
torch.save(rng_states, os.path.join(output_dir, "rng_state.pth"))
else:
torch.save(rng_states, os.path.join(output_dir, f"rng_state_{local_rank}.pth"))
# Maybe delete some older checkpoints.
if self.args.should_save:
self._rotate_checkpoints(use_mtime=True, output_dir=run_dir)
def _load_optimizer_and_scheduler(self, checkpoint):
"""If optimizer and scheduler states exist, load them."""
if checkpoint is None:
return
if self.deepspeed:
# deepspeed loads optimizer/lr_scheduler together with the model in deepspeed_init
return
if os.path.isfile(os.path.join(checkpoint, OPTIMIZER_NAME)) and os.path.isfile(
os.path.join(checkpoint, SCHEDULER_NAME)
):
# Load in optimizer and scheduler states
if is_torch_tpu_available():
# On TPU we have to take some extra precautions to properly load the states on the right device.
optimizer_state = torch.load(os.path.join(checkpoint, OPTIMIZER_NAME), map_location="cpu")
with warnings.catch_warnings(record=True) as caught_warnings:
lr_scheduler_state = torch.load(os.path.join(checkpoint, SCHEDULER_NAME), map_location="cpu")
reissue_pt_warnings(caught_warnings)
xm.send_cpu_data_to_device(optimizer_state, self.args.device)
xm.send_cpu_data_to_device(lr_scheduler_state, self.args.device)
self.optimizer.load_state_dict(optimizer_state)
self.lr_scheduler.load_state_dict(lr_scheduler_state)
else:
map_location = "cpu" if is_sagemaker_mp_enabled() else self.args.device
self.optimizer.load_state_dict(
torch.load(os.path.join(checkpoint, OPTIMIZER_NAME), map_location=map_location)
)
with warnings.catch_warnings(record=True) as caught_warnings:
self.lr_scheduler.load_state_dict(torch.load(os.path.join(checkpoint, SCHEDULER_NAME)))
reissue_pt_warnings(caught_warnings)
if self.do_grad_scaling and os.path.isfile(os.path.join(checkpoint, SCALER_NAME)):
self.scaler.load_state_dict(torch.load(os.path.join(checkpoint, SCALER_NAME)))
def hyperparameter_search(
self,
hp_space: Optional[Callable[["optuna.Trial"], Dict[str, float]]] = None,
compute_objective: Optional[Callable[[Dict[str, float]], float]] = None,
n_trials: int = 20,
direction: str = "minimize",
backend: Optional[Union["str", HPSearchBackend]] = None,
hp_name: Optional[Callable[["optuna.Trial"], str]] = None,
**kwargs,
) -> BestRun:
"""
Launch an hyperparameter search using `optuna` or `Ray Tune` or `SigOpt`. The optimized quantity is determined
by `compute_objective`, which defaults to a function returning the evaluation loss when no metric is provided,
the sum of all metrics otherwise.
<Tip warning={true}>
To use this method, you need to have provided a `model_init` when initializing your [`Trainer`]: we need to
reinitialize the model at each new run. This is incompatible with the `optimizers` argument, so you need to
subclass [`Trainer`] and override the method [`~Trainer.create_optimizer_and_scheduler`] for custom
optimizer/scheduler.
</Tip>
Args:
hp_space (`Callable[["optuna.Trial"], Dict[str, float]]`, *optional*):
A function that defines the hyperparameter search space. Will default to
[`~trainer_utils.default_hp_space_optuna`] or [`~trainer_utils.default_hp_space_ray`] or
[`~trainer_utils.default_hp_space_sigopt`] depending on your backend.
compute_objective (`Callable[[Dict[str, float]], float]`, *optional*):
A function computing the objective to minimize or maximize from the metrics returned by the `evaluate`
method. Will default to [`~trainer_utils.default_compute_objective`].
n_trials (`int`, *optional*, defaults to 100):
The number of trial runs to test.
direction(`str`, *optional*, defaults to `"minimize"`):
Whether to optimize greater or lower objects. Can be `"minimize"` or `"maximize"`, you should pick
`"minimize"` when optimizing the validation loss, `"maximize"` when optimizing one or several metrics.
backend(`str` or [`~training_utils.HPSearchBackend`], *optional*):
The backend to use for hyperparameter search. Will default to optuna or Ray Tune or SigOpt, depending
on which one is installed. If all are installed, will default to optuna.
kwargs:
Additional keyword arguments passed along to `optuna.create_study` or `ray.tune.run`. For more
information see:
- the documentation of
[optuna.create_study](https://optuna.readthedocs.io/en/stable/reference/generated/optuna.study.create_study.html)
- the documentation of [tune.run](https://docs.ray.io/en/latest/tune/api_docs/execution.html#tune-run)
- the documentation of [sigopt](https://app.sigopt.com/docs/endpoints/experiments/create)
Returns:
[`trainer_utils.BestRun`]: All the information about the best run.
"""
if backend is None:
backend = default_hp_search_backend()
if backend is None:
raise RuntimeError(
"At least one of optuna or ray should be installed. "
"To install optuna run `pip install optuna`. "
"To install ray run `pip install ray[tune]`. "
"To install sigopt run `pip install sigopt`."
)
backend = HPSearchBackend(backend)
if backend == HPSearchBackend.OPTUNA and not is_optuna_available():
raise RuntimeError("You picked the optuna backend, but it is not installed. Use `pip install optuna`.")
if backend == HPSearchBackend.RAY and not is_ray_tune_available():
raise RuntimeError(
"You picked the Ray Tune backend, but it is not installed. Use `pip install 'ray[tune]'`."
)
if backend == HPSearchBackend.SIGOPT and not is_sigopt_available():
raise RuntimeError("You picked the sigopt backend, but it is not installed. Use `pip install sigopt`.")
if backend == HPSearchBackend.WANDB and not is_wandb_available():
raise RuntimeError("You picked the wandb backend, but it is not installed. Use `pip install wandb`.")
self.hp_search_backend = backend
if self.model_init is None:
raise RuntimeError(
"To use hyperparameter search, you need to pass your model through a model_init function."
)
self.hp_space = default_hp_space[backend] if hp_space is None else hp_space
self.hp_name = hp_name
self.compute_objective = default_compute_objective if compute_objective is None else compute_objective
backend_dict = {
HPSearchBackend.OPTUNA: run_hp_search_optuna,
HPSearchBackend.RAY: run_hp_search_ray,
HPSearchBackend.SIGOPT: run_hp_search_sigopt,
HPSearchBackend.WANDB: run_hp_search_wandb,
}
best_run = backend_dict[backend](self, n_trials, direction, **kwargs)
self.hp_search_backend = None
return best_run
def log(self, logs: Dict[str, float]) -> None:
"""
Log `logs` on the various objects watching training.
Subclass and override this method to inject custom behavior.
Args:
logs (`Dict[str, float]`):
The values to log.
"""
if self.state.epoch is not None:
logs["epoch"] = round(self.state.epoch, 2)
output = {**logs, **{"step": self.state.global_step}}
self.state.log_history.append(output)
self.control = self.callback_handler.on_log(self.args, self.state, self.control, logs)
def _prepare_input(self, data: Union[torch.Tensor, Any]) -> Union[torch.Tensor, Any]:
"""
Prepares one `data` before feeding it to the model, be it a tensor or a nested list/dictionary of tensors.
"""
if isinstance(data, Mapping):
return type(data)({k: self._prepare_input(v) for k, v in data.items()})
elif isinstance(data, (tuple, list)):
return type(data)(self._prepare_input(v) for v in data)
elif isinstance(data, torch.Tensor):
kwargs = dict(device=self.args.device)
if self.deepspeed and data.dtype != torch.int64:
# NLP models inputs are int64 and those get adjusted to the right dtype of the
# embedding. Other models such as wav2vec2's inputs are already float and thus
# may need special handling to match the dtypes of the model
kwargs.update(dict(dtype=self.args.hf_deepspeed_config.dtype()))
return data.to(**kwargs)
return data
def _prepare_inputs(self, inputs: Dict[str, Union[torch.Tensor, Any]]) -> Dict[str, Union[torch.Tensor, Any]]:
"""
Prepare `inputs` before feeding them to the model, converting them to tensors if they are not already and
handling potential state.
"""
inputs = self._prepare_input(inputs)
if len(inputs) == 0:
raise ValueError(
"The batch received was empty, your model won't be able to train on it. Double-check that your "
f"training dataset contains keys expected by the model: {','.join(self._signature_columns)}."
)
if self.args.past_index >= 0 and self._past is not None:
inputs["mems"] = self._past
return inputs
def autocast_smart_context_manager(self):
"""
A helper wrapper that creates an appropriate context manager for `autocast` while feeding it the desired
arguments, depending on the situation.
"""
if self.use_amp:
if version.parse(torch.__version__) >= version.parse("1.10"):
ctx_manager = autocast(dtype=self.amp_dtype)
else:
ctx_manager = autocast()
else:
ctx_manager = contextlib.nullcontext() if sys.version_info >= (3, 7) else contextlib.suppress()
return ctx_manager
def training_step(self, model: nn.Module, inputs: Dict[str, Union[torch.Tensor, Any]]) -> torch.Tensor:
"""
Perform a training step on a batch of inputs.
Subclass and override to inject custom behavior.
Args:
model (`nn.Module`):
The model to train.
inputs (`Dict[str, Union[torch.Tensor, Any]]`):
The inputs and targets of the model.
The dictionary will be unpacked before being fed to the model. Most models expect the targets under the
argument `labels`. Check your model's documentation for all accepted arguments.
Return:
`torch.Tensor`: The tensor with training loss on this batch.
"""
model.train()
inputs = self._prepare_inputs(inputs)
if is_sagemaker_mp_enabled():
scaler = self.scaler if self.do_grad_scaling else None
loss_mb = smp_forward_backward(model, inputs, self.args.gradient_accumulation_steps, scaler=scaler)
return loss_mb.reduce_mean().detach().to(self.args.device)
with self.autocast_smart_context_manager():
groups = inputs["group"]
group_distributions = inputs.get("group_distribution", None)
instance_weights = inputs.get("instance_weight", None)
group_counts = inputs.get("group_counts", None)
update_avg = inputs.get("update_avg", None)
batch_group_loss = inputs.get("batch_group_loss", None)
del inputs["group"]
if group_distributions is not None:
del inputs["group_distribution"]
if instance_weights is not None:
del inputs["instance_weight"]
if group_counts is not None:
del inputs["group_counts"]
if update_avg is not None:
del inputs["update_avg"]
if batch_group_loss is not None:
del inputs["batch_group_loss"]
loss, outputs = self.compute_loss(model, inputs, return_outputs=True) #return outputs in addition to loss, to record logits.
# loss on inividual elements of batch
if self.dro_args.is_robust:
y = inputs["labels"]
yhat = outputs[1]
if torch.isnan(loss).any():
import pdb; pdb.set_trace()
loss, group_loss = self.train_loss_computer.loss(loss, yhat, y, groups, group_distributions, instance_weights, batch_group_loss, group_counts, update_avg, is_training=True)
else:
loss = loss.mean() # reduce the loss here.
# Find logits and labels.
#TODO: During prediction, loss and outputs are returned, and loss variable is detached from the computational graph.
if isinstance(outputs, dict):
logits = tuple(v for k, v in outputs.items() if k not in ["loss"])
else:
logits = outputs[1:]
if self.args.n_gpu > 1:
loss = loss.mean() # mean() to average on multi-gpu parallel training
if self.args.gradient_accumulation_steps > 1 and not self.deepspeed:
# deepspeed handles loss scaling by gradient_accumulation_steps in its `backward`
loss = loss / self.args.gradient_accumulation_steps
if self.do_grad_scaling:
self.scaler.scale(loss).backward()
elif self.use_apex:
with amp.scale_loss(loss, self.optimizer) as scaled_loss:
scaled_loss.backward()
elif self.deepspeed:
# loss gets scaled under gradient_accumulation_steps in deepspeed
loss = self.deepspeed.backward(loss)
else:
loss.backward()
return loss.detach(), group_loss.detach(), logits
def compute_loss(self, model, inputs, return_outputs=False):
"""
How the loss is computed by Trainer. By default, all models return the loss in the first element.
Subclass and override for custom behavior.
"""
del inputs["guid"]
if self.label_smoother is not None and "labels" in inputs:
labels = inputs.pop("labels")
else:
labels = None
outputs = model(**inputs)
# loss should not be reduced.
# handle loss computation across GPUs.
# Save past state if it exists
# TODO: this needs to be fixed and made cleaner later.
if self.args.past_index >= 0:
self._past = outputs[self.args.past_index]
if labels is not None:
loss = self.label_smoother(outputs, labels)
else:
# We don't use .loss here since the model may return tuples instead of ModelOutput.
loss = outputs["loss"] if isinstance(outputs, dict) else outputs[0]
return (loss, outputs) if return_outputs else loss
def is_local_process_zero(self) -> bool:
"""
Whether or not this process is the local (e.g., on one machine if training in a distributed fashion on several
machines) main process.
"""
return self.args.local_process_index == 0
def is_world_process_zero(self) -> bool:
"""
Whether or not this process is the global main process (when training in a distributed fashion on several
machines, this is only going to be `True` for one process).
"""
# Special case for SageMaker ModelParallel since there process_index is dp_process_index, not the global
# process index.
if is_sagemaker_mp_enabled():
return smp.rank() == 0
else:
return self.args.process_index == 0
def save_model(self, output_dir: Optional[str] = None, _internal_call: bool = False):
"""
Will save the model, so you can reload it using `from_pretrained()`.
Will only save from the main process.
"""
if output_dir is None:
output_dir = self.args.output_dir
if is_torch_tpu_available():
self._save_tpu(output_dir)
elif is_sagemaker_mp_enabled():
# Calling the state_dict needs to be done on the wrapped model and on all processes.
state_dict = self.model_wrapped.state_dict()
if self.args.should_save:
self._save(output_dir, state_dict=state_dict)
elif (
ShardedDDPOption.ZERO_DP_2 in self.args.sharded_ddp or ShardedDDPOption.ZERO_DP_3 in self.args.sharded_ddp
):
state_dict = self.model.state_dict()
if self.args.should_save:
self._save(output_dir, state_dict=state_dict)
elif self.deepspeed:
# this takes care of everything as long as we aren't under zero3
if self.args.should_save:
self._save(output_dir)
if is_deepspeed_zero3_enabled():
# It's too complicated to try to override different places where the weights dump gets
# saved, so since under zero3 the file is bogus, simply delete it. The user should
# either user deepspeed checkpoint to resume or to recover full weights use
# zero_to_fp32.py stored in the checkpoint.
if self.args.should_save:
file = os.path.join(output_dir, WEIGHTS_NAME)
if os.path.isfile(file):
# logger.info(f"deepspeed zero3: removing {file}, see zero_to_fp32.py to recover weights")
os.remove(file)
# now save the real model if stage3_gather_fp16_weights_on_model_save=True
# if false it will not be saved.
# This must be called on all ranks
if not self.deepspeed.save_fp16_model(output_dir, WEIGHTS_NAME):
logger.warning(
"deepspeed.save_fp16_model didn't save the model, since stage3_gather_fp16_weights_on_model_save=false. "
"Saving the full checkpoint instead, use zero_to_fp32.py to recover weights"
)
self.deepspeed.save_checkpoint(output_dir)
elif self.args.should_save:
self._save(output_dir)
def _save_tpu(self, output_dir: Optional[str] = None):
output_dir = output_dir if output_dir is not None else self.args.output_dir
logger.info(f"Saving model checkpoint to {output_dir}")
if xm.is_master_ordinal():
os.makedirs(output_dir, exist_ok=True)
torch.save(self.args, os.path.join(output_dir, TRAINING_ARGS_NAME))
# Save a trained model and configuration using `save_pretrained()`.
# They can then be reloaded using `from_pretrained()`
xm.rendezvous("saving_checkpoint")
if not isinstance(self.model, PreTrainedModel):
if isinstance(unwrap_model(self.model), PreTrainedModel):
unwrap_model(self.model).save_pretrained(
output_dir,
save_config=self.args.should_save,
state_dict=self.model.state_dict(),
save_function=xm.save,
)
else:
logger.info("Trainer.model is not a `PreTrainedModel`, only saving its state dict.")
state_dict = self.model.state_dict()
xm.save(state_dict, os.path.join(output_dir, WEIGHTS_NAME))
else:
self.model.save_pretrained(output_dir, save_config=self.args.should_save, save_function=xm.save)
if self.tokenizer is not None and self.args.should_save:
self.tokenizer.save_pretrained(output_dir)
def _save(self, output_dir: Optional[str] = None, state_dict=None):
# If we are executing this function, we are the process zero, so we don't check for that.
output_dir = output_dir if output_dir is not None else self.args.output_dir
os.makedirs(output_dir, exist_ok=True)
logger.info(f"Saving model checkpoint to {output_dir}")
# Save a trained model and configuration using `save_pretrained()`.
# They can then be reloaded using `from_pretrained()`
if not isinstance(self.model, PreTrainedModel):
if isinstance(unwrap_model(self.model), PreTrainedModel):
if state_dict is None:
state_dict = self.model.state_dict()
unwrap_model(self.model).save_pretrained(output_dir, state_dict=state_dict)
else:
logger.info("Trainer.model is not a `PreTrainedModel`, only saving its state dict.")
if state_dict is None:
state_dict = self.model.state_dict()
torch.save(state_dict, os.path.join(output_dir, WEIGHTS_NAME))
else:
self.model.save_pretrained(output_dir, state_dict=state_dict)
if self.tokenizer is not None:
self.tokenizer.save_pretrained(output_dir)
# Good practice: save your training arguments together with the trained model
torch.save(self.args, os.path.join(output_dir, TRAINING_ARGS_NAME))
def store_flos(self):
# Storing the number of floating-point operations that went into the model
if self.args.local_rank != -1:
self.state.total_flos += (
distributed_broadcast_scalars([self.current_flos], device=self.args.device).sum().item()
)
self.current_flos = 0
else:
self.state.total_flos += self.current_flos
self.current_flos = 0
def _sorted_checkpoints(
self, output_dir=None, checkpoint_prefix=PREFIX_CHECKPOINT_DIR, use_mtime=False
) -> List[str]:
ordering_and_checkpoint_path = []
glob_checkpoints = [str(x) for x in Path(output_dir).glob(f"{checkpoint_prefix}-*")]
for path in glob_checkpoints:
if use_mtime:
ordering_and_checkpoint_path.append((os.path.getmtime(path), path))
else:
regex_match = re.match(f".*{checkpoint_prefix}-([0-9]+)", path)
if regex_match is not None and regex_match.groups() is not None:
ordering_and_checkpoint_path.append((int(regex_match.groups()[0]), path))
checkpoints_sorted = sorted(ordering_and_checkpoint_path)
checkpoints_sorted = [checkpoint[1] for checkpoint in checkpoints_sorted]
# Make sure we don't delete the best model.
if self.state.best_model_checkpoint is not None:
if "best" in self.state.best_model_checkpoint:
# no need to remove any checkpoint from list, since best checkpoint is being explicitly saved.
return checkpoints_sorted
best_model_index = checkpoints_sorted.index(str(Path(self.state.best_model_checkpoint)))
for i in range(best_model_index, len(checkpoints_sorted) - 2):
checkpoints_sorted[i], checkpoints_sorted[i + 1] = checkpoints_sorted[i + 1], checkpoints_sorted[i]
return checkpoints_sorted
def _rotate_checkpoints(self, use_mtime=False, output_dir=None) -> None:
if self.args.save_total_limit is None or self.args.save_total_limit <= 0:
return
# Check if we should delete older checkpoint(s)
checkpoints_sorted = self._sorted_checkpoints(use_mtime=use_mtime, output_dir=output_dir)
if len(checkpoints_sorted) <= self.args.save_total_limit:
return
# If save_total_limit=1 with load_best_model_at_end=True, we could end up deleting the last checkpoint, which
# we don't do to allow resuming.
save_total_limit = self.args.save_total_limit
if (
self.state.best_model_checkpoint is not None
and self.args.save_total_limit == 1
and checkpoints_sorted[-1] != self.state.best_model_checkpoint
):
save_total_limit = 2
number_of_checkpoints_to_delete = max(0, len(checkpoints_sorted) - save_total_limit)
checkpoints_to_be_deleted = checkpoints_sorted[:number_of_checkpoints_to_delete]
for checkpoint in checkpoints_to_be_deleted:
logger.info(f"Deleting older checkpoint [{checkpoint}] due to args.save_total_limit")
shutil.rmtree(checkpoint)
def evaluate(
self,
eval_dataset: Optional[Dataset] = None,
ignore_keys: Optional[List[str]] = None,
metric_key_prefix: str = "eval",
) -> Dict[str, float]:
"""
Run evaluation and returns metrics.
The calling script will be responsible for providing a method to compute metrics, as they are task-dependent
(pass it to the init `compute_metrics` argument).
You can also subclass and override this method to inject custom behavior.
Args:
eval_dataset (`Dataset`, *optional*):
Pass a dataset if you wish to override `self.eval_dataset`. If it is an `datasets.Dataset`, columns not
accepted by the `model.forward()` method are automatically removed. It must implement the `__len__`
method.
ignore_keys (`Lst[str]`, *optional*):
A list of keys in the output of your model (if it is a dictionary) that should be ignored when
gathering predictions.
metric_key_prefix (`str`, *optional*, defaults to `"eval"`):
An optional prefix to be used as the metrics key prefix. For example the metrics "bleu" will be named
"eval_bleu" if the prefix is "eval" (default)
Returns:
A dictionary containing the evaluation loss and the potential metrics computed from the predictions. The
dictionary also contains the epoch number which comes from the training state.
"""
# memory metrics - must set up as early as possible
self._memory_tracker.start()
eval_dataloader = self.get_eval_dataloader(self.eval_dataset)
start_time = time.time()
# Declare an evaluation loss computer object.
if self.dro_args.is_robust:
if not self.dro_args.use_group_weights:
group_list = [ex["group"] for ex in self.eval_dataset]
unique_groups, group_counts = np.unique(group_list, return_counts=True)
n_groups = len(unique_groups)
group_counts = torch.LongTensor(group_counts)
else:
group_distributions = np.asarray([ex["group_distribution"] for ex in self.eval_dataset])
group_list = np.argmax(group_distributions, axis=1)
unique_groups, group_counts = np.unique(group_list, return_counts=True)
n_groups = len(unique_groups)
group_counts = torch.LongTensor(group_counts)
self.val_loss_computer = LossComputer(
dro_args=self.dro_args,
training_args=self.args,
# dataset=dataset['train_data'], ## Why is this needed? to compute n_groups, group_counts which are passed as arguments now.
n_groups=n_groups,
group_counts=group_counts)
# adj=adjustments)
eval_loop = self.prediction_loop if self.args.use_legacy_prediction_loop else self.evaluation_loop
output = eval_loop(
eval_dataloader,
description="Evaluation",
# No point gathering the predictions if there are no metrics, otherwise we defer to
# self.args.prediction_loss_only
prediction_loss_only=True if self.compute_metrics is None else None,
ignore_keys=ignore_keys,
metric_key_prefix=metric_key_prefix,
)
# Print stats after evaluation loop complete.
# if self.dro_args.is_robust:
# self.val_loss_computer.log_stats(logger, True)
# self.log(self.val_loss_computer.get_stats(self.model, self.args))
if self.dro_args.is_robust and self.dro_args.automatic_adjustment:
gen_gap = self.val_loss_computer.avg_group_loss - self.train_loss_computer.exp_avg_loss
adjustments = gen_gap * torch.sqrt(self.train_loss_computer.group_counts)
self.train_loss_computer.adj = adjustments
logger.info('Adjustments updated\n')
for group_idx in range(self.train_loss_computer.n_groups):
logger.info(
f' {group_idx}:\t'
f'adj = {self.train_loss_computer.adj[group_idx]:.3f}\n')
total_batch_size = self.args.eval_batch_size * self.args.world_size
output.metrics.update(
speed_metrics(
metric_key_prefix,
start_time,
num_samples=output.num_samples,
num_steps=math.ceil(output.num_samples / total_batch_size),
)
)
self.log(output.metrics)
if DebugOption.TPU_METRICS_DEBUG in self.args.debug:
# tpu-comment: Logging debug metrics for PyTorch/XLA (compile, execute times, ops, etc.)
xm.master_print(met.metrics_report())
self.control = self.callback_handler.on_evaluate(self.args, self.state, self.control, output.metrics)
self._memory_tracker.stop_and_update_metrics(output.metrics)
return output.metrics
def predict(
self, test_dataset: Dataset, ignore_keys: Optional[List[str]] = None, metric_key_prefix: str = "test"
) -> PredictionOutput:
"""
Run prediction and returns predictions and potential metrics.
Depending on the dataset and your use case, your test dataset may contain labels. In that case, this method
will also return metrics, like in `evaluate()`.
Args:
test_dataset (`Dataset`):
Dataset to run the predictions on. If it is an `datasets.Dataset`, columns not accepted by the
`model.forward()` method are automatically removed. Has to implement the method `__len__`
ignore_keys (`Lst[str]`, *optional*):
A list of keys in the output of your model (if it is a dictionary) that should be ignored when
gathering predictions.
metric_key_prefix (`str`, *optional*, defaults to `"test"`):
An optional prefix to be used as the metrics key prefix. For example the metrics "bleu" will be named
"test_bleu" if the prefix is "test" (default)
<Tip>
If your predictions or labels have different sequence length (for instance because you're doing dynamic padding
in a token classification task) the predictions will be padded (on the right) to allow for concatenation into
one array. The padding index is -100.
</Tip>
Returns: *NamedTuple* A namedtuple with the following keys:
- predictions (`np.ndarray`): The predictions on `test_dataset`.
- label_ids (`np.ndarray`, *optional*): The labels (if the dataset contained some).
- metrics (`Dict[str, float]`, *optional*): The potential dictionary of metrics (if the dataset contained
labels).
"""
# memory metrics - must set up as early as possible
self._memory_tracker.start()
test_dataloader = self.get_test_dataloader(test_dataset)
start_time = time.time()
eval_loop = self.prediction_loop if self.args.use_legacy_prediction_loop else self.evaluation_loop
output = eval_loop(
test_dataloader, description="Prediction", ignore_keys=ignore_keys, metric_key_prefix=metric_key_prefix
)
total_batch_size = self.args.eval_batch_size * self.args.world_size
output.metrics.update(
speed_metrics(
metric_key_prefix,
start_time,
num_samples=output.num_samples,
num_steps=math.ceil(output.num_samples / total_batch_size),
)
)
self._memory_tracker.stop_and_update_metrics(output.metrics)
return PredictionOutput(predictions=output.predictions, label_ids=output.label_ids, metrics=output.metrics)
def evaluation_loop(
self,
dataloader: DataLoader,
description: str,
prediction_loss_only: Optional[bool] = None,
ignore_keys: Optional[List[str]] = None,
metric_key_prefix: str = "eval",
) -> EvalLoopOutput:
"""
Prediction/evaluation loop, shared by `Trainer.evaluate()` and `Trainer.predict()`.
Works both with or without labels.
"""
args = self.args
prediction_loss_only = prediction_loss_only if prediction_loss_only is not None else args.prediction_loss_only
# if eval is called w/o train init deepspeed here
if args.deepspeed and not self.deepspeed:
# XXX: eval doesn't have `resume_from_checkpoint` arg but we should be able to do eval
# from the checkpoint eventually
deepspeed_engine, _, _ = deepspeed_init(
self, num_training_steps=0, resume_from_checkpoint=None, inference=True
)
self.model = deepspeed_engine.module
self.model_wrapped = deepspeed_engine
self.deepspeed = deepspeed_engine
model = self._wrap_model(self.model, training=False)
# if full fp16 or bf16 eval is wanted and this ``evaluation`` or ``predict`` isn't called
# while ``train`` is running, cast it to the right dtype first and then put on device
if not self.is_in_train:
if args.fp16_full_eval:
model = model.to(dtype=torch.float16, device=args.device)
elif args.bf16_full_eval:
model = model.to(dtype=torch.bfloat16, device=args.device)
batch_size = dataloader.batch_size
logger.info(f"***** Running {description} *****")
if has_length(dataloader.dataset):
logger.info(f" Num examples = {self.num_examples(dataloader)}")
else:
logger.info(" Num examples: Unknown")
logger.info(f" Batch size = {batch_size}")
model.eval()
self.callback_handler.eval_dataloader = dataloader
# Do this before wrapping.
eval_dataset = dataloader.dataset
if is_torch_tpu_available():
dataloader = pl.ParallelLoader(dataloader, [args.device]).per_device_loader(args.device)
if args.past_index >= 0:
self._past = None
# Initialize containers
# losses/preds/labels on GPU/TPU (accumulated for eval_accumulation_steps)
losses_host = None
preds_host = None
labels_host = None
# losses/preds/labels on CPU (final containers)
all_losses = None
all_preds = None
all_labels = None
# Will be useful when we have an iterable dataset so don't know its length.
observed_num_examples = 0
# Main evaluation loop
for step, inputs in enumerate(dataloader):
# Update the observed num examples
observed_batch_size = find_batch_size(inputs)
if observed_batch_size is not None:
observed_num_examples += observed_batch_size
# For batch samplers, batch_size is not known by the dataloader in advance.
if batch_size is None:
batch_size = observed_batch_size
# Prediction step
# TODO(bparan): Inputs needs to be stripped of non-tensor metadata to be sent to model forward function.
# Metadata information can be used to either log model performance, or provide group information.
# del inputs["guid"]
loss, logits, labels = self.prediction_step(model, inputs, prediction_loss_only, ignore_keys=ignore_keys)
if is_torch_tpu_available():
xm.mark_step()
# Update containers on host
if loss is not None:
losses = self._nested_gather(loss.repeat(batch_size))
losses_host = losses if losses_host is None else torch.cat((losses_host, losses), dim=0)
if labels is not None:
labels = self._pad_across_processes(labels)
labels = self._nested_gather(labels)
labels_host = labels if labels_host is None else nested_concat(labels_host, labels, padding_index=-100)
if logits is not None:
logits = self._pad_across_processes(logits)
logits = self._nested_gather(logits)
if self.preprocess_logits_for_metrics is not None:
logits = self.preprocess_logits_for_metrics(logits, labels)
preds_host = logits if preds_host is None else nested_concat(preds_host, logits, padding_index=-100)
self.control = self.callback_handler.on_prediction_step(args, self.state, self.control)
# Gather all tensors and put them back on the CPU if we have done enough accumulation steps.
if args.eval_accumulation_steps is not None and (step + 1) % args.eval_accumulation_steps == 0:
if losses_host is not None:
losses = nested_numpify(losses_host)
all_losses = losses if all_losses is None else np.concatenate((all_losses, losses), axis=0)
if preds_host is not None:
logits = nested_numpify(preds_host)
all_preds = logits if all_preds is None else nested_concat(all_preds, logits, padding_index=-100)
if labels_host is not None:
labels = nested_numpify(labels_host)
all_labels = (
labels if all_labels is None else nested_concat(all_labels, labels, padding_index=-100)
)
# Set back to None to begin a new accumulation
losses_host, preds_host, labels_host = None, None, None
if args.past_index and hasattr(self, "_past"):
# Clean the state at the end of the evaluation loop
delattr(self, "_past")
# Gather all remaining tensors and put them back on the CPU
if losses_host is not None:
losses = nested_numpify(losses_host)
all_losses = losses if all_losses is None else np.concatenate((all_losses, losses), axis=0)
if preds_host is not None:
logits = nested_numpify(preds_host)
all_preds = logits if all_preds is None else nested_concat(all_preds, logits, padding_index=-100)
if labels_host is not None:
labels = nested_numpify(labels_host)
all_labels = labels if all_labels is None else nested_concat(all_labels, labels, padding_index=-100)
# Number of samples
if has_length(eval_dataset):
num_samples = len(eval_dataset)
# The instance check is weird and does not actually check for the type, but whether the dataset has the right
# methods. Therefore we need to make sure it also has the attribute.
elif isinstance(eval_dataset, IterableDatasetShard) and hasattr(eval_dataset, "num_examples"):
num_samples = eval_dataset.num_examples
else:
num_samples = observed_num_examples
# Number of losses has been rounded to a multiple of batch_size and in a distributed training, the number of
# samplers has been rounded to a multiple of batch_size, so we truncate.
if all_losses is not None:
all_losses = all_losses[:num_samples]
if all_preds is not None:
all_preds = nested_truncate(all_preds, num_samples)
if all_labels is not None:
all_labels = nested_truncate(all_labels, num_samples)
# Metrics!
if self.compute_metrics is not None and all_preds is not None and all_labels is not None:
metrics = self.compute_metrics(EvalPrediction(predictions=all_preds, label_ids=all_labels))
else:
metrics = {}
# Compute Worst Group Metrics, if group information is evailable in the evaluation set.
if hasattr(self, "val_loss_computer"):
n_eval_groups = self.val_loss_computer.n_groups
key = "accuracy"
for group_idx in range(n_eval_groups):
metrics[f"group_{key}_{group_idx}"] = self.val_loss_computer.avg_group_acc[group_idx]
# To be JSON-serializable, we need to remove numpy types or zero-d tensors
metrics = denumpify_detensorize(metrics)
if all_losses is not None:
metrics[f"{metric_key_prefix}_loss"] = all_losses.mean().item()
# Prefix all keys with metric_key_prefix + '_'
for key in list(metrics.keys()):
if not key.startswith(f"{metric_key_prefix}_"):
metrics[f"{metric_key_prefix}_{key}"] = metrics.pop(key)
return EvalLoopOutput(predictions=all_preds, label_ids=all_labels, metrics=metrics, num_samples=num_samples)
def _nested_gather(self, tensors, name=None):
"""
Gather value of `tensors` (tensor or list/tuple of nested tensors) and convert them to numpy before
concatenating them to `gathered`
"""
if tensors is None:
return
if is_torch_tpu_available():
if name is None:
name = "nested_gather"
tensors = nested_xla_mesh_reduce(tensors, name)
elif is_sagemaker_mp_enabled():
tensors = smp_gather(tensors)
elif self.args.local_rank != -1:
tensors = distributed_concat(tensors)
return tensors
# Copied from Accelerate.
def _pad_across_processes(self, tensor, pad_index=-100):
"""
Recursively pad the tensors in a nested list/tuple/dictionary of tensors from all devices to the same size so
they can safely be gathered.
"""
if isinstance(tensor, (list, tuple)):
return type(tensor)(self._pad_across_processes(t, pad_index=pad_index) for t in tensor)
elif isinstance(tensor, dict):
return type(tensor)({k: self._pad_across_processes(v, pad_index=pad_index) for k, v in tensor.items()})
elif not isinstance(tensor, torch.Tensor):
raise TypeError(
f"Can't pad the values of type {type(tensor)}, only of nested list/tuple/dicts of tensors."
)
if len(tensor.shape) < 2:
return tensor
# Gather all sizes
size = torch.tensor(tensor.shape, device=tensor.device)[None]
sizes = self._nested_gather(size).cpu()
max_size = max(s[1] for s in sizes)
if tensor.shape[1] == max_size:
return tensor
# Then pad to the maximum size
old_size = tensor.shape
new_size = list(old_size)
new_size[1] = max_size
new_tensor = tensor.new_zeros(tuple(new_size)) + pad_index
new_tensor[:, : old_size[1]] = tensor
return new_tensor
def prediction_step(
self,
model: nn.Module,
inputs: Dict[str, Union[torch.Tensor, Any]],
prediction_loss_only: bool,
ignore_keys: Optional[List[str]] = None,
) -> Tuple[Optional[torch.Tensor], Optional[torch.Tensor], Optional[torch.Tensor]]:
"""
Perform an evaluation step on `model` using `inputs`.
Subclass and override to inject custom behavior.
Args:
model (`nn.Module`):
The model to evaluate.
inputs (`Dict[str, Union[torch.Tensor, Any]]`):
The inputs and targets of the model.
The dictionary will be unpacked before being fed to the model. Most models expect the targets under the
argument `labels`. Check your model's documentation for all accepted arguments.
prediction_loss_only (`bool`):
Whether or not to return the loss only.
ignore_keys (`Lst[str]`, *optional*):
A list of keys in the output of your model (if it is a dictionary) that should be ignored when
gathering predictions.
Return:
Tuple[Optional[torch.Tensor], Optional[torch.Tensor], Optional[torch.Tensor]]: A tuple with the loss,
logits and labels (each being optional).
"""
has_labels = all(inputs.get(k) is not None for k in self.label_names)
inputs = self._prepare_inputs(inputs)
if ignore_keys is None:
if hasattr(self.model, "config"):
ignore_keys = getattr(self.model.config, "keys_to_ignore_at_inference", [])
else:
ignore_keys = []
# labels may be popped when computing the loss (label smoothing for instance) so we grab them first.
if has_labels:
labels = nested_detach(tuple(inputs.get(name) for name in self.label_names))
if len(labels) == 1:
labels = labels[0]
else:
labels = None
with torch.no_grad():
if is_sagemaker_mp_enabled():
raw_outputs = smp_forward_only(model, inputs)
if has_labels:
if isinstance(raw_outputs, dict):
loss_mb = raw_outputs["loss"]
logits_mb = tuple(v for k, v in raw_outputs.items() if k not in ignore_keys + ["loss"])
else:
loss_mb = raw_outputs[0]
logits_mb = raw_outputs[1:]
loss = loss_mb.reduce_mean().detach().cpu()
logits = smp_nested_concat(logits_mb)
else:
loss = None
if isinstance(raw_outputs, dict):
logits_mb = tuple(v for k, v in raw_outputs.items() if k not in ignore_keys)
else:
logits_mb = raw_outputs
logits = smp_nested_concat(logits_mb)
else:
if has_labels:
with self.autocast_smart_context_manager():
groups = inputs["group"]
group_distributions = inputs.get("group_distribution", None)
instance_weights = inputs.get("instance_weight", None)
del inputs["group"]
if group_distributions is not None:
del inputs["group_distribution"]
if instance_weights is not None:
del inputs["instance_weight"]
loss, outputs = self.compute_loss(model, inputs, return_outputs=True)
# loss on inividual elements of batch
if self.dro_args.is_robust:
y = inputs["labels"]
yhat = outputs[1]
if torch.isnan(loss).any():
import pdb; pdb.set_trace()
loss = self.val_loss_computer.loss(loss, yhat, y, groups, group_distributions, is_training=True)
else:
loss = loss.mean() # reduce the loss here.
loss = loss.mean().detach()
if isinstance(outputs, dict):
logits = tuple(v for k, v in outputs.items() if k not in ignore_keys + ["loss"])
else:
logits = outputs[1:]
else:
loss = None
with self.autocast_smart_context_manager():
#TODO: Remove non-tensorizable elements from inputs.
del inputs["guid"]
del inputs["group"]
if self.dro_args.use_group_weights or "group_distribution" in inputs:
del inputs["group_distribution"]
if "instance_weight" in inputs:
del inputs["instance_weight"]
outputs = model(**inputs)
if isinstance(outputs, dict):
logits = tuple(v for k, v in outputs.items() if k not in ignore_keys)
else:
logits = outputs
# TODO: this needs to be fixed and made cleaner later.
if self.args.past_index >= 0:
self._past = outputs[self.args.past_index - 1]
if prediction_loss_only:
return (loss, None, None)
logits = nested_detach(logits)
if len(logits) == 1:
logits = logits[0]
return (loss, logits, labels)
def floating_point_ops(self, inputs: Dict[str, Union[torch.Tensor, Any]]):
"""
For models that inherit from [`PreTrainedModel`], uses that method to compute the number of floating point
operations for every backward + forward pass. If using another model, either implement such a method in the
model or subclass and override this method.
Args:
inputs (`Dict[str, Union[torch.Tensor, Any]]`):
The inputs and targets of the model.
Returns:
`int`: The number of floating-point operations.
"""
if hasattr(self.model, "floating_point_ops"):
return self.model.floating_point_ops(inputs)
else:
return 0
| 148,043 | 47.380392 | 189 | py |
robust-transformers | robust-transformers-main/src/transformers/trainer_callback.py | # coding=utf-8
# Copyright 2020-present the HuggingFace Inc. team.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
"""
Callbacks to use with the Trainer class and customize the training loop.
"""
import dataclasses
import json
from dataclasses import dataclass
from typing import Dict, List, Optional, Union
import numpy as np
from tqdm.auto import tqdm
from .trainer_utils import IntervalStrategy, has_length
from .training_args import TrainingArguments
from .utils import logging
logger = logging.get_logger(__name__)
@dataclass
class TrainerState:
"""
A class containing the [`Trainer`] inner state that will be saved along the model and optimizer when checkpointing
and passed to the [`TrainerCallback`].
<Tip>
In all this class, one step is to be understood as one update step. When using gradient accumulation, one update
step may require several forward and backward passes: if you use `gradient_accumulation_steps=n`, then one update
step requires going through *n* batches.
</Tip>
Args:
epoch (`float`, *optional*):
Only set during training, will represent the epoch the training is at (the decimal part being the
percentage of the current epoch completed).
global_step (`int`, *optional*, defaults to 0):
During training, represents the number of update steps completed.
max_steps (`int`, *optional*, defaults to 0):
The number of update steps to do during the current training.
total_flos (`float`, *optional*, defaults to 0):
The total number of floating operations done by the model since the beginning of training (stored as floats
to avoid overflow).
log_history (`List[Dict[str, float]]`, *optional*):
The list of logs done since the beginning of training.
best_metric (`float`, *optional*):
When tracking the best model, the value of the best metric encountered so far.
best_model_checkpoint (`str`, *optional*):
When tracking the best model, the value of the name of the checkpoint for the best model encountered so
far.
is_local_process_zero (`bool`, *optional*, defaults to `True`):
Whether or not this process is the local (e.g., on one machine if training in a distributed fashion on
several machines) main process.
is_world_process_zero (`bool`, *optional*, defaults to `True`):
Whether or not this process is the global main process (when training in a distributed fashion on several
machines, this is only going to be `True` for one process).
is_hyper_param_search (`bool`, *optional*, defaults to `False`):
Whether we are in the process of a hyper parameter search using Trainer.hyperparameter_search. This will
impact the way data will be logged in TensorBoard.
"""
epoch: Optional[float] = None
global_step: int = 0
max_steps: int = 0
num_train_epochs: int = 0
total_flos: float = 0
log_history: List[Dict[str, float]] = None
best_metric: Optional[float] = None
best_model_checkpoint: Optional[str] = None
is_local_process_zero: bool = True
is_world_process_zero: bool = True
is_hyper_param_search: bool = False
trial_name: str = None
trial_params: Dict[str, Union[str, float, int, bool]] = None
def __post_init__(self):
if self.log_history is None:
self.log_history = []
def save_to_json(self, json_path: str):
"""Save the content of this instance in JSON format inside `json_path`."""
json_string = json.dumps(dataclasses.asdict(self), indent=2, sort_keys=True) + "\n"
with open(json_path, "w", encoding="utf-8") as f:
f.write(json_string)
@classmethod
def load_from_json(cls, json_path: str):
"""Create an instance from the content of `json_path`."""
with open(json_path, "r", encoding="utf-8") as f:
text = f.read()
return cls(**json.loads(text))
@dataclass
class TrainerControl:
"""
A class that handles the [`Trainer`] control flow. This class is used by the [`TrainerCallback`] to activate some
switches in the training loop.
Args:
should_training_stop (`bool`, *optional*, defaults to `False`):
Whether or not the training should be interrupted.
If `True`, this variable will not be set back to `False`. The training will just stop.
should_epoch_stop (`bool`, *optional*, defaults to `False`):
Whether or not the current epoch should be interrupted.
If `True`, this variable will be set back to `False` at the beginning of the next epoch.
should_save (`bool`, *optional*, defaults to `False`):
Whether or not the model should be saved at this step.
If `True`, this variable will be set back to `False` at the beginning of the next step.
should_evaluate (`bool`, *optional*, defaults to `False`):
Whether or not the model should be evaluated at this step.
If `True`, this variable will be set back to `False` at the beginning of the next step.
should_log (`bool`, *optional*, defaults to `False`):
Whether or not the logs should be reported at this step.
If `True`, this variable will be set back to `False` at the beginning of the next step.
"""
should_training_stop: bool = False
should_epoch_stop: bool = False
should_save: bool = False
should_evaluate: bool = False
should_log: bool = False
def _new_training(self):
"""Internal method that resets the variable for a new training."""
self.should_training_stop = False
def _new_epoch(self):
"""Internal method that resets the variable for a new epoch."""
self.should_epoch_stop = False
def _new_step(self):
"""Internal method that resets the variable for a new step."""
self.should_save = False
self.should_evaluate = False
self.should_log = False
class TrainerCallback:
"""
A class for objects that will inspect the state of the training loop at some events and take some decisions. At
each of those events the following arguments are available:
Args:
args ([`TrainingArguments`]):
The training arguments used to instantiate the [`Trainer`].
state ([`TrainerState`]):
The current state of the [`Trainer`].
control ([`TrainerControl`]):
The object that is returned to the [`Trainer`] and can be used to make some decisions.
model ([`PreTrainedModel`] or `torch.nn.Module`):
The model being trained.
tokenizer ([`PreTrainedTokenizer`]):
The tokenizer used for encoding the data.
optimizer (`torch.optim.Optimizer`):
The optimizer used for the training steps.
lr_scheduler (`torch.optim.lr_scheduler.LambdaLR`):
The scheduler used for setting the learning rate.
train_dataloader (`torch.utils.data.DataLoader`, *optional*):
The current dataloader used for training.
eval_dataloader (`torch.utils.data.DataLoader`, *optional*):
The current dataloader used for training.
metrics (`Dict[str, float]`):
The metrics computed by the last evaluation phase.
Those are only accessible in the event `on_evaluate`.
logs (`Dict[str, float]`):
The values to log.
Those are only accessible in the event `on_log`.
The `control` object is the only one that can be changed by the callback, in which case the event that changes it
should return the modified version.
The argument `args`, `state` and `control` are positionals for all events, all the others are grouped in `kwargs`.
You can unpack the ones you need in the signature of the event using them. As an example, see the code of the
simple [`~transformer.PrinterCallback`].
Example:
```python
class PrinterCallback(TrainerCallback):
def on_log(self, args, state, control, logs=None, **kwargs):
_ = logs.pop("total_flos", None)
if state.is_local_process_zero:
print(logs)
```"""
def on_init_end(self, args: TrainingArguments, state: TrainerState, control: TrainerControl, **kwargs):
"""
Event called at the end of the initialization of the [`Trainer`].
"""
pass
def on_train_begin(self, args: TrainingArguments, state: TrainerState, control: TrainerControl, **kwargs):
"""
Event called at the beginning of training.
"""
pass
def on_train_end(self, args: TrainingArguments, state: TrainerState, control: TrainerControl, **kwargs):
"""
Event called at the end of training.
"""
pass
def on_epoch_begin(self, args: TrainingArguments, state: TrainerState, control: TrainerControl, **kwargs):
"""
Event called at the beginning of an epoch.
"""
pass
def on_epoch_end(self, args: TrainingArguments, state: TrainerState, control: TrainerControl, **kwargs):
"""
Event called at the end of an epoch.
"""
pass
def on_step_begin(self, args: TrainingArguments, state: TrainerState, control: TrainerControl, **kwargs):
"""
Event called at the beginning of a training step. If using gradient accumulation, one training step might take
several inputs.
"""
pass
def on_substep_end(self, args: TrainingArguments, state: TrainerState, control: TrainerControl, **kwargs):
"""
Event called at the end of an substep during gradient accumulation.
"""
pass
def on_step_end(self, args: TrainingArguments, state: TrainerState, control: TrainerControl, **kwargs):
"""
Event called at the end of a training step. If using gradient accumulation, one training step might take
several inputs.
"""
pass
def on_evaluate(self, args: TrainingArguments, state: TrainerState, control: TrainerControl, **kwargs):
"""
Event called after an evaluation phase.
"""
pass
def on_save(self, args: TrainingArguments, state: TrainerState, control: TrainerControl, **kwargs):
"""
Event called after a checkpoint save.
"""
pass
def on_log(self, args: TrainingArguments, state: TrainerState, control: TrainerControl, **kwargs):
"""
Event called after logging the last logs.
"""
pass
def on_prediction_step(self, args: TrainingArguments, state: TrainerState, control: TrainerControl, **kwargs):
"""
Event called after a prediction step.
"""
pass
class CallbackHandler(TrainerCallback):
"""Internal class that just calls the list of callbacks in order."""
def __init__(self, callbacks, model, tokenizer, optimizer, lr_scheduler):
self.callbacks = []
for cb in callbacks:
self.add_callback(cb)
self.model = model
self.tokenizer = tokenizer
self.optimizer = optimizer
self.lr_scheduler = lr_scheduler
self.train_dataloader = None
self.eval_dataloader = None
if not any(isinstance(cb, DefaultFlowCallback) for cb in self.callbacks):
logger.warning(
"The Trainer will not work properly if you don't have a `DefaultFlowCallback` in its callbacks. You\n"
+ "should add one before training with `trainer.add_callback(DefaultFlowCallback). The current list of"
+ "callbacks is\n:"
+ self.callback_list
)
def add_callback(self, callback):
cb = callback() if isinstance(callback, type) else callback
cb_class = callback if isinstance(callback, type) else callback.__class__
if cb_class in [c.__class__ for c in self.callbacks]:
logger.warning(
f"You are adding a {cb_class} to the callbacks of this Trainer, but there is already one. The current"
+ "list of callbacks is\n:"
+ self.callback_list
)
self.callbacks.append(cb)
def pop_callback(self, callback):
if isinstance(callback, type):
for cb in self.callbacks:
if isinstance(cb, callback):
self.callbacks.remove(cb)
return cb
else:
for cb in self.callbacks:
if cb == callback:
self.callbacks.remove(cb)
return cb
def remove_callback(self, callback):
if isinstance(callback, type):
for cb in self.callbacks:
if isinstance(cb, callback):
self.callbacks.remove(cb)
return
else:
self.callbacks.remove(callback)
@property
def callback_list(self):
return "\n".join(cb.__class__.__name__ for cb in self.callbacks)
def on_init_end(self, args: TrainingArguments, state: TrainerState, control: TrainerControl):
return self.call_event("on_init_end", args, state, control)
def on_train_begin(self, args: TrainingArguments, state: TrainerState, control: TrainerControl):
control.should_training_stop = False
return self.call_event("on_train_begin", args, state, control)
def on_train_end(self, args: TrainingArguments, state: TrainerState, control: TrainerControl):
return self.call_event("on_train_end", args, state, control)
def on_epoch_begin(self, args: TrainingArguments, state: TrainerState, control: TrainerControl):
control.should_epoch_stop = False
return self.call_event("on_epoch_begin", args, state, control)
def on_epoch_end(self, args: TrainingArguments, state: TrainerState, control: TrainerControl):
return self.call_event("on_epoch_end", args, state, control)
def on_step_begin(self, args: TrainingArguments, state: TrainerState, control: TrainerControl):
control.should_log = False
control.should_evaluate = False
control.should_save = False
return self.call_event("on_step_begin", args, state, control)
def on_substep_end(self, args: TrainingArguments, state: TrainerState, control: TrainerControl):
return self.call_event("on_substep_end", args, state, control)
def on_step_end(self, args: TrainingArguments, state: TrainerState, control: TrainerControl):
return self.call_event("on_step_end", args, state, control)
def on_evaluate(self, args: TrainingArguments, state: TrainerState, control: TrainerControl, metrics):
control.should_evaluate = False
return self.call_event("on_evaluate", args, state, control, metrics=metrics)
def on_save(self, args: TrainingArguments, state: TrainerState, control: TrainerControl):
control.should_save = False
return self.call_event("on_save", args, state, control)
def on_log(self, args: TrainingArguments, state: TrainerState, control: TrainerControl, logs):
control.should_log = False
return self.call_event("on_log", args, state, control, logs=logs)
def on_prediction_step(self, args: TrainingArguments, state: TrainerState, control: TrainerControl):
return self.call_event("on_prediction_step", args, state, control)
def call_event(self, event, args, state, control, **kwargs):
for callback in self.callbacks:
result = getattr(callback, event)(
args,
state,
control,
model=self.model,
tokenizer=self.tokenizer,
optimizer=self.optimizer,
lr_scheduler=self.lr_scheduler,
train_dataloader=self.train_dataloader,
eval_dataloader=self.eval_dataloader,
**kwargs,
)
# A Callback can skip the return of `control` if it doesn't change it.
if result is not None:
control = result
return control
class DefaultFlowCallback(TrainerCallback):
"""
A [`TrainerCallback`] that handles the default flow of the training loop for logs, evaluation and checkpoints.
"""
def on_step_end(self, args: TrainingArguments, state: TrainerState, control: TrainerControl, **kwargs):
# Log
if state.global_step == 1 and args.logging_first_step:
control.should_log = True
if args.logging_strategy == IntervalStrategy.STEPS and state.global_step % args.logging_steps == 0:
control.should_log = True
# Evaluate
if args.evaluation_strategy == IntervalStrategy.STEPS and state.global_step % args.eval_steps == 0:
control.should_evaluate = True
# Save
if (
args.save_strategy == IntervalStrategy.STEPS
and args.save_steps > 0
and state.global_step % args.save_steps == 0
):
control.should_save = True
# End training
if state.global_step >= state.max_steps:
control.should_training_stop = True
return control
def on_epoch_end(self, args: TrainingArguments, state: TrainerState, control: TrainerControl, **kwargs):
# Log
if args.logging_strategy == IntervalStrategy.EPOCH:
control.should_log = True
# Evaluate
if args.evaluation_strategy == IntervalStrategy.EPOCH:
control.should_evaluate = True
# Save
if args.save_strategy == IntervalStrategy.EPOCH:
control.should_save = True
return control
class ProgressCallback(TrainerCallback):
"""
A [`TrainerCallback`] that displays the progress of training or evaluation.
"""
def __init__(self):
self.training_bar = None
self.prediction_bar = None
def on_train_begin(self, args, state, control, **kwargs):
if state.is_local_process_zero:
self.training_bar = tqdm(total=state.max_steps)
self.current_step = 0
def on_step_end(self, args, state, control, **kwargs):
if state.is_local_process_zero:
self.training_bar.update(state.global_step - self.current_step)
self.current_step = state.global_step
def on_prediction_step(self, args, state, control, eval_dataloader=None, **kwargs):
if state.is_local_process_zero and has_length(eval_dataloader.dataset):
if self.prediction_bar is None:
self.prediction_bar = tqdm(total=len(eval_dataloader), leave=self.training_bar is None)
self.prediction_bar.update(1)
def on_evaluate(self, args, state, control, **kwargs):
if state.is_local_process_zero:
if self.prediction_bar is not None:
self.prediction_bar.close()
self.prediction_bar = None
def on_log(self, args, state, control, logs=None, **kwargs):
if state.is_local_process_zero and self.training_bar is not None:
_ = logs.pop("total_flos", None)
self.training_bar.write(str(logs))
def on_train_end(self, args, state, control, **kwargs):
if state.is_local_process_zero:
self.training_bar.close()
self.training_bar = None
class PrinterCallback(TrainerCallback):
"""
A bare [`TrainerCallback`] that just prints the logs.
"""
def on_log(self, args, state, control, logs=None, **kwargs):
_ = logs.pop("total_flos", None)
if state.is_local_process_zero:
print(logs)
class EarlyStoppingCallback(TrainerCallback):
"""
A [`TrainerCallback`] that handles early stopping.
Args:
early_stopping_patience (`int`):
Use with `metric_for_best_model` to stop training when the specified metric worsens for
`early_stopping_patience` evaluation calls.
early_stopping_threshold(`float`, *optional*):
Use with TrainingArguments `metric_for_best_model` and `early_stopping_patience` to denote how much the
specified metric must improve to satisfy early stopping conditions. `
This callback depends on [`TrainingArguments`] argument *load_best_model_at_end* functionality to set best_metric
in [`TrainerState`].
"""
def __init__(self, early_stopping_patience: int = 1, early_stopping_threshold: Optional[float] = 0.0):
self.early_stopping_patience = early_stopping_patience
self.early_stopping_threshold = early_stopping_threshold
# early_stopping_patience_counter denotes the number of times validation metrics failed to improve.
self.early_stopping_patience_counter = 0
def check_metric_value(self, args, state, control, metric_value):
# best_metric is set by code for load_best_model
operator = np.greater if args.greater_is_better else np.less
if state.best_metric is None or (
operator(metric_value, state.best_metric)
and abs(metric_value - state.best_metric) > self.early_stopping_threshold
):
self.early_stopping_patience_counter = 0
else:
self.early_stopping_patience_counter += 1
def on_train_begin(self, args, state, control, **kwargs):
assert args.load_best_model_at_end, "EarlyStoppingCallback requires load_best_model_at_end = True"
assert (
args.metric_for_best_model is not None
), "EarlyStoppingCallback requires metric_for_best_model is defined"
assert (
args.evaluation_strategy != IntervalStrategy.NO
), "EarlyStoppingCallback requires IntervalStrategy of steps or epoch"
def on_evaluate(self, args, state, control, metrics, **kwargs):
metric_to_check = args.metric_for_best_model
if not metric_to_check.startswith("eval_"):
metric_to_check = f"eval_{metric_to_check}"
metric_value = metrics.get(metric_to_check)
if metric_value is None:
logger.warning(
f"early stopping required metric_for_best_model, but did not find {metric_to_check} so early stopping is disabled"
)
return
self.check_metric_value(args, state, control, metric_value)
if self.early_stopping_patience_counter >= self.early_stopping_patience:
control.should_training_stop = True
| 23,083 | 40.074733 | 130 | py |
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