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transformers | transformers-main/src/transformers/models/deprecated/bort/convert_bort_original_gluonnlp_checkpoint_to_pytorch.py | # coding=utf-8
# Copyright 2020, The HuggingFace Inc. team.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
"""Convert Bort checkpoint."""
import argparse
import os
import gluonnlp as nlp
import mxnet as mx
import numpy as np
import torch
from gluonnlp.base import get_home_dir
from gluonnlp.model.bert import BERTEncoder
from gluonnlp.model.utils import _load_vocab
from gluonnlp.vocab import Vocab
from packaging import version
from torch import nn
from transformers import BertConfig, BertForMaskedLM, BertModel, RobertaTokenizer
from transformers.models.bert.modeling_bert import (
BertIntermediate,
BertLayer,
BertOutput,
BertSelfAttention,
BertSelfOutput,
)
from transformers.utils import logging
if version.parse(nlp.__version__) != version.parse("0.8.3"):
raise Exception("requires gluonnlp == 0.8.3")
if version.parse(mx.__version__) != version.parse("1.5.0"):
raise Exception("requires mxnet == 1.5.0")
logging.set_verbosity_info()
logger = logging.get_logger(__name__)
SAMPLE_TEXT = "The Nymphenburg Palace is a beautiful palace in Munich!"
def convert_bort_checkpoint_to_pytorch(bort_checkpoint_path: str, pytorch_dump_folder_path: str):
"""
Convert the original Bort checkpoint (based on MXNET and Gluonnlp) to our BERT structure-
"""
# Original Bort configuration
bort_4_8_768_1024_hparams = {
"attention_cell": "multi_head",
"num_layers": 4,
"units": 1024,
"hidden_size": 768,
"max_length": 512,
"num_heads": 8,
"scaled": True,
"dropout": 0.1,
"use_residual": True,
"embed_size": 1024,
"embed_dropout": 0.1,
"word_embed": None,
"layer_norm_eps": 1e-5,
"token_type_vocab_size": 2,
}
predefined_args = bort_4_8_768_1024_hparams
# Let's construct the original Bort model here
# Taken from official BERT implementation, see:
# https://github.com/alexa/bort/blob/master/bort/bort.py
encoder = BERTEncoder(
attention_cell=predefined_args["attention_cell"],
num_layers=predefined_args["num_layers"],
units=predefined_args["units"],
hidden_size=predefined_args["hidden_size"],
max_length=predefined_args["max_length"],
num_heads=predefined_args["num_heads"],
scaled=predefined_args["scaled"],
dropout=predefined_args["dropout"],
output_attention=False,
output_all_encodings=False,
use_residual=predefined_args["use_residual"],
activation=predefined_args.get("activation", "gelu"),
layer_norm_eps=predefined_args.get("layer_norm_eps", None),
)
# Vocab information needs to be fetched first
# It's the same as RoBERTa, so RobertaTokenizer can be used later
vocab_name = "openwebtext_ccnews_stories_books_cased"
# Specify download folder to Gluonnlp's vocab
gluon_cache_dir = os.path.join(get_home_dir(), "models")
bort_vocab = _load_vocab(vocab_name, None, gluon_cache_dir, cls=Vocab)
original_bort = nlp.model.BERTModel(
encoder,
len(bort_vocab),
units=predefined_args["units"],
embed_size=predefined_args["embed_size"],
embed_dropout=predefined_args["embed_dropout"],
word_embed=predefined_args["word_embed"],
use_pooler=False,
use_token_type_embed=False,
token_type_vocab_size=predefined_args["token_type_vocab_size"],
use_classifier=False,
use_decoder=False,
)
original_bort.load_parameters(bort_checkpoint_path, cast_dtype=True, ignore_extra=True)
params = original_bort._collect_params_with_prefix()
# Build our config 🤗
hf_bort_config_json = {
"architectures": ["BertForMaskedLM"],
"attention_probs_dropout_prob": predefined_args["dropout"],
"hidden_act": "gelu",
"hidden_dropout_prob": predefined_args["dropout"],
"hidden_size": predefined_args["embed_size"],
"initializer_range": 0.02,
"intermediate_size": predefined_args["hidden_size"],
"layer_norm_eps": predefined_args["layer_norm_eps"],
"max_position_embeddings": predefined_args["max_length"],
"model_type": "bort",
"num_attention_heads": predefined_args["num_heads"],
"num_hidden_layers": predefined_args["num_layers"],
"pad_token_id": 1, # 2 = BERT, 1 = RoBERTa
"type_vocab_size": 1, # 2 = BERT, 1 = RoBERTa
"vocab_size": len(bort_vocab),
}
hf_bort_config = BertConfig.from_dict(hf_bort_config_json)
hf_bort_model = BertForMaskedLM(hf_bort_config)
hf_bort_model.eval()
# Parameter mapping table (Gluonnlp to Transformers)
# * denotes layer index
#
# | Gluon Parameter | Transformers Parameter
# | -------------------------------------------------------------- | ----------------------
# | `encoder.layer_norm.beta` | `bert.embeddings.LayerNorm.bias`
# | `encoder.layer_norm.gamma` | `bert.embeddings.LayerNorm.weight`
# | `encoder.position_weight` | `bert.embeddings.position_embeddings.weight`
# | `word_embed.0.weight` | `bert.embeddings.word_embeddings.weight`
# | `encoder.transformer_cells.*.attention_cell.proj_key.bias` | `bert.encoder.layer.*.attention.self.key.bias`
# | `encoder.transformer_cells.*.attention_cell.proj_key.weight` | `bert.encoder.layer.*.attention.self.key.weight`
# | `encoder.transformer_cells.*.attention_cell.proj_query.bias` | `bert.encoder.layer.*.attention.self.query.bias`
# | `encoder.transformer_cells.*.attention_cell.proj_query.weight` | `bert.encoder.layer.*.attention.self.query.weight`
# | `encoder.transformer_cells.*.attention_cell.proj_value.bias` | `bert.encoder.layer.*.attention.self.value.bias`
# | `encoder.transformer_cells.*.attention_cell.proj_value.weight` | `bert.encoder.layer.*.attention.self.value.weight`
# | `encoder.transformer_cells.*.ffn.ffn_2.bias` | `bert.encoder.layer.*.attention.output.dense.bias`
# | `encoder.transformer_cells.*.ffn.ffn_2.weight` | `bert.encoder.layer.*.attention.output.dense.weight`
# | `encoder.transformer_cells.*.layer_norm.beta` | `bert.encoder.layer.*.attention.output.LayerNorm.bias`
# | `encoder.transformer_cells.*.layer_norm.gamma` | `bert.encoder.layer.*.attention.output.LayerNorm.weight`
# | `encoder.transformer_cells.*.ffn.ffn_1.bias` | `bert.encoder.layer.*.intermediate.dense.bias`
# | `encoder.transformer_cells.*.ffn.ffn_1.weight` | `bert.encoder.layer.*.intermediate.dense.weight`
# | `encoder.transformer_cells.*.ffn.layer_norm.beta` | `bert.encoder.layer.*.output.LayerNorm.bias`
# | `encoder.transformer_cells.*.ffn.layer_norm.gamma` | `bert.encoder.layer.*.output.LayerNorm.weight`
# | `encoder.transformer_cells.*.proj.bias` | `bert.encoder.layer.*.output.dense.bias`
# | `encoder.transformer_cells.*.proj.weight` | `bert.encoder.layer.*.output.dense.weight`
# Helper function to convert MXNET Arrays to PyTorch
def to_torch(mx_array) -> nn.Parameter:
return nn.Parameter(torch.FloatTensor(mx_array.data().asnumpy()))
# Check param shapes and map new HF param back
def check_and_map_params(hf_param, gluon_param):
shape_hf = hf_param.shape
gluon_param = to_torch(params[gluon_param])
shape_gluon = gluon_param.shape
assert (
shape_hf == shape_gluon
), f"The gluon parameter {gluon_param} has shape {shape_gluon}, but expects shape {shape_hf} for Transformers"
return gluon_param
hf_bort_model.bert.embeddings.word_embeddings.weight = check_and_map_params(
hf_bort_model.bert.embeddings.word_embeddings.weight, "word_embed.0.weight"
)
hf_bort_model.bert.embeddings.position_embeddings.weight = check_and_map_params(
hf_bort_model.bert.embeddings.position_embeddings.weight, "encoder.position_weight"
)
hf_bort_model.bert.embeddings.LayerNorm.bias = check_and_map_params(
hf_bort_model.bert.embeddings.LayerNorm.bias, "encoder.layer_norm.beta"
)
hf_bort_model.bert.embeddings.LayerNorm.weight = check_and_map_params(
hf_bort_model.bert.embeddings.LayerNorm.weight, "encoder.layer_norm.gamma"
)
# Inspired by RoBERTa conversion script, we just zero them out (Bort does not use them)
hf_bort_model.bert.embeddings.token_type_embeddings.weight.data = torch.zeros_like(
hf_bort_model.bert.embeddings.token_type_embeddings.weight.data
)
for i in range(hf_bort_config.num_hidden_layers):
layer: BertLayer = hf_bort_model.bert.encoder.layer[i]
# self attention
self_attn: BertSelfAttention = layer.attention.self
self_attn.key.bias.data = check_and_map_params(
self_attn.key.bias.data, f"encoder.transformer_cells.{i}.attention_cell.proj_key.bias"
)
self_attn.key.weight.data = check_and_map_params(
self_attn.key.weight.data, f"encoder.transformer_cells.{i}.attention_cell.proj_key.weight"
)
self_attn.query.bias.data = check_and_map_params(
self_attn.query.bias.data, f"encoder.transformer_cells.{i}.attention_cell.proj_query.bias"
)
self_attn.query.weight.data = check_and_map_params(
self_attn.query.weight.data, f"encoder.transformer_cells.{i}.attention_cell.proj_query.weight"
)
self_attn.value.bias.data = check_and_map_params(
self_attn.value.bias.data, f"encoder.transformer_cells.{i}.attention_cell.proj_value.bias"
)
self_attn.value.weight.data = check_and_map_params(
self_attn.value.weight.data, f"encoder.transformer_cells.{i}.attention_cell.proj_value.weight"
)
# self attention output
self_output: BertSelfOutput = layer.attention.output
self_output.dense.bias = check_and_map_params(
self_output.dense.bias, f"encoder.transformer_cells.{i}.proj.bias"
)
self_output.dense.weight = check_and_map_params(
self_output.dense.weight, f"encoder.transformer_cells.{i}.proj.weight"
)
self_output.LayerNorm.bias = check_and_map_params(
self_output.LayerNorm.bias, f"encoder.transformer_cells.{i}.layer_norm.beta"
)
self_output.LayerNorm.weight = check_and_map_params(
self_output.LayerNorm.weight, f"encoder.transformer_cells.{i}.layer_norm.gamma"
)
# intermediate
intermediate: BertIntermediate = layer.intermediate
intermediate.dense.bias = check_and_map_params(
intermediate.dense.bias, f"encoder.transformer_cells.{i}.ffn.ffn_1.bias"
)
intermediate.dense.weight = check_and_map_params(
intermediate.dense.weight, f"encoder.transformer_cells.{i}.ffn.ffn_1.weight"
)
# output
bert_output: BertOutput = layer.output
bert_output.dense.bias = check_and_map_params(
bert_output.dense.bias, f"encoder.transformer_cells.{i}.ffn.ffn_2.bias"
)
bert_output.dense.weight = check_and_map_params(
bert_output.dense.weight, f"encoder.transformer_cells.{i}.ffn.ffn_2.weight"
)
bert_output.LayerNorm.bias = check_and_map_params(
bert_output.LayerNorm.bias, f"encoder.transformer_cells.{i}.ffn.layer_norm.beta"
)
bert_output.LayerNorm.weight = check_and_map_params(
bert_output.LayerNorm.weight, f"encoder.transformer_cells.{i}.ffn.layer_norm.gamma"
)
# Save space and energy 🎄
hf_bort_model.half()
# Compare output of both models
tokenizer = RobertaTokenizer.from_pretrained("roberta-base")
input_ids = tokenizer.encode_plus(SAMPLE_TEXT)["input_ids"]
# Get gluon output
gluon_input_ids = mx.nd.array([input_ids])
output_gluon = original_bort(inputs=gluon_input_ids, token_types=[])
# Get Transformer output (save and reload model again)
hf_bort_model.save_pretrained(pytorch_dump_folder_path)
hf_bort_model = BertModel.from_pretrained(pytorch_dump_folder_path)
hf_bort_model.eval()
input_ids = tokenizer.encode_plus(SAMPLE_TEXT, return_tensors="pt")
output_hf = hf_bort_model(**input_ids)[0]
gluon_layer = output_gluon[0].asnumpy()
hf_layer = output_hf[0].detach().numpy()
max_absolute_diff = np.max(np.abs(hf_layer - gluon_layer)).item()
success = np.allclose(gluon_layer, hf_layer, atol=1e-3)
if success:
print("✔️ Both model do output the same tensors")
else:
print("❌ Both model do **NOT** output the same tensors")
print("Absolute difference is:", max_absolute_diff)
if __name__ == "__main__":
parser = argparse.ArgumentParser()
# Required parameters
parser.add_argument(
"--bort_checkpoint_path", default=None, type=str, required=True, help="Path the official Bort params file."
)
parser.add_argument(
"--pytorch_dump_folder_path", default=None, type=str, required=True, help="Path to the output PyTorch model."
)
args = parser.parse_args()
convert_bort_checkpoint_to_pytorch(args.bort_checkpoint_path, args.pytorch_dump_folder_path)
| 14,045 | 42.89375 | 129 | py |
transformers | transformers-main/src/transformers/models/deprecated/mmbt/modeling_mmbt.py | # coding=utf-8
# Copyright (c) Facebook, Inc. and its affiliates.
# Copyright (c) HuggingFace Inc. team.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
"""PyTorch MMBT model."""
import torch
from torch import nn
from torch.nn import CrossEntropyLoss, MSELoss
from ....modeling_outputs import BaseModelOutputWithPooling, SequenceClassifierOutput
from ....modeling_utils import ModuleUtilsMixin
from ....utils import add_start_docstrings, add_start_docstrings_to_model_forward, logging, replace_return_docstrings
logger = logging.get_logger(__name__)
_CONFIG_FOR_DOC = "MMBTConfig"
class ModalEmbeddings(nn.Module):
"""Generic Modal Embeddings which takes in an encoder, and a transformer embedding."""
def __init__(self, config, encoder, embeddings):
super().__init__()
self.config = config
self.encoder = encoder
self.proj_embeddings = nn.Linear(config.modal_hidden_size, config.hidden_size)
self.position_embeddings = embeddings.position_embeddings
self.token_type_embeddings = embeddings.token_type_embeddings
self.word_embeddings = embeddings.word_embeddings
self.LayerNorm = embeddings.LayerNorm
self.dropout = nn.Dropout(p=config.hidden_dropout_prob)
def forward(self, input_modal, start_token=None, end_token=None, position_ids=None, token_type_ids=None):
token_embeddings = self.proj_embeddings(self.encoder(input_modal))
seq_length = token_embeddings.size(1)
if start_token is not None:
start_token_embeds = self.word_embeddings(start_token)
seq_length += 1
token_embeddings = torch.cat([start_token_embeds.unsqueeze(1), token_embeddings], dim=1)
if end_token is not None:
end_token_embeds = self.word_embeddings(end_token)
seq_length += 1
token_embeddings = torch.cat([token_embeddings, end_token_embeds.unsqueeze(1)], dim=1)
if position_ids is None:
position_ids = torch.arange(seq_length, dtype=torch.long, device=input_modal.device)
position_ids = position_ids.unsqueeze(0).expand(input_modal.size(0), seq_length)
if token_type_ids is None:
token_type_ids = torch.zeros(
(input_modal.size(0), seq_length), dtype=torch.long, device=input_modal.device
)
position_embeddings = self.position_embeddings(position_ids)
token_type_embeddings = self.token_type_embeddings(token_type_ids)
embeddings = token_embeddings + position_embeddings + token_type_embeddings
embeddings = self.LayerNorm(embeddings)
embeddings = self.dropout(embeddings)
return embeddings
MMBT_START_DOCSTRING = r"""
MMBT model was proposed in [Supervised Multimodal Bitransformers for Classifying Images and
Text](https://github.com/facebookresearch/mmbt) by Douwe Kiela, Suvrat Bhooshan, Hamed Firooz, Davide Testuggine.
It's a supervised multimodal bitransformer model that fuses information from text and other image encoders, and
obtain state-of-the-art performance on various multimodal classification benchmark tasks.
This model inherits from [`PreTrainedModel`]. Check the superclass documentation for the generic methods the
library implements for all its model (such as downloading or saving, resizing the input embeddings, pruning heads
etc.)
This model is also a PyTorch [torch.nn.Module](https://pytorch.org/docs/stable/nn.html#torch.nn.Module) subclass.
Use it as a regular PyTorch Module and refer to the PyTorch documentation for all matter related to general usage
and behavior.
Parameters:
config ([`MMBTConfig`]): Model configuration class with all the parameters of the model.
Initializing with a config file does not load the weights associated with the model, only the
configuration.
transformer (`nn.Module`): A text transformer that is used by MMBT.
It should have embeddings, encoder, and pooler attributes.
encoder (`nn.Module`): Encoder for the second modality.
It should take in a batch of modal inputs and return k, n dimension embeddings.
"""
MMBT_INPUTS_DOCSTRING = r"""
Args:
input_modal (`torch.FloatTensor` of shape `(batch_size, ***)`):
The other modality data. It will be the shape that the encoder for that type expects. e.g. With an Image
Encoder, the shape would be (batch_size, channels, height, width)
input_ids (`torch.LongTensor` of shape `(batch_size, sequence_length)`):
Indices of input sequence tokens in the vocabulary. It does not expect [CLS] token to be added as it's
appended to the end of other modality embeddings. Indices can be obtained using [`AutoTokenizer`]. See
[`PreTrainedTokenizer.encode`] and [`PreTrainedTokenizer.__call__`] for details.
[What are input IDs?](../glossary#input-ids)
modal_start_tokens (`torch.LongTensor` of shape `(batch_size,)`, *optional*):
Optional start token to be added to Other Modality Embedding. [CLS] Most commonly used for classification
tasks.
modal_end_tokens (`torch.LongTensor` of shape `(batch_size,)`, *optional*):
Optional end token to be added to Other Modality Embedding. [SEP] Most commonly used.
attention_mask (*optional*) `torch.FloatTensor` of shape `(batch_size, sequence_length)`:
Mask to avoid performing attention on padding token indices. Mask values selected in `[0, 1]`:
- 1 for tokens that are **not masked**,
- 0 for tokens that are **masked**.
[What are attention masks?](../glossary#attention-mask)
token_type_ids (*optional*) `torch.LongTensor` of shape `(batch_size, sequence_length)`:
Segment token indices to indicate first and second portions of the inputs. Indices are selected in `[0,
1]`:
- 0 corresponds to a *sentence A* token,
- 1 corresponds to a *sentence B* token.
[What are token type IDs?](../glossary#token-type-ids)
modal_token_type_ids (*optional*) `torch.LongTensor` of shape `(batch_size, modal_sequence_length)`:
Segment token indices to indicate different portions of the non-text modality. The embeddings from these
tokens will be summed with the respective token embeddings for the non-text modality.
position_ids (`torch.LongTensor` of shape `(batch_size, sequence_length)`, *optional*):
Indices of positions of each input sequence tokens in the position embeddings. Selected in the range `[0,
config.max_position_embeddings - 1]`.
[What are position IDs?](../glossary#position-ids)
modal_position_ids (`torch.LongTensor` of shape `(batch_size, modal_sequence_length)`, *optional*):
Indices of positions of each input sequence tokens in the position embeddings for the non-text modality.
Selected in the range `[0, config.max_position_embeddings - 1]`.
[What are position IDs?](../glossary#position-ids)
head_mask (`torch.FloatTensor` of shape `(num_heads,)` or `(num_layers, num_heads)`, *optional*):
Mask to nullify selected heads of the self-attention modules. Mask values selected in `[0, 1]`:
- 1 indicates the head is **not masked**,
- 0 indicates the head is **masked**.
inputs_embeds (`torch.FloatTensor` of shape `(batch_size, sequence_length, embedding_dim)`, *optional*):
Optionally, instead of passing `input_ids` you can choose to directly pass an embedded representation. This
is useful if you want more control over how to convert `input_ids` indices into associated vectors than the
model's internal embedding lookup matrix.
encoder_hidden_states (`torch.FloatTensor` of shape `(batch_size, sequence_length, hidden_size)`, *optional*):
Sequence of hidden-states at the output of the last layer of the encoder. Used in the cross-attention if
the model is configured as a decoder.
encoder_attention_mask (`torch.FloatTensor` of shape `(batch_size, sequence_length)`, *optional*):
Mask to avoid performing attention on the padding token indices of the encoder input. This mask is used in
the cross-attention if the model is configured as a decoder. Mask values selected in `[0, 1]`:
- 1 for tokens that are **not masked**,
- 0 for tokens that are **masked**.
output_attentions (`bool`, *optional*):
Whether or not to return the attentions tensors of all attention layers. See `attentions` under returned
tensors for more detail.
output_hidden_states (`bool`, *optional*):
Whether or not to return the hidden states of all layers. See `hidden_states` under returned tensors for
more detail.
return_dict (`bool`, *optional*):
Whether or not to return a [`~utils.ModelOutput`] instead of a plain tuple.
"""
@add_start_docstrings(
"The bare MMBT Model outputting raw hidden-states without any specific head on top.",
MMBT_START_DOCSTRING,
)
class MMBTModel(nn.Module, ModuleUtilsMixin):
def __init__(self, config, transformer, encoder):
super().__init__()
self.config = config
self.transformer = transformer
self.modal_encoder = ModalEmbeddings(config, encoder, transformer.embeddings)
@add_start_docstrings_to_model_forward(MMBT_INPUTS_DOCSTRING)
@replace_return_docstrings(output_type=BaseModelOutputWithPooling, config_class=_CONFIG_FOR_DOC)
def forward(
self,
input_modal,
input_ids=None,
modal_start_tokens=None,
modal_end_tokens=None,
attention_mask=None,
token_type_ids=None,
modal_token_type_ids=None,
position_ids=None,
modal_position_ids=None,
head_mask=None,
inputs_embeds=None,
encoder_hidden_states=None,
encoder_attention_mask=None,
output_attentions=None,
output_hidden_states=None,
return_dict=None,
):
r"""
Returns:
Examples:
```python
# For example purposes. Not runnable.
transformer = BertModel.from_pretrained("bert-base-uncased")
encoder = ImageEncoder(args)
mmbt = MMBTModel(config, transformer, encoder)
```"""
output_attentions = output_attentions if output_attentions is not None else self.config.output_attentions
output_hidden_states = (
output_hidden_states if output_hidden_states is not None else self.config.output_hidden_states
)
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
if input_ids is not None and inputs_embeds is not None:
raise ValueError("You cannot specify both input_ids and inputs_embeds at the same time")
elif input_ids is not None:
input_txt_shape = input_ids.size()
elif inputs_embeds is not None:
input_txt_shape = inputs_embeds.size()[:-1]
else:
raise ValueError("You have to specify either input_ids or inputs_embeds")
device = input_ids.device if input_ids is not None else inputs_embeds.device
modal_embeddings = self.modal_encoder(
input_modal,
start_token=modal_start_tokens,
end_token=modal_end_tokens,
position_ids=modal_position_ids,
token_type_ids=modal_token_type_ids,
)
input_modal_shape = modal_embeddings.size()[:-1]
if token_type_ids is None:
token_type_ids = torch.ones(input_txt_shape, dtype=torch.long, device=device)
txt_embeddings = self.transformer.embeddings(
input_ids=input_ids, position_ids=position_ids, token_type_ids=token_type_ids, inputs_embeds=inputs_embeds
)
embedding_output = torch.cat([modal_embeddings, txt_embeddings], 1)
input_shape = embedding_output.size()[:-1]
if attention_mask is None:
attention_mask = torch.ones(input_shape, device=device)
else:
attention_mask = torch.cat(
[torch.ones(input_modal_shape, device=device, dtype=torch.long), attention_mask], dim=1
)
if encoder_attention_mask is None:
encoder_attention_mask = torch.ones(input_shape, device=device)
else:
encoder_attention_mask = torch.cat(
[torch.ones(input_modal_shape, device=device), encoder_attention_mask], dim=1
)
extended_attention_mask = self.get_extended_attention_mask(attention_mask, input_shape)
encoder_extended_attention_mask = self.invert_attention_mask(encoder_attention_mask)
head_mask = self.get_head_mask(head_mask, self.config.num_hidden_layers)
encoder_outputs = self.transformer.encoder(
embedding_output,
attention_mask=extended_attention_mask,
head_mask=head_mask,
encoder_hidden_states=encoder_hidden_states,
encoder_attention_mask=encoder_extended_attention_mask,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
sequence_output = encoder_outputs[0]
pooled_output = self.transformer.pooler(sequence_output)
if not return_dict:
return (sequence_output, pooled_output) + encoder_outputs[1:]
return BaseModelOutputWithPooling(
last_hidden_state=sequence_output,
pooler_output=pooled_output,
hidden_states=encoder_outputs.hidden_states,
attentions=encoder_outputs.attentions,
)
def get_input_embeddings(self):
return self.embeddings.word_embeddings
def set_input_embeddings(self, value):
self.embeddings.word_embeddings = value
@add_start_docstrings(
"""
MMBT Model with a sequence classification/regression head on top (a linear layer on top of the pooled output)
""",
MMBT_START_DOCSTRING,
MMBT_INPUTS_DOCSTRING,
)
class MMBTForClassification(nn.Module):
r"""
**labels**: (*optional*) `torch.LongTensor` of shape `(batch_size,)`:
Labels for computing the sequence classification/regression loss. Indices should be in `[0, ...,
config.num_labels - 1]`. If `config.num_labels == 1` a regression loss is computed (Mean-Square loss), If
`config.num_labels > 1` a classification loss is computed (Cross-Entropy).
Returns: *Tuple* comprising various elements depending on the configuration (config) and inputs: **loss**:
(*optional*, returned when `labels` is provided) `torch.FloatTensor` of shape `(1,)`: Classification (or
regression if config.num_labels==1) loss. **logits**:
`torch.FloatTensor` of shape `(batch_size, config.num_labels)` Classification (or regression if
config.num_labels==1) scores (before SoftMax).
**hidden_states**: (*optional*, returned when `output_hidden_states=True`) list of `torch.FloatTensor` (one for
the output of each layer + the output of the embeddings) of shape `(batch_size, sequence_length, hidden_size)`:
Hidden-states of the model at the output of each layer plus the initial embedding outputs. **attentions**:
(*optional*, returned when `output_attentions=True`) list of `torch.FloatTensor` (one for each layer) of shape
`(batch_size, num_heads, sequence_length, sequence_length)`: Attentions weights after the attention softmax, used
to compute the weighted average in the self-attention heads.
Examples:
```python
# For example purposes. Not runnable.
transformer = BertModel.from_pretrained("bert-base-uncased")
encoder = ImageEncoder(args)
model = MMBTForClassification(config, transformer, encoder)
outputs = model(input_modal, input_ids, labels=labels)
loss, logits = outputs[:2]
```"""
def __init__(self, config, transformer, encoder):
super().__init__()
self.num_labels = config.num_labels
self.mmbt = MMBTModel(config, transformer, encoder)
self.dropout = nn.Dropout(config.hidden_dropout_prob)
self.classifier = nn.Linear(config.hidden_size, config.num_labels)
def forward(
self,
input_modal,
input_ids=None,
modal_start_tokens=None,
modal_end_tokens=None,
attention_mask=None,
token_type_ids=None,
modal_token_type_ids=None,
position_ids=None,
modal_position_ids=None,
head_mask=None,
inputs_embeds=None,
labels=None,
return_dict=None,
):
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
outputs = self.mmbt(
input_modal=input_modal,
input_ids=input_ids,
modal_start_tokens=modal_start_tokens,
modal_end_tokens=modal_end_tokens,
attention_mask=attention_mask,
token_type_ids=token_type_ids,
modal_token_type_ids=modal_token_type_ids,
position_ids=position_ids,
modal_position_ids=modal_position_ids,
head_mask=head_mask,
inputs_embeds=inputs_embeds,
return_dict=return_dict,
)
pooled_output = outputs[1]
pooled_output = self.dropout(pooled_output)
logits = self.classifier(pooled_output)
loss = None
if labels is not None:
if self.num_labels == 1:
# We are doing regression
loss_fct = MSELoss()
loss = loss_fct(logits.view(-1), labels.view(-1))
else:
loss_fct = CrossEntropyLoss()
loss = loss_fct(logits.view(-1, self.num_labels), labels.view(-1))
if not return_dict:
output = (logits,) + outputs[2:]
return ((loss,) + output) if loss is not None else output
return SequenceClassifierOutput(
loss=loss,
logits=logits,
hidden_states=outputs.hidden_states,
attentions=outputs.attentions,
)
| 18,890 | 45.188264 | 119 | py |
transformers | transformers-main/src/transformers/models/deprecated/mmbt/__init__.py | # Copyright 2020 The HuggingFace Team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
from typing import TYPE_CHECKING
from ....utils import OptionalDependencyNotAvailable, _LazyModule, is_torch_available
_import_structure = {"configuration_mmbt": ["MMBTConfig"]}
try:
if not is_torch_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
_import_structure["modeling_mmbt"] = ["MMBTForClassification", "MMBTModel", "ModalEmbeddings"]
if TYPE_CHECKING:
from .configuration_mmbt import MMBTConfig
try:
if not is_torch_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
from .modeling_mmbt import MMBTForClassification, MMBTModel, ModalEmbeddings
else:
import sys
sys.modules[__name__] = _LazyModule(__name__, globals()["__file__"], _import_structure, module_spec=__spec__)
| 1,480 | 31.195652 | 113 | py |
transformers | transformers-main/src/transformers/models/deprecated/tapex/tokenization_tapex.py | # coding=utf-8
# Copyright 2022 Microsoft Research and The HuggingFace Inc. team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
"""Tokenization classes for TAPEX."""
import json
import os
import random
from functools import lru_cache
from typing import Dict, List, Optional, Tuple, Union
import regex as re
from ....file_utils import ExplicitEnum, PaddingStrategy, TensorType, add_end_docstrings, is_pandas_available
from ....tokenization_utils import AddedToken, PreTrainedTokenizer
from ....tokenization_utils_base import ENCODE_KWARGS_DOCSTRING, BatchEncoding, TextInput, TruncationStrategy
from ....utils import logging
if is_pandas_available():
import pandas as pd
logger = logging.get_logger(__name__)
VOCAB_FILES_NAMES = {"vocab_file": "vocab.json", "merges_file": "merges.txt"}
PRETRAINED_VOCAB_FILES_MAP = {
"vocab_file": {
"microsoft/tapex-base": "https://huggingface.co/microsoft/tapex-base/resolve/main/vocab.json",
},
"merges_file": {
"microsoft/tapex-base": "https://huggingface.co/microsoft/tapex-base/resolve/main/merges.txt",
},
}
PRETRAINED_POSITIONAL_EMBEDDINGS_SIZES = {
"microsoft/tapex-base": 512,
}
PRETRAINED_INIT_CONFIGURATION = {
"microsoft/tapex-base": {"do_lower_case": True},
}
class TapexTruncationStrategy(ExplicitEnum):
"""
Possible values for the `truncation` argument in [`~TapasTokenizer.__call__`]. Useful for tab-completion in an IDE.
"""
DROP_ROWS_TO_FIT = "drop_rows_to_fit"
TAPEX_ENCODE_PLUS_ADDITIONAL_KWARGS_DOCSTRING = r"""
add_special_tokens (`bool`, *optional*, defaults to `True`):
Whether or not to encode the sequences with the special tokens relative to their model.
padding (`bool`, `str` or [`~file_utils.PaddingStrategy`], *optional*, defaults to `False`):
Activates and controls padding. Accepts the following values:
- `True` or `'longest'`: Pad to the longest sequence in the batch (or no padding if only a single
sequence if provided).
- `'max_length'`: Pad to a maximum length specified with the argument `max_length` or to the maximum
acceptable input length for the model if that argument is not provided.
- `False` or `'do_not_pad'` (default): No padding (i.e., can output a batch with sequences of different
lengths).
truncation (`bool`, `str`, [`TapexTruncationStrategy`] or [`~tokenization_utils_base.TruncationStrategy`],
*optional*, defaults to `False`):
Activates and controls truncation. Accepts the following values:
- `'drop_rows_to_fit'`: Truncate to a maximum length specified with the argument `max_length` or to the
maximum acceptable input length for the model if that argument is not provided. This will truncate
row by row, removing rows from the table.
- `True` or `'longest_first'`: Truncate to a maximum length specified with the argument `max_length` or
to the maximum acceptable input length for the model if that argument is not provided. This will
truncate token by token, removing a token from the longest sequence in the pair if a pair of
sequences (or a batch of pairs) is provided.
- `'only_first'`: Truncate to a maximum length specified with the argument `max_length` or to the
maximum acceptable input length for the model if that argument is not provided. This will only
truncate the first sequence of a pair if a pair of sequences (or a batch of pairs) is provided.
- `'only_second'`: Truncate to a maximum length specified with the argument `max_length` or to the
maximum acceptable input length for the model if that argument is not provided. This will only
truncate the second sequence of a pair if a pair of sequences (or a batch of pairs) is provided.
- `False` or `'do_not_truncate'` (default): No truncation (i.e., can output batch with sequence lengths
greater than the model maximum admissible input size).
max_length (`int`, *optional*):
Controls the maximum length to use by one of the truncation/padding parameters. If left unset or set to
`None`, this will use the predefined model maximum length if a maximum length is required by one of the
truncation/padding parameters. If the model has no specific maximum input length (like XLNet)
truncation/padding to a maximum length will be deactivated.
stride (`int`, *optional*, defaults to 0):
If set to a number along with `max_length`, the overflowing tokens returned when
`return_overflowing_tokens=True` will contain some tokens from the end of the truncated sequence
returned to provide some overlap between truncated and overflowing sequences. The value of this
argument defines the number of overlapping tokens.
pad_to_multiple_of (`int`, *optional*):
If set will pad the sequence to a multiple of the provided value. This is especially useful to enable
the use of Tensor Cores on NVIDIA hardware with compute capability `>= 7.5` (Volta).
return_tensors (`str` or [`~file_utils.TensorType`], *optional*):
If set, will return tensors instead of list of python integers. Acceptable values are:
- `'tf'`: Return TensorFlow `tf.constant` objects.
- `'pt'`: Return PyTorch `torch.Tensor` objects.
- `'np'`: Return Numpy `np.ndarray` objects.
"""
@lru_cache()
def bytes_to_unicode():
"""
Returns list of utf-8 byte and a mapping to unicode strings. We specifically avoids mapping to whitespace/control
characters the bpe code barfs on. The reversible bpe codes work on unicode strings. This means you need a large #
of unicode characters in your vocab if you want to avoid UNKs. When you're at something like a 10B token dataset
you end up needing around 5K for decent coverage. This is a significant percentage of your normal, say, 32K bpe
vocab. To avoid that, we want lookup tables between utf-8 bytes and unicode strings.
"""
bs = (
list(range(ord("!"), ord("~") + 1)) + list(range(ord("¡"), ord("¬") + 1)) + list(range(ord("®"), ord("ÿ") + 1))
)
cs = bs[:]
n = 0
for b in range(2**8):
if b not in bs:
bs.append(b)
cs.append(2**8 + n)
n += 1
cs = [chr(n) for n in cs]
return dict(zip(bs, cs))
def get_pairs(word):
"""
Return set of symbol pairs in a word. Word is represented as tuple of symbols (symbols being variable-length
strings).
"""
pairs = set()
prev_char = word[0]
for char in word[1:]:
pairs.add((prev_char, char))
prev_char = char
return pairs
class IndexedRowTableLinearize:
"""
FORMAT: col: col1 | col2 | col 3 row 1 : val1 | val2 | val3 row 2 : ...
"""
def process_table(self, table_content: Dict):
"""
Given a table, TableLinearize aims at converting it into a flatten sequence with special symbols.
"""
assert "header" in table_content and "rows" in table_content, self.PROMPT_MESSAGE
# process header
table_str = self.process_header(table_content["header"]) + " "
# process rows
for i, row_example in enumerate(table_content["rows"]):
# NOTE: the row should start from row 1 instead of 0
table_str += self.process_row(row_example, row_index=i + 1) + " "
return table_str.strip()
def process_header(self, headers: List):
"""
Given a list of headers, TableLinearize aims at converting it into a flatten sequence with special symbols.
"""
return "col : " + " | ".join(headers)
def process_row(self, row: List, row_index: int):
"""
Given a row, TableLinearize aims at converting it into a flatten sequence with special symbols.
"""
row_str = ""
row_cell_values = []
for cell_value in row:
if isinstance(cell_value, int):
row_cell_values.append(str(cell_value))
else:
row_cell_values.append(cell_value)
row_str += " | ".join(row_cell_values)
return "row " + str(row_index) + " : " + row_str
class TapexTokenizer(PreTrainedTokenizer):
r"""
Construct a TAPEX tokenizer. Based on byte-level Byte-Pair-Encoding (BPE).
This tokenizer can be used to flatten one or more table(s) and concatenate them with one or more related sentences
to be used by TAPEX models. The format that the TAPEX tokenizer creates is the following:
sentence col: col1 | col2 | col 3 row 1 : val1 | val2 | val3 row 2 : ...
The tokenizer supports a single table + single query, a single table and multiple queries (in which case the table
will be duplicated for every query), a single query and multiple tables (in which case the query will be duplicated
for every table), and multiple tables and queries. In other words, you can provide a batch of tables + questions to
the tokenizer for instance to prepare them for the model.
Tokenization itself is based on the BPE algorithm. It is identical to the one used by BART, RoBERTa and GPT-2.
This tokenizer inherits from [`PreTrainedTokenizer`] which contains most of the main methods. Users should refer to
this superclass for more information regarding those methods.
Args:
vocab_file (`str`):
Path to the vocabulary file.
merges_file (`str`):
Path to the merges file.
do_lower_case (`bool`, *optional*, defaults to `True`):
Whether or not to lowercase the input when tokenizing.
errors (`str`, *optional*, defaults to `"replace"`):
Paradigm to follow when decoding bytes to UTF-8. See
[bytes.decode](https://docs.python.org/3/library/stdtypes.html#bytes.decode) for more information.
bos_token (`str`, *optional*, defaults to `"<s>"`):
The beginning of sequence token that was used during pretraining. Can be used a sequence classifier token.
<Tip>
When building a sequence using special tokens, this is not the token that is used for the beginning of
sequence. The token used is the `cls_token`.
</Tip>
eos_token (`str`, *optional*, defaults to `"</s>"`):
The end of sequence token.
<Tip>
When building a sequence using special tokens, this is not the token that is used for the end of sequence.
The token used is the `sep_token`.
</Tip>
sep_token (`str`, *optional*, defaults to `"</s>"`):
The separator token, which is used when building a sequence from multiple sequences, e.g. two sequences for
sequence classification or for a text and a question for question answering. It is also used as the last
token of a sequence built with special tokens.
cls_token (`str`, *optional*, defaults to `"<s>"`):
The classifier token which is used when doing sequence classification (classification of the whole sequence
instead of per-token classification). It is the first token of the sequence when built with special tokens.
unk_token (`str`, *optional*, defaults to `"<unk>"`):
The unknown token. A token that is not in the vocabulary cannot be converted to an ID and is set to be this
token instead.
pad_token (`str`, *optional*, defaults to `"<pad>"`):
The token used for padding, for example when batching sequences of different lengths.
mask_token (`str`, *optional*, defaults to `"<mask>"`):
The token used for masking values. This is the token used when training this model with masked language
modeling. This is the token which the model will try to predict.
add_prefix_space (`bool`, *optional*, defaults to `False`):
Whether or not to add an initial space to the input. This allows to treat the leading word just as any
other word. (BART tokenizer detect beginning of words by the preceding space).
max_cell_length (`int`, *optional*, defaults to 15):
Maximum number of characters per cell when linearizing a table. If this number is exceeded, truncation
takes place.
"""
vocab_files_names = VOCAB_FILES_NAMES
pretrained_vocab_files_map = PRETRAINED_VOCAB_FILES_MAP
max_model_input_sizes = PRETRAINED_POSITIONAL_EMBEDDINGS_SIZES
pretrained_init_configuration = PRETRAINED_INIT_CONFIGURATION
model_input_names = ["input_ids", "attention_mask"]
def __init__(
self,
vocab_file,
merges_file,
do_lower_case=True,
errors="replace",
bos_token="<s>",
eos_token="</s>",
sep_token="</s>",
cls_token="<s>",
unk_token="<unk>",
pad_token="<pad>",
mask_token="<mask>",
add_prefix_space=False,
max_cell_length=15,
**kwargs,
):
bos_token = AddedToken(bos_token, lstrip=False, rstrip=False) if isinstance(bos_token, str) else bos_token
eos_token = AddedToken(eos_token, lstrip=False, rstrip=False) if isinstance(eos_token, str) else eos_token
sep_token = AddedToken(sep_token, lstrip=False, rstrip=False) if isinstance(sep_token, str) else sep_token
cls_token = AddedToken(cls_token, lstrip=False, rstrip=False) if isinstance(cls_token, str) else cls_token
unk_token = AddedToken(unk_token, lstrip=False, rstrip=False) if isinstance(unk_token, str) else unk_token
pad_token = AddedToken(pad_token, lstrip=False, rstrip=False) if isinstance(pad_token, str) else pad_token
# Mask token behave like a normal word, i.e. include the space before it
mask_token = AddedToken(mask_token, lstrip=True, rstrip=False) if isinstance(mask_token, str) else mask_token
super().__init__(
vocab_file=vocab_file,
merges_file=merges_file,
do_lower_case=do_lower_case,
errors=errors,
bos_token=bos_token,
eos_token=eos_token,
unk_token=unk_token,
sep_token=sep_token,
cls_token=cls_token,
pad_token=pad_token,
mask_token=mask_token,
add_prefix_space=add_prefix_space,
max_cell_length=max_cell_length,
**kwargs,
)
with open(vocab_file, encoding="utf-8") as vocab_handle:
self.encoder = json.load(vocab_handle)
self.decoder = {v: k for k, v in self.encoder.items()}
self.errors = errors # how to handle errors in decoding
self.byte_encoder = bytes_to_unicode()
self.byte_decoder = {v: k for k, v in self.byte_encoder.items()}
with open(merges_file, encoding="utf-8") as merges_handle:
bpe_merges = merges_handle.read().split("\n")[1:-1]
bpe_merges = [tuple(merge.split()) for merge in bpe_merges]
self.bpe_ranks = dict(zip(bpe_merges, range(len(bpe_merges))))
self.cache = {}
self.add_prefix_space = add_prefix_space
self.do_lower_case = do_lower_case
# Should have added re.IGNORECASE so BPE merges can happen for capitalized versions of contractions
self.pat = re.compile(r"""'s|'t|'re|'ve|'m|'ll|'d| ?\p{L}+| ?\p{N}+| ?[^\s\p{L}\p{N}]+|\s+(?!\S)|\s+""")
# additional properties
self.max_cell_length = max_cell_length
self.table_linearize = IndexedRowTableLinearize()
def build_inputs_with_special_tokens(
self, token_ids_0: List[int], token_ids_1: Optional[List[int]] = None
) -> List[int]:
"""
Build model inputs from a sequence or a pair of sequence for sequence classification tasks by concatenating and
adding special tokens. A TAPEX sequence has the following format:
- single sequence: `<s> X </s>`
- pair of sequences: `<s> A </s></s> B </s>`
Args:
token_ids_0 (`List[int]`):
List of IDs to which the special tokens will be added.
token_ids_1 (`List[int]`, *optional*):
Optional second list of IDs for sequence pairs.
Returns:
`List[int]`: List of [input IDs](../glossary#input-ids) with the appropriate special tokens.
"""
if token_ids_1 is None:
return [self.cls_token_id] + token_ids_0 + [self.sep_token_id]
cls = [self.cls_token_id]
sep = [self.sep_token_id]
return cls + token_ids_0 + sep + sep + token_ids_1 + sep
def get_special_tokens_mask(
self, token_ids_0: List[int], token_ids_1: Optional[List[int]] = None, already_has_special_tokens: bool = False
) -> List[int]:
"""
Args:
Retrieve sequence ids from a token list that has no special tokens added. This method is called when adding
special tokens using the tokenizer `prepare_for_model` method.
token_ids_0 (`List[int]`):
List of IDs.
token_ids_1 (`List[int]`, *optional*):
Optional second list of IDs for sequence pairs.
already_has_special_tokens (`bool`, *optional*, defaults to `False`):
Whether or not the token list is already formatted with special tokens for the model.
Returns:
`List[int]`: A list of integers in the range [0, 1]: 1 for a special token, 0 for a sequence token.
"""
if already_has_special_tokens:
return super().get_special_tokens_mask(
token_ids_0=token_ids_0, token_ids_1=token_ids_1, already_has_special_tokens=True
)
if token_ids_1 is None:
return [1] + ([0] * len(token_ids_0)) + [1]
return [1] + ([0] * len(token_ids_0)) + [1, 1] + ([0] * len(token_ids_1)) + [1]
def create_token_type_ids_from_sequences(
self, token_ids_0: List[int], token_ids_1: Optional[List[int]] = None
) -> List[int]:
"""
Args:
Create a mask from the two sequences passed to be used in a sequence-pair classification task. TAPEX does not:
make use of token type ids, therefore a list of zeros is returned.
token_ids_0 (`List[int]`):
List of IDs.
token_ids_1 (`List[int]`, *optional*):
Optional second list of IDs for sequence pairs.
Returns:
`List[int]`: List of zeros.
"""
sep = [self.sep_token_id]
cls = [self.cls_token_id]
if token_ids_1 is None:
return len(cls + token_ids_0 + sep) * [0]
return len(cls + token_ids_0 + sep + sep + token_ids_1 + sep) * [0]
def prepare_for_tokenization(self, text, is_split_into_words=False, **kwargs):
add_prefix_space = kwargs.pop("add_prefix_space", self.add_prefix_space)
if (is_split_into_words or add_prefix_space) and (len(text) > 0 and not text[0].isspace()):
text = " " + text
return (text, kwargs)
@property
def vocab_size(self):
return len(self.encoder)
def get_vocab(self):
return dict(self.encoder, **self.added_tokens_encoder)
def bpe(self, token):
if token in self.cache:
return self.cache[token]
word = tuple(token)
pairs = get_pairs(word)
if not pairs:
return token
while True:
bigram = min(pairs, key=lambda pair: self.bpe_ranks.get(pair, float("inf")))
if bigram not in self.bpe_ranks:
break
first, second = bigram
new_word = []
i = 0
while i < len(word):
try:
j = word.index(first, i)
except ValueError:
new_word.extend(word[i:])
break
else:
new_word.extend(word[i:j])
i = j
if word[i] == first and i < len(word) - 1 and word[i + 1] == second:
new_word.append(first + second)
i += 2
else:
new_word.append(word[i])
i += 1
new_word = tuple(new_word)
word = new_word
if len(word) == 1:
break
else:
pairs = get_pairs(word)
word = " ".join(word)
self.cache[token] = word
return word
def _tokenize(self, text):
"""Tokenize a string."""
bpe_tokens = []
for token in re.findall(self.pat, text):
token = "".join(
self.byte_encoder[b] for b in token.encode("utf-8")
) # Maps all our bytes to unicode strings, avoiding control tokens of the BPE (spaces in our case)
bpe_tokens.extend(bpe_token for bpe_token in self.bpe(token).split(" "))
return bpe_tokens
def _convert_token_to_id(self, token):
"""Converts a token (str) in an id using the vocab."""
return self.encoder.get(token, self.encoder.get(self.unk_token))
def _convert_id_to_token(self, index):
"""Converts an index (integer) in a token (str) using the vocab."""
return self.decoder.get(index)
def convert_tokens_to_string(self, tokens):
"""Converts a sequence of tokens (string) in a single string."""
text = "".join(tokens)
text = bytearray([self.byte_decoder[c] for c in text]).decode("utf-8", errors=self.errors)
return text
def save_vocabulary(self, save_directory: str, filename_prefix: Optional[str] = None) -> Tuple[str]:
if not os.path.isdir(save_directory):
logger.error(f"Vocabulary path ({save_directory}) should be a directory")
return
vocab_file = os.path.join(
save_directory, (filename_prefix + "-" if filename_prefix else "") + VOCAB_FILES_NAMES["vocab_file"]
)
merge_file = os.path.join(
save_directory, (filename_prefix + "-" if filename_prefix else "") + VOCAB_FILES_NAMES["merges_file"]
)
with open(vocab_file, "w", encoding="utf-8") as f:
f.write(json.dumps(self.encoder, indent=2, sort_keys=True, ensure_ascii=False) + "\n")
index = 0
with open(merge_file, "w", encoding="utf-8") as writer:
writer.write("#version: 0.2\n")
for bpe_tokens, token_index in sorted(self.bpe_ranks.items(), key=lambda kv: kv[1]):
if index != token_index:
logger.warning(
f"Saving vocabulary to {merge_file}: BPE merge indices are not consecutive."
" Please check that the tokenizer is not corrupted!"
)
index = token_index
writer.write(" ".join(bpe_tokens) + "\n")
index += 1
return vocab_file, merge_file
@add_end_docstrings(ENCODE_KWARGS_DOCSTRING, TAPEX_ENCODE_PLUS_ADDITIONAL_KWARGS_DOCSTRING)
def __call__(
self,
table: Union["pd.DataFrame", List["pd.DataFrame"]] = None,
query: Optional[Union[TextInput, List[TextInput]]] = None,
answer: Union[str, List[str]] = None,
add_special_tokens: bool = True,
padding: Union[bool, str, PaddingStrategy] = False,
truncation: Union[bool, str, TruncationStrategy] = None,
max_length: Optional[int] = None,
stride: int = 0,
pad_to_multiple_of: Optional[int] = None,
return_tensors: Optional[Union[str, TensorType]] = None,
return_token_type_ids: Optional[bool] = None,
return_attention_mask: Optional[bool] = None,
return_overflowing_tokens: bool = False,
return_special_tokens_mask: bool = False,
return_offsets_mapping: bool = False,
return_length: bool = False,
verbose: bool = True,
**kwargs,
) -> BatchEncoding:
"""
Main method to tokenize and prepare for the model one or several table-sequence pair(s).
Args:
table (`pd.DataFrame`, `List[pd.DataFrame]`):
Table(s) containing tabular data.
query (`str` or `List[str]`, *optional*):
Sentence or batch of sentences related to one or more table(s) to be encoded. Note that the number of
sentences must match the number of tables.
answer (`str` or `List[str]`, *optional*):
Optionally, the corresponding answer to the questions as supervision.
"""
if table is not None:
return self.source_call_func(
table=table,
query=query,
answer=answer,
add_special_tokens=add_special_tokens,
padding=padding,
truncation=truncation,
max_length=max_length,
stride=stride,
pad_to_multiple_of=pad_to_multiple_of,
return_tensors=return_tensors,
return_token_type_ids=return_token_type_ids,
return_attention_mask=return_attention_mask,
return_overflowing_tokens=return_overflowing_tokens,
return_special_tokens_mask=return_special_tokens_mask,
return_offsets_mapping=return_offsets_mapping,
return_length=return_length,
verbose=verbose,
**kwargs,
)
elif answer is not None:
return self.target_call_func(
answer=answer,
add_special_tokens=add_special_tokens,
padding=padding,
truncation=truncation,
max_length=max_length,
stride=stride,
pad_to_multiple_of=pad_to_multiple_of,
return_tensors=return_tensors,
return_token_type_ids=return_token_type_ids,
return_attention_mask=return_attention_mask,
return_overflowing_tokens=return_overflowing_tokens,
return_special_tokens_mask=return_special_tokens_mask,
return_offsets_mapping=return_offsets_mapping,
return_length=return_length,
verbose=verbose,
**kwargs,
)
else:
raise ValueError("You need to provide either a `table` or an `answer`.")
def source_call_func(
self,
table: Union["pd.DataFrame", List["pd.DataFrame"]],
query: Optional[Union[TextInput, List[TextInput]]] = None,
answer: Union[str, List[str]] = None,
add_special_tokens: bool = True,
padding: Union[bool, str, PaddingStrategy] = False,
truncation: Union[bool, str, TruncationStrategy] = None,
max_length: Optional[int] = None,
stride: int = 0,
pad_to_multiple_of: Optional[int] = None,
return_tensors: Optional[Union[str, TensorType]] = None,
return_token_type_ids: Optional[bool] = None,
return_attention_mask: Optional[bool] = None,
return_overflowing_tokens: bool = False,
return_special_tokens_mask: bool = False,
return_offsets_mapping: bool = False,
return_length: bool = False,
verbose: bool = True,
**kwargs,
) -> BatchEncoding:
# Input type checking for clearer error
valid_table = False
valid_query = False
# Check that table have a valid type
if isinstance(table, pd.DataFrame):
valid_table = True
elif isinstance(table, (list, tuple)) and isinstance(table[0], pd.DataFrame):
valid_table = True
# Check that query have a valid type
if query is None or isinstance(query, str):
valid_query = True
elif isinstance(query, (list, tuple)):
if len(query) == 0 or isinstance(query[0], str):
valid_query = True
if not valid_table:
raise ValueError(
"table input must of type `pd.DataFrame` (single example), `List[pd.DataFrame]` (batch of examples). "
)
if not valid_query:
raise ValueError("query input must of type `str` (single example), `List[str]` (batch of examples). ")
is_batched = isinstance(table, (list, tuple)) or isinstance(query, (list, tuple))
if is_batched:
return self.batch_encode_plus(
table=table,
query=query,
answer=answer,
add_special_tokens=add_special_tokens,
padding=padding,
truncation=truncation,
max_length=max_length,
pad_to_multiple_of=pad_to_multiple_of,
return_tensors=return_tensors,
return_token_type_ids=return_token_type_ids,
return_attention_mask=return_attention_mask,
return_overflowing_tokens=return_overflowing_tokens,
return_special_tokens_mask=return_special_tokens_mask,
return_offsets_mapping=return_offsets_mapping,
return_length=return_length,
verbose=verbose,
**kwargs,
)
else:
return self.encode_plus(
table=table,
query=query,
answer=answer,
add_special_tokens=add_special_tokens,
padding=padding,
truncation=truncation,
max_length=max_length,
pad_to_multiple_of=pad_to_multiple_of,
return_tensors=return_tensors,
return_token_type_ids=return_token_type_ids,
return_attention_mask=return_attention_mask,
return_overflowing_tokens=return_overflowing_tokens,
return_special_tokens_mask=return_special_tokens_mask,
return_offsets_mapping=return_offsets_mapping,
return_length=return_length,
verbose=verbose,
**kwargs,
)
@add_end_docstrings(ENCODE_KWARGS_DOCSTRING, TAPEX_ENCODE_PLUS_ADDITIONAL_KWARGS_DOCSTRING)
def batch_encode_plus(
self,
table: Union["pd.DataFrame", List["pd.DataFrame"]],
query: Optional[List[TextInput]] = None,
answer: List[str] = None,
add_special_tokens: bool = True,
padding: Union[bool, str, PaddingStrategy] = False,
truncation: Union[bool, str] = None,
max_length: Optional[int] = None,
pad_to_multiple_of: Optional[int] = None,
return_tensors: Optional[Union[str, TensorType]] = None,
return_token_type_ids: Optional[bool] = None,
return_attention_mask: Optional[bool] = None,
return_overflowing_tokens: bool = False,
return_special_tokens_mask: bool = False,
return_offsets_mapping: bool = False,
return_length: bool = False,
verbose: bool = True,
**kwargs,
) -> BatchEncoding:
"""
<Tip warning={true}>
This method is deprecated, `__call__` should be used instead.
</Tip>
"""
# Backward compatibility for 'truncation_strategy', 'pad_to_max_length'
padding_strategy, truncation_strategy, max_length, kwargs = self._get_padding_truncation_strategies(
padding=padding,
truncation=truncation,
max_length=max_length,
pad_to_multiple_of=pad_to_multiple_of,
verbose=verbose,
**kwargs,
)
return self._batch_encode_plus(
table=table,
query=query,
answer=answer,
add_special_tokens=add_special_tokens,
padding_strategy=padding_strategy,
truncation_strategy=truncation_strategy,
max_length=max_length,
pad_to_multiple_of=pad_to_multiple_of,
return_tensors=return_tensors,
return_token_type_ids=return_token_type_ids,
return_attention_mask=return_attention_mask,
return_overflowing_tokens=return_overflowing_tokens,
return_special_tokens_mask=return_special_tokens_mask,
return_offsets_mapping=return_offsets_mapping,
return_length=return_length,
verbose=verbose,
**kwargs,
)
def _batch_encode_plus(
self,
table: Union["pd.DataFrame", List["pd.DataFrame"]],
query: Optional[List[TextInput]] = None,
answer: Optional[List[str]] = None,
add_special_tokens: bool = True,
padding_strategy: PaddingStrategy = PaddingStrategy.DO_NOT_PAD,
truncation_strategy: TruncationStrategy = TruncationStrategy.DO_NOT_TRUNCATE,
max_length: Optional[int] = None,
stride: int = 0,
pad_to_multiple_of: Optional[int] = None,
return_tensors: Optional[Union[str, TensorType]] = None,
return_token_type_ids: Optional[bool] = None,
return_attention_mask: Optional[bool] = None,
return_overflowing_tokens: bool = False,
return_special_tokens_mask: bool = False,
return_offsets_mapping: bool = False,
return_length: bool = False,
verbose: bool = True,
**kwargs,
) -> BatchEncoding:
if return_offsets_mapping:
raise NotImplementedError(
"return_offset_mapping is not available when using Python tokenizers. "
"To use this feature, change your tokenizer to one deriving from "
"transformers.PreTrainedTokenizerFast."
)
if isinstance(table, pd.DataFrame) and isinstance(query, (list, tuple)):
# single table, many queries case
# duplicate table for every query
table = [table] * len(query)
if isinstance(table, (list, tuple)) and isinstance(query, str):
# many tables, single query case
# duplicate query for every table
query = [query] * len(table)
batch_outputs = self._batch_prepare_for_model(
table=table,
query=query,
answer=answer,
add_special_tokens=add_special_tokens,
padding_strategy=padding_strategy,
truncation_strategy=truncation_strategy,
max_length=max_length,
stride=stride,
pad_to_multiple_of=pad_to_multiple_of,
return_attention_mask=return_attention_mask,
return_token_type_ids=return_token_type_ids,
return_overflowing_tokens=return_overflowing_tokens,
return_special_tokens_mask=return_special_tokens_mask,
return_length=return_length,
return_tensors=return_tensors,
verbose=verbose,
)
return BatchEncoding(batch_outputs)
@add_end_docstrings(ENCODE_KWARGS_DOCSTRING, TAPEX_ENCODE_PLUS_ADDITIONAL_KWARGS_DOCSTRING)
def _batch_prepare_for_model(
self,
table: Union["pd.DataFrame", List["pd.DataFrame"]],
query: Optional[Union[TextInput, List[TextInput]]] = None,
answer: Optional[Union[str, List[str]]] = None,
add_special_tokens: bool = True,
padding_strategy: PaddingStrategy = PaddingStrategy.DO_NOT_PAD,
truncation_strategy: TruncationStrategy = TruncationStrategy.DO_NOT_TRUNCATE,
max_length: Optional[int] = None,
stride: int = 0,
pad_to_multiple_of: Optional[int] = None,
return_tensors: Optional[str] = None,
return_token_type_ids: Optional[bool] = None,
return_attention_mask: Optional[bool] = None,
return_overflowing_tokens: bool = False,
return_special_tokens_mask: bool = False,
return_length: bool = False,
verbose: bool = True,
) -> BatchEncoding:
"""
This method adds special tokens, truncates sequences if overflowing while taking into account the special
tokens and manages a moving window (with user defined stride) for overflowing tokens.
"""
batch_outputs = {}
if answer is None:
answer = [None] * len(table)
for _table, _query, _answer in zip(table, query, answer):
text = self.prepare_table_query(
_table, _query, _answer, truncation_strategy=truncation_strategy, max_length=max_length
)
if self.do_lower_case:
text = text.lower()
tokens = self.tokenize(text)
outputs = self.prepare_for_model(
ids=self.convert_tokens_to_ids(tokens),
add_special_tokens=add_special_tokens,
padding=PaddingStrategy.DO_NOT_PAD.value, # we pad in batch afterwards
truncation=truncation_strategy.value,
max_length=max_length,
stride=stride,
pad_to_multiple_of=None, # we pad in batch afterwards
return_attention_mask=False, # we pad in batch afterwards
return_token_type_ids=return_token_type_ids,
return_overflowing_tokens=return_overflowing_tokens,
return_special_tokens_mask=return_special_tokens_mask,
return_length=return_length,
return_tensors=None, # We convert the whole batch to tensors at the end
prepend_batch_axis=False,
verbose=verbose,
)
for key, value in outputs.items():
if key not in batch_outputs:
batch_outputs[key] = []
batch_outputs[key].append(value)
batch_outputs = self.pad(
batch_outputs,
padding=padding_strategy.value,
max_length=max_length,
pad_to_multiple_of=pad_to_multiple_of,
return_attention_mask=return_attention_mask,
)
batch_outputs = BatchEncoding(batch_outputs, tensor_type=return_tensors)
return batch_outputs
@add_end_docstrings(ENCODE_KWARGS_DOCSTRING)
def encode(
self,
table: "pd.DataFrame",
query: Optional[TextInput] = None,
answer: Optional[str] = None,
add_special_tokens: bool = True,
padding: Union[bool, str, PaddingStrategy] = False,
truncation: Union[bool, str, TruncationStrategy, TapexTruncationStrategy] = None,
max_length: Optional[int] = None,
return_tensors: Optional[Union[str, TensorType]] = None,
**kwargs,
) -> List[int]:
"""
Prepare a table, a string and possible answer for the model. This method does not return token type IDs,
attention masks, etc. which are necessary for the model to work correctly. Use this method if you want to build
your processing on your own, otherwise refer to `__call__`.
"""
encoded_inputs = self.encode_plus(
table,
query=query,
answer=answer,
add_special_tokens=add_special_tokens,
padding=padding,
truncation=truncation,
max_length=max_length,
return_tensors=return_tensors,
**kwargs,
)
return encoded_inputs["input_ids"]
@add_end_docstrings(ENCODE_KWARGS_DOCSTRING, TAPEX_ENCODE_PLUS_ADDITIONAL_KWARGS_DOCSTRING)
def encode_plus(
self,
table: "pd.DataFrame",
query: Optional[TextInput] = None,
answer: Optional[str] = None,
add_special_tokens: bool = True,
padding: Union[bool, str, PaddingStrategy] = False,
truncation: Union[bool, str] = None,
max_length: Optional[int] = None,
pad_to_multiple_of: Optional[int] = None,
return_tensors: Optional[Union[str, TensorType]] = None,
return_token_type_ids: Optional[bool] = None,
return_attention_mask: Optional[bool] = None,
return_special_tokens_mask: bool = False,
return_offsets_mapping: bool = False,
return_length: bool = False,
verbose: bool = True,
**kwargs,
) -> BatchEncoding:
# Backward compatibility for 'truncation_strategy', 'pad_to_max_length'
padding_strategy, truncation_strategy, max_length, kwargs = self._get_padding_truncation_strategies(
padding=padding,
truncation=truncation,
max_length=max_length,
pad_to_multiple_of=pad_to_multiple_of,
verbose=verbose,
**kwargs,
)
return self._encode_plus(
table=table,
query=query,
answer=answer,
add_special_tokens=add_special_tokens,
padding_strategy=padding_strategy,
truncation_strategy=truncation_strategy,
max_length=max_length,
pad_to_multiple_of=pad_to_multiple_of,
return_tensors=return_tensors,
return_token_type_ids=return_token_type_ids,
return_attention_mask=return_attention_mask,
return_special_tokens_mask=return_special_tokens_mask,
return_offsets_mapping=return_offsets_mapping,
return_length=return_length,
verbose=verbose,
**kwargs,
)
def _encode_plus(
self,
table: "pd.DataFrame",
query: Optional[TextInput] = None,
answer: Optional[str] = None,
add_special_tokens: bool = True,
padding_strategy: PaddingStrategy = PaddingStrategy.DO_NOT_PAD,
truncation_strategy: TruncationStrategy = TruncationStrategy.DO_NOT_TRUNCATE,
max_length: Optional[int] = None,
stride: int = 0,
pad_to_multiple_of: Optional[int] = None,
return_tensors: Optional[Union[str, TensorType]] = None,
return_token_type_ids: Optional[bool] = None,
return_attention_mask: Optional[bool] = None,
return_overflowing_tokens: bool = False,
return_special_tokens_mask: bool = False,
return_offsets_mapping: bool = False,
return_length: bool = False,
verbose: bool = True,
**kwargs,
) -> BatchEncoding:
if return_offsets_mapping:
raise NotImplementedError(
"return_offset_mapping is not available when using Python tokenizers. "
"To use this feature, change your tokenizer to one deriving from "
"transformers.PreTrainedTokenizerFast. "
"More information on available tokenizers at "
"https://github.com/huggingface/transformers/pull/2674"
)
text = self.prepare_table_query(
table, query, answer, truncation_strategy=truncation_strategy, max_length=max_length
)
# if necessary, perform lower case
if self.do_lower_case:
text = text.lower()
tokens = self.tokenize(text)
return self.prepare_for_model(
ids=self.convert_tokens_to_ids(tokens),
add_special_tokens=add_special_tokens,
padding=padding_strategy.value,
truncation=truncation_strategy.value,
max_length=max_length,
stride=stride,
pad_to_multiple_of=pad_to_multiple_of,
return_tensors=return_tensors,
prepend_batch_axis=True,
return_attention_mask=return_attention_mask,
return_token_type_ids=return_token_type_ids,
return_overflowing_tokens=return_overflowing_tokens,
return_special_tokens_mask=return_special_tokens_mask,
return_length=return_length,
verbose=verbose,
)
def target_call_func(
self,
answer: Union[str, List[str]],
add_special_tokens: bool = True,
padding: Union[bool, str, PaddingStrategy] = False,
truncation: Union[bool, str, TruncationStrategy] = None,
max_length: Optional[int] = None,
stride: int = 0,
pad_to_multiple_of: Optional[int] = None,
return_tensors: Optional[Union[str, TensorType]] = None,
return_token_type_ids: Optional[bool] = None,
return_attention_mask: Optional[bool] = None,
return_overflowing_tokens: bool = False,
return_special_tokens_mask: bool = False,
return_offsets_mapping: bool = False,
return_length: bool = False,
verbose: bool = True,
**kwargs,
) -> BatchEncoding:
"""
The method tokenizes and prepares the answer label for the model.
Args:
answer (`str` or `List[str]`):
Corresponding answer supervision to the queries for training the model.
"""
is_batched = isinstance(answer, (list, tuple))
if is_batched:
return self.target_batch_encode_plus(
answer=answer,
add_special_tokens=add_special_tokens,
padding=padding,
truncation=truncation,
max_length=max_length,
pad_to_multiple_of=pad_to_multiple_of,
return_tensors=return_tensors,
return_token_type_ids=return_token_type_ids,
return_attention_mask=return_attention_mask,
return_overflowing_tokens=return_overflowing_tokens,
return_special_tokens_mask=return_special_tokens_mask,
return_offsets_mapping=return_offsets_mapping,
return_length=return_length,
verbose=verbose,
**kwargs,
)
else:
return self.target_encode_plus(
answer=answer,
add_special_tokens=add_special_tokens,
padding=padding,
truncation=truncation,
max_length=max_length,
pad_to_multiple_of=pad_to_multiple_of,
return_tensors=return_tensors,
return_token_type_ids=return_token_type_ids,
return_attention_mask=return_attention_mask,
return_overflowing_tokens=return_overflowing_tokens,
return_special_tokens_mask=return_special_tokens_mask,
return_offsets_mapping=return_offsets_mapping,
return_length=return_length,
verbose=verbose,
**kwargs,
)
def target_batch_encode_plus(
self,
answer: List[str],
add_special_tokens: bool = True,
padding: Union[bool, str, PaddingStrategy] = False,
truncation: Union[bool, str] = None,
max_length: Optional[int] = None,
pad_to_multiple_of: Optional[int] = None,
return_tensors: Optional[Union[str, TensorType]] = None,
return_token_type_ids: Optional[bool] = None,
return_attention_mask: Optional[bool] = None,
return_overflowing_tokens: bool = False,
return_special_tokens_mask: bool = False,
return_offsets_mapping: bool = False,
return_length: bool = False,
verbose: bool = True,
**kwargs,
) -> BatchEncoding:
"""
Prepare answer strings for the model.
Args:
answer `List[str]`:
Corresponding answer supervision to the queries for training the model.
"""
# Backward compatibility for 'truncation_strategy', 'pad_to_max_length'
padding_strategy, truncation_strategy, max_length, kwargs = self._get_padding_truncation_strategies(
padding=padding,
truncation=truncation,
max_length=max_length,
pad_to_multiple_of=pad_to_multiple_of,
verbose=verbose,
**kwargs,
)
return self._target_batch_encode_plus(
answer=answer,
add_special_tokens=add_special_tokens,
padding_strategy=padding_strategy,
truncation_strategy=truncation_strategy,
max_length=max_length,
pad_to_multiple_of=pad_to_multiple_of,
return_tensors=return_tensors,
return_token_type_ids=return_token_type_ids,
return_attention_mask=return_attention_mask,
return_overflowing_tokens=return_overflowing_tokens,
return_special_tokens_mask=return_special_tokens_mask,
return_offsets_mapping=return_offsets_mapping,
return_length=return_length,
verbose=verbose,
**kwargs,
)
def _target_batch_encode_plus(
self,
answer: List[str],
add_special_tokens: bool = True,
padding_strategy: PaddingStrategy = PaddingStrategy.DO_NOT_PAD,
truncation_strategy: TruncationStrategy = TruncationStrategy.DO_NOT_TRUNCATE,
max_length: Optional[int] = None,
stride: int = 0,
pad_to_multiple_of: Optional[int] = None,
return_tensors: Optional[Union[str, TensorType]] = None,
return_token_type_ids: Optional[bool] = None,
return_attention_mask: Optional[bool] = None,
return_overflowing_tokens: bool = False,
return_special_tokens_mask: bool = False,
return_offsets_mapping: bool = False,
return_length: bool = False,
verbose: bool = True,
**kwargs,
) -> BatchEncoding:
batch_outputs = {}
for text in answer:
if self.do_lower_case:
text = text.lower()
tokens = self.tokenize(text)
outputs = self.prepare_for_model(
ids=self.convert_tokens_to_ids(tokens),
add_special_tokens=add_special_tokens,
padding=PaddingStrategy.DO_NOT_PAD.value, # we pad in batch afterwards
truncation=truncation_strategy.value,
max_length=max_length,
stride=stride,
pad_to_multiple_of=None, # we pad in batch afterwards
return_attention_mask=False, # we pad in batch afterwards
return_token_type_ids=return_token_type_ids,
return_overflowing_tokens=return_overflowing_tokens,
return_special_tokens_mask=return_special_tokens_mask,
return_length=return_length,
return_tensors=None, # We convert the whole batch to tensors at the end
prepend_batch_axis=False,
verbose=verbose,
)
for key, value in outputs.items():
if key not in batch_outputs:
batch_outputs[key] = []
batch_outputs[key].append(value)
batch_outputs = self.pad(
batch_outputs,
padding=padding_strategy.value,
max_length=max_length,
pad_to_multiple_of=pad_to_multiple_of,
return_attention_mask=return_attention_mask,
)
batch_outputs = BatchEncoding(batch_outputs, tensor_type=return_tensors)
return BatchEncoding(batch_outputs)
def target_encode(
self,
answer: str,
add_special_tokens: bool = True,
padding: Union[bool, str, PaddingStrategy] = False,
truncation: Union[bool, str, TruncationStrategy, TapexTruncationStrategy] = None,
max_length: Optional[int] = None,
return_tensors: Optional[Union[str, TensorType]] = None,
**kwargs,
) -> List[int]:
"""
Prepare the answer string for the model. This method does not return token type IDs, attention masks, etc.
which are necessary for the model to work correctly. Use this method if you want to build your processing on
your own, otherwise refer to `__call__`.
Args:
answer `str`:
Corresponding answer supervision to the queries for training the model
"""
encoded_outputs = self.target_encode_plus(
answer=answer,
add_special_tokens=add_special_tokens,
padding=padding,
truncation=truncation,
max_length=max_length,
return_tensors=return_tensors,
**kwargs,
)
return encoded_outputs["input_ids"]
def target_encode_plus(
self,
answer: str,
add_special_tokens: bool = True,
padding: Union[bool, str, PaddingStrategy] = False,
truncation: Union[bool, str] = None,
max_length: Optional[int] = None,
pad_to_multiple_of: Optional[int] = None,
return_tensors: Optional[Union[str, TensorType]] = None,
return_token_type_ids: Optional[bool] = None,
return_attention_mask: Optional[bool] = None,
return_special_tokens_mask: bool = False,
return_offsets_mapping: bool = False,
return_length: bool = False,
verbose: bool = True,
**kwargs,
) -> BatchEncoding:
"""
Prepare a answer string for the model.
Args:
answer `str`:
Corresponding answer supervision to the queries for training the model.
"""
# Backward compatibility for 'truncation_strategy', 'pad_to_max_length'
padding_strategy, truncation_strategy, max_length, kwargs = self._get_padding_truncation_strategies(
padding=padding,
truncation=truncation,
max_length=max_length,
pad_to_multiple_of=pad_to_multiple_of,
verbose=verbose,
**kwargs,
)
return self._target_encode_plus(
answer=answer,
add_special_tokens=add_special_tokens,
padding_strategy=padding_strategy,
truncation_strategy=truncation_strategy,
max_length=max_length,
pad_to_multiple_of=pad_to_multiple_of,
return_tensors=return_tensors,
return_token_type_ids=return_token_type_ids,
return_attention_mask=return_attention_mask,
return_special_tokens_mask=return_special_tokens_mask,
return_offsets_mapping=return_offsets_mapping,
return_length=return_length,
verbose=verbose,
**kwargs,
)
def _target_encode_plus(
self,
answer: str,
add_special_tokens: bool = True,
padding_strategy: PaddingStrategy = PaddingStrategy.DO_NOT_PAD,
truncation_strategy: TruncationStrategy = TruncationStrategy.DO_NOT_TRUNCATE,
max_length: Optional[int] = None,
stride: int = 0,
pad_to_multiple_of: Optional[int] = None,
return_tensors: Optional[Union[str, TensorType]] = None,
return_token_type_ids: Optional[bool] = None,
return_attention_mask: Optional[bool] = None,
return_overflowing_tokens: bool = False,
return_special_tokens_mask: bool = False,
return_offsets_mapping: bool = False,
return_length: bool = False,
verbose: bool = True,
**kwargs,
) -> BatchEncoding:
if return_offsets_mapping:
raise NotImplementedError(
"return_offset_mapping is not available when using Python tokenizers. "
"To use this feature, change your tokenizer to one deriving from "
"transformers.PreTrainedTokenizerFast. "
"More information on available tokenizers at "
"https://github.com/huggingface/transformers/pull/2674"
)
text = answer
# if necessary, perform lower case
if self.do_lower_case:
text = text.lower()
tokens = self.tokenize(text)
return self.prepare_for_model(
ids=self.convert_tokens_to_ids(tokens),
add_special_tokens=add_special_tokens,
padding=padding_strategy.value,
truncation=truncation_strategy.value,
max_length=max_length,
stride=stride,
pad_to_multiple_of=pad_to_multiple_of,
return_tensors=return_tensors,
prepend_batch_axis=True,
return_attention_mask=return_attention_mask,
return_token_type_ids=return_token_type_ids,
return_overflowing_tokens=return_overflowing_tokens,
return_special_tokens_mask=return_special_tokens_mask,
return_length=return_length,
verbose=verbose,
)
def prepare_table_query(
self,
table,
query,
answer=None,
truncation_strategy=Union[str, TruncationStrategy, TapexTruncationStrategy],
max_length=None,
):
"""
This method can be used to linearize a table and add a corresponding query.
Optionally, it also handles truncation of the table (cells).
An answer can be provided for more precise truncation.
"""
if not table.empty:
# step 1: create table dictionary
table_content = {"header": list(table.columns), "rows": [list(row.values) for i, row in table.iterrows()]}
# step 2: modify table internally
# always truncate table cells based on self.max_cell_length
# optionally truncate rows if truncation_strategy is set to it
self.truncate_table_cells(table_content, query, answer)
if truncation_strategy == TapexTruncationStrategy.DROP_ROWS_TO_FIT:
self.truncate_table_rows(table_content, query, answer, max_length=max_length)
# step 3: linearize table
linear_table = self.table_linearize.process_table(table_content)
else:
linear_table = ""
if linear_table == "":
logger.warning(
"You provide an empty table, or all cells contain much tokens (e.g., >= 1024 tokens). "
+ f"Please carefully check the corresponding table with the query : {query}."
)
if query == "":
logger.warning("You provide nothing to query with respect to the table.")
# step 4: concatenate query with linear_table
separator = " " if query and linear_table else ""
joint_input = (query + separator + linear_table) if query else linear_table
return joint_input
def truncate_table_cells(self, table_content: Dict, question: str, answer: List):
# TODO (Qian): is it possible to revert the original cell if it is in the final answer?
cell_mapping = {}
for row in table_content["rows"]:
for i, cell in enumerate(row):
truncate_cell = self.truncate_cell(cell)
if truncate_cell is not None:
cell_mapping[cell] = truncate_cell
row[i] = truncate_cell
# modify the answer list
if answer is not None:
for i, case in enumerate(answer):
if case in cell_mapping.keys():
answer[i] = cell_mapping[case]
def truncate_cell(self, cell_value):
# do not process on these cases
if isinstance(cell_value, int) or isinstance(cell_value, float):
return cell_value
if cell_value.strip() != "":
try_tokens = self.tokenize(cell_value)
if len(try_tokens) >= self.max_cell_length:
retain_tokens = try_tokens[: self.max_cell_length]
retain_cell_value = self.convert_tokens_to_string(retain_tokens)
return retain_cell_value
else:
return None
else:
return cell_value
def truncate_table_rows(
self, table_content: Dict, question: str, answer: Optional[Union[str, List[str]]] = None, max_length=None
):
"""
Args:
table_content:
{"header": xxx, "rows": xxx, "id" (Optionally): xxx}
question:
natural language sentence
answer:
if for training, is the supervision; otherwise will be empty
"""
delete_ratio, remain_token_len = self.estimate_delete_ratio(table_content, question, max_length)
# randomly delete unrelated rows
self.delete_unrelated_rows(table_content, question, answer, delete_ratio)
# guarantee the result < max_length
maximum_keep_rows = 0
for ind, row_example in enumerate(table_content["rows"]):
value_string = self.table_linearize.process_row(row_example, ind + 1)
value_token_len = len(self.tokenize(value_string))
# over the size limit, and take action
if value_token_len > remain_token_len:
break
remain_token_len -= value_token_len
maximum_keep_rows += 1
del table_content["rows"][maximum_keep_rows:]
def estimate_delete_ratio(self, table_content: Dict, question: str, max_length=None):
if "header" not in table_content or "rows" not in table_content:
raise ValueError("The table content should contain both 'header' and 'rows' keys.")
# calculate the tokens of header, special tokens will only be pre-prepended into question
question_tokens = self.tokenize(question, add_special_tokens=True)
# calculate the tokens of header
header_string = self.table_linearize.process_header(table_content["header"])
header_tokens = self.tokenize(header_string, add_special_tokens=False)
# split all cell values into tokens and see how many can be accommodated
used_token_len = len(question_tokens) + len(header_tokens)
# remaining token space for rows
remain_token_len = max_length - used_token_len
value_string = ""
for _, row_example in enumerate(table_content["rows"]):
# use a general index to roughly estimate the overall token len
value_string += self.table_linearize.process_row(row_example, 100) + " "
value_token_len = len(self.tokenize(value_string))
if value_token_len < remain_token_len:
# no row will be deleted
return 0.0, remain_token_len
else:
# calc a roughly delete rate
return 1.0 - remain_token_len / value_token_len, remain_token_len
def delete_unrelated_rows(self, table_content: Dict, question: str, answer: List, delete_ratio: float):
"""
The argument answer is used only during training.
"""
truncated_unrelated_indices = []
related_indices = []
if answer is None or len(answer) == 0:
answer_set = set()
else:
answer_set = {ans_ex.lower() for ans_ex in answer}
# add question key words into answer set
if question is not None:
answer_set.update(question.split())
question_set = set(question.strip("?!.,").split(" "))
row_max_len = len(table_content["rows"])
for _row_idx, row in enumerate(table_content["rows"]):
lower_row = {str(cell).lower() for cell in row}
if len(lower_row & answer_set) == 0 and len(lower_row & question_set) == 0:
truncated_unrelated_indices.append(_row_idx)
else:
# add neighbours to preserve information aggressively
related_indices.extend([_row_idx - 2, _row_idx - 1, _row_idx, _row_idx + 1, _row_idx + 2])
# remove the neighbours
truncated_unrelated_indices = [
_row_idx for _row_idx in truncated_unrelated_indices if _row_idx not in related_indices
]
# select some cases to drop
drop_items = min(len(truncated_unrelated_indices), int(len(table_content["rows"]) * delete_ratio))
drop_row_indices = random.choices(truncated_unrelated_indices, k=drop_items)
for _row_idx in reversed(range(row_max_len)):
if _row_idx in drop_row_indices:
del table_content["rows"][_row_idx]
# only when the drop ratio is too large, logging for warning.
if "id" in table_content and len(drop_row_indices) > 0:
logger.warning("Delete {:.2f} rows in table {}".format(len(drop_row_indices), table_content["id"]))
| 64,999 | 42.712172 | 119 | py |
transformers | transformers-main/src/transformers/models/mvp/modeling_mvp.py | # coding=utf-8
# Copyright 2022 The Fairseq Authors and The HuggingFace Inc. team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
""" PyTorch MVP model."""
import copy
import math
from typing import List, Optional, Tuple, Union
import torch
import torch.utils.checkpoint
from torch import nn
from torch.nn import BCEWithLogitsLoss, CrossEntropyLoss, MSELoss
from ...activations import ACT2FN
from ...modeling_outputs import (
BaseModelOutput,
BaseModelOutputWithPastAndCrossAttentions,
CausalLMOutputWithCrossAttentions,
Seq2SeqLMOutput,
Seq2SeqModelOutput,
Seq2SeqQuestionAnsweringModelOutput,
Seq2SeqSequenceClassifierOutput,
)
from ...modeling_utils import PreTrainedModel
from ...utils import (
add_code_sample_docstrings,
add_end_docstrings,
add_start_docstrings,
add_start_docstrings_to_model_forward,
logging,
replace_return_docstrings,
)
from .configuration_mvp import MvpConfig
logger = logging.get_logger(__name__)
_CHECKPOINT_FOR_DOC = "RUCAIBox/mvp"
_CONFIG_FOR_DOC = "MvpConfig"
# Base model docstring
_EXPECTED_OUTPUT_SHAPE = [1, 8, 1024]
MVP_PRETRAINED_MODEL_ARCHIVE_LIST = [
"RUCAIBox/mvp",
"RUCAIBox/mvp-data-to-text",
"RUCAIBox/mvp-open-dialog",
"RUCAIBox/mvp-question-answering",
"RUCAIBox/mvp-question-generation",
"RUCAIBox/mvp-story",
"RUCAIBox/mvp-summarization",
"RUCAIBox/mvp-task-dialog",
"RUCAIBox/mtl-data-to-text",
"RUCAIBox/mtl-multi-task",
"RUCAIBox/mtl-open-dialog",
"RUCAIBox/mtl-question-answering",
"RUCAIBox/mtl-question-generation",
"RUCAIBox/mtl-story",
"RUCAIBox/mtl-summarization",
# See all MVP models at https://huggingface.co/models?filter=mvp
]
# Copied from transformers.models.bart.modeling_bart.shift_tokens_right
def shift_tokens_right(input_ids: torch.Tensor, pad_token_id: int, decoder_start_token_id: int):
"""
Shift input ids one token to the right.
"""
shifted_input_ids = input_ids.new_zeros(input_ids.shape)
shifted_input_ids[:, 1:] = input_ids[:, :-1].clone()
shifted_input_ids[:, 0] = decoder_start_token_id
if pad_token_id is None:
raise ValueError("self.model.config.pad_token_id has to be defined.")
# replace possible -100 values in labels by `pad_token_id`
shifted_input_ids.masked_fill_(shifted_input_ids == -100, pad_token_id)
return shifted_input_ids
# Copied from transformers.models.bart.modeling_bart._make_causal_mask
def _make_causal_mask(
input_ids_shape: torch.Size, dtype: torch.dtype, device: torch.device, past_key_values_length: int = 0
):
"""
Make causal mask used for bi-directional self-attention.
"""
bsz, tgt_len = input_ids_shape
mask = torch.full((tgt_len, tgt_len), torch.finfo(dtype).min, device=device)
mask_cond = torch.arange(mask.size(-1), device=device)
mask.masked_fill_(mask_cond < (mask_cond + 1).view(mask.size(-1), 1), 0)
mask = mask.to(dtype)
if past_key_values_length > 0:
mask = torch.cat([torch.zeros(tgt_len, past_key_values_length, dtype=dtype, device=device), mask], dim=-1)
return mask[None, None, :, :].expand(bsz, 1, tgt_len, tgt_len + past_key_values_length)
# Copied from transformers.models.bart.modeling_bart._expand_mask
def _expand_mask(mask: torch.Tensor, dtype: torch.dtype, tgt_len: Optional[int] = None):
"""
Expands attention_mask from `[bsz, seq_len]` to `[bsz, 1, tgt_seq_len, src_seq_len]`.
"""
bsz, src_len = mask.size()
tgt_len = tgt_len if tgt_len is not None else src_len
expanded_mask = mask[:, None, None, :].expand(bsz, 1, tgt_len, src_len).to(dtype)
inverted_mask = 1.0 - expanded_mask
return inverted_mask.masked_fill(inverted_mask.to(torch.bool), torch.finfo(dtype).min)
# Copied from transformers.models.bart.modeling_bart.BartLearnedPositionalEmbedding with Bart->MVP
class MvpLearnedPositionalEmbedding(nn.Embedding):
"""
This module learns positional embeddings up to a fixed maximum size.
"""
def __init__(self, num_embeddings: int, embedding_dim: int):
# MVP is set up so that if padding_idx is specified then offset the embedding ids by 2
# and adjust num_embeddings appropriately. Other models don't have this hack
self.offset = 2
super().__init__(num_embeddings + self.offset, embedding_dim)
def forward(self, input_ids: torch.Tensor, past_key_values_length: int = 0):
"""`input_ids' shape is expected to be [bsz x seqlen]."""
bsz, seq_len = input_ids.shape[:2]
positions = torch.arange(
past_key_values_length, past_key_values_length + seq_len, dtype=torch.long, device=self.weight.device
).expand(bsz, -1)
return super().forward(positions + self.offset)
class MvpAttention(nn.Module):
"""Multi-headed attention from 'Attention Is All You Need' paper"""
def __init__(
self,
embed_dim: int,
num_heads: int,
dropout: float = 0.0,
is_decoder: bool = False,
bias: bool = True,
):
super().__init__()
self.embed_dim = embed_dim
self.num_heads = num_heads
self.dropout = dropout
self.head_dim = embed_dim // num_heads
if (self.head_dim * num_heads) != self.embed_dim:
raise ValueError(
f"embed_dim must be divisible by num_heads (got `embed_dim`: {self.embed_dim}"
f" and `num_heads`: {num_heads})."
)
self.scaling = self.head_dim**-0.5
self.is_decoder = is_decoder
self.k_proj = nn.Linear(embed_dim, embed_dim, bias=bias)
self.v_proj = nn.Linear(embed_dim, embed_dim, bias=bias)
self.q_proj = nn.Linear(embed_dim, embed_dim, bias=bias)
self.out_proj = nn.Linear(embed_dim, embed_dim, bias=bias)
def _shape(self, tensor: torch.Tensor, seq_len: int, bsz: int):
return tensor.view(bsz, seq_len, self.num_heads, self.head_dim).transpose(1, 2).contiguous()
def forward(
self,
hidden_states: torch.Tensor,
key_value_states: Optional[torch.Tensor] = None,
past_key_value: Optional[Tuple[torch.Tensor]] = None,
attention_mask: Optional[torch.Tensor] = None,
layer_head_mask: Optional[torch.Tensor] = None,
attn_prompt: Optional[torch.Tensor] = None,
output_attentions: bool = False,
) -> Tuple[torch.Tensor, Optional[torch.Tensor], Optional[Tuple[torch.Tensor]]]:
"""Input shape: Batch x Time x Channel"""
# if key_value_states are provided this layer is used as a cross-attention layer
# for the decoder
is_cross_attention = key_value_states is not None
bsz, tgt_len, _ = hidden_states.size()
# get query proj
query_states = self.q_proj(hidden_states) * self.scaling
# get key, value proj
if is_cross_attention and past_key_value is not None:
# reuse k,v, cross_attentions
key_states = past_key_value[0]
value_states = past_key_value[1]
elif is_cross_attention:
# cross_attentions
key_states = self._shape(self.k_proj(key_value_states), -1, bsz)
value_states = self._shape(self.v_proj(key_value_states), -1, bsz)
elif past_key_value is not None:
# reuse k, v, self_attention
key_states = self._shape(self.k_proj(hidden_states), -1, bsz)
value_states = self._shape(self.v_proj(hidden_states), -1, bsz)
key_states = torch.cat([past_key_value[0], key_states], dim=2)
value_states = torch.cat([past_key_value[1], value_states], dim=2)
else:
# self_attention
key_states = self._shape(self.k_proj(hidden_states), -1, bsz)
value_states = self._shape(self.v_proj(hidden_states), -1, bsz)
if self.is_decoder:
# if cross_attention save Tuple(torch.Tensor, torch.Tensor) of all cross attention key/value_states.
# Further calls to cross_attention layer can then reuse all cross-attention
# key/value_states (first "if" case)
# if uni-directional self-attention (decoder) save Tuple(torch.Tensor, torch.Tensor) of
# all previous decoder key/value_states. Further calls to uni-directional self-attention
# can concat previous decoder key/value_states to current projected key/value_states (third "elif" case)
# if encoder bi-directional self-attention `past_key_value` is always `None`
past_key_value = (key_states, value_states)
if attn_prompt is not None:
key_states = torch.cat([attn_prompt[0].expand(bsz, -1, -1, -1), key_states], dim=2)
value_states = torch.cat([attn_prompt[1].expand(bsz, -1, -1, -1), value_states], dim=2)
if attention_mask is not None:
prompt_mask = torch.zeros(bsz, 1, tgt_len, attn_prompt[0].size(1)).to(attention_mask.device)
attention_mask = torch.cat([prompt_mask, attention_mask], dim=(-1))
proj_shape = (bsz * self.num_heads, -1, self.head_dim)
query_states = self._shape(query_states, tgt_len, bsz).view(*proj_shape)
key_states = key_states.view(*proj_shape)
value_states = value_states.view(*proj_shape)
src_len = key_states.size(1)
attn_weights = torch.bmm(query_states, key_states.transpose(1, 2))
if attn_weights.size() != (bsz * self.num_heads, tgt_len, src_len):
raise ValueError(
f"Attention weights should be of size {(bsz * self.num_heads, tgt_len, src_len)}, but is"
f" {attn_weights.size()}"
)
if attention_mask is not None:
if attention_mask.size() != (bsz, 1, tgt_len, src_len):
raise ValueError(
f"Attention mask should be of size {(bsz, 1, tgt_len, src_len)}, but is {attention_mask.size()}"
)
attn_weights = attn_weights.view(bsz, self.num_heads, tgt_len, src_len) + attention_mask
attn_weights = attn_weights.view(bsz * self.num_heads, tgt_len, src_len)
attn_weights = nn.functional.softmax(attn_weights, dim=-1)
if layer_head_mask is not None:
if layer_head_mask.size() != (self.num_heads,):
raise ValueError(
f"Head mask for a single layer should be of size {(self.num_heads,)}, but is"
f" {layer_head_mask.size()}"
)
attn_weights = layer_head_mask.view(1, -1, 1, 1) * attn_weights.view(bsz, self.num_heads, tgt_len, src_len)
attn_weights = attn_weights.view(bsz * self.num_heads, tgt_len, src_len)
if output_attentions:
# this operation is a bit awkward, but it's required to
# make sure that attn_weights keeps its gradient.
# In order to do so, attn_weights have to be reshaped
# twice and have to be reused in the following
attn_weights_reshaped = attn_weights.view(bsz, self.num_heads, tgt_len, src_len)
attn_weights = attn_weights_reshaped.view(bsz * self.num_heads, tgt_len, src_len)
else:
attn_weights_reshaped = None
attn_probs = nn.functional.dropout(attn_weights, p=self.dropout, training=self.training)
attn_output = torch.bmm(attn_probs, value_states)
if attn_output.size() != (bsz * self.num_heads, tgt_len, self.head_dim):
raise ValueError(
f"`attn_output` should be of size {(bsz, self.num_heads, tgt_len, self.head_dim)}, but is"
f" {attn_output.size()}"
)
attn_output = attn_output.view(bsz, self.num_heads, tgt_len, self.head_dim)
attn_output = attn_output.transpose(1, 2)
# Use the `embed_dim` from the config (stored in the class) rather than `hidden_state` because `attn_output` can be
# partitioned aross GPUs when using tensor-parallelism.
attn_output = attn_output.reshape(bsz, tgt_len, self.embed_dim)
attn_output = self.out_proj(attn_output)
return attn_output, attn_weights_reshaped, past_key_value
class MvpEncoderLayer(nn.Module):
def __init__(self, config: MvpConfig):
super().__init__()
self.embed_dim = config.d_model
self.self_attn = MvpAttention(
embed_dim=self.embed_dim,
num_heads=config.encoder_attention_heads,
dropout=config.attention_dropout,
)
self.self_attn_layer_norm = nn.LayerNorm(self.embed_dim)
self.dropout = config.dropout
self.activation_fn = ACT2FN[config.activation_function]
self.activation_dropout = config.activation_dropout
self.fc1 = nn.Linear(self.embed_dim, config.encoder_ffn_dim)
self.fc2 = nn.Linear(config.encoder_ffn_dim, self.embed_dim)
self.final_layer_norm = nn.LayerNorm(self.embed_dim)
def forward(
self,
hidden_states: torch.FloatTensor,
attention_mask: torch.FloatTensor,
layer_head_mask: torch.FloatTensor,
self_attn_prompt: torch.FloatTensor,
output_attentions: Optional[bool] = False,
) -> Tuple[torch.FloatTensor, Optional[torch.FloatTensor]]:
"""
Args:
hidden_states (`torch.FloatTensor`): input to the layer of shape `(batch, seq_len, embed_dim)`
attention_mask (`torch.FloatTensor`): attention mask of size
`(batch, 1, tgt_len, src_len)` where padding elements are indicated by very large negative values.
layer_head_mask (`torch.FloatTensor`): mask for attention heads in a given layer of size
`(encoder_attention_heads,)`.
self_attn_prompt (`torch.FloatTensor`): prompt of self attention of shape
`(2, encoder_attention_heads, pro_len, head_dim)`.
output_attentions (`bool`, *optional*):
Whether or not to return the attentions tensors of all attention layers. See `attentions` under
returned tensors for more detail.
"""
residual = hidden_states
hidden_states, attn_weights, _ = self.self_attn(
hidden_states=hidden_states,
attention_mask=attention_mask,
layer_head_mask=layer_head_mask,
attn_prompt=self_attn_prompt,
output_attentions=output_attentions,
)
hidden_states = nn.functional.dropout(hidden_states, p=self.dropout, training=self.training)
hidden_states = residual + hidden_states
hidden_states = self.self_attn_layer_norm(hidden_states)
residual = hidden_states
hidden_states = self.activation_fn(self.fc1(hidden_states))
hidden_states = nn.functional.dropout(hidden_states, p=self.activation_dropout, training=self.training)
hidden_states = self.fc2(hidden_states)
hidden_states = nn.functional.dropout(hidden_states, p=self.dropout, training=self.training)
hidden_states = residual + hidden_states
hidden_states = self.final_layer_norm(hidden_states)
if hidden_states.dtype == torch.float16 and (
torch.isinf(hidden_states).any() or torch.isnan(hidden_states).any()
):
clamp_value = torch.finfo(hidden_states.dtype).max - 1000
hidden_states = torch.clamp(hidden_states, min=-clamp_value, max=clamp_value)
outputs = (hidden_states,)
if output_attentions:
outputs += (attn_weights,)
return outputs
class MvpDecoderLayer(nn.Module):
def __init__(self, config: MvpConfig):
super().__init__()
self.embed_dim = config.d_model
self.self_attn = MvpAttention(
embed_dim=self.embed_dim,
num_heads=config.decoder_attention_heads,
dropout=config.attention_dropout,
is_decoder=True,
)
self.dropout = config.dropout
self.activation_fn = ACT2FN[config.activation_function]
self.activation_dropout = config.activation_dropout
self.self_attn_layer_norm = nn.LayerNorm(self.embed_dim)
self.encoder_attn = MvpAttention(
self.embed_dim,
config.decoder_attention_heads,
dropout=config.attention_dropout,
is_decoder=True,
)
self.encoder_attn_layer_norm = nn.LayerNorm(self.embed_dim)
self.fc1 = nn.Linear(self.embed_dim, config.decoder_ffn_dim)
self.fc2 = nn.Linear(config.decoder_ffn_dim, self.embed_dim)
self.final_layer_norm = nn.LayerNorm(self.embed_dim)
def forward(
self,
hidden_states: torch.Tensor,
attention_mask: Optional[torch.Tensor] = None,
encoder_hidden_states: Optional[torch.Tensor] = None,
encoder_attention_mask: Optional[torch.Tensor] = None,
layer_head_mask: Optional[torch.Tensor] = None,
cross_attn_layer_head_mask: Optional[torch.Tensor] = None,
self_attn_prompt: Optional[torch.Tensor] = None,
cross_attn_prompt: Optional[torch.Tensor] = None,
past_key_value: Optional[Tuple[torch.Tensor]] = None,
output_attentions: Optional[bool] = False,
use_cache: Optional[bool] = True,
) -> Tuple[torch.FloatTensor, Optional[Tuple[torch.FloatTensor, torch.FloatTensor]]]:
"""
Args:
hidden_states (`torch.FloatTensor`): input to the layer of shape `(batch, seq_len, embed_dim)`
attention_mask (`torch.FloatTensor`): attention mask of size
`(batch, 1, tgt_len, src_len)` where padding elements are indicated by very large negative values.
encoder_hidden_states (`torch.FloatTensor`):
cross attention input to the layer of shape `(batch, seq_len, embed_dim)`
encoder_attention_mask (`torch.FloatTensor`): encoder attention mask of size
`(batch, 1, tgt_len, src_len)` where padding elements are indicated by very large negative values.
layer_head_mask (`torch.FloatTensor`): mask for attention heads in a given layer of size
`(encoder_attention_heads,)`.
cross_attn_layer_head_mask (`torch.FloatTensor`): mask for cross-attention heads in a given layer of
size `(decoder_attention_heads,)`.
self_attn_prompt (`torch.FloatTensor`): prompt of self attention of shape
`(2, decoder_attention_heads, pro_len, head_dim)`.
cross_attn_prompt (`torch.FloatTensor`): prompt of cross attention of shape
`(2, decoder_attention_heads, pro_len, head_dim)`.
past_key_value (`Tuple(torch.FloatTensor)`): cached past key and value projection states
output_attentions (`bool`, *optional*):
Whether or not to return the attentions tensors of all attention layers. See `attentions` under
returned tensors for more detail.
"""
residual = hidden_states
# Self Attention
# decoder uni-directional self-attention cached key/values tuple is at positions 1,2
self_attn_past_key_value = past_key_value[:2] if past_key_value is not None else None
# add present self-attn cache to positions 1,2 of present_key_value tuple
hidden_states, self_attn_weights, present_key_value = self.self_attn(
hidden_states=hidden_states,
past_key_value=self_attn_past_key_value,
attention_mask=attention_mask,
layer_head_mask=layer_head_mask,
attn_prompt=self_attn_prompt,
output_attentions=output_attentions,
)
hidden_states = nn.functional.dropout(hidden_states, p=self.dropout, training=self.training)
hidden_states = residual + hidden_states
hidden_states = self.self_attn_layer_norm(hidden_states)
# Cross-Attention Block
cross_attn_present_key_value = None
cross_attn_weights = None
if encoder_hidden_states is not None:
residual = hidden_states
# cross_attn cached key/values tuple is at positions 3,4 of present_key_value tuple
cross_attn_past_key_value = past_key_value[-2:] if past_key_value is not None else None
hidden_states, cross_attn_weights, cross_attn_present_key_value = self.encoder_attn(
hidden_states=hidden_states,
key_value_states=encoder_hidden_states,
attention_mask=encoder_attention_mask,
layer_head_mask=cross_attn_layer_head_mask,
attn_prompt=cross_attn_prompt,
past_key_value=cross_attn_past_key_value,
output_attentions=output_attentions,
)
hidden_states = nn.functional.dropout(hidden_states, p=self.dropout, training=self.training)
hidden_states = residual + hidden_states
hidden_states = self.encoder_attn_layer_norm(hidden_states)
# add cross-attn to positions 3,4 of present_key_value tuple
present_key_value = present_key_value + cross_attn_present_key_value
# Fully Connected
residual = hidden_states
hidden_states = self.activation_fn(self.fc1(hidden_states))
hidden_states = nn.functional.dropout(hidden_states, p=self.activation_dropout, training=self.training)
hidden_states = self.fc2(hidden_states)
hidden_states = nn.functional.dropout(hidden_states, p=self.dropout, training=self.training)
hidden_states = residual + hidden_states
hidden_states = self.final_layer_norm(hidden_states)
outputs = (hidden_states,)
if output_attentions:
outputs += (self_attn_weights, cross_attn_weights)
if use_cache:
outputs += (present_key_value,)
return outputs
# Copied from transformers.models.bart.modeling_bart.BartClassificationHead with Bart->MVP
class MvpClassificationHead(nn.Module):
"""Head for sentence-level classification tasks."""
def __init__(
self,
input_dim: int,
inner_dim: int,
num_classes: int,
pooler_dropout: float,
):
super().__init__()
self.dense = nn.Linear(input_dim, inner_dim)
self.dropout = nn.Dropout(p=pooler_dropout)
self.out_proj = nn.Linear(inner_dim, num_classes)
def forward(self, hidden_states: torch.Tensor) -> torch.Tensor:
hidden_states = self.dropout(hidden_states)
hidden_states = self.dense(hidden_states)
hidden_states = torch.tanh(hidden_states)
hidden_states = self.dropout(hidden_states)
hidden_states = self.out_proj(hidden_states)
return hidden_states
class MvpPrompt(nn.Module):
"""Layer-wise prompt for encoder or decoder."""
def __init__(self, config, num_layers, num_heads):
super().__init__()
self.prompt_length = config.prompt_length
self.num_layers = num_layers
self.num_heads = num_heads
self.head_dim = config.d_model // num_heads
self.dropout = nn.Dropout(p=config.dropout)
self.prompt_embedding = nn.Embedding(config.prompt_length, config.d_model)
self.prompt_trans = nn.Sequential(
nn.Linear(config.d_model, config.prompt_mid_dim),
nn.GELU(),
nn.Linear(config.prompt_mid_dim, num_layers * 2 * config.d_model),
)
def forward(self, prompt_ids: torch.Tensor) -> Tuple[torch.Tensor]:
prompt = self.prompt_trans(self.prompt_embedding(prompt_ids))
prompt = prompt.view(self.prompt_length, self.num_layers * 2, self.num_heads, self.head_dim)
prompt = self.dropout(prompt)
prompt = prompt.permute([1, 2, 0, 3]).split(2)
return prompt
class MvpPreTrainedModel(PreTrainedModel):
config_class = MvpConfig
base_model_prefix = "model"
supports_gradient_checkpointing = True
def _init_weights(self, module):
std = self.config.init_std
if isinstance(module, nn.Linear):
module.weight.data.normal_(mean=0.0, std=std)
if module.bias is not None:
module.bias.data.zero_()
elif isinstance(module, nn.Embedding):
module.weight.data.normal_(mean=0.0, std=std)
if module.padding_idx is not None:
module.weight.data[module.padding_idx].zero_()
def _set_gradient_checkpointing(self, module, value=False):
if isinstance(module, (MvpDecoder, MvpEncoder, MvpPrompt)):
module.gradient_checkpointing = value
@property
def dummy_inputs(self):
pad_token = self.config.pad_token_id
input_ids = torch.tensor([[0, 6, 10, 4, 2], [0, 8, 12, 2, pad_token]], device=self.device)
dummy_inputs = {
"attention_mask": input_ids.ne(pad_token),
"input_ids": input_ids,
}
return dummy_inputs
MVP_START_DOCSTRING = r"""
This model inherits from [`PreTrainedModel`]. Check the superclass documentation for the generic methods the
library implements for all its model (such as downloading or saving, resizing the input embeddings, pruning heads
etc.)
This model is also a PyTorch [torch.nn.Module](https://pytorch.org/docs/stable/nn.html#torch.nn.Module) subclass.
Use it as a regular PyTorch Module and refer to the PyTorch documentation for all matter related to general usage
and behavior.
Parameters:
config ([`MvpConfig`]):
Model configuration class with all the parameters of the model. Initializing with a config file does not
load the weights associated with the model, only the configuration. Check out the
[`~PreTrainedModel.from_pretrained`] method to load the model weights.
"""
MVP_INPUTS_DOCSTRING = r"""
Args:
input_ids (`torch.LongTensor` of shape `(batch_size, sequence_length)`):
Indices of input sequence tokens in the vocabulary. Padding will be ignored by default should you provide
it.
Indices can be obtained using [`AutoTokenizer`]. See [`PreTrainedTokenizer.encode`] and
[`PreTrainedTokenizer.__call__`] for details.
[What are input IDs?](../glossary#input-ids)
attention_mask (`torch.Tensor` of shape `(batch_size, sequence_length)`, *optional*):
Mask to avoid performing attention on padding token indices. Mask values selected in `[0, 1]`:
- 1 for tokens that are **not masked**,
- 0 for tokens that are **masked**.
[What are attention masks?](../glossary#attention-mask)
decoder_input_ids (`torch.LongTensor` of shape `(batch_size, target_sequence_length)`, *optional*):
Indices of decoder input sequence tokens in the vocabulary.
Indices can be obtained using [`AutoTokenizer`]. See [`PreTrainedTokenizer.encode`] and
[`PreTrainedTokenizer.__call__`] for details.
[What are decoder input IDs?](../glossary#decoder-input-ids)
Mvp uses the `eos_token_id` as the starting token for `decoder_input_ids` generation. If `past_key_values`
is used, optionally only the last `decoder_input_ids` have to be input (see `past_key_values`).
For translation and summarization training, `decoder_input_ids` should be provided. If no
`decoder_input_ids` is provided, the model will create this tensor by shifting the `input_ids` to the right
for denoising pre-training following the paper.
decoder_attention_mask (`torch.LongTensor` of shape `(batch_size, target_sequence_length)`, *optional*):
Default behavior: generate a tensor that ignores pad tokens in `decoder_input_ids`. Causal mask will also
be used by default.
If you want to change padding behavior, you should read [`modeling_mvp._prepare_decoder_attention_mask`]
and modify to your needs. See diagram 1 in [the paper](https://arxiv.org/abs/1910.13461) for more
information on the default strategy.
head_mask (`torch.Tensor` of shape `(encoder_layers, encoder_attention_heads)`, *optional*):
Mask to nullify selected heads of the attention modules in the encoder. Mask values selected in `[0, 1]`:
- 1 indicates the head is **not masked**,
- 0 indicates the head is **masked**.
decoder_head_mask (`torch.Tensor` of shape `(decoder_layers, decoder_attention_heads)`, *optional*):
Mask to nullify selected heads of the attention modules in the decoder. Mask values selected in `[0, 1]`:
- 1 indicates the head is **not masked**,
- 0 indicates the head is **masked**.
cross_attn_head_mask (`torch.Tensor` of shape `(decoder_layers, decoder_attention_heads)`, *optional*):
Mask to nullify selected heads of the cross-attention modules in the decoder. Mask values selected in `[0,
1]`:
- 1 indicates the head is **not masked**,
- 0 indicates the head is **masked**.
encoder_outputs (`tuple(tuple(torch.FloatTensor)`, *optional*):
Tuple consists of (`last_hidden_state`, *optional*: `hidden_states`, *optional*: `attentions`)
`last_hidden_state` of shape `(batch_size, sequence_length, hidden_size)`, *optional*) is a sequence of
hidden-states at the output of the last layer of the encoder. Used in the cross-attention of the decoder.
past_key_values (`tuple(tuple(torch.FloatTensor))`, *optional*, returned when `use_cache=True` is passed or when `config.use_cache=True`):
Tuple of `tuple(torch.FloatTensor)` of length `config.n_layers`, with each tuple having 2 tensors of shape
`(batch_size, num_heads, sequence_length, embed_size_per_head)`) and 2 additional tensors of shape
`(batch_size, num_heads, encoder_sequence_length, embed_size_per_head)`.
Contains pre-computed hidden-states (key and values in the self-attention blocks and in the cross-attention
blocks) that can be used (see `past_key_values` input) to speed up sequential decoding.
If `past_key_values` are used, the user can optionally input only the last `decoder_input_ids` (those that
don't have their past key value states given to this model) of shape `(batch_size, 1)` instead of all
`decoder_input_ids` of shape `(batch_size, sequence_length)`. inputs_embeds (`torch.FloatTensor` of shape
`(batch_size, sequence_length, hidden_size)`, *optional*): Optionally, instead of passing `input_ids` you
can choose to directly pass an embedded representation. This is useful if you want more control over how to
convert `input_ids` indices into associated vectors than the model's internal embedding lookup matrix.
decoder_inputs_embeds (`torch.FloatTensor` of shape `(batch_size, target_sequence_length, hidden_size)`, *optional*):
Optionally, instead of passing `decoder_input_ids` you can choose to directly pass an embedded
representation. If `past_key_values` is used, optionally only the last `decoder_inputs_embeds` have to be
input (see `past_key_values`). This is useful if you want more control over how to convert
`decoder_input_ids` indices into associated vectors than the model's internal embedding lookup matrix.
If `decoder_input_ids` and `decoder_inputs_embeds` are both unset, `decoder_inputs_embeds` takes the value
of `inputs_embeds`.
use_cache (`bool`, *optional*):
If set to `True`, `past_key_values` key value states are returned and can be used to speed up decoding (see
`past_key_values`).
output_attentions (`bool`, *optional*):
Whether or not to return the attentions tensors of all attention layers. See `attentions` under returned
tensors for more detail.
output_hidden_states (`bool`, *optional*):
Whether or not to return the hidden states of all layers. See `hidden_states` under returned tensors for
more detail.
return_dict (`bool`, *optional*):
Whether or not to return a [`~utils.ModelOutput`] instead of a plain tuple.
"""
MVP_CONDITIONAL_GENERATION_EXAMPLE = r"""
Example of summarization:
Fine-tuning a model
```python
>>> import torch
>>> from transformers import AutoTokenizer, MvpForConditionalGeneration
>>> tokenizer = AutoTokenizer.from_pretrained("RUCAIBox/mvp")
>>> model = MvpForConditionalGeneration.from_pretrained("RUCAIBox/mvp")
>>> inputs = tokenizer(
... "Summarize: You may want to stick it to your boss and leave your job, but don't do it if these are your reasons.",
... return_tensors="pt",
... )
>>> labels = tokenizer("Bad Reasons To Quit Your Job", return_tensors="pt")["input_ids"]
>>> loss = model(**inputs, labels=labels).loss
>>> loss.backward()
```
Inference after the model fine-tuned
```python
>>> with torch.no_grad():
... generated_ids = model.generate(**inputs)
>>> generated_text = tokenizer.batch_decode(generated_ids, skip_special_tokens=True)
```
"""
MVP_SEQUENCE_CLASSIFICATION_SAMPLE = r"""
Example of single-label classification:
Fine-tuning a model on `num_labels` classes
```python
>>> import torch
>>> from transformers import AutoTokenizer, MvpForSequenceClassification
>>> num_labels = 2 # for example, this is a binary classification task
>>> tokenizer = AutoTokenizer.from_pretrained("RUCAIBox/mvp")
>>> model = MvpForSequenceClassification.from_pretrained("RUCAIBox/mvp", num_labels=num_labels)
>>> inputs = tokenizer("Classify: Hello, my dog is cute", return_tensors="pt")
>>> labels = torch.tensor(1) # the real label for inputs
>>> loss = model(**inputs, labels=labels).loss
>>> loss.backward()
```
Inference after the model fine-tuned
```python
>>> with torch.no_grad():
... logits = model(**inputs).logits
>>> predicted_class_id = logits.argmax()
```
"""
MVP_QUESTION_ANSWERING_SAMPLE = r"""
Example:
Fine-tuning a model for extrative question answering, and our model also supports generative question answering
using `BartForConditionalGeneration`
```python
>>> import torch
>>> from transformers import AutoTokenizer, MvpForQuestionAnswering
>>> tokenizer = AutoTokenizer.from_pretrained("RUCAIBox/mvp")
>>> model = MvpForQuestionAnswering.from_pretrained("RUCAIBox/mvp")
>>> inputs = tokenizer(
... "Answer the following question: Who was Jim Henson? [SEP] Jim Henson was a nice puppet",
... return_tensors="pt",
... )
>>> target_start_index = torch.tensor([18])
>>> target_end_index = torch.tensor([19])
>>> loss = model(**inputs, start_positions=target_start_index, end_positions=target_end_index).loss
>>> loss.backward()
```
Inference after the model fine-tuned
```python
>>> with torch.no_grad():
... outputs = model(**inputs)
>>> answer_start_index = outputs.start_logits.argmax()
>>> answer_end_index = outputs.end_logits.argmax()
>>> predict_answer_tokens = inputs.input_ids[0, answer_start_index : answer_end_index + 1]
>>> predict_answer = tokenizer.decode(predict_answer_tokens)
```
"""
class MvpEncoder(MvpPreTrainedModel):
"""
Transformer encoder consisting of *config.encoder_layers* self attention layers. Each layer is a
[`MvpEncoderLayer`].
Args:
config: MvpConfig
embed_tokens (nn.Embedding): output embedding
use_prompt (bool): whether to use prompt
"""
def __init__(
self, config: MvpConfig, embed_tokens: Optional[nn.Embedding] = None, use_prompt: Optional[bool] = False
):
super().__init__(config)
self.dropout = config.dropout
self.layerdrop = config.encoder_layerdrop
embed_dim = config.d_model
self.padding_idx = config.pad_token_id
self.max_source_positions = config.max_position_embeddings
self.embed_scale = math.sqrt(embed_dim) if config.scale_embedding else 1.0
if embed_tokens is not None:
self.embed_tokens = embed_tokens
else:
self.embed_tokens = nn.Embedding(config.vocab_size, embed_dim, self.padding_idx)
self.embed_positions = MvpLearnedPositionalEmbedding(
config.max_position_embeddings,
embed_dim,
)
self.layers = nn.ModuleList([MvpEncoderLayer(config) for _ in range(config.encoder_layers)])
self.layernorm_embedding = nn.LayerNorm(embed_dim)
self.use_prompt = use_prompt
if use_prompt:
self.prompt_length = config.prompt_length
self.self_attn_prompt = MvpPrompt(
config,
config.encoder_layers,
config.encoder_attention_heads,
)
self.gradient_checkpointing = False
# Initialize weights and apply final processing
self.post_init()
def get_input_embeddings(self):
return self.embed_tokens
def set_input_embeddings(self, value):
self.embed_tokens = value
def forward(
self,
input_ids: torch.LongTensor = None,
attention_mask: Optional[torch.Tensor] = None,
head_mask: Optional[torch.Tensor] = None,
inputs_embeds: Optional[torch.FloatTensor] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[Tuple, BaseModelOutput]:
r"""
Args:
input_ids (`torch.LongTensor` of shape `(batch_size, sequence_length)`):
Indices of input sequence tokens in the vocabulary. Padding will be ignored by default should you
provide it.
Indices can be obtained using [`AutoTokenizer`]. See [`PreTrainedTokenizer.encode`] and
[`PreTrainedTokenizer.__call__`] for details.
[What are input IDs?](../glossary#input-ids)
attention_mask (`torch.Tensor` of shape `(batch_size, sequence_length)`, *optional*):
Mask to avoid performing attention on padding token indices. Mask values selected in `[0, 1]`:
- 1 for tokens that are **not masked**,
- 0 for tokens that are **masked**.
[What are attention masks?](../glossary#attention-mask)
head_mask (`torch.Tensor` of shape `(encoder_layers, encoder_attention_heads)`, *optional*):
Mask to nullify selected heads of the attention modules. Mask values selected in `[0, 1]`:
- 1 indicates the head is **not masked**,
- 0 indicates the head is **masked**.
inputs_embeds (`torch.FloatTensor` of shape `(batch_size, sequence_length, hidden_size)`, *optional*):
Optionally, instead of passing `input_ids` you can choose to directly pass an embedded representation.
This is useful if you want more control over how to convert `input_ids` indices into associated vectors
than the model's internal embedding lookup matrix.
output_attentions (`bool`, *optional*):
Whether or not to return the attentions tensors of all attention layers. See `attentions` under
returned tensors for more detail.
output_hidden_states (`bool`, *optional*):
Whether or not to return the hidden states of all layers. See `hidden_states` under returned tensors
for more detail.
return_dict (`bool`, *optional*):
Whether or not to return a [`~utils.ModelOutput`] instead of a plain tuple.
"""
output_attentions = output_attentions if output_attentions is not None else self.config.output_attentions
output_hidden_states = (
output_hidden_states if output_hidden_states is not None else self.config.output_hidden_states
)
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
# retrieve input_ids and inputs_embeds
if input_ids is not None and inputs_embeds is not None:
raise ValueError("You cannot specify both input_ids and inputs_embeds at the same time")
elif input_ids is not None:
input = input_ids
input_shape = input.shape
input_ids = input_ids.view(-1, input_shape[-1])
elif inputs_embeds is not None:
input_shape = inputs_embeds.size()[:-1]
input = inputs_embeds[:, :, -1]
else:
raise ValueError("You have to specify either input_ids or inputs_embeds")
if inputs_embeds is None:
inputs_embeds = self.embed_tokens(input_ids) * self.embed_scale
embed_pos = self.embed_positions(input)
hidden_states = inputs_embeds + embed_pos
hidden_states = self.layernorm_embedding(hidden_states)
hidden_states = nn.functional.dropout(hidden_states, p=self.dropout, training=self.training)
# layer-wise prompt
if self.use_prompt:
prompt_ids = torch.arange(self.prompt_length).to(self.device)
self_attn_prompt = self.self_attn_prompt(prompt_ids)
# expand attention_mask
if attention_mask is not None:
# [bsz, seq_len] -> [bsz, 1, tgt_seq_len, src_seq_len]
attention_mask = _expand_mask(attention_mask, inputs_embeds.dtype)
encoder_states = () if output_hidden_states else None
all_attentions = () if output_attentions else None
# check if head_mask has a correct number of layers specified if desired
if head_mask is not None:
if head_mask.size()[0] != (len(self.layers)):
raise ValueError(
f"The head_mask should be specified for {len(self.layers)} layers, but it is for"
f" {head_mask.size()[0]}."
)
for idx, encoder_layer in enumerate(self.layers):
if output_hidden_states:
encoder_states = encoder_states + (hidden_states,)
# add LayerDrop (see https://arxiv.org/abs/1909.11556 for description)
to_drop = False
if self.training:
dropout_probability = torch.rand([])
if dropout_probability < self.layerdrop: # skip the layer
to_drop = True
if to_drop:
layer_outputs = (None, None)
else:
if self.gradient_checkpointing and self.training:
def create_custom_forward(module):
def custom_forward(*inputs):
return module(*inputs, output_attentions)
return custom_forward
layer_outputs = torch.utils.checkpoint.checkpoint(
create_custom_forward(encoder_layer),
hidden_states,
attention_mask,
(head_mask[idx] if head_mask is not None else None),
(self_attn_prompt[idx] if self.use_prompt else None),
)
else:
layer_outputs = encoder_layer(
hidden_states,
attention_mask,
layer_head_mask=(head_mask[idx] if head_mask is not None else None),
self_attn_prompt=(self_attn_prompt[idx] if self.use_prompt else None),
output_attentions=output_attentions,
)
hidden_states = layer_outputs[0]
if output_attentions:
all_attentions = all_attentions + (layer_outputs[1],)
if output_hidden_states:
encoder_states = encoder_states + (hidden_states,)
if not return_dict:
return tuple(v for v in [hidden_states, encoder_states, all_attentions] if v is not None)
return BaseModelOutput(
last_hidden_state=hidden_states, hidden_states=encoder_states, attentions=all_attentions
)
class MvpDecoder(MvpPreTrainedModel):
"""
Transformer decoder consisting of *config.decoder_layers* layers. Each layer is a [`MvpDecoderLayer`]
Args:
config: MvpConfig
embed_tokens (nn.Embedding): output embedding
use_prompt (bool): whether to use prompt
"""
def __init__(
self, config: MvpConfig, embed_tokens: Optional[nn.Embedding] = None, use_prompt: Optional[bool] = False
):
super().__init__(config)
self.dropout = config.dropout
self.layerdrop = config.decoder_layerdrop
self.padding_idx = config.pad_token_id
self.max_target_positions = config.max_position_embeddings
self.embed_scale = math.sqrt(config.d_model) if config.scale_embedding else 1.0
if embed_tokens is not None:
self.embed_tokens = embed_tokens
else:
self.embed_tokens = nn.Embedding(config.vocab_size, config.d_model, self.padding_idx)
self.embed_positions = MvpLearnedPositionalEmbedding(
config.max_position_embeddings,
config.d_model,
)
self.layers = nn.ModuleList([MvpDecoderLayer(config) for _ in range(config.decoder_layers)])
self.layernorm_embedding = nn.LayerNorm(config.d_model)
self.use_prompt = use_prompt
if use_prompt:
self.prompt_length = config.prompt_length
self.self_attn_prompt = MvpPrompt(
config,
config.decoder_layers,
config.decoder_attention_heads,
)
self.cross_attn_prompt = MvpPrompt(
config,
config.decoder_layers,
config.decoder_attention_heads,
)
self.gradient_checkpointing = False
# Initialize weights and apply final processing
self.post_init()
def get_input_embeddings(self):
return self.embed_tokens
def set_input_embeddings(self, value):
self.embed_tokens = value
def _prepare_decoder_attention_mask(self, attention_mask, input_shape, inputs_embeds, past_key_values_length):
# create causal mask
# [bsz, seq_len] -> [bsz, 1, tgt_seq_len, src_seq_len]
combined_attention_mask = None
if input_shape[-1] > 1:
combined_attention_mask = _make_causal_mask(
input_shape,
inputs_embeds.dtype,
device=inputs_embeds.device,
past_key_values_length=past_key_values_length,
)
if attention_mask is not None:
# [bsz, seq_len] -> [bsz, 1, tgt_seq_len, src_seq_len]
expanded_attn_mask = _expand_mask(attention_mask, inputs_embeds.dtype, tgt_len=input_shape[-1])
combined_attention_mask = (
expanded_attn_mask if combined_attention_mask is None else expanded_attn_mask + combined_attention_mask
)
return combined_attention_mask
def forward(
self,
input_ids: torch.LongTensor = None,
attention_mask: Optional[torch.Tensor] = None,
encoder_hidden_states: Optional[torch.FloatTensor] = None,
encoder_attention_mask: Optional[torch.LongTensor] = None,
head_mask: Optional[torch.Tensor] = None,
cross_attn_head_mask: Optional[torch.Tensor] = None,
past_key_values: Optional[List[torch.FloatTensor]] = None,
inputs_embeds: Optional[torch.FloatTensor] = None,
use_cache: Optional[bool] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[Tuple, BaseModelOutputWithPastAndCrossAttentions]:
r"""
Args:
input_ids (`torch.LongTensor` of shape `(batch_size, sequence_length)`):
Indices of input sequence tokens in the vocabulary. Padding will be ignored by default should you
provide it.
Indices can be obtained using [`AutoTokenizer`]. See [`PreTrainedTokenizer.encode`] and
[`PreTrainedTokenizer.__call__`] for details.
[What are input IDs?](../glossary#input-ids)
attention_mask (`torch.Tensor` of shape `(batch_size, sequence_length)`, *optional*):
Mask to avoid performing attention on padding token indices. Mask values selected in `[0, 1]`:
- 1 for tokens that are **not masked**,
- 0 for tokens that are **masked**.
[What are attention masks?](../glossary#attention-mask)
encoder_hidden_states (`torch.FloatTensor` of shape `(batch_size, encoder_sequence_length, hidden_size)`, *optional*):
Sequence of hidden-states at the output of the last layer of the encoder. Used in the cross-attention
of the decoder.
encoder_attention_mask (`torch.LongTensor` of shape `(batch_size, encoder_sequence_length)`, *optional*):
Mask to avoid performing cross-attention on padding tokens indices of encoder input_ids. Mask values
selected in `[0, 1]`:
- 1 for tokens that are **not masked**,
- 0 for tokens that are **masked**.
[What are attention masks?](../glossary#attention-mask)
head_mask (`torch.Tensor` of shape `(decoder_layers, decoder_attention_heads)`, *optional*):
Mask to nullify selected heads of the attention modules. Mask values selected in `[0, 1]`:
- 1 indicates the head is **not masked**,
- 0 indicates the head is **masked**.
cross_attn_head_mask (`torch.Tensor` of shape `(decoder_layers, decoder_attention_heads)`, *optional*):
Mask to nullify selected heads of the cross-attention modules in the decoder to avoid performing
cross-attention on hidden heads. Mask values selected in `[0, 1]`:
- 1 indicates the head is **not masked**,
- 0 indicates the head is **masked**.
past_key_values (`tuple(tuple(torch.FloatTensor))`, *optional*, returned when `use_cache=True` is passed or when `config.use_cache=True`):
Tuple of `tuple(torch.FloatTensor)` of length `config.n_layers`, with each tuple having 2 tensors of
shape `(batch_size, num_heads, sequence_length, embed_size_per_head)`) and 2 additional tensors of
shape `(batch_size, num_heads, encoder_sequence_length, embed_size_per_head)`.
Contains pre-computed hidden-states (key and values in the self-attention blocks and in the
cross-attention blocks) that can be used (see `past_key_values` input) to speed up sequential decoding.
If `past_key_values` are used, the user can optionally input only the last `decoder_input_ids` (those
that don't have their past key value states given to this model) of shape `(batch_size, 1)` instead of
all `decoder_input_ids` of shape `(batch_size, sequence_length)`. inputs_embeds (`torch.FloatTensor` of
shape `(batch_size, sequence_length, hidden_size)`, *optional*): Optionally, instead of passing
`input_ids` you can choose to directly pass an embedded representation. This is useful if you want more
control over how to convert `input_ids` indices into associated vectors than the model's internal
embedding lookup matrix.
output_attentions (`bool`, *optional*):
Whether or not to return the attentions tensors of all attention layers. See `attentions` under
returned tensors for more detail.
output_hidden_states (`bool`, *optional*):
Whether or not to return the hidden states of all layers. See `hidden_states` under returned tensors
for more detail.
return_dict (`bool`, *optional*):
Whether or not to return a [`~utils.ModelOutput`] instead of a plain tuple.
"""
output_attentions = output_attentions if output_attentions is not None else self.config.output_attentions
output_hidden_states = (
output_hidden_states if output_hidden_states is not None else self.config.output_hidden_states
)
use_cache = use_cache if use_cache is not None else self.config.use_cache
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
# retrieve input_ids and inputs_embeds
if input_ids is not None and inputs_embeds is not None:
raise ValueError("You cannot specify both decoder_input_ids and decoder_inputs_embeds at the same time")
elif input_ids is not None:
input = input_ids
input_shape = input_ids.shape
input_ids = input_ids.view(-1, input_shape[-1])
elif inputs_embeds is not None:
input_shape = inputs_embeds.size()[:-1]
input = inputs_embeds[:, :, -1]
else:
raise ValueError("You have to specify either decoder_input_ids or decoder_inputs_embeds")
# past_key_values_length
past_key_values_length = past_key_values[0][0].shape[2] if past_key_values is not None else 0
if inputs_embeds is None:
inputs_embeds = self.embed_tokens(input_ids) * self.embed_scale
attention_mask = self._prepare_decoder_attention_mask(
attention_mask, input_shape, inputs_embeds, past_key_values_length
)
# expand encoder attention mask
if encoder_hidden_states is not None and encoder_attention_mask is not None:
# [bsz, seq_len] -> [bsz, 1, tgt_seq_len, src_seq_len]
encoder_attention_mask = _expand_mask(encoder_attention_mask, inputs_embeds.dtype, tgt_len=input_shape[-1])
# embed positions
positions = self.embed_positions(input, past_key_values_length)
hidden_states = inputs_embeds + positions
hidden_states = self.layernorm_embedding(hidden_states)
hidden_states = nn.functional.dropout(hidden_states, p=self.dropout, training=self.training)
# layer-wise prompt
if self.use_prompt:
prompt_ids = torch.arange(self.prompt_length).to(self.device)
self_attn_prompt = self.self_attn_prompt(prompt_ids)
cross_attn_prompt = self.cross_attn_prompt(prompt_ids)
if self.gradient_checkpointing and self.training:
if use_cache:
logger.warning_once(
"`use_cache=True` is incompatible with gradient checkpointing. Setting `use_cache=False`..."
)
use_cache = False
# decoder layers
all_hidden_states = () if output_hidden_states else None
all_self_attns = () if output_attentions else None
all_cross_attentions = () if (output_attentions and encoder_hidden_states is not None) else None
next_decoder_cache = () if use_cache else None
# check if head_mask/cross_attn_head_mask has a correct number of layers specified if desired
for attn_mask, mask_name in zip([head_mask, cross_attn_head_mask], ["head_mask", "cross_attn_head_mask"]):
if attn_mask is not None:
if attn_mask.size()[0] != (len(self.layers)):
raise ValueError(
f"The `{mask_name}` should be specified for {len(self.layers)} layers, but it is for"
f" {head_mask.size()[0]}."
)
for idx, decoder_layer in enumerate(self.layers):
# add LayerDrop (see https://arxiv.org/abs/1909.11556 for description)
if output_hidden_states:
all_hidden_states += (hidden_states,)
if self.training:
dropout_probability = torch.rand([])
if dropout_probability < self.layerdrop:
continue
past_key_value = past_key_values[idx] if past_key_values is not None else None
if self.gradient_checkpointing and self.training:
def create_custom_forward(module):
def custom_forward(*inputs):
# None for past_key_value
return module(*inputs, output_attentions, use_cache)
return custom_forward
layer_outputs = torch.utils.checkpoint.checkpoint(
create_custom_forward(decoder_layer),
hidden_states,
attention_mask,
encoder_hidden_states,
encoder_attention_mask,
head_mask[idx] if head_mask is not None else None,
cross_attn_head_mask[idx] if cross_attn_head_mask is not None else None,
self_attn_prompt[idx] if self.use_prompt else None,
cross_attn_prompt[idx] if self.use_prompt else None,
None,
)
else:
layer_outputs = decoder_layer(
hidden_states,
attention_mask=attention_mask,
encoder_hidden_states=encoder_hidden_states,
encoder_attention_mask=encoder_attention_mask,
layer_head_mask=(head_mask[idx] if head_mask is not None else None),
cross_attn_layer_head_mask=(
cross_attn_head_mask[idx] if cross_attn_head_mask is not None else None
),
self_attn_prompt=(self_attn_prompt[idx] if self.use_prompt else None),
cross_attn_prompt=(cross_attn_prompt[idx] if self.use_prompt else None),
past_key_value=past_key_value,
output_attentions=output_attentions,
use_cache=use_cache,
)
hidden_states = layer_outputs[0]
if use_cache:
next_decoder_cache += (layer_outputs[3 if output_attentions else 1],)
if output_attentions:
all_self_attns += (layer_outputs[1],)
if encoder_hidden_states is not None:
all_cross_attentions += (layer_outputs[2],)
# add hidden states from the last decoder layer
if output_hidden_states:
all_hidden_states += (hidden_states,)
next_cache = next_decoder_cache if use_cache else None
if not return_dict:
return tuple(
v
for v in [hidden_states, next_cache, all_hidden_states, all_self_attns, all_cross_attentions]
if v is not None
)
return BaseModelOutputWithPastAndCrossAttentions(
last_hidden_state=hidden_states,
past_key_values=next_cache,
hidden_states=all_hidden_states,
attentions=all_self_attns,
cross_attentions=all_cross_attentions,
)
@add_start_docstrings(
"The bare MVP Model outputting raw hidden-states without any specific head on top.",
MVP_START_DOCSTRING,
)
class MvpModel(MvpPreTrainedModel):
_keys_to_ignore_on_load_unexpected = ["final_logits_bias"]
_tied_weights_keys = ["encoder.embed_tokens.weight", "decoder.embed_tokens.weight"]
def __init__(self, config: MvpConfig):
super().__init__(config)
padding_idx, vocab_size = config.pad_token_id, config.vocab_size
self.use_prompt = config.use_prompt
self.shared = nn.Embedding(vocab_size, config.d_model, padding_idx)
self.encoder = MvpEncoder(config, self.shared, config.use_prompt)
self.decoder = MvpDecoder(config, self.shared, config.use_prompt)
# Initialize weights and apply final processing
self.post_init()
def get_input_embeddings(self):
return self.shared
def set_input_embeddings(self, value):
self.shared = value
self.encoder.embed_tokens = self.shared
self.decoder.embed_tokens = self.shared
def get_encoder(self):
return self.encoder
def get_decoder(self):
return self.decoder
def set_lightweight_tuning(self):
assert self.use_prompt, "If you want to use lightweight tuning, make sure that `use_prompt=True`."
self.requires_grad_(False)
self.encoder.self_attn_prompt.requires_grad_(True)
self.decoder.self_attn_prompt.requires_grad_(True)
self.decoder.cross_attn_prompt.requires_grad_(True)
@add_start_docstrings_to_model_forward(MVP_INPUTS_DOCSTRING)
@add_code_sample_docstrings(
checkpoint=_CHECKPOINT_FOR_DOC,
output_type=Seq2SeqModelOutput,
config_class=_CONFIG_FOR_DOC,
expected_output=_EXPECTED_OUTPUT_SHAPE,
)
def forward(
self,
input_ids: torch.LongTensor = None,
attention_mask: Optional[torch.Tensor] = None,
decoder_input_ids: Optional[torch.LongTensor] = None,
decoder_attention_mask: Optional[torch.LongTensor] = None,
head_mask: Optional[torch.Tensor] = None,
decoder_head_mask: Optional[torch.Tensor] = None,
cross_attn_head_mask: Optional[torch.Tensor] = None,
encoder_outputs: Optional[List[torch.FloatTensor]] = None,
past_key_values: Optional[List[torch.FloatTensor]] = None,
inputs_embeds: Optional[torch.FloatTensor] = None,
decoder_inputs_embeds: Optional[torch.FloatTensor] = None,
use_cache: Optional[bool] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[Tuple, Seq2SeqModelOutput]:
# different to other models, Mvp automatically creates decoder_input_ids from
# input_ids if no decoder_input_ids are provided
if decoder_input_ids is None and decoder_inputs_embeds is None:
if input_ids is None:
raise ValueError(
"If no `decoder_input_ids` or `decoder_inputs_embeds` are "
"passed, `input_ids` cannot be `None`. Please pass either "
"`input_ids` or `decoder_input_ids` or `decoder_inputs_embeds`."
)
decoder_input_ids = shift_tokens_right(
input_ids, self.config.pad_token_id, self.config.decoder_start_token_id
)
output_attentions = output_attentions if output_attentions is not None else self.config.output_attentions
output_hidden_states = (
output_hidden_states if output_hidden_states is not None else self.config.output_hidden_states
)
use_cache = use_cache if use_cache is not None else self.config.use_cache
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
if encoder_outputs is None:
encoder_outputs = self.encoder(
input_ids=input_ids,
attention_mask=attention_mask,
head_mask=head_mask,
inputs_embeds=inputs_embeds,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
# If the user passed a tuple for encoder_outputs, we wrap it in a BaseModelOutput when return_dict=True
elif return_dict and not isinstance(encoder_outputs, BaseModelOutput):
encoder_outputs = BaseModelOutput(
last_hidden_state=encoder_outputs[0],
hidden_states=encoder_outputs[1] if len(encoder_outputs) > 1 else None,
attentions=encoder_outputs[2] if len(encoder_outputs) > 2 else None,
)
# decoder outputs consists of (dec_features, past_key_value, dec_hidden, dec_attn)
decoder_outputs = self.decoder(
input_ids=decoder_input_ids,
attention_mask=decoder_attention_mask,
encoder_hidden_states=encoder_outputs[0],
encoder_attention_mask=attention_mask,
head_mask=decoder_head_mask,
cross_attn_head_mask=cross_attn_head_mask,
past_key_values=past_key_values,
inputs_embeds=decoder_inputs_embeds,
use_cache=use_cache,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
if not return_dict:
return decoder_outputs + encoder_outputs
return Seq2SeqModelOutput(
last_hidden_state=decoder_outputs.last_hidden_state,
past_key_values=decoder_outputs.past_key_values,
decoder_hidden_states=decoder_outputs.hidden_states,
decoder_attentions=decoder_outputs.attentions,
cross_attentions=decoder_outputs.cross_attentions,
encoder_last_hidden_state=encoder_outputs.last_hidden_state,
encoder_hidden_states=encoder_outputs.hidden_states,
encoder_attentions=encoder_outputs.attentions,
)
@add_start_docstrings(
"The MVP Model with a language modeling head. Can be used for various text generation tasks.", MVP_START_DOCSTRING
)
class MvpForConditionalGeneration(MvpPreTrainedModel):
_tied_weights_keys = ["encoder.embed_tokens.weight", "decoder.embed_tokens.weight", "lm_head.weight"]
def __init__(self, config: MvpConfig):
super().__init__(config)
self.model = MvpModel(config)
self.register_buffer("final_logits_bias", torch.zeros((1, self.model.shared.num_embeddings)))
self.lm_head = nn.Linear(config.d_model, self.model.shared.num_embeddings, bias=False)
# Initialize weights and apply final processing
self.post_init()
def get_encoder(self):
return self.model.get_encoder()
def get_decoder(self):
return self.model.get_decoder()
def resize_token_embeddings(self, new_num_tokens: int) -> nn.Embedding:
new_embeddings = super().resize_token_embeddings(new_num_tokens)
self._resize_final_logits_bias(new_num_tokens)
return new_embeddings
def _resize_final_logits_bias(self, new_num_tokens: int) -> None:
old_num_tokens = self.final_logits_bias.shape[-1]
if new_num_tokens <= old_num_tokens:
new_bias = self.final_logits_bias[:, :new_num_tokens]
else:
extra_bias = torch.zeros((1, new_num_tokens - old_num_tokens), device=self.final_logits_bias.device)
new_bias = torch.cat([self.final_logits_bias, extra_bias], dim=1)
self.register_buffer("final_logits_bias", new_bias)
def get_output_embeddings(self):
return self.lm_head
def set_output_embeddings(self, new_embeddings):
self.lm_head = new_embeddings
def set_lightweight_tuning(self):
self.model.set_lightweight_tuning()
self.lm_head.requires_grad_(False)
@add_start_docstrings_to_model_forward(MVP_INPUTS_DOCSTRING)
@replace_return_docstrings(output_type=Seq2SeqLMOutput, config_class=_CONFIG_FOR_DOC)
@add_end_docstrings(MVP_CONDITIONAL_GENERATION_EXAMPLE)
def forward(
self,
input_ids: torch.LongTensor = None,
attention_mask: Optional[torch.Tensor] = None,
decoder_input_ids: Optional[torch.LongTensor] = None,
decoder_attention_mask: Optional[torch.LongTensor] = None,
head_mask: Optional[torch.Tensor] = None,
decoder_head_mask: Optional[torch.Tensor] = None,
cross_attn_head_mask: Optional[torch.Tensor] = None,
encoder_outputs: Optional[List[torch.FloatTensor]] = None,
past_key_values: Optional[List[torch.FloatTensor]] = None,
inputs_embeds: Optional[torch.FloatTensor] = None,
decoder_inputs_embeds: Optional[torch.FloatTensor] = None,
labels: Optional[torch.LongTensor] = None,
use_cache: Optional[bool] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[Tuple, Seq2SeqLMOutput]:
r"""
labels (`torch.LongTensor` of shape `(batch_size, sequence_length)`, *optional*):
Labels for computing the masked language modeling loss. Indices should either be in `[0, ...,
config.vocab_size]` or -100 (see `input_ids` docstring). Tokens with indices set to `-100` are ignored
(masked), the loss is only computed for the tokens with labels in `[0, ..., config.vocab_size]`.
Returns:
"""
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
if labels is not None:
if use_cache:
logger.warning("The `use_cache` argument is changed to `False` since `labels` is provided.")
use_cache = False
if decoder_input_ids is None and decoder_inputs_embeds is None:
decoder_input_ids = shift_tokens_right(
labels, self.config.pad_token_id, self.config.decoder_start_token_id
)
outputs = self.model(
input_ids,
attention_mask=attention_mask,
decoder_input_ids=decoder_input_ids,
encoder_outputs=encoder_outputs,
decoder_attention_mask=decoder_attention_mask,
head_mask=head_mask,
decoder_head_mask=decoder_head_mask,
cross_attn_head_mask=cross_attn_head_mask,
past_key_values=past_key_values,
inputs_embeds=inputs_embeds,
decoder_inputs_embeds=decoder_inputs_embeds,
use_cache=use_cache,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
lm_logits = self.lm_head(outputs[0]) + self.final_logits_bias
masked_lm_loss = None
if labels is not None:
loss_fct = CrossEntropyLoss()
masked_lm_loss = loss_fct(lm_logits.view(-1, self.config.vocab_size), labels.view(-1))
if not return_dict:
output = (lm_logits,) + outputs[1:]
return ((masked_lm_loss,) + output) if masked_lm_loss is not None else output
return Seq2SeqLMOutput(
loss=masked_lm_loss,
logits=lm_logits,
past_key_values=outputs.past_key_values,
decoder_hidden_states=outputs.decoder_hidden_states,
decoder_attentions=outputs.decoder_attentions,
cross_attentions=outputs.cross_attentions,
encoder_last_hidden_state=outputs.encoder_last_hidden_state,
encoder_hidden_states=outputs.encoder_hidden_states,
encoder_attentions=outputs.encoder_attentions,
)
def prepare_inputs_for_generation(
self,
decoder_input_ids,
past_key_values=None,
attention_mask=None,
head_mask=None,
decoder_head_mask=None,
cross_attn_head_mask=None,
use_cache=None,
encoder_outputs=None,
**kwargs,
):
# cut decoder_input_ids if past is used
if past_key_values is not None:
decoder_input_ids = decoder_input_ids[:, -1:]
return {
"input_ids": None, # encoder_outputs is defined. input_ids not needed
"encoder_outputs": encoder_outputs,
"past_key_values": past_key_values,
"decoder_input_ids": decoder_input_ids,
"attention_mask": attention_mask,
"head_mask": head_mask,
"decoder_head_mask": decoder_head_mask,
"cross_attn_head_mask": cross_attn_head_mask,
"use_cache": use_cache, # change this to avoid caching (presumably for debugging)
}
def prepare_decoder_input_ids_from_labels(self, labels: torch.Tensor):
return shift_tokens_right(labels, self.config.pad_token_id, self.config.decoder_start_token_id)
@staticmethod
def _reorder_cache(past_key_values, beam_idx):
reordered_past = ()
for layer_past in past_key_values:
# cached cross_attention states don't have to be reordered -> they are always the same
reordered_past += (
tuple(past_state.index_select(0, beam_idx) for past_state in layer_past[:2]) + layer_past[2:],
)
return reordered_past
@add_start_docstrings(
"""
Mvp model with a sequence classification/head on top (a linear layer on top of the pooled output) e.g. for GLUE
tasks.
""",
MVP_START_DOCSTRING,
)
class MvpForSequenceClassification(MvpPreTrainedModel):
_tied_weights_keys = ["encoder.embed_tokens.weight", "decoder.embed_tokens.weight"]
def __init__(self, config: MvpConfig, **kwargs):
super().__init__(config, **kwargs)
self.model = MvpModel(config)
self.classification_head = MvpClassificationHead(
config.d_model,
config.d_model,
config.num_labels,
config.classifier_dropout,
)
# Initialize weights and apply final processing
self.post_init()
def set_lightweight_tuning(self):
self.model.set_lightweight_tuning()
self.classification_head.requires_grad_(False)
@add_start_docstrings_to_model_forward(MVP_INPUTS_DOCSTRING)
@add_end_docstrings(MVP_SEQUENCE_CLASSIFICATION_SAMPLE)
def forward(
self,
input_ids: torch.LongTensor = None,
attention_mask: Optional[torch.Tensor] = None,
decoder_input_ids: Optional[torch.LongTensor] = None,
decoder_attention_mask: Optional[torch.LongTensor] = None,
head_mask: Optional[torch.Tensor] = None,
decoder_head_mask: Optional[torch.Tensor] = None,
cross_attn_head_mask: Optional[torch.Tensor] = None,
encoder_outputs: Optional[List[torch.FloatTensor]] = None,
inputs_embeds: Optional[torch.FloatTensor] = None,
decoder_inputs_embeds: Optional[torch.FloatTensor] = None,
labels: Optional[torch.LongTensor] = None,
use_cache: Optional[bool] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[Tuple, Seq2SeqSequenceClassifierOutput]:
r"""
labels (`torch.LongTensor` of shape `(batch_size,)`, *optional*):
Labels for computing the sequence classification/regression loss. Indices should be in `[0, ...,
config.num_labels - 1]`. If `config.num_labels > 1` a classification loss is computed (Cross-Entropy).
"""
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
if labels is not None:
use_cache = False
if input_ids is None and inputs_embeds is not None:
raise NotImplementedError(
f"Passing input embeddings is currently not supported for {self.__class__.__name__}"
)
outputs = self.model(
input_ids,
attention_mask=attention_mask,
decoder_input_ids=decoder_input_ids,
decoder_attention_mask=decoder_attention_mask,
head_mask=head_mask,
decoder_head_mask=decoder_head_mask,
cross_attn_head_mask=cross_attn_head_mask,
encoder_outputs=encoder_outputs,
inputs_embeds=inputs_embeds,
decoder_inputs_embeds=decoder_inputs_embeds,
use_cache=use_cache,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
hidden_states = outputs[0] # last hidden state
eos_mask = input_ids.eq(self.config.eos_token_id).to(hidden_states.device)
if len(torch.unique_consecutive(eos_mask.sum(1))) > 1:
raise ValueError("All examples must have the same number of <eos> tokens.")
sentence_representation = hidden_states[eos_mask, :].view(hidden_states.size(0), -1, hidden_states.size(-1))[
:, -1, :
]
logits = self.classification_head(sentence_representation)
loss = None
if labels is not None:
if self.config.problem_type is None:
if self.config.num_labels == 1:
self.config.problem_type = "regression"
elif self.config.num_labels > 1 and (labels.dtype == torch.long or labels.dtype == torch.int):
self.config.problem_type = "single_label_classification"
else:
self.config.problem_type = "multi_label_classification"
if self.config.problem_type == "regression":
loss_fct = MSELoss()
if self.config.num_labels == 1:
loss = loss_fct(logits.squeeze(), labels.squeeze())
else:
loss = loss_fct(logits, labels)
elif self.config.problem_type == "single_label_classification":
loss_fct = CrossEntropyLoss()
loss = loss_fct(logits.view(-1, self.config.num_labels), labels.view(-1))
elif self.config.problem_type == "multi_label_classification":
loss_fct = BCEWithLogitsLoss()
loss = loss_fct(logits, labels)
if not return_dict:
output = (logits,) + outputs[1:]
return ((loss,) + output) if loss is not None else output
return Seq2SeqSequenceClassifierOutput(
loss=loss,
logits=logits,
past_key_values=outputs.past_key_values,
decoder_hidden_states=outputs.decoder_hidden_states,
decoder_attentions=outputs.decoder_attentions,
cross_attentions=outputs.cross_attentions,
encoder_last_hidden_state=outputs.encoder_last_hidden_state,
encoder_hidden_states=outputs.encoder_hidden_states,
encoder_attentions=outputs.encoder_attentions,
)
@add_start_docstrings(
"""
MVP Model with a span classification head on top for extractive question-answering tasks like SQuAD (a linear layer
on top of the hidden-states output to compute `span start logits` and `span end logits`).
""",
MVP_START_DOCSTRING,
)
class MvpForQuestionAnswering(MvpPreTrainedModel):
_tied_weights_keys = ["encoder.embed_tokens.weight", "decoder.embed_tokens.weight"]
def __init__(self, config):
super().__init__(config)
config.num_labels = 2
self.num_labels = config.num_labels
self.model = MvpModel(config)
self.qa_outputs = nn.Linear(config.hidden_size, config.num_labels)
# Initialize weights and apply final processing
self.post_init()
def set_lightweight_tuning(self):
self.model.set_lightweight_tuning()
self.qa_outputs.requires_grad_(False)
@add_start_docstrings_to_model_forward(MVP_INPUTS_DOCSTRING)
@add_end_docstrings(MVP_QUESTION_ANSWERING_SAMPLE)
def forward(
self,
input_ids: torch.Tensor = None,
attention_mask: Optional[torch.Tensor] = None,
decoder_input_ids: Optional[torch.LongTensor] = None,
decoder_attention_mask: Optional[torch.LongTensor] = None,
head_mask: Optional[torch.Tensor] = None,
decoder_head_mask: Optional[torch.Tensor] = None,
cross_attn_head_mask: Optional[torch.Tensor] = None,
encoder_outputs: Optional[List[torch.FloatTensor]] = None,
start_positions: Optional[torch.LongTensor] = None,
end_positions: Optional[torch.LongTensor] = None,
inputs_embeds: Optional[torch.FloatTensor] = None,
decoder_inputs_embeds: Optional[torch.FloatTensor] = None,
use_cache: Optional[bool] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[Tuple, Seq2SeqQuestionAnsweringModelOutput]:
r"""
start_positions (`torch.LongTensor` of shape `(batch_size,)`, *optional*):
Labels for position (index) of the start of the labelled span for computing the token classification loss.
Positions are clamped to the length of the sequence (*sequence_length*). Position outside of the sequence
are not taken into account for computing the loss.
end_positions (`torch.LongTensor` of shape `(batch_size,)`, *optional*):
Labels for position (index) of the end of the labelled span for computing the token classification loss.
Positions are clamped to the length of the sequence (*sequence_length*). Position outside of the sequence
are not taken into account for computing the loss.
"""
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
if start_positions is not None and end_positions is not None:
use_cache = False
outputs = self.model(
input_ids,
attention_mask=attention_mask,
decoder_input_ids=decoder_input_ids,
decoder_attention_mask=decoder_attention_mask,
head_mask=head_mask,
decoder_head_mask=decoder_head_mask,
cross_attn_head_mask=cross_attn_head_mask,
encoder_outputs=encoder_outputs,
inputs_embeds=inputs_embeds,
decoder_inputs_embeds=decoder_inputs_embeds,
use_cache=use_cache,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
sequence_output = outputs[0]
logits = self.qa_outputs(sequence_output)
start_logits, end_logits = logits.split(1, dim=-1)
start_logits = start_logits.squeeze(-1).contiguous()
end_logits = end_logits.squeeze(-1).contiguous()
total_loss = None
if start_positions is not None and end_positions is not None:
# If we are on multi-GPU, split add a dimension
if len(start_positions.size()) > 1:
start_positions = start_positions.squeeze(-1)
if len(end_positions.size()) > 1:
end_positions = end_positions.squeeze(-1)
# sometimes the start/end positions are outside our model inputs, we ignore these terms
ignored_index = start_logits.size(1)
start_positions = start_positions.clamp(0, ignored_index)
end_positions = end_positions.clamp(0, ignored_index)
loss_fct = CrossEntropyLoss(ignore_index=ignored_index)
start_loss = loss_fct(start_logits, start_positions)
end_loss = loss_fct(end_logits, end_positions)
total_loss = (start_loss + end_loss) / 2
if not return_dict:
output = (
start_logits,
end_logits,
) + outputs[1:]
return ((total_loss,) + output) if total_loss is not None else output
return Seq2SeqQuestionAnsweringModelOutput(
loss=total_loss,
start_logits=start_logits,
end_logits=end_logits,
past_key_values=outputs.past_key_values,
decoder_hidden_states=outputs.decoder_hidden_states,
decoder_attentions=outputs.decoder_attentions,
cross_attentions=outputs.cross_attentions,
encoder_last_hidden_state=outputs.encoder_last_hidden_state,
encoder_hidden_states=outputs.encoder_hidden_states,
encoder_attentions=outputs.encoder_attentions,
)
# Copied from transformers.models.bart.modeling_bart.BartDecoderWrapper with Bart->Mvp
class MvpDecoderWrapper(MvpPreTrainedModel):
"""
This wrapper class is a helper class to correctly load pretrained checkpoints when the causal language model is
used in combination with the [`EncoderDecoderModel`] framework.
"""
def __init__(self, config):
super().__init__(config)
self.decoder = MvpDecoder(config)
def forward(self, *args, **kwargs):
return self.decoder(*args, **kwargs)
class MvpForCausalLM(MvpPreTrainedModel):
_tied_weights_keys = ["lm_head.weight"]
def __init__(self, config):
config = copy.deepcopy(config)
config.is_decoder = True
config.is_encoder_decoder = False
super().__init__(config)
self.model = MvpDecoderWrapper(config)
self.lm_head = nn.Linear(config.hidden_size, config.vocab_size, bias=False)
# Initialize weights and apply final processing
self.post_init()
def get_input_embeddings(self):
return self.model.decoder.embed_tokens
def set_input_embeddings(self, value):
self.model.decoder.embed_tokens = value
def get_output_embeddings(self):
return self.lm_head
def set_output_embeddings(self, new_embeddings):
self.lm_head = new_embeddings
def set_decoder(self, decoder):
self.model.decoder = decoder
def get_decoder(self):
return self.model.decoder
def set_lightweight_tuning(self):
self.model.set_lightweight_tuning()
self.lm_head.requires_grad_(False)
@replace_return_docstrings(output_type=CausalLMOutputWithCrossAttentions, config_class=_CONFIG_FOR_DOC)
def forward(
self,
input_ids: torch.LongTensor = None,
attention_mask: Optional[torch.Tensor] = None,
encoder_hidden_states: Optional[torch.FloatTensor] = None,
encoder_attention_mask: Optional[torch.FloatTensor] = None,
head_mask: Optional[torch.Tensor] = None,
cross_attn_head_mask: Optional[torch.Tensor] = None,
past_key_values: Optional[List[torch.FloatTensor]] = None,
inputs_embeds: Optional[torch.FloatTensor] = None,
labels: Optional[torch.LongTensor] = None,
use_cache: Optional[bool] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[Tuple, CausalLMOutputWithCrossAttentions]:
r"""
Args:
input_ids (`torch.LongTensor` of shape `(batch_size, sequence_length)`):
Indices of input sequence tokens in the vocabulary. Padding will be ignored by default should you
provide it.
Indices can be obtained using [`AutoTokenizer`]. See [`PreTrainedTokenizer.encode`] and
[`PreTrainedTokenizer.__call__`] for details.
[What are input IDs?](../glossary#input-ids)
attention_mask (`torch.Tensor` of shape `(batch_size, sequence_length)`, *optional*):
Mask to avoid performing attention on padding token indices. Mask values selected in `[0, 1]`:
- 1 for tokens that are **not masked**,
- 0 for tokens that are **masked**.
[What are attention masks?](../glossary#attention-mask)
encoder_hidden_states (`torch.FloatTensor` of shape `(batch_size, sequence_length, hidden_size)`, *optional*):
Sequence of hidden-states at the output of the last layer of the encoder. Used in the cross-attention
if the model is configured as a decoder.
encoder_attention_mask (`torch.FloatTensor` of shape `(batch_size, sequence_length)`, *optional*):
Mask to avoid performing attention on the padding token indices of the encoder input. This mask is used
in the cross-attention if the model is configured as a decoder. Mask values selected in `[0, 1]`:
head_mask (`torch.Tensor` of shape `(decoder_layers, decoder_attention_heads)`, *optional*):
Mask to nullify selected heads of the attention modules. Mask values selected in `[0, 1]`:
- 1 indicates the head is **not masked**,
- 0 indicates the head is **masked**.
cross_attn_head_mask (`torch.Tensor` of shape `(decoder_layers, decoder_attention_heads)`, *optional*):
Mask to nullify selected heads of the cross-attention modules. Mask values selected in `[0, 1]`:
- 1 indicates the head is **not masked**,
- 0 indicates the head is **masked**.
past_key_values (`tuple(tuple(torch.FloatTensor))`, *optional*, returned when `use_cache=True` is passed or when `config.use_cache=True`):
Tuple of `tuple(torch.FloatTensor)` of length `config.n_layers`, with each tuple having 2 tensors of
shape `(batch_size, num_heads, sequence_length, embed_size_per_head)`) and 2 additional tensors of
shape `(batch_size, num_heads, encoder_sequence_length, embed_size_per_head)`. The two additional
tensors are only required when the model is used as a decoder in a Sequence to Sequence model.
Contains pre-computed hidden-states (key and values in the self-attention blocks and in the
cross-attention blocks) that can be used (see `past_key_values` input) to speed up sequential decoding.
If `past_key_values` are used, the user can optionally input only the last `decoder_input_ids` (those
that don't have their past key value states given to this model) of shape `(batch_size, 1)` instead of
all `decoder_input_ids` of shape `(batch_size, sequence_length)`.
labels (`torch.LongTensor` of shape `(batch_size, sequence_length)`, *optional*):
Labels for computing the masked language modeling loss. Indices should either be in `[0, ...,
config.vocab_size]` or -100 (see `input_ids` docstring). Tokens with indices set to `-100` are ignored
(masked), the loss is only computed for the tokens with labels in `[0, ..., config.vocab_size]`.
use_cache (`bool`, *optional*):
If set to `True`, `past_key_values` key value states are returned and can be used to speed up decoding
(see `past_key_values`).
- 1 for tokens that are **not masked**,
- 0 for tokens that are **masked**.
output_attentions (`bool`, *optional*):
Whether or not to return the attentions tensors of all attention layers. See `attentions` under
returned tensors for more detail.
output_hidden_states (`bool`, *optional*):
Whether or not to return the hidden states of all layers. See `hidden_states` under returned tensors
for more detail.
return_dict (`bool`, *optional*):
Whether or not to return a [`~utils.ModelOutput`] instead of a plain tuple.
Returns:
Example:
```python
>>> from transformers import AutoTokenizer, MvpForCausalLM
>>> tokenizer = AutoTokenizer.from_pretrained("RUCAIBox/mvp")
>>> model = MvpForCausalLM.from_pretrained("RUCAIBox/mvp", add_cross_attention=False)
>>> inputs = tokenizer("Hello, my dog is cute", return_tensors="pt")
>>> outputs = model(**inputs)
>>> logits = outputs.logits
>>> list(logits.shape)
[1, 8, 50267]
```"""
output_attentions = output_attentions if output_attentions is not None else self.config.output_attentions
output_hidden_states = (
output_hidden_states if output_hidden_states is not None else self.config.output_hidden_states
)
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
# decoder outputs consists of (dec_features, layer_state, dec_hidden, dec_attn)
outputs = self.model.decoder(
input_ids=input_ids,
attention_mask=attention_mask,
encoder_hidden_states=encoder_hidden_states,
encoder_attention_mask=encoder_attention_mask,
head_mask=head_mask,
cross_attn_head_mask=cross_attn_head_mask,
past_key_values=past_key_values,
inputs_embeds=inputs_embeds,
use_cache=use_cache,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
logits = self.lm_head(outputs[0])
loss = None
if labels is not None:
loss_fct = CrossEntropyLoss()
loss = loss_fct(logits.view(-1, self.config.vocab_size), labels.view(-1))
if not return_dict:
output = (logits,) + outputs[1:]
return (loss,) + output if loss is not None else output
return CausalLMOutputWithCrossAttentions(
loss=loss,
logits=logits,
past_key_values=outputs.past_key_values,
hidden_states=outputs.hidden_states,
attentions=outputs.attentions,
cross_attentions=outputs.cross_attentions,
)
def prepare_inputs_for_generation(
self, input_ids, past_key_values=None, attention_mask=None, use_cache=None, **kwargs
):
# if model is used as a decoder in encoder-decoder model, the decoder attention mask is created on the fly
if attention_mask is None:
attention_mask = input_ids.new_ones(input_ids.shape)
if past_key_values:
input_ids = input_ids[:, -1:]
# first step, decoder_cached_states are empty
return {
"input_ids": input_ids, # encoder_outputs is defined. input_ids not needed
"attention_mask": attention_mask,
"past_key_values": past_key_values,
"use_cache": use_cache,
}
@staticmethod
def _reorder_cache(past_key_values, beam_idx):
reordered_past = ()
for layer_past in past_key_values:
reordered_past += (tuple(past_state.index_select(0, beam_idx) for past_state in layer_past),)
return reordered_past
| 95,123 | 44.931434 | 150 | py |
transformers | transformers-main/src/transformers/models/mvp/__init__.py | # Copyright 2022 The HuggingFace Team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
from typing import TYPE_CHECKING
from ...utils import OptionalDependencyNotAvailable, _LazyModule, is_tokenizers_available, is_torch_available
_import_structure = {
"configuration_mvp": ["MVP_PRETRAINED_CONFIG_ARCHIVE_MAP", "MvpConfig", "MvpOnnxConfig"],
"tokenization_mvp": ["MvpTokenizer"],
}
try:
if not is_tokenizers_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
_import_structure["tokenization_mvp_fast"] = ["MvpTokenizerFast"]
try:
if not is_torch_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
_import_structure["modeling_mvp"] = [
"MVP_PRETRAINED_MODEL_ARCHIVE_LIST",
"MvpForCausalLM",
"MvpForConditionalGeneration",
"MvpForQuestionAnswering",
"MvpForSequenceClassification",
"MvpModel",
"MvpPreTrainedModel",
]
if TYPE_CHECKING:
from .configuration_mvp import MVP_PRETRAINED_CONFIG_ARCHIVE_MAP, MvpConfig, MvpOnnxConfig
from .tokenization_mvp import MvpTokenizer
try:
if not is_tokenizers_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
from .tokenization_mvp_fast import MvpTokenizerFast
try:
if not is_torch_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
from .modeling_mvp import (
MVP_PRETRAINED_MODEL_ARCHIVE_LIST,
MvpForCausalLM,
MvpForConditionalGeneration,
MvpForQuestionAnswering,
MvpForSequenceClassification,
MvpModel,
MvpPreTrainedModel,
)
else:
import sys
sys.modules[__name__] = _LazyModule(__name__, globals()["__file__"], _import_structure, module_spec=__spec__)
| 2,536 | 30.7125 | 113 | py |
transformers | transformers-main/src/transformers/models/sam/image_processing_sam.py | # coding=utf-8
# Copyright 2023 The HuggingFace Inc. team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
"""Image processor class for SAM."""
import math
from copy import deepcopy
from itertools import product
from typing import Any, Dict, List, Optional, Tuple, Union
import numpy as np
from ...image_processing_utils import BaseImageProcessor, BatchFeature, get_size_dict
from ...image_transforms import convert_to_rgb, normalize, pad, rescale, resize, to_channel_dimension_format
from ...image_utils import (
IMAGENET_DEFAULT_MEAN,
IMAGENET_DEFAULT_STD,
ChannelDimension,
ImageInput,
PILImageResampling,
get_image_size,
infer_channel_dimension_format,
make_list_of_images,
to_numpy_array,
valid_images,
)
from ...utils import (
TensorType,
is_tf_available,
is_torch_available,
is_torchvision_available,
logging,
requires_backends,
)
if is_torch_available():
import torch
import torch.nn.functional as F
if is_torchvision_available():
from torchvision.ops.boxes import batched_nms
if is_tf_available():
import tensorflow as tf
from tensorflow.experimental import numpy as tnp
from ...tf_utils import flatten, shape_list
logger = logging.get_logger(__name__)
class SamImageProcessor(BaseImageProcessor):
r"""
Constructs a SAM image processor.
Args:
do_resize (`bool`, *optional*, defaults to `True`):
Whether to resize the image's (height, width) dimensions to the specified `size`. Can be overridden by the
`do_resize` parameter in the `preprocess` method.
size (`dict`, *optional*, defaults to `{"longest_edge": 1024}`):
Size of the output image after resizing. Resizes the longest edge of the image to match
`size["longest_edge"]` while maintaining the aspect ratio. Can be overridden by the `size` parameter in the
`preprocess` method.
resample (`PILImageResampling`, *optional*, defaults to `PILImageResampling.BICUBIC`):
Resampling filter to use if resizing the image. Can be overridden by the `resample` parameter in the
`preprocess` method.
do_rescale (`bool`, *optional*, defaults to `True`):
Wwhether to rescale the image by the specified scale `rescale_factor`. Can be overridden by the
`do_rescale` parameter in the `preprocess` method.
rescale_factor (`int` or `float`, *optional*, defaults to `1/255`):
Scale factor to use if rescaling the image. Only has an effect if `do_rescale` is set to `True`. Can be
overridden by the `rescale_factor` parameter in the `preprocess` method.
do_normalize (`bool`, *optional*, defaults to `True`):
Whether to normalize the image. Can be overridden by the `do_normalize` parameter in the `preprocess`
method. Can be overridden by the `do_normalize` parameter in the `preprocess` method.
image_mean (`float` or `List[float]`, *optional*, defaults to `IMAGENET_DEFAULT_MEAN`):
Mean to use if normalizing the image. This is a float or list of floats the length of the number of
channels in the image. Can be overridden by the `image_mean` parameter in the `preprocess` method. Can be
overridden by the `image_mean` parameter in the `preprocess` method.
image_std (`float` or `List[float]`, *optional*, defaults to `IMAGENET_DEFAULT_STD`):
Standard deviation to use if normalizing the image. This is a float or list of floats the length of the
number of channels in the image. Can be overridden by the `image_std` parameter in the `preprocess` method.
Can be overridden by the `image_std` parameter in the `preprocess` method.
do_pad (`bool`, *optional*, defaults to `True`):
Whether to pad the image to the specified `pad_size`. Can be overridden by the `do_pad` parameter in the
`preprocess` method.
pad_size (`dict`, *optional*, defaults to `{"height": 1024, "width": 1024}`):
Size of the output image after padding. Can be overridden by the `pad_size` parameter in the `preprocess`
method.
do_convert_rgb (`bool`, *optional*, defaults to `True`):
Whether to convert the image to RGB.
"""
model_input_names = ["pixel_values"]
def __init__(
self,
do_resize: bool = True,
size: Dict[str, int] = None,
resample: PILImageResampling = PILImageResampling.BILINEAR,
do_rescale: bool = True,
rescale_factor: Union[int, float] = 1 / 255,
do_normalize: bool = True,
image_mean: Optional[Union[float, List[float]]] = None,
image_std: Optional[Union[float, List[float]]] = None,
do_pad: bool = True,
pad_size: int = None,
do_convert_rgb: bool = True,
**kwargs,
) -> None:
super().__init__(**kwargs)
size = size if size is not None else {"longest_edge": 1024}
size = get_size_dict(max_size=size, default_to_square=False) if not isinstance(size, dict) else size
pad_size = pad_size if pad_size is not None else {"height": 1024, "width": 1024}
pad_size = get_size_dict(pad_size, default_to_square=True)
self.do_resize = do_resize
self.size = size
self.resample = resample
self.do_rescale = do_rescale
self.rescale_factor = rescale_factor
self.do_normalize = do_normalize
self.image_mean = image_mean if image_mean is not None else IMAGENET_DEFAULT_MEAN
self.image_std = image_std if image_std is not None else IMAGENET_DEFAULT_STD
self.do_pad = do_pad
self.pad_size = pad_size
self.do_convert_rgb = do_convert_rgb
def pad_image(
self,
image: np.ndarray,
pad_size: Dict[str, int],
data_format: Optional[Union[str, ChannelDimension]] = None,
**kwargs,
) -> np.ndarray:
"""
Pad an image to `(pad_size["height"], pad_size["width"])` with zeros to the right and bottom.
Args:
image (`np.ndarray`):
Image to pad.
pad_size (`Dict[str, int]`):
Size of the output image after padding.
data_format (`str` or `ChannelDimension`, *optional*):
The data format of the image. Can be either "channels_first" or "channels_last". If `None`, the
`data_format` of the `image` will be used.
"""
output_height, output_width = pad_size["height"], pad_size["width"]
input_height, input_width = get_image_size(image)
pad_width = output_width - input_width
pad_height = output_height - input_height
padded_image = pad(image, ((0, pad_height), (0, pad_width)), data_format=data_format, **kwargs)
return padded_image
def _get_preprocess_shape(self, old_shape: Tuple[int, int], longest_edge: int):
"""
Compute the output size given input size and target long side length.
"""
oldh, oldw = old_shape
scale = longest_edge * 1.0 / max(oldh, oldw)
newh, neww = oldh * scale, oldw * scale
newh = int(newh + 0.5)
neww = int(neww + 0.5)
return (newh, neww)
def resize(
self,
image: np.ndarray,
size: Dict[str, int],
resample: PILImageResampling = PILImageResampling.BICUBIC,
data_format: Optional[Union[str, ChannelDimension]] = None,
**kwargs,
) -> np.ndarray:
"""
Resize an image to `(size["height"], size["width"])`.
Args:
image (`np.ndarray`):
Image to resize.
size (`Dict[str, int]`):
Dictionary in the format `{"longest_edge": int}` specifying the size of the output image. The longest
edge of the image will be resized to the specified size, while the other edge will be resized to
maintain the aspect ratio.
resample:
`PILImageResampling` filter to use when resizing the image e.g. `PILImageResampling.BILINEAR`.
data_format (`ChannelDimension` or `str`, *optional*):
The channel dimension format for the output image. If unset, the channel dimension format of the input
image is used. Can be one of:
- `"channels_first"` or `ChannelDimension.FIRST`: image in (num_channels, height, width) format.
- `"channels_last"` or `ChannelDimension.LAST`: image in (height, width, num_channels) format.
Returns:
`np.ndarray`: The resized image.
"""
size = get_size_dict(size)
if "longest_edge" not in size:
raise ValueError(f"The `size` dictionary must contain the key `longest_edge`. Got {size.keys()}")
input_size = get_image_size(image)
output_height, output_width = self._get_preprocess_shape(input_size, size["longest_edge"])
return resize(image, size=(output_height, output_width), resample=resample, data_format=data_format, **kwargs)
def rescale(
self,
image: np.ndarray,
scale: Union[int, float],
data_format: Optional[Union[str, ChannelDimension]] = None,
**kwargs,
):
"""
Rescale an image by a scale factor. image = image * scale.
Args:
image (`np.ndarray`):
Image to rescale.
scale (`int` or `float`):
Scale to apply to the image.
data_format (`str` or `ChannelDimension`, *optional*):
The channel dimension format of the image. If not provided, it will be the same as the input image.
"""
return rescale(image, scale=scale, data_format=data_format, **kwargs)
def normalize(
self,
image: np.ndarray,
mean: Union[float, List[float]],
std: Union[float, List[float]],
data_format: Optional[Union[str, ChannelDimension]] = None,
**kwargs,
) -> np.ndarray:
"""
Normalize an image. image = (image - image_mean) / image_std.
Args:
image (`np.ndarray`):
Image to normalize.
mean (`float` or `List[float]`):
Image mean.
std (`float` or `List[float]`):
Image standard deviation.
data_format (`str` or `ChannelDimension`, *optional*):
The channel dimension format of the image. If not provided, it will be the same as the input image.
"""
return normalize(image, mean=mean, std=std, data_format=data_format, **kwargs)
def preprocess(
self,
images: ImageInput,
do_resize: Optional[bool] = None,
size: Optional[Dict[str, int]] = None,
resample: Optional["PILImageResampling"] = None,
do_rescale: Optional[bool] = None,
rescale_factor: Optional[Union[int, float]] = None,
do_normalize: Optional[bool] = None,
image_mean: Optional[Union[float, List[float]]] = None,
image_std: Optional[Union[float, List[float]]] = None,
do_pad: Optional[bool] = None,
pad_size: Optional[Dict[str, int]] = None,
do_convert_rgb: bool = None,
return_tensors: Optional[Union[str, TensorType]] = None,
data_format: ChannelDimension = ChannelDimension.FIRST,
**kwargs,
):
"""
Preprocess an image or batch of images.
Args:
images (`ImageInput`):
Image to preprocess.
do_resize (`bool`, *optional*, defaults to `self.do_resize`):
Whether to resize the image.
size (`Dict[str, int]`, *optional*, defaults to `self.size`):
Controls the size of the image after `resize`. The longest edge of the image is resized to
`size["longest_edge"]` whilst preserving the aspect ratio.
resample (`PILImageResampling`, *optional*, defaults to `self.resample`):
`PILImageResampling` filter to use when resizing the image e.g. `PILImageResampling.BILINEAR`.
do_rescale (`bool`, *optional*, defaults to `self.do_rescale`):
Whether to rescale the image pixel values by rescaling factor.
rescale_factor (`int` or `float`, *optional*, defaults to `self.rescale_factor`):
Rescale factor to apply to the image pixel values.
do_normalize (`bool`, *optional*, defaults to `self.do_normalize`):
Whether to normalize the image.
image_mean (`float` or `List[float]`, *optional*, defaults to `self.image_mean`):
Image mean to normalize the image by if `do_normalize` is set to `True`.
image_std (`float` or `List[float]`, *optional*, defaults to `self.image_std`):
Image standard deviation to normalize the image by if `do_normalize` is set to `True`.
do_pad (`bool`, *optional*, defaults to `self.do_pad`):
Whether to pad the image.
pad_size (`Dict[str, int]`, *optional*, defaults to `self.pad_size`):
Controls the size of the padding applied to the image. The image is padded to `pad_size["height"]` and
`pad_size["width"]` if `do_pad` is set to `True`.
do_convert_rgb (`bool`, *optional*, defaults to `self.do_convert_rgb`):
Whether to convert the image to RGB.
return_tensors (`str` or `TensorType`, *optional*):
The type of tensors to return. Can be one of:
- Unset: Return a list of `np.ndarray`.
- `TensorType.TENSORFLOW` or `'tf'`: Return a batch of type `tf.Tensor`.
- `TensorType.PYTORCH` or `'pt'`: Return a batch of type `torch.Tensor`.
- `TensorType.NUMPY` or `'np'`: Return a batch of type `np.ndarray`.
- `TensorType.JAX` or `'jax'`: Return a batch of type `jax.numpy.ndarray`.
data_format (`ChannelDimension` or `str`, *optional*, defaults to `ChannelDimension.FIRST`):
The channel dimension format for the output image. Can be one of:
- `"channels_first"` or `ChannelDimension.FIRST`: image in (num_channels, height, width) format.
- `"channels_last"` or `ChannelDimension.LAST`: image in (height, width, num_channels) format.
- Unset: Use the channel dimension format of the input image.
"""
do_resize = do_resize if do_resize is not None else self.do_resize
size = size if size is not None else self.size
size = get_size_dict(max_size=size, default_to_square=False) if not isinstance(size, dict) else size
resample = resample if resample is not None else self.resample
do_rescale = do_rescale if do_rescale is not None else self.do_rescale
rescale_factor = rescale_factor if rescale_factor is not None else self.rescale_factor
do_normalize = do_normalize if do_normalize is not None else self.do_normalize
image_mean = image_mean if image_mean is not None else self.image_mean
image_std = image_std if image_std is not None else self.image_std
do_pad = do_pad if do_pad is not None else self.do_pad
pad_size = pad_size if pad_size is not None else self.pad_size
pad_size = get_size_dict(pad_size, default_to_square=True)
do_convert_rgb = do_convert_rgb if do_convert_rgb is not None else self.do_convert_rgb
images = make_list_of_images(images)
if not valid_images(images):
raise ValueError(
"Invalid image type. Must be of type PIL.Image.Image, numpy.ndarray, "
"torch.Tensor, tf.Tensor or jax.ndarray."
)
if do_resize and (size is None or resample is None):
raise ValueError("Size and resample must be specified if do_resize is True.")
if do_rescale and rescale_factor is None:
raise ValueError("Rescale factor must be specified if do_rescale is True.")
if do_normalize and (image_mean is None or image_std is None):
raise ValueError("Image mean and std must be specified if do_normalize is True.")
if do_pad and pad_size is None:
raise ValueError("Pad size must be specified if do_pad is True.")
# PIL RGBA images are converted to RGB
if do_convert_rgb:
images = [convert_to_rgb(image) for image in images]
# All transformations expect numpy arrays.
images = [to_numpy_array(image) for image in images]
original_sizes = [get_image_size(image) for image in images]
if do_resize:
images = [self.resize(image=image, size=size, resample=resample) for image in images]
reshaped_input_sizes = [get_image_size(image) for image in images]
if do_rescale:
images = [self.rescale(image=image, scale=rescale_factor) for image in images]
if do_normalize:
images = [self.normalize(image=image, mean=image_mean, std=image_std) for image in images]
if do_pad:
images = [self.pad_image(image=image, pad_size=pad_size) for image in images]
images = [to_channel_dimension_format(image, data_format) for image in images]
encoded_outputs = BatchFeature(
data={
"pixel_values": images,
"original_sizes": original_sizes,
"reshaped_input_sizes": reshaped_input_sizes,
},
tensor_type=return_tensors,
)
return encoded_outputs
def post_process_masks(
self,
masks,
original_sizes,
reshaped_input_sizes,
mask_threshold=0.0,
binarize=True,
pad_size=None,
return_tensors="pt",
):
"""
Remove padding and upscale masks to the original image size.
Args:
masks (`Union[List[torch.Tensor], List[np.ndarray], List[tf.Tensor]]`):
Batched masks from the mask_decoder in (batch_size, num_channels, height, width) format.
original_sizes (`Union[torch.Tensor, tf.Tensor, List[Tuple[int,int]]]`):
The original sizes of each image before it was resized to the model's expected input shape, in (height,
width) format.
reshaped_input_sizes (`Union[torch.Tensor, tf.Tensor, List[Tuple[int,int]]]`):
The size of each image as it is fed to the model, in (height, width) format. Used to remove padding.
mask_threshold (`float`, *optional*, defaults to 0.0):
The threshold to use for binarizing the masks.
binarize (`bool`, *optional*, defaults to `True`):
Whether to binarize the masks.
pad_size (`int`, *optional*, defaults to `self.pad_size`):
The target size the images were padded to before being passed to the model. If None, the target size is
assumed to be the processor's `pad_size`.
return_tensors (`str`, *optional*, defaults to `"pt"`):
If `"pt"`, return PyTorch tensors. If `"tf"`, return TensorFlow tensors.
Returns:
(`Union[torch.Tensor, tf.Tensor]`): Batched masks in batch_size, num_channels, height, width) format, where
(height, width) is given by original_size.
"""
if return_tensors == "pt":
return self._post_process_masks_pt(
masks=masks,
original_sizes=original_sizes,
reshaped_input_sizes=reshaped_input_sizes,
mask_threshold=mask_threshold,
binarize=binarize,
pad_size=pad_size,
)
elif return_tensors == "tf":
return self._post_process_masks_tf(
masks=masks,
original_sizes=original_sizes,
reshaped_input_sizes=reshaped_input_sizes,
mask_threshold=mask_threshold,
binarize=binarize,
pad_size=pad_size,
)
else:
raise ValueError("return_tensors must be either 'pt' or 'tf'")
def _post_process_masks_pt(
self, masks, original_sizes, reshaped_input_sizes, mask_threshold=0.0, binarize=True, pad_size=None
):
"""
Remove padding and upscale masks to the original image size.
Args:
masks (`Union[List[torch.Tensor], List[np.ndarray]]`):
Batched masks from the mask_decoder in (batch_size, num_channels, height, width) format.
original_sizes (`Union[torch.Tensor, List[Tuple[int,int]]]`):
The original sizes of each image before it was resized to the model's expected input shape, in (height,
width) format.
reshaped_input_sizes (`Union[torch.Tensor, List[Tuple[int,int]]]`):
The size of each image as it is fed to the model, in (height, width) format. Used to remove padding.
mask_threshold (`float`, *optional*, defaults to 0.0):
The threshold to use for binarizing the masks.
binarize (`bool`, *optional*, defaults to `True`):
Whether to binarize the masks.
pad_size (`int`, *optional*, defaults to `self.pad_size`):
The target size the images were padded to before being passed to the model. If None, the target size is
assumed to be the processor's `pad_size`.
Returns:
(`torch.Tensor`): Batched masks in batch_size, num_channels, height, width) format, where (height, width)
is given by original_size.
"""
requires_backends(self, ["torch"])
pad_size = self.pad_size if pad_size is None else pad_size
target_image_size = (pad_size["height"], pad_size["width"])
if isinstance(original_sizes, (torch.Tensor, np.ndarray)):
original_sizes = original_sizes.tolist()
if isinstance(reshaped_input_sizes, (torch.Tensor, np.ndarray)):
reshaped_input_sizes = reshaped_input_sizes.tolist()
output_masks = []
for i, original_size in enumerate(original_sizes):
if isinstance(masks[i], np.ndarray):
masks[i] = torch.from_numpy(masks[i])
elif not isinstance(masks[i], torch.Tensor):
raise ValueError("Input masks should be a list of `torch.tensors` or a list of `np.ndarray`")
interpolated_mask = F.interpolate(masks[i], target_image_size, mode="bilinear", align_corners=False)
interpolated_mask = interpolated_mask[..., : reshaped_input_sizes[i][0], : reshaped_input_sizes[i][1]]
interpolated_mask = F.interpolate(interpolated_mask, original_size, mode="bilinear", align_corners=False)
if binarize:
interpolated_mask = interpolated_mask > mask_threshold
output_masks.append(interpolated_mask)
return output_masks
def _post_process_masks_tf(
self, masks, original_sizes, reshaped_input_sizes, mask_threshold=0.0, binarize=True, pad_size=None
):
"""
Remove padding and upscale masks to the original image size.
Args:
masks (`tf.Tensor`):
Batched masks from the mask_decoder in (batch_size, num_channels, height, width) format.
original_sizes (`tf.Tensor`):
The original size of the images before resizing for input to the model, in (height, width) format.
reshaped_input_sizes (`tf.Tensor`):
The size of the image input to the model, in (height, width) format. Used to remove padding.
mask_threshold (`float`, *optional*, defaults to 0.0):
The threshold to use for binarizing the masks.
binarize (`bool`, *optional*, defaults to `True`):
Whether to binarize the masks.
pad_size (`int`, *optional*, defaults to `self.pad_size`):
The target size the images were padded to before being passed to the model. If None, the target size is
assumed to be the processor's `pad_size`.
Returns:
(`tf.Tensor`): Batched masks in batch_size, num_channels, height, width) format, where (height, width) is
given by original_size.
"""
requires_backends(self, ["tf"])
pad_size = self.pad_size if pad_size is None else pad_size
target_image_size = (pad_size["height"], pad_size["width"])
output_masks = []
for i, original_size in enumerate(original_sizes):
# tf.image expects NHWC, we transpose the NCHW inputs for it
mask = tf.transpose(masks[i], perm=[0, 2, 3, 1])
interpolated_mask = tf.image.resize(mask, target_image_size, method="bilinear")
interpolated_mask = interpolated_mask[:, : reshaped_input_sizes[i][0], : reshaped_input_sizes[i][1], :]
interpolated_mask = tf.image.resize(interpolated_mask, original_size, method="bilinear")
if binarize:
interpolated_mask = interpolated_mask > mask_threshold
# And then we transpose them back at the end
output_masks.append(tf.transpose(interpolated_mask, perm=[0, 3, 1, 2]))
return output_masks
def post_process_for_mask_generation(
self, all_masks, all_scores, all_boxes, crops_nms_thresh, return_tensors="pt"
):
"""
Post processes mask that are generated by calling the Non Maximum Suppression algorithm on the predicted masks.
Args:
all_masks (`Union[List[torch.Tensor], List[tf.Tensor]]`):
List of all predicted segmentation masks
all_scores (`Union[List[torch.Tensor], List[tf.Tensor]]`):
List of all predicted iou scores
all_boxes (`Union[List[torch.Tensor], List[tf.Tensor]]`):
List of all bounding boxes of the predicted masks
crops_nms_thresh (`float`):
Threshold for NMS (Non Maximum Suppression) algorithm.
return_tensors (`str`, *optional*, defaults to `pt`):
If `pt`, returns `torch.Tensor`. If `tf`, returns `tf.Tensor`.
"""
if return_tensors == "pt":
return _postprocess_for_mg(all_masks, all_scores, all_boxes, crops_nms_thresh)
elif return_tensors == "tf":
return _postprocess_for_mg_tf(all_masks, all_scores, all_boxes, crops_nms_thresh)
def generate_crop_boxes(
self,
image,
target_size,
crop_n_layers: int = 0,
overlap_ratio: float = 512 / 1500,
points_per_crop: Optional[int] = 32,
crop_n_points_downscale_factor: Optional[List[int]] = 1,
device: Optional["torch.device"] = None,
return_tensors: str = "pt",
):
"""
Generates a list of crop boxes of different sizes. Each layer has (2**i)**2 boxes for the ith layer.
Args:
image (`np.array`):
Input original image
target_size (`int`):
Target size of the resized image
crop_n_layers (`int`, *optional*, defaults to 0):
If >0, mask prediction will be run again on crops of the image. Sets the number of layers to run, where
each layer has 2**i_layer number of image crops.
overlap_ratio (`float`, *optional*, defaults to 512/1500):
Sets the degree to which crops overlap. In the first crop layer, crops will overlap by this fraction of
the image length. Later layers with more crops scale down this overlap.
points_per_crop (`int`, *optional*, defaults to 32):
Number of points to sample from each crop.
crop_n_points_downscale_factor (`List[int]`, *optional*, defaults to 1):
The number of points-per-side sampled in layer n is scaled down by crop_n_points_downscale_factor**n.
device (`torch.device`, *optional*, defaults to None):
Device to use for the computation. If None, cpu will be used.
return_tensors (`str`, *optional*, defaults to `pt`):
If `pt`, returns `torch.Tensor`. If `tf`, returns `tf.Tensor`.
"""
crop_boxes, points_per_crop, cropped_images, input_labels = _generate_crop_boxes(
image,
target_size,
crop_n_layers,
overlap_ratio,
points_per_crop,
crop_n_points_downscale_factor,
)
if return_tensors == "pt":
if device is None:
device = torch.device("cpu")
crop_boxes = torch.tensor(crop_boxes, device=device)
points_per_crop = torch.tensor(points_per_crop, device=device)
# cropped_images stays as np
input_labels = torch.tensor(input_labels, device=device)
elif return_tensors == "tf":
if device is not None:
raise ValueError("device is not a supported argument when return_tensors is tf!")
crop_boxes = tf.convert_to_tensor(crop_boxes)
points_per_crop = tf.convert_to_tensor(points_per_crop)
# cropped_images stays as np
input_labels = tf.convert_to_tensor(input_labels)
else:
raise ValueError("return_tensors must be either 'pt' or 'tf'.")
return crop_boxes, points_per_crop, cropped_images, input_labels
def filter_masks(
self,
masks,
iou_scores,
original_size,
cropped_box_image,
pred_iou_thresh=0.88,
stability_score_thresh=0.95,
mask_threshold=0,
stability_score_offset=1,
return_tensors="pt",
):
"""
Filters the predicted masks by selecting only the ones that meets several criteria. The first criterion being
that the iou scores needs to be greater than `pred_iou_thresh`. The second criterion is that the stability
score needs to be greater than `stability_score_thresh`. The method also converts the predicted masks to
bounding boxes and pad the predicted masks if necessary.
Args:
masks (`Union[torch.Tensor, tf.Tensor]`):
Input masks.
iou_scores (`Union[torch.Tensor, tf.Tensor]`):
List of IoU scores.
original_size (`Tuple[int,int]`):
Size of the orginal image.
cropped_box_image (`np.array`):
The cropped image.
pred_iou_thresh (`float`, *optional*, defaults to 0.88):
The threshold for the iou scores.
stability_score_thresh (`float`, *optional*, defaults to 0.95):
The threshold for the stability score.
mask_threshold (`float`, *optional*, defaults to 0):
The threshold for the predicted masks.
stability_score_offset (`float`, *optional*, defaults to 1):
The offset for the stability score used in the `_compute_stability_score` method.
return_tensors (`str`, *optional*, defaults to `pt`):
If `pt`, returns `torch.Tensor`. If `tf`, returns `tf.Tensor`.
"""
if return_tensors == "pt":
return self._filter_masks_pt(
masks=masks,
iou_scores=iou_scores,
original_size=original_size,
cropped_box_image=cropped_box_image,
pred_iou_thresh=pred_iou_thresh,
stability_score_thresh=stability_score_thresh,
mask_threshold=mask_threshold,
stability_score_offset=stability_score_offset,
)
elif return_tensors == "tf":
return self._filter_masks_tf(
masks=masks,
iou_scores=iou_scores,
original_size=original_size,
cropped_box_image=cropped_box_image,
pred_iou_thresh=pred_iou_thresh,
stability_score_thresh=stability_score_thresh,
mask_threshold=mask_threshold,
stability_score_offset=stability_score_offset,
)
def _filter_masks_pt(
self,
masks,
iou_scores,
original_size,
cropped_box_image,
pred_iou_thresh=0.88,
stability_score_thresh=0.95,
mask_threshold=0,
stability_score_offset=1,
):
"""
Filters the predicted masks by selecting only the ones that meets several criteria. The first criterion being
that the iou scores needs to be greater than `pred_iou_thresh`. The second criterion is that the stability
score needs to be greater than `stability_score_thresh`. The method also converts the predicted masks to
bounding boxes and pad the predicted masks if necessary.
Args:
masks (`torch.Tensor`):
Input masks.
iou_scores (`torch.Tensor`):
List of IoU scores.
original_size (`Tuple[int,int]`):
Size of the orginal image.
cropped_box_image (`np.array`):
The cropped image.
pred_iou_thresh (`float`, *optional*, defaults to 0.88):
The threshold for the iou scores.
stability_score_thresh (`float`, *optional*, defaults to 0.95):
The threshold for the stability score.
mask_threshold (`float`, *optional*, defaults to 0):
The threshold for the predicted masks.
stability_score_offset (`float`, *optional*, defaults to 1):
The offset for the stability score used in the `_compute_stability_score` method.
"""
requires_backends(self, ["torch"])
original_height, original_width = original_size
iou_scores = iou_scores.flatten(0, 1)
masks = masks.flatten(0, 1)
if masks.shape[0] != iou_scores.shape[0]:
raise ValueError("masks and iou_scores must have the same batch size.")
if masks.device != iou_scores.device:
iou_scores = iou_scores.to(masks.device)
batch_size = masks.shape[0]
keep_mask = torch.ones(batch_size, dtype=torch.bool, device=masks.device)
if pred_iou_thresh > 0.0:
keep_mask = keep_mask & (iou_scores > pred_iou_thresh)
# compute stability score
if stability_score_thresh > 0.0:
stability_scores = _compute_stability_score_pt(masks, mask_threshold, stability_score_offset)
keep_mask = keep_mask & (stability_scores > stability_score_thresh)
scores = iou_scores[keep_mask]
masks = masks[keep_mask]
# binarize masks
masks = masks > mask_threshold
converted_boxes = _batched_mask_to_box(masks)
keep_mask = ~_is_box_near_crop_edge(
converted_boxes, cropped_box_image, [0, 0, original_width, original_height]
)
scores = scores[keep_mask]
masks = masks[keep_mask]
converted_boxes = converted_boxes[keep_mask]
masks = _pad_masks(masks, cropped_box_image, original_height, original_width)
# conversion to rle is necessary to run non-maximum suppresion
masks = _mask_to_rle_pytorch(masks)
return masks, scores, converted_boxes
def _filter_masks_tf(
self,
masks,
iou_scores,
original_size,
cropped_box_image,
pred_iou_thresh=0.88,
stability_score_thresh=0.95,
mask_threshold=0,
stability_score_offset=1,
):
"""
Filters the predicted masks by selecting only the ones that meets several criteria. The first criterion being
that the iou scores needs to be greater than `pred_iou_thresh`. The second criterion is that the stability
score needs to be greater than `stability_score_thresh`. The method also converts the predicted masks to
bounding boxes and pad the predicted masks if necessary.
Args:
masks (`tf.Tensor`):
Input masks.
iou_scores (`tf.Tensor`):
List of IoU scores.
original_size (`Tuple[int,int]`):
Size of the orginal image.
cropped_box_image (`np.array`):
The cropped image.
pred_iou_thresh (`float`, *optional*, defaults to 0.88):
The threshold for the iou scores.
stability_score_thresh (`float`, *optional*, defaults to 0.95):
The threshold for the stability score.
mask_threshold (`float`, *optional*, defaults to 0):
The threshold for the predicted masks.
stability_score_offset (`float`, *optional*, defaults to 1):
The offset for the stability score used in the `_compute_stability_score` method.
"""
requires_backends(self, ["tf"])
original_height, original_width = original_size
iou_scores = tf.reshape(iou_scores, [iou_scores.shape[0] * iou_scores.shape[1], iou_scores.shape[2:]])
masks = tf.reshape(masks, [masks.shape[0] * masks.shape[1], masks.shape[2:]])
if masks.shape[0] != iou_scores.shape[0]:
raise ValueError("masks and iou_scores must have the same batch size.")
batch_size = masks.shape[0]
keep_mask = tf.ones(batch_size, dtype=tf.bool)
if pred_iou_thresh > 0.0:
keep_mask = keep_mask & (iou_scores > pred_iou_thresh)
# compute stability score
if stability_score_thresh > 0.0:
stability_scores = _compute_stability_score_tf(masks, mask_threshold, stability_score_offset)
keep_mask = keep_mask & (stability_scores > stability_score_thresh)
scores = iou_scores[keep_mask]
masks = masks[keep_mask]
# binarize masks
masks = masks > mask_threshold
converted_boxes = _batched_mask_to_box_tf(masks)
keep_mask = ~_is_box_near_crop_edge_tf(
converted_boxes, cropped_box_image, [0, 0, original_width, original_height]
)
scores = scores[keep_mask]
masks = masks[keep_mask]
converted_boxes = converted_boxes[keep_mask]
masks = _pad_masks_tf(masks, cropped_box_image, original_height, original_width)
# conversion to rle is necessary to run non-maximum suppresion
masks = _mask_to_rle_tf(masks)
return masks, scores, converted_boxes
def _compute_stability_score_pt(masks: "torch.Tensor", mask_threshold: float, stability_score_offset: int):
# One mask is always contained inside the other.
# Save memory by preventing unnecesary cast to torch.int64
intersections = (
(masks > (mask_threshold + stability_score_offset)).sum(-1, dtype=torch.int16).sum(-1, dtype=torch.int32)
)
unions = (masks > (mask_threshold - stability_score_offset)).sum(-1, dtype=torch.int16).sum(-1, dtype=torch.int32)
stability_scores = intersections / unions
return stability_scores
def _compute_stability_score_tf(masks: "tf.Tensor", mask_threshold: float, stability_score_offset: int):
# Torch does Py3-style division but TF does floor division with ints. We cast to float32 in TF to make sure
# we get the right division results.
intersections = tf.count_nonzero(
masks > (mask_threshold + stability_score_offset), axis=[-1, -2], dtype=tf.float32
)
unions = tf.count_nonzero(masks > (mask_threshold - stability_score_offset), axis=[-1, -2], dtype=tf.float32)
stability_scores = intersections / unions
return stability_scores
def _build_point_grid(n_per_side: int) -> np.ndarray:
"""Generates a 2D grid of points evenly spaced in [0,1]x[0,1]."""
offset = 1 / (2 * n_per_side)
points_one_side = np.linspace(offset, 1 - offset, n_per_side)
points_x = np.tile(points_one_side[None, :], (n_per_side, 1))
points_y = np.tile(points_one_side[:, None], (1, n_per_side))
points = np.stack([points_x, points_y], axis=-1).reshape(-1, 2)
return points
def _normalize_coordinates(
target_size: int, coords: np.ndarray, original_size: Tuple[int, int], is_bounding_box=False
) -> np.ndarray:
"""
Expects a numpy array of length 2 in the final dimension. Requires the original image size in (height, width)
format.
"""
old_height, old_width = original_size
scale = target_size * 1.0 / max(old_height, old_width)
new_height, new_width = old_height * scale, old_width * scale
new_width = int(new_width + 0.5)
new_height = int(new_height + 0.5)
coords = deepcopy(coords).astype(float)
if is_bounding_box:
coords = coords.reshape(-1, 2, 2)
coords[..., 0] = coords[..., 0] * (new_width / old_width)
coords[..., 1] = coords[..., 1] * (new_height / old_height)
if is_bounding_box:
coords = coords.reshape(-1, 4)
return coords
def _generate_crop_boxes(
image,
target_size: int, # Is it tuple here?
crop_n_layers: int = 0,
overlap_ratio: float = 512 / 1500,
points_per_crop: Optional[int] = 32,
crop_n_points_downscale_factor: Optional[List[int]] = 1,
) -> Tuple[List[List[int]], List[int]]:
"""
Generates a list of crop boxes of different sizes. Each layer has (2**i)**2 boxes for the ith layer.
Args:
image (Union[`numpy.ndarray`, `PIL.Image`, `torch.Tensor`]):
Image to generate crops for.
target_size (`int`):
Size of the smallest crop.
crop_n_layers (`int`, *optional*):
If `crops_n_layers>0`, mask prediction will be run again on crops of the image. Sets the number of layers
to run, where each layer has 2**i_layer number of image crops.
overlap_ratio (`int`, *optional*):
Sets the degree to which crops overlap. In the first crop layer, crops will overlap by this fraction of the
image length. Later layers with more crops scale down this overlap.
points_per_crop (`int`, *optional*):
Number of points to sample per crop.
crop_n_points_downscale_factor (`int`, *optional*):
The number of points-per-side sampled in layer n is scaled down by crop_n_points_downscale_factor**n.
"""
if isinstance(image, list):
raise ValueError("Only one image is allowed for crop generation.")
image = to_numpy_array(image)
original_size = get_image_size(image)
points_grid = []
for i in range(crop_n_layers + 1):
n_points = int(points_per_crop / (crop_n_points_downscale_factor**i))
points_grid.append(_build_point_grid(n_points))
crop_boxes, layer_idxs = _generate_per_layer_crops(crop_n_layers, overlap_ratio, original_size)
cropped_images, point_grid_per_crop = _generate_crop_images(
crop_boxes, image, points_grid, layer_idxs, target_size, original_size
)
crop_boxes = np.array(crop_boxes)
crop_boxes = crop_boxes.astype(np.float32)
points_per_crop = np.array([point_grid_per_crop])
points_per_crop = np.transpose(points_per_crop, axes=(0, 2, 1, 3))
input_labels = np.ones_like(points_per_crop[:, :, :, 0], dtype=np.int64)
return crop_boxes, points_per_crop, cropped_images, input_labels
def _generate_per_layer_crops(crop_n_layers, overlap_ratio, original_size):
"""
Generates 2 ** (layers idx + 1) crops for each crop_n_layers. Crops are in the XYWH format : The XYWH format
consists of the following required indices:
- X: X coordinate of the top left of the bounding box
- Y: Y coordinate of the top left of the bounding box
- W: width of the bounding box
- H: height of the bounding box
"""
crop_boxes, layer_idxs = [], []
im_height, im_width = original_size
short_side = min(im_height, im_width)
# Original image
crop_boxes.append([0, 0, im_width, im_height])
layer_idxs.append(0)
for i_layer in range(crop_n_layers):
n_crops_per_side = 2 ** (i_layer + 1)
overlap = int(overlap_ratio * short_side * (2 / n_crops_per_side))
crop_width = int(math.ceil((overlap * (n_crops_per_side - 1) + im_width) / n_crops_per_side))
crop_height = int(math.ceil((overlap * (n_crops_per_side - 1) + im_height) / n_crops_per_side))
crop_box_x0 = [int((crop_width - overlap) * i) for i in range(n_crops_per_side)]
crop_box_y0 = [int((crop_height - overlap) * i) for i in range(n_crops_per_side)]
for left, top in product(crop_box_x0, crop_box_y0):
box = [left, top, min(left + crop_width, im_width), min(top + crop_height, im_height)]
crop_boxes.append(box)
layer_idxs.append(i_layer + 1)
return crop_boxes, layer_idxs
def _generate_crop_images(crop_boxes, image, points_grid, layer_idxs, target_size, original_size):
"""
Takes as an input bounding boxes that are used to crop the image. Based in the crops, the corresponding points are
also passed.
"""
cropped_images = []
total_points_per_crop = []
for i, crop_box in enumerate(crop_boxes):
left, top, right, bottom = crop_box
channel_dim = infer_channel_dimension_format(image)
if channel_dim == ChannelDimension.LAST:
cropped_im = image[top:bottom, left:right, :]
else:
cropped_im = image[:, top:bottom, left:right]
cropped_images.append(cropped_im)
cropped_im_size = get_image_size(cropped_im)
points_scale = np.array(cropped_im_size)[None, ::-1]
points = points_grid[layer_idxs[i]] * points_scale
normalized_points = _normalize_coordinates(target_size, points, original_size)
total_points_per_crop.append(normalized_points)
return cropped_images, total_points_per_crop
def _pad_masks(masks, crop_box: List[int], orig_height: int, orig_width: int):
left, top, right, bottom = crop_box
if left == 0 and top == 0 and right == orig_width and bottom == orig_height:
return masks
# Coordinate transform masks
pad_x, pad_y = orig_width - (right - left), orig_height - (bottom - top)
pad = (left, pad_x - left, top, pad_y - top)
return torch.nn.functional.pad(masks, pad, value=0)
def _pad_masks_tf(masks, crop_box: List[int], orig_height: int, orig_width: int):
left, top, right, bottom = crop_box
if left == 0 and top == 0 and right == orig_width and bottom == orig_height:
return masks
# Coordinate transform masks
pad_x, pad_y = orig_width - (right - left), orig_height - (bottom - top)
pad = (left, pad_x - left, top, pad_y - top)
return tf.pad(masks, pad, constant_values=0)
def _is_box_near_crop_edge(boxes, crop_box, orig_box, atol=20.0):
"""Filter masks at the edge of a crop, but not at the edge of the original image."""
crop_box_torch = torch.as_tensor(crop_box, dtype=torch.float, device=boxes.device)
orig_box_torch = torch.as_tensor(orig_box, dtype=torch.float, device=boxes.device)
left, top, _, _ = crop_box
offset = torch.tensor([[left, top, left, top]], device=boxes.device)
# Check if boxes has a channel dimension
if len(boxes.shape) == 3:
offset = offset.unsqueeze(1)
boxes = (boxes + offset).float()
near_crop_edge = torch.isclose(boxes, crop_box_torch[None, :], atol=atol, rtol=0)
near_image_edge = torch.isclose(boxes, orig_box_torch[None, :], atol=atol, rtol=0)
near_crop_edge = torch.logical_and(near_crop_edge, ~near_image_edge)
return torch.any(near_crop_edge, dim=1)
def _is_box_near_crop_edge_tf(boxes, crop_box, orig_box, atol=20.0):
"""Filter masks at the edge of a crop, but not at the edge of the original image."""
crop_box_tf = tf.convert_to_tensor(crop_box, dtype=tf.float32)
orig_box_tf = tf.convert_to_tensor(orig_box, dtype=tf.float32)
left, top, _, _ = crop_box
offset = tf.convert_to_tensor([[left, top, left, top]])
# Check if boxes has a channel dimension
if len(boxes.shape) == 3:
offset = tf.expand_dims(offset, 1)
boxes = tf.cast(boxes + offset, tf.float32)
near_crop_edge = tnp.isclose(boxes, crop_box_tf[None, :], atol=atol, rtol=0)
near_image_edge = tnp.isclose(boxes, orig_box_tf[None, :], atol=atol, rtol=0)
near_crop_edge = tf.math.logical_and(near_crop_edge, ~near_image_edge)
return tf.reduce_any(near_crop_edge, axis=1)
def _batched_mask_to_box(masks: "torch.Tensor"):
"""
Computes the bounding boxes around the given input masks. The bounding boxes are in the XYXY format which
corresponds the following required indices:
- LEFT: left hand side of the bounding box
- TOP: top of the bounding box
- RIGHT: right of the bounding box
- BOTTOM: bottom of the bounding box
Return [0,0,0,0] for an empty mask. For input shape channel_1 x channel_2 x ... x height x width, the output shape
is channel_1 x channel_2 x ... x 4.
Args:
- masks (`torch.Tensor` of shape `(batch, nb_mask, height, width)`)
"""
# torch.max below raises an error on empty inputs, just skip in this case
if torch.numel(masks) == 0:
return torch.zeros(*masks.shape[:-2], 4, device=masks.device)
# Normalize shape to Cxheightxwidth
shape = masks.shape
height, width = shape[-2:]
# Get top and bottom edges
in_height, _ = torch.max(masks, dim=-1)
in_height_coords = in_height * torch.arange(height, device=in_height.device)[None, :]
bottom_edges, _ = torch.max(in_height_coords, dim=-1)
in_height_coords = in_height_coords + height * (~in_height)
top_edges, _ = torch.min(in_height_coords, dim=-1)
# Get left and right edges
in_width, _ = torch.max(masks, dim=-2)
in_width_coords = in_width * torch.arange(width, device=in_width.device)[None, :]
right_edges, _ = torch.max(in_width_coords, dim=-1)
in_width_coords = in_width_coords + width * (~in_width)
left_edges, _ = torch.min(in_width_coords, dim=-1)
# If the mask is empty the right edge will be to the left of the left edge.
# Replace these boxes with [0, 0, 0, 0]
empty_filter = (right_edges < left_edges) | (bottom_edges < top_edges)
out = torch.stack([left_edges, top_edges, right_edges, bottom_edges], dim=-1)
out = out * (~empty_filter).unsqueeze(-1)
# Return to original shape
out = out.reshape(*shape[:-2], 4)
return out
def _batched_mask_to_box_tf(masks: "tf.Tensor"):
"""
Computes the bounding boxes around the given input masks. The bounding boxes are in the XYXY format which
corresponds the following required indices:
- LEFT: left hand side of the bounding box
- TOP: top of the bounding box
- RIGHT: right of the bounding box
- BOTTOM: bottom of the bounding box
Return [0,0,0,0] for an empty mask. For input shape channel_1 x channel_2 x ... x height x width, the output shape
is channel_1 x channel_2 x ... x 4.
Args:
- masks (`tf.Tensor` of shape `(batch, nb_mask, height, width)`)
"""
if tf.size(masks) == 0:
return tf.zeros([*masks.shape[:-2], 4])
# Normalize shape to Cxheightxwidth
shape = shape_list(masks)
height, width = shape[-2:]
# Get top and bottom edges
in_height = tf.reduce_max(masks, axis=-1)
in_height_coords = in_height * tf.range(height)[None, :]
bottom_edges = tf.reduce_max(in_height_coords, axis=-1)
in_height_coords = in_height_coords + height * (~in_height)
top_edges = tf.reduce_min(in_height_coords, axis=-1)
# Get left and right edges
in_width, _ = tf.reduce_max(masks, axis=-2)
in_width_coords = in_width * tf.range(width)[None, :]
right_edges, _ = tf.reduce_max(in_width_coords, axis=-1)
in_width_coords = in_width_coords + width * (~in_width)
left_edges, _ = tf.reduce_min(in_width_coords, axis=-1)
# If the mask is empty the right edge will be to the left of the left edge.
# Replace these boxes with [0, 0, 0, 0]
empty_filter = (right_edges < left_edges) | (bottom_edges < top_edges)
out = tf.stack([left_edges, top_edges, right_edges, bottom_edges], axis=-1)
out = out * tf.expand_dims(~empty_filter, -1)
# Return to original shape
out = tf.reshape(out, *shape[:-2], 4)
return out
def _mask_to_rle_pytorch(input_mask: "torch.Tensor"):
"""
Encodes masks the run-length encoding (RLE), in the format expected by pycoco tools.
"""
# Put in fortran order and flatten height and width
batch_size, height, width = input_mask.shape
input_mask = input_mask.permute(0, 2, 1).flatten(1)
# Compute change indices
diff = input_mask[:, 1:] ^ input_mask[:, :-1]
change_indices = diff.nonzero()
# Encode run length
out = []
for i in range(batch_size):
cur_idxs = change_indices[change_indices[:, 0] == i, 1] + 1
btw_idxs = cur_idxs[1:] - cur_idxs[:-1]
counts = [] if input_mask[i, 0] == 0 else [0]
counts += [cur_idxs[0].item()] + btw_idxs.tolist() + [height * width - cur_idxs[-1]]
out.append({"size": [height, width], "counts": counts})
return out
def _mask_to_rle_tf(input_mask: "tf.Tensor"):
"""
Encodes masks the run-length encoding (RLE), in the format expected by pycoco tools.
"""
# Put in fortran order and flatten height and width
batch_size, height, width = input_mask.shape
input_mask = flatten(tf.transpose(input_mask, perm=(0, 2, 1)), 1)
# Compute change indices
diff = input_mask[:, 1:] ^ input_mask[:, :-1]
change_indices = tf.where(diff)
# Encode run length
out = []
for i in range(batch_size):
cur_idxs = change_indices[change_indices[:, 0] == i, 1] + 1
btw_idxs = cur_idxs[1:] - cur_idxs[:-1]
counts = [] if input_mask[i, 0] == 0 else [0]
counts += [cur_idxs[0].item()] + btw_idxs.tolist() + [height * width - cur_idxs[-1]]
out.append({"size": [height, width], "counts": counts})
return out
def _rle_to_mask(rle: Dict[str, Any]) -> np.ndarray:
"""Compute a binary mask from an uncompressed RLE."""
height, width = rle["size"]
mask = np.empty(height * width, dtype=bool)
idx = 0
parity = False
for count in rle["counts"]:
mask[idx : idx + count] = parity
idx += count
parity = not parity
mask = mask.reshape(width, height)
return mask.transpose() # Reshape to original shape
def _postprocess_for_mg(rle_masks, iou_scores, mask_boxes, amg_crops_nms_thresh=0.7):
"""
Perform NMS (Non Maximum Suppression) on the outputs.
Args:
rle_masks (`torch.Tensor`):
binary masks in the RLE format
iou_scores (`torch.Tensor` of shape (nb_masks, 1)):
iou_scores predicted by the model
mask_boxes (`torch.Tensor`):
The bounding boxes corresponding to segmentation masks
amg_crops_nms_thresh (`float`, *optional*, defaults to 0.7):
NMS threshold.
"""
keep_by_nms = batched_nms(
boxes=mask_boxes.float(),
scores=iou_scores,
idxs=torch.zeros(mask_boxes.shape[0]),
iou_threshold=amg_crops_nms_thresh,
)
iou_scores = iou_scores[keep_by_nms]
rle_masks = [rle_masks[i] for i in keep_by_nms]
mask_boxes = mask_boxes[keep_by_nms]
masks = [_rle_to_mask(rle) for rle in rle_masks]
return masks, iou_scores, rle_masks, mask_boxes
def _postprocess_for_mg_tf(rle_masks, iou_scores, mask_boxes, amg_crops_nms_thresh=0.7):
"""
Perform NMS (Non Maximum Suppression) on the outputs.
Args:
rle_masks (`tf.Tensor`):
binary masks in the RLE format
iou_scores (`tf.Tensor` of shape (nb_masks, 1)):
iou_scores predicted by the model
mask_boxes (`tf.Tensor`):
The bounding boxes corresponding to segmentation masks
amg_crops_nms_thresh (`float`, *optional*, defaults to 0.7):
NMS threshold.
"""
keep_by_nms = tf.image.combined_non_max_suppression(
boxes=mask_boxes.float(),
scores=iou_scores,
idxs=torch.zeros(mask_boxes.shape[0]),
iou_threshold=amg_crops_nms_thresh,
)
iou_scores = iou_scores[keep_by_nms]
rle_masks = [rle_masks[i] for i in keep_by_nms]
mask_boxes = mask_boxes[keep_by_nms]
masks = [_rle_to_mask(rle) for rle in rle_masks]
return masks, iou_scores, rle_masks, mask_boxes
| 57,242 | 43.79108 | 119 | py |
transformers | transformers-main/src/transformers/models/sam/processing_sam.py | # coding=utf-8
# Copyright 2023 The HuggingFace Inc. team.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
"""
Processor class for SAM.
"""
from copy import deepcopy
from typing import Optional, Union
import numpy as np
from ...processing_utils import ProcessorMixin
from ...tokenization_utils_base import BatchEncoding
from ...utils import TensorType, is_tf_available, is_torch_available
if is_torch_available():
import torch
if is_tf_available():
import tensorflow as tf
class SamProcessor(ProcessorMixin):
r"""
Constructs a SAM processor which wraps a SAM image processor and an 2D points & Bounding boxes processor into a
single processor.
[`SamProcessor`] offers all the functionalities of [`SamImageProcessor`]. See the docstring of
[`~SamImageProcessor.__call__`] for more information.
Args:
image_processor (`SamImageProcessor`):
An instance of [`SamImageProcessor`]. The image processor is a required input.
"""
attributes = ["image_processor"]
image_processor_class = "SamImageProcessor"
def __init__(self, image_processor):
super().__init__(image_processor)
self.current_processor = self.image_processor
self.point_pad_value = -10
self.target_size = self.image_processor.size["longest_edge"]
def __call__(
self,
images=None,
input_points=None,
input_labels=None,
input_boxes=None,
return_tensors: Optional[Union[str, TensorType]] = None,
**kwargs,
) -> BatchEncoding:
"""
This method uses [`SamImageProcessor.__call__`] method to prepare image(s) for the model. It also prepares 2D
points and bounding boxes for the model if they are provided.
"""
encoding_image_processor = self.image_processor(
images,
return_tensors=return_tensors,
**kwargs,
)
# pop arguments that are not used in the foward but used nevertheless
original_sizes = encoding_image_processor["original_sizes"]
if hasattr(original_sizes, "numpy"): # Checks if Torch or TF tensor
original_sizes = original_sizes.numpy()
input_points, input_labels, input_boxes = self._check_and_preprocess_points(
input_points=input_points,
input_labels=input_labels,
input_boxes=input_boxes,
)
encoding_image_processor = self._normalize_and_convert(
encoding_image_processor,
original_sizes,
input_points=input_points,
input_labels=input_labels,
input_boxes=input_boxes,
return_tensors=return_tensors,
)
return encoding_image_processor
def _normalize_and_convert(
self,
encoding_image_processor,
original_sizes,
input_points=None,
input_labels=None,
input_boxes=None,
return_tensors="pt",
):
if input_points is not None:
if len(original_sizes) != len(input_points):
input_points = [
self._normalize_coordinates(self.target_size, point, original_sizes[0]) for point in input_points
]
else:
input_points = [
self._normalize_coordinates(self.target_size, point, original_size)
for point, original_size in zip(input_points, original_sizes)
]
# check that all arrays have the same shape
if not all(point.shape == input_points[0].shape for point in input_points):
if input_labels is not None:
input_points, input_labels = self._pad_points_and_labels(input_points, input_labels)
input_points = np.array(input_points)
if input_labels is not None:
input_labels = np.array(input_labels)
if input_boxes is not None:
if len(original_sizes) != len(input_boxes):
input_boxes = [
self._normalize_coordinates(self.target_size, box, original_sizes[0], is_bounding_box=True)
for box in input_boxes
]
else:
input_boxes = [
self._normalize_coordinates(self.target_size, box, original_size, is_bounding_box=True)
for box, original_size in zip(input_boxes, original_sizes)
]
input_boxes = np.array(input_boxes)
if input_boxes is not None:
if return_tensors == "pt":
input_boxes = torch.from_numpy(input_boxes)
# boxes batch size of 1 by default
input_boxes = input_boxes.unsqueeze(1) if len(input_boxes.shape) != 3 else input_boxes
elif return_tensors == "tf":
input_boxes = tf.convert_to_tensor(input_boxes)
# boxes batch size of 1 by default
input_boxes = tf.expand_dims(input_boxes, 1) if len(input_boxes.shape) != 3 else input_boxes
encoding_image_processor.update({"input_boxes": input_boxes})
if input_points is not None:
if return_tensors == "pt":
input_points = torch.from_numpy(input_points)
# point batch size of 1 by default
input_points = input_points.unsqueeze(1) if len(input_points.shape) != 4 else input_points
elif return_tensors == "tf":
input_points = tf.convert_to_tensor(input_points)
# point batch size of 1 by default
input_points = tf.expand_dims(input_points, 1) if len(input_points.shape) != 4 else input_points
encoding_image_processor.update({"input_points": input_points})
if input_labels is not None:
if return_tensors == "pt":
input_labels = torch.from_numpy(input_labels)
# point batch size of 1 by default
input_labels = input_labels.unsqueeze(1) if len(input_labels.shape) != 3 else input_labels
elif return_tensors == "tf":
input_labels = tf.convert_to_tensor(input_labels)
# point batch size of 1 by default
input_labels = tf.expand_dims(input_labels, 1) if len(input_labels.shape) != 3 else input_labels
encoding_image_processor.update({"input_labels": input_labels})
return encoding_image_processor
def _pad_points_and_labels(self, input_points, input_labels):
r"""
The method pads the 2D points and labels to the maximum number of points in the batch.
"""
expected_nb_points = max([point.shape[0] for point in input_points])
processed_input_points = []
for i, point in enumerate(input_points):
if point.shape[0] != expected_nb_points:
point = np.concatenate(
[point, np.zeros((expected_nb_points - point.shape[0], 2)) + self.point_pad_value], axis=0
)
input_labels[i] = np.append(input_labels[i], [self.point_pad_value])
processed_input_points.append(point)
input_points = processed_input_points
return input_points, input_labels
def _normalize_coordinates(
self, target_size: int, coords: np.ndarray, original_size, is_bounding_box=False
) -> np.ndarray:
"""
Expects a numpy array of length 2 in the final dimension. Requires the original image size in (H, W) format.
"""
old_h, old_w = original_size
new_h, new_w = self.image_processor._get_preprocess_shape(original_size, longest_edge=target_size)
coords = deepcopy(coords).astype(float)
if is_bounding_box:
coords = coords.reshape(-1, 2, 2)
coords[..., 0] = coords[..., 0] * (new_w / old_w)
coords[..., 1] = coords[..., 1] * (new_h / old_h)
if is_bounding_box:
coords = coords.reshape(-1, 4)
return coords
def _check_and_preprocess_points(
self,
input_points=None,
input_labels=None,
input_boxes=None,
):
r"""
Check and preprocesses the 2D points, labels and bounding boxes. It checks if the input is valid and if they
are, it converts the coordinates of the points and bounding boxes. If a user passes directly a `torch.Tensor`,
it is converted to a `numpy.ndarray` and then to a `list`.
"""
if input_points is not None:
if hasattr(input_points, "numpy"): # Checks for TF or Torch tensor
input_points = input_points.numpy().tolist()
if not isinstance(input_points, list) or not isinstance(input_points[0], list):
raise ValueError("Input points must be a list of list of floating points.")
input_points = [np.array(input_point) for input_point in input_points]
else:
input_points = None
if input_labels is not None:
if hasattr(input_labels, "numpy"):
input_labels = input_labels.numpy().tolist()
if not isinstance(input_labels, list) or not isinstance(input_labels[0], list):
raise ValueError("Input labels must be a list of list integers.")
input_labels = [np.array(label) for label in input_labels]
else:
input_labels = None
if input_boxes is not None:
if hasattr(input_boxes, "numpy"):
input_boxes = input_boxes.numpy().tolist()
if (
not isinstance(input_boxes, list)
or not isinstance(input_boxes[0], list)
or not isinstance(input_boxes[0][0], list)
):
raise ValueError("Input boxes must be a list of list of list of floating points.")
input_boxes = [np.array(box).astype(np.float32) for box in input_boxes]
else:
input_boxes = None
return input_points, input_labels, input_boxes
@property
def model_input_names(self):
image_processor_input_names = self.image_processor.model_input_names
return list(dict.fromkeys(image_processor_input_names))
def post_process_masks(self, *args, **kwargs):
return self.image_processor.post_process_masks(*args, **kwargs)
| 10,848 | 40.094697 | 118 | py |
transformers | transformers-main/src/transformers/models/sam/modeling_sam.py | # coding=utf-8
# Copyright 2023 The Meta AI Authors and The HuggingFace Team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
""" PyTorch SAM model."""
import collections
import math
from dataclasses import dataclass
from typing import Dict, List, Optional, Tuple, Union
import numpy as np
import torch
import torch.nn.functional as F
import torch.utils.checkpoint
from torch import Tensor, nn
from ...activations import ACT2FN
from ...modeling_outputs import BaseModelOutput
from ...modeling_utils import PreTrainedModel
from ...utils import ModelOutput, add_start_docstrings, add_start_docstrings_to_model_forward, logging
from .configuration_sam import SamConfig, SamMaskDecoderConfig, SamPromptEncoderConfig, SamVisionConfig
logger = logging.get_logger(__name__)
_CONFIG_FOR_DOC = "SamConfig"
_CHECKPOINT_FOR_DOC = "facebook/sam-vit-huge"
SAM_PRETRAINED_MODEL_ARCHIVE_LIST = [
"facebook/sam-vit-huge",
"facebook/sam-vit-large",
"facebook/sam-vit-base",
# See all SAM models at https://huggingface.co/models?filter=sam
]
@dataclass
class SamVisionEncoderOutput(ModelOutput):
"""
Base class for sam vision model's outputs that also contains image embeddings obtained by applying the projection
layer to the pooler_output.
Args:
image_embeds (`torch.FloatTensor` of shape `(batch_size, output_dim)` *optional* returned when model is initialized with `with_projection=True`):
The image embeddings obtained by applying the projection layer to the pooler_output.
last_hidden_state (`torch.FloatTensor` of shape `(batch_size, sequence_length, hidden_size)`):
Sequence of hidden-states at the output of the last layer of the model.
hidden_states (`tuple(torch.FloatTensor)`, *optional*, returned when `output_hidden_states=True` is passed or when `config.output_hidden_states=True`):
Tuple of `torch.FloatTensor` (one for the output of the embeddings, if the model has an embedding layer, +
one for the output of each layer) of shape `(batch_size, sequence_length, hidden_size)`.
Hidden-states of the model at the output of each layer plus the optional initial embedding outputs.
attentions (`tuple(torch.FloatTensor)`, *optional*, returned when `output_attentions=True` is passed or when `config.output_attentions=True`):
Tuple of `torch.FloatTensor` (one for each layer) of shape `(batch_size, num_heads, sequence_length,
sequence_length)`.
Attentions weights after the attention softmax, used to compute the weighted average in the self-attention
heads.
"""
image_embeds: Optional[torch.FloatTensor] = None
last_hidden_state: torch.FloatTensor = None
hidden_states: Optional[Tuple[torch.FloatTensor]] = None
attentions: Optional[Tuple[torch.FloatTensor]] = None
@dataclass
class SamImageSegmentationOutput(ModelOutput):
"""
Base class for Segment-Anything model's output
Args:
iou_scores (`torch.FloatTensor` of shape `(batch_size, num_masks)`):
The iou scores of the predicted masks.
pred_masks (`torch.FloatTensor` of shape `(batch_size, num_masks, height, width)`):
The predicted low resolutions masks. Needs to be post-processed by the processor
vision_hidden_states (`tuple(torch.FloatTensor)`, *optional*, returned when `output_hidden_states=True` is passed or when `config.output_hidden_states=True`):
Tuple of `torch.FloatTensor` (one for the output of the embeddings, if the model has an embedding layer, +
one for the output of each layer) of shape `(batch_size, sequence_length, hidden_size)`.
Hidden-states of the vision model at the output of each layer plus the optional initial embedding outputs.
vision_attentions (`tuple(torch.FloatTensor)`, *optional*, returned when `output_attentions=True` is passed or when `config.output_attentions=True`):
Tuple of `torch.FloatTensor` (one for each layer) of shape `(batch_size, num_heads, sequence_length,
sequence_length)`.
Attentions weights after the attention softmax, used to compute the weighted average in the self-attention
heads.
mask_decoder_attentions (`tuple(torch.FloatTensor)`, *optional*, returned when `output_attentions=True` is passed or when `config.output_attentions=True`):
Tuple of `torch.FloatTensor` (one for each layer) of shape `(batch_size, num_heads, sequence_length,
sequence_length)`.
Attentions weights after the attention softmax, used to compute the weighted average in the self-attention
heads.
"""
iou_scores: torch.FloatTensor = None
pred_masks: torch.FloatTensor = None
vision_hidden_states: Optional[Tuple[torch.FloatTensor]] = None
vision_attentions: Optional[Tuple[torch.FloatTensor]] = None
mask_decoder_attentions: Optional[Tuple[torch.FloatTensor]] = None
class SamPatchEmbeddings(nn.Module):
"""
This class turns `pixel_values` of shape `(batch_size, num_channels, height, width)` into the initial
`hidden_states` (patch embeddings) of shape `(batch_size, seq_length, hidden_size)` to be consumed by a
Transformer.
"""
def __init__(self, config):
super().__init__()
image_size, patch_size = config.image_size, config.patch_size
num_channels, hidden_size = config.num_channels, config.hidden_size
image_size = image_size if isinstance(image_size, collections.abc.Iterable) else (image_size, image_size)
patch_size = patch_size if isinstance(patch_size, collections.abc.Iterable) else (patch_size, patch_size)
num_patches = (image_size[1] // patch_size[1]) * (image_size[0] // patch_size[0])
self.image_size = image_size
self.patch_size = patch_size
self.num_channels = num_channels
self.num_patches = num_patches
self.projection = nn.Conv2d(num_channels, hidden_size, kernel_size=patch_size, stride=patch_size)
def forward(self, pixel_values):
batch_size, num_channels, height, width = pixel_values.shape
if num_channels != self.num_channels:
raise ValueError(
"Make sure that the channel dimension of the pixel values match with the one set in the configuration."
)
if height != self.image_size[0] or width != self.image_size[1]:
raise ValueError(
f"Input image size ({height}*{width}) doesn't match model ({self.image_size[0]}*{self.image_size[1]})."
)
embeddings = self.projection(pixel_values).permute(0, 2, 3, 1)
return embeddings
class SamMLPBlock(nn.Module):
def __init__(self, config):
super().__init__()
self.lin1 = nn.Linear(config.hidden_size, config.mlp_dim)
self.lin2 = nn.Linear(config.mlp_dim, config.hidden_size)
self.act = ACT2FN[config.hidden_act]
def forward(self, hidden_states: torch.Tensor) -> torch.Tensor:
hidden_states = self.lin1(hidden_states)
hidden_states = self.act(hidden_states)
hidden_states = self.lin2(hidden_states)
return hidden_states
# Copied from transformers.models.convnext.modeling_convnext.ConvNextLayerNorm with ConvNext->Sam
class SamLayerNorm(nn.Module):
r"""LayerNorm that supports two data formats: channels_last (default) or channels_first.
The ordering of the dimensions in the inputs. channels_last corresponds to inputs with shape (batch_size, height,
width, channels) while channels_first corresponds to inputs with shape (batch_size, channels, height, width).
"""
def __init__(self, normalized_shape, eps=1e-6, data_format="channels_last"):
super().__init__()
self.weight = nn.Parameter(torch.ones(normalized_shape))
self.bias = nn.Parameter(torch.zeros(normalized_shape))
self.eps = eps
self.data_format = data_format
if self.data_format not in ["channels_last", "channels_first"]:
raise NotImplementedError(f"Unsupported data format: {self.data_format}")
self.normalized_shape = (normalized_shape,)
def forward(self, x: torch.Tensor) -> torch.Tensor:
if self.data_format == "channels_last":
x = torch.nn.functional.layer_norm(x, self.normalized_shape, self.weight, self.bias, self.eps)
elif self.data_format == "channels_first":
input_dtype = x.dtype
x = x.float()
u = x.mean(1, keepdim=True)
s = (x - u).pow(2).mean(1, keepdim=True)
x = (x - u) / torch.sqrt(s + self.eps)
x = x.to(dtype=input_dtype)
x = self.weight[:, None, None] * x + self.bias[:, None, None]
return x
class SamAttention(nn.Module):
"""
SAM's attention layer that allows for downscaling the size of the embedding after projection to queries, keys, and
values.
"""
def __init__(self, config, downsample_rate=None):
super().__init__()
self.hidden_size = config.hidden_size
downsample_rate = config.attention_downsample_rate if downsample_rate is None else downsample_rate
self.internal_dim = config.hidden_size // downsample_rate
self.num_attention_heads = config.num_attention_heads
if self.internal_dim % config.num_attention_heads != 0:
raise ValueError("num_attention_heads must divide hidden_size.")
self.q_proj = nn.Linear(self.hidden_size, self.internal_dim)
self.k_proj = nn.Linear(self.hidden_size, self.internal_dim)
self.v_proj = nn.Linear(self.hidden_size, self.internal_dim)
self.out_proj = nn.Linear(self.internal_dim, self.hidden_size)
def _separate_heads(self, hidden_states: Tensor, num_attention_heads: int) -> Tensor:
batch, point_batch_size, n_tokens, channel = hidden_states.shape
c_per_head = channel // num_attention_heads
hidden_states = hidden_states.reshape(batch * point_batch_size, n_tokens, num_attention_heads, c_per_head)
return hidden_states.transpose(1, 2)
def _recombine_heads(self, hidden_states: Tensor, point_batch_size: int) -> Tensor:
batch, n_heads, n_tokens, c_per_head = hidden_states.shape
hidden_states = hidden_states.transpose(1, 2)
return hidden_states.reshape(batch // point_batch_size, point_batch_size, n_tokens, n_heads * c_per_head)
def forward(self, query: Tensor, key: Tensor, value: Tensor, attention_similarity: Tensor = None) -> Tensor:
# Input projections
query = self.q_proj(query)
key = self.k_proj(key)
value = self.v_proj(value)
point_batch_size = query.shape[1]
# Separate into heads
query = self._separate_heads(query, self.num_attention_heads)
key = self._separate_heads(key, self.num_attention_heads)
value = self._separate_heads(value, self.num_attention_heads)
# SamAttention
_, _, _, c_per_head = query.shape
attn = query @ key.permute(0, 1, 3, 2) # batch_size * point_batch_size x N_heads x N_tokens x N_tokens
attn = attn / math.sqrt(c_per_head)
attn = torch.softmax(attn, dim=-1)
if attention_similarity is not None:
attn = attn + attention_similarity
attn = torch.softmax(attn, dim=-1)
# Get output
out = attn @ value
out = self._recombine_heads(out, point_batch_size)
out = self.out_proj(out)
return out
class SamTwoWayAttentionBlock(nn.Module):
def __init__(self, config, attention_downsample_rate: int = 2, skip_first_layer_pe: bool = False):
"""
A transformer block with four layers:
(1) self-attention of sparse inputs (2) cross attention of sparse inputs -> dense inputs (3) mlp block on
sparse inputs (4) cross attention of dense inputs -> sparse inputs
Arguments:
config (`SamMaskDecoderConfig`):
The configuration file used to instantiate the block
attention_downsample_rate (*optionalk*, int, defaults to 2):
The downsample ratio of the block used to reduce the inner dim of the attention.
skip_first_layer_pe (*optional*, bool, defaults to `False`):
Whether or not to skip the addition of the query_point_embedding on the first layer.
"""
super().__init__()
self.hidden_size = config.hidden_size
self.layer_norm_eps = config.layer_norm_eps
self.self_attn = SamAttention(config, downsample_rate=1)
self.layer_norm1 = nn.LayerNorm(self.hidden_size, eps=self.layer_norm_eps)
self.cross_attn_token_to_image = SamAttention(config, downsample_rate=attention_downsample_rate)
self.layer_norm2 = nn.LayerNorm(self.hidden_size, eps=self.layer_norm_eps)
self.mlp = SamMLPBlock(config)
self.layer_norm3 = nn.LayerNorm(self.hidden_size, eps=self.layer_norm_eps)
self.layer_norm4 = nn.LayerNorm(self.hidden_size, eps=self.layer_norm_eps)
self.cross_attn_image_to_token = SamAttention(config, downsample_rate=attention_downsample_rate)
self.skip_first_layer_pe = skip_first_layer_pe
def forward(
self,
queries: Tensor,
keys: Tensor,
query_point_embedding: Tensor,
key_point_embedding: Tensor,
attention_similarity: Tensor,
output_attentions: bool = False,
):
# Self attention block
if self.skip_first_layer_pe:
queries = self.self_attn(query=queries, key=queries, value=queries)
else:
query = queries + query_point_embedding
attn_out = self.self_attn(query=query, key=query, value=queries)
queries = queries + attn_out
queries = self.layer_norm1(queries)
# Cross attention block, tokens attending to image embedding
query = queries + query_point_embedding
key = keys + key_point_embedding
attn_out = self.cross_attn_token_to_image(
query=query, key=key, value=keys, attention_similarity=attention_similarity
)
queries = queries + attn_out
queries = self.layer_norm2(queries)
# MLP block
mlp_out = self.mlp(queries)
queries = queries + mlp_out
queries = self.layer_norm3(queries)
# Cross attention block, image embedding attending to tokens
query = queries + query_point_embedding
key = keys + key_point_embedding
attn_out = self.cross_attn_image_to_token(query=key, key=query, value=queries)
keys = keys + attn_out
keys = self.layer_norm4(keys)
outputs = (queries, keys)
if output_attentions:
outputs = outputs + (attn_out,)
else:
outputs = outputs + (None,)
return outputs
class SamTwoWayTransformer(nn.Module):
def __init__(self, config: SamMaskDecoderConfig):
super().__init__()
self.config = config
self.num_hidden_layers = config.num_hidden_layers
self.layers = nn.ModuleList()
for i in range(self.num_hidden_layers):
self.layers.append(SamTwoWayAttentionBlock(config, skip_first_layer_pe=(i == 0)))
self.final_attn_token_to_image = SamAttention(config)
self.layer_norm_final_attn = nn.LayerNorm(config.hidden_size)
def forward(
self,
point_embeddings: Tensor,
image_embeddings: Tensor,
image_positional_embeddings: Tensor,
attention_similarity: Tensor,
target_embedding=None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[Tuple, BaseModelOutput]:
output_attentions = output_attentions if output_attentions is not None else self.config.output_attentions
output_hidden_states = (
output_hidden_states if output_hidden_states is not None else self.config.output_hidden_states
)
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
all_attentions = ()
if image_embeddings is None:
raise ValueError("You have to specify an image_embedding")
image_embeddings = image_embeddings.flatten(2).permute(0, 2, 1).unsqueeze(1)
image_positional_embeddings = image_positional_embeddings.flatten(2).permute(0, 2, 1).unsqueeze(1)
# Prepare queries
queries = point_embeddings
keys = image_embeddings
# Apply transformer blocks and final layernorm
for layer in self.layers:
if target_embedding is not None:
queries += target_embedding
queries, keys, attention_outputs = layer(
queries=queries,
keys=keys,
query_point_embedding=point_embeddings,
key_point_embedding=image_positional_embeddings,
attention_similarity=attention_similarity,
output_attentions=output_attentions,
)
if output_attentions:
all_attentions = all_attentions + (attention_outputs,)
# Apply the final attenion layer from the points to the image
query = queries + point_embeddings
key = keys + image_positional_embeddings
attn_out = self.final_attn_token_to_image(query=query, key=key, value=keys)
queries = queries + attn_out
queries = self.layer_norm_final_attn(queries)
return queries, keys, all_attentions
class SamFeedForward(nn.Module):
def __init__(
self, input_dim: int, hidden_dim: int, output_dim: int, num_layers: int, sigmoid_output: bool = False
):
super().__init__()
self.num_layers = num_layers
self.activation = nn.ReLU()
self.proj_in = nn.Linear(input_dim, hidden_dim)
self.proj_out = nn.Linear(hidden_dim, output_dim)
self.layers = nn.ModuleList([nn.Linear(hidden_dim, hidden_dim) for _ in range(num_layers - 2)])
self.sigmoid_output = sigmoid_output
def forward(self, hidden_states):
hidden_states = self.proj_in(hidden_states)
hidden_states = self.activation(hidden_states)
for layer in self.layers:
hidden_states = self.activation(layer(hidden_states))
hidden_states = self.proj_out(hidden_states)
if self.sigmoid_output:
hidden_states = F.sigmoid(hidden_states)
return hidden_states
class SamMaskDecoder(nn.Module):
def __init__(self, config: SamMaskDecoderConfig):
super().__init__()
self.hidden_size = config.hidden_size
self.num_multimask_outputs = config.num_multimask_outputs
self.num_mask_tokens = config.num_multimask_outputs + 1
self.iou_token = nn.Embedding(1, self.hidden_size)
self.mask_tokens = nn.Embedding(self.num_mask_tokens, self.hidden_size)
self.transformer = SamTwoWayTransformer(config)
# should we create a new class for this?
self.upscale_conv1 = nn.ConvTranspose2d(self.hidden_size, self.hidden_size // 4, kernel_size=2, stride=2)
self.upscale_conv2 = nn.ConvTranspose2d(self.hidden_size // 4, self.hidden_size // 8, kernel_size=2, stride=2)
self.upscale_layer_norm = SamLayerNorm(self.hidden_size // 4, data_format="channels_first")
self.activation = nn.GELU()
mlps_list = []
for _ in range(self.num_mask_tokens):
mlps_list += [SamFeedForward(self.hidden_size, self.hidden_size, self.hidden_size // 8, 3)]
self.output_hypernetworks_mlps = nn.ModuleList(mlps_list)
self.iou_prediction_head = SamFeedForward(
self.hidden_size, config.iou_head_hidden_dim, self.num_mask_tokens, config.iou_head_depth
)
def forward(
self,
image_embeddings: torch.Tensor,
image_positional_embeddings: torch.Tensor,
sparse_prompt_embeddings: torch.Tensor,
dense_prompt_embeddings: torch.Tensor,
multimask_output: bool,
output_attentions: Optional[bool] = None,
attention_similarity: torch.Tensor = None,
target_embedding: torch.Tensor = None,
) -> Tuple[torch.Tensor, torch.Tensor]:
"""
Predict masks given image and prompt embeddings.
Args:
image_embeddings (`torch.Tensor`):
the embeddings from the image encoder
image_positional_embedding (`torch.Tensor`):
positional encoding with the shape of image_embeddings
sparse_prompt_embeddings (`torch.Tensor`):
The embeddings of the points and boxes
dense_prompt_embeddings (`torch.Tensor`):
the embeddings of the mask inputs
multimask_output (bool):
Whether to return multiple masks or a single mask.
output_attentions (bool, *optional*):
Whether or not to return the attentions tensors of all attention layers.
"""
batch_size, num_channels, height, width = image_embeddings.shape
point_batch_size = sparse_prompt_embeddings.shape[1]
# Concatenate output tokens
output_tokens = torch.cat([self.iou_token.weight, self.mask_tokens.weight], dim=0)
output_tokens = output_tokens.repeat(batch_size, point_batch_size, 1, 1)
if sparse_prompt_embeddings.sum().item() != 0:
tokens = torch.cat((output_tokens, sparse_prompt_embeddings), dim=2)
else:
tokens = output_tokens
point_embeddings = tokens.to(self.iou_token.weight.dtype)
# Expand per-image data in batch direction to be per-point
image_embeddings = image_embeddings + dense_prompt_embeddings
image_embeddings = image_embeddings.repeat(point_batch_size, 1, 1, 1)
image_positional_embeddings = image_positional_embeddings.repeat(point_batch_size, 1, 1, 1)
# Run the transformer, image_positional_embedding are consumed
point_embedding, image_embeddings, attentions = self.transformer(
point_embeddings=point_embeddings,
image_embeddings=image_embeddings,
image_positional_embeddings=image_positional_embeddings,
attention_similarity=attention_similarity,
target_embedding=target_embedding,
output_attentions=output_attentions,
)
iou_token_out = point_embedding[:, :, 0, :]
mask_tokens_out = point_embedding[:, :, 1 : (1 + self.num_mask_tokens), :]
# Upscale mask embeddings and predict masks using the mask tokens
image_embeddings = image_embeddings.transpose(2, 3).reshape(
batch_size * point_batch_size, num_channels, height, width
)
upscaled_embedding = self.upscale_conv1(image_embeddings)
upscaled_embedding = self.activation(self.upscale_layer_norm(upscaled_embedding))
upscaled_embedding = self.activation(self.upscale_conv2(upscaled_embedding))
hyper_in_list = []
for i in range(self.num_mask_tokens):
current_mlp = self.output_hypernetworks_mlps[i]
hyper_in_list += [current_mlp(mask_tokens_out[:, :, i, :])]
hyper_in = torch.stack(hyper_in_list, dim=2)
_, num_channels, height, width = upscaled_embedding.shape
upscaled_embedding = upscaled_embedding.reshape(batch_size, point_batch_size, num_channels, height * width)
masks = (hyper_in @ upscaled_embedding).reshape(batch_size, point_batch_size, -1, height, width)
# Generate mask quality predictions
iou_pred = self.iou_prediction_head(iou_token_out)
# Select the correct mask or masks for output
if multimask_output:
mask_slice = slice(1, None)
else:
mask_slice = slice(0, 1)
masks = masks[:, :, mask_slice, :, :]
iou_pred = iou_pred[:, :, mask_slice]
outputs = (masks, iou_pred)
if output_attentions:
outputs = outputs + (attentions,)
else:
outputs = outputs + (None,)
return outputs
class SamPositionalEmbedding(nn.Module):
def __init__(self, config):
super().__init__()
self.scale = config.hidden_size // 2
self.register_buffer("positional_embedding", self.scale * torch.randn((2, config.num_pos_feats)))
def forward(self, input_coords, input_shape=None):
"""Positionally encode points that are normalized to [0,1]."""
coordinates = input_coords.clone()
if input_shape is not None:
coordinates[:, :, :, 0] = coordinates[:, :, :, 0] / input_shape[1]
coordinates[:, :, :, 1] = coordinates[:, :, :, 1] / input_shape[0]
# assuming coords are in [0, 1]^2 square and have d_1 x ... x d_n x 2 shape
coordinates = 2 * coordinates - 1
coordinates = coordinates.to(self.positional_embedding.dtype)
coordinates = coordinates @ self.positional_embedding
coordinates = 2 * np.pi * coordinates
# outputs d_1 x ... x d_n x channel shape
return torch.cat([torch.sin(coordinates), torch.cos(coordinates)], dim=-1)
class SamMaskEmbedding(nn.Module):
def __init__(self, config: SamPromptEncoderConfig):
super().__init__()
self.mask_input_channels = config.mask_input_channels // 4
self.activation = ACT2FN[config.hidden_act]
self.conv1 = nn.Conv2d(1, self.mask_input_channels, kernel_size=2, stride=2)
self.conv2 = nn.Conv2d(self.mask_input_channels, config.mask_input_channels, kernel_size=2, stride=2)
self.conv3 = nn.Conv2d(config.mask_input_channels, config.hidden_size, kernel_size=1)
self.layer_norm1 = SamLayerNorm(
self.mask_input_channels, eps=config.layer_norm_eps, data_format="channels_first"
)
self.layer_norm2 = SamLayerNorm(
self.mask_input_channels * 4, eps=config.layer_norm_eps, data_format="channels_first"
)
def forward(self, masks):
hidden_states = self.conv1(masks)
hidden_states = self.layer_norm1(hidden_states)
hidden_states = self.activation(hidden_states)
hidden_states = self.conv2(hidden_states)
hidden_states = self.layer_norm2(hidden_states)
hidden_states = self.activation(hidden_states)
dense_embeddings = self.conv3(hidden_states)
return dense_embeddings
class SamPromptEncoder(nn.Module):
def __init__(self, config: SamPromptEncoderConfig, shared_patch_embedding):
super().__init__()
self.shared_embedding = shared_patch_embedding
self.mask_embed = SamMaskEmbedding(config)
self.no_mask_embed = nn.Embedding(1, config.hidden_size)
self.image_embedding_size = (config.image_embedding_size, config.image_embedding_size)
self.input_image_size = config.image_size
self.point_embed = nn.ModuleList(
[nn.Embedding(1, config.hidden_size) for i in range(config.num_point_embeddings)]
)
self.hidden_size = config.hidden_size
self.not_a_point_embed = nn.Embedding(1, config.hidden_size)
def _embed_points(self, points: torch.Tensor, labels: torch.Tensor, pad: bool) -> torch.Tensor:
"""Embeds point prompts."""
points = points + 0.5 # Shift to center of pixel
if pad:
target_point_shape = (points.shape[0], points.shape[1], 1, points.shape[-1])
target_labels_shape = (points.shape[0], points.shape[1], 1)
padding_point = torch.zeros(target_point_shape, device=points.device)
padding_label = -torch.ones(target_labels_shape, device=labels.device)
points = torch.cat([points, padding_point], dim=2)
labels = torch.cat([labels, padding_label], dim=2)
input_shape = (self.input_image_size, self.input_image_size)
point_embedding = self.shared_embedding(points, input_shape)
# torch.where and expanding the labels tensor is required by the ONNX export
point_embedding = torch.where(labels[..., None] == -1, self.not_a_point_embed.weight, point_embedding)
# This is required for the ONNX export. The dtype, device need to be explicitely
# specificed as otherwise torch.onnx.export interprets as double
point_embedding = torch.where(
labels[..., None] != -10,
point_embedding,
torch.tensor(0.0, dtype=point_embedding.dtype, device=point_embedding.device),
)
point_embedding = torch.where(
(labels == 0)[:, :, :, None],
point_embedding + self.point_embed[0].weight[None, None, :, :],
point_embedding,
)
point_embedding = torch.where(
(labels == 1)[:, :, :, None],
point_embedding + self.point_embed[1].weight[None, None, :, :],
point_embedding,
)
return point_embedding
def _embed_boxes(self, boxes: torch.Tensor) -> torch.Tensor:
"""Embeds box prompts."""
boxes = boxes + 0.5 # Shift to center of pixel
batch_size, nb_boxes = boxes.shape[:2]
coords = boxes.reshape(batch_size, nb_boxes, 2, 2)
input_shape = (self.input_image_size, self.input_image_size)
corner_embedding = self.shared_embedding(coords, input_shape)
corner_embedding[:, :, 0, :] += self.point_embed[2].weight
corner_embedding[:, :, 1, :] += self.point_embed[3].weight
return corner_embedding
def forward(
self,
input_points: Optional[Tuple[torch.Tensor, torch.Tensor]],
input_labels: Optional[torch.Tensor],
input_boxes: Optional[torch.Tensor],
input_masks: Optional[torch.Tensor],
) -> Tuple[torch.Tensor, torch.Tensor]:
"""
Embeds different types of prompts, returning both sparse and dense embeddings.
Args:
points (`torch.Tensor`, *optional*):
point coordinates and labels to embed.
boxes (`torch.Tensor`, *optional*):
boxes to embed
masks (`torch.Tensor`, *optional*):
masks to embed
"""
sparse_embeddings = None
batch_size = 1
target_device = self.shared_embedding.positional_embedding.device
if input_points is not None:
batch_size, point_batch_size = input_points.shape[:2]
if input_labels is None:
raise ValueError("If points are provided, labels must also be provided.")
point_embeddings = self._embed_points(input_points, input_labels, pad=(input_boxes is None))
sparse_embeddings = point_embeddings
if input_boxes is not None:
batch_size = input_boxes.shape[0]
box_embeddings = self._embed_boxes(input_boxes)
if sparse_embeddings is None:
sparse_embeddings = box_embeddings
else:
sparse_embeddings = torch.cat([sparse_embeddings, box_embeddings], dim=2)
if input_masks is not None:
dense_embeddings = self.mask_embed(input_masks)
else:
dense_embeddings = self.no_mask_embed.weight.reshape(1, -1, 1, 1).expand(
batch_size, -1, self.image_embedding_size[0], self.image_embedding_size[1]
)
if sparse_embeddings is None:
sparse_embeddings = torch.zeros((batch_size, 1, 1, self.hidden_size), device=target_device)
return sparse_embeddings, dense_embeddings
class SamVisionAttention(nn.Module):
"""Multi-head Attention block with relative position embeddings."""
def __init__(self, config, window_size):
super().__init__()
input_size = (
(config.image_size // config.patch_size, config.image_size // config.patch_size)
if window_size == 0
else (window_size, window_size)
)
self.num_attention_heads = config.num_attention_heads
head_dim = config.hidden_size // config.num_attention_heads
self.scale = head_dim**-0.5
self.dropout = config.attention_dropout
self.qkv = nn.Linear(config.hidden_size, config.hidden_size * 3, bias=config.qkv_bias)
self.proj = nn.Linear(config.hidden_size, config.hidden_size)
self.use_rel_pos = config.use_rel_pos
if self.use_rel_pos:
if input_size is None:
raise ValueError("Input size must be provided if using relative positional encoding.")
# initialize relative positional embeddings
self.rel_pos_h = nn.Parameter(torch.zeros(2 * input_size[0] - 1, head_dim))
self.rel_pos_w = nn.Parameter(torch.zeros(2 * input_size[1] - 1, head_dim))
def get_rel_pos(self, q_size: int, k_size: int, rel_pos: torch.Tensor) -> torch.Tensor:
"""
Get relative positional embeddings according to the relative positions of
query and key sizes.
Args:
q_size (int):
size of the query.
k_size (int):
size of key k.
rel_pos (`torch.Tensor`):
relative position embeddings (L, channel).
Returns:
Extracted positional embeddings according to relative positions.
"""
max_rel_dist = int(2 * max(q_size, k_size) - 1)
# Interpolate rel pos.
rel_pos_resized = F.interpolate(
rel_pos.reshape(1, rel_pos.shape[0], -1).permute(0, 2, 1),
size=max_rel_dist,
mode="linear",
)
rel_pos_resized = rel_pos_resized.reshape(-1, max_rel_dist).permute(1, 0)
# Scale the coords with short length if shapes for q and k are different.
q_coords = torch.arange(q_size)[:, None] * max(k_size / q_size, 1.0)
k_coords = torch.arange(k_size)[None, :] * max(q_size / k_size, 1.0)
relative_coords = (q_coords - k_coords) + (k_size - 1) * max(q_size / k_size, 1.0)
return rel_pos_resized[relative_coords.long()]
def add_decomposed_rel_pos(
self,
attn: torch.Tensor,
query: torch.Tensor,
rel_pos_h: torch.Tensor,
rel_pos_w: torch.Tensor,
q_size: Tuple[int, int],
k_size: Tuple[int, int],
) -> torch.Tensor:
"""
Calculate decomposed Relative Positional Embeddings from :paper:`mvitv2`.
https://github.com/facebookresearch/mvit/blob/19786631e330df9f3622e5402b4a419a263a2c80/mvit/models/attention.py
Args:
attn (`torch.Tensor`):
attention map.
query (`torch.Tensor`):
query q in the attention layer with shape (batch_size, query_height * query_width, channel).
rel_pos_h (`torch.Tensor`):
relative position embeddings (Lh, channel) for height axis.
rel_pos_w (`torch.Tensor`):
relative position embeddings (Lw, channel) for width axis.
q_size (tuple):
spatial sequence size of query q with (query_height, query_width).
k_size (tuple):
spatial sequence size of key k with (key_height, key_width).
Returns:
attn (`torch.Tensor`):
attention map with added relative positional embeddings.
"""
query_height, query_width = q_size
key_height, key_width = k_size
relative_position_height = self.get_rel_pos(query_height, key_height, rel_pos_h)
relative_position_width = self.get_rel_pos(query_width, key_width, rel_pos_w)
batch_size, _, dim = query.shape
reshaped_query = query.reshape(batch_size, query_height, query_width, dim)
rel_h = torch.einsum("bhwc,hkc->bhwk", reshaped_query, relative_position_height)
rel_w = torch.einsum("bhwc,wkc->bhwk", reshaped_query, relative_position_width)
attn = attn.reshape(batch_size, query_height, query_width, key_height, key_width)
attn = attn + rel_h[:, :, :, :, None] + rel_w[:, :, :, None, :]
attn = attn.reshape(batch_size, query_height * query_width, key_height * key_width)
return attn
def forward(self, hidden_states: torch.Tensor, output_attentions=False) -> torch.Tensor:
batch_size, height, width, _ = hidden_states.shape
# qkv with shape (3, batch_size, nHead, height * width, channel)
qkv = (
self.qkv(hidden_states)
.reshape(batch_size, height * width, 3, self.num_attention_heads, -1)
.permute(2, 0, 3, 1, 4)
)
# q, k, v with shape (batch_size * nHead, height * width, channel)
query, key, value = qkv.reshape(3, batch_size * self.num_attention_heads, height * width, -1).unbind(0)
attn_weights = (query * self.scale) @ key.transpose(-2, -1)
if self.use_rel_pos:
attn_weights = self.add_decomposed_rel_pos(
attn_weights, query, self.rel_pos_h, self.rel_pos_w, (height, width), (height, width)
)
attn_weights = torch.nn.functional.softmax(attn_weights, dtype=torch.float32, dim=-1).to(query.dtype)
attn_probs = nn.functional.dropout(attn_weights, p=self.dropout, training=self.training)
attn_output = (attn_probs @ value).reshape(batch_size, self.num_attention_heads, height, width, -1)
attn_output = attn_output.permute(0, 2, 3, 1, 4).reshape(batch_size, height, width, -1)
attn_output = self.proj(attn_output)
if output_attentions:
outputs = (attn_output, attn_weights)
else:
outputs = (attn_output, None)
return outputs
class SamVisionLayer(nn.Module):
def __init__(self, config, window_size):
super().__init__()
self.layer_norm1 = nn.LayerNorm(config.hidden_size, eps=config.layer_norm_eps)
self.attn = SamVisionAttention(config, window_size)
self.layer_norm2 = nn.LayerNorm(config.hidden_size, eps=config.layer_norm_eps)
self.mlp = SamMLPBlock(config)
self.window_size = window_size
def window_partition(self, hidden_states: torch.Tensor, window_size: int) -> Tuple[torch.Tensor, Tuple[int, int]]:
"""
Args:
Partition into non-overlapping windows with padding if needed.
hidden_states (tensor): input tokens with [batch_size, height, width, channel]. window_size (int): window
size.
Returns:
windows: windows after partition with [batch_size * num_windows, window_size, window_size, channel].
(pad_height, pad_width): padded height and width before partition
"""
batch_size, height, width, channel = hidden_states.shape
pad_h = (window_size - height % window_size) % window_size
pad_w = (window_size - width % window_size) % window_size
hidden_states = F.pad(hidden_states, (0, 0, 0, pad_w, 0, pad_h))
pad_height, pad_width = height + pad_h, width + pad_w
hidden_states = hidden_states.reshape(
batch_size, pad_height // window_size, window_size, pad_width // window_size, window_size, channel
)
windows = hidden_states.permute(0, 1, 3, 2, 4, 5).contiguous().reshape(-1, window_size, window_size, channel)
return windows, (pad_height, pad_width)
def window_unpartition(
self, windows: torch.Tensor, window_size: int, padding_shape: Tuple[int, int], original_shape: Tuple[int, int]
) -> torch.Tensor:
"""
Args:
Window unpartition into original sequences and removing padding.
hidden_states (tensor):
input tokens with [batch_size * num_windows, window_size, window_size, channel].
window_size (int):
window size.
padding_shape (Tuple):
padded height and width (pad_height, pad_width).
original_shape (Tuple): original height and width (height, width) before padding.
Returns:
hidden_states: unpartitioned sequences with [batch_size, height, width, channel].
"""
pad_height, pad_width = padding_shape
height, width = original_shape
batch_size = windows.shape[0] // (pad_height * pad_width // window_size // window_size)
hidden_states = windows.reshape(
batch_size, pad_height // window_size, pad_width // window_size, window_size, window_size, -1
)
hidden_states = (
hidden_states.permute(0, 1, 3, 2, 4, 5).contiguous().reshape(batch_size, pad_height, pad_width, -1)
)
hidden_states = hidden_states[:, :height, :width, :].contiguous()
return hidden_states
def forward(
self,
hidden_states: torch.Tensor,
output_attentions: Optional[bool] = False,
) -> Tuple[torch.FloatTensor]:
residual = hidden_states
hidden_states = self.layer_norm1(hidden_states)
# Window partition
if self.window_size > 0:
height, width = hidden_states.shape[1], hidden_states.shape[2]
hidden_states, padding_shape = self.window_partition(hidden_states, self.window_size)
hidden_states, attn_weights = self.attn(
hidden_states=hidden_states,
output_attentions=output_attentions,
)
# Reverse window partition
if self.window_size > 0:
hidden_states = self.window_unpartition(hidden_states, self.window_size, padding_shape, (height, width))
hidden_states = residual + hidden_states
layernorm_output = self.layer_norm2(hidden_states)
hidden_states = hidden_states + self.mlp(layernorm_output)
outputs = (hidden_states,)
if output_attentions:
outputs += (attn_weights,)
return outputs
class SamVisionNeck(nn.Module):
def __init__(self, config: SamVisionConfig):
super().__init__()
self.config = config
self.conv1 = nn.Conv2d(config.hidden_size, config.output_channels, kernel_size=1, bias=False)
self.layer_norm1 = SamLayerNorm(config.output_channels, data_format="channels_first")
self.conv2 = nn.Conv2d(config.output_channels, config.output_channels, kernel_size=3, padding=1, bias=False)
self.layer_norm2 = SamLayerNorm(config.output_channels, data_format="channels_first")
def forward(self, hidden_states):
hidden_states = hidden_states.permute(0, 3, 1, 2)
hidden_states = self.conv1(hidden_states)
hidden_states = self.layer_norm1(hidden_states)
hidden_states = self.conv2(hidden_states)
hidden_states = self.layer_norm2(hidden_states)
return hidden_states
class SamVisionEncoder(nn.Module):
def __init__(self, config: SamVisionConfig):
super().__init__()
self.config = config
self.image_size = config.image_size
self.patch_embed = SamPatchEmbeddings(config)
self.pos_embed = None
if config.use_abs_pos:
# Initialize absolute positional embedding with pretrain image size.
self.pos_embed = nn.Parameter(
torch.zeros(
1,
config.image_size // config.patch_size,
config.image_size // config.patch_size,
config.hidden_size,
)
)
self.layers = nn.ModuleList()
for i in range(config.num_hidden_layers):
layer = SamVisionLayer(
config,
window_size=config.window_size if i not in config.global_attn_indexes else 0,
)
self.layers.append(layer)
self.neck = SamVisionNeck(config)
self.gradient_checkpointing = False
def get_input_embeddings(self):
return self.patch_embed
def forward(
self,
pixel_values: Optional[torch.FloatTensor] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[Tuple, SamVisionEncoderOutput]:
output_attentions = output_attentions if output_attentions is not None else self.config.output_attentions
output_hidden_states = (
output_hidden_states if output_hidden_states is not None else self.config.output_hidden_states
)
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
if pixel_values is None:
raise ValueError("You have to specify pixel_values")
hidden_states = self.patch_embed(pixel_values)
if self.pos_embed is not None:
hidden_states = hidden_states + self.pos_embed
all_hidden_states = () if output_hidden_states else None
all_self_attentions = () if output_attentions else None
for i, layer_module in enumerate(self.layers):
if output_hidden_states:
all_hidden_states = all_hidden_states + (hidden_states,)
if self.gradient_checkpointing and self.training:
def create_custom_forward(module):
def custom_forward(*inputs):
return module(*inputs, output_attentions)
return custom_forward
layer_outputs = torch.utils.checkpoint.checkpoint(
create_custom_forward(layer_module),
hidden_states,
)
else:
layer_outputs = layer_module(hidden_states, output_attentions=output_attentions)
hidden_states = layer_outputs[0]
if output_attentions:
all_self_attentions = all_self_attentions + (layer_outputs[1],)
if output_hidden_states:
all_hidden_states = all_hidden_states + (hidden_states,)
hidden_states = self.neck(hidden_states)
if not return_dict:
outputs = (hidden_states,)
if output_hidden_states:
outputs = outputs + (all_hidden_states,)
if output_attentions:
outputs = outputs + (all_self_attentions,)
return outputs
return SamVisionEncoderOutput(
last_hidden_state=hidden_states,
hidden_states=all_hidden_states,
attentions=all_self_attentions,
)
class SamPreTrainedModel(PreTrainedModel):
config_class = SamConfig
base_model_prefix = "sam"
main_input_name = "pixel_values"
def _init_weights(self, module):
std = self.config.initializer_range
if isinstance(module, (nn.Linear, nn.Conv2d, nn.ConvTranspose2d)):
module.weight.data.normal_(mean=0.0, std=std)
if module.bias is not None:
module.bias.data.zero_()
elif isinstance(module, nn.Embedding):
module.weight.data.normal_(mean=0.0, std=std)
if module.padding_idx is not None:
module.weight.data[module.padding_idx].zero_()
SAM_START_DOCSTRING = r"""
This model inherits from [`PreTrainedModel`]. Check the superclass documentation for the generic methods the
library implements for all its model (such as downloading or saving, resizing the input embeddings, pruning heads
etc.)
This model is also a PyTorch [torch.nn.Module](https://pytorch.org/docs/stable/nn.html#torch.nn.Module) subclass.
Use it as a regular PyTorch Module and refer to the PyTorch documentation for all matter related to general usage
and behavior.
Parameters:
config ([`SamConfig`]): Model configuration class with all the parameters of the model.
Initializing with a config file does not load the weights associated with the model, only the
configuration. Check out the [`~PreTrainedModel.from_pretrained`] method to load the model weights.
"""
SAM_INPUTS_DOCSTRING = r"""
Args:
pixel_values (`torch.FloatTensor` of shape `(batch_size, num_channels, height, width)`):
Pixel values. Pixel values can be obtained using [`SamProcessor`]. See [`SamProcessor.__call__`] for
details.
input_points (`torch.FloatTensor` of shape `(batch_size, num_points, 2)`):
Input 2D spatial points, this is used by the prompt encoder to encode the prompt. Generally yields to much
better results. The points can be obtained by passing a list of list of list to the processor that will
create corresponding `torch` tensors of dimension 4. The first dimension is the image batch size, the
second dimension is the point batch size (i.e. how many segmentation masks do we want the model to predict
per input point), the third dimension is the number of points per segmentation mask (it is possible to pass
multiple points for a single mask), and the last dimension is the x (vertical) and y (horizontal)
coordinates of the point. If a different number of points is passed either for each image, or for each
mask, the processor will create "PAD" points that will correspond to the (0, 0) coordinate, and the
computation of the embedding will be skipped for these points using the labels.
input_labels (`torch.LongTensor` of shape `(batch_size, point_batch_size, num_points)`):
Input labels for the points, this is used by the prompt encoder to encode the prompt. According to the
official implementation, there are 3 types of labels
- `1`: the point is a point that contains the object of interest
- `0`: the point is a point that does not contain the object of interest
- `-1`: the point corresponds to the background
We added the label:
- `-10`: the point is a padding point, thus should be ignored by the prompt encoder
The padding labels should be automatically done by the processor.
input_boxes (`torch.FloatTensor` of shape `(batch_size, num_boxes, 4)`):
Input boxes for the points, this is used by the prompt encoder to encode the prompt. Generally yields to
much better generated masks. The boxes can be obtained by passing a list of list of list to the processor,
that will generate a `torch` tensor, with each dimension corresponding respectively to the image batch
size, the number of boxes per image and the coordinates of the top left and botton right point of the box.
In the order (`x1`, `y1`, `x2`, `y2`):
- `x1`: the x coordinate of the top left point of the input box
- `y1`: the y coordinate of the top left point of the input box
- `x2`: the x coordinate of the bottom right point of the input box
- `y2`: the y coordinate of the bottom right point of the input box
input_masks (`torch.FloatTensor` of shape `(batch_size, image_size, image_size)`):
SAM model also accepts segmentation masks as input. The mask will be embedded by the prompt encoder to
generate a corresponding embedding, that will be fed later on to the mask decoder. These masks needs to be
manually fed by the user, and they need to be of shape (`batch_size`, `image_size`, `image_size`).
image_embeddings (`torch.FloatTensor` of shape `(batch_size, output_channels, window_size, window_size)`):
Image embeddings, this is used by the mask decder to generate masks and iou scores. For more memory
efficient computation, users can first retrieve the image embeddings using the `get_image_embeddings`
method, and then feed them to the `forward` method instead of feeding the `pixel_values`.
multimask_output (`bool`, *optional*):
In the original implementation and paper, the model always outputs 3 masks per image (or per point / per
bounding box if relevant). However, it is possible to just output a single mask, that corresponds to the
"best" mask, by specifying `multimask_output=False`.
attention_similarity (`torch.FloatTensor`, *optional*):
Attention similarity tensor, to be provided to the mask decoder for target-guided attention in case the
model is used for personalization as introduced in [PerSAM](https://arxiv.org/abs/2305.03048).
target_embedding (`torch.FloatTensor`, *optional*):
Embedding of the target concept, to be provided to the mask decoder for target-semantic prompting in case
the model is used for personalization as introduced in [PerSAM](https://arxiv.org/abs/2305.03048).
output_attentions (`bool`, *optional*):
Whether or not to return the attentions tensors of all attention layers. See `attentions` under returned
tensors for more detail.
output_hidden_states (`bool`, *optional*):
Whether or not to return the hidden states of all layers. See `hidden_states` under returned tensors for
more detail.
return_dict (`bool`, *optional*):
Whether or not to return a [`~utils.ModelOutput`] instead of a plain tuple.
"""
@add_start_docstrings(
"Segment Anything Model (SAM) for generating segmentation masks, given an input image and ",
" optional 2D location and bounding boxes.",
SAM_START_DOCSTRING,
)
class SamModel(SamPreTrainedModel):
_tied_weights_keys = ["prompt_encoder.shared_embedding.positional_embedding"]
def __init__(self, config):
super().__init__(config)
self.shared_image_embedding = SamPositionalEmbedding(config.vision_config)
self.vision_encoder = SamVisionEncoder(config.vision_config)
self.prompt_encoder = SamPromptEncoder(config.prompt_encoder_config, self.shared_image_embedding)
self.mask_decoder = SamMaskDecoder(config.mask_decoder_config)
self.post_init()
def get_input_embeddings(self):
return self.vision_encoder.get_input_embeddings()
def get_image_wide_positional_embeddings(self):
size = self.config.prompt_encoder_config.image_embedding_size
target_device = self.shared_image_embedding.positional_embedding.device
target_dtype = self.shared_image_embedding.positional_embedding.dtype
grid = torch.ones((size, size), device=target_device, dtype=target_dtype)
y_embed = grid.cumsum(dim=0) - 0.5
x_embed = grid.cumsum(dim=1) - 0.5
y_embed = y_embed / size
x_embed = x_embed / size
positional_embedding = self.shared_image_embedding(torch.stack([x_embed, y_embed], dim=-1))
return positional_embedding.permute(2, 0, 1).unsqueeze(0) # channel x height x width
@torch.no_grad()
def get_image_embeddings(
self,
pixel_values,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
):
r"""
Returns the image embeddings by passing the pixel values through the vision encoder.
Args:
pixel_values (`torch.FloatTensor` of shape `(batch_size, num_channels, height, width)`):
Input pixel values
output_attentions (`bool`, *optional*):
Whether or not to return the attentions tensors of all attention layers.
output_hidden_states (`bool`, *optional*):
Whether or not to return the hidden states of all layers.
return_dict (`bool`, *optional*):
Whether or not to return a [`~utils.ModelOutput`] instead of a plain tuple.
"""
vision_output = self.vision_encoder(
pixel_values,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
image_embeddings = vision_output[0]
return image_embeddings
@torch.no_grad()
def get_prompt_embeddings(
self,
input_points: Optional[torch.FloatTensor] = None,
input_labels: Optional[torch.LongTensor] = None,
input_boxes: Optional[torch.FloatTensor] = None,
input_masks: Optional[torch.LongTensor] = None,
):
r"""
Returns the prompt embeddings by passing the input points, labels, boxes and masks through the prompt encoder.
Args:
input_points (`torch.FloatTensor` of shape `(batch_size, point_batch_size, num_points_per_image, 2)`):
Optional input points for the prompt encoder. The padding of the point is automatically done by the
processor. `point_batch_size` refers to the number of masks that we want the model to predict per
point. The model will output `point_batch_size` times 3 masks in total.
input_labels (`torch.LongTensor` of shape `(batch_size, point_batch_size, num_points_per_image)`):
Optional input labels for the prompt encoder. The padding of the labels is automatically done by the
processor, or can be fed by the user.
input_boxes (`torch.FloatTensor` of shape `(batch_size, num_boxes_per_image, 4)`):
Optional input boxes for the prompt encoder. The padding of the boxes is automatically done by the
processor. users can also pass manually the input boxes.
input_masks (`torch.LongTensor` of shape `(batch_size, image_size, image_size)`):
Optional input masks for the prompt encoder.
"""
prompt_output = self.prompt_encoder(
input_points=input_points,
input_labels=input_labels,
input_boxes=input_boxes,
input_masks=input_masks,
)
return prompt_output
@add_start_docstrings_to_model_forward(SAM_INPUTS_DOCSTRING)
def forward(
self,
pixel_values: Optional[torch.FloatTensor] = None,
input_points: Optional[torch.FloatTensor] = None,
input_labels: Optional[torch.LongTensor] = None,
input_boxes: Optional[torch.FloatTensor] = None,
input_masks: Optional[torch.LongTensor] = None,
image_embeddings: Optional[torch.FloatTensor] = None,
multimask_output: bool = True,
attention_similarity: Optional[torch.FloatTensor] = None,
target_embedding: Optional[torch.FloatTensor] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict=None,
**kwargs,
) -> List[Dict[str, torch.Tensor]]:
r"""
Example:
```python
>>> from PIL import Image
>>> import requests
>>> from transformers import AutoModel, AutoProcessor
>>> model = AutoModel.from_pretrained("facebook/sam-vit-base")
>>> processor = AutoProcessor.from_pretrained("facebook/sam-vit-base")
>>> img_url = "https://huggingface.co/datasets/huggingface/documentation-images/resolve/main/transformers/model_doc/sam-car.png"
>>> raw_image = Image.open(requests.get(img_url, stream=True).raw).convert("RGB")
>>> input_points = [[[400, 650]]] # 2D location of a window on the car
>>> inputs = processor(images=raw_image, input_points=input_points, return_tensors="pt")
>>> # Get segmentation mask
>>> outputs = model(**inputs)
>>> # Postprocess masks
>>> masks = processor.post_process_masks(
... outputs.pred_masks, inputs["original_sizes"], inputs["reshaped_input_sizes"]
... )
```
"""
output_attentions = output_attentions if output_attentions is not None else self.config.output_attentions
output_hidden_states = (
output_hidden_states if output_hidden_states is not None else self.config.output_hidden_states
)
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
if pixel_values is None and image_embeddings is None:
raise ValueError("Either pixel_values or image_embeddings must be provided.")
if pixel_values is not None and image_embeddings is not None:
raise ValueError("Only one of pixel_values and image_embeddings can be provided.")
if input_points is not None and len(input_points.shape) != 4:
raise ValueError(
"The input_points must be a 4D tensor. Of shape `batch_size`, `point_batch_size`, `nb_points_per_image`, `2`.",
" got {}.".format(input_points.shape),
)
if input_boxes is not None and len(input_boxes.shape) != 3:
raise ValueError(
"The input_points must be a 3D tensor. Of shape `batch_size`, `nb_boxes`, `4`.",
" got {}.".format(input_boxes.shape),
)
if input_points is not None and input_boxes is not None:
point_batch_size = input_points.shape[1]
box_batch_size = input_boxes.shape[1]
if point_batch_size != box_batch_size:
raise ValueError(
"You should provide as many bounding boxes as input points per box. Got {} and {}.".format(
point_batch_size, box_batch_size
)
)
image_positional_embeddings = self.get_image_wide_positional_embeddings()
# repeat with batch size
batch_size = pixel_values.shape[0] if pixel_values is not None else image_embeddings.shape[0]
image_positional_embeddings = image_positional_embeddings.repeat(batch_size, 1, 1, 1)
vision_attentions = None
vision_hidden_states = None
if pixel_values is not None:
vision_outputs = self.vision_encoder(
pixel_values,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
image_embeddings = vision_outputs[0]
if output_hidden_states:
vision_hidden_states = vision_outputs[1]
if output_attentions:
vision_attentions = vision_outputs[-1]
if input_points is not None and input_labels is None:
input_labels = torch.ones_like(input_points[:, :, :, 0], dtype=torch.int, device=input_points.device)
if input_points is not None and image_embeddings.shape[0] != input_points.shape[0]:
raise ValueError(
"The batch size of the image embeddings and the input points must be the same. ",
"Got {} and {} respectively.".format(image_embeddings.shape[0], input_points.shape[0]),
" if you want to pass multiple points for the same image, make sure that you passed ",
" input_points of shape (batch_size, point_batch_size, num_points_per_image, 3) and ",
" input_labels of shape (batch_size, point_batch_size, num_points_per_image)",
)
sparse_embeddings, dense_embeddings = self.prompt_encoder(
input_points=input_points,
input_labels=input_labels,
input_boxes=input_boxes,
input_masks=input_masks,
)
low_res_masks, iou_predictions, mask_decoder_attentions = self.mask_decoder(
image_embeddings=image_embeddings,
image_positional_embeddings=image_positional_embeddings,
sparse_prompt_embeddings=sparse_embeddings,
dense_prompt_embeddings=dense_embeddings,
multimask_output=multimask_output,
attention_similarity=attention_similarity,
target_embedding=target_embedding,
output_attentions=output_attentions,
)
if not return_dict:
output = (iou_predictions, low_res_masks)
if output_hidden_states:
output = output + (vision_hidden_states,)
if output_attentions:
output = output + (vision_attentions, mask_decoder_attentions)
return output
return SamImageSegmentationOutput(
iou_scores=iou_predictions,
pred_masks=low_res_masks,
vision_hidden_states=vision_hidden_states,
vision_attentions=vision_attentions,
mask_decoder_attentions=mask_decoder_attentions,
)
| 65,035 | 44.575333 | 167 | py |
transformers | transformers-main/src/transformers/models/sam/convert_sam_original_to_hf_format.py | # coding=utf-8
# Copyright 2023 The HuggingFace Inc. team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
"""
Convert SAM checkpoints from the original repository.
"""
import argparse
import re
import numpy as np
import requests
import torch
from huggingface_hub import hf_hub_download
from PIL import Image
from transformers import (
SamConfig,
SamImageProcessor,
SamModel,
SamProcessor,
SamVisionConfig,
)
KEYS_TO_MODIFY_MAPPING = {
"iou_prediction_head.layers.0": "iou_prediction_head.proj_in",
"iou_prediction_head.layers.1": "iou_prediction_head.layers.0",
"iou_prediction_head.layers.2": "iou_prediction_head.proj_out",
"mask_decoder.output_upscaling.0": "mask_decoder.upscale_conv1",
"mask_decoder.output_upscaling.1": "mask_decoder.upscale_layer_norm",
"mask_decoder.output_upscaling.3": "mask_decoder.upscale_conv2",
"mask_downscaling.0": "mask_embed.conv1",
"mask_downscaling.1": "mask_embed.layer_norm1",
"mask_downscaling.3": "mask_embed.conv2",
"mask_downscaling.4": "mask_embed.layer_norm2",
"mask_downscaling.6": "mask_embed.conv3",
"point_embeddings": "point_embed",
"pe_layer.positional_encoding_gaussian_matrix": "shared_embedding.positional_embedding",
"image_encoder": "vision_encoder",
"neck.0": "neck.conv1",
"neck.1": "neck.layer_norm1",
"neck.2": "neck.conv2",
"neck.3": "neck.layer_norm2",
"patch_embed.proj": "patch_embed.projection",
".norm": ".layer_norm",
"blocks": "layers",
}
def replace_keys(state_dict):
model_state_dict = {}
state_dict.pop("pixel_mean", None)
state_dict.pop("pixel_std", None)
output_hypernetworks_mlps_pattern = r".*.output_hypernetworks_mlps.(\d+).layers.(\d+).*"
for key, value in state_dict.items():
for key_to_modify, new_key in KEYS_TO_MODIFY_MAPPING.items():
if key_to_modify in key:
key = key.replace(key_to_modify, new_key)
if re.match(output_hypernetworks_mlps_pattern, key):
layer_nb = int(re.match(output_hypernetworks_mlps_pattern, key).group(2))
if layer_nb == 0:
key = key.replace("layers.0", "proj_in")
elif layer_nb == 1:
key = key.replace("layers.1", "layers.0")
elif layer_nb == 2:
key = key.replace("layers.2", "proj_out")
model_state_dict[key] = value
model_state_dict["shared_image_embedding.positional_embedding"] = model_state_dict[
"prompt_encoder.shared_embedding.positional_embedding"
]
return model_state_dict
def convert_sam_checkpoint(model_name, pytorch_dump_folder, push_to_hub, model_hub_id="ybelkada/segment-anything"):
checkpoint_path = hf_hub_download(model_hub_id, f"checkpoints/{model_name}.pth")
if "sam_vit_b" in model_name:
config = SamConfig()
elif "sam_vit_l" in model_name:
vision_config = SamVisionConfig(
hidden_size=1024,
num_hidden_layers=24,
num_attention_heads=16,
global_attn_indexes=[5, 11, 17, 23],
)
config = SamConfig(
vision_config=vision_config,
)
elif "sam_vit_h" in model_name:
vision_config = SamVisionConfig(
hidden_size=1280,
num_hidden_layers=32,
num_attention_heads=16,
global_attn_indexes=[7, 15, 23, 31],
)
config = SamConfig(
vision_config=vision_config,
)
state_dict = torch.load(checkpoint_path, map_location="cpu")
state_dict = replace_keys(state_dict)
image_processor = SamImageProcessor()
processor = SamProcessor(image_processor=image_processor)
hf_model = SamModel(config)
hf_model.load_state_dict(state_dict)
hf_model = hf_model.to("cuda")
img_url = "https://huggingface.co/ybelkada/segment-anything/resolve/main/assets/car.png"
raw_image = Image.open(requests.get(img_url, stream=True).raw).convert("RGB")
input_points = [[[400, 650]]]
input_labels = [[1]]
inputs = processor(images=np.array(raw_image), return_tensors="pt").to("cuda")
with torch.no_grad():
output = hf_model(**inputs)
scores = output.iou_scores.squeeze()
if model_name == "sam_vit_h_4b8939":
assert scores[-1].item() == 0.579890251159668
inputs = processor(
images=np.array(raw_image), input_points=input_points, input_labels=input_labels, return_tensors="pt"
).to("cuda")
with torch.no_grad():
output = hf_model(**inputs)
scores = output.iou_scores.squeeze()
assert scores[-1].item() == 0.9712603092193604
input_boxes = ((75, 275, 1725, 850),)
inputs = processor(images=np.array(raw_image), input_boxes=input_boxes, return_tensors="pt").to("cuda")
with torch.no_grad():
output = hf_model(**inputs)
scores = output.iou_scores.squeeze()
assert scores[-1].item() == 0.8686015605926514
# Test with 2 points and 1 image.
input_points = [[[400, 650], [800, 650]]]
input_labels = [[1, 1]]
inputs = processor(
images=np.array(raw_image), input_points=input_points, input_labels=input_labels, return_tensors="pt"
).to("cuda")
with torch.no_grad():
output = hf_model(**inputs)
scores = output.iou_scores.squeeze()
assert scores[-1].item() == 0.9936047792434692
if __name__ == "__main__":
parser = argparse.ArgumentParser()
choices = ["sam_vit_b_01ec64", "sam_vit_h_4b8939", "sam_vit_l_0b3195"]
parser.add_argument(
"--model_name",
default="sam_vit_h_4b8939",
choices=choices,
type=str,
help="Path to hf config.json of model to convert",
)
parser.add_argument("--pytorch_dump_folder_path", default=None, type=str, help="Path to the output PyTorch model.")
parser.add_argument(
"--push_to_hub",
action="store_true",
help="Whether to push the model and processor to the hub after converting",
)
parser.add_argument(
"--model_hub_id",
default="ybelkada/segment-anything",
choices=choices,
type=str,
help="Path to hf config.json of model to convert",
)
args = parser.parse_args()
convert_sam_checkpoint(args.model_name, args.pytorch_dump_folder_path, args.push_to_hub, args.model_hub_id)
| 6,958 | 32.618357 | 119 | py |
transformers | transformers-main/src/transformers/models/sam/modeling_tf_sam.py | # coding=utf-8
# Copyright 2023 The Meta AI Authors and The HuggingFace Team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
"""
TensorFlow SAM model. This file was mostly generated by auto-translation from the PyTorch original. In the event of a
discrepancy, the original file should be regarded as the 'reference' version.
"""
from __future__ import annotations
import collections
from dataclasses import dataclass
from typing import Dict, List, Optional, Tuple, Union
import numpy as np
import tensorflow as tf
from ...activations_tf import ACT2FN
from ...modeling_tf_outputs import TFBaseModelOutput
from ...modeling_tf_utils import TFModelInputType, TFPreTrainedModel, shape_list, unpack_inputs
from ...tf_utils import flatten, functional_layernorm
from ...utils import ModelOutput, add_start_docstrings, add_start_docstrings_to_model_forward, logging
from .configuration_sam import SamConfig, SamMaskDecoderConfig, SamPromptEncoderConfig, SamVisionConfig
logger = logging.get_logger(__name__)
_CONFIG_FOR_DOC = "SamConfig"
_CHECKPOINT_FOR_DOC = "facebook/sam-vit-huge"
TF_SAM_PRETRAINED_MODEL_ARCHIVE_LIST = [
"facebook/sam-vit-huge",
"facebook/sam-vit-large",
"facebook/sam-vit-base",
# See all SAM models at https://huggingface.co/models?filter=sam
]
@dataclass
class TFSamVisionEncoderOutput(ModelOutput):
"""
Base class for sam vision model's outputs that also contains image embeddings obtained by applying the projection
layer to the pooler_output.
Args:
image_embeds (`tf.Tensor` of shape `(batch_size, output_dim)` *optional* returned when model is initialized with `with_projection=True`):
The image embeddings obtained by applying the projection layer to the pooler_output.
last_hidden_state (`tf.Tensor` of shape `(batch_size, sequence_length, hidden_size)`):
Sequence of hidden-states at the output of the last layer of the model.
hidden_states (`tuple(tf.Tensor)`, *optional*, returned when `output_hidden_states=True` is passed or when `config.output_hidden_states=True`):
Tuple of `tf.Tensor` (one for the output of the embeddings, if the model has an embedding layer, + one for
the output of each layer) of shape `(batch_size, sequence_length, hidden_size)`.
Hidden-states of the model at the output of each layer plus the optional initial embedding outputs.
attentions (`tuple(tf.Tensor)`, *optional*, returned when `output_attentions=True` is passed or when `config.output_attentions=True`):
Tuple of `tf.Tensor` (one for each layer) of shape `(batch_size, num_heads, sequence_length,
sequence_length)`.
Attentions weights after the attention softmax, used to compute the weighted average in the self-attention
heads.
"""
image_embeds: tf.Tensor | None = None
last_hidden_state: tf.Tensor = None
hidden_states: Tuple[tf.Tensor] | None = None
attentions: Tuple[tf.Tensor] | None = None
@dataclass
class TFSamImageSegmentationOutput(ModelOutput):
"""
Base class for Segment-Anything model's output
Args:
iou_scores (`tf.Tensor` of shape `(batch_size, num_masks)`):
The iou scores of the predicted masks.
pred_masks (`tf.Tensor` of shape `(batch_size, num_masks, height, width)`):
The predicted low resolutions masks. Needs to be post-processed by the processor
vision_hidden_states (`tuple(tf.Tensor)`, *optional*, returned when `output_hidden_states=True` is passed or when `config.output_hidden_states=True`):
Tuple of `tf.Tensor` (one for the output of the embeddings, if the model has an embedding layer, + one for
the output of each layer) of shape `(batch_size, sequence_length, hidden_size)`.
Hidden-states of the vision model at the output of each layer plus the optional initial embedding outputs.
vision_attentions (`tuple(tf.Tensor)`, *optional*, returned when `output_attentions=True` is passed or when `config.output_attentions=True`):
Tuple of `tf.Tensor` (one for each layer) of shape `(batch_size, num_heads, sequence_length,
sequence_length)`.
Attentions weights after the attention softmax, used to compute the weighted average in the self-attention
heads.
mask_decoder_attentions (`tuple(tf.Tensor)`, *optional*, returned when `output_attentions=True` is passed or when `config.output_attentions=True`):
Tuple of `tf.Tensor` (one for each layer) of shape `(batch_size, num_heads, sequence_length,
sequence_length)`.
Attentions weights after the attention softmax, used to compute the weighted average in the self-attention
heads.
"""
iou_scores: tf.Tensor = None
pred_masks: tf.Tensor = None
vision_hidden_states: Tuple[tf.Tensor] | None = None
vision_attentions: Tuple[tf.Tensor] | None = None
mask_decoder_attentions: Tuple[tf.Tensor] | None = None
class TFSamPatchEmbeddings(tf.keras.layers.Layer):
"""
This class turns `pixel_values` of shape `(batch_size, num_channels, height, width)` into the initial
`hidden_states` (patch embeddings) of shape `(batch_size, seq_length, hidden_size)` to be consumed by a
Transformer.
"""
def __init__(self, config, **kwargs):
super().__init__(**kwargs)
image_size, patch_size = config.image_size, config.patch_size
num_channels, hidden_size = config.num_channels, config.hidden_size
image_size = image_size if isinstance(image_size, collections.abc.Iterable) else (image_size, image_size)
patch_size = patch_size if isinstance(patch_size, collections.abc.Iterable) else (patch_size, patch_size)
num_patches = (image_size[1] // patch_size[1]) * (image_size[0] // patch_size[0])
self.image_size = image_size
self.patch_size = patch_size
self.num_channels = num_channels
self.num_patches = num_patches
self.projection = tf.keras.layers.Conv2D(
hidden_size, kernel_size=patch_size, strides=patch_size, name="projection"
)
def call(self, pixel_values):
batch_size, num_channels, height, width = shape_list(pixel_values)
if num_channels != self.num_channels:
raise ValueError(
"Make sure that the channel dimension of the pixel values match with the one set in the configuration."
)
if height != self.image_size[0] or width != self.image_size[1]:
raise ValueError(
f"Input image size ({height}*{width}) doesn't match model ({self.image_size[0]}*{self.image_size[1]})."
)
embeddings = self.projection(tf.transpose(pixel_values, perm=[0, 2, 3, 1]))
return embeddings
class TFSamMLPBlock(tf.keras.layers.Layer):
def __init__(self, config, **kwargs):
super().__init__(**kwargs)
self.lin1 = tf.keras.layers.Dense(config.mlp_dim, name="lin1")
self.lin2 = tf.keras.layers.Dense(config.hidden_size, name="lin2")
self.act = ACT2FN[config.hidden_act]
def call(self, hidden_states: tf.Tensor) -> tf.Tensor:
hidden_states = self.lin1(hidden_states)
hidden_states = self.act(hidden_states)
hidden_states = self.lin2(hidden_states)
return hidden_states
class TFSamLayerNorm(tf.keras.layers.Layer):
r"""LayerNorm that supports two data formats: channels_last (default) or channels_first.
The ordering of the dimensions in the inputs. channels_last corresponds to inputs with shape (batch_size, height,
width, channels) while channels_first corresponds to inputs with shape (batch_size, channels, height, width).
"""
def __init__(self, normalized_shape, eps=1e-6, data_format="channels_last", **kwargs):
super().__init__(**kwargs)
self.eps = eps
self.data_format = data_format
self.normalized_shape = normalized_shape
if self.data_format not in ["channels_last", "channels_first"]:
raise NotImplementedError(f"Unsupported data format: {self.data_format}")
def build(self, input_shape):
self.weight = self.add_weight(shape=self.normalized_shape, initializer="ones", name="weight")
self.bias = self.add_weight(shape=self.normalized_shape, initializer="zeros", name="bias")
super().build(input_shape)
def call(self, x: tf.Tensor) -> tf.Tensor:
if self.data_format == "channels_last":
x = functional_layernorm(x, weight=self.weight, bias=self.bias, epsilon=self.eps, axis=-1)
elif self.data_format == "channels_first":
x = functional_layernorm(x, weight=self.weight, bias=self.bias, epsilon=self.eps, axis=1)
return x
class TFSamAttention(tf.keras.layers.Layer):
"""
SAM's attention layer that allows for downscaling the size of the embedding after projection to queries, keys, and
values.
"""
def __init__(self, config, downsample_rate=None, **kwargs):
super().__init__(**kwargs)
self.hidden_size = config.hidden_size
downsample_rate = config.attention_downsample_rate if downsample_rate is None else downsample_rate
self.internal_dim = config.hidden_size // downsample_rate
self.num_attention_heads = config.num_attention_heads
if self.internal_dim % config.num_attention_heads != 0:
raise ValueError("num_attention_heads must divide hidden_size.")
self.q_proj = tf.keras.layers.Dense(self.internal_dim, name="q_proj")
self.k_proj = tf.keras.layers.Dense(self.internal_dim, name="k_proj")
self.v_proj = tf.keras.layers.Dense(self.internal_dim, name="v_proj")
self.out_proj = tf.keras.layers.Dense(self.hidden_size, name="out_proj")
def _separate_heads(self, hidden_states: tf.Tensor, num_attention_heads: int) -> tf.Tensor:
batch, point_batch_size, n_tokens, channel = shape_list(hidden_states)
c_per_head = channel // num_attention_heads
hidden_states = tf.reshape(
hidden_states, (batch * point_batch_size, n_tokens, num_attention_heads, c_per_head)
)
return tf.transpose(hidden_states, perm=[0, 2, 1, 3])
def _recombine_heads(self, hidden_states: tf.Tensor, point_batch_size: int) -> tf.Tensor:
batch, n_heads, n_tokens, c_per_head = shape_list(hidden_states)
hidden_states = tf.transpose(hidden_states, perm=[0, 2, 1, 3])
return tf.reshape(
hidden_states,
(batch // tf.reduce_max([1, point_batch_size]), point_batch_size, n_tokens, n_heads * c_per_head),
)
def call(self, query: tf.Tensor, key: tf.Tensor, value: tf.Tensor) -> tf.Tensor:
# Input projections
query = self.q_proj(query)
key = self.k_proj(key)
value = self.v_proj(value)
point_batch_size = shape_list(query)[1]
# Separate into heads
query = self._separate_heads(query, self.num_attention_heads)
key = self._separate_heads(key, self.num_attention_heads)
value = self._separate_heads(value, self.num_attention_heads)
# SamAttention
_, _, _, c_per_head = shape_list(query)
attn = tf.matmul(
query, tf.transpose(key, perm=[0, 1, 3, 2])
) # batch_size * point_batch_size x N_heads x N_tokens x N_tokens
attn = attn / tf.math.sqrt(float(c_per_head))
attn = tf.nn.softmax(attn, axis=-1)
# Get output
out = tf.matmul(attn, value)
out = self._recombine_heads(out, point_batch_size)
out = self.out_proj(out)
return out
class TFSamTwoWayAttentionBlock(tf.keras.layers.Layer):
def __init__(self, config, attention_downsample_rate: int = 2, skip_first_layer_pe: bool = False, **kwargs):
"""
A transformer block with four layers:
(1) self-attention of sparse inputs (2) cross attention of sparse inputs -> dense inputs (3) mlp block on
sparse inputs (4) cross attention of dense inputs -> sparse inputs
Arguments:
config (`SamMaskDecoderConfig`):
The configuration file used to instantiate the block
attention_downsample_rate (*optionalk*, int, defaults to 2):
The downsample ratio of the block used to reduce the inner dim of the attention.
skip_first_layer_pe (*optional*, bool, defaults to `False`):
Whether or not to skip the addition of the query_point_embedding on the first layer.
"""
super().__init__(**kwargs)
self.hidden_size = config.hidden_size
self.layer_norm_eps = config.layer_norm_eps
self.self_attn = TFSamAttention(config, downsample_rate=1, name="self_attn")
self.layer_norm1 = tf.keras.layers.LayerNormalization(epsilon=self.layer_norm_eps, name="layer_norm1")
self.cross_attn_token_to_image = TFSamAttention(
config, downsample_rate=attention_downsample_rate, name="cross_attn_token_to_image"
)
self.layer_norm2 = tf.keras.layers.LayerNormalization(epsilon=self.layer_norm_eps, name="layer_norm2")
self.mlp = TFSamMLPBlock(config, name="mlp")
self.layer_norm3 = tf.keras.layers.LayerNormalization(epsilon=self.layer_norm_eps, name="layer_norm3")
self.layer_norm4 = tf.keras.layers.LayerNormalization(epsilon=self.layer_norm_eps, name="layer_norm4")
self.cross_attn_image_to_token = TFSamAttention(
config, downsample_rate=attention_downsample_rate, name="cross_attn_image_to_token"
)
self.skip_first_layer_pe = skip_first_layer_pe
def call(
self,
queries: tf.Tensor,
keys: tf.Tensor,
query_point_embedding: tf.Tensor,
key_point_embedding: tf.Tensor,
output_attentions: bool = False,
):
# Self attention block
if self.skip_first_layer_pe:
queries = self.self_attn(query=queries, key=queries, value=queries)
else:
query = queries + query_point_embedding
attn_out = self.self_attn(query=query, key=query, value=queries)
queries = queries + attn_out
queries = self.layer_norm1(queries)
# Cross attention block, tokens attending to image embedding
query = queries + query_point_embedding
key = keys + key_point_embedding
attn_out = self.cross_attn_token_to_image(query=query, key=key, value=keys)
queries = queries + attn_out
queries = self.layer_norm2(queries)
# MLP block
mlp_out = self.mlp(queries)
queries = queries + mlp_out
queries = self.layer_norm3(queries)
# Cross attention block, image embedding attending to tokens
query = queries + query_point_embedding
key = keys + key_point_embedding
attn_out = self.cross_attn_image_to_token(query=key, key=query, value=queries)
keys = keys + attn_out
keys = self.layer_norm4(keys)
outputs = (queries, keys)
if output_attentions:
outputs = outputs + (attn_out,)
else:
outputs = outputs + (None,)
return outputs
class TFSamTwoWayTransformer(tf.keras.layers.Layer):
def __init__(self, config: SamMaskDecoderConfig, **kwargs):
super().__init__(**kwargs)
self.config = config
self.num_hidden_layers = config.num_hidden_layers
self.layers = []
for i in range(self.num_hidden_layers):
self.layers.append(TFSamTwoWayAttentionBlock(config, skip_first_layer_pe=(i == 0), name=f"layers_._{i}"))
self.final_attn_token_to_image = TFSamAttention(config, name="final_attn_token_to_image")
self.layer_norm_final_attn = tf.keras.layers.LayerNormalization(
epsilon=config.layer_norm_eps, name="layer_norm_final_attn"
)
def call(
self,
point_embeddings: tf.Tensor,
image_embeddings: tf.Tensor,
image_positional_embeddings: tf.Tensor,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[Tuple, TFBaseModelOutput]:
output_attentions = output_attentions if output_attentions is not None else self.config.output_attentions
output_hidden_states = (
output_hidden_states if output_hidden_states is not None else self.config.output_hidden_states
)
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
all_attentions = ()
if image_embeddings is None:
raise ValueError("You have to specify an image_embedding")
image_embeddings = tf.transpose(flatten(image_embeddings, 2), perm=(0, 2, 1))[:, None]
image_positional_embeddings = tf.transpose(flatten(image_positional_embeddings, 2), (0, 2, 1))[:, None]
# Prepare queries
queries = point_embeddings
keys = image_embeddings
# Apply transformer blocks and final layernorm
for layer in self.layers:
queries, keys, attention_outputs = layer(
queries=queries,
keys=keys,
query_point_embedding=point_embeddings,
key_point_embedding=image_positional_embeddings,
output_attentions=output_attentions,
)
if output_attentions:
all_attentions = all_attentions + (attention_outputs,)
# Apply the final attenion layer from the points to the image
query = queries + point_embeddings
key = keys + image_positional_embeddings
attn_out = self.final_attn_token_to_image(query=query, key=key, value=keys)
queries = queries + attn_out
queries = self.layer_norm_final_attn(queries)
return queries, keys, all_attentions
class TFSamFeedForward(tf.keras.layers.Layer):
def __init__(
self, input_dim: int, hidden_dim: int, output_dim: int, num_layers: int, sigmoid_output: bool = False, **kwargs
):
super().__init__(**kwargs)
self.num_layers = num_layers
self.activation = tf.keras.layers.ReLU()
self.proj_in = tf.keras.layers.Dense(hidden_dim, input_shape=(input_dim,), name="proj_in")
self.proj_out = tf.keras.layers.Dense(output_dim, input_shape=(hidden_dim,), name="proj_out")
self.layers = [
tf.keras.layers.Dense(hidden_dim, input_shape=(hidden_dim,), name=f"layers_._{i}")
for i in range(num_layers - 2)
]
self.sigmoid_output = sigmoid_output
def call(self, hidden_states):
hidden_states = self.proj_in(hidden_states)
hidden_states = self.activation(hidden_states)
for layer in self.layers:
hidden_states = self.activation(layer(hidden_states))
hidden_states = self.proj_out(hidden_states)
if self.sigmoid_output:
hidden_states = tf.sigmoid(hidden_states)
return hidden_states
class TFSamMaskDecoder(tf.keras.layers.Layer):
def __init__(self, config: SamMaskDecoderConfig, **kwargs):
super().__init__(**kwargs)
self.hidden_size = config.hidden_size
self.num_multimask_outputs = config.num_multimask_outputs
self.num_mask_tokens = config.num_multimask_outputs + 1
self.transformer = TFSamTwoWayTransformer(config, name="transformer")
self.upscale_conv1 = tf.keras.layers.Conv2DTranspose(
self.hidden_size // 4, kernel_size=2, strides=2, name="upscale_conv1", data_format="channels_first"
)
self.upscale_conv2 = tf.keras.layers.Conv2DTranspose(
self.hidden_size // 8, kernel_size=2, strides=2, name="upscale_conv2", data_format="channels_first"
)
self.upscale_layer_norm = TFSamLayerNorm(
self.hidden_size // 4, data_format="channels_first", name="upscale_layer_norm"
)
self.activation = tf.nn.gelu
mlps_list = []
for i in range(self.num_mask_tokens):
mlps_list += [
TFSamFeedForward(
self.hidden_size,
self.hidden_size,
self.hidden_size // 8,
3,
name=f"output_hypernetworks_mlps_._{i}",
)
]
self.output_hypernetworks_mlps = mlps_list
self.iou_prediction_head = TFSamFeedForward(
self.hidden_size,
config.iou_head_hidden_dim,
self.num_mask_tokens,
config.iou_head_depth,
name="iou_prediction_head",
)
def build(self, input_shape):
self.iou_token = self.add_weight(shape=(1, self.hidden_size), name="iou_token.weight", trainable=True)
self.mask_tokens = self.add_weight(
shape=(self.num_mask_tokens, self.hidden_size), name="mask_tokens.weight", trainable=True
)
super().build(input_shape)
def call(
self,
image_embeddings: tf.Tensor,
image_positional_embeddings: tf.Tensor,
sparse_prompt_embeddings: tf.Tensor,
dense_prompt_embeddings: tf.Tensor,
multimask_output: bool,
output_attentions: Optional[bool] = None,
) -> Tuple[tf.Tensor, tf.Tensor]:
batch_size, num_channels, height, width = shape_list(image_embeddings)
point_batch_size = tf.math.maximum(1, tf.shape(sparse_prompt_embeddings)[1])
output_tokens = tf.concat([self.iou_token, self.mask_tokens], axis=0) # Should be (1, 32) + (4, 32) = (5, 32)
output_tokens = tf.tile(
output_tokens[None, None, :], [batch_size, point_batch_size, 1, 1]
) # Should be (batch_size, point_size, 5, 32)
# Matt: The original Torch code checked that the sum of sparse_prompt_embeddings equalled 0. However, this only
# happens when the sparse prompt embeddings are an empty tensor with shape[1] == 0. I replaced
# it with an explicit shape check to avoid data-dependent control flow which breaks XLA.
if shape_list(sparse_prompt_embeddings)[1] != 0:
tokens = tf.concat((output_tokens, sparse_prompt_embeddings), axis=2)
else:
tokens = output_tokens
point_embeddings = tf.cast(tokens, self.iou_token.dtype)
image_embeddings = image_embeddings + dense_prompt_embeddings
image_embeddings = tf.tile(image_embeddings, [point_batch_size, 1, 1, 1])
image_positional_embeddings = tf.tile(image_positional_embeddings, [point_batch_size, 1, 1, 1])
point_embedding, image_embeddings, attentions = self.transformer(
point_embeddings=point_embeddings,
image_embeddings=image_embeddings,
image_positional_embeddings=image_positional_embeddings,
output_attentions=output_attentions,
)
iou_token_out = point_embedding[:, :, 0, :]
mask_tokens_out = point_embedding[:, :, 1 : (1 + self.num_mask_tokens), :]
image_embeddings = tf.transpose(image_embeddings, perm=(0, 1, 3, 2))
image_embeddings = tf.reshape(image_embeddings, [batch_size * point_batch_size, num_channels, height, width])
upscaled_embedding = self.upscale_conv1(image_embeddings)
upscaled_embedding = self.activation(self.upscale_layer_norm(upscaled_embedding))
upscaled_embedding = self.activation(self.upscale_conv2(upscaled_embedding))
hyper_in_list = []
for i in range(self.num_mask_tokens):
current_mlp = self.output_hypernetworks_mlps[i]
hyper_in_list += [current_mlp(mask_tokens_out[:, :, i, :])]
hyper_in = tf.stack(hyper_in_list, axis=2)
_, num_channels, height, width = shape_list(upscaled_embedding)
upscaled_embedding = tf.reshape(
upscaled_embedding, [batch_size, point_batch_size, num_channels, height * width]
)
masks = tf.reshape(hyper_in @ upscaled_embedding, [batch_size, point_batch_size, -1, height, width])
iou_pred = self.iou_prediction_head(iou_token_out)
if multimask_output:
mask_slice = slice(1, None)
else:
mask_slice = slice(0, 1)
masks = masks[:, :, mask_slice, :, :]
iou_pred = iou_pred[:, :, mask_slice]
outputs = (masks, iou_pred)
if output_attentions:
outputs = outputs + (attentions,)
else:
outputs = outputs + (None,)
return outputs
class TFSamPositionalEmbedding(tf.keras.layers.Layer):
def __init__(self, config, **kwargs):
super().__init__(**kwargs)
self.scale = config.hidden_size // 2
self.config = config
def build(self, input_shape):
# TODO Matt: What is going on here? Why is a non-trainable weight randomly initialized?
self.positional_embedding = self.add_weight(
name="positional_embedding",
shape=(2, self.config.num_pos_feats),
initializer=tf.keras.initializers.RandomNormal(mean=0.0, stddev=self.scale),
trainable=False,
)
super().build(input_shape)
def call(self, input_coords, input_shape=None):
"""Positionally encode points that are normalized to [0,1]."""
coordinates = tf.identity(input_coords)
if input_shape is not None:
coordinates = tf.stack(
[
tf.cast(coordinates[:, :, :, 0], tf.float32) / input_shape[1],
tf.cast(coordinates[:, :, :, 1], tf.float32) / input_shape[0],
],
axis=-1,
)
# assuming coords are in [0, 1]^2 square and have d_1 x ... x d_n x 2 shape
coordinates = 2 * coordinates - 1
coordinates = tf.cast(coordinates, self.positional_embedding.dtype)
coordinates = tf.matmul(coordinates, self.positional_embedding)
coordinates = 2 * np.pi * coordinates
# outputs d_1 x ... x d_n x channel shape
return tf.concat([tf.sin(coordinates), tf.cos(coordinates)], axis=-1)
class TFSamMaskEmbedding(tf.keras.layers.Layer):
def __init__(self, config: SamPromptEncoderConfig, **kwargs):
super().__init__(**kwargs)
self.mask_input_channels = config.mask_input_channels // 4
self.activation = ACT2FN[config.hidden_act]
self.conv1 = tf.keras.layers.Conv2D(self.mask_input_channels, kernel_size=2, strides=2, name="conv1")
self.conv2 = tf.keras.layers.Conv2D(config.mask_input_channels, kernel_size=2, strides=2, name="conv2")
self.conv3 = tf.keras.layers.Conv2D(config.hidden_size, kernel_size=1, name="conv3")
self.layer_norm1 = TFSamLayerNorm(self.mask_input_channels, config.layer_norm_eps, name="layer_norm1")
self.layer_norm2 = TFSamLayerNorm(self.mask_input_channels * 4, config.layer_norm_eps, name="layer_norm2")
def call(self, masks):
masks = tf.transpose(masks, perm=(0, 2, 3, 1)) # Convert to channels-last
hidden_states = self.conv1(masks)
hidden_states = self.layer_norm1(hidden_states)
hidden_states = self.activation(hidden_states)
hidden_states = self.conv2(hidden_states)
hidden_states = self.layer_norm2(hidden_states)
hidden_states = self.activation(hidden_states)
dense_embeddings = self.conv3(hidden_states)
dense_embeddings = tf.transpose(dense_embeddings, perm=(0, 3, 1, 2)) # Convert back to channels-first
return dense_embeddings
def build(self, input_shape):
# This class needs an explicit build method because it isn't called with the standard dummy inputs
conv1_shape = [None, None, None, 1]
conv2_shape = [None, None, None, self.mask_input_channels]
conv3_shape = [None, None, None, self.mask_input_channels * 4]
layer_norm1_shape = [None, None, None, self.mask_input_channels]
layer_norm2_shape = [None, None, None, self.mask_input_channels * 4]
with tf.name_scope("conv1"):
self.conv1.build(conv1_shape)
with tf.name_scope("conv2"):
self.conv2.build(conv2_shape)
with tf.name_scope("conv3"):
self.conv3.build(conv3_shape)
with tf.name_scope("layer_norm1"):
self.layer_norm1.build(layer_norm1_shape)
with tf.name_scope("layer_norm2"):
self.layer_norm2.build(layer_norm2_shape)
super().build(input_shape)
class TFSamPromptEncoder(tf.keras.layers.Layer):
def __init__(self, config: SamPromptEncoderConfig, shared_patch_embedding, **kwargs):
super().__init__(**kwargs)
self.shared_embedding = shared_patch_embedding
self.mask_embed = TFSamMaskEmbedding(config, name="mask_embed")
self.no_mask_embed = None
self.image_embedding_size = (config.image_embedding_size, config.image_embedding_size)
self.input_image_size = config.image_size
self.point_embed = []
self.hidden_size = config.hidden_size
self.not_a_point_embed = None
self.config = config
def build(self, input_shape):
self.no_mask_embed = self.add_weight(
name="no_mask_embed.weight",
shape=(1, self.hidden_size),
initializer=tf.keras.initializers.RandomNormal(mean=0.0, stddev=0.02),
trainable=True,
)
self.point_embed = [
self.add_weight(
name=f"point_embed_._{i}.weight",
shape=(1, self.hidden_size),
initializer=tf.keras.initializers.RandomNormal(mean=0.0, stddev=0.02),
trainable=True,
)
for i in range(self.config.num_point_embeddings)
]
self.not_a_point_embed = self.add_weight(
name="not_a_point_embed.weight",
shape=(1, self.hidden_size),
initializer=tf.keras.initializers.RandomNormal(mean=0.0, stddev=0.02),
trainable=True,
)
with tf.name_scope("mask_embed"):
# We must explicitly build the mask embed because it isn't touched by the standard dummy inputs
self.mask_embed.build(
(None, self.config.mask_input_channels, self.config.image_size, self.config.image_size)
)
super().build(input_shape)
def _embed_points(self, points: tf.Tensor, labels: tf.Tensor, pad: bool) -> tf.Tensor:
"""Embeds point prompts."""
points = points + 0.5 # Shift to center of pixel
if pad:
target_point_shape = (shape_list(points)[0], shape_list(points)[1], 1, shape_list(points)[-1])
target_labels_shape = (shape_list(points)[0], shape_list(points)[1], 1)
padding_point = tf.zeros(target_point_shape, dtype=points.dtype)
padding_label = -tf.ones(target_labels_shape, dtype=labels.dtype)
points = tf.concat([points, padding_point], axis=2)
labels = tf.concat([labels, padding_label], axis=2)
input_shape = (self.input_image_size, self.input_image_size)
point_embedding = self.shared_embedding(points, input_shape)
point_embedding = tf.where(labels[..., None] == -1, self.not_a_point_embed[0], point_embedding)
point_embedding = tf.where(
labels[..., None] != -10,
point_embedding,
tf.zeros_like(point_embedding),
)
point_embedding = tf.where(
(labels == 0)[:, :, :, None], point_embedding + self.point_embed[0], point_embedding
)
point_embedding = tf.where(
(labels == 1)[:, :, :, None], point_embedding + self.point_embed[1], point_embedding
)
return point_embedding
def _embed_boxes(self, boxes: tf.Tensor) -> tf.Tensor:
"""Embeds box prompts."""
boxes = boxes + 0.5 # Shift to center of pixel
batch_size, nb_boxes = shape_list(boxes)[:2]
coords = tf.reshape(boxes, (batch_size, nb_boxes, 2, 2))
input_shape = (self.input_image_size, self.input_image_size)
corner_embedding = self.shared_embedding(coords, input_shape)
corner_embedding += tf.where(
tf.range(shape_list(corner_embedding)[2])[None, None, :, None] == 0,
self.point_embed[2][0],
self.point_embed[3][0],
)
return corner_embedding
def call(
self,
batch_size: Optional[int],
input_points: Optional[Tuple[tf.Tensor, tf.Tensor]],
input_labels: tf.Tensor | None,
input_boxes: tf.Tensor | None,
input_masks: tf.Tensor | None,
) -> Tuple[tf.Tensor, tf.Tensor]:
"""
Embeds different types of prompts, returning both sparse and dense embeddings.
Args:
points (`tf.Tensor`, *optional*):
point coordinates and labels to embed.
boxes (`tf.Tensor`, *optional*):
boxes to embed
masks (`tf.Tensor`, *optional*):
masks to embed
"""
sparse_embeddings = None
if input_points is not None:
batch_size, point_batch_size = shape_list(input_points)[:2]
if input_labels is None:
raise ValueError("If points are provided, labels must also be provided.")
point_embeddings = self._embed_points(input_points, input_labels, pad=(input_boxes is None))
sparse_embeddings = tf.zeros(
(batch_size, point_batch_size, 0, self.hidden_size), dtype=point_embeddings.dtype
)
sparse_embeddings = tf.concat([sparse_embeddings, point_embeddings], axis=2)
if input_boxes is not None:
batch_size = shape_list(input_boxes)[0]
box_embeddings = self._embed_boxes(input_boxes)
if sparse_embeddings is None:
sparse_embeddings = box_embeddings
else:
sparse_embeddings = tf.concat([sparse_embeddings, box_embeddings], axis=2)
if input_masks is not None:
dense_embeddings = self.mask_embed(input_masks)
else:
dense_embeddings = self.no_mask_embed[0]
dense_embeddings = tf.reshape(dense_embeddings, (1, -1, 1, 1))
dense_embeddings = tf.tile(
dense_embeddings, (batch_size, 1, self.image_embedding_size[0], self.image_embedding_size[1])
)
if sparse_embeddings is None:
sparse_embeddings = tf.zeros((batch_size, 0, 1, self.hidden_size), dtype=dense_embeddings.dtype)
return sparse_embeddings, dense_embeddings
class TFSamVisionAttention(tf.keras.layers.Layer):
"""Multi-head Attention block with relative position embeddings."""
def __init__(self, config, window_size, **kwargs):
super().__init__(**kwargs)
input_size = (
(config.image_size // config.patch_size, config.image_size // config.patch_size)
if window_size == 0
else (window_size, window_size)
)
self.input_size = input_size
self.num_attention_heads = config.num_attention_heads
head_dim = config.hidden_size // config.num_attention_heads
self.head_dim = head_dim
self.scale = head_dim**-0.5
self.dropout = config.attention_dropout
self.qkv = tf.keras.layers.Dense(config.hidden_size * 3, use_bias=config.qkv_bias, name="qkv")
self.proj = tf.keras.layers.Dense(config.hidden_size, name="proj")
self.use_rel_pos = config.use_rel_pos
if self.use_rel_pos:
if input_size is None:
raise ValueError("Input size must be provided if using relative positional encoding.")
self.config = config
def build(self, input_shape):
if self.input_size is not None:
# initialize relative positional embeddings
self.rel_pos_h = self.add_weight(
shape=(2 * self.input_size[0] - 1, self.head_dim), initializer="zeros", name="rel_pos_h"
)
self.rel_pos_w = self.add_weight(
shape=(2 * self.input_size[1] - 1, self.head_dim), initializer="zeros", name="rel_pos_w"
)
super().build(input_shape)
def get_rel_pos(self, q_size: int, k_size: int, rel_pos: tf.Tensor) -> tf.Tensor:
"""
Get relative positional embeddings according to the relative positions of
query and key sizes.
Args:
q_size (int):
size of the query.
k_size (int):
size of key k.
rel_pos (`tf.Tensor`):
relative position embeddings (L, channel).
Returns:
Extracted positional embeddings according to relative positions.
"""
max_rel_dist = int(2 * max(q_size, k_size) - 1)
# Interpolate rel pos if needed.
if rel_pos.shape[0] != max_rel_dist:
# Interpolate rel pos.
rel_pos_resized = tf.image.resize(
tf.reshape(rel_pos, (1, rel_pos.shape[0], -1)),
size=(max_rel_dist, rel_pos.shape[1]),
method="bilinear",
)
rel_pos_resized = tf.reshape(rel_pos_resized, (-1, max_rel_dist))
else:
rel_pos_resized = rel_pos
# Scale the coords with short length if shapes for q and k are different.
q_coords = tf.expand_dims(tf.range(q_size, dtype=tf.float32), 1) * max(k_size / q_size, 1.0)
k_coords = tf.expand_dims(tf.range(k_size, dtype=tf.float32), 0) * max(q_size / k_size, 1.0)
relative_coords = (q_coords - k_coords) + (k_size - 1) * max(q_size / k_size, 1.0)
return tf.gather(rel_pos_resized, tf.cast(relative_coords, tf.int32))
def add_decomposed_rel_pos(
self,
attn: tf.Tensor,
query: tf.Tensor,
rel_pos_h: tf.Tensor,
rel_pos_w: tf.Tensor,
q_size: Tuple[int, int],
k_size: Tuple[int, int],
) -> tf.Tensor:
"""
Calculate decomposed Relative Positional Embeddings from :paper:`mvitv2`.
https://github.com/facebookresearch/mvit/blob/19786631e330df9f3622e5402b4a419a263a2c80/mvit/models/attention.py
Args:
attn (`tf.Tensor`):
attention map.
query (`tf.Tensor`):
query q in the attention layer with shape (batch_size, query_height * query_width, channel).
rel_pos_h (`tf.Tensor`):
relative position embeddings (Lh, channel) for height axis.
rel_pos_w (`tf.Tensor`):
relative position embeddings (Lw, channel) for width axis.
q_size (tuple):
spatial sequence size of query q with (query_height, query_width).
k_size (tuple):
spatial sequence size of key k with (key_height, key_width).
Returns:
attn (`tf.Tensor`):
attention map with added relative positional embeddings.
"""
query_height, query_width = q_size
key_height, key_width = k_size
relative_position_height = self.get_rel_pos(query_height, key_height, rel_pos_h)
relative_position_width = self.get_rel_pos(query_width, key_width, rel_pos_w)
batch_size, _, dim = shape_list(query)
reshaped_query = tf.reshape(query, (batch_size, query_height, query_width, dim))
rel_h = tf.einsum("bhwc,hkc->bhwk", reshaped_query, relative_position_height)
rel_w = tf.einsum("bhwc,wkc->bhwk", reshaped_query, relative_position_width)
attn = tf.reshape(attn, (batch_size, query_height, query_width, key_height, key_width))
attn = attn + tf.expand_dims(rel_h, axis=-1) + tf.expand_dims(rel_w, axis=-2)
attn = tf.reshape(attn, (batch_size, query_height * query_width, key_height * key_width))
return attn
def call(self, hidden_states: tf.Tensor, output_attentions=False, training=False) -> tf.Tensor:
batch_size, height, width, _ = shape_list(hidden_states)
# qkv with shape (3, batch_size, nHead, height * width, channel)
qkv = tf.reshape(self.qkv(hidden_states), (batch_size, height * width, 3, self.num_attention_heads, -1))
qkv = tf.transpose(qkv, perm=(2, 0, 3, 1, 4))
# q, k, v with shape (batch_size * nHead, height * width, channel)
query, key, value = tf.unstack(
tf.reshape(qkv, (3, batch_size * self.num_attention_heads, height * width, -1)), axis=0
)
attn_weights = tf.matmul(query * self.scale, key, transpose_b=True)
if self.use_rel_pos:
attn_weights = self.add_decomposed_rel_pos(
attn_weights, query, self.rel_pos_h, self.rel_pos_w, (height, width), (height, width)
)
attn_weights = tf.nn.softmax(attn_weights, axis=-1)
if training:
attn_probs = tf.nn.dropout(attn_weights, rate=self.dropout)
else:
attn_probs = attn_weights
attn_output = tf.reshape(attn_probs @ value, (batch_size, self.num_attention_heads, height, width, -1))
attn_output = tf.transpose(attn_output, perm=(0, 2, 3, 1, 4))
attn_output = tf.reshape(attn_output, (batch_size, height, width, self.config.hidden_size))
attn_output = self.proj(attn_output)
if output_attentions:
outputs = (attn_output, attn_weights)
else:
outputs = (attn_output, None)
return outputs
class TFSamVisionLayer(tf.keras.layers.Layer):
def __init__(self, config, window_size, **kwargs):
super().__init__(**kwargs)
self.layer_norm1 = tf.keras.layers.LayerNormalization(epsilon=config.layer_norm_eps, name="layer_norm1")
self.attn = TFSamVisionAttention(config, window_size, name="attn")
self.layer_norm2 = tf.keras.layers.LayerNormalization(epsilon=config.layer_norm_eps, name="layer_norm2")
self.mlp = TFSamMLPBlock(config, name="mlp")
self.window_size = window_size
def window_partition(self, hidden_states: tf.Tensor, window_size: int) -> Tuple[tf.Tensor, Tuple[int, int]]:
batch_size, height, width, channel = shape_list(hidden_states)
pad_h = (window_size - height % window_size) % window_size
pad_w = (window_size - width % window_size) % window_size
if pad_h > 0 or pad_w > 0:
hidden_states = tf.pad(hidden_states, [[0, 0], [0, pad_h], [0, pad_w], [0, 0]])
pad_height, pad_width = height + pad_h, width + pad_w
hidden_states = tf.reshape(
hidden_states,
[batch_size, pad_height // window_size, window_size, pad_width // window_size, window_size, channel],
)
windows = tf.reshape(
tf.transpose(hidden_states, perm=[0, 1, 3, 2, 4, 5]), [-1, window_size, window_size, channel]
)
return windows, (pad_height, pad_width)
def window_unpartition(
self, windows: tf.Tensor, window_size: int, padding_shape: Tuple[int, int], original_shape: Tuple[int, int]
) -> tf.Tensor:
pad_height, pad_width = padding_shape
height, width = original_shape
batch_size = shape_list(windows)[0] // (pad_height * pad_width // window_size // window_size)
hidden_states = tf.reshape(
windows, [batch_size, pad_height // window_size, pad_width // window_size, window_size, window_size, -1]
)
hidden_states = tf.reshape(
tf.transpose(hidden_states, perm=[0, 1, 3, 2, 4, 5]), [batch_size, pad_height, pad_width, -1]
)
if pad_height > height or pad_width > width:
hidden_states = hidden_states[:, :height, :width, :]
return hidden_states
def call(
self,
hidden_states: tf.Tensor,
output_attentions: Optional[bool] = False,
training: Optional[bool] = False,
) -> Tuple[tf.Tensor]:
residual = hidden_states
hidden_states = self.layer_norm1(hidden_states)
if self.window_size > 0:
height, width = hidden_states.shape[1], hidden_states.shape[2]
hidden_states, padding_shape = self.window_partition(hidden_states, self.window_size)
hidden_states, attn_weights = self.attn(
hidden_states=hidden_states,
output_attentions=output_attentions,
training=training,
)
if self.window_size > 0:
hidden_states = self.window_unpartition(hidden_states, self.window_size, padding_shape, (height, width))
hidden_states = residual + hidden_states
layernorm_output = self.layer_norm2(hidden_states)
hidden_states = hidden_states + self.mlp(layernorm_output)
outputs = (hidden_states,)
if output_attentions:
outputs += (attn_weights,)
return outputs
class TFSamVisionNeck(tf.keras.layers.Layer):
def __init__(self, config: SamVisionConfig, **kwargs):
super().__init__(**kwargs)
self.config = config
self.conv1 = tf.keras.layers.Conv2D(
config.output_channels,
kernel_size=1,
use_bias=False,
name="conv1",
)
self.layer_norm1 = TFSamLayerNorm(config.output_channels, name="layer_norm1")
self.conv2 = tf.keras.layers.Conv2D(
config.output_channels,
kernel_size=3,
padding="same",
use_bias=False,
name="conv2",
)
self.layer_norm2 = TFSamLayerNorm(config.output_channels, name="layer_norm2")
def call(self, hidden_states):
hidden_states = self.conv1(hidden_states)
hidden_states = self.layer_norm1(hidden_states)
hidden_states = self.conv2(hidden_states)
hidden_states = self.layer_norm2(hidden_states)
hidden_states = tf.transpose(hidden_states, perm=[0, 3, 1, 2])
return hidden_states
class TFSamVisionEncoder(tf.keras.layers.Layer):
def __init__(self, config: SamVisionConfig, **kwargs):
super().__init__(**kwargs)
self.config = config
self.image_size = config.image_size
self.patch_embed = TFSamPatchEmbeddings(config, name="patch_embed")
self.pos_embed = None
self.layers = []
for i in range(config.num_hidden_layers):
layer = TFSamVisionLayer(
config,
window_size=config.window_size if i not in config.global_attn_indexes else 0,
name=f"layers_._{i}",
)
self.layers.append(layer)
self.neck = TFSamVisionNeck(config, name="neck")
def build(self, input_shape):
if self.config.use_abs_pos:
# Initialize absolute positional embedding with pretrain image size.
self.pos_embed = self.add_weight(
shape=[
1,
self.config.image_size // self.config.patch_size,
self.config.image_size // self.config.patch_size,
self.config.hidden_size,
],
initializer="zeros",
trainable=True,
name="pos_embed",
)
super().build(input_shape)
def get_input_embeddings(self):
return self.patch_embed
def call(
self,
pixel_values: tf.Tensor | None = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
training: Optional[bool] = False,
) -> Union[Tuple, TFSamVisionEncoderOutput]:
output_attentions = output_attentions if output_attentions is not None else self.config.output_attentions
output_hidden_states = (
output_hidden_states if output_hidden_states is not None else self.config.output_hidden_states
)
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
if pixel_values is None:
raise ValueError("You have to specify pixel_values")
hidden_states = self.patch_embed(pixel_values)
if self.pos_embed is not None:
hidden_states = hidden_states + self.pos_embed
all_hidden_states = () if output_hidden_states else None
all_self_attentions = () if output_attentions else None
for i, layer_module in enumerate(self.layers):
if output_hidden_states:
all_hidden_states = all_hidden_states + (hidden_states,)
layer_outputs = layer_module(hidden_states, output_attentions=output_attentions, training=training)
hidden_states = layer_outputs[0]
if output_attentions:
all_self_attentions = all_self_attentions + (layer_outputs[1],)
if output_hidden_states:
all_hidden_states = all_hidden_states + (hidden_states,)
hidden_states = self.neck(hidden_states)
if not return_dict:
outputs = (hidden_states,)
if output_hidden_states:
outputs = outputs + (all_hidden_states,)
if output_attentions:
outputs = outputs + (all_self_attentions,)
return outputs
return TFSamVisionEncoderOutput(
last_hidden_state=hidden_states,
hidden_states=all_hidden_states,
attentions=all_self_attentions,
)
class TFSamPreTrainedModel(TFPreTrainedModel):
config_class = SamConfig
base_model_prefix = "sam"
main_input_name = "pixel_values"
SAM_START_DOCSTRING = r"""
This model inherits from [`TFPreTrainedModel`]. Check the superclass documentation for the generic methods the
library implements for all its model (such as downloading or saving, resizing the input embeddings, pruning heads
etc.)
This model is also a TensorFlow [tf.keras.Model](https://www.tensorflow.org/api_docs/python/tf/keras/Model)
subclass. Use it as a regular TensorFlow Model and refer to the TensorFlow documentation for all matter related to
general usage and behavior.
Parameters:
config ([`SamConfig`]): Model configuration class with all the parameters of the model.
Initializing with a config file does not load the weights associated with the model, only the
configuration. Check out the [`~TFPreTrainedModel.from_pretrained`] method to load the model weights.
"""
SAM_INPUTS_DOCSTRING = r"""
Args:
pixel_values (`tf.Tensor` of shape `(batch_size, num_channels, height, width)`):
Pixel values. Pixel values can be obtained using [`SamProcessor`]. See [`SamProcessor.__call__`] for
details.
input_points (`tf.Tensor` of shape `(batch_size, num_points, 2)`):
Input 2D spatial points, this is used by the prompt encoder to encode the prompt. Generally yields to much
better results. The points can be obtained by passing a list of list of list to the processor that will
create corresponding `tf` tensors of dimension 4. The first dimension is the image batch size, the second
dimension is the point batch size (i.e. how many segmentation masks do we want the model to predict per
input point), the third dimension is the number of points per segmentation mask (it is possible to pass
multiple points for a single mask), and the last dimension is the x (vertical) and y (horizontal)
coordinates of the point. If a different number of points is passed either for each image, or for each
mask, the processor will create "PAD" points that will correspond to the (0, 0) coordinate, and the
computation of the embedding will be skipped for these points using the labels.
input_labels (`tf.Tensor` of shape `(batch_size, point_batch_size, num_points)`):
Input labels for the points, this is used by the prompt encoder to encode the prompt. According to the
official implementation, there are 3 types of labels
- `1`: the point is a point that contains the object of interest
- `0`: the point is a point that does not contain the object of interest
- `-1`: the point corresponds to the background
We added the label:
- `-10`: the point is a padding point, thus should be ignored by the prompt encoder
The padding labels should be automatically done by the processor.
input_boxes (`tf.Tensor` of shape `(batch_size, num_boxes, 4)`):
Input boxes for the points, this is used by the prompt encoder to encode the prompt. Generally yields to
much better generated masks. The boxes can be obtained by passing a list of list of list to the processor,
that will generate a `tf` tensor, with each dimension corresponding respectively to the image batch size,
the number of boxes per image and the coordinates of the top left and botton right point of the box. In the
order (`x1`, `y1`, `x2`, `y2`):
- `x1`: the x coordinate of the top left point of the input box
- `y1`: the y coordinate of the top left point of the input box
- `x2`: the x coordinate of the bottom right point of the input box
- `y2`: the y coordinate of the bottom right point of the input box
input_masks (`tf.Tensor` of shape `(batch_size, image_size, image_size)`):
SAM model also accepts segmentation masks as input. The mask will be embedded by the prompt encoder to
generate a corresponding embedding, that will be fed later on to the mask decoder. These masks needs to be
manually fed by the user, and they need to be of shape (`batch_size`, `image_size`, `image_size`).
image_embeddings (`tf.Tensor` of shape `(batch_size, output_channels, window_size, window_size)`):
Image embeddings, this is used by the mask decder to generate masks and iou scores. For more memory
efficient computation, users can first retrieve the image embeddings using the `get_image_embeddings`
method, and then feed them to the `call` method instead of feeding the `pixel_values`.
multimask_output (`bool`, *optional*):
In the original implementation and paper, the model always outputs 3 masks per image (or per point / per
bounding box if relevant). However, it is possible to just output a single mask, that corresponds to the
"best" mask, by specifying `multimask_output=False`.
output_attentions (`bool`, *optional*):
Whether or not to return the attentions tensors of all attention layers. See `attentions` under returned
tensors for more detail.
output_hidden_states (`bool`, *optional*):
Whether or not to return the hidden states of all layers. See `hidden_states` under returned tensors for
more detail.
return_dict (`bool`, *optional*):
Whether or not to return a [`~utils.ModelOutput`] instead of a plain tuple.
"""
@add_start_docstrings(
"Segment Anything Model (SAM) for generating segmentation masks, given an input image and ",
" optional 2D location and bounding boxes.",
SAM_START_DOCSTRING,
)
class TFSamModel(TFSamPreTrainedModel):
_keys_to_ignore_on_load_missing = [r"prompt_encoder.shared_embedding.positional_embedding"]
def __init__(self, config, **kwargs):
super().__init__(config, **kwargs)
self.shared_image_embedding = TFSamPositionalEmbedding(config.vision_config, name="shared_image_embedding")
self.vision_encoder = TFSamVisionEncoder(config.vision_config, name="vision_encoder")
self.prompt_encoder = TFSamPromptEncoder(
config.prompt_encoder_config, self.shared_image_embedding, name="prompt_encoder"
)
self.mask_decoder = TFSamMaskDecoder(config.mask_decoder_config, name="mask_decoder")
self.config = config
def get_input_embeddings(self):
return self.vision_encoder.get_input_embeddings()
def get_image_wide_positional_embeddings(self):
size = self.config.prompt_encoder_config.image_embedding_size
grid = tf.ones((size, size))
y_embed = tf.math.cumsum(grid, axis=0) - 0.5
x_embed = tf.math.cumsum(grid, axis=1) - 0.5
y_embed = y_embed / size
x_embed = x_embed / size
positional_embedding = self.shared_image_embedding(tf.stack([x_embed, y_embed], axis=-1))
return tf.expand_dims(tf.transpose(positional_embedding, perm=[2, 0, 1]), axis=0) # channel x height x width
def get_image_embeddings(
self,
pixel_values,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
):
r"""
Returns the image embeddings by passing the pixel values through the vision encoder.
Args:
pixel_values (`tf.Tensor` of shape `(batch_size, num_channels, height, width)`):
Input pixel values
output_attentions (`bool`, *optional*):
Whether or not to return the attentions tensors of all attention layers.
output_hidden_states (`bool`, *optional*):
Whether or not to return the hidden states of all layers.
return_dict (`bool`, *optional*):
Whether or not to return a [`~utils.TFModelOutput`] instead of a plain tuple.
"""
vision_output = self.vision_encoder(
pixel_values,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
image_embeddings = vision_output[0]
return image_embeddings
def get_prompt_embeddings(
self,
input_points: tf.Tensor | None = None,
input_labels: tf.Tensor | None = None,
input_boxes: tf.Tensor | None = None,
input_masks: tf.Tensor | None = None,
):
r"""
Returns the prompt embeddings by passing the input points, labels, boxes and masks through the prompt encoder.
Args:
input_points (`tf.Tensor` of shape `(batch_size, point_batch_size, num_points_per_image, 2)`):
Optional input points for the prompt encoder. The padding of the point is automatically done by the
processor. `point_batch_size` refers to the number of masks that we want the model to predict per
point. The model will output `point_batch_size` times 3 masks in total.
input_labels (`tf.Tensor` of shape `(batch_size, point_batch_size, num_points_per_image)`):
Optional input labels for the prompt encoder. The padding of the labels is automatically done by the
processor, or can be fed by the user.
input_boxes (`tf.Tensor` of shape `(batch_size, num_boxes_per_image, 4)`):
Optional input boxes for the prompt encoder. The padding of the boxes is automatically done by the
processor. users can also pass manually the input boxes.
input_masks (`tf.Tensor` of shape `(batch_size, image_size, image_size)`):
Optional input masks for the prompt encoder.
"""
prompt_output = self.prompt_encoder(
input_points=input_points,
input_labels=input_labels,
input_boxes=input_boxes,
input_masks=input_masks,
)
return prompt_output
@unpack_inputs
@add_start_docstrings_to_model_forward(SAM_INPUTS_DOCSTRING)
def call(
self,
pixel_values: TFModelInputType | None = None,
input_points: tf.Tensor | None = None,
input_labels: tf.Tensor | None = None,
input_boxes: tf.Tensor | None = None,
input_masks: tf.Tensor | None = None,
image_embeddings: tf.Tensor | None = None,
multimask_output: bool = True,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict=None,
training=False,
**kwargs,
) -> List[Dict[str, tf.Tensor]]:
output_attentions = output_attentions if output_attentions is not None else self.config.output_attentions
output_hidden_states = (
output_hidden_states if output_hidden_states is not None else self.config.output_hidden_states
)
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
if pixel_values is None and image_embeddings is None:
raise ValueError("Either pixel_values or image_embeddings must be provided.")
if pixel_values is not None and image_embeddings is not None:
raise ValueError("Only one of pixel_values and image_embeddings can be provided.")
if input_points is not None and len(input_points.shape) != 4:
raise ValueError(
"The input_points must be a 4D tensor. Of shape `batch_size`, `point_batch_size`, `nb_points_per_image`, `2`.",
" got {}.".format(input_points.shape),
)
if input_boxes is not None and len(input_boxes.shape) != 3:
raise ValueError(
"The input_points must be a 3D tensor. Of shape `batch_size`, `nb_boxes`, `4`.",
" got {}.".format(input_boxes.shape),
)
if input_points is not None and input_boxes is not None:
point_batch_size = shape_list(input_points)[1]
box_batch_size = shape_list(input_boxes)[1]
if point_batch_size != box_batch_size:
raise ValueError(
"You should provide as many bounding boxes as input points per box. Got {} and {}.".format(
point_batch_size, box_batch_size
)
)
if pixel_values is not None:
# Ensures that later checks pass even with an all-None shape from the serving signature
pixel_values = tf.ensure_shape(
pixel_values,
[
None,
self.config.vision_config.num_channels,
self.config.vision_config.image_size,
self.config.vision_config.image_size,
],
)
image_positional_embeddings = self.get_image_wide_positional_embeddings()
# repeat with batch size
batch_size = shape_list(pixel_values)[0] if pixel_values is not None else shape_list(image_embeddings)[0]
image_positional_embeddings = tf.repeat(image_positional_embeddings, batch_size, axis=0)
vision_attentions = None
vision_hidden_states = None
if pixel_values is not None:
vision_outputs = self.vision_encoder(
pixel_values,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=True,
training=training,
)
image_embeddings = vision_outputs["last_hidden_state"]
if output_hidden_states:
vision_hidden_states = vision_outputs["hidden_states"]
if output_attentions:
vision_attentions = vision_outputs["attentions"]
if input_points is not None and input_labels is None:
input_labels = tf.ones_like(input_points[:, :, :, 0], dtype=tf.int32)
if input_points is not None and image_embeddings.shape[0] != input_points.shape[0]:
raise ValueError(
"The batch size of the image embeddings and the input points must be the same. ",
"Got {} and {} respectively.".format(image_embeddings.shape[0], input_points.shape[0]),
" if you want to pass multiple points for the same image, make sure that you passed ",
" input_points of shape (batch_size, point_batch_size, num_points_per_image, 3) and ",
" input_labels of shape (batch_size, point_batch_size, num_points_per_image)",
)
sparse_embeddings, dense_embeddings = self.prompt_encoder(
batch_size=shape_list(image_embeddings)[0],
input_points=input_points,
input_labels=input_labels,
input_boxes=input_boxes,
input_masks=input_masks,
)
low_res_masks, iou_predictions, mask_decoder_attentions = self.mask_decoder(
image_embeddings=image_embeddings,
image_positional_embeddings=image_positional_embeddings,
sparse_prompt_embeddings=sparse_embeddings,
dense_prompt_embeddings=dense_embeddings,
multimask_output=multimask_output,
output_attentions=output_attentions,
)
if not return_dict:
output = (iou_predictions, low_res_masks)
if output_hidden_states:
output = output + (vision_hidden_states,)
if output_attentions:
output = output + (vision_attentions, mask_decoder_attentions)
return output
return TFSamImageSegmentationOutput(
iou_scores=iou_predictions,
pred_masks=low_res_masks,
vision_hidden_states=vision_hidden_states,
vision_attentions=vision_attentions,
mask_decoder_attentions=mask_decoder_attentions,
)
def serving_output(self, output: TFSamImageSegmentationOutput) -> TFSamImageSegmentationOutput:
hs = tf.convert_to_tensor(output.vision_hidden_states) if self.config.output_hidden_states else None
attns = tf.convert_to_tensor(output.vision_attentions) if self.config.output_attentions else None
return TFSamImageSegmentationOutput(
iou_scores=output.iou_scores,
pred_masks=output.pred_masks,
vision_hidden_states=hs if self.config.output_hidden_states else None,
vision_attentions=attns if self.config.output_attentions else None,
mask_decoder_attentions=output.mask_decoder_attentions if self.config.output_attentions else None,
)
| 66,857 | 44.60573 | 159 | py |
transformers | transformers-main/src/transformers/models/sam/__init__.py | # Copyright 2023 The HuggingFace Team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
from typing import TYPE_CHECKING
from ...utils import (
OptionalDependencyNotAvailable,
_LazyModule,
is_tf_available,
is_torch_available,
is_vision_available,
)
_import_structure = {
"configuration_sam": [
"SAM_PRETRAINED_CONFIG_ARCHIVE_MAP",
"SamConfig",
"SamMaskDecoderConfig",
"SamPromptEncoderConfig",
"SamVisionConfig",
],
"processing_sam": ["SamProcessor"],
}
try:
if not is_torch_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
_import_structure["modeling_sam"] = [
"SAM_PRETRAINED_MODEL_ARCHIVE_LIST",
"SamModel",
"SamPreTrainedModel",
]
try:
if not is_tf_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
_import_structure["modeling_tf_sam"] = [
"TF_SAM_PRETRAINED_MODEL_ARCHIVE_LIST",
"TFSamModel",
"TFSamPreTrainedModel",
]
try:
if not is_vision_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
_import_structure["image_processing_sam"] = ["SamImageProcessor"]
if TYPE_CHECKING:
from .configuration_sam import (
SAM_PRETRAINED_CONFIG_ARCHIVE_MAP,
SamConfig,
SamMaskDecoderConfig,
SamPromptEncoderConfig,
SamVisionConfig,
)
from .processing_sam import SamProcessor
try:
if not is_torch_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
from .modeling_sam import SAM_PRETRAINED_MODEL_ARCHIVE_LIST, SamModel, SamPreTrainedModel
try:
if not is_tf_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
from .modeling_tf_sam import TF_SAM_PRETRAINED_MODEL_ARCHIVE_LIST, TFSamModel, TFSamPreTrainedModel
try:
if not is_vision_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
from .image_processing_sam import SamImageProcessor
else:
import sys
sys.modules[__name__] = _LazyModule(__name__, globals()["__file__"], _import_structure, module_spec=__spec__)
| 2,980 | 27.122642 | 113 | py |
transformers | transformers-main/src/transformers/models/conditional_detr/image_processing_conditional_detr.py | # coding=utf-8
# Copyright 2022 The HuggingFace Inc. team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
"""Image processor class for Conditional DETR."""
import io
import pathlib
from collections import defaultdict
from typing import Any, Callable, Dict, Iterable, List, Optional, Set, Tuple, Union
import numpy as np
from ...feature_extraction_utils import BatchFeature
from ...image_processing_utils import BaseImageProcessor, get_size_dict
from ...image_transforms import (
PaddingMode,
center_to_corners_format,
corners_to_center_format,
id_to_rgb,
normalize,
pad,
rescale,
resize,
rgb_to_id,
to_channel_dimension_format,
)
from ...image_utils import (
IMAGENET_DEFAULT_MEAN,
IMAGENET_DEFAULT_STD,
ChannelDimension,
ImageInput,
PILImageResampling,
get_image_size,
infer_channel_dimension_format,
make_list_of_images,
to_numpy_array,
valid_coco_detection_annotations,
valid_coco_panoptic_annotations,
valid_images,
)
from ...utils import (
ExplicitEnum,
TensorType,
is_flax_available,
is_jax_tensor,
is_scipy_available,
is_tf_available,
is_tf_tensor,
is_torch_available,
is_torch_tensor,
is_vision_available,
logging,
)
if is_torch_available():
import torch
from torch import nn
if is_vision_available():
import PIL
if is_scipy_available():
import scipy.special
import scipy.stats
logger = logging.get_logger(__name__) # pylint: disable=invalid-name
AnnotationType = Dict[str, Union[int, str, List[Dict]]]
class AnnotionFormat(ExplicitEnum):
COCO_DETECTION = "coco_detection"
COCO_PANOPTIC = "coco_panoptic"
SUPPORTED_ANNOTATION_FORMATS = (AnnotionFormat.COCO_DETECTION, AnnotionFormat.COCO_PANOPTIC)
# Copied from transformers.models.detr.image_processing_detr.get_size_with_aspect_ratio
def get_size_with_aspect_ratio(image_size, size, max_size=None) -> Tuple[int, int]:
"""
Computes the output image size given the input image size and the desired output size.
Args:
image_size (`Tuple[int, int]`):
The input image size.
size (`int`):
The desired output size.
max_size (`int`, *optional*):
The maximum allowed output size.
"""
height, width = image_size
if max_size is not None:
min_original_size = float(min((height, width)))
max_original_size = float(max((height, width)))
if max_original_size / min_original_size * size > max_size:
size = int(round(max_size * min_original_size / max_original_size))
if (height <= width and height == size) or (width <= height and width == size):
return height, width
if width < height:
ow = size
oh = int(size * height / width)
else:
oh = size
ow = int(size * width / height)
return (oh, ow)
# Copied from transformers.models.detr.image_processing_detr.get_resize_output_image_size
def get_resize_output_image_size(
input_image: np.ndarray, size: Union[int, Tuple[int, int], List[int]], max_size: Optional[int] = None
) -> Tuple[int, int]:
"""
Computes the output image size given the input image size and the desired output size. If the desired output size
is a tuple or list, the output image size is returned as is. If the desired output size is an integer, the output
image size is computed by keeping the aspect ratio of the input image size.
Args:
image_size (`Tuple[int, int]`):
The input image size.
size (`int`):
The desired output size.
max_size (`int`, *optional*):
The maximum allowed output size.
"""
image_size = get_image_size(input_image)
if isinstance(size, (list, tuple)):
return size
return get_size_with_aspect_ratio(image_size, size, max_size)
# Copied from transformers.models.detr.image_processing_detr.get_numpy_to_framework_fn
def get_numpy_to_framework_fn(arr) -> Callable:
"""
Returns a function that converts a numpy array to the framework of the input array.
Args:
arr (`np.ndarray`): The array to convert.
"""
if isinstance(arr, np.ndarray):
return np.array
if is_tf_available() and is_tf_tensor(arr):
import tensorflow as tf
return tf.convert_to_tensor
if is_torch_available() and is_torch_tensor(arr):
import torch
return torch.tensor
if is_flax_available() and is_jax_tensor(arr):
import jax.numpy as jnp
return jnp.array
raise ValueError(f"Cannot convert arrays of type {type(arr)}")
# Copied from transformers.models.detr.image_processing_detr.safe_squeeze
def safe_squeeze(arr: np.ndarray, axis: Optional[int] = None) -> np.ndarray:
"""
Squeezes an array, but only if the axis specified has dim 1.
"""
if axis is None:
return arr.squeeze()
try:
return arr.squeeze(axis=axis)
except ValueError:
return arr
# Copied from transformers.models.detr.image_processing_detr.normalize_annotation
def normalize_annotation(annotation: Dict, image_size: Tuple[int, int]) -> Dict:
image_height, image_width = image_size
norm_annotation = {}
for key, value in annotation.items():
if key == "boxes":
boxes = value
boxes = corners_to_center_format(boxes)
boxes /= np.asarray([image_width, image_height, image_width, image_height], dtype=np.float32)
norm_annotation[key] = boxes
else:
norm_annotation[key] = value
return norm_annotation
# Copied from transformers.models.detr.image_processing_detr.max_across_indices
def max_across_indices(values: Iterable[Any]) -> List[Any]:
"""
Return the maximum value across all indices of an iterable of values.
"""
return [max(values_i) for values_i in zip(*values)]
# Copied from transformers.models.detr.image_processing_detr.get_max_height_width
def get_max_height_width(images: List[np.ndarray]) -> List[int]:
"""
Get the maximum height and width across all images in a batch.
"""
input_channel_dimension = infer_channel_dimension_format(images[0])
if input_channel_dimension == ChannelDimension.FIRST:
_, max_height, max_width = max_across_indices([img.shape for img in images])
elif input_channel_dimension == ChannelDimension.LAST:
max_height, max_width, _ = max_across_indices([img.shape for img in images])
else:
raise ValueError(f"Invalid channel dimension format: {input_channel_dimension}")
return (max_height, max_width)
# Copied from transformers.models.detr.image_processing_detr.make_pixel_mask
def make_pixel_mask(image: np.ndarray, output_size: Tuple[int, int]) -> np.ndarray:
"""
Make a pixel mask for the image, where 1 indicates a valid pixel and 0 indicates padding.
Args:
image (`np.ndarray`):
Image to make the pixel mask for.
output_size (`Tuple[int, int]`):
Output size of the mask.
"""
input_height, input_width = get_image_size(image)
mask = np.zeros(output_size, dtype=np.int64)
mask[:input_height, :input_width] = 1
return mask
# Copied from transformers.models.detr.image_processing_detr.convert_coco_poly_to_mask
def convert_coco_poly_to_mask(segmentations, height: int, width: int) -> np.ndarray:
"""
Convert a COCO polygon annotation to a mask.
Args:
segmentations (`List[List[float]]`):
List of polygons, each polygon represented by a list of x-y coordinates.
height (`int`):
Height of the mask.
width (`int`):
Width of the mask.
"""
try:
from pycocotools import mask as coco_mask
except ImportError:
raise ImportError("Pycocotools is not installed in your environment.")
masks = []
for polygons in segmentations:
rles = coco_mask.frPyObjects(polygons, height, width)
mask = coco_mask.decode(rles)
if len(mask.shape) < 3:
mask = mask[..., None]
mask = np.asarray(mask, dtype=np.uint8)
mask = np.any(mask, axis=2)
masks.append(mask)
if masks:
masks = np.stack(masks, axis=0)
else:
masks = np.zeros((0, height, width), dtype=np.uint8)
return masks
# Copied from transformers.models.detr.image_processing_detr.prepare_coco_detection_annotation with DETR->ConditionalDetr
def prepare_coco_detection_annotation(image, target, return_segmentation_masks: bool = False):
"""
Convert the target in COCO format into the format expected by ConditionalDetr.
"""
image_height, image_width = get_image_size(image)
image_id = target["image_id"]
image_id = np.asarray([image_id], dtype=np.int64)
# Get all COCO annotations for the given image.
annotations = target["annotations"]
annotations = [obj for obj in annotations if "iscrowd" not in obj or obj["iscrowd"] == 0]
classes = [obj["category_id"] for obj in annotations]
classes = np.asarray(classes, dtype=np.int64)
# for conversion to coco api
area = np.asarray([obj["area"] for obj in annotations], dtype=np.float32)
iscrowd = np.asarray([obj["iscrowd"] if "iscrowd" in obj else 0 for obj in annotations], dtype=np.int64)
boxes = [obj["bbox"] for obj in annotations]
# guard against no boxes via resizing
boxes = np.asarray(boxes, dtype=np.float32).reshape(-1, 4)
boxes[:, 2:] += boxes[:, :2]
boxes[:, 0::2] = boxes[:, 0::2].clip(min=0, max=image_width)
boxes[:, 1::2] = boxes[:, 1::2].clip(min=0, max=image_height)
keep = (boxes[:, 3] > boxes[:, 1]) & (boxes[:, 2] > boxes[:, 0])
new_target = {}
new_target["image_id"] = image_id
new_target["class_labels"] = classes[keep]
new_target["boxes"] = boxes[keep]
new_target["area"] = area[keep]
new_target["iscrowd"] = iscrowd[keep]
new_target["orig_size"] = np.asarray([int(image_height), int(image_width)], dtype=np.int64)
if annotations and "keypoints" in annotations[0]:
keypoints = [obj["keypoints"] for obj in annotations]
keypoints = np.asarray(keypoints, dtype=np.float32)
num_keypoints = keypoints.shape[0]
keypoints = keypoints.reshape((-1, 3)) if num_keypoints else keypoints
new_target["keypoints"] = keypoints[keep]
if return_segmentation_masks:
segmentation_masks = [obj["segmentation"] for obj in annotations]
masks = convert_coco_poly_to_mask(segmentation_masks, image_height, image_width)
new_target["masks"] = masks[keep]
return new_target
# Copied from transformers.models.detr.image_processing_detr.masks_to_boxes
def masks_to_boxes(masks: np.ndarray) -> np.ndarray:
"""
Compute the bounding boxes around the provided panoptic segmentation masks.
Args:
masks: masks in format `[number_masks, height, width]` where N is the number of masks
Returns:
boxes: bounding boxes in format `[number_masks, 4]` in xyxy format
"""
if masks.size == 0:
return np.zeros((0, 4))
h, w = masks.shape[-2:]
y = np.arange(0, h, dtype=np.float32)
x = np.arange(0, w, dtype=np.float32)
# see https://github.com/pytorch/pytorch/issues/50276
y, x = np.meshgrid(y, x, indexing="ij")
x_mask = masks * np.expand_dims(x, axis=0)
x_max = x_mask.reshape(x_mask.shape[0], -1).max(-1)
x = np.ma.array(x_mask, mask=~(np.array(masks, dtype=bool)))
x_min = x.filled(fill_value=1e8)
x_min = x_min.reshape(x_min.shape[0], -1).min(-1)
y_mask = masks * np.expand_dims(y, axis=0)
y_max = y_mask.reshape(x_mask.shape[0], -1).max(-1)
y = np.ma.array(y_mask, mask=~(np.array(masks, dtype=bool)))
y_min = y.filled(fill_value=1e8)
y_min = y_min.reshape(y_min.shape[0], -1).min(-1)
return np.stack([x_min, y_min, x_max, y_max], 1)
# Copied from transformers.models.detr.image_processing_detr.prepare_coco_panoptic_annotation with DETR->ConditionalDetr
def prepare_coco_panoptic_annotation(
image: np.ndarray, target: Dict, masks_path: Union[str, pathlib.Path], return_masks: bool = True
) -> Dict:
"""
Prepare a coco panoptic annotation for ConditionalDetr.
"""
image_height, image_width = get_image_size(image)
annotation_path = pathlib.Path(masks_path) / target["file_name"]
new_target = {}
new_target["image_id"] = np.asarray([target["image_id"] if "image_id" in target else target["id"]], dtype=np.int64)
new_target["size"] = np.asarray([image_height, image_width], dtype=np.int64)
new_target["orig_size"] = np.asarray([image_height, image_width], dtype=np.int64)
if "segments_info" in target:
masks = np.asarray(PIL.Image.open(annotation_path), dtype=np.uint32)
masks = rgb_to_id(masks)
ids = np.array([segment_info["id"] for segment_info in target["segments_info"]])
masks = masks == ids[:, None, None]
masks = masks.astype(np.uint8)
if return_masks:
new_target["masks"] = masks
new_target["boxes"] = masks_to_boxes(masks)
new_target["class_labels"] = np.array(
[segment_info["category_id"] for segment_info in target["segments_info"]], dtype=np.int64
)
new_target["iscrowd"] = np.asarray(
[segment_info["iscrowd"] for segment_info in target["segments_info"]], dtype=np.int64
)
new_target["area"] = np.asarray(
[segment_info["area"] for segment_info in target["segments_info"]], dtype=np.float32
)
return new_target
# Copied from transformers.models.detr.image_processing_detr.get_segmentation_image
def get_segmentation_image(
masks: np.ndarray, input_size: Tuple, target_size: Tuple, stuff_equiv_classes, deduplicate=False
):
h, w = input_size
final_h, final_w = target_size
m_id = scipy.special.softmax(masks.transpose(0, 1), -1)
if m_id.shape[-1] == 0:
# We didn't detect any mask :(
m_id = np.zeros((h, w), dtype=np.int64)
else:
m_id = m_id.argmax(-1).reshape(h, w)
if deduplicate:
# Merge the masks corresponding to the same stuff class
for equiv in stuff_equiv_classes.values():
for eq_id in equiv:
m_id[m_id == eq_id] = equiv[0]
seg_img = id_to_rgb(m_id)
seg_img = resize(seg_img, (final_w, final_h), resample=PILImageResampling.NEAREST)
return seg_img
# Copied from transformers.models.detr.image_processing_detr.get_mask_area
def get_mask_area(seg_img: np.ndarray, target_size: Tuple[int, int], n_classes: int) -> np.ndarray:
final_h, final_w = target_size
np_seg_img = seg_img.astype(np.uint8)
np_seg_img = np_seg_img.reshape(final_h, final_w, 3)
m_id = rgb_to_id(np_seg_img)
area = [(m_id == i).sum() for i in range(n_classes)]
return area
# Copied from transformers.models.detr.image_processing_detr.score_labels_from_class_probabilities
def score_labels_from_class_probabilities(logits: np.ndarray) -> Tuple[np.ndarray, np.ndarray]:
probs = scipy.special.softmax(logits, axis=-1)
labels = probs.argmax(-1, keepdims=True)
scores = np.take_along_axis(probs, labels, axis=-1)
scores, labels = scores.squeeze(-1), labels.squeeze(-1)
return scores, labels
# Copied from transformers.models.detr.image_processing_detr.post_process_panoptic_sample with DetrForSegmentation->ConditionalDetrForSegmentation
def post_process_panoptic_sample(
out_logits: np.ndarray,
masks: np.ndarray,
boxes: np.ndarray,
processed_size: Tuple[int, int],
target_size: Tuple[int, int],
is_thing_map: Dict,
threshold=0.85,
) -> Dict:
"""
Converts the output of [`ConditionalDetrForSegmentation`] into panoptic segmentation predictions for a single
sample.
Args:
out_logits (`torch.Tensor`):
The logits for this sample.
masks (`torch.Tensor`):
The predicted segmentation masks for this sample.
boxes (`torch.Tensor`):
The prediced bounding boxes for this sample. The boxes are in the normalized format `(center_x, center_y,
width, height)` and values between `[0, 1]`, relative to the size the image (disregarding padding).
processed_size (`Tuple[int, int]`):
The processed size of the image `(height, width)`, as returned by the preprocessing step i.e. the size
after data augmentation but before batching.
target_size (`Tuple[int, int]`):
The target size of the image, `(height, width)` corresponding to the requested final size of the
prediction.
is_thing_map (`Dict`):
A dictionary mapping class indices to a boolean value indicating whether the class is a thing or not.
threshold (`float`, *optional*, defaults to 0.85):
The threshold used to binarize the segmentation masks.
"""
# we filter empty queries and detection below threshold
scores, labels = score_labels_from_class_probabilities(out_logits)
keep = (labels != out_logits.shape[-1] - 1) & (scores > threshold)
cur_scores = scores[keep]
cur_classes = labels[keep]
cur_boxes = center_to_corners_format(boxes[keep])
if len(cur_boxes) != len(cur_classes):
raise ValueError("Not as many boxes as there are classes")
cur_masks = masks[keep]
cur_masks = resize(cur_masks[:, None], processed_size, resample=PILImageResampling.BILINEAR)
cur_masks = safe_squeeze(cur_masks, 1)
b, h, w = cur_masks.shape
# It may be that we have several predicted masks for the same stuff class.
# In the following, we track the list of masks ids for each stuff class (they are merged later on)
cur_masks = cur_masks.reshape(b, -1)
stuff_equiv_classes = defaultdict(list)
for k, label in enumerate(cur_classes):
if not is_thing_map[label]:
stuff_equiv_classes[label].append(k)
seg_img = get_segmentation_image(cur_masks, processed_size, target_size, stuff_equiv_classes, deduplicate=True)
area = get_mask_area(cur_masks, processed_size, n_classes=len(cur_scores))
# We filter out any mask that is too small
if cur_classes.size() > 0:
# We know filter empty masks as long as we find some
filtered_small = np.array([a <= 4 for a in area], dtype=bool)
while filtered_small.any():
cur_masks = cur_masks[~filtered_small]
cur_scores = cur_scores[~filtered_small]
cur_classes = cur_classes[~filtered_small]
seg_img = get_segmentation_image(cur_masks, (h, w), target_size, stuff_equiv_classes, deduplicate=True)
area = get_mask_area(seg_img, target_size, n_classes=len(cur_scores))
filtered_small = np.array([a <= 4 for a in area], dtype=bool)
else:
cur_classes = np.ones((1, 1), dtype=np.int64)
segments_info = [
{"id": i, "isthing": is_thing_map[cat], "category_id": int(cat), "area": a}
for i, (cat, a) in enumerate(zip(cur_classes, area))
]
del cur_classes
with io.BytesIO() as out:
PIL.Image.fromarray(seg_img).save(out, format="PNG")
predictions = {"png_string": out.getvalue(), "segments_info": segments_info}
return predictions
# Copied from transformers.models.detr.image_processing_detr.resize_annotation
def resize_annotation(
annotation: Dict[str, Any],
orig_size: Tuple[int, int],
target_size: Tuple[int, int],
threshold: float = 0.5,
resample: PILImageResampling = PILImageResampling.NEAREST,
):
"""
Resizes an annotation to a target size.
Args:
annotation (`Dict[str, Any]`):
The annotation dictionary.
orig_size (`Tuple[int, int]`):
The original size of the input image.
target_size (`Tuple[int, int]`):
The target size of the image, as returned by the preprocessing `resize` step.
threshold (`float`, *optional*, defaults to 0.5):
The threshold used to binarize the segmentation masks.
resample (`PILImageResampling`, defaults to `PILImageResampling.NEAREST`):
The resampling filter to use when resizing the masks.
"""
ratios = tuple(float(s) / float(s_orig) for s, s_orig in zip(target_size, orig_size))
ratio_height, ratio_width = ratios
new_annotation = {}
new_annotation["size"] = target_size
for key, value in annotation.items():
if key == "boxes":
boxes = value
scaled_boxes = boxes * np.asarray([ratio_width, ratio_height, ratio_width, ratio_height], dtype=np.float32)
new_annotation["boxes"] = scaled_boxes
elif key == "area":
area = value
scaled_area = area * (ratio_width * ratio_height)
new_annotation["area"] = scaled_area
elif key == "masks":
masks = value[:, None]
masks = np.array([resize(mask, target_size, resample=resample) for mask in masks])
masks = masks.astype(np.float32)
masks = masks[:, 0] > threshold
new_annotation["masks"] = masks
elif key == "size":
new_annotation["size"] = target_size
else:
new_annotation[key] = value
return new_annotation
# Copied from transformers.models.detr.image_processing_detr.binary_mask_to_rle
def binary_mask_to_rle(mask):
"""
Converts given binary mask of shape `(height, width)` to the run-length encoding (RLE) format.
Args:
mask (`torch.Tensor` or `numpy.array`):
A binary mask tensor of shape `(height, width)` where 0 denotes background and 1 denotes the target
segment_id or class_id.
Returns:
`List`: Run-length encoded list of the binary mask. Refer to COCO API for more information about the RLE
format.
"""
if is_torch_tensor(mask):
mask = mask.numpy()
pixels = mask.flatten()
pixels = np.concatenate([[0], pixels, [0]])
runs = np.where(pixels[1:] != pixels[:-1])[0] + 1
runs[1::2] -= runs[::2]
return list(runs)
# Copied from transformers.models.detr.image_processing_detr.convert_segmentation_to_rle
def convert_segmentation_to_rle(segmentation):
"""
Converts given segmentation map of shape `(height, width)` to the run-length encoding (RLE) format.
Args:
segmentation (`torch.Tensor` or `numpy.array`):
A segmentation map of shape `(height, width)` where each value denotes a segment or class id.
Returns:
`List[List]`: A list of lists, where each list is the run-length encoding of a segment / class id.
"""
segment_ids = torch.unique(segmentation)
run_length_encodings = []
for idx in segment_ids:
mask = torch.where(segmentation == idx, 1, 0)
rle = binary_mask_to_rle(mask)
run_length_encodings.append(rle)
return run_length_encodings
# Copied from transformers.models.detr.image_processing_detr.remove_low_and_no_objects
def remove_low_and_no_objects(masks, scores, labels, object_mask_threshold, num_labels):
"""
Binarize the given masks using `object_mask_threshold`, it returns the associated values of `masks`, `scores` and
`labels`.
Args:
masks (`torch.Tensor`):
A tensor of shape `(num_queries, height, width)`.
scores (`torch.Tensor`):
A tensor of shape `(num_queries)`.
labels (`torch.Tensor`):
A tensor of shape `(num_queries)`.
object_mask_threshold (`float`):
A number between 0 and 1 used to binarize the masks.
Raises:
`ValueError`: Raised when the first dimension doesn't match in all input tensors.
Returns:
`Tuple[`torch.Tensor`, `torch.Tensor`, `torch.Tensor`]`: The `masks`, `scores` and `labels` without the region
< `object_mask_threshold`.
"""
if not (masks.shape[0] == scores.shape[0] == labels.shape[0]):
raise ValueError("mask, scores and labels must have the same shape!")
to_keep = labels.ne(num_labels) & (scores > object_mask_threshold)
return masks[to_keep], scores[to_keep], labels[to_keep]
# Copied from transformers.models.detr.image_processing_detr.check_segment_validity
def check_segment_validity(mask_labels, mask_probs, k, mask_threshold=0.5, overlap_mask_area_threshold=0.8):
# Get the mask associated with the k class
mask_k = mask_labels == k
mask_k_area = mask_k.sum()
# Compute the area of all the stuff in query k
original_area = (mask_probs[k] >= mask_threshold).sum()
mask_exists = mask_k_area > 0 and original_area > 0
# Eliminate disconnected tiny segments
if mask_exists:
area_ratio = mask_k_area / original_area
if not area_ratio.item() > overlap_mask_area_threshold:
mask_exists = False
return mask_exists, mask_k
# Copied from transformers.models.detr.image_processing_detr.compute_segments
def compute_segments(
mask_probs,
pred_scores,
pred_labels,
mask_threshold: float = 0.5,
overlap_mask_area_threshold: float = 0.8,
label_ids_to_fuse: Optional[Set[int]] = None,
target_size: Tuple[int, int] = None,
):
height = mask_probs.shape[1] if target_size is None else target_size[0]
width = mask_probs.shape[2] if target_size is None else target_size[1]
segmentation = torch.zeros((height, width), dtype=torch.int32, device=mask_probs.device)
segments: List[Dict] = []
if target_size is not None:
mask_probs = nn.functional.interpolate(
mask_probs.unsqueeze(0), size=target_size, mode="bilinear", align_corners=False
)[0]
current_segment_id = 0
# Weigh each mask by its prediction score
mask_probs *= pred_scores.view(-1, 1, 1)
mask_labels = mask_probs.argmax(0) # [height, width]
# Keep track of instances of each class
stuff_memory_list: Dict[str, int] = {}
for k in range(pred_labels.shape[0]):
pred_class = pred_labels[k].item()
should_fuse = pred_class in label_ids_to_fuse
# Check if mask exists and large enough to be a segment
mask_exists, mask_k = check_segment_validity(
mask_labels, mask_probs, k, mask_threshold, overlap_mask_area_threshold
)
if mask_exists:
if pred_class in stuff_memory_list:
current_segment_id = stuff_memory_list[pred_class]
else:
current_segment_id += 1
# Add current object segment to final segmentation map
segmentation[mask_k] = current_segment_id
segment_score = round(pred_scores[k].item(), 6)
segments.append(
{
"id": current_segment_id,
"label_id": pred_class,
"was_fused": should_fuse,
"score": segment_score,
}
)
if should_fuse:
stuff_memory_list[pred_class] = current_segment_id
return segmentation, segments
class ConditionalDetrImageProcessor(BaseImageProcessor):
r"""
Constructs a Conditional Detr image processor.
Args:
format (`str`, *optional*, defaults to `"coco_detection"`):
Data format of the annotations. One of "coco_detection" or "coco_panoptic".
do_resize (`bool`, *optional*, defaults to `True`):
Controls whether to resize the image's (height, width) dimensions to the specified `size`. Can be
overridden by the `do_resize` parameter in the `preprocess` method.
size (`Dict[str, int]` *optional*, defaults to `{"shortest_edge": 800, "longest_edge": 1333}`):
Size of the image's (height, width) dimensions after resizing. Can be overridden by the `size` parameter in
the `preprocess` method.
resample (`PILImageResampling`, *optional*, defaults to `PILImageResampling.BILINEAR`):
Resampling filter to use if resizing the image.
do_rescale (`bool`, *optional*, defaults to `True`):
Controls whether to rescale the image by the specified scale `rescale_factor`. Can be overridden by the
`do_rescale` parameter in the `preprocess` method.
rescale_factor (`int` or `float`, *optional*, defaults to `1/255`):
Scale factor to use if rescaling the image. Can be overridden by the `rescale_factor` parameter in the
`preprocess` method.
do_normalize:
Controls whether to normalize the image. Can be overridden by the `do_normalize` parameter in the
`preprocess` method.
image_mean (`float` or `List[float]`, *optional*, defaults to `IMAGENET_DEFAULT_MEAN`):
Mean values to use when normalizing the image. Can be a single value or a list of values, one for each
channel. Can be overridden by the `image_mean` parameter in the `preprocess` method.
image_std (`float` or `List[float]`, *optional*, defaults to `IMAGENET_DEFAULT_STD`):
Standard deviation values to use when normalizing the image. Can be a single value or a list of values, one
for each channel. Can be overridden by the `image_std` parameter in the `preprocess` method.
do_pad (`bool`, *optional*, defaults to `True`):
Controls whether to pad the image to the largest image in a batch and create a pixel mask. Can be
overridden by the `do_pad` parameter in the `preprocess` method.
"""
model_input_names = ["pixel_values", "pixel_mask"]
# Copied from transformers.models.detr.image_processing_detr.DetrImageProcessor.__init__
def __init__(
self,
format: Union[str, AnnotionFormat] = AnnotionFormat.COCO_DETECTION,
do_resize: bool = True,
size: Dict[str, int] = None,
resample: PILImageResampling = PILImageResampling.BILINEAR,
do_rescale: bool = True,
rescale_factor: Union[int, float] = 1 / 255,
do_normalize: bool = True,
image_mean: Union[float, List[float]] = None,
image_std: Union[float, List[float]] = None,
do_pad: bool = True,
**kwargs,
) -> None:
if "pad_and_return_pixel_mask" in kwargs:
do_pad = kwargs.pop("pad_and_return_pixel_mask")
if "max_size" in kwargs:
logger.warning_once(
"The `max_size` parameter is deprecated and will be removed in v4.26. "
"Please specify in `size['longest_edge'] instead`.",
)
max_size = kwargs.pop("max_size")
else:
max_size = None if size is None else 1333
size = size if size is not None else {"shortest_edge": 800, "longest_edge": 1333}
size = get_size_dict(size, max_size=max_size, default_to_square=False)
super().__init__(**kwargs)
self.format = format
self.do_resize = do_resize
self.size = size
self.resample = resample
self.do_rescale = do_rescale
self.rescale_factor = rescale_factor
self.do_normalize = do_normalize
self.image_mean = image_mean if image_mean is not None else IMAGENET_DEFAULT_MEAN
self.image_std = image_std if image_std is not None else IMAGENET_DEFAULT_STD
self.do_pad = do_pad
@classmethod
# Copied from transformers.models.detr.image_processing_detr.DetrImageProcessor.from_dict with Detr->ConditionalDetr
def from_dict(cls, image_processor_dict: Dict[str, Any], **kwargs):
"""
Overrides the `from_dict` method from the base class to make sure parameters are updated if image processor is
created using from_dict and kwargs e.g. `ConditionalDetrImageProcessor.from_pretrained(checkpoint, size=600,
max_size=800)`
"""
image_processor_dict = image_processor_dict.copy()
if "max_size" in kwargs:
image_processor_dict["max_size"] = kwargs.pop("max_size")
if "pad_and_return_pixel_mask" in kwargs:
image_processor_dict["pad_and_return_pixel_mask"] = kwargs.pop("pad_and_return_pixel_mask")
return super().from_dict(image_processor_dict, **kwargs)
# Copied from transformers.models.detr.image_processing_detr.DetrImageProcessor.prepare_annotation with DETR->ConditionalDetr
def prepare_annotation(
self,
image: np.ndarray,
target: Dict,
format: Optional[AnnotionFormat] = None,
return_segmentation_masks: bool = None,
masks_path: Optional[Union[str, pathlib.Path]] = None,
) -> Dict:
"""
Prepare an annotation for feeding into ConditionalDetr model.
"""
format = format if format is not None else self.format
if format == AnnotionFormat.COCO_DETECTION:
return_segmentation_masks = False if return_segmentation_masks is None else return_segmentation_masks
target = prepare_coco_detection_annotation(image, target, return_segmentation_masks)
elif format == AnnotionFormat.COCO_PANOPTIC:
return_segmentation_masks = True if return_segmentation_masks is None else return_segmentation_masks
target = prepare_coco_panoptic_annotation(
image, target, masks_path=masks_path, return_masks=return_segmentation_masks
)
else:
raise ValueError(f"Format {format} is not supported.")
return target
# Copied from transformers.models.detr.image_processing_detr.DetrImageProcessor.prepare
def prepare(self, image, target, return_segmentation_masks=False, masks_path=None):
logger.warning_once(
"The `prepare` method is deprecated and will be removed in a v4.33. "
"Please use `prepare_annotation` instead. Note: the `prepare_annotation` method "
"does not return the image anymore.",
)
target = self.prepare_annotation(image, target, return_segmentation_masks, masks_path, self.format)
return image, target
# Copied from transformers.models.detr.image_processing_detr.DetrImageProcessor.convert_coco_poly_to_mask
def convert_coco_poly_to_mask(self, *args, **kwargs):
logger.warning_once("The `convert_coco_poly_to_mask` method is deprecated and will be removed in v4.33. ")
return convert_coco_poly_to_mask(*args, **kwargs)
# Copied from transformers.models.detr.image_processing_detr.DetrImageProcessor.prepare_coco_detection with DETR->ConditionalDetr
def prepare_coco_detection(self, *args, **kwargs):
logger.warning_once("The `prepare_coco_detection` method is deprecated and will be removed in v4.33. ")
return prepare_coco_detection_annotation(*args, **kwargs)
# Copied from transformers.models.detr.image_processing_detr.DetrImageProcessor.prepare_coco_panoptic
def prepare_coco_panoptic(self, *args, **kwargs):
logger.warning_once("The `prepare_coco_panoptic` method is deprecated and will be removed in v4.33. ")
return prepare_coco_panoptic_annotation(*args, **kwargs)
# Copied from transformers.models.detr.image_processing_detr.DetrImageProcessor.resize
def resize(
self,
image: np.ndarray,
size: Dict[str, int],
resample: PILImageResampling = PILImageResampling.BILINEAR,
data_format: Optional[ChannelDimension] = None,
**kwargs,
) -> np.ndarray:
"""
Resize the image to the given size. Size can be `min_size` (scalar) or `(height, width)` tuple. If size is an
int, smaller edge of the image will be matched to this number.
"""
if "max_size" in kwargs:
logger.warning_once(
"The `max_size` parameter is deprecated and will be removed in v4.26. "
"Please specify in `size['longest_edge'] instead`.",
)
max_size = kwargs.pop("max_size")
else:
max_size = None
size = get_size_dict(size, max_size=max_size, default_to_square=False)
if "shortest_edge" in size and "longest_edge" in size:
size = get_resize_output_image_size(image, size["shortest_edge"], size["longest_edge"])
elif "height" in size and "width" in size:
size = (size["height"], size["width"])
else:
raise ValueError(
"Size must contain 'height' and 'width' keys or 'shortest_edge' and 'longest_edge' keys. Got"
f" {size.keys()}."
)
image = resize(image, size=size, resample=resample, data_format=data_format)
return image
# Copied from transformers.models.detr.image_processing_detr.DetrImageProcessor.resize_annotation
def resize_annotation(
self,
annotation,
orig_size,
size,
resample: PILImageResampling = PILImageResampling.NEAREST,
) -> Dict:
"""
Resize the annotation to match the resized image. If size is an int, smaller edge of the mask will be matched
to this number.
"""
return resize_annotation(annotation, orig_size=orig_size, target_size=size, resample=resample)
# Copied from transformers.models.detr.image_processing_detr.DetrImageProcessor.rescale
def rescale(
self, image: np.ndarray, rescale_factor: Union[float, int], data_format: Optional[ChannelDimension] = None
) -> np.ndarray:
"""
Rescale the image by the given factor.
"""
return rescale(image, rescale_factor, data_format=data_format)
# Copied from transformers.models.detr.image_processing_detr.DetrImageProcessor.normalize
def normalize(
self,
image: np.ndarray,
mean: Union[float, Iterable[float]],
std: Union[float, Iterable[float]],
data_format: Optional[ChannelDimension] = None,
) -> np.ndarray:
"""
Normalize the image with the given mean and standard deviation.
"""
return normalize(image, mean=mean, std=std, data_format=data_format)
# Copied from transformers.models.detr.image_processing_detr.DetrImageProcessor.normalize_annotation
def normalize_annotation(self, annotation: Dict, image_size: Tuple[int, int]) -> Dict:
"""
Normalize the boxes in the annotation from `[top_left_x, top_left_y, bottom_right_x, bottom_right_y]` to
`[center_x, center_y, width, height]` format.
"""
return normalize_annotation(annotation, image_size=image_size)
# Copied from transformers.models.detr.image_processing_detr.DetrImageProcessor._pad_image
def _pad_image(
self,
image: np.ndarray,
output_size: Tuple[int, int],
constant_values: Union[float, Iterable[float]] = 0,
data_format: Optional[ChannelDimension] = None,
) -> np.ndarray:
"""
Pad an image with zeros to the given size.
"""
input_height, input_width = get_image_size(image)
output_height, output_width = output_size
pad_bottom = output_height - input_height
pad_right = output_width - input_width
padding = ((0, pad_bottom), (0, pad_right))
padded_image = pad(
image, padding, mode=PaddingMode.CONSTANT, constant_values=constant_values, data_format=data_format
)
return padded_image
# Copied from transformers.models.detr.image_processing_detr.DetrImageProcessor.pad
def pad(
self,
images: List[np.ndarray],
constant_values: Union[float, Iterable[float]] = 0,
return_pixel_mask: bool = True,
return_tensors: Optional[Union[str, TensorType]] = None,
data_format: Optional[ChannelDimension] = None,
) -> np.ndarray:
"""
Pads a batch of images to the bottom and right of the image with zeros to the size of largest height and width
in the batch and optionally returns their corresponding pixel mask.
Args:
image (`np.ndarray`):
Image to pad.
constant_values (`float` or `Iterable[float]`, *optional*):
The value to use for the padding if `mode` is `"constant"`.
return_pixel_mask (`bool`, *optional*, defaults to `True`):
Whether to return a pixel mask.
input_channel_dimension (`ChannelDimension`, *optional*):
The channel dimension format of the image. If not provided, it will be inferred from the input image.
data_format (`str` or `ChannelDimension`, *optional*):
The channel dimension format of the image. If not provided, it will be the same as the input image.
"""
pad_size = get_max_height_width(images)
padded_images = [
self._pad_image(image, pad_size, constant_values=constant_values, data_format=data_format)
for image in images
]
data = {"pixel_values": padded_images}
if return_pixel_mask:
masks = [make_pixel_mask(image=image, output_size=pad_size) for image in images]
data["pixel_mask"] = masks
return BatchFeature(data=data, tensor_type=return_tensors)
# Copied from transformers.models.detr.image_processing_detr.DetrImageProcessor.preprocess
def preprocess(
self,
images: ImageInput,
annotations: Optional[Union[AnnotationType, List[AnnotationType]]] = None,
return_segmentation_masks: bool = None,
masks_path: Optional[Union[str, pathlib.Path]] = None,
do_resize: Optional[bool] = None,
size: Optional[Dict[str, int]] = None,
resample=None, # PILImageResampling
do_rescale: Optional[bool] = None,
rescale_factor: Optional[Union[int, float]] = None,
do_normalize: Optional[bool] = None,
image_mean: Optional[Union[float, List[float]]] = None,
image_std: Optional[Union[float, List[float]]] = None,
do_pad: Optional[bool] = None,
format: Optional[Union[str, AnnotionFormat]] = None,
return_tensors: Optional[Union[TensorType, str]] = None,
data_format: Union[str, ChannelDimension] = ChannelDimension.FIRST,
**kwargs,
) -> BatchFeature:
"""
Preprocess an image or a batch of images so that it can be used by the model.
Args:
images (`ImageInput`):
Image or batch of images to preprocess.
annotations (`AnnotationType` or `List[AnnotationType]`, *optional*):
List of annotations associated with the image or batch of images. If annotation is for object
detection, the annotations should be a dictionary with the following keys:
- "image_id" (`int`): The image id.
- "annotations" (`List[Dict]`): List of annotations for an image. Each annotation should be a
dictionary. An image can have no annotations, in which case the list should be empty.
If annotation is for segmentation, the annotations should be a dictionary with the following keys:
- "image_id" (`int`): The image id.
- "segments_info" (`List[Dict]`): List of segments for an image. Each segment should be a dictionary.
An image can have no segments, in which case the list should be empty.
- "file_name" (`str`): The file name of the image.
return_segmentation_masks (`bool`, *optional*, defaults to self.return_segmentation_masks):
Whether to return segmentation masks.
masks_path (`str` or `pathlib.Path`, *optional*):
Path to the directory containing the segmentation masks.
do_resize (`bool`, *optional*, defaults to self.do_resize):
Whether to resize the image.
size (`Dict[str, int]`, *optional*, defaults to self.size):
Size of the image after resizing.
resample (`PILImageResampling`, *optional*, defaults to self.resample):
Resampling filter to use when resizing the image.
do_rescale (`bool`, *optional*, defaults to self.do_rescale):
Whether to rescale the image.
rescale_factor (`float`, *optional*, defaults to self.rescale_factor):
Rescale factor to use when rescaling the image.
do_normalize (`bool`, *optional*, defaults to self.do_normalize):
Whether to normalize the image.
image_mean (`float` or `List[float]`, *optional*, defaults to self.image_mean):
Mean to use when normalizing the image.
image_std (`float` or `List[float]`, *optional*, defaults to self.image_std):
Standard deviation to use when normalizing the image.
do_pad (`bool`, *optional*, defaults to self.do_pad):
Whether to pad the image.
format (`str` or `AnnotionFormat`, *optional*, defaults to self.format):
Format of the annotations.
return_tensors (`str` or `TensorType`, *optional*, defaults to self.return_tensors):
Type of tensors to return. If `None`, will return the list of images.
data_format (`str` or `ChannelDimension`, *optional*, defaults to self.data_format):
The channel dimension format of the image. If not provided, it will be the same as the input image.
"""
if "pad_and_return_pixel_mask" in kwargs:
logger.warning_once(
"The `pad_and_return_pixel_mask` argument is deprecated and will be removed in a future version, "
"use `do_pad` instead."
)
do_pad = kwargs.pop("pad_and_return_pixel_mask")
max_size = None
if "max_size" in kwargs:
logger.warning_once(
"The `max_size` argument is deprecated and will be removed in a future version, use"
" `size['longest_edge']` instead."
)
size = kwargs.pop("max_size")
do_resize = self.do_resize if do_resize is None else do_resize
size = self.size if size is None else size
size = get_size_dict(size=size, max_size=max_size, default_to_square=False)
resample = self.resample if resample is None else resample
do_rescale = self.do_rescale if do_rescale is None else do_rescale
rescale_factor = self.rescale_factor if rescale_factor is None else rescale_factor
do_normalize = self.do_normalize if do_normalize is None else do_normalize
image_mean = self.image_mean if image_mean is None else image_mean
image_std = self.image_std if image_std is None else image_std
do_pad = self.do_pad if do_pad is None else do_pad
format = self.format if format is None else format
if do_resize is not None and size is None:
raise ValueError("Size and max_size must be specified if do_resize is True.")
if do_rescale is not None and rescale_factor is None:
raise ValueError("Rescale factor must be specified if do_rescale is True.")
if do_normalize is not None and (image_mean is None or image_std is None):
raise ValueError("Image mean and std must be specified if do_normalize is True.")
images = make_list_of_images(images)
if annotations is not None and isinstance(annotations, dict):
annotations = [annotations]
if annotations is not None and len(images) != len(annotations):
raise ValueError(
f"The number of images ({len(images)}) and annotations ({len(annotations)}) do not match."
)
if not valid_images(images):
raise ValueError(
"Invalid image type. Must be of type PIL.Image.Image, numpy.ndarray, "
"torch.Tensor, tf.Tensor or jax.ndarray."
)
format = AnnotionFormat(format)
if annotations is not None:
if format == AnnotionFormat.COCO_DETECTION and not valid_coco_detection_annotations(annotations):
raise ValueError(
"Invalid COCO detection annotations. Annotations must a dict (single image) of list of dicts"
"(batch of images) with the following keys: `image_id` and `annotations`, with the latter "
"being a list of annotations in the COCO format."
)
elif format == AnnotionFormat.COCO_PANOPTIC and not valid_coco_panoptic_annotations(annotations):
raise ValueError(
"Invalid COCO panoptic annotations. Annotations must a dict (single image) of list of dicts "
"(batch of images) with the following keys: `image_id`, `file_name` and `segments_info`, with "
"the latter being a list of annotations in the COCO format."
)
elif format not in SUPPORTED_ANNOTATION_FORMATS:
raise ValueError(
f"Unsupported annotation format: {format} must be one of {SUPPORTED_ANNOTATION_FORMATS}"
)
if (
masks_path is not None
and format == AnnotionFormat.COCO_PANOPTIC
and not isinstance(masks_path, (pathlib.Path, str))
):
raise ValueError(
"The path to the directory containing the mask PNG files should be provided as a"
f" `pathlib.Path` or string object, but is {type(masks_path)} instead."
)
# All transformations expect numpy arrays
images = [to_numpy_array(image) for image in images]
# prepare (COCO annotations as a list of Dict -> DETR target as a single Dict per image)
if annotations is not None:
prepared_images = []
prepared_annotations = []
for image, target in zip(images, annotations):
target = self.prepare_annotation(
image, target, format, return_segmentation_masks=return_segmentation_masks, masks_path=masks_path
)
prepared_images.append(image)
prepared_annotations.append(target)
images = prepared_images
annotations = prepared_annotations
del prepared_images, prepared_annotations
# transformations
if do_resize:
if annotations is not None:
resized_images, resized_annotations = [], []
for image, target in zip(images, annotations):
orig_size = get_image_size(image)
resized_image = self.resize(image, size=size, max_size=max_size, resample=resample)
resized_annotation = self.resize_annotation(target, orig_size, get_image_size(resized_image))
resized_images.append(resized_image)
resized_annotations.append(resized_annotation)
images = resized_images
annotations = resized_annotations
del resized_images, resized_annotations
else:
images = [self.resize(image, size=size, resample=resample) for image in images]
if do_rescale:
images = [self.rescale(image, rescale_factor) for image in images]
if do_normalize:
images = [self.normalize(image, image_mean, image_std) for image in images]
if annotations is not None:
annotations = [
self.normalize_annotation(annotation, get_image_size(image))
for annotation, image in zip(annotations, images)
]
if do_pad:
# Pads images and returns their mask: {'pixel_values': ..., 'pixel_mask': ...}
data = self.pad(images, return_pixel_mask=True, data_format=data_format)
else:
images = [to_channel_dimension_format(image, data_format) for image in images]
data = {"pixel_values": images}
encoded_inputs = BatchFeature(data=data, tensor_type=return_tensors)
if annotations is not None:
encoded_inputs["labels"] = [
BatchFeature(annotation, tensor_type=return_tensors) for annotation in annotations
]
return encoded_inputs
# POSTPROCESSING METHODS - TODO: add support for other frameworks
def post_process(self, outputs, target_sizes):
"""
Converts the output of [`ConditionalDetrForObjectDetection`] into the format expected by the COCO api. Only
supports PyTorch.
Args:
outputs ([`ConditionalDetrObjectDetectionOutput`]):
Raw outputs of the model.
target_sizes (`torch.Tensor` of shape `(batch_size, 2)`):
Tensor containing the size (h, w) of each image of the batch. For evaluation, this must be the original
image size (before any data augmentation). For visualization, this should be the image size after data
augment, but before padding.
Returns:
`List[Dict]`: A list of dictionaries, each dictionary containing the scores, labels and boxes for an image
in the batch as predicted by the model.
"""
logging.warning_once(
"`post_process` is deprecated and will be removed in v5 of Transformers, please use"
" `post_process_object_detection` instead, with `threshold=0.` for equivalent results.",
)
out_logits, out_bbox = outputs.logits, outputs.pred_boxes
if len(out_logits) != len(target_sizes):
raise ValueError("Make sure that you pass in as many target sizes as the batch dimension of the logits")
if target_sizes.shape[1] != 2:
raise ValueError("Each element of target_sizes must contain the size (h, w) of each image of the batch")
prob = out_logits.sigmoid()
topk_values, topk_indexes = torch.topk(prob.view(out_logits.shape[0], -1), 300, dim=1)
scores = topk_values
topk_boxes = torch.div(topk_indexes, out_logits.shape[2], rounding_mode="floor")
labels = topk_indexes % out_logits.shape[2]
boxes = center_to_corners_format(out_bbox)
boxes = torch.gather(boxes, 1, topk_boxes.unsqueeze(-1).repeat(1, 1, 4))
# and from relative [0, 1] to absolute [0, height] coordinates
img_h, img_w = target_sizes.unbind(1)
scale_fct = torch.stack([img_w, img_h, img_w, img_h], dim=1)
boxes = boxes * scale_fct[:, None, :]
results = [{"scores": s, "labels": l, "boxes": b} for s, l, b in zip(scores, labels, boxes)]
return results
# Copied from transformers.models.deformable_detr.image_processing_deformable_detr.DeformableDetrImageProcessor.post_process_object_detection with DeformableDetr->ConditionalDetr
def post_process_object_detection(
self, outputs, threshold: float = 0.5, target_sizes: Union[TensorType, List[Tuple]] = None, top_k: int = 100
):
"""
Converts the raw output of [`ConditionalDetrForObjectDetection`] into final bounding boxes in (top_left_x,
top_left_y, bottom_right_x, bottom_right_y) format. Only supports PyTorch.
Args:
outputs ([`DetrObjectDetectionOutput`]):
Raw outputs of the model.
threshold (`float`, *optional*):
Score threshold to keep object detection predictions.
target_sizes (`torch.Tensor` or `List[Tuple[int, int]]`, *optional*):
Tensor of shape `(batch_size, 2)` or list of tuples (`Tuple[int, int]`) containing the target size
(height, width) of each image in the batch. If left to None, predictions will not be resized.
top_k (`int`, *optional*, defaults to 100):
Keep only top k bounding boxes before filtering by thresholding.
Returns:
`List[Dict]`: A list of dictionaries, each dictionary containing the scores, labels and boxes for an image
in the batch as predicted by the model.
"""
out_logits, out_bbox = outputs.logits, outputs.pred_boxes
if target_sizes is not None:
if len(out_logits) != len(target_sizes):
raise ValueError(
"Make sure that you pass in as many target sizes as the batch dimension of the logits"
)
prob = out_logits.sigmoid()
prob = prob.view(out_logits.shape[0], -1)
k_value = min(top_k, prob.size(1))
topk_values, topk_indexes = torch.topk(prob, k_value, dim=1)
scores = topk_values
topk_boxes = torch.div(topk_indexes, out_logits.shape[2], rounding_mode="floor")
labels = topk_indexes % out_logits.shape[2]
boxes = center_to_corners_format(out_bbox)
boxes = torch.gather(boxes, 1, topk_boxes.unsqueeze(-1).repeat(1, 1, 4))
# and from relative [0, 1] to absolute [0, height] coordinates
if isinstance(target_sizes, List):
img_h = torch.Tensor([i[0] for i in target_sizes])
img_w = torch.Tensor([i[1] for i in target_sizes])
else:
img_h, img_w = target_sizes.unbind(1)
scale_fct = torch.stack([img_w, img_h, img_w, img_h], dim=1).to(boxes.device)
boxes = boxes * scale_fct[:, None, :]
results = []
for s, l, b in zip(scores, labels, boxes):
score = s[s > threshold]
label = l[s > threshold]
box = b[s > threshold]
results.append({"scores": score, "labels": label, "boxes": box})
return results
# Copied from transformers.models.detr.image_processing_detr.DetrImageProcessor.post_process_semantic_segmentation with Detr->ConditionalDetr
def post_process_semantic_segmentation(self, outputs, target_sizes: List[Tuple[int, int]] = None):
"""
Converts the output of [`ConditionalDetrForSegmentation`] into semantic segmentation maps. Only supports
PyTorch.
Args:
outputs ([`ConditionalDetrForSegmentation`]):
Raw outputs of the model.
target_sizes (`List[Tuple[int, int]]`, *optional*):
A list of tuples (`Tuple[int, int]`) containing the target size (height, width) of each image in the
batch. If unset, predictions will not be resized.
Returns:
`List[torch.Tensor]`:
A list of length `batch_size`, where each item is a semantic segmentation map of shape (height, width)
corresponding to the target_sizes entry (if `target_sizes` is specified). Each entry of each
`torch.Tensor` correspond to a semantic class id.
"""
class_queries_logits = outputs.logits # [batch_size, num_queries, num_classes+1]
masks_queries_logits = outputs.pred_masks # [batch_size, num_queries, height, width]
# Remove the null class `[..., :-1]`
masks_classes = class_queries_logits.softmax(dim=-1)[..., :-1]
masks_probs = masks_queries_logits.sigmoid() # [batch_size, num_queries, height, width]
# Semantic segmentation logits of shape (batch_size, num_classes, height, width)
segmentation = torch.einsum("bqc, bqhw -> bchw", masks_classes, masks_probs)
batch_size = class_queries_logits.shape[0]
# Resize logits and compute semantic segmentation maps
if target_sizes is not None:
if batch_size != len(target_sizes):
raise ValueError(
"Make sure that you pass in as many target sizes as the batch dimension of the logits"
)
semantic_segmentation = []
for idx in range(batch_size):
resized_logits = nn.functional.interpolate(
segmentation[idx].unsqueeze(dim=0), size=target_sizes[idx], mode="bilinear", align_corners=False
)
semantic_map = resized_logits[0].argmax(dim=0)
semantic_segmentation.append(semantic_map)
else:
semantic_segmentation = segmentation.argmax(dim=1)
semantic_segmentation = [semantic_segmentation[i] for i in range(semantic_segmentation.shape[0])]
return semantic_segmentation
# Copied from transformers.models.detr.image_processing_detr.DetrImageProcessor.post_process_instance_segmentation with Detr->ConditionalDetr
def post_process_instance_segmentation(
self,
outputs,
threshold: float = 0.5,
mask_threshold: float = 0.5,
overlap_mask_area_threshold: float = 0.8,
target_sizes: Optional[List[Tuple[int, int]]] = None,
return_coco_annotation: Optional[bool] = False,
) -> List[Dict]:
"""
Converts the output of [`ConditionalDetrForSegmentation`] into instance segmentation predictions. Only supports
PyTorch.
Args:
outputs ([`ConditionalDetrForSegmentation`]):
Raw outputs of the model.
threshold (`float`, *optional*, defaults to 0.5):
The probability score threshold to keep predicted instance masks.
mask_threshold (`float`, *optional*, defaults to 0.5):
Threshold to use when turning the predicted masks into binary values.
overlap_mask_area_threshold (`float`, *optional*, defaults to 0.8):
The overlap mask area threshold to merge or discard small disconnected parts within each binary
instance mask.
target_sizes (`List[Tuple]`, *optional*):
List of length (batch_size), where each list item (`Tuple[int, int]]`) corresponds to the requested
final size (height, width) of each prediction. If unset, predictions will not be resized.
return_coco_annotation (`bool`, *optional*):
Defaults to `False`. If set to `True`, segmentation maps are returned in COCO run-length encoding (RLE)
format.
Returns:
`List[Dict]`: A list of dictionaries, one per image, each dictionary containing two keys:
- **segmentation** -- A tensor of shape `(height, width)` where each pixel represents a `segment_id` or
`List[List]` run-length encoding (RLE) of the segmentation map if return_coco_annotation is set to
`True`. Set to `None` if no mask if found above `threshold`.
- **segments_info** -- A dictionary that contains additional information on each segment.
- **id** -- An integer representing the `segment_id`.
- **label_id** -- An integer representing the label / semantic class id corresponding to `segment_id`.
- **score** -- Prediction score of segment with `segment_id`.
"""
class_queries_logits = outputs.logits # [batch_size, num_queries, num_classes+1]
masks_queries_logits = outputs.pred_masks # [batch_size, num_queries, height, width]
batch_size = class_queries_logits.shape[0]
num_labels = class_queries_logits.shape[-1] - 1
mask_probs = masks_queries_logits.sigmoid() # [batch_size, num_queries, height, width]
# Predicted label and score of each query (batch_size, num_queries)
pred_scores, pred_labels = nn.functional.softmax(class_queries_logits, dim=-1).max(-1)
# Loop over items in batch size
results: List[Dict[str, TensorType]] = []
for i in range(batch_size):
mask_probs_item, pred_scores_item, pred_labels_item = remove_low_and_no_objects(
mask_probs[i], pred_scores[i], pred_labels[i], threshold, num_labels
)
# No mask found
if mask_probs_item.shape[0] <= 0:
height, width = target_sizes[i] if target_sizes is not None else mask_probs_item.shape[1:]
segmentation = torch.zeros((height, width)) - 1
results.append({"segmentation": segmentation, "segments_info": []})
continue
# Get segmentation map and segment information of batch item
target_size = target_sizes[i] if target_sizes is not None else None
segmentation, segments = compute_segments(
mask_probs=mask_probs_item,
pred_scores=pred_scores_item,
pred_labels=pred_labels_item,
mask_threshold=mask_threshold,
overlap_mask_area_threshold=overlap_mask_area_threshold,
label_ids_to_fuse=[],
target_size=target_size,
)
# Return segmentation map in run-length encoding (RLE) format
if return_coco_annotation:
segmentation = convert_segmentation_to_rle(segmentation)
results.append({"segmentation": segmentation, "segments_info": segments})
return results
# Copied from transformers.models.detr.image_processing_detr.DetrImageProcessor.post_process_panoptic_segmentation with Detr->ConditionalDetr
def post_process_panoptic_segmentation(
self,
outputs,
threshold: float = 0.5,
mask_threshold: float = 0.5,
overlap_mask_area_threshold: float = 0.8,
label_ids_to_fuse: Optional[Set[int]] = None,
target_sizes: Optional[List[Tuple[int, int]]] = None,
) -> List[Dict]:
"""
Converts the output of [`ConditionalDetrForSegmentation`] into image panoptic segmentation predictions. Only
supports PyTorch.
Args:
outputs ([`ConditionalDetrForSegmentation`]):
The outputs from [`ConditionalDetrForSegmentation`].
threshold (`float`, *optional*, defaults to 0.5):
The probability score threshold to keep predicted instance masks.
mask_threshold (`float`, *optional*, defaults to 0.5):
Threshold to use when turning the predicted masks into binary values.
overlap_mask_area_threshold (`float`, *optional*, defaults to 0.8):
The overlap mask area threshold to merge or discard small disconnected parts within each binary
instance mask.
label_ids_to_fuse (`Set[int]`, *optional*):
The labels in this state will have all their instances be fused together. For instance we could say
there can only be one sky in an image, but several persons, so the label ID for sky would be in that
set, but not the one for person.
target_sizes (`List[Tuple]`, *optional*):
List of length (batch_size), where each list item (`Tuple[int, int]]`) corresponds to the requested
final size (height, width) of each prediction in batch. If unset, predictions will not be resized.
Returns:
`List[Dict]`: A list of dictionaries, one per image, each dictionary containing two keys:
- **segmentation** -- a tensor of shape `(height, width)` where each pixel represents a `segment_id` or
`None` if no mask if found above `threshold`. If `target_sizes` is specified, segmentation is resized to
the corresponding `target_sizes` entry.
- **segments_info** -- A dictionary that contains additional information on each segment.
- **id** -- an integer representing the `segment_id`.
- **label_id** -- An integer representing the label / semantic class id corresponding to `segment_id`.
- **was_fused** -- a boolean, `True` if `label_id` was in `label_ids_to_fuse`, `False` otherwise.
Multiple instances of the same class / label were fused and assigned a single `segment_id`.
- **score** -- Prediction score of segment with `segment_id`.
"""
if label_ids_to_fuse is None:
logger.warning_once("`label_ids_to_fuse` unset. No instance will be fused.")
label_ids_to_fuse = set()
class_queries_logits = outputs.logits # [batch_size, num_queries, num_classes+1]
masks_queries_logits = outputs.pred_masks # [batch_size, num_queries, height, width]
batch_size = class_queries_logits.shape[0]
num_labels = class_queries_logits.shape[-1] - 1
mask_probs = masks_queries_logits.sigmoid() # [batch_size, num_queries, height, width]
# Predicted label and score of each query (batch_size, num_queries)
pred_scores, pred_labels = nn.functional.softmax(class_queries_logits, dim=-1).max(-1)
# Loop over items in batch size
results: List[Dict[str, TensorType]] = []
for i in range(batch_size):
mask_probs_item, pred_scores_item, pred_labels_item = remove_low_and_no_objects(
mask_probs[i], pred_scores[i], pred_labels[i], threshold, num_labels
)
# No mask found
if mask_probs_item.shape[0] <= 0:
height, width = target_sizes[i] if target_sizes is not None else mask_probs_item.shape[1:]
segmentation = torch.zeros((height, width)) - 1
results.append({"segmentation": segmentation, "segments_info": []})
continue
# Get segmentation map and segment information of batch item
target_size = target_sizes[i] if target_sizes is not None else None
segmentation, segments = compute_segments(
mask_probs=mask_probs_item,
pred_scores=pred_scores_item,
pred_labels=pred_labels_item,
mask_threshold=mask_threshold,
overlap_mask_area_threshold=overlap_mask_area_threshold,
label_ids_to_fuse=label_ids_to_fuse,
target_size=target_size,
)
results.append({"segmentation": segmentation, "segments_info": segments})
return results
| 70,534 | 44.185778 | 182 | py |
transformers | transformers-main/src/transformers/models/conditional_detr/configuration_conditional_detr.py | # coding=utf-8
# Copyright 2022 The HuggingFace Inc. team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
""" Conditional DETR model configuration"""
import copy
from collections import OrderedDict
from typing import Mapping
from packaging import version
from ...configuration_utils import PretrainedConfig
from ...onnx import OnnxConfig
from ...utils import logging
from ..auto import CONFIG_MAPPING
logger = logging.get_logger(__name__)
CONDITIONAL_DETR_PRETRAINED_CONFIG_ARCHIVE_MAP = {
"microsoft/conditional-detr-resnet-50": (
"https://huggingface.co/microsoft/conditional-detr-resnet-50/resolve/main/config.json"
),
}
class ConditionalDetrConfig(PretrainedConfig):
r"""
This is the configuration class to store the configuration of a [`ConditionalDetrModel`]. It is used to instantiate
a Conditional DETR model according to the specified arguments, defining the model architecture. Instantiating a
configuration with the defaults will yield a similar configuration to that of the Conditional DETR
[microsoft/conditional-detr-resnet-50](https://huggingface.co/microsoft/conditional-detr-resnet-50) architecture.
Configuration objects inherit from [`PretrainedConfig`] and can be used to control the model outputs. Read the
documentation from [`PretrainedConfig`] for more information.
Args:
use_timm_backbone (`bool`, *optional*, defaults to `True`):
Whether or not to use the `timm` library for the backbone. If set to `False`, will use the [`AutoBackbone`]
API.
backbone_config (`PretrainedConfig` or `dict`, *optional*):
The configuration of the backbone model. Only used in case `use_timm_backbone` is set to `False` in which
case it will default to `ResNetConfig()`.
num_channels (`int`, *optional*, defaults to 3):
The number of input channels.
num_queries (`int`, *optional*, defaults to 100):
Number of object queries, i.e. detection slots. This is the maximal number of objects
[`ConditionalDetrModel`] can detect in a single image. For COCO, we recommend 100 queries.
d_model (`int`, *optional*, defaults to 256):
Dimension of the layers.
encoder_layers (`int`, *optional*, defaults to 6):
Number of encoder layers.
decoder_layers (`int`, *optional*, defaults to 6):
Number of decoder layers.
encoder_attention_heads (`int`, *optional*, defaults to 8):
Number of attention heads for each attention layer in the Transformer encoder.
decoder_attention_heads (`int`, *optional*, defaults to 8):
Number of attention heads for each attention layer in the Transformer decoder.
decoder_ffn_dim (`int`, *optional*, defaults to 2048):
Dimension of the "intermediate" (often named feed-forward) layer in decoder.
encoder_ffn_dim (`int`, *optional*, defaults to 2048):
Dimension of the "intermediate" (often named feed-forward) layer in decoder.
activation_function (`str` or `function`, *optional*, defaults to `"relu"`):
The non-linear activation function (function or string) in the encoder and pooler. If string, `"gelu"`,
`"relu"`, `"silu"` and `"gelu_new"` are supported.
dropout (`float`, *optional*, defaults to 0.1):
The dropout probability for all fully connected layers in the embeddings, encoder, and pooler.
attention_dropout (`float`, *optional*, defaults to 0.0):
The dropout ratio for the attention probabilities.
activation_dropout (`float`, *optional*, defaults to 0.0):
The dropout ratio for activations inside the fully connected layer.
init_std (`float`, *optional*, defaults to 0.02):
The standard deviation of the truncated_normal_initializer for initializing all weight matrices.
init_xavier_std (`float`, *optional*, defaults to 1):
The scaling factor used for the Xavier initialization gain in the HM Attention map module.
encoder_layerdrop (`float`, *optional*, defaults to 0.0):
The LayerDrop probability for the encoder. See the [LayerDrop paper](see https://arxiv.org/abs/1909.11556)
for more details.
decoder_layerdrop (`float`, *optional*, defaults to 0.0):
The LayerDrop probability for the decoder. See the [LayerDrop paper](see https://arxiv.org/abs/1909.11556)
for more details.
auxiliary_loss (`bool`, *optional*, defaults to `False`):
Whether auxiliary decoding losses (loss at each decoder layer) are to be used.
position_embedding_type (`str`, *optional*, defaults to `"sine"`):
Type of position embeddings to be used on top of the image features. One of `"sine"` or `"learned"`.
backbone (`str`, *optional*, defaults to `"resnet50"`):
Name of convolutional backbone to use in case `use_timm_backbone` = `True`. Supports any convolutional
backbone from the timm package. For a list of all available models, see [this
page](https://rwightman.github.io/pytorch-image-models/#load-a-pretrained-model).
use_pretrained_backbone (`bool`, *optional*, defaults to `True`):
Whether to use pretrained weights for the backbone. Only supported when `use_timm_backbone` = `True`.
dilation (`bool`, *optional*, defaults to `False`):
Whether to replace stride with dilation in the last convolutional block (DC5). Only supported when
`use_timm_backbone` = `True`.
class_cost (`float`, *optional*, defaults to 1):
Relative weight of the classification error in the Hungarian matching cost.
bbox_cost (`float`, *optional*, defaults to 5):
Relative weight of the L1 error of the bounding box coordinates in the Hungarian matching cost.
giou_cost (`float`, *optional*, defaults to 2):
Relative weight of the generalized IoU loss of the bounding box in the Hungarian matching cost.
mask_loss_coefficient (`float`, *optional*, defaults to 1):
Relative weight of the Focal loss in the panoptic segmentation loss.
dice_loss_coefficient (`float`, *optional*, defaults to 1):
Relative weight of the DICE/F-1 loss in the panoptic segmentation loss.
bbox_loss_coefficient (`float`, *optional*, defaults to 5):
Relative weight of the L1 bounding box loss in the object detection loss.
giou_loss_coefficient (`float`, *optional*, defaults to 2):
Relative weight of the generalized IoU loss in the object detection loss.
eos_coefficient (`float`, *optional*, defaults to 0.1):
Relative classification weight of the 'no-object' class in the object detection loss.
focal_alpha (`float`, *optional*, defaults to 0.25):
Alpha parameter in the focal loss.
Examples:
```python
>>> from transformers import ConditionalDetrConfig, ConditionalDetrModel
>>> # Initializing a Conditional DETR microsoft/conditional-detr-resnet-50 style configuration
>>> configuration = ConditionalDetrConfig()
>>> # Initializing a model (with random weights) from the microsoft/conditional-detr-resnet-50 style configuration
>>> model = ConditionalDetrModel(configuration)
>>> # Accessing the model configuration
>>> configuration = model.config
```"""
model_type = "conditional_detr"
keys_to_ignore_at_inference = ["past_key_values"]
attribute_map = {
"hidden_size": "d_model",
"num_attention_heads": "encoder_attention_heads",
}
def __init__(
self,
use_timm_backbone=True,
backbone_config=None,
num_channels=3,
num_queries=300,
encoder_layers=6,
encoder_ffn_dim=2048,
encoder_attention_heads=8,
decoder_layers=6,
decoder_ffn_dim=2048,
decoder_attention_heads=8,
encoder_layerdrop=0.0,
decoder_layerdrop=0.0,
is_encoder_decoder=True,
activation_function="relu",
d_model=256,
dropout=0.1,
attention_dropout=0.0,
activation_dropout=0.0,
init_std=0.02,
init_xavier_std=1.0,
auxiliary_loss=False,
position_embedding_type="sine",
backbone="resnet50",
use_pretrained_backbone=True,
dilation=False,
class_cost=2,
bbox_cost=5,
giou_cost=2,
mask_loss_coefficient=1,
dice_loss_coefficient=1,
cls_loss_coefficient=2,
bbox_loss_coefficient=5,
giou_loss_coefficient=2,
focal_alpha=0.25,
**kwargs,
):
if backbone_config is not None and use_timm_backbone:
raise ValueError("You can't specify both `backbone_config` and `use_timm_backbone`.")
if not use_timm_backbone:
if backbone_config is None:
logger.info("`backbone_config` is `None`. Initializing the config with the default `ResNet` backbone.")
backbone_config = CONFIG_MAPPING["resnet"](out_features=["stage4"])
elif isinstance(backbone_config, dict):
backbone_model_type = backbone_config.get("model_type")
config_class = CONFIG_MAPPING[backbone_model_type]
backbone_config = config_class.from_dict(backbone_config)
self.use_timm_backbone = use_timm_backbone
self.backbone_config = backbone_config
self.num_channels = num_channels
self.num_queries = num_queries
self.d_model = d_model
self.encoder_ffn_dim = encoder_ffn_dim
self.encoder_layers = encoder_layers
self.encoder_attention_heads = encoder_attention_heads
self.decoder_ffn_dim = decoder_ffn_dim
self.decoder_layers = decoder_layers
self.decoder_attention_heads = decoder_attention_heads
self.dropout = dropout
self.attention_dropout = attention_dropout
self.activation_dropout = activation_dropout
self.activation_function = activation_function
self.init_std = init_std
self.init_xavier_std = init_xavier_std
self.encoder_layerdrop = encoder_layerdrop
self.decoder_layerdrop = decoder_layerdrop
self.num_hidden_layers = encoder_layers
self.auxiliary_loss = auxiliary_loss
self.position_embedding_type = position_embedding_type
self.backbone = backbone
self.use_pretrained_backbone = use_pretrained_backbone
self.dilation = dilation
# Hungarian matcher
self.class_cost = class_cost
self.bbox_cost = bbox_cost
self.giou_cost = giou_cost
# Loss coefficients
self.mask_loss_coefficient = mask_loss_coefficient
self.dice_loss_coefficient = dice_loss_coefficient
self.cls_loss_coefficient = cls_loss_coefficient
self.bbox_loss_coefficient = bbox_loss_coefficient
self.giou_loss_coefficient = giou_loss_coefficient
self.focal_alpha = focal_alpha
super().__init__(is_encoder_decoder=is_encoder_decoder, **kwargs)
@property
def num_attention_heads(self) -> int:
return self.encoder_attention_heads
@property
def hidden_size(self) -> int:
return self.d_model
def to_dict(self):
"""
Serializes this instance to a Python dictionary. Override the default [`~PretrainedConfig.to_dict`].
Returns:
`Dict[str, any]`: Dictionary of all the attributes that make up this configuration instance,
"""
output = copy.deepcopy(self.__dict__)
if self.backbone_config is not None:
output["backbone_config"] = self.backbone_config.to_dict()
output["model_type"] = self.__class__.model_type
return output
class ConditionalDetrOnnxConfig(OnnxConfig):
torch_onnx_minimum_version = version.parse("1.11")
@property
def inputs(self) -> Mapping[str, Mapping[int, str]]:
return OrderedDict(
[
("pixel_values", {0: "batch", 1: "num_channels", 2: "height", 3: "width"}),
("pixel_mask", {0: "batch"}),
]
)
@property
def atol_for_validation(self) -> float:
return 1e-5
@property
def default_onnx_opset(self) -> int:
return 12
| 12,973 | 46.350365 | 119 | py |
transformers | transformers-main/src/transformers/models/conditional_detr/convert_conditional_detr_original_pytorch_checkpoint_to_pytorch.py | # coding=utf-8
# Copyright 2022 The HuggingFace Inc. team.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
"""Convert Conditional DETR checkpoints."""
import argparse
import json
from collections import OrderedDict
from pathlib import Path
import requests
import torch
from huggingface_hub import hf_hub_download
from PIL import Image
from transformers import (
ConditionalDetrConfig,
ConditionalDetrForObjectDetection,
ConditionalDetrForSegmentation,
ConditionalDetrImageProcessor,
)
from transformers.utils import logging
logging.set_verbosity_info()
logger = logging.get_logger(__name__)
# here we list all keys to be renamed (original name on the left, our name on the right)
rename_keys = []
for i in range(6):
# encoder layers: output projection, 2 feedforward neural networks and 2 layernorms
rename_keys.append(
(f"transformer.encoder.layers.{i}.self_attn.out_proj.weight", f"encoder.layers.{i}.self_attn.out_proj.weight")
)
rename_keys.append(
(f"transformer.encoder.layers.{i}.self_attn.out_proj.bias", f"encoder.layers.{i}.self_attn.out_proj.bias")
)
rename_keys.append((f"transformer.encoder.layers.{i}.linear1.weight", f"encoder.layers.{i}.fc1.weight"))
rename_keys.append((f"transformer.encoder.layers.{i}.linear1.bias", f"encoder.layers.{i}.fc1.bias"))
rename_keys.append((f"transformer.encoder.layers.{i}.linear2.weight", f"encoder.layers.{i}.fc2.weight"))
rename_keys.append((f"transformer.encoder.layers.{i}.linear2.bias", f"encoder.layers.{i}.fc2.bias"))
rename_keys.append(
(f"transformer.encoder.layers.{i}.norm1.weight", f"encoder.layers.{i}.self_attn_layer_norm.weight")
)
rename_keys.append((f"transformer.encoder.layers.{i}.norm1.bias", f"encoder.layers.{i}.self_attn_layer_norm.bias"))
rename_keys.append((f"transformer.encoder.layers.{i}.norm2.weight", f"encoder.layers.{i}.final_layer_norm.weight"))
rename_keys.append((f"transformer.encoder.layers.{i}.norm2.bias", f"encoder.layers.{i}.final_layer_norm.bias"))
# decoder layers: 2 times output projection, 2 feedforward neural networks and 3 layernorms
rename_keys.append(
(f"transformer.decoder.layers.{i}.self_attn.out_proj.weight", f"decoder.layers.{i}.self_attn.out_proj.weight")
)
rename_keys.append(
(f"transformer.decoder.layers.{i}.self_attn.out_proj.bias", f"decoder.layers.{i}.self_attn.out_proj.bias")
)
rename_keys.append(
(
f"transformer.decoder.layers.{i}.cross_attn.out_proj.weight",
f"decoder.layers.{i}.encoder_attn.out_proj.weight",
)
)
rename_keys.append(
(
f"transformer.decoder.layers.{i}.cross_attn.out_proj.bias",
f"decoder.layers.{i}.encoder_attn.out_proj.bias",
)
)
rename_keys.append((f"transformer.decoder.layers.{i}.linear1.weight", f"decoder.layers.{i}.fc1.weight"))
rename_keys.append((f"transformer.decoder.layers.{i}.linear1.bias", f"decoder.layers.{i}.fc1.bias"))
rename_keys.append((f"transformer.decoder.layers.{i}.linear2.weight", f"decoder.layers.{i}.fc2.weight"))
rename_keys.append((f"transformer.decoder.layers.{i}.linear2.bias", f"decoder.layers.{i}.fc2.bias"))
rename_keys.append(
(f"transformer.decoder.layers.{i}.norm1.weight", f"decoder.layers.{i}.self_attn_layer_norm.weight")
)
rename_keys.append((f"transformer.decoder.layers.{i}.norm1.bias", f"decoder.layers.{i}.self_attn_layer_norm.bias"))
rename_keys.append(
(f"transformer.decoder.layers.{i}.norm2.weight", f"decoder.layers.{i}.encoder_attn_layer_norm.weight")
)
rename_keys.append(
(f"transformer.decoder.layers.{i}.norm2.bias", f"decoder.layers.{i}.encoder_attn_layer_norm.bias")
)
rename_keys.append((f"transformer.decoder.layers.{i}.norm3.weight", f"decoder.layers.{i}.final_layer_norm.weight"))
rename_keys.append((f"transformer.decoder.layers.{i}.norm3.bias", f"decoder.layers.{i}.final_layer_norm.bias"))
# q, k, v projections in self/cross-attention in decoder for conditional DETR
rename_keys.append(
(f"transformer.decoder.layers.{i}.sa_qcontent_proj.weight", f"decoder.layers.{i}.sa_qcontent_proj.weight")
)
rename_keys.append(
(f"transformer.decoder.layers.{i}.sa_kcontent_proj.weight", f"decoder.layers.{i}.sa_kcontent_proj.weight")
)
rename_keys.append(
(f"transformer.decoder.layers.{i}.sa_qpos_proj.weight", f"decoder.layers.{i}.sa_qpos_proj.weight")
)
rename_keys.append(
(f"transformer.decoder.layers.{i}.sa_kpos_proj.weight", f"decoder.layers.{i}.sa_kpos_proj.weight")
)
rename_keys.append((f"transformer.decoder.layers.{i}.sa_v_proj.weight", f"decoder.layers.{i}.sa_v_proj.weight"))
rename_keys.append(
(f"transformer.decoder.layers.{i}.ca_qcontent_proj.weight", f"decoder.layers.{i}.ca_qcontent_proj.weight")
)
# rename_keys.append((f"transformer.decoder.layers.{i}.ca_qpos_proj.weight", f"decoder.layers.{i}.ca_qpos_proj.weight"))
rename_keys.append(
(f"transformer.decoder.layers.{i}.ca_kcontent_proj.weight", f"decoder.layers.{i}.ca_kcontent_proj.weight")
)
rename_keys.append(
(f"transformer.decoder.layers.{i}.ca_kpos_proj.weight", f"decoder.layers.{i}.ca_kpos_proj.weight")
)
rename_keys.append((f"transformer.decoder.layers.{i}.ca_v_proj.weight", f"decoder.layers.{i}.ca_v_proj.weight"))
rename_keys.append(
(f"transformer.decoder.layers.{i}.ca_qpos_sine_proj.weight", f"decoder.layers.{i}.ca_qpos_sine_proj.weight")
)
rename_keys.append(
(f"transformer.decoder.layers.{i}.sa_qcontent_proj.bias", f"decoder.layers.{i}.sa_qcontent_proj.bias")
)
rename_keys.append(
(f"transformer.decoder.layers.{i}.sa_kcontent_proj.bias", f"decoder.layers.{i}.sa_kcontent_proj.bias")
)
rename_keys.append((f"transformer.decoder.layers.{i}.sa_qpos_proj.bias", f"decoder.layers.{i}.sa_qpos_proj.bias"))
rename_keys.append((f"transformer.decoder.layers.{i}.sa_kpos_proj.bias", f"decoder.layers.{i}.sa_kpos_proj.bias"))
rename_keys.append((f"transformer.decoder.layers.{i}.sa_v_proj.bias", f"decoder.layers.{i}.sa_v_proj.bias"))
rename_keys.append(
(f"transformer.decoder.layers.{i}.ca_qcontent_proj.bias", f"decoder.layers.{i}.ca_qcontent_proj.bias")
)
# rename_keys.append((f"transformer.decoder.layers.{i}.ca_qpos_proj.bias", f"decoder.layers.{i}.ca_qpos_proj.bias"))
rename_keys.append(
(f"transformer.decoder.layers.{i}.ca_kcontent_proj.bias", f"decoder.layers.{i}.ca_kcontent_proj.bias")
)
rename_keys.append((f"transformer.decoder.layers.{i}.ca_kpos_proj.bias", f"decoder.layers.{i}.ca_kpos_proj.bias"))
rename_keys.append((f"transformer.decoder.layers.{i}.ca_v_proj.bias", f"decoder.layers.{i}.ca_v_proj.bias"))
rename_keys.append(
(f"transformer.decoder.layers.{i}.ca_qpos_sine_proj.bias", f"decoder.layers.{i}.ca_qpos_sine_proj.bias")
)
# convolutional projection + query embeddings + layernorm of decoder + class and bounding box heads
# for conditional DETR, also convert reference point head and query scale MLP
rename_keys.extend(
[
("input_proj.weight", "input_projection.weight"),
("input_proj.bias", "input_projection.bias"),
("query_embed.weight", "query_position_embeddings.weight"),
("transformer.decoder.norm.weight", "decoder.layernorm.weight"),
("transformer.decoder.norm.bias", "decoder.layernorm.bias"),
("class_embed.weight", "class_labels_classifier.weight"),
("class_embed.bias", "class_labels_classifier.bias"),
("bbox_embed.layers.0.weight", "bbox_predictor.layers.0.weight"),
("bbox_embed.layers.0.bias", "bbox_predictor.layers.0.bias"),
("bbox_embed.layers.1.weight", "bbox_predictor.layers.1.weight"),
("bbox_embed.layers.1.bias", "bbox_predictor.layers.1.bias"),
("bbox_embed.layers.2.weight", "bbox_predictor.layers.2.weight"),
("bbox_embed.layers.2.bias", "bbox_predictor.layers.2.bias"),
("transformer.decoder.ref_point_head.layers.0.weight", "decoder.ref_point_head.layers.0.weight"),
("transformer.decoder.ref_point_head.layers.0.bias", "decoder.ref_point_head.layers.0.bias"),
("transformer.decoder.ref_point_head.layers.1.weight", "decoder.ref_point_head.layers.1.weight"),
("transformer.decoder.ref_point_head.layers.1.bias", "decoder.ref_point_head.layers.1.bias"),
("transformer.decoder.query_scale.layers.0.weight", "decoder.query_scale.layers.0.weight"),
("transformer.decoder.query_scale.layers.0.bias", "decoder.query_scale.layers.0.bias"),
("transformer.decoder.query_scale.layers.1.weight", "decoder.query_scale.layers.1.weight"),
("transformer.decoder.query_scale.layers.1.bias", "decoder.query_scale.layers.1.bias"),
("transformer.decoder.layers.0.ca_qpos_proj.weight", "decoder.layers.0.ca_qpos_proj.weight"),
("transformer.decoder.layers.0.ca_qpos_proj.bias", "decoder.layers.0.ca_qpos_proj.bias"),
]
)
def rename_key(state_dict, old, new):
val = state_dict.pop(old)
state_dict[new] = val
def rename_backbone_keys(state_dict):
new_state_dict = OrderedDict()
for key, value in state_dict.items():
if "backbone.0.body" in key:
new_key = key.replace("backbone.0.body", "backbone.conv_encoder.model")
new_state_dict[new_key] = value
else:
new_state_dict[key] = value
return new_state_dict
def read_in_q_k_v(state_dict, is_panoptic=False):
prefix = ""
if is_panoptic:
prefix = "conditional_detr."
# first: transformer encoder
for i in range(6):
# read in weights + bias of input projection layer (in PyTorch's MultiHeadAttention, this is a single matrix + bias)
in_proj_weight = state_dict.pop(f"{prefix}transformer.encoder.layers.{i}.self_attn.in_proj_weight")
in_proj_bias = state_dict.pop(f"{prefix}transformer.encoder.layers.{i}.self_attn.in_proj_bias")
# next, add query, keys and values (in that order) to the state dict
state_dict[f"encoder.layers.{i}.self_attn.q_proj.weight"] = in_proj_weight[:256, :]
state_dict[f"encoder.layers.{i}.self_attn.q_proj.bias"] = in_proj_bias[:256]
state_dict[f"encoder.layers.{i}.self_attn.k_proj.weight"] = in_proj_weight[256:512, :]
state_dict[f"encoder.layers.{i}.self_attn.k_proj.bias"] = in_proj_bias[256:512]
state_dict[f"encoder.layers.{i}.self_attn.v_proj.weight"] = in_proj_weight[-256:, :]
state_dict[f"encoder.layers.{i}.self_attn.v_proj.bias"] = in_proj_bias[-256:]
# We will verify our results on an image of cute cats
def prepare_img():
url = "http://images.cocodataset.org/val2017/000000039769.jpg"
im = Image.open(requests.get(url, stream=True).raw)
return im
@torch.no_grad()
def convert_conditional_detr_checkpoint(model_name, pytorch_dump_folder_path):
"""
Copy/paste/tweak model's weights to our CONDITIONAL_DETR structure.
"""
# load default config
config = ConditionalDetrConfig()
# set backbone and dilation attributes
if "resnet101" in model_name:
config.backbone = "resnet101"
if "dc5" in model_name:
config.dilation = True
is_panoptic = "panoptic" in model_name
if is_panoptic:
config.num_labels = 250
else:
config.num_labels = 91
repo_id = "huggingface/label-files"
filename = "coco-detection-id2label.json"
id2label = json.load(open(hf_hub_download(repo_id, filename, repo_type="dataset"), "r"))
id2label = {int(k): v for k, v in id2label.items()}
config.id2label = id2label
config.label2id = {v: k for k, v in id2label.items()}
# load image processor
format = "coco_panoptic" if is_panoptic else "coco_detection"
image_processor = ConditionalDetrImageProcessor(format=format)
# prepare image
img = prepare_img()
encoding = image_processor(images=img, return_tensors="pt")
pixel_values = encoding["pixel_values"]
logger.info(f"Converting model {model_name}...")
# load original model from torch hub
conditional_detr = torch.hub.load("DeppMeng/ConditionalDETR", model_name, pretrained=True).eval()
state_dict = conditional_detr.state_dict()
# rename keys
for src, dest in rename_keys:
if is_panoptic:
src = "conditional_detr." + src
rename_key(state_dict, src, dest)
state_dict = rename_backbone_keys(state_dict)
# query, key and value matrices need special treatment
read_in_q_k_v(state_dict, is_panoptic=is_panoptic)
# important: we need to prepend a prefix to each of the base model keys as the head models use different attributes for them
prefix = "conditional_detr.model." if is_panoptic else "model."
for key in state_dict.copy().keys():
if is_panoptic:
if (
key.startswith("conditional_detr")
and not key.startswith("class_labels_classifier")
and not key.startswith("bbox_predictor")
):
val = state_dict.pop(key)
state_dict["conditional_detr.model" + key[4:]] = val
elif "class_labels_classifier" in key or "bbox_predictor" in key:
val = state_dict.pop(key)
state_dict["conditional_detr." + key] = val
elif key.startswith("bbox_attention") or key.startswith("mask_head"):
continue
else:
val = state_dict.pop(key)
state_dict[prefix + key] = val
else:
if not key.startswith("class_labels_classifier") and not key.startswith("bbox_predictor"):
val = state_dict.pop(key)
state_dict[prefix + key] = val
# finally, create HuggingFace model and load state dict
model = ConditionalDetrForSegmentation(config) if is_panoptic else ConditionalDetrForObjectDetection(config)
model.load_state_dict(state_dict)
model.eval()
model.push_to_hub(repo_id=model_name, organization="DepuMeng", commit_message="Add model")
# verify our conversion
original_outputs = conditional_detr(pixel_values)
outputs = model(pixel_values)
assert torch.allclose(outputs.logits, original_outputs["pred_logits"], atol=1e-4)
assert torch.allclose(outputs.pred_boxes, original_outputs["pred_boxes"], atol=1e-4)
if is_panoptic:
assert torch.allclose(outputs.pred_masks, original_outputs["pred_masks"], atol=1e-4)
# Save model and image processor
logger.info(f"Saving PyTorch model and image processor to {pytorch_dump_folder_path}...")
Path(pytorch_dump_folder_path).mkdir(exist_ok=True)
model.save_pretrained(pytorch_dump_folder_path)
image_processor.save_pretrained(pytorch_dump_folder_path)
if __name__ == "__main__":
parser = argparse.ArgumentParser()
parser.add_argument(
"--model_name",
default="conditional_detr_resnet50",
type=str,
help="Name of the CONDITIONAL_DETR model you'd like to convert.",
)
parser.add_argument(
"--pytorch_dump_folder_path", default=None, type=str, help="Path to the folder to output PyTorch model."
)
args = parser.parse_args()
convert_conditional_detr_checkpoint(args.model_name, args.pytorch_dump_folder_path)
| 15,930 | 47.868098 | 128 | py |
transformers | transformers-main/src/transformers/models/conditional_detr/modeling_conditional_detr.py | # coding=utf-8
# Copyright 2022 Microsoft Research Asia and The HuggingFace Inc. team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
""" PyTorch Conditional DETR model."""
import math
from dataclasses import dataclass
from typing import Dict, List, Optional, Tuple
import torch
from torch import Tensor, nn
from ...activations import ACT2FN
from ...modeling_outputs import BaseModelOutput, BaseModelOutputWithCrossAttentions, Seq2SeqModelOutput
from ...modeling_utils import PreTrainedModel
from ...utils import (
ModelOutput,
add_start_docstrings,
add_start_docstrings_to_model_forward,
is_scipy_available,
is_timm_available,
is_vision_available,
logging,
replace_return_docstrings,
requires_backends,
)
from ..auto import AutoBackbone
from .configuration_conditional_detr import ConditionalDetrConfig
if is_scipy_available():
from scipy.optimize import linear_sum_assignment
if is_timm_available():
from timm import create_model
if is_vision_available():
from ...image_transforms import center_to_corners_format
logger = logging.get_logger(__name__)
_CONFIG_FOR_DOC = "ConditionalDetrConfig"
_CHECKPOINT_FOR_DOC = "microsoft/conditional-detr-resnet-50"
CONDITIONAL_DETR_PRETRAINED_MODEL_ARCHIVE_LIST = [
"microsoft/conditional-detr-resnet-50",
# See all Conditional DETR models at https://huggingface.co/models?filter=conditional_detr
]
@dataclass
class ConditionalDetrDecoderOutput(BaseModelOutputWithCrossAttentions):
"""
Base class for outputs of the Conditional DETR decoder. This class adds one attribute to
BaseModelOutputWithCrossAttentions, namely an optional stack of intermediate decoder activations, i.e. the output
of each decoder layer, each of them gone through a layernorm. This is useful when training the model with auxiliary
decoding losses.
Args:
last_hidden_state (`torch.FloatTensor` of shape `(batch_size, sequence_length, hidden_size)`):
Sequence of hidden-states at the output of the last layer of the model.
hidden_states (`tuple(torch.FloatTensor)`, *optional*, returned when `output_hidden_states=True` is passed or when `config.output_hidden_states=True`):
Tuple of `torch.FloatTensor` (one for the output of the embeddings + one for the output of each layer) of
shape `(batch_size, sequence_length, hidden_size)`. Hidden-states of the model at the output of each layer
plus the initial embedding outputs.
attentions (`tuple(torch.FloatTensor)`, *optional*, returned when `output_attentions=True` is passed or when `config.output_attentions=True`):
Tuple of `torch.FloatTensor` (one for each layer) of shape `(batch_size, num_heads, sequence_length,
sequence_length)`. Attentions weights after the attention softmax, used to compute the weighted average in
the self-attention heads.
cross_attentions (`tuple(torch.FloatTensor)`, *optional*, returned when `output_attentions=True` and `config.add_cross_attention=True` is passed or when `config.output_attentions=True`):
Tuple of `torch.FloatTensor` (one for each layer) of shape `(batch_size, num_heads, sequence_length,
sequence_length)`. Attentions weights of the decoder's cross-attention layer, after the attention softmax,
used to compute the weighted average in the cross-attention heads.
intermediate_hidden_states (`torch.FloatTensor` of shape `(config.decoder_layers, batch_size, num_queries, hidden_size)`, *optional*, returned when `config.auxiliary_loss=True`):
Intermediate decoder activations, i.e. the output of each decoder layer, each of them gone through a
layernorm.
"""
intermediate_hidden_states: Optional[torch.FloatTensor] = None
reference_points: Optional[Tuple[torch.FloatTensor]] = None
@dataclass
class ConditionalDetrModelOutput(Seq2SeqModelOutput):
"""
Base class for outputs of the Conditional DETR encoder-decoder model. This class adds one attribute to
Seq2SeqModelOutput, namely an optional stack of intermediate decoder activations, i.e. the output of each decoder
layer, each of them gone through a layernorm. This is useful when training the model with auxiliary decoding
losses.
Args:
last_hidden_state (`torch.FloatTensor` of shape `(batch_size, sequence_length, hidden_size)`):
Sequence of hidden-states at the output of the last layer of the decoder of the model.
decoder_hidden_states (`tuple(torch.FloatTensor)`, *optional*, returned when `output_hidden_states=True` is passed or when `config.output_hidden_states=True`):
Tuple of `torch.FloatTensor` (one for the output of the embeddings + one for the output of each layer) of
shape `(batch_size, sequence_length, hidden_size)`. Hidden-states of the decoder at the output of each
layer plus the initial embedding outputs.
decoder_attentions (`tuple(torch.FloatTensor)`, *optional*, returned when `output_attentions=True` is passed or when `config.output_attentions=True`):
Tuple of `torch.FloatTensor` (one for each layer) of shape `(batch_size, num_heads, sequence_length,
sequence_length)`. Attentions weights of the decoder, after the attention softmax, used to compute the
weighted average in the self-attention heads.
cross_attentions (`tuple(torch.FloatTensor)`, *optional*, returned when `output_attentions=True` is passed or when `config.output_attentions=True`):
Tuple of `torch.FloatTensor` (one for each layer) of shape `(batch_size, num_heads, sequence_length,
sequence_length)`. Attentions weights of the decoder's cross-attention layer, after the attention softmax,
used to compute the weighted average in the cross-attention heads.
encoder_last_hidden_state (`torch.FloatTensor` of shape `(batch_size, sequence_length, hidden_size)`, *optional*):
Sequence of hidden-states at the output of the last layer of the encoder of the model.
encoder_hidden_states (`tuple(torch.FloatTensor)`, *optional*, returned when `output_hidden_states=True` is passed or when `config.output_hidden_states=True`):
Tuple of `torch.FloatTensor` (one for the output of the embeddings + one for the output of each layer) of
shape `(batch_size, sequence_length, hidden_size)`. Hidden-states of the encoder at the output of each
layer plus the initial embedding outputs.
encoder_attentions (`tuple(torch.FloatTensor)`, *optional*, returned when `output_attentions=True` is passed or when `config.output_attentions=True`):
Tuple of `torch.FloatTensor` (one for each layer) of shape `(batch_size, num_heads, sequence_length,
sequence_length)`. Attentions weights of the encoder, after the attention softmax, used to compute the
weighted average in the self-attention heads.
intermediate_hidden_states (`torch.FloatTensor` of shape `(config.decoder_layers, batch_size, sequence_length, hidden_size)`, *optional*, returned when `config.auxiliary_loss=True`):
Intermediate decoder activations, i.e. the output of each decoder layer, each of them gone through a
layernorm.
"""
intermediate_hidden_states: Optional[torch.FloatTensor] = None
reference_points: Optional[Tuple[torch.FloatTensor]] = None
@dataclass
# Copied from transformers.models.detr.modeling_detr.DetrObjectDetectionOutput with Detr->ConditionalDetr
class ConditionalDetrObjectDetectionOutput(ModelOutput):
"""
Output type of [`ConditionalDetrForObjectDetection`].
Args:
loss (`torch.FloatTensor` of shape `(1,)`, *optional*, returned when `labels` are provided)):
Total loss as a linear combination of a negative log-likehood (cross-entropy) for class prediction and a
bounding box loss. The latter is defined as a linear combination of the L1 loss and the generalized
scale-invariant IoU loss.
loss_dict (`Dict`, *optional*):
A dictionary containing the individual losses. Useful for logging.
logits (`torch.FloatTensor` of shape `(batch_size, num_queries, num_classes + 1)`):
Classification logits (including no-object) for all queries.
pred_boxes (`torch.FloatTensor` of shape `(batch_size, num_queries, 4)`):
Normalized boxes coordinates for all queries, represented as (center_x, center_y, width, height). These
values are normalized in [0, 1], relative to the size of each individual image in the batch (disregarding
possible padding). You can use [`~ConditionalDetrImageProcessor.post_process_object_detection`] to retrieve
the unnormalized bounding boxes.
auxiliary_outputs (`list[Dict]`, *optional*):
Optional, only returned when auxilary losses are activated (i.e. `config.auxiliary_loss` is set to `True`)
and labels are provided. It is a list of dictionaries containing the two above keys (`logits` and
`pred_boxes`) for each decoder layer.
last_hidden_state (`torch.FloatTensor` of shape `(batch_size, sequence_length, hidden_size)`, *optional*):
Sequence of hidden-states at the output of the last layer of the decoder of the model.
decoder_hidden_states (`tuple(torch.FloatTensor)`, *optional*, returned when `output_hidden_states=True` is passed or when `config.output_hidden_states=True`):
Tuple of `torch.FloatTensor` (one for the output of the embeddings + one for the output of each layer) of
shape `(batch_size, sequence_length, hidden_size)`. Hidden-states of the decoder at the output of each
layer plus the initial embedding outputs.
decoder_attentions (`tuple(torch.FloatTensor)`, *optional*, returned when `output_attentions=True` is passed or when `config.output_attentions=True`):
Tuple of `torch.FloatTensor` (one for each layer) of shape `(batch_size, num_heads, sequence_length,
sequence_length)`. Attentions weights of the decoder, after the attention softmax, used to compute the
weighted average in the self-attention heads.
cross_attentions (`tuple(torch.FloatTensor)`, *optional*, returned when `output_attentions=True` is passed or when `config.output_attentions=True`):
Tuple of `torch.FloatTensor` (one for each layer) of shape `(batch_size, num_heads, sequence_length,
sequence_length)`. Attentions weights of the decoder's cross-attention layer, after the attention softmax,
used to compute the weighted average in the cross-attention heads.
encoder_last_hidden_state (`torch.FloatTensor` of shape `(batch_size, sequence_length, hidden_size)`, *optional*):
Sequence of hidden-states at the output of the last layer of the encoder of the model.
encoder_hidden_states (`tuple(torch.FloatTensor)`, *optional*, returned when `output_hidden_states=True` is passed or when `config.output_hidden_states=True`):
Tuple of `torch.FloatTensor` (one for the output of the embeddings + one for the output of each layer) of
shape `(batch_size, sequence_length, hidden_size)`. Hidden-states of the encoder at the output of each
layer plus the initial embedding outputs.
encoder_attentions (`tuple(torch.FloatTensor)`, *optional*, returned when `output_attentions=True` is passed or when `config.output_attentions=True`):
Tuple of `torch.FloatTensor` (one for each layer) of shape `(batch_size, num_heads, sequence_length,
sequence_length)`. Attentions weights of the encoder, after the attention softmax, used to compute the
weighted average in the self-attention heads.
"""
loss: Optional[torch.FloatTensor] = None
loss_dict: Optional[Dict] = None
logits: torch.FloatTensor = None
pred_boxes: torch.FloatTensor = None
auxiliary_outputs: Optional[List[Dict]] = None
last_hidden_state: Optional[torch.FloatTensor] = None
decoder_hidden_states: Optional[Tuple[torch.FloatTensor]] = None
decoder_attentions: Optional[Tuple[torch.FloatTensor]] = None
cross_attentions: Optional[Tuple[torch.FloatTensor]] = None
encoder_last_hidden_state: Optional[torch.FloatTensor] = None
encoder_hidden_states: Optional[Tuple[torch.FloatTensor]] = None
encoder_attentions: Optional[Tuple[torch.FloatTensor]] = None
@dataclass
# Copied from transformers.models.detr.modeling_detr.DetrSegmentationOutput with Detr->ConditionalDetr
class ConditionalDetrSegmentationOutput(ModelOutput):
"""
Output type of [`ConditionalDetrForSegmentation`].
Args:
loss (`torch.FloatTensor` of shape `(1,)`, *optional*, returned when `labels` are provided)):
Total loss as a linear combination of a negative log-likehood (cross-entropy) for class prediction and a
bounding box loss. The latter is defined as a linear combination of the L1 loss and the generalized
scale-invariant IoU loss.
loss_dict (`Dict`, *optional*):
A dictionary containing the individual losses. Useful for logging.
logits (`torch.FloatTensor` of shape `(batch_size, num_queries, num_classes + 1)`):
Classification logits (including no-object) for all queries.
pred_boxes (`torch.FloatTensor` of shape `(batch_size, num_queries, 4)`):
Normalized boxes coordinates for all queries, represented as (center_x, center_y, width, height). These
values are normalized in [0, 1], relative to the size of each individual image in the batch (disregarding
possible padding). You can use [`~ConditionalDetrImageProcessor.post_process_object_detection`] to retrieve
the unnormalized bounding boxes.
pred_masks (`torch.FloatTensor` of shape `(batch_size, num_queries, height/4, width/4)`):
Segmentation masks logits for all queries. See also
[`~ConditionalDetrImageProcessor.post_process_semantic_segmentation`] or
[`~ConditionalDetrImageProcessor.post_process_instance_segmentation`]
[`~ConditionalDetrImageProcessor.post_process_panoptic_segmentation`] to evaluate semantic, instance and
panoptic segmentation masks respectively.
auxiliary_outputs (`list[Dict]`, *optional*):
Optional, only returned when auxiliary losses are activated (i.e. `config.auxiliary_loss` is set to `True`)
and labels are provided. It is a list of dictionaries containing the two above keys (`logits` and
`pred_boxes`) for each decoder layer.
last_hidden_state (`torch.FloatTensor` of shape `(batch_size, sequence_length, hidden_size)`, *optional*):
Sequence of hidden-states at the output of the last layer of the decoder of the model.
decoder_hidden_states (`tuple(torch.FloatTensor)`, *optional*, returned when `output_hidden_states=True` is passed or when `config.output_hidden_states=True`):
Tuple of `torch.FloatTensor` (one for the output of the embeddings + one for the output of each layer) of
shape `(batch_size, sequence_length, hidden_size)`. Hidden-states of the decoder at the output of each
layer plus the initial embedding outputs.
decoder_attentions (`tuple(torch.FloatTensor)`, *optional*, returned when `output_attentions=True` is passed or when `config.output_attentions=True`):
Tuple of `torch.FloatTensor` (one for each layer) of shape `(batch_size, num_heads, sequence_length,
sequence_length)`. Attentions weights of the decoder, after the attention softmax, used to compute the
weighted average in the self-attention heads.
cross_attentions (`tuple(torch.FloatTensor)`, *optional*, returned when `output_attentions=True` is passed or when `config.output_attentions=True`):
Tuple of `torch.FloatTensor` (one for each layer) of shape `(batch_size, num_heads, sequence_length,
sequence_length)`. Attentions weights of the decoder's cross-attention layer, after the attention softmax,
used to compute the weighted average in the cross-attention heads.
encoder_last_hidden_state (`torch.FloatTensor` of shape `(batch_size, sequence_length, hidden_size)`, *optional*):
Sequence of hidden-states at the output of the last layer of the encoder of the model.
encoder_hidden_states (`tuple(torch.FloatTensor)`, *optional*, returned when `output_hidden_states=True` is passed or when `config.output_hidden_states=True`):
Tuple of `torch.FloatTensor` (one for the output of the embeddings + one for the output of each layer) of
shape `(batch_size, sequence_length, hidden_size)`. Hidden-states of the encoder at the output of each
layer plus the initial embedding outputs.
encoder_attentions (`tuple(torch.FloatTensor)`, *optional*, returned when `output_attentions=True` is passed or when `config.output_attentions=True`):
Tuple of `torch.FloatTensor` (one for each layer) of shape `(batch_size, num_heads, sequence_length,
sequence_length)`. Attentions weights of the encoder, after the attention softmax, used to compute the
weighted average in the self-attention heads.
"""
loss: Optional[torch.FloatTensor] = None
loss_dict: Optional[Dict] = None
logits: torch.FloatTensor = None
pred_boxes: torch.FloatTensor = None
pred_masks: torch.FloatTensor = None
auxiliary_outputs: Optional[List[Dict]] = None
last_hidden_state: Optional[torch.FloatTensor] = None
decoder_hidden_states: Optional[Tuple[torch.FloatTensor]] = None
decoder_attentions: Optional[Tuple[torch.FloatTensor]] = None
cross_attentions: Optional[Tuple[torch.FloatTensor]] = None
encoder_last_hidden_state: Optional[torch.FloatTensor] = None
encoder_hidden_states: Optional[Tuple[torch.FloatTensor]] = None
encoder_attentions: Optional[Tuple[torch.FloatTensor]] = None
# Copied from transformers.models.detr.modeling_detr.DetrFrozenBatchNorm2d with Detr->ConditionalDetr
class ConditionalDetrFrozenBatchNorm2d(nn.Module):
"""
BatchNorm2d where the batch statistics and the affine parameters are fixed.
Copy-paste from torchvision.misc.ops with added eps before rqsrt, without which any other models than
torchvision.models.resnet[18,34,50,101] produce nans.
"""
def __init__(self, n):
super().__init__()
self.register_buffer("weight", torch.ones(n))
self.register_buffer("bias", torch.zeros(n))
self.register_buffer("running_mean", torch.zeros(n))
self.register_buffer("running_var", torch.ones(n))
def _load_from_state_dict(
self, state_dict, prefix, local_metadata, strict, missing_keys, unexpected_keys, error_msgs
):
num_batches_tracked_key = prefix + "num_batches_tracked"
if num_batches_tracked_key in state_dict:
del state_dict[num_batches_tracked_key]
super()._load_from_state_dict(
state_dict, prefix, local_metadata, strict, missing_keys, unexpected_keys, error_msgs
)
def forward(self, x):
# move reshapes to the beginning
# to make it user-friendly
weight = self.weight.reshape(1, -1, 1, 1)
bias = self.bias.reshape(1, -1, 1, 1)
running_var = self.running_var.reshape(1, -1, 1, 1)
running_mean = self.running_mean.reshape(1, -1, 1, 1)
epsilon = 1e-5
scale = weight * (running_var + epsilon).rsqrt()
bias = bias - running_mean * scale
return x * scale + bias
# Copied from transformers.models.detr.modeling_detr.replace_batch_norm with Detr->ConditionalDetr
def replace_batch_norm(m, name=""):
for attr_str in dir(m):
target_attr = getattr(m, attr_str)
if isinstance(target_attr, nn.BatchNorm2d):
frozen = ConditionalDetrFrozenBatchNorm2d(target_attr.num_features)
bn = getattr(m, attr_str)
frozen.weight.data.copy_(bn.weight)
frozen.bias.data.copy_(bn.bias)
frozen.running_mean.data.copy_(bn.running_mean)
frozen.running_var.data.copy_(bn.running_var)
setattr(m, attr_str, frozen)
for n, ch in m.named_children():
replace_batch_norm(ch, n)
# Copied from transformers.models.detr.modeling_detr.DetrConvEncoder
class ConditionalDetrConvEncoder(nn.Module):
"""
Convolutional backbone, using either the AutoBackbone API or one from the timm library.
nn.BatchNorm2d layers are replaced by DetrFrozenBatchNorm2d as defined above.
"""
def __init__(self, config):
super().__init__()
self.config = config
if config.use_timm_backbone:
requires_backends(self, ["timm"])
kwargs = {}
if config.dilation:
kwargs["output_stride"] = 16
backbone = create_model(
config.backbone,
pretrained=config.use_pretrained_backbone,
features_only=True,
out_indices=(1, 2, 3, 4),
in_chans=config.num_channels,
**kwargs,
)
else:
backbone = AutoBackbone.from_config(config.backbone_config)
# replace batch norm by frozen batch norm
with torch.no_grad():
replace_batch_norm(backbone)
self.model = backbone
self.intermediate_channel_sizes = (
self.model.feature_info.channels() if config.use_timm_backbone else self.model.channels
)
backbone_model_type = config.backbone if config.use_timm_backbone else config.backbone_config.model_type
if "resnet" in backbone_model_type:
for name, parameter in self.model.named_parameters():
if config.use_timm_backbone:
if "layer2" not in name and "layer3" not in name and "layer4" not in name:
parameter.requires_grad_(False)
else:
if "stage.1" not in name and "stage.2" not in name and "stage.3" not in name:
parameter.requires_grad_(False)
def forward(self, pixel_values: torch.Tensor, pixel_mask: torch.Tensor):
# send pixel_values through the model to get list of feature maps
features = self.model(pixel_values) if self.config.use_timm_backbone else self.model(pixel_values).feature_maps
out = []
for feature_map in features:
# downsample pixel_mask to match shape of corresponding feature_map
mask = nn.functional.interpolate(pixel_mask[None].float(), size=feature_map.shape[-2:]).to(torch.bool)[0]
out.append((feature_map, mask))
return out
# Copied from transformers.models.detr.modeling_detr.DetrConvModel with Detr->ConditionalDetr
class ConditionalDetrConvModel(nn.Module):
"""
This module adds 2D position embeddings to all intermediate feature maps of the convolutional encoder.
"""
def __init__(self, conv_encoder, position_embedding):
super().__init__()
self.conv_encoder = conv_encoder
self.position_embedding = position_embedding
def forward(self, pixel_values, pixel_mask):
# send pixel_values and pixel_mask through backbone to get list of (feature_map, pixel_mask) tuples
out = self.conv_encoder(pixel_values, pixel_mask)
pos = []
for feature_map, mask in out:
# position encoding
pos.append(self.position_embedding(feature_map, mask).to(feature_map.dtype))
return out, pos
# Copied from transformers.models.detr.modeling_detr._expand_mask with Detr->ConditionalDetr
def _expand_mask(mask: torch.Tensor, dtype: torch.dtype, target_len: Optional[int] = None):
"""
Expands attention_mask from `[batch_size, seq_len]` to `[batch_size, 1, target_seq_len, source_seq_len]`.
"""
batch_size, source_len = mask.size()
target_len = target_len if target_len is not None else source_len
expanded_mask = mask[:, None, None, :].expand(batch_size, 1, target_len, source_len).to(dtype)
inverted_mask = 1.0 - expanded_mask
return inverted_mask.masked_fill(inverted_mask.bool(), torch.finfo(dtype).min)
# Copied from transformers.models.detr.modeling_detr.DetrSinePositionEmbedding with Detr->ConditionalDetr
class ConditionalDetrSinePositionEmbedding(nn.Module):
"""
This is a more standard version of the position embedding, very similar to the one used by the Attention is all you
need paper, generalized to work on images.
"""
def __init__(self, embedding_dim=64, temperature=10000, normalize=False, scale=None):
super().__init__()
self.embedding_dim = embedding_dim
self.temperature = temperature
self.normalize = normalize
if scale is not None and normalize is False:
raise ValueError("normalize should be True if scale is passed")
if scale is None:
scale = 2 * math.pi
self.scale = scale
def forward(self, pixel_values, pixel_mask):
if pixel_mask is None:
raise ValueError("No pixel mask provided")
y_embed = pixel_mask.cumsum(1, dtype=torch.float32)
x_embed = pixel_mask.cumsum(2, dtype=torch.float32)
if self.normalize:
y_embed = y_embed / (y_embed[:, -1:, :] + 1e-6) * self.scale
x_embed = x_embed / (x_embed[:, :, -1:] + 1e-6) * self.scale
dim_t = torch.arange(self.embedding_dim, dtype=torch.float32, device=pixel_values.device)
dim_t = self.temperature ** (2 * torch.div(dim_t, 2, rounding_mode="floor") / self.embedding_dim)
pos_x = x_embed[:, :, :, None] / dim_t
pos_y = y_embed[:, :, :, None] / dim_t
pos_x = torch.stack((pos_x[:, :, :, 0::2].sin(), pos_x[:, :, :, 1::2].cos()), dim=4).flatten(3)
pos_y = torch.stack((pos_y[:, :, :, 0::2].sin(), pos_y[:, :, :, 1::2].cos()), dim=4).flatten(3)
pos = torch.cat((pos_y, pos_x), dim=3).permute(0, 3, 1, 2)
return pos
# Copied from transformers.models.detr.modeling_detr.DetrLearnedPositionEmbedding with Detr->ConditionalDetr
class ConditionalDetrLearnedPositionEmbedding(nn.Module):
"""
This module learns positional embeddings up to a fixed maximum size.
"""
def __init__(self, embedding_dim=256):
super().__init__()
self.row_embeddings = nn.Embedding(50, embedding_dim)
self.column_embeddings = nn.Embedding(50, embedding_dim)
def forward(self, pixel_values, pixel_mask=None):
height, width = pixel_values.shape[-2:]
width_values = torch.arange(width, device=pixel_values.device)
height_values = torch.arange(height, device=pixel_values.device)
x_emb = self.column_embeddings(width_values)
y_emb = self.row_embeddings(height_values)
pos = torch.cat([x_emb.unsqueeze(0).repeat(height, 1, 1), y_emb.unsqueeze(1).repeat(1, width, 1)], dim=-1)
pos = pos.permute(2, 0, 1)
pos = pos.unsqueeze(0)
pos = pos.repeat(pixel_values.shape[0], 1, 1, 1)
return pos
# Copied from transformers.models.detr.modeling_detr.build_position_encoding with Detr->ConditionalDetr
def build_position_encoding(config):
n_steps = config.d_model // 2
if config.position_embedding_type == "sine":
# TODO find a better way of exposing other arguments
position_embedding = ConditionalDetrSinePositionEmbedding(n_steps, normalize=True)
elif config.position_embedding_type == "learned":
position_embedding = ConditionalDetrLearnedPositionEmbedding(n_steps)
else:
raise ValueError(f"Not supported {config.position_embedding_type}")
return position_embedding
# function to generate sine positional embedding for 2d coordinates
def gen_sine_position_embeddings(pos_tensor, d_model):
scale = 2 * math.pi
dim = d_model // 2
dim_t = torch.arange(dim, dtype=torch.float32, device=pos_tensor.device)
dim_t = 10000 ** (2 * torch.div(dim_t, 2, rounding_mode="floor") / dim)
x_embed = pos_tensor[:, :, 0] * scale
y_embed = pos_tensor[:, :, 1] * scale
pos_x = x_embed[:, :, None] / dim_t
pos_y = y_embed[:, :, None] / dim_t
pos_x = torch.stack((pos_x[:, :, 0::2].sin(), pos_x[:, :, 1::2].cos()), dim=3).flatten(2)
pos_y = torch.stack((pos_y[:, :, 0::2].sin(), pos_y[:, :, 1::2].cos()), dim=3).flatten(2)
pos = torch.cat((pos_y, pos_x), dim=2)
return pos
def inverse_sigmoid(x, eps=1e-5):
x = x.clamp(min=0, max=1)
x1 = x.clamp(min=eps)
x2 = (1 - x).clamp(min=eps)
return torch.log(x1 / x2)
# Copied from transformers.models.detr.modeling_detr.DetrAttention
class DetrAttention(nn.Module):
"""
Multi-headed attention from 'Attention Is All You Need' paper.
Here, we add position embeddings to the queries and keys (as explained in the DETR paper).
"""
def __init__(
self,
embed_dim: int,
num_heads: int,
dropout: float = 0.0,
bias: bool = True,
):
super().__init__()
self.embed_dim = embed_dim
self.num_heads = num_heads
self.dropout = dropout
self.head_dim = embed_dim // num_heads
if self.head_dim * num_heads != self.embed_dim:
raise ValueError(
f"embed_dim must be divisible by num_heads (got `embed_dim`: {self.embed_dim} and `num_heads`:"
f" {num_heads})."
)
self.scaling = self.head_dim**-0.5
self.k_proj = nn.Linear(embed_dim, embed_dim, bias=bias)
self.v_proj = nn.Linear(embed_dim, embed_dim, bias=bias)
self.q_proj = nn.Linear(embed_dim, embed_dim, bias=bias)
self.out_proj = nn.Linear(embed_dim, embed_dim, bias=bias)
def _shape(self, tensor: torch.Tensor, seq_len: int, batch_size: int):
return tensor.view(batch_size, seq_len, self.num_heads, self.head_dim).transpose(1, 2).contiguous()
def with_pos_embed(self, tensor: torch.Tensor, position_embeddings: Optional[Tensor]):
return tensor if position_embeddings is None else tensor + position_embeddings
def forward(
self,
hidden_states: torch.Tensor,
attention_mask: Optional[torch.Tensor] = None,
position_embeddings: Optional[torch.Tensor] = None,
key_value_states: Optional[torch.Tensor] = None,
key_value_position_embeddings: Optional[torch.Tensor] = None,
output_attentions: bool = False,
) -> Tuple[torch.Tensor, Optional[torch.Tensor], Optional[Tuple[torch.Tensor]]]:
"""Input shape: Batch x Time x Channel"""
# if key_value_states are provided this layer is used as a cross-attention layer
# for the decoder
is_cross_attention = key_value_states is not None
batch_size, target_len, embed_dim = hidden_states.size()
# add position embeddings to the hidden states before projecting to queries and keys
if position_embeddings is not None:
hidden_states_original = hidden_states
hidden_states = self.with_pos_embed(hidden_states, position_embeddings)
# add key-value position embeddings to the key value states
if key_value_position_embeddings is not None:
key_value_states_original = key_value_states
key_value_states = self.with_pos_embed(key_value_states, key_value_position_embeddings)
# get query proj
query_states = self.q_proj(hidden_states) * self.scaling
# get key, value proj
if is_cross_attention:
# cross_attentions
key_states = self._shape(self.k_proj(key_value_states), -1, batch_size)
value_states = self._shape(self.v_proj(key_value_states_original), -1, batch_size)
else:
# self_attention
key_states = self._shape(self.k_proj(hidden_states), -1, batch_size)
value_states = self._shape(self.v_proj(hidden_states_original), -1, batch_size)
proj_shape = (batch_size * self.num_heads, -1, self.head_dim)
query_states = self._shape(query_states, target_len, batch_size).view(*proj_shape)
key_states = key_states.view(*proj_shape)
value_states = value_states.view(*proj_shape)
source_len = key_states.size(1)
attn_weights = torch.bmm(query_states, key_states.transpose(1, 2))
if attn_weights.size() != (batch_size * self.num_heads, target_len, source_len):
raise ValueError(
f"Attention weights should be of size {(batch_size * self.num_heads, target_len, source_len)}, but is"
f" {attn_weights.size()}"
)
if attention_mask is not None:
if attention_mask.size() != (batch_size, 1, target_len, source_len):
raise ValueError(
f"Attention mask should be of size {(batch_size, 1, target_len, source_len)}, but is"
f" {attention_mask.size()}"
)
attn_weights = attn_weights.view(batch_size, self.num_heads, target_len, source_len) + attention_mask
attn_weights = attn_weights.view(batch_size * self.num_heads, target_len, source_len)
attn_weights = nn.functional.softmax(attn_weights, dim=-1)
if output_attentions:
# this operation is a bit awkward, but it's required to
# make sure that attn_weights keeps its gradient.
# In order to do so, attn_weights have to reshaped
# twice and have to be reused in the following
attn_weights_reshaped = attn_weights.view(batch_size, self.num_heads, target_len, source_len)
attn_weights = attn_weights_reshaped.view(batch_size * self.num_heads, target_len, source_len)
else:
attn_weights_reshaped = None
attn_probs = nn.functional.dropout(attn_weights, p=self.dropout, training=self.training)
attn_output = torch.bmm(attn_probs, value_states)
if attn_output.size() != (batch_size * self.num_heads, target_len, self.head_dim):
raise ValueError(
f"`attn_output` should be of size {(batch_size, self.num_heads, target_len, self.head_dim)}, but is"
f" {attn_output.size()}"
)
attn_output = attn_output.view(batch_size, self.num_heads, target_len, self.head_dim)
attn_output = attn_output.transpose(1, 2)
attn_output = attn_output.reshape(batch_size, target_len, embed_dim)
attn_output = self.out_proj(attn_output)
return attn_output, attn_weights_reshaped
class ConditionalDetrAttention(nn.Module):
"""
Cross-Attention used in Conditional DETR 'Conditional DETR for Fast Training Convergence' paper.
The key q_proj, k_proj, v_proj are defined outside the attention. This attention allows the dim of q, k to be
different to v.
"""
def __init__(
self,
embed_dim: int,
out_dim: int,
num_heads: int,
dropout: float = 0.0,
bias: bool = True,
):
super().__init__()
self.embed_dim = embed_dim
self.out_dim = out_dim
self.num_heads = num_heads
self.dropout = dropout
self.head_dim = embed_dim // num_heads
if self.head_dim * num_heads != self.embed_dim:
raise ValueError(
f"embed_dim must be divisible by num_heads (got `embed_dim`: {self.embed_dim} and `num_heads`:"
f" {num_heads})."
)
# head dimension of values
self.v_head_dim = out_dim // num_heads
if self.v_head_dim * num_heads != self.out_dim:
raise ValueError(
f"out_dim must be divisible by num_heads (got `out_dim`: {self.out_dim} and `num_heads`: {num_heads})."
)
self.scaling = self.head_dim**-0.5
self.out_proj = nn.Linear(out_dim, out_dim, bias=bias)
def _qk_shape(self, tensor: torch.Tensor, seq_len: int, batch_size: int):
return tensor.view(batch_size, seq_len, self.num_heads, self.head_dim).transpose(1, 2).contiguous()
def _v_shape(self, tensor: torch.Tensor, seq_len: int, batch_size: int):
return tensor.view(batch_size, seq_len, self.num_heads, self.v_head_dim).transpose(1, 2).contiguous()
def forward(
self,
hidden_states: torch.Tensor,
attention_mask: Optional[torch.Tensor] = None,
key_states: Optional[torch.Tensor] = None,
value_states: Optional[torch.Tensor] = None,
output_attentions: bool = False,
) -> Tuple[torch.Tensor, Optional[torch.Tensor], Optional[Tuple[torch.Tensor]]]:
"""Input shape: Batch x Time x Channel"""
batch_size, target_len, _ = hidden_states.size()
# get query proj
query_states = hidden_states * self.scaling
# get key, value proj
key_states = self._qk_shape(key_states, -1, batch_size)
value_states = self._v_shape(value_states, -1, batch_size)
proj_shape = (batch_size * self.num_heads, -1, self.head_dim)
v_proj_shape = (batch_size * self.num_heads, -1, self.v_head_dim)
query_states = self._qk_shape(query_states, target_len, batch_size).view(*proj_shape)
key_states = key_states.view(*proj_shape)
value_states = value_states.view(*v_proj_shape)
source_len = key_states.size(1)
attn_weights = torch.bmm(query_states, key_states.transpose(1, 2))
if attn_weights.size() != (batch_size * self.num_heads, target_len, source_len):
raise ValueError(
f"Attention weights should be of size {(batch_size * self.num_heads, target_len, source_len)}, but is"
f" {attn_weights.size()}"
)
if attention_mask is not None:
if attention_mask.size() != (batch_size, 1, target_len, source_len):
raise ValueError(
f"Attention mask should be of size {(batch_size, 1, target_len, source_len)}, but is"
f" {attention_mask.size()}"
)
attn_weights = attn_weights.view(batch_size, self.num_heads, target_len, source_len) + attention_mask
attn_weights = attn_weights.view(batch_size * self.num_heads, target_len, source_len)
attn_weights = nn.functional.softmax(attn_weights, dim=-1)
if output_attentions:
# this operation is a bit awkward, but it's required to
# make sure that attn_weights keeps its gradient.
# In order to do so, attn_weights have to reshaped
# twice and have to be reused in the following
attn_weights_reshaped = attn_weights.view(batch_size, self.num_heads, target_len, source_len)
attn_weights = attn_weights_reshaped.view(batch_size * self.num_heads, target_len, source_len)
else:
attn_weights_reshaped = None
attn_probs = nn.functional.dropout(attn_weights, p=self.dropout, training=self.training)
attn_output = torch.bmm(attn_probs, value_states)
if attn_output.size() != (batch_size * self.num_heads, target_len, self.v_head_dim):
raise ValueError(
f"`attn_output` should be of size {(batch_size, self.num_heads, target_len, self.v_head_dim)}, but is"
f" {attn_output.size()}"
)
attn_output = attn_output.view(batch_size, self.num_heads, target_len, self.v_head_dim)
attn_output = attn_output.transpose(1, 2)
attn_output = attn_output.reshape(batch_size, target_len, self.out_dim)
attn_output = self.out_proj(attn_output)
return attn_output, attn_weights_reshaped
# Copied from transformers.models.detr.modeling_detr.DetrEncoderLayer with DetrEncoderLayer->ConditionalDetrEncoderLayer,DetrConfig->ConditionalDetrConfig
class ConditionalDetrEncoderLayer(nn.Module):
def __init__(self, config: ConditionalDetrConfig):
super().__init__()
self.embed_dim = config.d_model
self.self_attn = DetrAttention(
embed_dim=self.embed_dim,
num_heads=config.encoder_attention_heads,
dropout=config.attention_dropout,
)
self.self_attn_layer_norm = nn.LayerNorm(self.embed_dim)
self.dropout = config.dropout
self.activation_fn = ACT2FN[config.activation_function]
self.activation_dropout = config.activation_dropout
self.fc1 = nn.Linear(self.embed_dim, config.encoder_ffn_dim)
self.fc2 = nn.Linear(config.encoder_ffn_dim, self.embed_dim)
self.final_layer_norm = nn.LayerNorm(self.embed_dim)
def forward(
self,
hidden_states: torch.Tensor,
attention_mask: torch.Tensor,
position_embeddings: torch.Tensor = None,
output_attentions: bool = False,
):
"""
Args:
hidden_states (`torch.FloatTensor`): input to the layer of shape `(batch, seq_len, embed_dim)`
attention_mask (`torch.FloatTensor`): attention mask of size
`(batch, 1, target_len, source_len)` where padding elements are indicated by very large negative
values.
position_embeddings (`torch.FloatTensor`, *optional*): position embeddings, to be added to hidden_states.
output_attentions (`bool`, *optional*):
Whether or not to return the attentions tensors of all attention layers. See `attentions` under
returned tensors for more detail.
"""
residual = hidden_states
hidden_states, attn_weights = self.self_attn(
hidden_states=hidden_states,
attention_mask=attention_mask,
position_embeddings=position_embeddings,
output_attentions=output_attentions,
)
hidden_states = nn.functional.dropout(hidden_states, p=self.dropout, training=self.training)
hidden_states = residual + hidden_states
hidden_states = self.self_attn_layer_norm(hidden_states)
residual = hidden_states
hidden_states = self.activation_fn(self.fc1(hidden_states))
hidden_states = nn.functional.dropout(hidden_states, p=self.activation_dropout, training=self.training)
hidden_states = self.fc2(hidden_states)
hidden_states = nn.functional.dropout(hidden_states, p=self.dropout, training=self.training)
hidden_states = residual + hidden_states
hidden_states = self.final_layer_norm(hidden_states)
if self.training:
if torch.isinf(hidden_states).any() or torch.isnan(hidden_states).any():
clamp_value = torch.finfo(hidden_states.dtype).max - 1000
hidden_states = torch.clamp(hidden_states, min=-clamp_value, max=clamp_value)
outputs = (hidden_states,)
if output_attentions:
outputs += (attn_weights,)
return outputs
class ConditionalDetrDecoderLayer(nn.Module):
def __init__(self, config: ConditionalDetrConfig):
super().__init__()
self.embed_dim = config.d_model
d_model = config.d_model
# Decoder Self-Attention projections
self.sa_qcontent_proj = nn.Linear(d_model, d_model)
self.sa_qpos_proj = nn.Linear(d_model, d_model)
self.sa_kcontent_proj = nn.Linear(d_model, d_model)
self.sa_kpos_proj = nn.Linear(d_model, d_model)
self.sa_v_proj = nn.Linear(d_model, d_model)
self.self_attn = ConditionalDetrAttention(
embed_dim=self.embed_dim,
out_dim=self.embed_dim,
num_heads=config.decoder_attention_heads,
dropout=config.attention_dropout,
)
self.dropout = config.dropout
self.activation_fn = ACT2FN[config.activation_function]
self.activation_dropout = config.activation_dropout
self.self_attn_layer_norm = nn.LayerNorm(self.embed_dim)
# Decoder Cross-Attention projections
self.ca_qcontent_proj = nn.Linear(d_model, d_model)
self.ca_qpos_proj = nn.Linear(d_model, d_model)
self.ca_kcontent_proj = nn.Linear(d_model, d_model)
self.ca_kpos_proj = nn.Linear(d_model, d_model)
self.ca_v_proj = nn.Linear(d_model, d_model)
self.ca_qpos_sine_proj = nn.Linear(d_model, d_model)
self.encoder_attn = ConditionalDetrAttention(
self.embed_dim * 2, self.embed_dim, config.decoder_attention_heads, dropout=config.attention_dropout
)
self.encoder_attn_layer_norm = nn.LayerNorm(self.embed_dim)
self.fc1 = nn.Linear(self.embed_dim, config.decoder_ffn_dim)
self.fc2 = nn.Linear(config.decoder_ffn_dim, self.embed_dim)
self.final_layer_norm = nn.LayerNorm(self.embed_dim)
self.nhead = config.decoder_attention_heads
def forward(
self,
hidden_states: torch.Tensor,
attention_mask: Optional[torch.Tensor] = None,
position_embeddings: Optional[torch.Tensor] = None,
query_position_embeddings: Optional[torch.Tensor] = None,
query_sine_embed: Optional[torch.Tensor] = None,
encoder_hidden_states: Optional[torch.Tensor] = None,
encoder_attention_mask: Optional[torch.Tensor] = None,
output_attentions: Optional[bool] = False,
is_first: Optional[bool] = False,
):
"""
Args:
hidden_states (`torch.FloatTensor`): input to the layer of shape `(seq_len, batch, embed_dim)`
attention_mask (`torch.FloatTensor`): attention mask of size
`(batch, 1, target_len, source_len)` where padding elements are indicated by very large negative
values.
position_embeddings (`torch.FloatTensor`, *optional*):
position embeddings that are added to the queries and keys
in the cross-attention layer.
query_position_embeddings (`torch.FloatTensor`, *optional*):
position embeddings that are added to the queries and keys
in the self-attention layer.
encoder_hidden_states (`torch.FloatTensor`):
cross attention input to the layer of shape `(seq_len, batch, embed_dim)`
encoder_attention_mask (`torch.FloatTensor`): encoder attention mask of size
`(batch, 1, target_len, source_len)` where padding elements are indicated by very large negative
values.
output_attentions (`bool`, *optional*):
Whether or not to return the attentions tensors of all attention layers. See `attentions` under
returned tensors for more detail.
"""
residual = hidden_states
# ========== Begin of Self-Attention =============
# Apply projections here
# shape: num_queries x batch_size x 256
q_content = self.sa_qcontent_proj(
hidden_states
) # target is the input of the first decoder layer. zero by default.
q_pos = self.sa_qpos_proj(query_position_embeddings)
k_content = self.sa_kcontent_proj(hidden_states)
k_pos = self.sa_kpos_proj(query_position_embeddings)
v = self.sa_v_proj(hidden_states)
_, num_queries, n_model = q_content.shape
q = q_content + q_pos
k = k_content + k_pos
hidden_states, self_attn_weights = self.self_attn(
hidden_states=q,
attention_mask=attention_mask,
key_states=k,
value_states=v,
output_attentions=output_attentions,
)
# ============ End of Self-Attention =============
hidden_states = nn.functional.dropout(hidden_states, p=self.dropout, training=self.training)
hidden_states = residual + hidden_states
hidden_states = self.self_attn_layer_norm(hidden_states)
# ========== Begin of Cross-Attention =============
# Apply projections here
# shape: num_queries x batch_size x 256
q_content = self.ca_qcontent_proj(hidden_states)
k_content = self.ca_kcontent_proj(encoder_hidden_states)
v = self.ca_v_proj(encoder_hidden_states)
batch_size, num_queries, n_model = q_content.shape
_, source_len, _ = k_content.shape
k_pos = self.ca_kpos_proj(position_embeddings)
# For the first decoder layer, we concatenate the positional embedding predicted from
# the object query (the positional embedding) into the original query (key) in DETR.
if is_first:
q_pos = self.ca_qpos_proj(query_position_embeddings)
q = q_content + q_pos
k = k_content + k_pos
else:
q = q_content
k = k_content
q = q.view(batch_size, num_queries, self.nhead, n_model // self.nhead)
query_sine_embed = self.ca_qpos_sine_proj(query_sine_embed)
query_sine_embed = query_sine_embed.view(batch_size, num_queries, self.nhead, n_model // self.nhead)
q = torch.cat([q, query_sine_embed], dim=3).view(batch_size, num_queries, n_model * 2)
k = k.view(batch_size, source_len, self.nhead, n_model // self.nhead)
k_pos = k_pos.view(batch_size, source_len, self.nhead, n_model // self.nhead)
k = torch.cat([k, k_pos], dim=3).view(batch_size, source_len, n_model * 2)
# Cross-Attention Block
cross_attn_weights = None
if encoder_hidden_states is not None:
residual = hidden_states
hidden_states, cross_attn_weights = self.encoder_attn(
hidden_states=q,
attention_mask=encoder_attention_mask,
key_states=k,
value_states=v,
output_attentions=output_attentions,
)
hidden_states = nn.functional.dropout(hidden_states, p=self.dropout, training=self.training)
hidden_states = residual + hidden_states
hidden_states = self.encoder_attn_layer_norm(hidden_states)
# ============ End of Cross-Attention =============
# Fully Connected
residual = hidden_states
hidden_states = self.activation_fn(self.fc1(hidden_states))
hidden_states = nn.functional.dropout(hidden_states, p=self.activation_dropout, training=self.training)
hidden_states = self.fc2(hidden_states)
hidden_states = nn.functional.dropout(hidden_states, p=self.dropout, training=self.training)
hidden_states = residual + hidden_states
hidden_states = self.final_layer_norm(hidden_states)
outputs = (hidden_states,)
if output_attentions:
outputs += (self_attn_weights, cross_attn_weights)
return outputs
# Copied from transformers.models.detr.modeling_detr.DetrClassificationHead with Detr->ConditionalDetr
class ConditionalDetrClassificationHead(nn.Module):
"""Head for sentence-level classification tasks."""
def __init__(self, input_dim: int, inner_dim: int, num_classes: int, pooler_dropout: float):
super().__init__()
self.dense = nn.Linear(input_dim, inner_dim)
self.dropout = nn.Dropout(p=pooler_dropout)
self.out_proj = nn.Linear(inner_dim, num_classes)
def forward(self, hidden_states: torch.Tensor):
hidden_states = self.dropout(hidden_states)
hidden_states = self.dense(hidden_states)
hidden_states = torch.tanh(hidden_states)
hidden_states = self.dropout(hidden_states)
hidden_states = self.out_proj(hidden_states)
return hidden_states
# Copied from transformers.models.detr.modeling_detr.DetrMLPPredictionHead with DetrMLPPredictionHead->MLP
class MLP(nn.Module):
"""
Very simple multi-layer perceptron (MLP, also called FFN), used to predict the normalized center coordinates,
height and width of a bounding box w.r.t. an image.
Copied from https://github.com/facebookresearch/detr/blob/master/models/detr.py
"""
def __init__(self, input_dim, hidden_dim, output_dim, num_layers):
super().__init__()
self.num_layers = num_layers
h = [hidden_dim] * (num_layers - 1)
self.layers = nn.ModuleList(nn.Linear(n, k) for n, k in zip([input_dim] + h, h + [output_dim]))
def forward(self, x):
for i, layer in enumerate(self.layers):
x = nn.functional.relu(layer(x)) if i < self.num_layers - 1 else layer(x)
return x
# Copied from transformers.models.detr.modeling_detr.DetrPreTrainedModel with Detr->ConditionalDetr
class ConditionalDetrPreTrainedModel(PreTrainedModel):
config_class = ConditionalDetrConfig
base_model_prefix = "model"
main_input_name = "pixel_values"
def _init_weights(self, module):
std = self.config.init_std
xavier_std = self.config.init_xavier_std
if isinstance(module, ConditionalDetrMHAttentionMap):
nn.init.zeros_(module.k_linear.bias)
nn.init.zeros_(module.q_linear.bias)
nn.init.xavier_uniform_(module.k_linear.weight, gain=xavier_std)
nn.init.xavier_uniform_(module.q_linear.weight, gain=xavier_std)
elif isinstance(module, ConditionalDetrLearnedPositionEmbedding):
nn.init.uniform_(module.row_embeddings.weight)
nn.init.uniform_(module.column_embeddings.weight)
if isinstance(module, (nn.Linear, nn.Conv2d, nn.BatchNorm2d)):
# Slightly different from the TF version which uses truncated_normal for initialization
# cf https://github.com/pytorch/pytorch/pull/5617
module.weight.data.normal_(mean=0.0, std=std)
if module.bias is not None:
module.bias.data.zero_()
elif isinstance(module, nn.Embedding):
module.weight.data.normal_(mean=0.0, std=std)
if module.padding_idx is not None:
module.weight.data[module.padding_idx].zero_()
def _set_gradient_checkpointing(self, module, value=False):
if isinstance(module, ConditionalDetrDecoder):
module.gradient_checkpointing = value
CONDITIONAL_DETR_START_DOCSTRING = r"""
This model inherits from [`PreTrainedModel`]. Check the superclass documentation for the generic methods the
library implements for all its model (such as downloading or saving, resizing the input embeddings, pruning heads
etc.)
This model is also a PyTorch [torch.nn.Module](https://pytorch.org/docs/stable/nn.html#torch.nn.Module) subclass.
Use it as a regular PyTorch Module and refer to the PyTorch documentation for all matter related to general usage
and behavior.
Parameters:
config ([`ConditionalDetrConfig`]):
Model configuration class with all the parameters of the model. Initializing with a config file does not
load the weights associated with the model, only the configuration. Check out the
[`~PreTrainedModel.from_pretrained`] method to load the model weights.
"""
CONDITIONAL_DETR_INPUTS_DOCSTRING = r"""
Args:
pixel_values (`torch.FloatTensor` of shape `(batch_size, num_channels, height, width)`):
Pixel values. Padding will be ignored by default should you provide it.
Pixel values can be obtained using [`AutoImageProcessor`]. See [`ConditionalDetrImageProcessor.__call__`]
for details.
pixel_mask (`torch.LongTensor` of shape `(batch_size, height, width)`, *optional*):
Mask to avoid performing attention on padding pixel values. Mask values selected in `[0, 1]`:
- 1 for pixels that are real (i.e. **not masked**),
- 0 for pixels that are padding (i.e. **masked**).
[What are attention masks?](../glossary#attention-mask)
decoder_attention_mask (`torch.LongTensor` of shape `(batch_size, num_queries)`, *optional*):
Not used by default. Can be used to mask object queries.
encoder_outputs (`tuple(tuple(torch.FloatTensor)`, *optional*):
Tuple consists of (`last_hidden_state`, *optional*: `hidden_states`, *optional*: `attentions`)
`last_hidden_state` of shape `(batch_size, sequence_length, hidden_size)`, *optional*) is a sequence of
hidden-states at the output of the last layer of the encoder. Used in the cross-attention of the decoder.
inputs_embeds (`torch.FloatTensor` of shape `(batch_size, sequence_length, hidden_size)`, *optional*):
Optionally, instead of passing the flattened feature map (output of the backbone + projection layer), you
can choose to directly pass a flattened representation of an image.
decoder_inputs_embeds (`torch.FloatTensor` of shape `(batch_size, num_queries, hidden_size)`, *optional*):
Optionally, instead of initializing the queries with a tensor of zeros, you can choose to directly pass an
embedded representation.
output_attentions (`bool`, *optional*):
Whether or not to return the attentions tensors of all attention layers. See `attentions` under returned
tensors for more detail.
output_hidden_states (`bool`, *optional*):
Whether or not to return the hidden states of all layers. See `hidden_states` under returned tensors for
more detail.
return_dict (`bool`, *optional*):
Whether or not to return a [`~utils.ModelOutput`] instead of a plain tuple.
"""
# Copied from transformers.models.detr.modeling_detr.DetrEncoder with Detr->ConditionalDetr,DETR->ConditionalDETR
class ConditionalDetrEncoder(ConditionalDetrPreTrainedModel):
"""
Transformer encoder consisting of *config.encoder_layers* self attention layers. Each layer is a
[`ConditionalDetrEncoderLayer`].
The encoder updates the flattened feature map through multiple self-attention layers.
Small tweak for ConditionalDETR:
- position_embeddings are added to the forward pass.
Args:
config: ConditionalDetrConfig
"""
def __init__(self, config: ConditionalDetrConfig):
super().__init__(config)
self.dropout = config.dropout
self.layerdrop = config.encoder_layerdrop
self.layers = nn.ModuleList([ConditionalDetrEncoderLayer(config) for _ in range(config.encoder_layers)])
# in the original ConditionalDETR, no layernorm is used at the end of the encoder, as "normalize_before" is set to False by default
# Initialize weights and apply final processing
self.post_init()
def forward(
self,
inputs_embeds=None,
attention_mask=None,
position_embeddings=None,
output_attentions=None,
output_hidden_states=None,
return_dict=None,
):
r"""
Args:
inputs_embeds (`torch.FloatTensor` of shape `(batch_size, sequence_length, hidden_size)`):
Flattened feature map (output of the backbone + projection layer) that is passed to the encoder.
attention_mask (`torch.Tensor` of shape `(batch_size, sequence_length)`, *optional*):
Mask to avoid performing attention on padding pixel features. Mask values selected in `[0, 1]`:
- 1 for pixel features that are real (i.e. **not masked**),
- 0 for pixel features that are padding (i.e. **masked**).
[What are attention masks?](../glossary#attention-mask)
position_embeddings (`torch.FloatTensor` of shape `(batch_size, sequence_length, hidden_size)`):
Position embeddings that are added to the queries and keys in each self-attention layer.
output_attentions (`bool`, *optional*):
Whether or not to return the attentions tensors of all attention layers. See `attentions` under
returned tensors for more detail.
output_hidden_states (`bool`, *optional*):
Whether or not to return the hidden states of all layers. See `hidden_states` under returned tensors
for more detail.
return_dict (`bool`, *optional*):
Whether or not to return a [`~utils.ModelOutput`] instead of a plain tuple.
"""
output_attentions = output_attentions if output_attentions is not None else self.config.output_attentions
output_hidden_states = (
output_hidden_states if output_hidden_states is not None else self.config.output_hidden_states
)
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
hidden_states = inputs_embeds
hidden_states = nn.functional.dropout(hidden_states, p=self.dropout, training=self.training)
# expand attention_mask
if attention_mask is not None:
# [batch_size, seq_len] -> [batch_size, 1, target_seq_len, source_seq_len]
attention_mask = _expand_mask(attention_mask, inputs_embeds.dtype)
encoder_states = () if output_hidden_states else None
all_attentions = () if output_attentions else None
for i, encoder_layer in enumerate(self.layers):
if output_hidden_states:
encoder_states = encoder_states + (hidden_states,)
# add LayerDrop (see https://arxiv.org/abs/1909.11556 for description)
to_drop = False
if self.training:
dropout_probability = torch.rand([])
if dropout_probability < self.layerdrop: # skip the layer
to_drop = True
if to_drop:
layer_outputs = (None, None)
else:
# we add position_embeddings as extra input to the encoder_layer
layer_outputs = encoder_layer(
hidden_states,
attention_mask,
position_embeddings=position_embeddings,
output_attentions=output_attentions,
)
hidden_states = layer_outputs[0]
if output_attentions:
all_attentions = all_attentions + (layer_outputs[1],)
if output_hidden_states:
encoder_states = encoder_states + (hidden_states,)
if not return_dict:
return tuple(v for v in [hidden_states, encoder_states, all_attentions] if v is not None)
return BaseModelOutput(
last_hidden_state=hidden_states, hidden_states=encoder_states, attentions=all_attentions
)
class ConditionalDetrDecoder(ConditionalDetrPreTrainedModel):
"""
Transformer decoder consisting of *config.decoder_layers* layers. Each layer is a [`ConditionalDetrDecoderLayer`].
The decoder updates the query embeddings through multiple self-attention and cross-attention layers.
Some small tweaks for Conditional DETR:
- position_embeddings and query_position_embeddings are added to the forward pass.
- if self.config.auxiliary_loss is set to True, also returns a stack of activations from all decoding layers.
Args:
config: ConditionalDetrConfig
"""
def __init__(self, config: ConditionalDetrConfig):
super().__init__(config)
self.dropout = config.dropout
self.layerdrop = config.decoder_layerdrop
self.layers = nn.ModuleList([ConditionalDetrDecoderLayer(config) for _ in range(config.decoder_layers)])
# in Conditional DETR, the decoder uses layernorm after the last decoder layer output
self.layernorm = nn.LayerNorm(config.d_model)
d_model = config.d_model
self.gradient_checkpointing = False
# query_scale is the FFN applied on f to generate transformation T
self.query_scale = MLP(d_model, d_model, d_model, 2)
self.ref_point_head = MLP(d_model, d_model, 2, 2)
for layer_id in range(config.decoder_layers - 1):
self.layers[layer_id + 1].ca_qpos_proj = None
# Initialize weights and apply final processing
self.post_init()
def forward(
self,
inputs_embeds=None,
attention_mask=None,
encoder_hidden_states=None,
encoder_attention_mask=None,
position_embeddings=None,
query_position_embeddings=None,
output_attentions=None,
output_hidden_states=None,
return_dict=None,
):
r"""
Args:
inputs_embeds (`torch.FloatTensor` of shape `(batch_size, sequence_length, hidden_size)`):
The query embeddings that are passed into the decoder.
attention_mask (`torch.Tensor` of shape `(batch_size, sequence_length)`, *optional*):
Mask to avoid performing attention on certain queries. Mask values selected in `[0, 1]`:
- 1 for queries that are **not masked**,
- 0 for queries that are **masked**.
[What are attention masks?](../glossary#attention-mask)
encoder_hidden_states (`torch.FloatTensor` of shape `(batch_size, encoder_sequence_length, hidden_size)`, *optional*):
Sequence of hidden-states at the output of the last layer of the encoder. Used in the cross-attention
of the decoder.
encoder_attention_mask (`torch.LongTensor` of shape `(batch_size, encoder_sequence_length)`, *optional*):
Mask to avoid performing cross-attention on padding pixel_values of the encoder. Mask values selected
in `[0, 1]`:
- 1 for pixels that are real (i.e. **not masked**),
- 0 for pixels that are padding (i.e. **masked**).
position_embeddings (`torch.FloatTensor` of shape `(batch_size, sequence_length, hidden_size)`, *optional*):
Position embeddings that are added to the queries and keys in each cross-attention layer.
query_position_embeddings (`torch.FloatTensor` of shape `(batch_size, num_queries, hidden_size)`):
, *optional*): Position embeddings that are added to the queries and keys in each self-attention layer.
output_attentions (`bool`, *optional*):
Whether or not to return the attentions tensors of all attention layers. See `attentions` under
returned tensors for more detail.
output_hidden_states (`bool`, *optional*):
Whether or not to return the hidden states of all layers. See `hidden_states` under returned tensors
for more detail.
return_dict (`bool`, *optional*):
Whether or not to return a [`~utils.ModelOutput`] instead of a plain tuple.
"""
output_attentions = output_attentions if output_attentions is not None else self.config.output_attentions
output_hidden_states = (
output_hidden_states if output_hidden_states is not None else self.config.output_hidden_states
)
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
if inputs_embeds is not None:
hidden_states = inputs_embeds
input_shape = inputs_embeds.size()[:-1]
combined_attention_mask = None
if attention_mask is not None and combined_attention_mask is not None:
# [batch_size, seq_len] -> [batch_size, 1, target_seq_len, source_seq_len]
combined_attention_mask = combined_attention_mask + _expand_mask(
attention_mask, inputs_embeds.dtype, target_len=input_shape[-1]
)
# expand encoder attention mask
if encoder_hidden_states is not None and encoder_attention_mask is not None:
# [batch_size, seq_len] -> [batch_size, 1, target_seq_len, source_seq_len]
encoder_attention_mask = _expand_mask(
encoder_attention_mask, inputs_embeds.dtype, target_len=input_shape[-1]
)
# optional intermediate hidden states
intermediate = () if self.config.auxiliary_loss else None
# decoder layers
all_hidden_states = () if output_hidden_states else None
all_self_attns = () if output_attentions else None
all_cross_attentions = () if (output_attentions and encoder_hidden_states is not None) else None
reference_points_before_sigmoid = self.ref_point_head(
query_position_embeddings
) # [num_queries, batch_size, 2]
reference_points = reference_points_before_sigmoid.sigmoid().transpose(0, 1)
obj_center = reference_points[..., :2].transpose(0, 1)
# get sine embedding for the query vector
query_sine_embed_before_transformation = gen_sine_position_embeddings(obj_center, self.config.d_model)
for idx, decoder_layer in enumerate(self.layers):
# add LayerDrop (see https://arxiv.org/abs/1909.11556 for description)
if output_hidden_states:
all_hidden_states += (hidden_states,)
if self.training:
dropout_probability = torch.rand([])
if dropout_probability < self.layerdrop:
continue
if idx == 0:
pos_transformation = 1
else:
pos_transformation = self.query_scale(hidden_states)
# apply transformation
query_sine_embed = query_sine_embed_before_transformation * pos_transformation
if self.gradient_checkpointing and self.training:
def create_custom_forward(module):
def custom_forward(*inputs):
return module(*inputs, output_attentions)
return custom_forward
layer_outputs = torch.utils.checkpoint.checkpoint(
create_custom_forward(decoder_layer),
hidden_states,
combined_attention_mask,
position_embeddings,
query_position_embeddings,
query_sine_embed,
encoder_hidden_states,
encoder_attention_mask,
None,
None,
)
else:
layer_outputs = decoder_layer(
hidden_states,
attention_mask=combined_attention_mask,
position_embeddings=position_embeddings,
query_position_embeddings=query_position_embeddings,
query_sine_embed=query_sine_embed,
encoder_hidden_states=encoder_hidden_states,
encoder_attention_mask=encoder_attention_mask,
output_attentions=output_attentions,
is_first=(idx == 0),
)
hidden_states = layer_outputs[0]
if self.config.auxiliary_loss:
hidden_states = self.layernorm(hidden_states)
intermediate += (hidden_states,)
if output_attentions:
all_self_attns += (layer_outputs[1],)
if encoder_hidden_states is not None:
all_cross_attentions += (layer_outputs[2],)
# finally, apply layernorm
hidden_states = self.layernorm(hidden_states)
# add hidden states from the last decoder layer
if output_hidden_states:
all_hidden_states += (hidden_states,)
# stack intermediate decoder activations
if self.config.auxiliary_loss:
intermediate = torch.stack(intermediate)
if not return_dict:
return tuple(
v
for v in [
hidden_states,
all_hidden_states,
all_self_attns,
all_cross_attentions,
intermediate,
reference_points,
]
if v is not None
)
return ConditionalDetrDecoderOutput(
last_hidden_state=hidden_states,
hidden_states=all_hidden_states,
attentions=all_self_attns,
cross_attentions=all_cross_attentions,
intermediate_hidden_states=intermediate,
reference_points=reference_points,
)
@add_start_docstrings(
"""
The bare Conditional DETR Model (consisting of a backbone and encoder-decoder Transformer) outputting raw
hidden-states without any specific head on top.
""",
CONDITIONAL_DETR_START_DOCSTRING,
)
class ConditionalDetrModel(ConditionalDetrPreTrainedModel):
def __init__(self, config: ConditionalDetrConfig):
super().__init__(config)
# Create backbone + positional encoding
backbone = ConditionalDetrConvEncoder(config)
position_embeddings = build_position_encoding(config)
self.backbone = ConditionalDetrConvModel(backbone, position_embeddings)
# Create projection layer
self.input_projection = nn.Conv2d(backbone.intermediate_channel_sizes[-1], config.d_model, kernel_size=1)
self.query_position_embeddings = nn.Embedding(config.num_queries, config.d_model)
self.encoder = ConditionalDetrEncoder(config)
self.decoder = ConditionalDetrDecoder(config)
# Initialize weights and apply final processing
self.post_init()
def get_encoder(self):
return self.encoder
def get_decoder(self):
return self.decoder
def freeze_backbone(self):
for name, param in self.backbone.conv_encoder.model.named_parameters():
param.requires_grad_(False)
def unfreeze_backbone(self):
for name, param in self.backbone.conv_encoder.model.named_parameters():
param.requires_grad_(True)
@add_start_docstrings_to_model_forward(CONDITIONAL_DETR_INPUTS_DOCSTRING)
@replace_return_docstrings(output_type=ConditionalDetrModelOutput, config_class=_CONFIG_FOR_DOC)
def forward(
self,
pixel_values,
pixel_mask=None,
decoder_attention_mask=None,
encoder_outputs=None,
inputs_embeds=None,
decoder_inputs_embeds=None,
output_attentions=None,
output_hidden_states=None,
return_dict=None,
):
r"""
Returns:
Examples:
```python
>>> from transformers import AutoImageProcessor, AutoModel
>>> from PIL import Image
>>> import requests
>>> url = "http://images.cocodataset.org/val2017/000000039769.jpg"
>>> image = Image.open(requests.get(url, stream=True).raw)
>>> image_processor = AutoImageProcessor.from_pretrained("microsoft/conditional-detr-resnet-50")
>>> model = AutoModel.from_pretrained("microsoft/conditional-detr-resnet-50")
>>> # prepare image for the model
>>> inputs = image_processor(images=image, return_tensors="pt")
>>> # forward pass
>>> outputs = model(**inputs)
>>> # the last hidden states are the final query embeddings of the Transformer decoder
>>> # these are of shape (batch_size, num_queries, hidden_size)
>>> last_hidden_states = outputs.last_hidden_state
>>> list(last_hidden_states.shape)
[1, 300, 256]
```"""
output_attentions = output_attentions if output_attentions is not None else self.config.output_attentions
output_hidden_states = (
output_hidden_states if output_hidden_states is not None else self.config.output_hidden_states
)
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
batch_size, num_channels, height, width = pixel_values.shape
device = pixel_values.device
if pixel_mask is None:
pixel_mask = torch.ones(((batch_size, height, width)), device=device)
# First, sent pixel_values + pixel_mask through Backbone to obtain the features
# pixel_values should be of shape (batch_size, num_channels, height, width)
# pixel_mask should be of shape (batch_size, height, width)
features, position_embeddings_list = self.backbone(pixel_values, pixel_mask)
# get final feature map and downsampled mask
feature_map, mask = features[-1]
if mask is None:
raise ValueError("Backbone does not return downsampled pixel mask")
# Second, apply 1x1 convolution to reduce the channel dimension to d_model (256 by default)
projected_feature_map = self.input_projection(feature_map)
# Third, flatten the feature map + position embeddings of shape NxCxHxW to NxCxHW, and permute it to NxHWxC
# In other words, turn their shape into (batch_size, sequence_length, hidden_size)
flattened_features = projected_feature_map.flatten(2).permute(0, 2, 1)
position_embeddings = position_embeddings_list[-1].flatten(2).permute(0, 2, 1)
flattened_mask = mask.flatten(1)
# Fourth, sent flattened_features + flattened_mask + position embeddings through encoder
# flattened_features is a Tensor of shape (batch_size, heigth*width, hidden_size)
# flattened_mask is a Tensor of shape (batch_size, heigth*width)
if encoder_outputs is None:
encoder_outputs = self.encoder(
inputs_embeds=flattened_features,
attention_mask=flattened_mask,
position_embeddings=position_embeddings,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
# If the user passed a tuple for encoder_outputs, we wrap it in a BaseModelOutput when return_dict=True
elif return_dict and not isinstance(encoder_outputs, BaseModelOutput):
encoder_outputs = BaseModelOutput(
last_hidden_state=encoder_outputs[0],
hidden_states=encoder_outputs[1] if len(encoder_outputs) > 1 else None,
attentions=encoder_outputs[2] if len(encoder_outputs) > 2 else None,
)
# Fifth, sent query embeddings + position embeddings through the decoder (which is conditioned on the encoder output)
query_position_embeddings = self.query_position_embeddings.weight.unsqueeze(0).repeat(batch_size, 1, 1)
queries = torch.zeros_like(query_position_embeddings)
# decoder outputs consists of (dec_features, dec_hidden, dec_attn)
decoder_outputs = self.decoder(
inputs_embeds=queries,
attention_mask=None,
position_embeddings=position_embeddings,
query_position_embeddings=query_position_embeddings,
encoder_hidden_states=encoder_outputs[0],
encoder_attention_mask=flattened_mask,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
if not return_dict:
return decoder_outputs + encoder_outputs
return ConditionalDetrModelOutput(
last_hidden_state=decoder_outputs.last_hidden_state,
decoder_hidden_states=decoder_outputs.hidden_states,
decoder_attentions=decoder_outputs.attentions,
cross_attentions=decoder_outputs.cross_attentions,
encoder_last_hidden_state=encoder_outputs.last_hidden_state,
encoder_hidden_states=encoder_outputs.hidden_states,
encoder_attentions=encoder_outputs.attentions,
intermediate_hidden_states=decoder_outputs.intermediate_hidden_states,
reference_points=decoder_outputs.reference_points,
)
@add_start_docstrings(
"""
CONDITIONAL_DETR Model (consisting of a backbone and encoder-decoder Transformer) with object detection heads on
top, for tasks such as COCO detection.
""",
CONDITIONAL_DETR_START_DOCSTRING,
)
class ConditionalDetrForObjectDetection(ConditionalDetrPreTrainedModel):
def __init__(self, config: ConditionalDetrConfig):
super().__init__(config)
# CONDITIONAL DETR encoder-decoder model
self.model = ConditionalDetrModel(config)
# Object detection heads
self.class_labels_classifier = nn.Linear(
config.d_model, config.num_labels
) # We add one for the "no object" class
self.bbox_predictor = ConditionalDetrMLPPredictionHead(
input_dim=config.d_model, hidden_dim=config.d_model, output_dim=4, num_layers=3
)
# Initialize weights and apply final processing
self.post_init()
# taken from https://github.com/Atten4Vis/conditionalDETR/blob/master/models/conditional_detr.py
@torch.jit.unused
def _set_aux_loss(self, outputs_class, outputs_coord):
# this is a workaround to make torchscript happy, as torchscript
# doesn't support dictionary with non-homogeneous values, such
# as a dict having both a Tensor and a list.
return [{"logits": a, "pred_boxes": b} for a, b in zip(outputs_class[:-1], outputs_coord[:-1])]
@add_start_docstrings_to_model_forward(CONDITIONAL_DETR_INPUTS_DOCSTRING)
@replace_return_docstrings(output_type=ConditionalDetrObjectDetectionOutput, config_class=_CONFIG_FOR_DOC)
def forward(
self,
pixel_values,
pixel_mask=None,
decoder_attention_mask=None,
encoder_outputs=None,
inputs_embeds=None,
decoder_inputs_embeds=None,
labels=None,
output_attentions=None,
output_hidden_states=None,
return_dict=None,
):
r"""
labels (`List[Dict]` of len `(batch_size,)`, *optional*):
Labels for computing the bipartite matching loss. List of dicts, each dictionary containing at least the
following 2 keys: 'class_labels' and 'boxes' (the class labels and bounding boxes of an image in the batch
respectively). The class labels themselves should be a `torch.LongTensor` of len `(number of bounding boxes
in the image,)` and the boxes a `torch.FloatTensor` of shape `(number of bounding boxes in the image, 4)`.
Returns:
Examples:
```python
>>> from transformers import AutoImageProcessor, AutoModelForObjectDetection
>>> from PIL import Image
>>> import requests
>>> url = "http://images.cocodataset.org/val2017/000000039769.jpg"
>>> image = Image.open(requests.get(url, stream=True).raw)
>>> image_processor = AutoImageProcessor.from_pretrained("microsoft/conditional-detr-resnet-50")
>>> model = AutoModelForObjectDetection.from_pretrained("microsoft/conditional-detr-resnet-50")
>>> inputs = image_processor(images=image, return_tensors="pt")
>>> outputs = model(**inputs)
>>> # convert outputs (bounding boxes and class logits) to COCO API
>>> target_sizes = torch.tensor([image.size[::-1]])
>>> results = image_processor.post_process_object_detection(outputs, threshold=0.5, target_sizes=target_sizes)[
... 0
... ]
>>> for score, label, box in zip(results["scores"], results["labels"], results["boxes"]):
... box = [round(i, 2) for i in box.tolist()]
... print(
... f"Detected {model.config.id2label[label.item()]} with confidence "
... f"{round(score.item(), 3)} at location {box}"
... )
Detected remote with confidence 0.833 at location [38.31, 72.1, 177.63, 118.45]
Detected cat with confidence 0.831 at location [9.2, 51.38, 321.13, 469.0]
Detected cat with confidence 0.804 at location [340.3, 16.85, 642.93, 370.95]
Detected remote with confidence 0.683 at location [334.48, 73.49, 366.37, 190.01]
Detected couch with confidence 0.535 at location [0.52, 1.19, 640.35, 475.1]
```"""
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
# First, sent images through CONDITIONAL_DETR base model to obtain encoder + decoder outputs
outputs = self.model(
pixel_values,
pixel_mask=pixel_mask,
decoder_attention_mask=decoder_attention_mask,
encoder_outputs=encoder_outputs,
inputs_embeds=inputs_embeds,
decoder_inputs_embeds=decoder_inputs_embeds,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
sequence_output = outputs[0]
# class logits + predicted bounding boxes
logits = self.class_labels_classifier(sequence_output)
reference = outputs.reference_points if return_dict else outputs[-1]
reference_before_sigmoid = inverse_sigmoid(reference).transpose(0, 1)
outputs_coords = []
hs = sequence_output
tmp = self.bbox_predictor(hs)
tmp[..., :2] += reference_before_sigmoid
pred_boxes = tmp.sigmoid()
# pred_boxes = self.bbox_predictor(sequence_output).sigmoid()
loss, loss_dict, auxiliary_outputs = None, None, None
if labels is not None:
# First: create the matcher
matcher = ConditionalDetrHungarianMatcher(
class_cost=self.config.class_cost, bbox_cost=self.config.bbox_cost, giou_cost=self.config.giou_cost
)
# Second: create the criterion
losses = ["labels", "boxes", "cardinality"]
criterion = ConditionalDetrLoss(
matcher=matcher,
num_classes=self.config.num_labels,
focal_alpha=self.config.focal_alpha,
losses=losses,
)
criterion.to(self.device)
# Third: compute the losses, based on outputs and labels
outputs_loss = {}
outputs_loss["logits"] = logits
outputs_loss["pred_boxes"] = pred_boxes
if self.config.auxiliary_loss:
intermediate = outputs.intermediate_hidden_states if return_dict else outputs[4]
outputs_class = self.class_labels_classifier(intermediate)
for lvl in range(hs.shape[0]):
tmp = self.bbox_predictor(hs[lvl])
tmp[..., :2] += reference_before_sigmoid
outputs_coord = tmp.sigmoid()
outputs_coords.append(outputs_coord)
outputs_coord = torch.stack(outputs_coords)
auxiliary_outputs = self._set_aux_loss(outputs_class, outputs_coord)
outputs_loss["auxiliary_outputs"] = auxiliary_outputs
loss_dict = criterion(outputs_loss, labels)
# Fourth: compute total loss, as a weighted sum of the various losses
weight_dict = {"loss_ce": self.config.cls_loss_coefficient, "loss_bbox": self.config.bbox_loss_coefficient}
weight_dict["loss_giou"] = self.config.giou_loss_coefficient
if self.config.auxiliary_loss:
aux_weight_dict = {}
for i in range(self.config.decoder_layers - 1):
aux_weight_dict.update({k + f"_{i}": v for k, v in weight_dict.items()})
weight_dict.update(aux_weight_dict)
loss = sum(loss_dict[k] * weight_dict[k] for k in loss_dict.keys() if k in weight_dict)
if not return_dict:
if auxiliary_outputs is not None:
output = (logits, pred_boxes) + auxiliary_outputs + outputs
else:
output = (logits, pred_boxes) + outputs
return ((loss, loss_dict) + output) if loss is not None else output
return ConditionalDetrObjectDetectionOutput(
loss=loss,
loss_dict=loss_dict,
logits=logits,
pred_boxes=pred_boxes,
auxiliary_outputs=auxiliary_outputs,
last_hidden_state=outputs.last_hidden_state,
decoder_hidden_states=outputs.decoder_hidden_states,
decoder_attentions=outputs.decoder_attentions,
cross_attentions=outputs.cross_attentions,
encoder_last_hidden_state=outputs.encoder_last_hidden_state,
encoder_hidden_states=outputs.encoder_hidden_states,
encoder_attentions=outputs.encoder_attentions,
)
@add_start_docstrings(
"""
CONDITIONAL_DETR Model (consisting of a backbone and encoder-decoder Transformer) with a segmentation head on top,
for tasks such as COCO panoptic.
""",
CONDITIONAL_DETR_START_DOCSTRING,
)
class ConditionalDetrForSegmentation(ConditionalDetrPreTrainedModel):
def __init__(self, config: ConditionalDetrConfig):
super().__init__(config)
# object detection model
self.conditional_detr = ConditionalDetrForObjectDetection(config)
# segmentation head
hidden_size, number_of_heads = config.d_model, config.encoder_attention_heads
intermediate_channel_sizes = self.conditional_detr.model.backbone.conv_encoder.intermediate_channel_sizes
self.mask_head = ConditionalDetrMaskHeadSmallConv(
hidden_size + number_of_heads, intermediate_channel_sizes[::-1][-3:], hidden_size
)
self.bbox_attention = ConditionalDetrMHAttentionMap(
hidden_size, hidden_size, number_of_heads, dropout=0.0, std=config.init_xavier_std
)
# Initialize weights and apply final processing
self.post_init()
@add_start_docstrings_to_model_forward(CONDITIONAL_DETR_INPUTS_DOCSTRING)
@replace_return_docstrings(output_type=ConditionalDetrSegmentationOutput, config_class=_CONFIG_FOR_DOC)
def forward(
self,
pixel_values,
pixel_mask=None,
decoder_attention_mask=None,
encoder_outputs=None,
inputs_embeds=None,
decoder_inputs_embeds=None,
labels=None,
output_attentions=None,
output_hidden_states=None,
return_dict=None,
):
r"""
labels (`List[Dict]` of len `(batch_size,)`, *optional*):
Labels for computing the bipartite matching loss, DICE/F-1 loss and Focal loss. List of dicts, each
dictionary containing at least the following 3 keys: 'class_labels', 'boxes' and 'masks' (the class labels,
bounding boxes and segmentation masks of an image in the batch respectively). The class labels themselves
should be a `torch.LongTensor` of len `(number of bounding boxes in the image,)`, the boxes a
`torch.FloatTensor` of shape `(number of bounding boxes in the image, 4)` and the masks a
`torch.FloatTensor` of shape `(number of bounding boxes in the image, height, width)`.
Returns:
Examples:
```python
>>> import io
>>> import requests
>>> from PIL import Image
>>> import torch
>>> import numpy
>>> from transformers import (
... AutoImageProcessor,
... ConditionalDetrConfig,
... ConditionalDetrForSegmentation,
... )
>>> from transformers.image_transforms import rgb_to_id
>>> url = "http://images.cocodataset.org/val2017/000000039769.jpg"
>>> image = Image.open(requests.get(url, stream=True).raw)
>>> image_processor = AutoImageProcessor.from_pretrained("microsoft/conditional-detr-resnet-50")
>>> # randomly initialize all weights of the model
>>> config = ConditionalDetrConfig()
>>> model = ConditionalDetrForSegmentation(config)
>>> # prepare image for the model
>>> inputs = image_processor(images=image, return_tensors="pt")
>>> # forward pass
>>> outputs = model(**inputs)
>>> # Use the `post_process_panoptic_segmentation` method of the `image_processor` to retrieve post-processed panoptic segmentation maps
>>> # Segmentation results are returned as a list of dictionaries
>>> result = image_processor.post_process_panoptic_segmentation(outputs, target_sizes=[(300, 500)])
>>> # A tensor of shape (height, width) where each value denotes a segment id, filled with -1 if no segment is found
>>> panoptic_seg = result[0]["segmentation"]
>>> # Get prediction score and segment_id to class_id mapping of each segment
>>> panoptic_segments_info = result[0]["segments_info"]
```"""
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
batch_size, num_channels, height, width = pixel_values.shape
device = pixel_values.device
if pixel_mask is None:
pixel_mask = torch.ones((batch_size, height, width), device=device)
# First, get list of feature maps and position embeddings
features, position_embeddings_list = self.conditional_detr.model.backbone(pixel_values, pixel_mask=pixel_mask)
# Second, apply 1x1 convolution to reduce the channel dimension to d_model (256 by default)
feature_map, mask = features[-1]
batch_size, num_channels, height, width = feature_map.shape
projected_feature_map = self.conditional_detr.model.input_projection(feature_map)
# Third, flatten the feature map + position embeddings of shape NxCxHxW to NxCxHW, and permute it to NxHWxC
# In other words, turn their shape into (batch_size, sequence_length, hidden_size)
flattened_features = projected_feature_map.flatten(2).permute(0, 2, 1)
position_embeddings = position_embeddings_list[-1].flatten(2).permute(0, 2, 1)
flattened_mask = mask.flatten(1)
# Fourth, sent flattened_features + flattened_mask + position embeddings through encoder
# flattened_features is a Tensor of shape (batch_size, heigth*width, hidden_size)
# flattened_mask is a Tensor of shape (batch_size, heigth*width)
if encoder_outputs is None:
encoder_outputs = self.conditional_detr.model.encoder(
inputs_embeds=flattened_features,
attention_mask=flattened_mask,
position_embeddings=position_embeddings,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
# If the user passed a tuple for encoder_outputs, we wrap it in a BaseModelOutput when return_dict=True
elif return_dict and not isinstance(encoder_outputs, BaseModelOutput):
encoder_outputs = BaseModelOutput(
last_hidden_state=encoder_outputs[0],
hidden_states=encoder_outputs[1] if len(encoder_outputs) > 1 else None,
attentions=encoder_outputs[2] if len(encoder_outputs) > 2 else None,
)
# Fifth, sent query embeddings + position embeddings through the decoder (which is conditioned on the encoder output)
query_position_embeddings = self.conditional_detr.model.query_position_embeddings.weight.unsqueeze(0).repeat(
batch_size, 1, 1
)
queries = torch.zeros_like(query_position_embeddings)
# decoder outputs consists of (dec_features, dec_hidden, dec_attn)
decoder_outputs = self.conditional_detr.model.decoder(
inputs_embeds=queries,
attention_mask=None,
position_embeddings=position_embeddings,
query_position_embeddings=query_position_embeddings,
encoder_hidden_states=encoder_outputs[0],
encoder_attention_mask=flattened_mask,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
sequence_output = decoder_outputs[0]
# Sixth, compute logits, pred_boxes and pred_masks
logits = self.conditional_detr.class_labels_classifier(sequence_output)
pred_boxes = self.conditional_detr.bbox_predictor(sequence_output).sigmoid()
memory = encoder_outputs[0].permute(0, 2, 1).view(batch_size, self.config.d_model, height, width)
mask = flattened_mask.view(batch_size, height, width)
# FIXME h_boxes takes the last one computed, keep this in mind
# important: we need to reverse the mask, since in the original implementation the mask works reversed
# bbox_mask is of shape (batch_size, num_queries, number_of_attention_heads in bbox_attention, height/32, width/32)
bbox_mask = self.bbox_attention(sequence_output, memory, mask=~mask)
seg_masks = self.mask_head(projected_feature_map, bbox_mask, [features[2][0], features[1][0], features[0][0]])
pred_masks = seg_masks.view(
batch_size, self.conditional_detr.config.num_queries, seg_masks.shape[-2], seg_masks.shape[-1]
)
loss, loss_dict, auxiliary_outputs = None, None, None
if labels is not None:
# First: create the matcher
matcher = ConditionalDetrHungarianMatcher(
class_cost=self.config.class_cost, bbox_cost=self.config.bbox_cost, giou_cost=self.config.giou_cost
)
# Second: create the criterion
losses = ["labels", "boxes", "cardinality", "masks"]
criterion = ConditionalDetrLoss(
matcher=matcher,
num_classes=self.config.num_labels,
focal_alpha=self.config.focal_alpha,
losses=losses,
)
criterion.to(self.device)
# Third: compute the losses, based on outputs and labels
outputs_loss = {}
outputs_loss["logits"] = logits
outputs_loss["pred_boxes"] = pred_boxes
outputs_loss["pred_masks"] = pred_masks
if self.config.auxiliary_loss:
intermediate = decoder_outputs.intermediate_hidden_states if return_dict else decoder_outputs[-1]
outputs_class = self.class_labels_classifier(intermediate)
outputs_coord = self.bbox_predictor(intermediate).sigmoid()
auxiliary_outputs = self._set_aux_loss(outputs_class, outputs_coord)
outputs_loss["auxiliary_outputs"] = auxiliary_outputs
loss_dict = criterion(outputs_loss, labels)
# Fourth: compute total loss, as a weighted sum of the various losses
weight_dict = {"loss_ce": 1, "loss_bbox": self.config.bbox_loss_coefficient}
weight_dict["loss_giou"] = self.config.giou_loss_coefficient
weight_dict["loss_mask"] = self.config.mask_loss_coefficient
weight_dict["loss_dice"] = self.config.dice_loss_coefficient
if self.config.auxiliary_loss:
aux_weight_dict = {}
for i in range(self.config.decoder_layers - 1):
aux_weight_dict.update({k + f"_{i}": v for k, v in weight_dict.items()})
weight_dict.update(aux_weight_dict)
loss = sum(loss_dict[k] * weight_dict[k] for k in loss_dict.keys() if k in weight_dict)
if not return_dict:
if auxiliary_outputs is not None:
output = (logits, pred_boxes, pred_masks) + auxiliary_outputs + decoder_outputs + encoder_outputs
else:
output = (logits, pred_boxes, pred_masks) + decoder_outputs + encoder_outputs
return ((loss, loss_dict) + output) if loss is not None else output
return ConditionalDetrSegmentationOutput(
loss=loss,
loss_dict=loss_dict,
logits=logits,
pred_boxes=pred_boxes,
pred_masks=pred_masks,
auxiliary_outputs=auxiliary_outputs,
last_hidden_state=decoder_outputs.last_hidden_state,
decoder_hidden_states=decoder_outputs.hidden_states,
decoder_attentions=decoder_outputs.attentions,
cross_attentions=decoder_outputs.cross_attentions,
encoder_last_hidden_state=encoder_outputs.last_hidden_state,
encoder_hidden_states=encoder_outputs.hidden_states,
encoder_attentions=encoder_outputs.attentions,
)
def _expand(tensor, length: int):
return tensor.unsqueeze(1).repeat(1, int(length), 1, 1, 1).flatten(0, 1)
# Copied from transformers.models.detr.modeling_detr.DetrMaskHeadSmallConv with Detr->ConditionalDetr
class ConditionalDetrMaskHeadSmallConv(nn.Module):
"""
Simple convolutional head, using group norm. Upsampling is done using a FPN approach
"""
def __init__(self, dim, fpn_dims, context_dim):
super().__init__()
if dim % 8 != 0:
raise ValueError(
"The hidden_size + number of attention heads must be divisible by 8 as the number of groups in"
" GroupNorm is set to 8"
)
inter_dims = [dim, context_dim // 2, context_dim // 4, context_dim // 8, context_dim // 16, context_dim // 64]
self.lay1 = nn.Conv2d(dim, dim, 3, padding=1)
self.gn1 = nn.GroupNorm(8, dim)
self.lay2 = nn.Conv2d(dim, inter_dims[1], 3, padding=1)
self.gn2 = nn.GroupNorm(min(8, inter_dims[1]), inter_dims[1])
self.lay3 = nn.Conv2d(inter_dims[1], inter_dims[2], 3, padding=1)
self.gn3 = nn.GroupNorm(min(8, inter_dims[2]), inter_dims[2])
self.lay4 = nn.Conv2d(inter_dims[2], inter_dims[3], 3, padding=1)
self.gn4 = nn.GroupNorm(min(8, inter_dims[3]), inter_dims[3])
self.lay5 = nn.Conv2d(inter_dims[3], inter_dims[4], 3, padding=1)
self.gn5 = nn.GroupNorm(min(8, inter_dims[4]), inter_dims[4])
self.out_lay = nn.Conv2d(inter_dims[4], 1, 3, padding=1)
self.dim = dim
self.adapter1 = nn.Conv2d(fpn_dims[0], inter_dims[1], 1)
self.adapter2 = nn.Conv2d(fpn_dims[1], inter_dims[2], 1)
self.adapter3 = nn.Conv2d(fpn_dims[2], inter_dims[3], 1)
for m in self.modules():
if isinstance(m, nn.Conv2d):
nn.init.kaiming_uniform_(m.weight, a=1)
nn.init.constant_(m.bias, 0)
def forward(self, x: Tensor, bbox_mask: Tensor, fpns: List[Tensor]):
# here we concatenate x, the projected feature map, of shape (batch_size, d_model, heigth/32, width/32) with
# the bbox_mask = the attention maps of shape (batch_size, n_queries, n_heads, height/32, width/32).
# We expand the projected feature map to match the number of heads.
x = torch.cat([_expand(x, bbox_mask.shape[1]), bbox_mask.flatten(0, 1)], 1)
x = self.lay1(x)
x = self.gn1(x)
x = nn.functional.relu(x)
x = self.lay2(x)
x = self.gn2(x)
x = nn.functional.relu(x)
cur_fpn = self.adapter1(fpns[0])
if cur_fpn.size(0) != x.size(0):
cur_fpn = _expand(cur_fpn, x.size(0) // cur_fpn.size(0))
x = cur_fpn + nn.functional.interpolate(x, size=cur_fpn.shape[-2:], mode="nearest")
x = self.lay3(x)
x = self.gn3(x)
x = nn.functional.relu(x)
cur_fpn = self.adapter2(fpns[1])
if cur_fpn.size(0) != x.size(0):
cur_fpn = _expand(cur_fpn, x.size(0) // cur_fpn.size(0))
x = cur_fpn + nn.functional.interpolate(x, size=cur_fpn.shape[-2:], mode="nearest")
x = self.lay4(x)
x = self.gn4(x)
x = nn.functional.relu(x)
cur_fpn = self.adapter3(fpns[2])
if cur_fpn.size(0) != x.size(0):
cur_fpn = _expand(cur_fpn, x.size(0) // cur_fpn.size(0))
x = cur_fpn + nn.functional.interpolate(x, size=cur_fpn.shape[-2:], mode="nearest")
x = self.lay5(x)
x = self.gn5(x)
x = nn.functional.relu(x)
x = self.out_lay(x)
return x
# Copied from transformers.models.detr.modeling_detr.DetrMHAttentionMap with Detr->ConditionalDetr
class ConditionalDetrMHAttentionMap(nn.Module):
"""This is a 2D attention module, which only returns the attention softmax (no multiplication by value)"""
def __init__(self, query_dim, hidden_dim, num_heads, dropout=0.0, bias=True, std=None):
super().__init__()
self.num_heads = num_heads
self.hidden_dim = hidden_dim
self.dropout = nn.Dropout(dropout)
self.q_linear = nn.Linear(query_dim, hidden_dim, bias=bias)
self.k_linear = nn.Linear(query_dim, hidden_dim, bias=bias)
self.normalize_fact = float(hidden_dim / self.num_heads) ** -0.5
def forward(self, q, k, mask: Optional[Tensor] = None):
q = self.q_linear(q)
k = nn.functional.conv2d(k, self.k_linear.weight.unsqueeze(-1).unsqueeze(-1), self.k_linear.bias)
queries_per_head = q.view(q.shape[0], q.shape[1], self.num_heads, self.hidden_dim // self.num_heads)
keys_per_head = k.view(k.shape[0], self.num_heads, self.hidden_dim // self.num_heads, k.shape[-2], k.shape[-1])
weights = torch.einsum("bqnc,bnchw->bqnhw", queries_per_head * self.normalize_fact, keys_per_head)
if mask is not None:
weights.masked_fill_(mask.unsqueeze(1).unsqueeze(1), torch.finfo(weights.dtype).min)
weights = nn.functional.softmax(weights.flatten(2), dim=-1).view(weights.size())
weights = self.dropout(weights)
return weights
# Copied from transformers.models.detr.modeling_detr.dice_loss
def dice_loss(inputs, targets, num_boxes):
"""
Compute the DICE loss, similar to generalized IOU for masks
Args:
inputs: A float tensor of arbitrary shape.
The predictions for each example.
targets: A float tensor with the same shape as inputs. Stores the binary
classification label for each element in inputs (0 for the negative class and 1 for the positive
class).
"""
inputs = inputs.sigmoid()
inputs = inputs.flatten(1)
numerator = 2 * (inputs * targets).sum(1)
denominator = inputs.sum(-1) + targets.sum(-1)
loss = 1 - (numerator + 1) / (denominator + 1)
return loss.sum() / num_boxes
# Copied from transformers.models.detr.modeling_detr.sigmoid_focal_loss
def sigmoid_focal_loss(inputs, targets, num_boxes, alpha: float = 0.25, gamma: float = 2):
"""
Loss used in RetinaNet for dense detection: https://arxiv.org/abs/1708.02002.
Args:
inputs (`torch.FloatTensor` of arbitrary shape):
The predictions for each example.
targets (`torch.FloatTensor` with the same shape as `inputs`)
A tensor storing the binary classification label for each element in the `inputs` (0 for the negative class
and 1 for the positive class).
alpha (`float`, *optional*, defaults to `0.25`):
Optional weighting factor in the range (0,1) to balance positive vs. negative examples.
gamma (`int`, *optional*, defaults to `2`):
Exponent of the modulating factor (1 - p_t) to balance easy vs hard examples.
Returns:
Loss tensor
"""
prob = inputs.sigmoid()
ce_loss = nn.functional.binary_cross_entropy_with_logits(inputs, targets, reduction="none")
# add modulating factor
p_t = prob * targets + (1 - prob) * (1 - targets)
loss = ce_loss * ((1 - p_t) ** gamma)
if alpha >= 0:
alpha_t = alpha * targets + (1 - alpha) * (1 - targets)
loss = alpha_t * loss
return loss.mean(1).sum() / num_boxes
class ConditionalDetrLoss(nn.Module):
"""
This class computes the losses for ConditionalDetrForObjectDetection/ConditionalDetrForSegmentation. The process
happens in two steps: 1) we compute hungarian assignment between ground truth boxes and the outputs of the model 2)
we supervise each pair of matched ground-truth / prediction (supervise class and box).
Args:
matcher (`ConditionalDetrHungarianMatcher`):
Module able to compute a matching between targets and proposals.
num_classes (`int`):
Number of object categories, omitting the special no-object category.
focal_alpha (`float`):
Alpha parameter in focal loss.
losses (`List[str]`):
List of all the losses to be applied. See `get_loss` for a list of all available losses.
"""
# Copied from transformers.models.deformable_detr.modeling_deformable_detr.DeformableDetrLoss.__init__
def __init__(self, matcher, num_classes, focal_alpha, losses):
super().__init__()
self.matcher = matcher
self.num_classes = num_classes
self.focal_alpha = focal_alpha
self.losses = losses
# Copied from transformers.models.deformable_detr.modeling_deformable_detr.DeformableDetrLoss.loss_labels
def loss_labels(self, outputs, targets, indices, num_boxes):
"""
Classification loss (Binary focal loss) targets dicts must contain the key "class_labels" containing a tensor
of dim [nb_target_boxes]
"""
if "logits" not in outputs:
raise KeyError("No logits were found in the outputs")
source_logits = outputs["logits"]
idx = self._get_source_permutation_idx(indices)
target_classes_o = torch.cat([t["class_labels"][J] for t, (_, J) in zip(targets, indices)])
target_classes = torch.full(
source_logits.shape[:2], self.num_classes, dtype=torch.int64, device=source_logits.device
)
target_classes[idx] = target_classes_o
target_classes_onehot = torch.zeros(
[source_logits.shape[0], source_logits.shape[1], source_logits.shape[2] + 1],
dtype=source_logits.dtype,
layout=source_logits.layout,
device=source_logits.device,
)
target_classes_onehot.scatter_(2, target_classes.unsqueeze(-1), 1)
target_classes_onehot = target_classes_onehot[:, :, :-1]
loss_ce = (
sigmoid_focal_loss(source_logits, target_classes_onehot, num_boxes, alpha=self.focal_alpha, gamma=2)
* source_logits.shape[1]
)
losses = {"loss_ce": loss_ce}
return losses
@torch.no_grad()
# Copied from transformers.models.deformable_detr.modeling_deformable_detr.DeformableDetrLoss.loss_cardinality
def loss_cardinality(self, outputs, targets, indices, num_boxes):
"""
Compute the cardinality error, i.e. the absolute error in the number of predicted non-empty boxes.
This is not really a loss, it is intended for logging purposes only. It doesn't propagate gradients.
"""
logits = outputs["logits"]
device = logits.device
target_lengths = torch.as_tensor([len(v["class_labels"]) for v in targets], device=device)
# Count the number of predictions that are NOT "no-object" (which is the last class)
card_pred = (logits.argmax(-1) != logits.shape[-1] - 1).sum(1)
card_err = nn.functional.l1_loss(card_pred.float(), target_lengths.float())
losses = {"cardinality_error": card_err}
return losses
# Copied from transformers.models.deformable_detr.modeling_deformable_detr.DeformableDetrLoss.loss_boxes
def loss_boxes(self, outputs, targets, indices, num_boxes):
"""
Compute the losses related to the bounding boxes, the L1 regression loss and the GIoU loss.
Targets dicts must contain the key "boxes" containing a tensor of dim [nb_target_boxes, 4]. The target boxes
are expected in format (center_x, center_y, w, h), normalized by the image size.
"""
if "pred_boxes" not in outputs:
raise KeyError("No predicted boxes found in outputs")
idx = self._get_source_permutation_idx(indices)
source_boxes = outputs["pred_boxes"][idx]
target_boxes = torch.cat([t["boxes"][i] for t, (_, i) in zip(targets, indices)], dim=0)
loss_bbox = nn.functional.l1_loss(source_boxes, target_boxes, reduction="none")
losses = {}
losses["loss_bbox"] = loss_bbox.sum() / num_boxes
loss_giou = 1 - torch.diag(
generalized_box_iou(center_to_corners_format(source_boxes), center_to_corners_format(target_boxes))
)
losses["loss_giou"] = loss_giou.sum() / num_boxes
return losses
# Copied from transformers.models.detr.modeling_detr.DetrLoss.loss_masks
def loss_masks(self, outputs, targets, indices, num_boxes):
"""
Compute the losses related to the masks: the focal loss and the dice loss.
Targets dicts must contain the key "masks" containing a tensor of dim [nb_target_boxes, h, w].
"""
if "pred_masks" not in outputs:
raise KeyError("No predicted masks found in outputs")
source_idx = self._get_source_permutation_idx(indices)
target_idx = self._get_target_permutation_idx(indices)
source_masks = outputs["pred_masks"]
source_masks = source_masks[source_idx]
masks = [t["masks"] for t in targets]
# TODO use valid to mask invalid areas due to padding in loss
target_masks, valid = nested_tensor_from_tensor_list(masks).decompose()
target_masks = target_masks.to(source_masks)
target_masks = target_masks[target_idx]
# upsample predictions to the target size
source_masks = nn.functional.interpolate(
source_masks[:, None], size=target_masks.shape[-2:], mode="bilinear", align_corners=False
)
source_masks = source_masks[:, 0].flatten(1)
target_masks = target_masks.flatten(1)
target_masks = target_masks.view(source_masks.shape)
losses = {
"loss_mask": sigmoid_focal_loss(source_masks, target_masks, num_boxes),
"loss_dice": dice_loss(source_masks, target_masks, num_boxes),
}
return losses
# Copied from transformers.models.deformable_detr.modeling_deformable_detr.DeformableDetrLoss._get_source_permutation_idx
def _get_source_permutation_idx(self, indices):
# permute predictions following indices
batch_idx = torch.cat([torch.full_like(source, i) for i, (source, _) in enumerate(indices)])
source_idx = torch.cat([source for (source, _) in indices])
return batch_idx, source_idx
# Copied from transformers.models.deformable_detr.modeling_deformable_detr.DeformableDetrLoss._get_target_permutation_idx
def _get_target_permutation_idx(self, indices):
# permute targets following indices
batch_idx = torch.cat([torch.full_like(target, i) for i, (_, target) in enumerate(indices)])
target_idx = torch.cat([target for (_, target) in indices])
return batch_idx, target_idx
# Copied from transformers.models.detr.modeling_detr.DetrLoss.get_loss
def get_loss(self, loss, outputs, targets, indices, num_boxes):
loss_map = {
"labels": self.loss_labels,
"cardinality": self.loss_cardinality,
"boxes": self.loss_boxes,
"masks": self.loss_masks,
}
if loss not in loss_map:
raise ValueError(f"Loss {loss} not supported")
return loss_map[loss](outputs, targets, indices, num_boxes)
# Copied from transformers.models.detr.modeling_detr.DetrLoss.forward
def forward(self, outputs, targets):
"""
This performs the loss computation.
Args:
outputs (`dict`, *optional*):
Dictionary of tensors, see the output specification of the model for the format.
targets (`List[dict]`, *optional*):
List of dicts, such that `len(targets) == batch_size`. The expected keys in each dict depends on the
losses applied, see each loss' doc.
"""
outputs_without_aux = {k: v for k, v in outputs.items() if k != "auxiliary_outputs"}
# Retrieve the matching between the outputs of the last layer and the targets
indices = self.matcher(outputs_without_aux, targets)
# Compute the average number of target boxes across all nodes, for normalization purposes
num_boxes = sum(len(t["class_labels"]) for t in targets)
num_boxes = torch.as_tensor([num_boxes], dtype=torch.float, device=next(iter(outputs.values())).device)
# (Niels): comment out function below, distributed training to be added
# if is_dist_avail_and_initialized():
# torch.distributed.all_reduce(num_boxes)
# (Niels) in original implementation, num_boxes is divided by get_world_size()
num_boxes = torch.clamp(num_boxes, min=1).item()
# Compute all the requested losses
losses = {}
for loss in self.losses:
losses.update(self.get_loss(loss, outputs, targets, indices, num_boxes))
# In case of auxiliary losses, we repeat this process with the output of each intermediate layer.
if "auxiliary_outputs" in outputs:
for i, auxiliary_outputs in enumerate(outputs["auxiliary_outputs"]):
indices = self.matcher(auxiliary_outputs, targets)
for loss in self.losses:
if loss == "masks":
# Intermediate masks losses are too costly to compute, we ignore them.
continue
l_dict = self.get_loss(loss, auxiliary_outputs, targets, indices, num_boxes)
l_dict = {k + f"_{i}": v for k, v in l_dict.items()}
losses.update(l_dict)
return losses
# Copied from transformers.models.detr.modeling_detr.DetrMLPPredictionHead with Detr->ConditionalDetr
class ConditionalDetrMLPPredictionHead(nn.Module):
"""
Very simple multi-layer perceptron (MLP, also called FFN), used to predict the normalized center coordinates,
height and width of a bounding box w.r.t. an image.
Copied from https://github.com/facebookresearch/detr/blob/master/models/detr.py
"""
def __init__(self, input_dim, hidden_dim, output_dim, num_layers):
super().__init__()
self.num_layers = num_layers
h = [hidden_dim] * (num_layers - 1)
self.layers = nn.ModuleList(nn.Linear(n, k) for n, k in zip([input_dim] + h, h + [output_dim]))
def forward(self, x):
for i, layer in enumerate(self.layers):
x = nn.functional.relu(layer(x)) if i < self.num_layers - 1 else layer(x)
return x
# Copied from transformers.models.deformable_detr.modeling_deformable_detr.DeformableDetrHungarianMatcher with DeformableDetr->ConditionalDetr
class ConditionalDetrHungarianMatcher(nn.Module):
"""
This class computes an assignment between the targets and the predictions of the network.
For efficiency reasons, the targets don't include the no_object. Because of this, in general, there are more
predictions than targets. In this case, we do a 1-to-1 matching of the best predictions, while the others are
un-matched (and thus treated as non-objects).
Args:
class_cost:
The relative weight of the classification error in the matching cost.
bbox_cost:
The relative weight of the L1 error of the bounding box coordinates in the matching cost.
giou_cost:
The relative weight of the giou loss of the bounding box in the matching cost.
"""
def __init__(self, class_cost: float = 1, bbox_cost: float = 1, giou_cost: float = 1):
super().__init__()
requires_backends(self, ["scipy"])
self.class_cost = class_cost
self.bbox_cost = bbox_cost
self.giou_cost = giou_cost
if class_cost == 0 and bbox_cost == 0 and giou_cost == 0:
raise ValueError("All costs of the Matcher can't be 0")
@torch.no_grad()
def forward(self, outputs, targets):
"""
Args:
outputs (`dict`):
A dictionary that contains at least these entries:
* "logits": Tensor of dim [batch_size, num_queries, num_classes] with the classification logits
* "pred_boxes": Tensor of dim [batch_size, num_queries, 4] with the predicted box coordinates.
targets (`List[dict]`):
A list of targets (len(targets) = batch_size), where each target is a dict containing:
* "class_labels": Tensor of dim [num_target_boxes] (where num_target_boxes is the number of
ground-truth
objects in the target) containing the class labels
* "boxes": Tensor of dim [num_target_boxes, 4] containing the target box coordinates.
Returns:
`List[Tuple]`: A list of size `batch_size`, containing tuples of (index_i, index_j) where:
- index_i is the indices of the selected predictions (in order)
- index_j is the indices of the corresponding selected targets (in order)
For each batch element, it holds: len(index_i) = len(index_j) = min(num_queries, num_target_boxes)
"""
batch_size, num_queries = outputs["logits"].shape[:2]
# We flatten to compute the cost matrices in a batch
out_prob = outputs["logits"].flatten(0, 1).sigmoid() # [batch_size * num_queries, num_classes]
out_bbox = outputs["pred_boxes"].flatten(0, 1) # [batch_size * num_queries, 4]
# Also concat the target labels and boxes
target_ids = torch.cat([v["class_labels"] for v in targets])
target_bbox = torch.cat([v["boxes"] for v in targets])
# Compute the classification cost.
alpha = 0.25
gamma = 2.0
neg_cost_class = (1 - alpha) * (out_prob**gamma) * (-(1 - out_prob + 1e-8).log())
pos_cost_class = alpha * ((1 - out_prob) ** gamma) * (-(out_prob + 1e-8).log())
class_cost = pos_cost_class[:, target_ids] - neg_cost_class[:, target_ids]
# Compute the L1 cost between boxes
bbox_cost = torch.cdist(out_bbox, target_bbox, p=1)
# Compute the giou cost between boxes
giou_cost = -generalized_box_iou(center_to_corners_format(out_bbox), center_to_corners_format(target_bbox))
# Final cost matrix
cost_matrix = self.bbox_cost * bbox_cost + self.class_cost * class_cost + self.giou_cost * giou_cost
cost_matrix = cost_matrix.view(batch_size, num_queries, -1).cpu()
sizes = [len(v["boxes"]) for v in targets]
indices = [linear_sum_assignment(c[i]) for i, c in enumerate(cost_matrix.split(sizes, -1))]
return [(torch.as_tensor(i, dtype=torch.int64), torch.as_tensor(j, dtype=torch.int64)) for i, j in indices]
# Copied from transformers.models.detr.modeling_detr._upcast
def _upcast(t: Tensor) -> Tensor:
# Protects from numerical overflows in multiplications by upcasting to the equivalent higher type
if t.is_floating_point():
return t if t.dtype in (torch.float32, torch.float64) else t.float()
else:
return t if t.dtype in (torch.int32, torch.int64) else t.int()
# Copied from transformers.models.detr.modeling_detr.box_area
def box_area(boxes: Tensor) -> Tensor:
"""
Computes the area of a set of bounding boxes, which are specified by its (x1, y1, x2, y2) coordinates.
Args:
boxes (`torch.FloatTensor` of shape `(number_of_boxes, 4)`):
Boxes for which the area will be computed. They are expected to be in (x1, y1, x2, y2) format with `0 <= x1
< x2` and `0 <= y1 < y2`.
Returns:
`torch.FloatTensor`: a tensor containing the area for each box.
"""
boxes = _upcast(boxes)
return (boxes[:, 2] - boxes[:, 0]) * (boxes[:, 3] - boxes[:, 1])
# Copied from transformers.models.detr.modeling_detr.box_iou
def box_iou(boxes1, boxes2):
area1 = box_area(boxes1)
area2 = box_area(boxes2)
left_top = torch.max(boxes1[:, None, :2], boxes2[:, :2]) # [N,M,2]
right_bottom = torch.min(boxes1[:, None, 2:], boxes2[:, 2:]) # [N,M,2]
width_height = (right_bottom - left_top).clamp(min=0) # [N,M,2]
inter = width_height[:, :, 0] * width_height[:, :, 1] # [N,M]
union = area1[:, None] + area2 - inter
iou = inter / union
return iou, union
# Copied from transformers.models.detr.modeling_detr.generalized_box_iou
def generalized_box_iou(boxes1, boxes2):
"""
Generalized IoU from https://giou.stanford.edu/. The boxes should be in [x0, y0, x1, y1] (corner) format.
Returns:
`torch.FloatTensor`: a [N, M] pairwise matrix, where N = len(boxes1) and M = len(boxes2)
"""
# degenerate boxes gives inf / nan results
# so do an early check
if not (boxes1[:, 2:] >= boxes1[:, :2]).all():
raise ValueError(f"boxes1 must be in [x0, y0, x1, y1] (corner) format, but got {boxes1}")
if not (boxes2[:, 2:] >= boxes2[:, :2]).all():
raise ValueError(f"boxes2 must be in [x0, y0, x1, y1] (corner) format, but got {boxes2}")
iou, union = box_iou(boxes1, boxes2)
top_left = torch.min(boxes1[:, None, :2], boxes2[:, :2])
bottom_right = torch.max(boxes1[:, None, 2:], boxes2[:, 2:])
width_height = (bottom_right - top_left).clamp(min=0) # [N,M,2]
area = width_height[:, :, 0] * width_height[:, :, 1]
return iou - (area - union) / area
# Copied from transformers.models.detr.modeling_detr._max_by_axis
def _max_by_axis(the_list):
# type: (List[List[int]]) -> List[int]
maxes = the_list[0]
for sublist in the_list[1:]:
for index, item in enumerate(sublist):
maxes[index] = max(maxes[index], item)
return maxes
# Copied from transformers.models.detr.modeling_detr.NestedTensor
class NestedTensor(object):
def __init__(self, tensors, mask: Optional[Tensor]):
self.tensors = tensors
self.mask = mask
def to(self, device):
cast_tensor = self.tensors.to(device)
mask = self.mask
if mask is not None:
cast_mask = mask.to(device)
else:
cast_mask = None
return NestedTensor(cast_tensor, cast_mask)
def decompose(self):
return self.tensors, self.mask
def __repr__(self):
return str(self.tensors)
# Copied from transformers.models.detr.modeling_detr.nested_tensor_from_tensor_list
def nested_tensor_from_tensor_list(tensor_list: List[Tensor]):
if tensor_list[0].ndim == 3:
max_size = _max_by_axis([list(img.shape) for img in tensor_list])
batch_shape = [len(tensor_list)] + max_size
batch_size, num_channels, height, width = batch_shape
dtype = tensor_list[0].dtype
device = tensor_list[0].device
tensor = torch.zeros(batch_shape, dtype=dtype, device=device)
mask = torch.ones((batch_size, height, width), dtype=torch.bool, device=device)
for img, pad_img, m in zip(tensor_list, tensor, mask):
pad_img[: img.shape[0], : img.shape[1], : img.shape[2]].copy_(img)
m[: img.shape[1], : img.shape[2]] = False
else:
raise ValueError("Only 3-dimensional tensors are supported")
return NestedTensor(tensor, mask)
| 127,751 | 46.936961 | 194 | py |
transformers | transformers-main/src/transformers/models/conditional_detr/__init__.py | # Copyright 2022 The HuggingFace Team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
from typing import TYPE_CHECKING
from ...utils import OptionalDependencyNotAvailable, _LazyModule, is_torch_available, is_vision_available
_import_structure = {
"configuration_conditional_detr": [
"CONDITIONAL_DETR_PRETRAINED_CONFIG_ARCHIVE_MAP",
"ConditionalDetrConfig",
"ConditionalDetrOnnxConfig",
]
}
try:
if not is_vision_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
_import_structure["feature_extraction_conditional_detr"] = ["ConditionalDetrFeatureExtractor"]
_import_structure["image_processing_conditional_detr"] = ["ConditionalDetrImageProcessor"]
try:
if not is_torch_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
_import_structure["modeling_conditional_detr"] = [
"CONDITIONAL_DETR_PRETRAINED_MODEL_ARCHIVE_LIST",
"ConditionalDetrForObjectDetection",
"ConditionalDetrForSegmentation",
"ConditionalDetrModel",
"ConditionalDetrPreTrainedModel",
]
if TYPE_CHECKING:
from .configuration_conditional_detr import (
CONDITIONAL_DETR_PRETRAINED_CONFIG_ARCHIVE_MAP,
ConditionalDetrConfig,
ConditionalDetrOnnxConfig,
)
try:
if not is_vision_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
from .feature_extraction_conditional_detr import ConditionalDetrFeatureExtractor
from .image_processing_conditional_detr import ConditionalDetrImageProcessor
try:
if not is_torch_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
from .modeling_conditional_detr import (
CONDITIONAL_DETR_PRETRAINED_MODEL_ARCHIVE_LIST,
ConditionalDetrForObjectDetection,
ConditionalDetrForSegmentation,
ConditionalDetrModel,
ConditionalDetrPreTrainedModel,
)
else:
import sys
sys.modules[__name__] = _LazyModule(__name__, globals()["__file__"], _import_structure, module_spec=__spec__)
| 2,828 | 31.895349 | 113 | py |
transformers | transformers-main/src/transformers/models/beit/modeling_beit.py | # coding=utf-8
# Copyright 2021 Microsoft Research and The HuggingFace Inc. team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
""" PyTorch BEiT model."""
import collections.abc
import math
from dataclasses import dataclass
from typing import List, Optional, Tuple, Union
import torch
import torch.utils.checkpoint
from torch import nn
from torch.nn import BCEWithLogitsLoss, CrossEntropyLoss, MSELoss
from ...activations import ACT2FN
from ...modeling_outputs import (
BaseModelOutput,
BaseModelOutputWithPooling,
ImageClassifierOutput,
MaskedLMOutput,
SemanticSegmenterOutput,
)
from ...modeling_utils import PreTrainedModel
from ...pytorch_utils import find_pruneable_heads_and_indices, meshgrid, prune_linear_layer
from ...utils import (
add_code_sample_docstrings,
add_start_docstrings,
add_start_docstrings_to_model_forward,
logging,
replace_return_docstrings,
)
from .configuration_beit import BeitConfig
logger = logging.get_logger(__name__)
# General docstring
_CONFIG_FOR_DOC = "BeitConfig"
# Base docstring
_CHECKPOINT_FOR_DOC = "microsoft/beit-base-patch16-224-pt22k"
_EXPECTED_OUTPUT_SHAPE = [1, 197, 768]
# Image classification docstring
_IMAGE_CLASS_CHECKPOINT = "microsoft/beit-base-patch16-224"
_IMAGE_CLASS_EXPECTED_OUTPUT = "tabby, tabby cat"
BEIT_PRETRAINED_MODEL_ARCHIVE_LIST = [
"microsoft/beit-base-patch16-224",
# See all BEiT models at https://huggingface.co/models?filter=beit
]
@dataclass
class BeitModelOutputWithPooling(BaseModelOutputWithPooling):
"""
Class for outputs of [`BeitModel`].
Args:
last_hidden_state (`torch.FloatTensor` of shape `(batch_size, sequence_length, hidden_size)`):
Sequence of hidden-states at the output of the last layer of the model.
pooler_output (`torch.FloatTensor` of shape `(batch_size, hidden_size)`):
Average of the last layer hidden states of the patch tokens (excluding the *[CLS]* token) if
*config.use_mean_pooling* is set to True. If set to False, then the final hidden state of the *[CLS]* token
will be returned.
hidden_states (`tuple(torch.FloatTensor)`, *optional*, returned when `output_hidden_states=True` is passed or when `config.output_hidden_states=True`):
Tuple of `torch.FloatTensor` (one for the output of the embeddings + one for the output of each layer) of
shape `(batch_size, sequence_length, hidden_size)`.
Hidden-states of the model at the output of each layer plus the initial embedding outputs.
attentions (`tuple(torch.FloatTensor)`, *optional*, returned when `output_attentions=True` is passed or when `config.output_attentions=True`):
Tuple of `torch.FloatTensor` (one for each layer) of shape `(batch_size, num_heads, sequence_length,
sequence_length)`.
Attentions weights after the attention softmax, used to compute the weighted average in the self-attention
heads.
"""
def drop_path(input: torch.Tensor, drop_prob: float = 0.0, training: bool = False) -> torch.Tensor:
"""
Drop paths (Stochastic Depth) per sample (when applied in main path of residual blocks).
Comment by Ross Wightman: This is the same as the DropConnect impl I created for EfficientNet, etc networks,
however, the original name is misleading as 'Drop Connect' is a different form of dropout in a separate paper...
See discussion: https://github.com/tensorflow/tpu/issues/494#issuecomment-532968956 ... I've opted for changing the
layer and argument names to 'drop path' rather than mix DropConnect as a layer name and use 'survival rate' as the
argument.
"""
if drop_prob == 0.0 or not training:
return input
keep_prob = 1 - drop_prob
shape = (input.shape[0],) + (1,) * (input.ndim - 1) # work with diff dim tensors, not just 2D ConvNets
random_tensor = keep_prob + torch.rand(shape, dtype=input.dtype, device=input.device)
random_tensor.floor_() # binarize
output = input.div(keep_prob) * random_tensor
return output
class BeitDropPath(nn.Module):
"""Drop paths (Stochastic Depth) per sample (when applied in main path of residual blocks)."""
def __init__(self, drop_prob: Optional[float] = None) -> None:
super().__init__()
self.drop_prob = drop_prob
def forward(self, hidden_states: torch.Tensor) -> torch.Tensor:
return drop_path(hidden_states, self.drop_prob, self.training)
def extra_repr(self) -> str:
return "p={}".format(self.drop_prob)
# Based on timm implementation, which can be found here:
# https://github.com/rwightman/pytorch-image-models/blob/master/timm/models/vision_transformer.py
class BeitEmbeddings(nn.Module):
"""
Construct the CLS token, position and patch embeddings. Optionally, also the mask token.
"""
def __init__(self, config: BeitConfig) -> None:
super().__init__()
self.cls_token = nn.Parameter(torch.zeros(1, 1, config.hidden_size))
if config.use_mask_token:
self.mask_token = nn.Parameter(torch.zeros(1, 1, config.hidden_size))
else:
self.mask_token = None
self.patch_embeddings = BeitPatchEmbeddings(config)
num_patches = self.patch_embeddings.num_patches
if config.use_absolute_position_embeddings:
self.position_embeddings = nn.Parameter(torch.zeros(1, num_patches + 1, config.hidden_size))
else:
self.position_embeddings = None
self.dropout = nn.Dropout(config.hidden_dropout_prob)
def forward(self, pixel_values: torch.Tensor, bool_masked_pos: Optional[torch.BoolTensor] = None) -> torch.Tensor:
embeddings = self.patch_embeddings(pixel_values)
batch_size, seq_len, _ = embeddings.size()
cls_tokens = self.cls_token.expand(batch_size, -1, -1)
if bool_masked_pos is not None:
mask_tokens = self.mask_token.expand(batch_size, seq_len, -1)
# replace the masked visual tokens by mask_tokens
w = bool_masked_pos.unsqueeze(-1).type_as(mask_tokens)
embeddings = embeddings * (1 - w) + mask_tokens * w
embeddings = torch.cat((cls_tokens, embeddings), dim=1)
if self.position_embeddings is not None:
embeddings = embeddings + self.position_embeddings
embeddings = self.dropout(embeddings)
return embeddings
class BeitPatchEmbeddings(nn.Module):
"""
This class turns `pixel_values` of shape `(batch_size, num_channels, height, width)` into the initial
`hidden_states` (patch embeddings) of shape `(batch_size, seq_length, hidden_size)` to be consumed by a
Transformer.
"""
def __init__(self, config):
super().__init__()
image_size, patch_size = config.image_size, config.patch_size
num_channels, hidden_size = config.num_channels, config.hidden_size
image_size = image_size if isinstance(image_size, collections.abc.Iterable) else (image_size, image_size)
patch_size = patch_size if isinstance(patch_size, collections.abc.Iterable) else (patch_size, patch_size)
num_patches = (image_size[1] // patch_size[1]) * (image_size[0] // patch_size[0])
patch_shape = (image_size[0] // patch_size[0], image_size[1] // patch_size[1])
self.image_size = image_size
self.patch_size = patch_size
self.num_channels = num_channels
self.num_patches = num_patches
self.patch_shape = patch_shape
self.projection = nn.Conv2d(num_channels, hidden_size, kernel_size=patch_size, stride=patch_size)
def forward(self, pixel_values: torch.Tensor) -> torch.Tensor:
batch_size, num_channels, height, width = pixel_values.shape
if num_channels != self.num_channels:
raise ValueError(
"Make sure that the channel dimension of the pixel values match with the one set in the configuration."
)
if height != self.image_size[0] or width != self.image_size[1]:
raise ValueError(
f"Input image size ({height}*{width}) doesn't match model ({self.image_size[0]}*{self.image_size[1]})."
)
embeddings = self.projection(pixel_values).flatten(2).transpose(1, 2)
return embeddings
class BeitSelfAttention(nn.Module):
def __init__(self, config: BeitConfig, window_size: Optional[tuple] = None) -> None:
super().__init__()
if config.hidden_size % config.num_attention_heads != 0 and not hasattr(config, "embedding_size"):
raise ValueError(
f"The hidden size {config.hidden_size,} is not a multiple of the number of attention "
f"heads {config.num_attention_heads}."
)
self.num_attention_heads = config.num_attention_heads
self.attention_head_size = int(config.hidden_size / config.num_attention_heads)
self.all_head_size = self.num_attention_heads * self.attention_head_size
self.query = nn.Linear(config.hidden_size, self.all_head_size)
self.key = nn.Linear(config.hidden_size, self.all_head_size, bias=False)
self.value = nn.Linear(config.hidden_size, self.all_head_size)
self.dropout = nn.Dropout(config.attention_probs_dropout_prob)
if window_size:
self.relative_position_bias = BeitRelativePositionBias(config, window_size=window_size)
else:
self.relative_position_bias = None
def transpose_for_scores(self, x):
new_x_shape = x.size()[:-1] + (self.num_attention_heads, self.attention_head_size)
x = x.view(*new_x_shape)
return x.permute(0, 2, 1, 3)
def forward(
self,
hidden_states: torch.Tensor,
head_mask: Optional[torch.Tensor] = None,
output_attentions: bool = False,
relative_position_bias: Optional["BeitRelativePositionBias"] = None,
) -> Union[Tuple[torch.Tensor], Tuple[torch.Tensor, torch.Tensor]]:
mixed_query_layer = self.query(hidden_states)
key_layer = self.transpose_for_scores(self.key(hidden_states))
value_layer = self.transpose_for_scores(self.value(hidden_states))
query_layer = self.transpose_for_scores(mixed_query_layer)
# Take the dot product between "query" and "key" to get the raw attention scores.
attention_scores = torch.matmul(query_layer, key_layer.transpose(-1, -2))
attention_scores = attention_scores / math.sqrt(self.attention_head_size)
# Add relative position bias if present.
if self.relative_position_bias is not None:
attention_scores = attention_scores + self.relative_position_bias().unsqueeze(0)
# Add shared relative position bias if provided.
if relative_position_bias is not None:
attention_scores = attention_scores + relative_position_bias
# Normalize the attention scores to probabilities.
attention_probs = nn.functional.softmax(attention_scores, dim=-1)
# This is actually dropping out entire tokens to attend to, which might
# seem a bit unusual, but is taken from the original Transformer paper.
attention_probs = self.dropout(attention_probs)
# Mask heads if we want to
if head_mask is not None:
attention_probs = attention_probs * head_mask
context_layer = torch.matmul(attention_probs, value_layer)
context_layer = context_layer.permute(0, 2, 1, 3).contiguous()
new_context_layer_shape = context_layer.size()[:-2] + (self.all_head_size,)
context_layer = context_layer.view(*new_context_layer_shape)
outputs = (context_layer, attention_probs) if output_attentions else (context_layer,)
return outputs
class BeitSelfOutput(nn.Module):
"""
The residual connection is defined in BeitLayer instead of here (as is the case with other models), due to the
layernorm applied before each block.
"""
def __init__(self, config: BeitConfig) -> None:
super().__init__()
self.dense = nn.Linear(config.hidden_size, config.hidden_size)
self.dropout = nn.Dropout(config.hidden_dropout_prob)
def forward(self, hidden_states: torch.Tensor, input_tensor: torch.Tensor, gamma=None) -> torch.Tensor:
hidden_states = self.dense(hidden_states)
hidden_states = self.dropout(hidden_states)
return hidden_states
class BeitAttention(nn.Module):
def __init__(self, config: BeitConfig, window_size: Optional[tuple] = None) -> None:
super().__init__()
self.attention = BeitSelfAttention(config, window_size=window_size)
self.output = BeitSelfOutput(config)
self.pruned_heads = set()
def prune_heads(self, heads):
if len(heads) == 0:
return
heads, index = find_pruneable_heads_and_indices(
heads, self.attention.num_attention_heads, self.attention.attention_head_size, self.pruned_heads
)
# Prune linear layers
self.attention.query = prune_linear_layer(self.attention.query, index)
self.attention.key = prune_linear_layer(self.attention.key, index)
self.attention.value = prune_linear_layer(self.attention.value, index)
self.output.dense = prune_linear_layer(self.output.dense, index, dim=1)
# Update hyper params and store pruned heads
self.attention.num_attention_heads = self.attention.num_attention_heads - len(heads)
self.attention.all_head_size = self.attention.attention_head_size * self.attention.num_attention_heads
self.pruned_heads = self.pruned_heads.union(heads)
def forward(
self,
hidden_states: torch.Tensor,
head_mask: Optional[torch.Tensor] = None,
output_attentions: bool = False,
relative_position_bias: Optional["BeitRelativePositionBias"] = None,
) -> Union[Tuple[torch.Tensor], Tuple[torch.Tensor, torch.Tensor]]:
self_outputs = self.attention(hidden_states, head_mask, output_attentions, relative_position_bias)
attention_output = self.output(self_outputs[0], hidden_states)
outputs = (attention_output,) + self_outputs[1:] # add attentions if we output them
return outputs
class BeitIntermediate(nn.Module):
def __init__(self, config: BeitConfig) -> None:
super().__init__()
self.dense = nn.Linear(config.hidden_size, config.intermediate_size)
if isinstance(config.hidden_act, str):
self.intermediate_act_fn = ACT2FN[config.hidden_act]
else:
self.intermediate_act_fn = config.hidden_act
def forward(self, hidden_states: torch.Tensor) -> torch.Tensor:
hidden_states = self.dense(hidden_states)
hidden_states = self.intermediate_act_fn(hidden_states)
return hidden_states
class BeitOutput(nn.Module):
def __init__(self, config: BeitConfig) -> None:
super().__init__()
self.dense = nn.Linear(config.intermediate_size, config.hidden_size)
self.dropout = nn.Dropout(config.hidden_dropout_prob)
def forward(self, hidden_states: torch.Tensor) -> torch.Tensor:
hidden_states = self.dense(hidden_states)
hidden_states = self.dropout(hidden_states)
return hidden_states
class BeitLayer(nn.Module):
"""This corresponds to the Block class in the timm implementation."""
def __init__(self, config: BeitConfig, window_size: Optional[tuple] = None, drop_path_rate: float = 0.0) -> None:
super().__init__()
self.chunk_size_feed_forward = config.chunk_size_feed_forward
self.seq_len_dim = 1
self.attention = BeitAttention(config, window_size=window_size)
self.intermediate = BeitIntermediate(config)
self.output = BeitOutput(config)
self.layernorm_before = nn.LayerNorm(config.hidden_size, eps=config.layer_norm_eps)
self.drop_path = BeitDropPath(drop_path_rate) if drop_path_rate > 0.0 else nn.Identity()
self.layernorm_after = nn.LayerNorm(config.hidden_size, eps=config.layer_norm_eps)
init_values = config.layer_scale_init_value
if init_values > 0:
self.lambda_1 = nn.Parameter(init_values * torch.ones((config.hidden_size)), requires_grad=True)
self.lambda_2 = nn.Parameter(init_values * torch.ones((config.hidden_size)), requires_grad=True)
else:
self.lambda_1, self.lambda_2 = None, None
def forward(
self,
hidden_states: torch.Tensor,
head_mask: Optional[torch.Tensor] = None,
output_attentions: bool = False,
relative_position_bias: Optional["BeitRelativePositionBias"] = None,
) -> Union[Tuple[torch.Tensor], Tuple[torch.Tensor, torch.Tensor]]:
self_attention_outputs = self.attention(
self.layernorm_before(hidden_states), # in BEiT, layernorm is applied before self-attention
head_mask,
output_attentions=output_attentions,
relative_position_bias=relative_position_bias,
)
attention_output = self_attention_outputs[0]
outputs = self_attention_outputs[1:] # add self attentions if we output attention weights
# apply lambda_1 if present
if self.lambda_1 is not None:
attention_output = self.lambda_1 * attention_output
# first residual connection
hidden_states = self.drop_path(attention_output) + hidden_states
# in BEiT, layernorm is also applied after self-attention
layer_output = self.layernorm_after(hidden_states)
layer_output = self.intermediate(layer_output)
layer_output = self.output(layer_output)
if self.lambda_2 is not None:
layer_output = self.lambda_2 * layer_output
# second residual connection
layer_output = self.drop_path(layer_output) + hidden_states
outputs = (layer_output,) + outputs
return outputs
class BeitRelativePositionBias(nn.Module):
def __init__(self, config: BeitConfig, window_size: tuple) -> None:
super().__init__()
self.window_size = window_size
self.num_relative_distance = (2 * window_size[0] - 1) * (2 * window_size[1] - 1) + 3
self.relative_position_bias_table = nn.Parameter(
torch.zeros(self.num_relative_distance, config.num_attention_heads)
) # 2*Wh-1 * 2*Ww-1, nH
# cls to token & token 2 cls & cls to cls
# get pair-wise relative position index for each token inside the window
coords_h = torch.arange(window_size[0])
coords_w = torch.arange(window_size[1])
coords = torch.stack(meshgrid([coords_h, coords_w], indexing="ij")) # 2, Wh, Ww
coords_flatten = torch.flatten(coords, 1) # 2, Wh*Ww
relative_coords = coords_flatten[:, :, None] - coords_flatten[:, None, :] # 2, Wh*Ww, Wh*Ww
relative_coords = relative_coords.permute(1, 2, 0).contiguous() # Wh*Ww, Wh*Ww, 2
relative_coords[:, :, 0] += window_size[0] - 1 # shift to start from 0
relative_coords[:, :, 1] += window_size[1] - 1
relative_coords[:, :, 0] *= 2 * window_size[1] - 1
relative_position_index = torch.zeros(
size=(window_size[0] * window_size[1] + 1,) * 2, dtype=relative_coords.dtype
)
relative_position_index[1:, 1:] = relative_coords.sum(-1) # Wh*Ww, Wh*Ww
relative_position_index[0, 0:] = self.num_relative_distance - 3
relative_position_index[0:, 0] = self.num_relative_distance - 2
relative_position_index[0, 0] = self.num_relative_distance - 1
self.register_buffer("relative_position_index", relative_position_index, persistent=False)
def forward(self) -> torch.Tensor:
relative_position_bias = self.relative_position_bias_table[self.relative_position_index.view(-1)].view(
self.window_size[0] * self.window_size[1] + 1, self.window_size[0] * self.window_size[1] + 1, -1
) # Wh*Ww,Wh*Ww,nH
return relative_position_bias.permute(2, 0, 1).contiguous() # nH, Wh*Ww, Wh*Ww
class BeitEncoder(nn.Module):
def __init__(self, config: BeitConfig, window_size: Optional[tuple] = None) -> None:
super().__init__()
self.config = config
if config.use_shared_relative_position_bias:
self.relative_position_bias = BeitRelativePositionBias(config, window_size=window_size)
else:
self.relative_position_bias = None
# stochastic depth decay rule
dpr = [x.item() for x in torch.linspace(0, config.drop_path_rate, config.num_hidden_layers)]
self.layer = nn.ModuleList(
[
BeitLayer(
config,
window_size=window_size if config.use_relative_position_bias else None,
drop_path_rate=dpr[i],
)
for i in range(config.num_hidden_layers)
]
)
self.gradient_checkpointing = False
def forward(
self,
hidden_states: torch.Tensor,
head_mask: Optional[torch.Tensor] = None,
output_attentions: bool = False,
output_hidden_states: bool = False,
return_dict: bool = True,
) -> Union[tuple, BaseModelOutput]:
all_hidden_states = () if output_hidden_states else None
all_self_attentions = () if output_attentions else None
for i, layer_module in enumerate(self.layer):
if output_hidden_states:
all_hidden_states = all_hidden_states + (hidden_states,)
layer_head_mask = head_mask[i] if head_mask is not None else None
if self.gradient_checkpointing and self.training:
def create_custom_forward(module):
def custom_forward(*inputs):
return module(*inputs, output_attentions)
return custom_forward
layer_outputs = torch.utils.checkpoint.checkpoint(
create_custom_forward(layer_module),
hidden_states,
layer_head_mask,
)
else:
relative_position_bias = (
self.relative_position_bias() if self.relative_position_bias is not None else None
)
layer_outputs = layer_module(hidden_states, layer_head_mask, output_attentions, relative_position_bias)
hidden_states = layer_outputs[0]
if output_attentions:
all_self_attentions = all_self_attentions + (layer_outputs[1],)
if output_hidden_states:
all_hidden_states = all_hidden_states + (hidden_states,)
if not return_dict:
return tuple(v for v in [hidden_states, all_hidden_states, all_self_attentions] if v is not None)
return BaseModelOutput(
last_hidden_state=hidden_states,
hidden_states=all_hidden_states,
attentions=all_self_attentions,
)
class BeitPreTrainedModel(PreTrainedModel):
"""
An abstract class to handle weights initialization and a simple interface for downloading and loading pretrained
models.
"""
config_class = BeitConfig
base_model_prefix = "beit"
main_input_name = "pixel_values"
supports_gradient_checkpointing = True
def _init_weights(self, module):
"""Initialize the weights"""
if isinstance(module, (nn.Linear, nn.Conv2d, nn.ConvTranspose2d)):
# Slightly different from the TF version which uses truncated_normal for initialization
# cf https://github.com/pytorch/pytorch/pull/5617
module.weight.data.normal_(mean=0.0, std=self.config.initializer_range)
if module.bias is not None:
module.bias.data.zero_()
elif isinstance(module, nn.Embedding):
module.weight.data.normal_(mean=0.0, std=self.config.initializer_range)
if module.padding_idx is not None:
module.weight.data[module.padding_idx].zero_()
elif isinstance(module, nn.LayerNorm):
module.bias.data.zero_()
module.weight.data.fill_(1.0)
def _set_gradient_checkpointing(self, module, value=False):
if isinstance(module, BeitEncoder):
module.gradient_checkpointing = value
BEIT_START_DOCSTRING = r"""
This model is a PyTorch [torch.nn.Module](https://pytorch.org/docs/stable/nn.html#torch.nn.Module) subclass. Use it
as a regular PyTorch Module and refer to the PyTorch documentation for all matter related to general usage and
behavior.
Parameters:
config ([`BeitConfig`]): Model configuration class with all the parameters of the model.
Initializing with a config file does not load the weights associated with the model, only the
configuration. Check out the [`~PreTrainedModel.from_pretrained`] method to load the model weights.
"""
BEIT_INPUTS_DOCSTRING = r"""
Args:
pixel_values (`torch.FloatTensor` of shape `(batch_size, num_channels, height, width)`):
Pixel values. Pixel values can be obtained using [`AutoImageProcessor`]. See
[`BeitImageProcessor.__call__`] for details.
head_mask (`torch.FloatTensor` of shape `(num_heads,)` or `(num_layers, num_heads)`, *optional*):
Mask to nullify selected heads of the self-attention modules. Mask values selected in `[0, 1]`:
- 1 indicates the head is **not masked**,
- 0 indicates the head is **masked**.
output_attentions (`bool`, *optional*):
Whether or not to return the attentions tensors of all attention layers. See `attentions` under returned
tensors for more detail.
output_hidden_states (`bool`, *optional*):
Whether or not to return the hidden states of all layers. See `hidden_states` under returned tensors for
more detail.
return_dict (`bool`, *optional*):
Whether or not to return a [`~utils.ModelOutput`] instead of a plain tuple.
"""
@add_start_docstrings(
"The bare Beit Model transformer outputting raw hidden-states without any specific head on top.",
BEIT_START_DOCSTRING,
)
class BeitModel(BeitPreTrainedModel):
def __init__(self, config: BeitConfig, add_pooling_layer: bool = True) -> None:
super().__init__(config)
self.config = config
self.embeddings = BeitEmbeddings(config)
self.encoder = BeitEncoder(config, window_size=self.embeddings.patch_embeddings.patch_shape)
self.layernorm = (
nn.Identity() if config.use_mean_pooling else nn.LayerNorm(config.hidden_size, eps=config.layer_norm_eps)
)
self.pooler = BeitPooler(config) if add_pooling_layer else None
# Initialize weights and apply final processing
self.post_init()
def get_input_embeddings(self):
return self.embeddings.patch_embeddings
def _prune_heads(self, heads_to_prune):
"""
Prunes heads of the model. heads_to_prune: dict of {layer_num: list of heads to prune in this layer} See base
class PreTrainedModel
"""
for layer, heads in heads_to_prune.items():
self.encoder.layer[layer].attention.prune_heads(heads)
@add_start_docstrings_to_model_forward(BEIT_INPUTS_DOCSTRING)
@add_code_sample_docstrings(
checkpoint=_CHECKPOINT_FOR_DOC,
output_type=BeitModelOutputWithPooling,
config_class=_CONFIG_FOR_DOC,
modality="vision",
expected_output=_EXPECTED_OUTPUT_SHAPE,
)
def forward(
self,
pixel_values: Optional[torch.Tensor] = None,
bool_masked_pos: Optional[torch.BoolTensor] = None,
head_mask: Optional[torch.Tensor] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[tuple, BeitModelOutputWithPooling]:
r"""
bool_masked_pos (`torch.BoolTensor` of shape `(batch_size, num_patches)`, *optional*):
Boolean masked positions. Indicates which patches are masked (1) and which aren't (0).
"""
output_attentions = output_attentions if output_attentions is not None else self.config.output_attentions
output_hidden_states = (
output_hidden_states if output_hidden_states is not None else self.config.output_hidden_states
)
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
if pixel_values is None:
raise ValueError("You have to specify pixel_values")
# Prepare head mask if needed
# 1.0 in head_mask indicate we keep the head
# attention_probs has shape bsz x n_heads x N x N
# input head_mask has shape [num_heads] or [num_hidden_layers x num_heads]
# and head_mask is converted to shape [num_hidden_layers x batch x num_heads x seq_length x seq_length]
head_mask = self.get_head_mask(head_mask, self.config.num_hidden_layers)
embedding_output = self.embeddings(pixel_values, bool_masked_pos)
encoder_outputs = self.encoder(
embedding_output,
head_mask=head_mask,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
sequence_output = encoder_outputs[0]
sequence_output = self.layernorm(sequence_output)
pooled_output = self.pooler(sequence_output) if self.pooler is not None else None
if not return_dict:
head_outputs = (sequence_output, pooled_output) if pooled_output is not None else (sequence_output,)
return head_outputs + encoder_outputs[1:]
return BeitModelOutputWithPooling(
last_hidden_state=sequence_output,
pooler_output=pooled_output,
hidden_states=encoder_outputs.hidden_states,
attentions=encoder_outputs.attentions,
)
class BeitPooler(nn.Module):
def __init__(self, config: BeitConfig) -> None:
super().__init__()
self.layernorm = (
nn.LayerNorm(config.hidden_size, eps=config.layer_norm_eps) if config.use_mean_pooling else None
)
def forward(self, hidden_states: torch.Tensor) -> torch.Tensor:
if self.layernorm is not None:
# Mean pool the final hidden states of the patch tokens
patch_tokens = hidden_states[:, 1:, :]
pooled_output = self.layernorm(patch_tokens.mean(1))
else:
# Pool by simply taking the final hidden state of the [CLS] token
pooled_output = hidden_states[:, 0]
return pooled_output
@add_start_docstrings(
"""Beit Model transformer with a 'language' modeling head on top. BEiT does masked image modeling by predicting
visual tokens of a Vector-Quantize Variational Autoencoder (VQ-VAE), whereas other vision models like ViT and DeiT
predict RGB pixel values. As a result, this class is incompatible with [`AutoModelForMaskedImageModeling`], so you
will need to use [`BeitForMaskedImageModeling`] directly if you wish to do masked image modeling with BEiT.""",
BEIT_START_DOCSTRING,
)
class BeitForMaskedImageModeling(BeitPreTrainedModel):
def __init__(self, config: BeitConfig) -> None:
super().__init__(config)
self.num_labels = config.num_labels
self.beit = BeitModel(config, add_pooling_layer=False)
# Classifier head
self.layernorm = nn.LayerNorm(config.hidden_size, eps=config.layer_norm_eps)
self.lm_head = nn.Linear(config.hidden_size, config.vocab_size)
# Initialize weights and apply final processing
self.post_init()
@add_start_docstrings_to_model_forward(BEIT_INPUTS_DOCSTRING)
@replace_return_docstrings(output_type=MaskedLMOutput, config_class=_CONFIG_FOR_DOC)
def forward(
self,
pixel_values: Optional[torch.Tensor] = None,
bool_masked_pos: Optional[torch.BoolTensor] = None,
head_mask: Optional[torch.Tensor] = None,
labels: Optional[torch.Tensor] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[tuple, MaskedLMOutput]:
r"""
bool_masked_pos (`torch.BoolTensor` of shape `(batch_size, num_patches)`):
Boolean masked positions. Indicates which patches are masked (1) and which aren't (0).
labels (`torch.LongTensor` of shape `(batch_size,)`, *optional*):
Labels for computing the image classification/regression loss. Indices should be in `[0, ...,
config.num_labels - 1]`. If `config.num_labels == 1` a regression loss is computed (Mean-Square loss), If
`config.num_labels > 1` a classification loss is computed (Cross-Entropy).
Returns:
Examples:
```python
>>> from transformers import AutoImageProcessor, BeitForMaskedImageModeling
>>> import torch
>>> from PIL import Image
>>> import requests
>>> url = "http://images.cocodataset.org/val2017/000000039769.jpg"
>>> image = Image.open(requests.get(url, stream=True).raw)
>>> image_processor = AutoImageProcessor.from_pretrained("microsoft/beit-base-patch16-224-pt22k")
>>> model = BeitForMaskedImageModeling.from_pretrained("microsoft/beit-base-patch16-224-pt22k")
>>> num_patches = (model.config.image_size // model.config.patch_size) ** 2
>>> pixel_values = image_processor(images=image, return_tensors="pt").pixel_values
>>> # create random boolean mask of shape (batch_size, num_patches)
>>> bool_masked_pos = torch.randint(low=0, high=2, size=(1, num_patches)).bool()
>>> outputs = model(pixel_values, bool_masked_pos=bool_masked_pos)
>>> loss, logits = outputs.loss, outputs.logits
>>> list(logits.shape)
[1, 196, 8192]
```"""
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
outputs = self.beit(
pixel_values,
bool_masked_pos=bool_masked_pos,
head_mask=head_mask,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
sequence_output = outputs[0]
sequence_output = self.layernorm(sequence_output)
prediction_scores = self.lm_head(sequence_output[:, 1:])
masked_lm_loss = None
if labels is not None:
loss_fct = CrossEntropyLoss() # -100 index = padding token
masked_lm_loss = loss_fct(prediction_scores[bool_masked_pos], labels)
if not return_dict:
output = (prediction_scores,) + outputs[1:]
return ((masked_lm_loss,) + output) if masked_lm_loss is not None else output
return MaskedLMOutput(
loss=masked_lm_loss,
logits=prediction_scores,
hidden_states=outputs.hidden_states,
attentions=outputs.attentions,
)
@add_start_docstrings(
"""
Beit Model transformer with an image classification head on top (a linear layer on top of the average of the final
hidden states of the patch tokens) e.g. for ImageNet.
""",
BEIT_START_DOCSTRING,
)
class BeitForImageClassification(BeitPreTrainedModel):
def __init__(self, config: BeitConfig) -> None:
super().__init__(config)
self.num_labels = config.num_labels
self.beit = BeitModel(config, add_pooling_layer=True)
# Classifier head
self.classifier = nn.Linear(config.hidden_size, config.num_labels) if config.num_labels > 0 else nn.Identity()
# Initialize weights and apply final processing
self.post_init()
@add_start_docstrings_to_model_forward(BEIT_INPUTS_DOCSTRING)
@add_code_sample_docstrings(
checkpoint=_IMAGE_CLASS_CHECKPOINT,
output_type=ImageClassifierOutput,
config_class=_CONFIG_FOR_DOC,
expected_output=_IMAGE_CLASS_EXPECTED_OUTPUT,
)
def forward(
self,
pixel_values: Optional[torch.Tensor] = None,
head_mask: Optional[torch.Tensor] = None,
labels: Optional[torch.Tensor] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[tuple, ImageClassifierOutput]:
r"""
labels (`torch.LongTensor` of shape `(batch_size,)`, *optional*):
Labels for computing the image classification/regression loss. Indices should be in `[0, ...,
config.num_labels - 1]`. If `config.num_labels == 1` a regression loss is computed (Mean-Square loss), If
`config.num_labels > 1` a classification loss is computed (Cross-Entropy).
"""
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
outputs = self.beit(
pixel_values,
head_mask=head_mask,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
pooled_output = outputs.pooler_output if return_dict else outputs[1]
logits = self.classifier(pooled_output)
loss = None
if labels is not None:
if self.config.problem_type is None:
if self.num_labels == 1:
self.config.problem_type = "regression"
elif self.num_labels > 1 and (labels.dtype == torch.long or labels.dtype == torch.int):
self.config.problem_type = "single_label_classification"
else:
self.config.problem_type = "multi_label_classification"
if self.config.problem_type == "regression":
loss_fct = MSELoss()
if self.num_labels == 1:
loss = loss_fct(logits.squeeze(), labels.squeeze())
else:
loss = loss_fct(logits, labels)
elif self.config.problem_type == "single_label_classification":
loss_fct = CrossEntropyLoss()
loss = loss_fct(logits.view(-1, self.num_labels), labels.view(-1))
elif self.config.problem_type == "multi_label_classification":
loss_fct = BCEWithLogitsLoss()
loss = loss_fct(logits, labels)
if not return_dict:
output = (logits,) + outputs[2:]
return ((loss,) + output) if loss is not None else output
return ImageClassifierOutput(
loss=loss,
logits=logits,
hidden_states=outputs.hidden_states,
attentions=outputs.attentions,
)
class BeitConvModule(nn.Module):
"""
A convolutional block that bundles conv/norm/activation layers. This block simplifies the usage of convolution
layers, which are commonly used with a norm layer (e.g., BatchNorm) and activation layer (e.g., ReLU).
Based on OpenMMLab's implementation, found in https://github.com/open-mmlab/mmsegmentation.
"""
def __init__(
self,
in_channels: int,
out_channels: int,
kernel_size: Union[int, Tuple[int, int]],
padding: Union[int, Tuple[int, int], str] = 0,
bias: bool = False,
dilation: Union[int, Tuple[int, int]] = 1,
) -> None:
super().__init__()
self.conv = nn.Conv2d(
in_channels=in_channels,
out_channels=out_channels,
kernel_size=kernel_size,
padding=padding,
bias=bias,
dilation=dilation,
)
self.bn = nn.BatchNorm2d(out_channels)
self.activation = nn.ReLU()
def forward(self, input: torch.Tensor) -> torch.Tensor:
output = self.conv(input)
output = self.bn(output)
output = self.activation(output)
return output
class BeitPyramidPoolingBlock(nn.Module):
def __init__(self, pool_scale: int, in_channels: int, channels: int) -> None:
super().__init__()
self.layers = [
nn.AdaptiveAvgPool2d(pool_scale),
BeitConvModule(in_channels, channels, kernel_size=1),
]
for i, layer in enumerate(self.layers):
self.add_module(str(i), layer)
def forward(self, input: torch.Tensor) -> torch.Tensor:
hidden_state = input
for layer in self.layers:
hidden_state = layer(hidden_state)
return hidden_state
class BeitPyramidPoolingModule(nn.Module):
"""
Pyramid Pooling Module (PPM) used in PSPNet.
Args:
pool_scales (tuple[int]): Pooling scales used in Pooling Pyramid
Module.
in_channels (int): Input channels.
channels (int): Channels after modules, before conv_seg.
align_corners (bool): align_corners argument of F.interpolate.
Based on OpenMMLab's implementation, found in https://github.com/open-mmlab/mmsegmentation.
"""
def __init__(self, pool_scales: Tuple[int, ...], in_channels: int, channels: int, align_corners: bool) -> None:
super().__init__()
self.pool_scales = pool_scales
self.align_corners = align_corners
self.in_channels = in_channels
self.channels = channels
self.blocks = []
for i, pool_scale in enumerate(pool_scales):
block = BeitPyramidPoolingBlock(pool_scale=pool_scale, in_channels=in_channels, channels=channels)
self.blocks.append(block)
self.add_module(str(i), block)
def forward(self, x: torch.Tensor) -> List[torch.Tensor]:
ppm_outs = []
for ppm in self.blocks:
ppm_out = ppm(x)
upsampled_ppm_out = nn.functional.interpolate(
ppm_out, size=x.size()[2:], mode="bilinear", align_corners=self.align_corners
)
ppm_outs.append(upsampled_ppm_out)
return ppm_outs
class BeitUperHead(nn.Module):
"""
Unified Perceptual Parsing for Scene Understanding. This head is the implementation of
[UPerNet](https://arxiv.org/abs/1807.10221).
Based on OpenMMLab's implementation, found in https://github.com/open-mmlab/mmsegmentation.
"""
def __init__(self, config: BeitConfig) -> None:
super().__init__()
self.pool_scales = config.pool_scales # e.g. (1, 2, 3, 6)
self.in_channels = [config.hidden_size] * 4 # e.g. [768, 768, 768, 768]
self.channels = config.hidden_size
self.align_corners = False
self.classifier = nn.Conv2d(self.channels, config.num_labels, kernel_size=1)
# PSP Module
self.psp_modules = BeitPyramidPoolingModule(
self.pool_scales,
self.in_channels[-1],
self.channels,
align_corners=self.align_corners,
)
self.bottleneck = BeitConvModule(
self.in_channels[-1] + len(self.pool_scales) * self.channels,
self.channels,
kernel_size=3,
padding=1,
)
# FPN Module
self.lateral_convs = nn.ModuleList()
self.fpn_convs = nn.ModuleList()
for in_channels in self.in_channels[:-1]: # skip the top layer
l_conv = BeitConvModule(in_channels, self.channels, kernel_size=1)
fpn_conv = BeitConvModule(self.channels, self.channels, kernel_size=3, padding=1)
self.lateral_convs.append(l_conv)
self.fpn_convs.append(fpn_conv)
self.fpn_bottleneck = BeitConvModule(
len(self.in_channels) * self.channels,
self.channels,
kernel_size=3,
padding=1,
)
def psp_forward(self, inputs):
x = inputs[-1]
psp_outs = [x]
psp_outs.extend(self.psp_modules(x))
psp_outs = torch.cat(psp_outs, dim=1)
output = self.bottleneck(psp_outs)
return output
def forward(self, encoder_hidden_states: torch.Tensor) -> torch.Tensor:
# build laterals
laterals = [lateral_conv(encoder_hidden_states[i]) for i, lateral_conv in enumerate(self.lateral_convs)]
laterals.append(self.psp_forward(encoder_hidden_states))
# build top-down path
used_backbone_levels = len(laterals)
for i in range(used_backbone_levels - 1, 0, -1):
prev_shape = laterals[i - 1].shape[2:]
laterals[i - 1] = laterals[i - 1] + nn.functional.interpolate(
laterals[i], size=prev_shape, mode="bilinear", align_corners=self.align_corners
)
# build outputs
fpn_outs = [self.fpn_convs[i](laterals[i]) for i in range(used_backbone_levels - 1)]
# append psp feature
fpn_outs.append(laterals[-1])
for i in range(used_backbone_levels - 1, 0, -1):
fpn_outs[i] = nn.functional.interpolate(
fpn_outs[i], size=fpn_outs[0].shape[2:], mode="bilinear", align_corners=self.align_corners
)
fpn_outs = torch.cat(fpn_outs, dim=1)
output = self.fpn_bottleneck(fpn_outs)
output = self.classifier(output)
return output
class BeitFCNHead(nn.Module):
"""
Fully Convolution Networks for Semantic Segmentation. This head is implemented of
[FCNNet](https://arxiv.org/abs/1411.4038>).
Args:
config (BeitConfig): Configuration.
in_channels
kernel_size (int): The kernel size for convs in the head. Default: 3.
dilation (int): The dilation rate for convs in the head. Default: 1.
Based on OpenMMLab's implementation, found in https://github.com/open-mmlab/mmsegmentation.
"""
def __init__(
self, config: BeitConfig, in_index: int = 2, kernel_size: int = 3, dilation: Union[int, Tuple[int, int]] = 1
) -> None:
super().__init__()
self.in_channels = config.hidden_size
self.channels = config.auxiliary_channels
self.num_convs = config.auxiliary_num_convs
self.concat_input = config.auxiliary_concat_input
self.in_index = in_index
conv_padding = (kernel_size // 2) * dilation
convs = []
convs.append(
BeitConvModule(
self.in_channels, self.channels, kernel_size=kernel_size, padding=conv_padding, dilation=dilation
)
)
for i in range(self.num_convs - 1):
convs.append(
BeitConvModule(
self.channels, self.channels, kernel_size=kernel_size, padding=conv_padding, dilation=dilation
)
)
if self.num_convs == 0:
self.convs = nn.Identity()
else:
self.convs = nn.Sequential(*convs)
if self.concat_input:
self.conv_cat = BeitConvModule(
self.in_channels + self.channels, self.channels, kernel_size=kernel_size, padding=kernel_size // 2
)
self.classifier = nn.Conv2d(self.channels, config.num_labels, kernel_size=1)
def forward(self, encoder_hidden_states: torch.Tensor) -> torch.Tensor:
# just take the relevant feature maps
hidden_states = encoder_hidden_states[self.in_index]
output = self.convs(hidden_states)
if self.concat_input:
output = self.conv_cat(torch.cat([hidden_states, output], dim=1))
output = self.classifier(output)
return output
@add_start_docstrings(
"""
Beit Model transformer with a semantic segmentation head on top e.g. for ADE20k, CityScapes.
""",
BEIT_START_DOCSTRING,
)
class BeitForSemanticSegmentation(BeitPreTrainedModel):
def __init__(self, config: BeitConfig) -> None:
super().__init__(config)
self.num_labels = config.num_labels
self.beit = BeitModel(config, add_pooling_layer=False)
# FPNs
self.fpn1 = nn.Sequential(
nn.ConvTranspose2d(config.hidden_size, config.hidden_size, kernel_size=2, stride=2),
nn.BatchNorm2d(config.hidden_size),
nn.GELU(),
nn.ConvTranspose2d(config.hidden_size, config.hidden_size, kernel_size=2, stride=2),
)
self.fpn2 = nn.Sequential(
nn.ConvTranspose2d(config.hidden_size, config.hidden_size, kernel_size=2, stride=2),
)
self.fpn3 = nn.Identity()
self.fpn4 = nn.MaxPool2d(kernel_size=2, stride=2)
# Semantic segmentation head(s)
self.decode_head = BeitUperHead(config)
self.auxiliary_head = BeitFCNHead(config) if config.use_auxiliary_head else None
# Initialize weights and apply final processing
self.post_init()
def compute_loss(self, logits, auxiliary_logits, labels):
# upsample logits to the images' original size
upsampled_logits = nn.functional.interpolate(
logits, size=labels.shape[-2:], mode="bilinear", align_corners=False
)
if auxiliary_logits is not None:
upsampled_auxiliary_logits = nn.functional.interpolate(
auxiliary_logits, size=labels.shape[-2:], mode="bilinear", align_corners=False
)
# compute weighted loss
loss_fct = CrossEntropyLoss(ignore_index=self.config.semantic_loss_ignore_index)
main_loss = loss_fct(upsampled_logits, labels)
loss = main_loss
if auxiliary_logits is not None:
auxiliary_loss = loss_fct(upsampled_auxiliary_logits, labels)
loss += self.config.auxiliary_loss_weight * auxiliary_loss
return loss
@add_start_docstrings_to_model_forward(BEIT_INPUTS_DOCSTRING)
@replace_return_docstrings(output_type=SemanticSegmenterOutput, config_class=_CONFIG_FOR_DOC)
def forward(
self,
pixel_values: Optional[torch.Tensor] = None,
head_mask: Optional[torch.Tensor] = None,
labels: Optional[torch.Tensor] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[tuple, SemanticSegmenterOutput]:
r"""
labels (`torch.LongTensor` of shape `(batch_size, height, width)`, *optional*):
Ground truth semantic segmentation maps for computing the loss. Indices should be in `[0, ...,
config.num_labels - 1]`. If `config.num_labels > 1`, a classification loss is computed (Cross-Entropy).
Returns:
Examples:
```python
>>> from transformers import AutoImageProcessor, BeitForSemanticSegmentation
>>> from PIL import Image
>>> import requests
>>> url = "http://images.cocodataset.org/val2017/000000039769.jpg"
>>> image = Image.open(requests.get(url, stream=True).raw)
>>> image_processor = AutoImageProcessor.from_pretrained("microsoft/beit-base-finetuned-ade-640-640")
>>> model = BeitForSemanticSegmentation.from_pretrained("microsoft/beit-base-finetuned-ade-640-640")
>>> inputs = image_processor(images=image, return_tensors="pt")
>>> outputs = model(**inputs)
>>> # logits are of shape (batch_size, num_labels, height, width)
>>> logits = outputs.logits
```"""
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
output_hidden_states = (
output_hidden_states if output_hidden_states is not None else self.config.output_hidden_states
)
outputs = self.beit(
pixel_values,
head_mask=head_mask,
output_attentions=output_attentions,
output_hidden_states=True, # we need the intermediate hidden states
return_dict=return_dict,
)
encoder_hidden_states = outputs.hidden_states if return_dict else outputs[1]
# only keep certain features, and reshape
# note that we do +1 as the encoder_hidden_states also includes the initial embeddings
features = [feature for idx, feature in enumerate(encoder_hidden_states) if idx + 1 in self.config.out_indices]
batch_size = pixel_values.shape[0]
patch_resolution = self.config.image_size // self.config.patch_size
features = [
x[:, 1:, :].permute(0, 2, 1).reshape(batch_size, -1, patch_resolution, patch_resolution) for x in features
]
# apply FPNs
ops = [self.fpn1, self.fpn2, self.fpn3, self.fpn4]
for i in range(len(features)):
features[i] = ops[i](features[i])
logits = self.decode_head(features)
auxiliary_logits = None
if self.auxiliary_head is not None:
auxiliary_logits = self.auxiliary_head(features)
loss = None
if labels is not None:
if self.config.num_labels == 1:
raise ValueError("The number of labels should be greater than one")
else:
loss = self.compute_loss(logits, auxiliary_logits, labels)
if not return_dict:
if output_hidden_states:
output = (logits,) + outputs[1:]
else:
output = (logits,) + outputs[2:]
return ((loss,) + output) if loss is not None else output
return SemanticSegmenterOutput(
loss=loss,
logits=logits,
hidden_states=outputs.hidden_states if output_hidden_states else None,
attentions=outputs.attentions,
)
| 54,268 | 40.971384 | 159 | py |
transformers | transformers-main/src/transformers/models/beit/configuration_beit.py | # coding=utf-8
# Copyright Microsoft Research and The HuggingFace Inc. team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
""" BEiT model configuration"""
from collections import OrderedDict
from typing import Mapping
from packaging import version
from ...configuration_utils import PretrainedConfig
from ...onnx import OnnxConfig
from ...utils import logging
logger = logging.get_logger(__name__)
BEIT_PRETRAINED_CONFIG_ARCHIVE_MAP = {
"microsoft/beit-base-patch16-224-pt22k": (
"https://huggingface.co/microsoft/beit-base-patch16-224-pt22k/resolve/main/config.json"
),
# See all BEiT models at https://huggingface.co/models?filter=beit
}
class BeitConfig(PretrainedConfig):
r"""
This is the configuration class to store the configuration of a [`BeitModel`]. It is used to instantiate an BEiT
model according to the specified arguments, defining the model architecture. Instantiating a configuration with the
defaults will yield a similar configuration to that of the BEiT
[microsoft/beit-base-patch16-224-pt22k](https://huggingface.co/microsoft/beit-base-patch16-224-pt22k) architecture.
Args:
vocab_size (`int`, *optional*, defaults to 8092):
Vocabulary size of the BEiT model. Defines the number of different image tokens that can be used during
pre-training.
hidden_size (`int`, *optional*, defaults to 768):
Dimensionality of the encoder layers and the pooler layer.
num_hidden_layers (`int`, *optional*, defaults to 12):
Number of hidden layers in the Transformer encoder.
num_attention_heads (`int`, *optional*, defaults to 12):
Number of attention heads for each attention layer in the Transformer encoder.
intermediate_size (`int`, *optional*, defaults to 3072):
Dimensionality of the "intermediate" (i.e., feed-forward) layer in the Transformer encoder.
hidden_act (`str` or `function`, *optional*, defaults to `"gelu"`):
The non-linear activation function (function or string) in the encoder and pooler. If string, `"gelu"`,
`"relu"`, `"selu"` and `"gelu_new"` are supported.
hidden_dropout_prob (`float`, *optional*, defaults to 0.0):
The dropout probability for all fully connected layers in the embeddings, encoder, and pooler.
attention_probs_dropout_prob (`float`, *optional*, defaults to 0.0):
The dropout ratio for the attention probabilities.
initializer_range (`float`, *optional*, defaults to 0.02):
The standard deviation of the truncated_normal_initializer for initializing all weight matrices.
layer_norm_eps (`float`, *optional*, defaults to 1e-12):
The epsilon used by the layer normalization layers.
image_size (`int`, *optional*, defaults to 224):
The size (resolution) of each image.
patch_size (`int`, *optional*, defaults to 16):
The size (resolution) of each patch.
num_channels (`int`, *optional*, defaults to 3):
The number of input channels.
use_mask_token (`bool`, *optional*, defaults to `False`):
Whether to use a mask token for masked image modeling.
use_absolute_position_embeddings (`bool`, *optional*, defaults to `False`):
Whether to use BERT-style absolute position embeddings.
use_relative_position_bias (`bool`, *optional*, defaults to `False`):
Whether to use T5-style relative position embeddings in the self-attention layers.
use_shared_relative_position_bias (`bool`, *optional*, defaults to `False`):
Whether to use the same relative position embeddings across all self-attention layers of the Transformer.
layer_scale_init_value (`float`, *optional*, defaults to 0.1):
Scale to use in the self-attention layers. 0.1 for base, 1e-5 for large. Set 0 to disable layer scale.
drop_path_rate (`float`, *optional*, defaults to 0.1):
Stochastic depth rate per sample (when applied in the main path of residual layers).
use_mean_pooling (`bool`, *optional*, defaults to `True`):
Whether to mean pool the final hidden states of the patches instead of using the final hidden state of the
CLS token, before applying the classification head.
out_indices (`List[int]`, *optional*, defaults to `[3, 5, 7, 11]`):
Indices of the feature maps to use for semantic segmentation.
pool_scales (`Tuple[int]`, *optional*, defaults to `[1, 2, 3, 6]`):
Pooling scales used in Pooling Pyramid Module applied on the last feature map.
use_auxiliary_head (`bool`, *optional*, defaults to `True`):
Whether to use an auxiliary head during training.
auxiliary_loss_weight (`float`, *optional*, defaults to 0.4):
Weight of the cross-entropy loss of the auxiliary head.
auxiliary_channels (`int`, *optional*, defaults to 256):
Number of channels to use in the auxiliary head.
auxiliary_num_convs (`int`, *optional*, defaults to 1):
Number of convolutional layers to use in the auxiliary head.
auxiliary_concat_input (`bool`, *optional*, defaults to `False`):
Whether to concatenate the output of the auxiliary head with the input before the classification layer.
semantic_loss_ignore_index (`int`, *optional*, defaults to 255):
The index that is ignored by the loss function of the semantic segmentation model.
Example:
```python
>>> from transformers import BeitConfig, BeitModel
>>> # Initializing a BEiT beit-base-patch16-224-pt22k style configuration
>>> configuration = BeitConfig()
>>> # Initializing a model (with random weights) from the beit-base-patch16-224-pt22k style configuration
>>> model = BeitModel(configuration)
>>> # Accessing the model configuration
>>> configuration = model.config
```"""
model_type = "beit"
def __init__(
self,
vocab_size=8192,
hidden_size=768,
num_hidden_layers=12,
num_attention_heads=12,
intermediate_size=3072,
hidden_act="gelu",
hidden_dropout_prob=0.0,
attention_probs_dropout_prob=0.0,
initializer_range=0.02,
layer_norm_eps=1e-12,
image_size=224,
patch_size=16,
num_channels=3,
use_mask_token=False,
use_absolute_position_embeddings=False,
use_relative_position_bias=False,
use_shared_relative_position_bias=False,
layer_scale_init_value=0.1,
drop_path_rate=0.1,
use_mean_pooling=True,
out_indices=[3, 5, 7, 11],
pool_scales=[1, 2, 3, 6],
use_auxiliary_head=True,
auxiliary_loss_weight=0.4,
auxiliary_channels=256,
auxiliary_num_convs=1,
auxiliary_concat_input=False,
semantic_loss_ignore_index=255,
**kwargs,
):
super().__init__(**kwargs)
self.vocab_size = vocab_size
self.hidden_size = hidden_size
self.num_hidden_layers = num_hidden_layers
self.num_attention_heads = num_attention_heads
self.intermediate_size = intermediate_size
self.hidden_act = hidden_act
self.hidden_dropout_prob = hidden_dropout_prob
self.attention_probs_dropout_prob = attention_probs_dropout_prob
self.initializer_range = initializer_range
self.layer_norm_eps = layer_norm_eps
self.image_size = image_size
self.patch_size = patch_size
self.num_channels = num_channels
self.use_mask_token = use_mask_token
self.use_absolute_position_embeddings = use_absolute_position_embeddings
self.use_relative_position_bias = use_relative_position_bias
self.use_shared_relative_position_bias = use_shared_relative_position_bias
self.layer_scale_init_value = layer_scale_init_value
self.drop_path_rate = drop_path_rate
self.use_mean_pooling = use_mean_pooling
# decode head attributes (semantic segmentation)
self.out_indices = out_indices
self.pool_scales = pool_scales
# auxiliary head attributes (semantic segmentation)
self.use_auxiliary_head = use_auxiliary_head
self.auxiliary_loss_weight = auxiliary_loss_weight
self.auxiliary_channels = auxiliary_channels
self.auxiliary_num_convs = auxiliary_num_convs
self.auxiliary_concat_input = auxiliary_concat_input
self.semantic_loss_ignore_index = semantic_loss_ignore_index
# Copied from transformers.models.vit.configuration_vit.ViTOnnxConfig
class BeitOnnxConfig(OnnxConfig):
torch_onnx_minimum_version = version.parse("1.11")
@property
def inputs(self) -> Mapping[str, Mapping[int, str]]:
return OrderedDict(
[
("pixel_values", {0: "batch", 1: "num_channels", 2: "height", 3: "width"}),
]
)
@property
def atol_for_validation(self) -> float:
return 1e-4
| 9,641 | 46.732673 | 119 | py |
transformers | transformers-main/src/transformers/models/beit/convert_beit_unilm_to_pytorch.py | # coding=utf-8
# Copyright 2021 The HuggingFace Inc. team.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
"""Convert BEiT checkpoints from the unilm repository."""
import argparse
import json
from pathlib import Path
import requests
import torch
from datasets import load_dataset
from huggingface_hub import hf_hub_download
from PIL import Image
from transformers import (
BeitConfig,
BeitForImageClassification,
BeitForMaskedImageModeling,
BeitForSemanticSegmentation,
BeitImageProcessor,
)
from transformers.image_utils import PILImageResampling
from transformers.utils import logging
logging.set_verbosity_info()
logger = logging.get_logger(__name__)
# here we list all keys to be renamed (original name on the left, our name on the right)
def create_rename_keys(config, has_lm_head=False, is_semantic=False):
prefix = "backbone." if is_semantic else ""
rename_keys = []
for i in range(config.num_hidden_layers):
# encoder layers: output projection, 2 feedforward neural networks and 2 layernorms
rename_keys.append((f"{prefix}blocks.{i}.norm1.weight", f"beit.encoder.layer.{i}.layernorm_before.weight"))
rename_keys.append((f"{prefix}blocks.{i}.norm1.bias", f"beit.encoder.layer.{i}.layernorm_before.bias"))
rename_keys.append(
(f"{prefix}blocks.{i}.attn.proj.weight", f"beit.encoder.layer.{i}.attention.output.dense.weight")
)
rename_keys.append(
(f"{prefix}blocks.{i}.attn.proj.bias", f"beit.encoder.layer.{i}.attention.output.dense.bias")
)
rename_keys.append((f"{prefix}blocks.{i}.norm2.weight", f"beit.encoder.layer.{i}.layernorm_after.weight"))
rename_keys.append((f"{prefix}blocks.{i}.norm2.bias", f"beit.encoder.layer.{i}.layernorm_after.bias"))
rename_keys.append((f"{prefix}blocks.{i}.mlp.fc1.weight", f"beit.encoder.layer.{i}.intermediate.dense.weight"))
rename_keys.append((f"{prefix}blocks.{i}.mlp.fc1.bias", f"beit.encoder.layer.{i}.intermediate.dense.bias"))
rename_keys.append((f"{prefix}blocks.{i}.mlp.fc2.weight", f"beit.encoder.layer.{i}.output.dense.weight"))
rename_keys.append((f"{prefix}blocks.{i}.mlp.fc2.bias", f"beit.encoder.layer.{i}.output.dense.bias"))
# projection layer + position embeddings
rename_keys.extend(
[
(f"{prefix}cls_token", "beit.embeddings.cls_token"),
(f"{prefix}patch_embed.proj.weight", "beit.embeddings.patch_embeddings.projection.weight"),
(f"{prefix}patch_embed.proj.bias", "beit.embeddings.patch_embeddings.projection.bias"),
]
)
if has_lm_head:
# mask token + shared relative position bias + layernorm
rename_keys.extend(
[
("mask_token", "beit.embeddings.mask_token"),
(
"rel_pos_bias.relative_position_bias_table",
"beit.encoder.relative_position_bias.relative_position_bias_table",
),
(
"rel_pos_bias.relative_position_index",
"beit.encoder.relative_position_bias.relative_position_index",
),
("norm.weight", "layernorm.weight"),
("norm.bias", "layernorm.bias"),
]
)
elif is_semantic:
# semantic segmentation classification heads
rename_keys.extend(
[
("decode_head.conv_seg.weight", "decode_head.classifier.weight"),
("decode_head.conv_seg.bias", "decode_head.classifier.bias"),
("auxiliary_head.conv_seg.weight", "auxiliary_head.classifier.weight"),
("auxiliary_head.conv_seg.bias", "auxiliary_head.classifier.bias"),
]
)
else:
# layernorm + classification head
rename_keys.extend(
[
("fc_norm.weight", "beit.pooler.layernorm.weight"),
("fc_norm.bias", "beit.pooler.layernorm.bias"),
("head.weight", "classifier.weight"),
("head.bias", "classifier.bias"),
]
)
return rename_keys
# we split up the matrix of each encoder layer into queries, keys and values
def read_in_q_k_v(state_dict, config, has_lm_head=False, is_semantic=False):
for i in range(config.num_hidden_layers):
prefix = "backbone." if is_semantic else ""
# queries, keys and values
in_proj_weight = state_dict.pop(f"{prefix}blocks.{i}.attn.qkv.weight")
q_bias = state_dict.pop(f"{prefix}blocks.{i}.attn.q_bias")
v_bias = state_dict.pop(f"{prefix}blocks.{i}.attn.v_bias")
state_dict[f"beit.encoder.layer.{i}.attention.attention.query.weight"] = in_proj_weight[
: config.hidden_size, :
]
state_dict[f"beit.encoder.layer.{i}.attention.attention.query.bias"] = q_bias
state_dict[f"beit.encoder.layer.{i}.attention.attention.key.weight"] = in_proj_weight[
config.hidden_size : config.hidden_size * 2, :
]
state_dict[f"beit.encoder.layer.{i}.attention.attention.value.weight"] = in_proj_weight[
-config.hidden_size :, :
]
state_dict[f"beit.encoder.layer.{i}.attention.attention.value.bias"] = v_bias
# gamma_1 and gamma_2
# we call them lambda because otherwise they are renamed when using .from_pretrained
gamma_1 = state_dict.pop(f"{prefix}blocks.{i}.gamma_1")
gamma_2 = state_dict.pop(f"{prefix}blocks.{i}.gamma_2")
state_dict[f"beit.encoder.layer.{i}.lambda_1"] = gamma_1
state_dict[f"beit.encoder.layer.{i}.lambda_2"] = gamma_2
# relative_position bias table + index
if not has_lm_head:
# each layer has its own relative position bias
table = state_dict.pop(f"{prefix}blocks.{i}.attn.relative_position_bias_table")
index = state_dict.pop(f"{prefix}blocks.{i}.attn.relative_position_index")
state_dict[
f"beit.encoder.layer.{i}.attention.attention.relative_position_bias.relative_position_bias_table"
] = table
state_dict[
f"beit.encoder.layer.{i}.attention.attention.relative_position_bias.relative_position_index"
] = index
def rename_key(dct, old, new):
val = dct.pop(old)
dct[new] = val
# We will verify our results on an image of cute cats
def prepare_img():
url = "http://images.cocodataset.org/val2017/000000039769.jpg"
im = Image.open(requests.get(url, stream=True).raw)
return im
@torch.no_grad()
def convert_beit_checkpoint(checkpoint_url, pytorch_dump_folder_path):
"""
Copy/paste/tweak model's weights to our BEiT structure.
"""
# define default BEiT configuration
config = BeitConfig()
has_lm_head = False
is_semantic = False
repo_id = "huggingface/label-files"
# set config parameters based on URL
if checkpoint_url[-9:-4] == "pt22k":
# masked image modeling
config.use_shared_relative_position_bias = True
config.use_mask_token = True
has_lm_head = True
elif checkpoint_url[-9:-4] == "ft22k":
# intermediate fine-tuning on ImageNet-22k
config.use_relative_position_bias = True
config.num_labels = 21841
filename = "imagenet-22k-id2label.json"
id2label = json.load(open(hf_hub_download(repo_id, filename, repo_type="dataset"), "r"))
id2label = {int(k): v for k, v in id2label.items()}
# this dataset contains 21843 labels but the model only has 21841
# we delete the classes as mentioned in https://github.com/google-research/big_transfer/issues/18
del id2label[9205]
del id2label[15027]
config.id2label = id2label
config.label2id = {v: k for k, v in id2label.items()}
elif checkpoint_url[-8:-4] == "to1k":
# fine-tuning on ImageNet-1k
config.use_relative_position_bias = True
config.num_labels = 1000
filename = "imagenet-1k-id2label.json"
id2label = json.load(open(hf_hub_download(repo_id, filename, repo_type="dataset"), "r"))
id2label = {int(k): v for k, v in id2label.items()}
config.id2label = id2label
config.label2id = {v: k for k, v in id2label.items()}
if "384" in checkpoint_url:
config.image_size = 384
if "512" in checkpoint_url:
config.image_size = 512
elif "ade20k" in checkpoint_url:
# fine-tuning
config.use_relative_position_bias = True
config.num_labels = 150
filename = "ade20k-id2label.json"
id2label = json.load(open(hf_hub_download(repo_id, filename, repo_type="dataset"), "r"))
id2label = {int(k): v for k, v in id2label.items()}
config.id2label = id2label
config.label2id = {v: k for k, v in id2label.items()}
config.image_size = 640
is_semantic = True
else:
raise ValueError("Checkpoint not supported, URL should either end with 'pt22k', 'ft22k', 'to1k' or 'ade20k'")
# size of the architecture
if "base" in checkpoint_url:
pass
elif "large" in checkpoint_url:
config.hidden_size = 1024
config.intermediate_size = 4096
config.num_hidden_layers = 24
config.num_attention_heads = 16
if "ade20k" in checkpoint_url:
config.image_size = 640
config.out_indices = [7, 11, 15, 23]
else:
raise ValueError("Should either find 'base' or 'large' in checkpoint URL")
# load state_dict of original model, remove and rename some keys
state_dict = torch.hub.load_state_dict_from_url(checkpoint_url, map_location="cpu", check_hash=True)
state_dict = state_dict["model"] if "ade20k" not in checkpoint_url else state_dict["state_dict"]
rename_keys = create_rename_keys(config, has_lm_head=has_lm_head, is_semantic=is_semantic)
for src, dest in rename_keys:
rename_key(state_dict, src, dest)
read_in_q_k_v(state_dict, config, has_lm_head=has_lm_head, is_semantic=is_semantic)
if is_semantic:
# add prefix to decoder keys
for key, val in state_dict.copy().items():
val = state_dict.pop(key)
if key.startswith("backbone.fpn"):
key = key.replace("backbone.fpn", "fpn")
state_dict[key] = val
# load HuggingFace model
if checkpoint_url[-9:-4] == "pt22k":
model = BeitForMaskedImageModeling(config)
elif "ade20k" in checkpoint_url:
model = BeitForSemanticSegmentation(config)
else:
model = BeitForImageClassification(config)
model.eval()
model.load_state_dict(state_dict)
# Check outputs on an image
if is_semantic:
image_processor = BeitImageProcessor(size=config.image_size, do_center_crop=False)
ds = load_dataset("hf-internal-testing/fixtures_ade20k", split="test")
image = Image.open(ds[0]["file"])
else:
image_processor = BeitImageProcessor(
size=config.image_size, resample=PILImageResampling.BILINEAR, do_center_crop=False
)
image = prepare_img()
encoding = image_processor(images=image, return_tensors="pt")
pixel_values = encoding["pixel_values"]
outputs = model(pixel_values)
logits = outputs.logits
# verify logits
expected_shape = torch.Size([1, 1000])
if checkpoint_url[:-4].endswith("beit_base_patch16_224_pt22k"):
expected_shape = torch.Size([1, 196, 8192])
elif checkpoint_url[:-4].endswith("beit_large_patch16_224_pt22k"):
expected_shape = torch.Size([1, 196, 8192])
elif checkpoint_url[:-4].endswith("beit_base_patch16_224_pt22k_ft22k"):
expected_shape = torch.Size([1, 21841])
expected_logits = torch.tensor([2.2288, 2.4671, 0.7395])
expected_class_idx = 2397
elif checkpoint_url[:-4].endswith("beit_large_patch16_224_pt22k_ft22k"):
expected_shape = torch.Size([1, 21841])
expected_logits = torch.tensor([1.6881, -0.2787, 0.5901])
expected_class_idx = 2396
elif checkpoint_url[:-4].endswith("beit_base_patch16_224_pt22k_ft1k"):
expected_logits = torch.tensor([0.1241, 0.0798, -0.6569])
expected_class_idx = 285
elif checkpoint_url[:-4].endswith("beit_base_patch16_224_pt22k_ft22kto1k"):
expected_logits = torch.tensor([-1.2385, -1.0987, -1.0108])
expected_class_idx = 281
elif checkpoint_url[:-4].endswith("beit_base_patch16_384_pt22k_ft22kto1k"):
expected_logits = torch.tensor([-1.5303, -0.9484, -0.3147])
expected_class_idx = 761
elif checkpoint_url[:-4].endswith("beit_large_patch16_224_pt22k_ft1k"):
expected_logits = torch.tensor([0.4610, -0.0928, 0.2086])
expected_class_idx = 761
elif checkpoint_url[:-4].endswith("beit_large_patch16_224_pt22k_ft22kto1k"):
expected_logits = torch.tensor([-0.4804, 0.6257, -0.1837])
expected_class_idx = 761
elif checkpoint_url[:-4].endswith("beit_large_patch16_384_pt22k_ft22kto1k"):
expected_logits = torch.tensor([[-0.5122, 0.5117, -0.2113]])
expected_class_idx = 761
elif checkpoint_url[:-4].endswith("beit_large_patch16_512_pt22k_ft22kto1k"):
expected_logits = torch.tensor([-0.3062, 0.7261, 0.4852])
expected_class_idx = 761
elif checkpoint_url[:-4].endswith("beit_base_patch16_640_pt22k_ft22ktoade20k"):
expected_shape = (1, 150, 160, 160)
expected_logits = torch.tensor(
[
[[-4.9225, -2.3954, -3.0522], [-2.8822, -1.0046, -1.7561], [-2.9549, -1.3228, -2.1347]],
[[-5.8168, -3.4129, -4.0778], [-3.8651, -2.2214, -3.0277], [-3.8356, -2.4643, -3.3535]],
[[-0.0078, 3.9952, 4.0754], [2.9856, 4.6944, 5.0035], [3.2413, 4.7813, 4.9969]],
]
)
elif checkpoint_url[:-4].endswith("beit_large_patch16_640_pt22k_ft22ktoade20k"):
expected_shape = (1, 150, 160, 160)
expected_logits = torch.tensor(
[
[[-4.3305, -2.3049, -3.0161], [-2.9591, -1.5305, -2.2251], [-3.4198, -1.8004, -2.9062]],
[[-5.8922, -3.7435, -4.3978], [-4.2063, -2.7872, -3.4755], [-4.2791, -3.1874, -4.1681]],
[[0.9895, 4.3467, 4.7663], [4.2476, 5.6830, 6.1518], [4.5550, 6.2495, 6.5154]],
]
)
else:
raise ValueError("Can't verify logits as model is not supported")
if logits.shape != expected_shape:
raise ValueError(f"Shape of logits not as expected. {logits.shape=}, {expected_shape=}")
if not has_lm_head:
if is_semantic:
if not torch.allclose(logits[0, :3, :3, :3], expected_logits, atol=1e-3):
raise ValueError("First elements of logits not as expected")
else:
print("Predicted class idx:", logits.argmax(-1).item())
if not torch.allclose(logits[0, :3], expected_logits, atol=1e-3):
raise ValueError("First elements of logits not as expected")
if logits.argmax(-1).item() != expected_class_idx:
raise ValueError("Predicted class index not as expected")
Path(pytorch_dump_folder_path).mkdir(exist_ok=True)
print(f"Saving model to {pytorch_dump_folder_path}")
model.save_pretrained(pytorch_dump_folder_path)
print(f"Saving image processor to {pytorch_dump_folder_path}")
image_processor.save_pretrained(pytorch_dump_folder_path)
if __name__ == "__main__":
parser = argparse.ArgumentParser()
parser.add_argument(
"--checkpoint_url",
default="https://conversationhub.blob.core.windows.net/beit-share-public/beit/beit_base_patch16_224_pt22k_ft22kto1k.pth",
type=str,
help="URL to the original PyTorch checkpoint (.pth file).",
)
parser.add_argument(
"--pytorch_dump_folder_path", default=None, type=str, help="Path to the folder to output PyTorch model."
)
args = parser.parse_args()
convert_beit_checkpoint(args.checkpoint_url, args.pytorch_dump_folder_path)
| 16,578 | 43.210667 | 129 | py |
transformers | transformers-main/src/transformers/models/beit/modeling_flax_beit.py | # coding=utf-8
# Copyright 2021 Microsoft Research and the HuggingFace Inc. team.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
from typing import Callable, List, Optional, Tuple
import flax
import flax.linen as nn
import jax
import jax.numpy as jnp
import numpy as np
from flax.core.frozen_dict import FrozenDict, freeze, unfreeze
from flax.linen.attention import dot_product_attention_weights
from flax.traverse_util import flatten_dict, unflatten_dict
from ...modeling_flax_outputs import (
FlaxBaseModelOutput,
FlaxBaseModelOutputWithPooling,
FlaxMaskedLMOutput,
FlaxSequenceClassifierOutput,
)
from ...modeling_flax_utils import (
ACT2FN,
FlaxPreTrainedModel,
append_replace_return_docstrings,
overwrite_call_docstring,
)
from ...utils import add_start_docstrings, add_start_docstrings_to_model_forward
from .configuration_beit import BeitConfig
@flax.struct.dataclass
class FlaxBeitModelOutputWithPooling(FlaxBaseModelOutputWithPooling):
"""
Class for outputs of [`FlaxBeitModel`].
Args:
last_hidden_state (`jnp.ndarray` of shape `(batch_size, sequence_length, hidden_size)`):
Sequence of hidden-states at the output of the last layer of the model.
pooler_output (`jnp.ndarray` of shape `(batch_size, hidden_size)`):
Average of the last layer hidden states of the patch tokens (excluding the *[CLS]* token) if
*config.use_mean_pooling* is set to True. If set to False, then the final hidden state of the *[CLS]* token
will be returned.
hidden_states (`tuple(jnp.ndarray)`, *optional*, returned when `output_hidden_states=True` is passed or when `config.output_hidden_states=True`):
Tuple of `jnp.ndarray` (one for the output of the embeddings + one for the output of each layer) of shape
`(batch_size, sequence_length, hidden_size)`. Hidden-states of the model at the output of each layer plus
the initial embedding outputs.
attentions (`tuple(jnp.ndarray)`, *optional*, returned when `output_attentions=True` is passed or when `config.output_attentions=True`):
Tuple of `jnp.ndarray` (one for each layer) of shape `(batch_size, num_heads, sequence_length,
sequence_length)`. Attentions weights after the attention softmax, used to compute the weighted average in
the self-attention heads.
"""
BEIT_START_DOCSTRING = r"""
This model inherits from [`FlaxPreTrainedModel`]. Check the superclass documentation for the generic methods the
library implements for all its model (such as downloading, saving and converting weights from PyTorch models)
This model is also a Flax Linen [flax.linen.Module](https://flax.readthedocs.io/en/latest/flax.linen.html#module)
subclass. Use it as a regular Flax linen Module and refer to the Flax documentation for all matter related to
general usage and behavior.
Finally, this model supports inherent JAX features such as:
- [Just-In-Time (JIT) compilation](https://jax.readthedocs.io/en/latest/jax.html#just-in-time-compilation-jit)
- [Automatic Differentiation](https://jax.readthedocs.io/en/latest/jax.html#automatic-differentiation)
- [Vectorization](https://jax.readthedocs.io/en/latest/jax.html#vectorization-vmap)
- [Parallelization](https://jax.readthedocs.io/en/latest/jax.html#parallelization-pmap)
Parameters:
config ([`BeitConfig`]): Model configuration class with all the parameters of the model.
Initializing with a config file does not load the weights associated with the model, only the
configuration. Check out the [`~FlaxPreTrainedModel.from_pretrained`] method to load the model weights.
dtype (`jax.numpy.dtype`, *optional*, defaults to `jax.numpy.float32`):
The data type of the computation. Can be one of `jax.numpy.float32`, `jax.numpy.float16` (on GPUs) and
`jax.numpy.bfloat16` (on TPUs).
This can be used to enable mixed-precision training or half-precision inference on GPUs or TPUs. If
specified all the computation will be performed with the given `dtype`.
**Note that this only specifies the dtype of the computation and does not influence the dtype of model
parameters.**
If you wish to change the dtype of the model parameters, see [`~FlaxPreTrainedModel.to_fp16`] and
[`~FlaxPreTrainedModel.to_bf16`].
"""
BEIT_INPUTS_DOCSTRING = r"""
Args:
pixel_values (`numpy.ndarray` of shape `(batch_size, num_channels, height, width)`):
Pixel values. Pixel values can be obtained using [`AutoImageProcessor`]. See
[`AutoImageProcessor.__call__`] for details.
output_attentions (`bool`, *optional*):
Whether or not to return the attentions tensors of all attention layers. See `attentions` under returned
tensors for more detail.
output_hidden_states (`bool`, *optional*):
Whether or not to return the hidden states of all layers. See `hidden_states` under returned tensors for
more detail.
return_dict (`bool`, *optional*):
Whether or not to return a [`~utils.ModelOutput`] instead of a plain tuple.
"""
def relative_position_index_init(window_size: Tuple[int, int]) -> jnp.ndarray:
"""
get pair-wise relative position index for each token inside the window
"""
num_relative_distance = (2 * window_size[0] - 1) * (2 * window_size[1] - 1) + 3
coords_h = np.arange(window_size[0])
coords_w = np.arange(window_size[1])
coords = np.stack(np.meshgrid(coords_h, coords_w, indexing="ij")) # 2, Wh, Ww
coords_flatten = np.reshape(coords, (2, -1))
relative_coords = coords_flatten[:, :, None] - coords_flatten[:, None, :] # 2, Wh*Ww, Wh*Ww
relative_coords = np.transpose(relative_coords, (1, 2, 0)) # Wh*Ww, Wh*Ww, 2
relative_coords[:, :, 0] += window_size[0] - 1 # shift to start from 0
relative_coords[:, :, 1] += window_size[1] - 1
relative_coords[:, :, 0] *= 2 * window_size[1] - 1
relative_position_index = np.zeros(shape=(window_size[0] * window_size[1] + 1,) * 2, dtype=relative_coords.dtype)
relative_position_index[1:, 1:] = relative_coords.sum(-1) # Wh*Ww, Wh*Ww
relative_position_index[0, 0:] = num_relative_distance - 3
relative_position_index[0:, 0] = num_relative_distance - 2
relative_position_index[0, 0] = num_relative_distance - 1
return jnp.array(relative_position_index)
def ones_with_scale(key, shape, scale, dtype=jnp.float32):
return jnp.ones(shape, dtype) * scale
class FlaxBeitDropPath(nn.Module):
"""Drop paths (Stochastic Depth) per sample (when applied in main path of residual blocks)."""
rate: float
@nn.module.compact
def __call__(self, inputs, deterministic: Optional[bool] = True):
if self.rate == 0.0:
return inputs
keep_prob = 1.0 - self.rate
if deterministic:
return inputs
else:
shape = (inputs.shape[0],) + (1,) * (inputs.ndim - 1) # work with diff dim tensors, not just 2D ConvNets
rng = self.make_rng("droppath")
random_tensor = keep_prob + jax.random.uniform(rng, shape=shape, dtype=inputs.dtype)
binary_tensor = jnp.floor(random_tensor)
output = inputs / keep_prob * binary_tensor
return output
class FlaxBeitPatchEmbeddings(nn.Module):
config: BeitConfig
dtype: jnp.dtype = jnp.float32 # the dtype of the computation
def setup(self):
self.num_channels = self.config.num_channels
image_size = self.config.image_size
patch_size = self.config.patch_size
num_patches = (image_size // patch_size) * (image_size // patch_size)
patch_shape = (image_size // patch_size, image_size // patch_size)
self.num_patches = num_patches
self.patch_shape = patch_shape
self.projection = nn.Conv(
self.config.hidden_size,
kernel_size=(patch_size, patch_size),
strides=(patch_size, patch_size),
padding="VALID",
dtype=self.dtype,
kernel_init=jax.nn.initializers.normal(self.config.initializer_range),
)
def __call__(self, pixel_values):
num_channels = pixel_values.shape[-1]
if num_channels != self.num_channels:
raise ValueError(
"Make sure that the channel dimension of the pixel values match with the one set in the configuration."
)
embeddings = self.projection(pixel_values)
batch_size, _, _, channels = embeddings.shape
return jnp.reshape(embeddings, (batch_size, -1, channels))
class FlaxBeitEmbeddings(nn.Module):
"""Construct the CLS token, position and patch embeddings."""
config: BeitConfig
dtype: jnp.dtype = jnp.float32 # the dtype of the computation
def setup(self):
self.cls_token = self.param("cls_token", nn.initializers.zeros, (1, 1, self.config.hidden_size))
if self.config.use_mask_token:
self.mask_token = self.param("mask_token", nn.initializers.zeros, (1, 1, self.config.hidden_size))
self.patch_embeddings = FlaxBeitPatchEmbeddings(self.config, dtype=self.dtype)
num_patches = self.patch_embeddings.num_patches
if self.config.use_absolute_position_embeddings:
self.position_embeddings = self.param(
"position_embeddings", nn.initializers.zeros, (1, num_patches + 1, self.config.hidden_size)
)
self.dropout = nn.Dropout(rate=self.config.hidden_dropout_prob)
def __call__(self, pixel_values, bool_masked_pos=None, deterministic=True):
embeddings = self.patch_embeddings(pixel_values)
batch_size, seq_len, _ = embeddings.shape
cls_tokens = jnp.broadcast_to(self.cls_token, (batch_size, 1, self.config.hidden_size))
cls_tokens = cls_tokens.astype(embeddings.dtype)
if bool_masked_pos is not None:
mask_tokens = jnp.broadcast_to(self.mask_token, (batch_size, seq_len, self.config.hidden_size))
mask_tokens = mask_tokens.astype(embeddings.dtype)
# replace the masked visual tokens by mask_tokens
w = jnp.expand_dims(bool_masked_pos, axis=-1)
embeddings = embeddings * (1 - w) + mask_tokens * w
embeddings = jnp.concatenate((cls_tokens, embeddings), axis=1)
if self.config.use_absolute_position_embeddings:
embeddings = embeddings + self.position_embeddings.astype(embeddings.dtype)
embeddings = self.dropout(embeddings, deterministic=deterministic)
return embeddings
class FlaxBeitRelativePositionBias(nn.Module):
config: BeitConfig
window_size: Tuple[int, int]
dtype: jnp.dtype = jnp.float32 # the dtype of the computation
def setup(self):
num_relative_distance = (2 * self.window_size[0] - 1) * (2 * self.window_size[1] - 1) + 3
self.relative_position_bias_table = self.param(
"relative_position_bias_table",
nn.initializers.zeros,
(num_relative_distance, self.config.num_attention_heads),
) # 2*Wh-1 * 2*Ww-1, nH
# cls to token & token 2 cls & cls to cls
self.relative_position_index = relative_position_index_init(self.window_size)
def __call__(self):
index = self.relative_position_index.reshape(-1)
shape = (self.window_size[0] * self.window_size[1] + 1, self.window_size[0] * self.window_size[1] + 1, -1)
relative_position_bias = self.relative_position_bias_table[index].reshape(shape) # Wh*Ww,Wh*Ww,nH
return jnp.transpose(relative_position_bias, (2, 0, 1))
class FlaxBeitSelfAttention(nn.Module):
config: BeitConfig
window_size: Tuple[int, int]
dtype: jnp.dtype = jnp.float32 # the dtype of the computation
def setup(self):
if self.config.hidden_size % self.config.num_attention_heads != 0 and not hasattr(
self.config, "embedding_size"
):
raise ValueError(
f"The hidden size {self.config.hidden_size,} is not a multiple of the number of attention "
f"heads {self.config.num_attention_heads}."
)
self.query = nn.Dense(
self.config.hidden_size,
dtype=self.dtype,
kernel_init=jax.nn.initializers.normal(self.config.initializer_range),
)
self.key = nn.Dense(
self.config.hidden_size,
dtype=self.dtype,
kernel_init=jax.nn.initializers.normal(self.config.initializer_range),
use_bias=False,
)
self.value = nn.Dense(
self.config.hidden_size,
dtype=self.dtype,
kernel_init=jax.nn.initializers.normal(self.config.initializer_range),
)
self.relative_position_bias = (
FlaxBeitRelativePositionBias(self.config, window_size=self.window_size, dtype=self.dtype)
if self.window_size
else None
)
def __call__(
self, hidden_states, relative_position_bias=None, deterministic: bool = True, output_attentions: bool = False
):
head_dim = self.config.hidden_size // self.config.num_attention_heads
query_states = self.query(hidden_states).reshape(
hidden_states.shape[:2] + (self.config.num_attention_heads, head_dim)
)
value_states = self.value(hidden_states).reshape(
hidden_states.shape[:2] + (self.config.num_attention_heads, head_dim)
)
key_states = self.key(hidden_states).reshape(
hidden_states.shape[:2] + (self.config.num_attention_heads, head_dim)
)
dropout_rng = None
if not deterministic and self.config.attention_probs_dropout_prob > 0.0:
dropout_rng = self.make_rng("dropout")
attention_bias = jnp.array(0.0, dtype=self.dtype)
# Add relative position bias if present.
if self.relative_position_bias is not None:
attention_bias = jnp.expand_dims(self.relative_position_bias(), 0)
attention_bias = attention_bias.astype(query_states.dtype)
# Add shared relative position bias if provided.
if relative_position_bias is not None:
attention_bias = attention_bias + relative_position_bias.astype(attention_bias.dtype)
attn_weights = dot_product_attention_weights(
query_states,
key_states,
bias=attention_bias,
dropout_rng=dropout_rng,
dropout_rate=self.config.attention_probs_dropout_prob,
broadcast_dropout=True,
deterministic=deterministic,
dtype=self.dtype,
precision=None,
)
attn_output = jnp.einsum("...hqk,...khd->...qhd", attn_weights, value_states)
attn_output = attn_output.reshape(attn_output.shape[:2] + (-1,))
outputs = (attn_output, attn_weights) if output_attentions else (attn_output,)
return outputs
class FlaxBeitSelfOutput(nn.Module):
config: BeitConfig
dtype: jnp.dtype = jnp.float32 # the dtype of the computation
def setup(self):
self.dense = nn.Dense(
self.config.hidden_size,
kernel_init=jax.nn.initializers.normal(self.config.initializer_range),
dtype=self.dtype,
)
self.dropout = nn.Dropout(rate=self.config.hidden_dropout_prob)
def __call__(self, hidden_states, deterministic: bool = True):
hidden_states = self.dense(hidden_states)
hidden_states = self.dropout(hidden_states, deterministic=deterministic)
return hidden_states
class FlaxBeitAttention(nn.Module):
config: BeitConfig
window_size: Tuple[int, int]
dtype: jnp.dtype = jnp.float32
def setup(self):
self.attention = FlaxBeitSelfAttention(self.config, self.window_size, dtype=self.dtype)
self.output = FlaxBeitSelfOutput(self.config, dtype=self.dtype)
def __call__(
self, hidden_states, relative_position_bias=None, deterministic=True, output_attentions: bool = False
):
attn_outputs = self.attention(
hidden_states, relative_position_bias, deterministic=deterministic, output_attentions=output_attentions
)
attn_output = attn_outputs[0]
attn_output = self.output(attn_output, deterministic=deterministic)
outputs = (attn_output,)
if output_attentions:
outputs += (attn_outputs[1],)
return outputs
class FlaxBeitIntermediate(nn.Module):
config: BeitConfig
dtype: jnp.dtype = jnp.float32 # the dtype of the computation
def setup(self):
self.dense = nn.Dense(
self.config.intermediate_size,
kernel_init=jax.nn.initializers.normal(self.config.initializer_range),
dtype=self.dtype,
)
self.activation = ACT2FN[self.config.hidden_act]
def __call__(self, hidden_states):
hidden_states = self.dense(hidden_states)
hidden_states = self.activation(hidden_states)
return hidden_states
class FlaxBeitOutput(nn.Module):
config: BeitConfig
dtype: jnp.dtype = jnp.float32 # the dtype of the computation
def setup(self):
self.dense = nn.Dense(
self.config.hidden_size,
kernel_init=jax.nn.initializers.normal(self.config.initializer_range),
dtype=self.dtype,
)
self.dropout = nn.Dropout(rate=self.config.hidden_dropout_prob)
def __call__(self, hidden_states, deterministic: bool = True):
hidden_states = self.dense(hidden_states)
hidden_states = self.dropout(hidden_states, deterministic=deterministic)
return hidden_states
class FlaxBeitLayer(nn.Module):
config: BeitConfig
window_size: Tuple[int, int]
drop_path_rate: float
dtype: jnp.dtype = jnp.float32 # the dtype of the computation
def setup(self):
self.attention = FlaxBeitAttention(self.config, self.window_size, dtype=self.dtype)
self.intermediate = FlaxBeitIntermediate(self.config, dtype=self.dtype)
self.output = FlaxBeitOutput(self.config, dtype=self.dtype)
self.layernorm_before = nn.LayerNorm(epsilon=self.config.layer_norm_eps, dtype=self.dtype)
self.drop_path = FlaxBeitDropPath(rate=self.drop_path_rate)
self.layernorm_after = nn.LayerNorm(epsilon=self.config.layer_norm_eps, dtype=self.dtype)
self.init_values = self.config.layer_scale_init_value
if self.init_values > 0:
self.lambda_1 = self.param("lambda_1", ones_with_scale, (self.config.hidden_size), self.init_values)
self.lambda_2 = self.param("lambda_2", ones_with_scale, (self.config.hidden_size), self.init_values)
else:
self.lambda_1 = None
self.lambda_2 = None
def __call__(
self, hidden_states, relative_position_bias=None, deterministic: bool = True, output_attentions: bool = False
):
self_attention_outputs = self.attention(
self.layernorm_before(hidden_states), # in BEiT, layernorm is applied before self-attention
relative_position_bias,
deterministic=deterministic,
output_attentions=output_attentions,
)
attention_output = self_attention_outputs[0]
# apply lambda_1 if present
if self.lambda_1 is not None:
attention_output = self.lambda_1.astype(attention_output.dtype) * attention_output
# first residual connection
hidden_states = self.drop_path(attention_output, deterministic=deterministic) + hidden_states
# in BEiT, layernorm is also applied after self-attention
layer_output = self.layernorm_after(hidden_states)
layer_output = self.intermediate(layer_output)
layer_output = self.output(layer_output, deterministic=deterministic)
# apply lambda_2 if present
if self.lambda_2 is not None:
layer_output = self.lambda_2.astype(layer_output.dtype) * layer_output
# second residual connection
layer_output = self.drop_path(layer_output, deterministic=deterministic) + hidden_states
outputs = (layer_output,)
if output_attentions:
outputs += (self_attention_outputs[1],)
return outputs
class FlaxBeitLayerCollection(nn.Module):
config: BeitConfig
window_size: Tuple[int, int]
drop_path_rates: List[float]
relative_position_bias: Callable[[], jnp.ndarray]
dtype: jnp.dtype = jnp.float32 # the dtype of the computation
def setup(self):
self.layers = [
FlaxBeitLayer(
self.config,
window_size=self.window_size if self.config.use_relative_position_bias else None,
drop_path_rate=self.drop_path_rates[i],
name=str(i),
dtype=self.dtype,
)
for i in range(self.config.num_hidden_layers)
]
def __call__(
self,
hidden_states,
deterministic: bool = True,
output_attentions: bool = False,
output_hidden_states: bool = False,
return_dict: bool = True,
):
all_attentions = () if output_attentions else None
all_hidden_states = () if output_hidden_states else None
for i, layer in enumerate(self.layers):
if output_hidden_states:
all_hidden_states += (hidden_states,)
relative_position_bias = self.relative_position_bias() if self.relative_position_bias is not None else None
layer_outputs = layer(
hidden_states, relative_position_bias, deterministic=deterministic, output_attentions=output_attentions
)
hidden_states = layer_outputs[0]
if output_attentions:
all_attentions += (layer_outputs[1],)
if output_hidden_states:
all_hidden_states += (hidden_states,)
outputs = (hidden_states,)
if not return_dict:
return tuple(v for v in outputs if v is not None)
return FlaxBaseModelOutput(
last_hidden_state=hidden_states, hidden_states=all_hidden_states, attentions=all_attentions
)
class FlaxBeitEncoder(nn.Module):
config: BeitConfig
window_size: Tuple[int, int]
dtype: jnp.dtype = jnp.float32 # the dtype of the computation
def setup(self):
if self.config.use_shared_relative_position_bias:
self.relative_position_bias = FlaxBeitRelativePositionBias(
config=self.config, window_size=self.window_size, dtype=self.dtype
)
# stochastic depth decay rule
drop_path_rates = list(np.linspace(0, self.config.drop_path_rate, self.config.num_hidden_layers))
self.layer = FlaxBeitLayerCollection(
self.config,
window_size=self.window_size,
drop_path_rates=drop_path_rates,
relative_position_bias=self.relative_position_bias
if self.config.use_shared_relative_position_bias
else None,
dtype=self.dtype,
)
def __call__(
self,
hidden_states,
deterministic: bool = True,
output_attentions: bool = False,
output_hidden_states: bool = False,
return_dict: bool = True,
):
return self.layer(
hidden_states,
deterministic=deterministic,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
class FlaxBeitPreTrainedModel(FlaxPreTrainedModel):
"""
An abstract class to handle weights initialization and a simple interface for downloading and loading pretrained
models.
"""
config_class = BeitConfig
base_model_prefix = "beit"
main_input_name = "pixel_values"
module_class: nn.Module = None
def __init__(
self,
config: BeitConfig,
input_shape=None,
seed: int = 0,
dtype: jnp.dtype = jnp.float32,
_do_init: bool = True,
**kwargs,
):
module = self.module_class(config=config, dtype=dtype, **kwargs)
if input_shape is None:
input_shape = (1, config.image_size, config.image_size, config.num_channels)
super().__init__(config, module, input_shape=input_shape, seed=seed, dtype=dtype, _do_init=_do_init)
def init_weights(self, rng: jax.random.PRNGKey, input_shape: Tuple, params: FrozenDict = None) -> FrozenDict:
# init input tensors
pixel_values = jnp.zeros(input_shape, dtype=self.dtype)
params_rng, dropout_rng = jax.random.split(rng)
dropout_rng, droppath_rng = jax.random.split(dropout_rng)
rngs = {"params": params_rng, "dropout": dropout_rng, "droppath": droppath_rng}
random_params = self.module.init(rngs, pixel_values, return_dict=False)["params"]
if params is not None:
random_params = flatten_dict(unfreeze(random_params))
params = flatten_dict(unfreeze(params))
for missing_key in self._missing_keys:
params[missing_key] = random_params[missing_key]
self._missing_keys = set()
return freeze(unflatten_dict(params))
else:
return random_params
@add_start_docstrings_to_model_forward(BEIT_INPUTS_DOCSTRING.format("batch_size, sequence_length"))
def __call__(
self,
pixel_values,
bool_masked_pos=None,
params: dict = None,
dropout_rng: jax.random.PRNGKey = None,
train: bool = False,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
):
output_attentions = output_attentions if output_attentions is not None else self.config.output_attentions
output_hidden_states = (
output_hidden_states if output_hidden_states is not None else self.config.output_hidden_states
)
return_dict = return_dict if return_dict is not None else self.config.return_dict
pixel_values = jnp.transpose(pixel_values, (0, 2, 3, 1))
# Handle any PRNG if needed
rngs = {}
if dropout_rng is not None:
dropout_rng, droppath_rng = jax.random.split(dropout_rng)
rngs["dropout"] = dropout_rng
rngs["droppath"] = droppath_rng
return self.module.apply(
{"params": params or self.params},
jnp.array(pixel_values, dtype=jnp.float32),
bool_masked_pos,
not train,
output_attentions,
output_hidden_states,
return_dict,
rngs=rngs,
)
class FlaxBeitPooler(nn.Module):
config: BeitConfig
dtype: jnp.dtype = jnp.float32 # the dtype of the computation
def setup(self):
if self.config.use_mean_pooling:
self.layernorm = nn.LayerNorm(epsilon=self.config.layer_norm_eps, dtype=self.dtype)
def __call__(self, hidden_states):
if self.config.use_mean_pooling:
# Mean pool the final hidden states of the patch tokens
patch_tokens = hidden_states[:, 1:, :]
pooled_output = self.layernorm(jnp.mean(patch_tokens, axis=1))
else:
# Pool by simply taking the final hidden state of the [CLS] token
pooled_output = hidden_states[:, 0]
return pooled_output
class FlaxBeitModule(nn.Module):
config: BeitConfig
dtype: jnp.dtype = jnp.float32 # the dtype of the computation
add_pooling_layer: bool = True
def setup(self):
self.embeddings = FlaxBeitEmbeddings(self.config, dtype=self.dtype)
self.encoder = FlaxBeitEncoder(
self.config, window_size=self.embeddings.patch_embeddings.patch_shape, dtype=self.dtype
)
if not self.config.use_mean_pooling:
self.layernorm = nn.LayerNorm(epsilon=self.config.layer_norm_eps, dtype=self.dtype)
self.pooler = FlaxBeitPooler(self.config, dtype=self.dtype) if self.add_pooling_layer else None
def __call__(
self,
pixel_values,
bool_masked_pos=None,
deterministic: bool = True,
output_attentions: bool = False,
output_hidden_states: bool = False,
return_dict: bool = True,
):
hidden_states = self.embeddings(pixel_values, bool_masked_pos, deterministic=deterministic)
outputs = self.encoder(
hidden_states,
deterministic=deterministic,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
hidden_states = outputs[0]
if not self.config.use_mean_pooling:
hidden_states = self.layernorm(hidden_states)
pooled = self.pooler(hidden_states) if self.add_pooling_layer else None
if not return_dict:
# if pooled is None, don't return it
if pooled is None:
return (hidden_states,) + outputs[1:]
return (hidden_states, pooled) + outputs[1:]
return FlaxBeitModelOutputWithPooling(
last_hidden_state=hidden_states,
pooler_output=pooled,
hidden_states=outputs.hidden_states,
attentions=outputs.attentions,
)
@add_start_docstrings(
"The bare Beit Model transformer outputting raw hidden-states without any specific head on top.",
BEIT_START_DOCSTRING,
)
class FlaxBeitModel(FlaxBeitPreTrainedModel):
module_class = FlaxBeitModule
FLAX_BEIT_MODEL_DOCSTRING = """
Returns:
Examples:
```python
>>> from transformers import AutoImageProcessor, FlaxBeitModel
>>> from PIL import Image
>>> import requests
>>> url = "http://images.cocodataset.org/val2017/000000039769.jpg"
>>> image = Image.open(requests.get(url, stream=True).raw)
>>> image_processor = AutoImageProcessor.from_pretrained("microsoft/beit-base-patch16-224-pt22k-ft22k")
>>> model = FlaxBeitModel.from_pretrained("microsoft/beit-base-patch16-224-pt22k-ft22k")
>>> inputs = image_processor(images=image, return_tensors="np")
>>> outputs = model(**inputs)
>>> last_hidden_states = outputs.last_hidden_state
```
"""
overwrite_call_docstring(FlaxBeitModel, FLAX_BEIT_MODEL_DOCSTRING)
append_replace_return_docstrings(FlaxBeitModel, output_type=FlaxBeitModelOutputWithPooling, config_class=BeitConfig)
class FlaxBeitForMaskedImageModelingModule(nn.Module):
config: BeitConfig
dtype: jnp.dtype = jnp.float32 # the dtype of the computation
def setup(self):
self.beit = FlaxBeitModule(self.config, add_pooling_layer=False, dtype=self.dtype)
# Classifier head
self.layernorm = nn.LayerNorm(epsilon=self.config.layer_norm_eps, dtype=self.dtype)
self.lm_head = nn.Dense(
self.config.vocab_size,
kernel_init=jax.nn.initializers.normal(self.config.initializer_range),
dtype=self.dtype,
)
def __call__(
self,
pixel_values=None,
bool_masked_pos=None,
deterministic: bool = True,
output_attentions=None,
output_hidden_states=None,
return_dict=None,
):
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
outputs = self.beit(
pixel_values,
bool_masked_pos,
deterministic=deterministic,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
sequence_output = outputs[0]
sequence_output = self.layernorm(sequence_output)
prediction_scores = self.lm_head(sequence_output[:, 1:])
if not return_dict:
output = (prediction_scores,) + outputs[2:]
return output
return FlaxMaskedLMOutput(
logits=prediction_scores,
hidden_states=outputs.hidden_states,
attentions=outputs.attentions,
)
@add_start_docstrings(
"Beit Model transformer with a 'language' modeling head on top (to predict visual tokens).",
BEIT_START_DOCSTRING,
)
class FlaxBeitForMaskedImageModeling(FlaxBeitPreTrainedModel):
module_class = FlaxBeitForMaskedImageModelingModule
FLAX_BEIT_MLM_DOCSTRING = """
bool_masked_pos (`numpy.ndarray` of shape `(batch_size, num_patches)`):
Boolean masked positions. Indicates which patches are masked (1) and which aren't (0).
Returns:
Examples:
```python
>>> from transformers import AutoImageProcessor, BeitForMaskedImageModeling
>>> from PIL import Image
>>> import requests
>>> url = "http://images.cocodataset.org/val2017/000000039769.jpg"
>>> image = Image.open(requests.get(url, stream=True).raw)
>>> image_processor = AutoImageProcessor.from_pretrained("microsoft/beit-base-patch16-224-pt22k")
>>> model = BeitForMaskedImageModeling.from_pretrained("microsoft/beit-base-patch16-224-pt22k")
>>> inputs = image_processor(images=image, return_tensors="np")
>>> outputs = model(**inputs)
>>> logits = outputs.logits
```
"""
overwrite_call_docstring(FlaxBeitForMaskedImageModeling, FLAX_BEIT_MLM_DOCSTRING)
append_replace_return_docstrings(
FlaxBeitForMaskedImageModeling, output_type=FlaxMaskedLMOutput, config_class=BeitConfig
)
class FlaxBeitForImageClassificationModule(nn.Module):
config: BeitConfig
dtype: jnp.dtype = jnp.float32
def setup(self):
self.beit = FlaxBeitModule(config=self.config, dtype=self.dtype, add_pooling_layer=True)
self.classifier = nn.Dense(
self.config.num_labels,
kernel_init=jax.nn.initializers.normal(self.config.initializer_range),
dtype=self.dtype,
)
def __call__(
self,
pixel_values=None,
bool_masked_pos=None,
deterministic: bool = True,
output_attentions=None,
output_hidden_states=None,
return_dict=None,
):
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
outputs = self.beit(
pixel_values,
deterministic=deterministic,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
pooled_output = outputs[1]
logits = self.classifier(pooled_output)
if not return_dict:
output = (logits,) + outputs[2:]
return output
return FlaxSequenceClassifierOutput(
logits=logits,
hidden_states=outputs.hidden_states,
attentions=outputs.attentions,
)
@add_start_docstrings(
"""
Beit Model transformer with an image classification head on top (a linear layer on top of the average of the final
hidden states of the patch tokens) e.g. for ImageNet.
""",
BEIT_START_DOCSTRING,
)
class FlaxBeitForImageClassification(FlaxBeitPreTrainedModel):
module_class = FlaxBeitForImageClassificationModule
FLAX_BEIT_CLASSIF_DOCSTRING = """
Returns:
Example:
```python
>>> from transformers import AutoImageProcessor, FlaxBeitForImageClassification
>>> from PIL import Image
>>> import requests
>>> url = "http://images.cocodataset.org/val2017/000000039769.jpg"
>>> image = Image.open(requests.get(url, stream=True).raw)
>>> image_processor = AutoImageProcessor.from_pretrained("microsoft/beit-base-patch16-224")
>>> model = FlaxBeitForImageClassification.from_pretrained("microsoft/beit-base-patch16-224")
>>> inputs = image_processor(images=image, return_tensors="np")
>>> outputs = model(**inputs)
>>> logits = outputs.logits
>>> # model predicts one of the 1000 ImageNet classes
>>> predicted_class_idx = logits.argmax(-1).item()
>>> print("Predicted class:", model.config.id2label[predicted_class_idx])
```
"""
overwrite_call_docstring(FlaxBeitForImageClassification, FLAX_BEIT_CLASSIF_DOCSTRING)
append_replace_return_docstrings(
FlaxBeitForImageClassification, output_type=FlaxSequenceClassifierOutput, config_class=BeitConfig
)
| 36,989 | 38.018987 | 153 | py |
transformers | transformers-main/src/transformers/models/beit/image_processing_beit.py | # coding=utf-8
# Copyright 2022 The HuggingFace Inc. team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
"""Image processor class for Beit."""
import warnings
from typing import Any, Dict, List, Optional, Tuple, Union
import numpy as np
from ...image_processing_utils import BaseImageProcessor, BatchFeature, get_size_dict
from ...image_transforms import center_crop, normalize, rescale, resize, to_channel_dimension_format
from ...image_utils import (
IMAGENET_STANDARD_MEAN,
IMAGENET_STANDARD_STD,
ChannelDimension,
ImageInput,
PILImageResampling,
make_list_of_images,
to_numpy_array,
valid_images,
)
from ...utils import TensorType, is_torch_available, is_torch_tensor, is_vision_available, logging
if is_vision_available():
import PIL
if is_torch_available():
import torch
logger = logging.get_logger(__name__)
class BeitImageProcessor(BaseImageProcessor):
r"""
Constructs a BEiT image processor.
Args:
do_resize (`bool`, *optional*, defaults to `True`):
Whether to resize the image's (height, width) dimensions to the specified `size`. Can be overridden by the
`do_resize` parameter in the `preprocess` method.
size (`Dict[str, int]` *optional*, defaults to `{"height": 256, "width": 256}`):
Size of the output image after resizing. Can be overridden by the `size` parameter in the `preprocess`
method.
resample (`PILImageResampling`, *optional*, defaults to `PILImageResampling.BICUBIC`):
Resampling filter to use if resizing the image. Can be overridden by the `resample` parameter in the
`preprocess` method.
do_center_crop (`bool`, *optional*, defaults to `True`):
Whether to center crop the image. If the input size is smaller than `crop_size` along any edge, the image
is padded with 0's and then center cropped. Can be overridden by the `do_center_crop` parameter in the
`preprocess` method.
crop_size (`Dict[str, int]`, *optional*, defaults to `{"height": 224, "width": 224}`):
Desired output size when applying center-cropping. Only has an effect if `do_center_crop` is set to `True`.
Can be overridden by the `crop_size` parameter in the `preprocess` method.
do_rescale (`bool`, *optional*, defaults to `True`):
Whether to rescale the image by the specified scale `rescale_factor`. Can be overridden by the `do_rescale`
parameter in the `preprocess` method.
rescale_factor (`int` or `float`, *optional*, defaults to `1/255`):
Scale factor to use if rescaling the image. Can be overridden by the `rescale_factor` parameter in the
`preprocess` method.
do_normalize (`bool`, *optional*, defaults to `True`):
Whether to normalize the image. Can be overridden by the `do_normalize` parameter in the `preprocess`
method.
image_mean (`float` or `List[float]`, *optional*, defaults to `IMAGENET_STANDARD_MEAN`):
The mean to use if normalizing the image. This is a float or list of floats of length of the number of
channels of the image. Can be overridden by the `image_mean` parameter in the `preprocess` method.
image_std (`float` or `List[float]`, *optional*, defaults to `IMAGENET_STANDARD_STD`):
The standard deviation to use if normalizing the image. This is a float or list of floats of length of the
number of channels of the image. Can be overridden by the `image_std` parameter in the `preprocess` method.
do_reduce_labels (`bool`, *optional*, defaults to `False`):
Whether or not to reduce all label values of segmentation maps by 1. Usually used for datasets where 0 is
used for background, and background itself is not included in all classes of a dataset (e.g. ADE20k). The
background label will be replaced by 255. Can be overridden by the `do_reduce_labels` parameter in the
`preprocess` method.
"""
model_input_names = ["pixel_values"]
def __init__(
self,
do_resize: bool = True,
size: Dict[str, int] = None,
resample: PILImageResampling = PILImageResampling.BICUBIC,
do_center_crop: bool = True,
crop_size: Dict[str, int] = None,
rescale_factor: Union[int, float] = 1 / 255,
do_rescale: bool = True,
do_normalize: bool = True,
image_mean: Optional[Union[float, List[float]]] = None,
image_std: Optional[Union[float, List[float]]] = None,
do_reduce_labels: bool = False,
**kwargs,
) -> None:
if "reduce_labels" in kwargs:
warnings.warn(
"The `reduce_labels` parameter is deprecated and will be removed in a future version. Please use"
" `do_reduce_labels` instead.",
FutureWarning,
)
do_reduce_labels = kwargs.pop("reduce_labels")
super().__init__(**kwargs)
size = size if size is not None else {"height": 256, "width": 256}
size = get_size_dict(size)
crop_size = crop_size if crop_size is not None else {"height": 224, "width": 224}
crop_size = get_size_dict(crop_size, param_name="crop_size")
self.do_resize = do_resize
self.size = size
self.resample = resample
self.do_center_crop = do_center_crop
self.crop_size = crop_size
self.do_rescale = do_rescale
self.rescale_factor = rescale_factor
self.do_normalize = do_normalize
self.image_mean = image_mean if image_mean is not None else IMAGENET_STANDARD_MEAN
self.image_std = image_std if image_std is not None else IMAGENET_STANDARD_STD
self.do_reduce_labels = do_reduce_labels
@classmethod
def from_dict(cls, image_processor_dict: Dict[str, Any], **kwargs):
"""
Overrides the `from_dict` method from the base class to make sure `reduce_labels` is updated if image processor
is created using from_dict and kwargs e.g. `BeitImageProcessor.from_pretrained(checkpoint, reduce_labels=True)`
"""
image_processor_dict = image_processor_dict.copy()
if "reduce_labels" in kwargs:
image_processor_dict["reduce_labels"] = kwargs.pop("reduce_labels")
return super().from_dict(image_processor_dict, **kwargs)
def resize(
self,
image: np.ndarray,
size: Dict[str, int],
resample: PILImageResampling = PILImageResampling.BICUBIC,
data_format: Optional[Union[str, ChannelDimension]] = None,
**kwargs,
) -> np.ndarray:
"""
Resize an image to (size["height"], size["width"]).
Args:
image (`np.ndarray`):
Image to resize.
size (`Dict[str, int]`):
Size of the output image.
resample (`PILImageResampling`, *optional*, defaults to `PIL.Image.BICUBIC`):
Resampling filter to use when resiizing the image.
data_format (`str` or `ChannelDimension`, *optional*):
The channel dimension format of the image. If not provided, it will be the same as the input image.
"""
size = get_size_dict(size, default_to_square=True, param_name="size")
if "height" not in size or "width" not in size:
raise ValueError(f"The `size` argument must contain `height` and `width` keys. Got {size.keys()}")
return resize(
image, size=(size["height"], size["width"]), resample=resample, data_format=data_format, **kwargs
)
def center_crop(
self,
image: np.ndarray,
size: Dict[str, int],
data_format: Optional[Union[str, ChannelDimension]] = None,
**kwargs,
) -> np.ndarray:
"""
Center crop an image to (size["height"], size["width"]). If the input size is smaller than `size` along any
edge, the image is padded with 0's and then center cropped.
Args:
image (`np.ndarray`):
Image to center crop.
size (`Dict[str, int]`):
Size of the output image.
data_format (`str` or `ChannelDimension`, *optional*):
The channel dimension format of the image. If not provided, it will be the same as the input image.
"""
size = get_size_dict(size, default_to_square=True, param_name="size")
return center_crop(image, size=(size["height"], size["width"]), data_format=data_format, **kwargs)
def rescale(
self,
image: np.ndarray,
scale: Union[int, float],
data_format: Optional[Union[str, ChannelDimension]] = None,
**kwargs,
):
"""
Rescale an image by a scale factor. image = image * scale.
Args:
image (`np.ndarray`):
Image to rescale.
scale (`int` or `float`):
Scale to apply to the image.
data_format (`str` or `ChannelDimension`, *optional*):
The channel dimension format of the image. If not provided, it will be the same as the input image.
"""
return rescale(image, scale=scale, data_format=data_format, **kwargs)
def normalize(
self,
image: np.ndarray,
mean: Union[float, List[float]],
std: Union[float, List[float]],
data_format: Optional[Union[str, ChannelDimension]] = None,
**kwargs,
) -> np.ndarray:
"""
Normalize an image. image = (image - image_mean) / image_std.
Args:
image (`np.ndarray`):
Image to normalize.
image_mean (`float` or `List[float]`):
Image mean.
image_std (`float` or `List[float]`):
Image standard deviation.
data_format (`str` or `ChannelDimension`, *optional*):
The channel dimension format of the image. If not provided, it will be the same as the input image.
"""
return normalize(image, mean=mean, std=std, data_format=data_format, **kwargs)
def reduce_label(self, label: ImageInput) -> np.ndarray:
label = to_numpy_array(label)
# Avoid using underflow conversion
label[label == 0] = 255
label = label - 1
label[label == 254] = 255
return label
def _preprocess(
self,
image: ImageInput,
do_reduce_labels: bool = None,
do_resize: bool = None,
size: Dict[str, int] = None,
resample: PILImageResampling = None,
do_center_crop: bool = None,
crop_size: Dict[str, int] = None,
do_rescale: bool = None,
rescale_factor: float = None,
do_normalize: bool = None,
image_mean: Optional[Union[float, List[float]]] = None,
image_std: Optional[Union[float, List[float]]] = None,
):
if do_reduce_labels:
image = self.reduce_label(image)
if do_resize:
image = self.resize(image=image, size=size, resample=resample)
if do_center_crop:
image = self.center_crop(image=image, size=crop_size)
if do_rescale:
image = self.rescale(image=image, scale=rescale_factor)
if do_normalize:
image = self.normalize(image=image, mean=image_mean, std=image_std)
return image
def _preprocess_image(
self,
image: ImageInput,
do_resize: bool = None,
size: Dict[str, int] = None,
resample: PILImageResampling = None,
do_center_crop: bool = None,
crop_size: Dict[str, int] = None,
do_rescale: bool = None,
rescale_factor: float = None,
do_normalize: bool = None,
image_mean: Optional[Union[float, List[float]]] = None,
image_std: Optional[Union[float, List[float]]] = None,
data_format: Optional[Union[str, ChannelDimension]] = None,
) -> np.ndarray:
"""Preprocesses a single image."""
# All transformations expect numpy arrays.
image = to_numpy_array(image)
image = self._preprocess(
image,
do_reduce_labels=False,
do_resize=do_resize,
size=size,
resample=resample,
do_center_crop=do_center_crop,
crop_size=crop_size,
do_rescale=do_rescale,
rescale_factor=rescale_factor,
do_normalize=do_normalize,
image_mean=image_mean,
image_std=image_std,
)
if data_format is not None:
image = to_channel_dimension_format(image, data_format)
return image
def _preprocess_segmentation_map(
self,
segmentation_map: ImageInput,
do_resize: bool = None,
size: Dict[str, int] = None,
resample: PILImageResampling = None,
do_center_crop: bool = None,
crop_size: Dict[str, int] = None,
do_reduce_labels: bool = None,
):
"""Preprocesses a single segmentation map."""
# All transformations expect numpy arrays.
segmentation_map = to_numpy_array(segmentation_map)
# Add an axis to the segmentation maps for transformations.
if segmentation_map.ndim == 2:
segmentation_map = segmentation_map[None, ...]
added_dimension = True
else:
added_dimension = False
segmentation_map = self._preprocess(
image=segmentation_map,
do_reduce_labels=do_reduce_labels,
do_resize=do_resize,
resample=resample,
size=size,
do_center_crop=do_center_crop,
crop_size=crop_size,
do_normalize=False,
do_rescale=False,
)
# Remove extra axis if added
if added_dimension:
segmentation_map = np.squeeze(segmentation_map, axis=0)
segmentation_map = segmentation_map.astype(np.int64)
return segmentation_map
def __call__(self, images, segmentation_maps=None, **kwargs):
# Overrides the `__call__` method of the `Preprocessor` class such that the images and segmentation maps can both
# be passed in as positional arguments.
return super().__call__(images, segmentation_maps=segmentation_maps, **kwargs)
def preprocess(
self,
images: ImageInput,
segmentation_maps: Optional[ImageInput] = None,
do_resize: bool = None,
size: Dict[str, int] = None,
resample: PILImageResampling = None,
do_center_crop: bool = None,
crop_size: Dict[str, int] = None,
do_rescale: bool = None,
rescale_factor: float = None,
do_normalize: bool = None,
image_mean: Optional[Union[float, List[float]]] = None,
image_std: Optional[Union[float, List[float]]] = None,
do_reduce_labels: Optional[bool] = None,
return_tensors: Optional[Union[str, TensorType]] = None,
data_format: ChannelDimension = ChannelDimension.FIRST,
**kwargs,
) -> PIL.Image.Image:
"""
Preprocess an image or batch of images.
Args:
images (`ImageInput`):
Image to preprocess.
do_resize (`bool`, *optional*, defaults to `self.do_resize`):
Whether to resize the image.
size (`Dict[str, int]`, *optional*, defaults to `self.size`):
Size of the image after resizing.
resample (`int`, *optional*, defaults to `self.resample`):
Resampling filter to use if resizing the image. This can be one of the enum `PILImageResampling`, Only
has an effect if `do_resize` is set to `True`.
do_center_crop (`bool`, *optional*, defaults to `self.do_center_crop`):
Whether to center crop the image.
crop_size (`Dict[str, int]`, *optional*, defaults to `self.crop_size`):
Size of the image after center crop. If one edge the image is smaller than `crop_size`, it will be
padded with zeros and then cropped
do_rescale (`bool`, *optional*, defaults to `self.do_rescale`):
Whether to rescale the image values between [0 - 1].
rescale_factor (`float`, *optional*, defaults to `self.rescale_factor`):
Rescale factor to rescale the image by if `do_rescale` is set to `True`.
do_normalize (`bool`, *optional*, defaults to `self.do_normalize`):
Whether to normalize the image.
image_mean (`float` or `List[float]`, *optional*, defaults to `self.image_mean`):
Image mean.
image_std (`float` or `List[float]`, *optional*, defaults to `self.image_std`):
Image standard deviation.
do_reduce_labels (`bool`, *optional*, defaults to `self.do_reduce_labels`):
Whether or not to reduce all label values of segmentation maps by 1. Usually used for datasets where 0
is used for background, and background itself is not included in all classes of a dataset (e.g.
ADE20k). The background label will be replaced by 255.
return_tensors (`str` or `TensorType`, *optional*):
The type of tensors to return. Can be one of:
- Unset: Return a list of `np.ndarray`.
- `TensorType.TENSORFLOW` or `'tf'`: Return a batch of type `tf.Tensor`.
- `TensorType.PYTORCH` or `'pt'`: Return a batch of type `torch.Tensor`.
- `TensorType.NUMPY` or `'np'`: Return a batch of type `np.ndarray`.
- `TensorType.JAX` or `'jax'`: Return a batch of type `jax.numpy.ndarray`.
data_format (`ChannelDimension` or `str`, *optional*, defaults to `ChannelDimension.FIRST`):
The channel dimension format for the output image. Can be one of:
- `ChannelDimension.FIRST`: image in (num_channels, height, width) format.
- `ChannelDimension.LAST`: image in (height, width, num_channels) format.
"""
do_resize = do_resize if do_resize is not None else self.do_resize
size = size if size is not None else self.size
size = get_size_dict(size, default_to_square=True, param_name="size")
resample = resample if resample is not None else self.resample
do_center_crop = do_center_crop if do_center_crop is not None else self.do_center_crop
crop_size = crop_size if crop_size is not None else self.crop_size
crop_size = get_size_dict(crop_size, default_to_square=True, param_name="crop_size")
do_rescale = do_rescale if do_rescale is not None else self.do_rescale
rescale_factor = rescale_factor if rescale_factor is not None else self.rescale_factor
do_normalize = do_normalize if do_normalize is not None else self.do_normalize
image_mean = image_mean if image_mean is not None else self.image_mean
image_std = image_std if image_std is not None else self.image_std
do_reduce_labels = do_reduce_labels if do_reduce_labels is not None else self.do_reduce_labels
images = make_list_of_images(images)
if segmentation_maps is not None:
segmentation_maps = make_list_of_images(segmentation_maps, expected_ndims=2)
if not valid_images(images):
raise ValueError(
"Invalid image type. Must be of type PIL.Image.Image, numpy.ndarray, "
"torch.Tensor, tf.Tensor or jax.ndarray."
)
if segmentation_maps is not None and not valid_images(segmentation_maps):
raise ValueError(
"Invalid segmentation map type. Must be of type PIL.Image.Image, numpy.ndarray, "
"torch.Tensor, tf.Tensor or jax.ndarray."
)
if do_resize and size is None or resample is None:
raise ValueError("Size and resample must be specified if do_resize is True.")
if do_center_crop and crop_size is None:
raise ValueError("Crop size must be specified if do_center_crop is True.")
if do_rescale and rescale_factor is None:
raise ValueError("Rescale factor must be specified if do_rescale is True.")
if do_normalize and (image_mean is None or image_std is None):
raise ValueError("Image mean and std must be specified if do_normalize is True.")
images = [
self._preprocess_image(
image=img,
do_resize=do_resize,
do_center_crop=do_center_crop,
do_rescale=do_rescale,
do_normalize=do_normalize,
resample=resample,
size=size,
rescale_factor=rescale_factor,
crop_size=crop_size,
image_mean=image_mean,
image_std=image_std,
data_format=data_format,
)
for img in images
]
data = {"pixel_values": images}
if segmentation_maps is not None:
segmentation_maps = [
self._preprocess_segmentation_map(
segmentation_map=segmentation_map,
do_reduce_labels=do_reduce_labels,
do_resize=do_resize,
resample=resample,
size=size,
do_center_crop=do_center_crop,
crop_size=crop_size,
)
for segmentation_map in segmentation_maps
]
data["labels"] = segmentation_maps
return BatchFeature(data=data, tensor_type=return_tensors)
def post_process_semantic_segmentation(self, outputs, target_sizes: List[Tuple] = None):
"""
Converts the output of [`BeitForSemanticSegmentation`] into semantic segmentation maps. Only supports PyTorch.
Args:
outputs ([`BeitForSemanticSegmentation`]):
Raw outputs of the model.
target_sizes (`List[Tuple]` of length `batch_size`, *optional*):
List of tuples corresponding to the requested final size (height, width) of each prediction. If left to
None, predictions will not be resized.
Returns:
semantic_segmentation: `List[torch.Tensor]` of length `batch_size`, where each item is a semantic
segmentation map of shape (height, width) corresponding to the target_sizes entry (if `target_sizes` is
specified). Each entry of each `torch.Tensor` correspond to a semantic class id.
"""
# TODO: add support for other frameworks
logits = outputs.logits
# Resize logits and compute semantic segmentation maps
if target_sizes is not None:
if len(logits) != len(target_sizes):
raise ValueError(
"Make sure that you pass in as many target sizes as the batch dimension of the logits"
)
if is_torch_tensor(target_sizes):
target_sizes = target_sizes.numpy()
semantic_segmentation = []
for idx in range(len(logits)):
resized_logits = torch.nn.functional.interpolate(
logits[idx].unsqueeze(dim=0), size=target_sizes[idx], mode="bilinear", align_corners=False
)
semantic_map = resized_logits[0].argmax(dim=0)
semantic_segmentation.append(semantic_map)
else:
semantic_segmentation = logits.argmax(dim=1)
semantic_segmentation = [semantic_segmentation[i] for i in range(semantic_segmentation.shape[0])]
return semantic_segmentation
| 24,407 | 44.62243 | 121 | py |
transformers | transformers-main/src/transformers/models/beit/__init__.py | # Copyright 2021 The HuggingFace Team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
from typing import TYPE_CHECKING
from ...utils import (
OptionalDependencyNotAvailable,
_LazyModule,
is_flax_available,
is_torch_available,
is_vision_available,
)
_import_structure = {"configuration_beit": ["BEIT_PRETRAINED_CONFIG_ARCHIVE_MAP", "BeitConfig", "BeitOnnxConfig"]}
try:
if not is_vision_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
_import_structure["feature_extraction_beit"] = ["BeitFeatureExtractor"]
_import_structure["image_processing_beit"] = ["BeitImageProcessor"]
try:
if not is_torch_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
_import_structure["modeling_beit"] = [
"BEIT_PRETRAINED_MODEL_ARCHIVE_LIST",
"BeitForImageClassification",
"BeitForMaskedImageModeling",
"BeitForSemanticSegmentation",
"BeitModel",
"BeitPreTrainedModel",
]
try:
if not is_flax_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
_import_structure["modeling_flax_beit"] = [
"FlaxBeitForImageClassification",
"FlaxBeitForMaskedImageModeling",
"FlaxBeitModel",
"FlaxBeitPreTrainedModel",
]
if TYPE_CHECKING:
from .configuration_beit import BEIT_PRETRAINED_CONFIG_ARCHIVE_MAP, BeitConfig, BeitOnnxConfig
try:
if not is_vision_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
from .feature_extraction_beit import BeitFeatureExtractor
from .image_processing_beit import BeitImageProcessor
try:
if not is_torch_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
from .modeling_beit import (
BEIT_PRETRAINED_MODEL_ARCHIVE_LIST,
BeitForImageClassification,
BeitForMaskedImageModeling,
BeitForSemanticSegmentation,
BeitModel,
BeitPreTrainedModel,
)
try:
if not is_flax_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
from .modeling_flax_beit import (
FlaxBeitForImageClassification,
FlaxBeitForMaskedImageModeling,
FlaxBeitModel,
FlaxBeitPreTrainedModel,
)
else:
import sys
sys.modules[__name__] = _LazyModule(__name__, globals()["__file__"], _import_structure, module_spec=__spec__)
| 3,289 | 28.63964 | 114 | py |
transformers | transformers-main/src/transformers/models/altclip/processing_altclip.py | # coding=utf-8
# Copyright 2022 WenXiang ZhongzhiCheng LedellWu LiuGuang BoWenZhang The HuggingFace Inc. team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
"""
Image/Text processor class for AltCLIP
"""
import warnings
from ...processing_utils import ProcessorMixin
from ...tokenization_utils_base import BatchEncoding
class AltCLIPProcessor(ProcessorMixin):
r"""
Constructs a AltCLIP processor which wraps a CLIP image processor and a XLM-Roberta tokenizer into a single
processor.
[`AltCLIPProcessor`] offers all the functionalities of [`CLIPImageProcessor`] and [`XLMRobertaTokenizerFast`]. See
the [`~AltCLIPProcessor.__call__`] and [`~AltCLIPProcessor.decode`] for more information.
Args:
image_processor ([`CLIPImageProcessor`]):
The image processor is a required input.
tokenizer ([`XLMRobertaTokenizerFast`]):
The tokenizer is a required input.
"""
attributes = ["image_processor", "tokenizer"]
image_processor_class = "CLIPImageProcessor"
tokenizer_class = ("XLMRobertaTokenizer", "XLMRobertaTokenizerFast")
def __init__(self, image_processor=None, tokenizer=None, **kwargs):
feature_extractor = None
if "feature_extractor" in kwargs:
warnings.warn(
"The `feature_extractor` argument is deprecated and will be removed in v5, use `image_processor`"
" instead.",
FutureWarning,
)
feature_extractor = kwargs.pop("feature_extractor")
image_processor = image_processor if image_processor is not None else feature_extractor
if image_processor is None:
raise ValueError("You need to specify an `image_processor`.")
if tokenizer is None:
raise ValueError("You need to specify a `tokenizer`.")
super().__init__(image_processor, tokenizer)
def __call__(self, text=None, images=None, return_tensors=None, **kwargs):
"""
Main method to prepare for the model one or several sequences(s) and image(s). This method forwards the `text`
and `kwargs` arguments to XLMRobertaTokenizerFast's [`~XLMRobertaTokenizerFast.__call__`] if `text` is not
`None` to encode the text. To prepare the image(s), this method forwards the `images` and `kwrags` arguments to
CLIPImageProcessor's [`~CLIPImageProcessor.__call__`] if `images` is not `None`. Please refer to the doctsring
of the above two methods for more information.
Args:
text (`str`, `List[str]`, `List[List[str]]`):
The sequence or batch of sequences to be encoded. Each sequence can be a string or a list of strings
(pretokenized string). If the sequences are provided as list of strings (pretokenized), you must set
`is_split_into_words=True` (to lift the ambiguity with a batch of sequences).
images (`PIL.Image.Image`, `np.ndarray`, `torch.Tensor`, `List[PIL.Image.Image]`, `List[np.ndarray]`, `List[torch.Tensor]`):
The image or batch of images to be prepared. Each image can be a PIL image, NumPy array or PyTorch
tensor. In case of a NumPy array/PyTorch tensor, each image should be of shape (C, H, W), where C is a
number of channels, H and W are image height and width.
return_tensors (`str` or [`~utils.TensorType`], *optional*):
If set, will return tensors of a particular framework. Acceptable values are:
- `'tf'`: Return TensorFlow `tf.constant` objects.
- `'pt'`: Return PyTorch `torch.Tensor` objects.
- `'np'`: Return NumPy `np.ndarray` objects.
- `'jax'`: Return JAX `jnp.ndarray` objects.
Returns:
[`BatchEncoding`]: A [`BatchEncoding`] with the following fields:
- **input_ids** -- List of token ids to be fed to a model. Returned when `text` is not `None`.
- **attention_mask** -- List of indices specifying which tokens should be attended to by the model (when
`return_attention_mask=True` or if *"attention_mask"* is in `self.model_input_names` and if `text` is not
`None`).
- **pixel_values** -- Pixel values to be fed to a model. Returned when `images` is not `None`.
"""
if text is None and images is None:
raise ValueError("You have to specify either text or images. Both cannot be none.")
if text is not None:
encoding = self.tokenizer(text, return_tensors=return_tensors, **kwargs)
if images is not None:
image_features = self.image_processor(images, return_tensors=return_tensors, **kwargs)
if text is not None and images is not None:
encoding["pixel_values"] = image_features.pixel_values
return encoding
elif text is not None:
return encoding
else:
return BatchEncoding(data=dict(**image_features), tensor_type=return_tensors)
def batch_decode(self, *args, **kwargs):
"""
This method forwards all its arguments to XLMRobertaTokenizerFast's [`~PreTrainedTokenizer.batch_decode`].
Please refer to the docstring of this method for more information.
"""
return self.tokenizer.batch_decode(*args, **kwargs)
def decode(self, *args, **kwargs):
"""
This method forwards all its arguments to XLMRobertaTokenizerFast's [`~PreTrainedTokenizer.decode`]. Please
refer to the docstring of this method for more information.
"""
return self.tokenizer.decode(*args, **kwargs)
@property
def model_input_names(self):
tokenizer_input_names = self.tokenizer.model_input_names
image_processor_input_names = self.image_processor.model_input_names
return list(dict.fromkeys(tokenizer_input_names + image_processor_input_names))
| 6,477 | 48.075758 | 136 | py |
transformers | transformers-main/src/transformers/models/altclip/__init__.py | # Copyright 2020 The HuggingFace Team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
from typing import TYPE_CHECKING
from ...utils import OptionalDependencyNotAvailable, _LazyModule, is_tokenizers_available, is_torch_available
_import_structure = {
"configuration_altclip": [
"ALTCLIP_PRETRAINED_CONFIG_ARCHIVE_MAP",
"AltCLIPConfig",
"AltCLIPTextConfig",
"AltCLIPVisionConfig",
],
"processing_altclip": ["AltCLIPProcessor"],
}
try:
if not is_torch_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
_import_structure["modeling_altclip"] = [
"ALTCLIP_PRETRAINED_MODEL_ARCHIVE_LIST",
"AltCLIPPreTrainedModel",
"AltCLIPModel",
"AltCLIPTextModel",
"AltCLIPVisionModel",
]
if TYPE_CHECKING:
from .configuration_altclip import (
ALTCLIP_PRETRAINED_CONFIG_ARCHIVE_MAP,
AltCLIPConfig,
AltCLIPTextConfig,
AltCLIPVisionConfig,
)
from .processing_altclip import AltCLIPProcessor
try:
if not is_torch_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
from .modeling_altclip import (
ALTCLIP_PRETRAINED_MODEL_ARCHIVE_LIST,
AltCLIPModel,
AltCLIPPreTrainedModel,
AltCLIPTextModel,
AltCLIPVisionModel,
)
else:
import sys
sys.modules[__name__] = _LazyModule(__name__, globals()["__file__"], _import_structure, module_spec=__spec__)
| 2,126 | 28.541667 | 113 | py |
transformers | transformers-main/src/transformers/models/altclip/modeling_altclip.py | # coding=utf-8
# Copyright 2022 The BAAI Teams Authors and The HuggingFace Inc. team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
""" PyTorch AltCLIP model."""
import math
from dataclasses import dataclass
from typing import Any, List, Optional, Tuple, Union
import torch
import torch.nn as nn
import torch.utils.checkpoint
from ...activations import ACT2FN
from ...modeling_outputs import (
BaseModelOutput,
BaseModelOutputWithPastAndCrossAttentions,
BaseModelOutputWithPooling,
BaseModelOutputWithPoolingAndCrossAttentions,
BaseModelOutputWithPoolingAndProjection,
)
from ...modeling_utils import PreTrainedModel
from ...pytorch_utils import apply_chunking_to_forward, find_pruneable_heads_and_indices, prune_linear_layer
from ...utils import ModelOutput, add_start_docstrings_to_model_forward, logging, replace_return_docstrings
from .configuration_altclip import AltCLIPConfig, AltCLIPTextConfig, AltCLIPVisionConfig
logger = logging.get_logger(__name__)
_CHECKPOINT_FOR_DOC = "BAAI/AltCLIP"
_CONFIG_FOR_DOC = "AltCLIPConfig"
ALTCLIP_PRETRAINED_MODEL_ARCHIVE_LIST = [
"BAAI/AltCLIP",
# See all AltCLIP models at https://huggingface.co/models?filter=altclip
]
ALTCLIP_START_DOCSTRING = r"""
This model inherits from [`PreTrainedModel`]. Check the superclass documentation for the generic methods the
library implements for all its model (such as downloading or saving, resizing the input embeddings, pruning heads
etc.)
This model is also a PyTorch [torch.nn.Module](https://pytorch.org/docs/stable/nn.html#torch.nn.Module) subclass.
Use it as a regular PyTorch Module and refer to the PyTorch documentation for all matter related to general usage
and behavior.
Parameters:
config ([`CLIPConfig`]): Model configuration class with all the parameters of the model.
Initializing with a config file does not load the weights associated with the model, only the
configuration. Check out the [`~PreTrainedModel.from_pretrained`] method to load the model weights.
"""
ALTCLIP_TEXT_INPUTS_DOCSTRING = r"""
Args:
input_ids (`torch.LongTensor` of shape `(batch_size, sequence_length)`):
Indices of input sequence tokens in the vocabulary. Padding will be ignored by default should you provide
it.
Indices can be obtained using [`AutoTokenizer`]. See [`PreTrainedTokenizer.encode`] and
[`PreTrainedTokenizer.__call__`] for details.
[What are input IDs?](../glossary#input-ids)
attention_mask (`torch.Tensor` of shape `(batch_size, sequence_length)`, *optional*):
Mask to avoid performing attention on padding token indices. Mask values selected in `[0, 1]`:
- 1 for tokens that are **not masked**,
- 0 for tokens that are **masked**.
[What are attention masks?](../glossary#attention-mask)
position_ids (`torch.LongTensor` of shape `(batch_size, sequence_length)`, *optional*):
Indices of positions of each input sequence tokens in the position embeddings. Selected in the range `[0,
config.max_position_embeddings - 1]`.
[What are position IDs?](../glossary#position-ids)
output_attentions (`bool`, *optional*):
Whether or not to return the attentions tensors of all attention layers. See `attentions` under returned
tensors for more detail.
output_hidden_states (`bool`, *optional*):
Whether or not to return the hidden states of all layers. See `hidden_states` under returned tensors for
more detail.
return_dict (`bool`, *optional*):
Whether or not to return a [`~utils.ModelOutput`] instead of a plain tuple.
"""
ALTCLIP_VISION_INPUTS_DOCSTRING = r"""
Args:
pixel_values (`torch.FloatTensor` of shape `(batch_size, num_channels, height, width)`):
Pixel values. Padding will be ignored by default should you provide it. Pixel values can be obtained using
[`AutoImageProcessor`]. See [`CLIPImageProcessor.__call__`] for details.
output_attentions (`bool`, *optional*):
Whether or not to return the attentions tensors of all attention layers. See `attentions` under returned
tensors for more detail.
output_hidden_states (`bool`, *optional*):
Whether or not to return the hidden states of all layers. See `hidden_states` under returned tensors for
more detail.
return_dict (`bool`, *optional*):
Whether or not to return a [`~utils.ModelOutput`] instead of a plain tuple.
"""
ALTCLIP_INPUTS_DOCSTRING = r"""
Args:
input_ids (`torch.LongTensor` of shape `(batch_size, sequence_length)`):
Indices of input sequence tokens in the vocabulary. Padding will be ignored by default should you provide
it.
Indices can be obtained using [`AutoTokenizer`]. See [`PreTrainedTokenizer.encode`] and
[`PreTrainedTokenizer.__call__`] for details.
[What are input IDs?](../glossary#input-ids)
attention_mask (`torch.Tensor` of shape `(batch_size, sequence_length)`, *optional*):
Mask to avoid performing attention on padding token indices. Mask values selected in `[0, 1]`:
- 1 for tokens that are **not masked**,
- 0 for tokens that are **masked**.
[What are attention masks?](../glossary#attention-mask)
position_ids (`torch.LongTensor` of shape `(batch_size, sequence_length)`, *optional*):
Indices of positions of each input sequence tokens in the position embeddings. Selected in the range `[0,
config.max_position_embeddings - 1]`.
[What are position IDs?](../glossary#position-ids)
pixel_values (`torch.FloatTensor` of shape `(batch_size, num_channels, height, width)`):
Pixel values. Padding will be ignored by default should you provide it. Pixel values can be obtained using
[`AutoImageProcessor`]. See [`CLIPImageProcessor.__call__`] for details.
return_loss (`bool`, *optional*):
Whether or not to return the contrastive loss.
output_attentions (`bool`, *optional*):
Whether or not to return the attentions tensors of all attention layers. See `attentions` under returned
tensors for more detail.
output_hidden_states (`bool`, *optional*):
Whether or not to return the hidden states of all layers. See `hidden_states` under returned tensors for
more detail.
return_dict (`bool`, *optional*):
Whether or not to return a [`~utils.ModelOutput`] instead of a plain tuple.
"""
# contrastive loss function, adapted from
# https://sachinruk.github.io/blog/pytorch/pytorch%20lightning/loss%20function/gpu/2021/03/07/CLIP.html
def contrastive_loss(logits: torch.Tensor) -> torch.Tensor:
return nn.functional.cross_entropy(logits, torch.arange(len(logits), device=logits.device))
def clip_loss(similarity: torch.Tensor) -> torch.Tensor:
caption_loss = contrastive_loss(similarity)
image_loss = contrastive_loss(similarity.t())
return (caption_loss + image_loss) / 2.0
@dataclass
# Copied from transformers.models.clip.modeling_clip.CLIPOutput with CLIP->AltCLIP
class AltCLIPOutput(ModelOutput):
"""
Args:
loss (`torch.FloatTensor` of shape `(1,)`, *optional*, returned when `return_loss` is `True`):
Contrastive loss for image-text similarity.
logits_per_image:(`torch.FloatTensor` of shape `(image_batch_size, text_batch_size)`):
The scaled dot product scores between `image_embeds` and `text_embeds`. This represents the image-text
similarity scores.
logits_per_text:(`torch.FloatTensor` of shape `(text_batch_size, image_batch_size)`):
The scaled dot product scores between `text_embeds` and `image_embeds`. This represents the text-image
similarity scores.
text_embeds(`torch.FloatTensor` of shape `(batch_size, output_dim`):
The text embeddings obtained by applying the projection layer to the pooled output of [`AltCLIPTextModel`].
image_embeds(`torch.FloatTensor` of shape `(batch_size, output_dim`):
The image embeddings obtained by applying the projection layer to the pooled output of
[`AltCLIPVisionModel`].
text_model_output(`BaseModelOutputWithPooling`):
The output of the [`AltCLIPTextModel`].
vision_model_output(`BaseModelOutputWithPooling`):
The output of the [`AltCLIPVisionModel`].
"""
loss: Optional[torch.FloatTensor] = None
logits_per_image: torch.FloatTensor = None
logits_per_text: torch.FloatTensor = None
text_embeds: torch.FloatTensor = None
image_embeds: torch.FloatTensor = None
text_model_output: BaseModelOutputWithPooling = None
vision_model_output: BaseModelOutputWithPooling = None
def to_tuple(self) -> Tuple[Any]:
return tuple(
self[k] if k not in ["text_model_output", "vision_model_output"] else getattr(self, k).to_tuple()
for k in self.keys()
)
# Copied from transformers.models.roberta.modeling_roberta.RobertaEmbeddings with Roberta->AltRoberta
class AltRobertaEmbeddings(nn.Module):
"""
Same as BertEmbeddings with a tiny tweak for positional embeddings indexing.
"""
# Copied from transformers.models.bert.modeling_bert.BertEmbeddings.__init__
def __init__(self, config):
super().__init__()
self.word_embeddings = nn.Embedding(config.vocab_size, config.hidden_size, padding_idx=config.pad_token_id)
self.position_embeddings = nn.Embedding(config.max_position_embeddings, config.hidden_size)
self.token_type_embeddings = nn.Embedding(config.type_vocab_size, config.hidden_size)
# self.LayerNorm is not snake-cased to stick with TensorFlow model variable name and be able to load
# any TensorFlow checkpoint file
self.LayerNorm = nn.LayerNorm(config.hidden_size, eps=config.layer_norm_eps)
self.dropout = nn.Dropout(config.hidden_dropout_prob)
# position_ids (1, len position emb) is contiguous in memory and exported when serialized
self.position_embedding_type = getattr(config, "position_embedding_type", "absolute")
self.register_buffer(
"position_ids", torch.arange(config.max_position_embeddings).expand((1, -1)), persistent=False
)
self.register_buffer(
"token_type_ids", torch.zeros(self.position_ids.size(), dtype=torch.long), persistent=False
)
# End copy
self.padding_idx = config.pad_token_id
self.position_embeddings = nn.Embedding(
config.max_position_embeddings, config.hidden_size, padding_idx=self.padding_idx
)
def forward(
self, input_ids=None, token_type_ids=None, position_ids=None, inputs_embeds=None, past_key_values_length=0
):
if position_ids is None:
if input_ids is not None:
# Create the position ids from the input token ids. Any padded tokens remain padded.
position_ids = create_position_ids_from_input_ids(input_ids, self.padding_idx, past_key_values_length)
else:
position_ids = self.create_position_ids_from_inputs_embeds(inputs_embeds)
if input_ids is not None:
input_shape = input_ids.size()
else:
input_shape = inputs_embeds.size()[:-1]
seq_length = input_shape[1]
# Setting the token_type_ids to the registered buffer in constructor where it is all zeros, which usually occurs
# when its auto-generated, registered buffer helps users when tracing the model without passing token_type_ids, solves
# issue #5664
if token_type_ids is None:
if hasattr(self, "token_type_ids"):
buffered_token_type_ids = self.token_type_ids[:, :seq_length]
buffered_token_type_ids_expanded = buffered_token_type_ids.expand(input_shape[0], seq_length)
token_type_ids = buffered_token_type_ids_expanded
else:
token_type_ids = torch.zeros(input_shape, dtype=torch.long, device=self.position_ids.device)
if inputs_embeds is None:
inputs_embeds = self.word_embeddings(input_ids)
token_type_embeddings = self.token_type_embeddings(token_type_ids)
embeddings = inputs_embeds + token_type_embeddings
if self.position_embedding_type == "absolute":
position_embeddings = self.position_embeddings(position_ids)
embeddings += position_embeddings
embeddings = self.LayerNorm(embeddings)
embeddings = self.dropout(embeddings)
return embeddings
def create_position_ids_from_inputs_embeds(self, inputs_embeds):
"""
We are provided embeddings directly. We cannot infer which are padded so just generate sequential position ids.
Args:
inputs_embeds: torch.Tensor
Returns: torch.Tensor
"""
input_shape = inputs_embeds.size()[:-1]
sequence_length = input_shape[1]
position_ids = torch.arange(
self.padding_idx + 1, sequence_length + self.padding_idx + 1, dtype=torch.long, device=inputs_embeds.device
)
return position_ids.unsqueeze(0).expand(input_shape)
# Copied from transformers.models.roberta.modeling_roberta.RobertaSelfAttention with Roberta->AltRoberta
class AltRobertaSelfAttention(nn.Module):
def __init__(self, config, position_embedding_type=None):
super().__init__()
if config.hidden_size % config.num_attention_heads != 0 and not hasattr(config, "embedding_size"):
raise ValueError(
f"The hidden size ({config.hidden_size}) is not a multiple of the number of attention "
f"heads ({config.num_attention_heads})"
)
self.num_attention_heads = config.num_attention_heads
self.attention_head_size = int(config.hidden_size / config.num_attention_heads)
self.all_head_size = self.num_attention_heads * self.attention_head_size
self.query = nn.Linear(config.hidden_size, self.all_head_size)
self.key = nn.Linear(config.hidden_size, self.all_head_size)
self.value = nn.Linear(config.hidden_size, self.all_head_size)
self.dropout = nn.Dropout(config.attention_probs_dropout_prob)
self.position_embedding_type = position_embedding_type or getattr(
config, "position_embedding_type", "absolute"
)
if self.position_embedding_type == "relative_key" or self.position_embedding_type == "relative_key_query":
self.max_position_embeddings = config.max_position_embeddings
self.distance_embedding = nn.Embedding(2 * config.max_position_embeddings - 1, self.attention_head_size)
self.is_decoder = config.is_decoder
def transpose_for_scores(self, x: torch.Tensor) -> torch.Tensor:
new_x_shape = x.size()[:-1] + (self.num_attention_heads, self.attention_head_size)
x = x.view(new_x_shape)
return x.permute(0, 2, 1, 3)
def forward(
self,
hidden_states: torch.Tensor,
attention_mask: Optional[torch.FloatTensor] = None,
head_mask: Optional[torch.FloatTensor] = None,
encoder_hidden_states: Optional[torch.FloatTensor] = None,
encoder_attention_mask: Optional[torch.FloatTensor] = None,
past_key_value: Optional[Tuple[Tuple[torch.FloatTensor]]] = None,
output_attentions: Optional[bool] = False,
) -> Tuple[torch.Tensor]:
mixed_query_layer = self.query(hidden_states)
# If this is instantiated as a cross-attention module, the keys
# and values come from an encoder; the attention mask needs to be
# such that the encoder's padding tokens are not attended to.
is_cross_attention = encoder_hidden_states is not None
if is_cross_attention and past_key_value is not None:
# reuse k,v, cross_attentions
key_layer = past_key_value[0]
value_layer = past_key_value[1]
attention_mask = encoder_attention_mask
elif is_cross_attention:
key_layer = self.transpose_for_scores(self.key(encoder_hidden_states))
value_layer = self.transpose_for_scores(self.value(encoder_hidden_states))
attention_mask = encoder_attention_mask
elif past_key_value is not None:
key_layer = self.transpose_for_scores(self.key(hidden_states))
value_layer = self.transpose_for_scores(self.value(hidden_states))
key_layer = torch.cat([past_key_value[0], key_layer], dim=2)
value_layer = torch.cat([past_key_value[1], value_layer], dim=2)
else:
key_layer = self.transpose_for_scores(self.key(hidden_states))
value_layer = self.transpose_for_scores(self.value(hidden_states))
query_layer = self.transpose_for_scores(mixed_query_layer)
use_cache = past_key_value is not None
if self.is_decoder:
# if cross_attention save Tuple(torch.Tensor, torch.Tensor) of all cross attention key/value_states.
# Further calls to cross_attention layer can then reuse all cross-attention
# key/value_states (first "if" case)
# if uni-directional self-attention (decoder) save Tuple(torch.Tensor, torch.Tensor) of
# all previous decoder key/value_states. Further calls to uni-directional self-attention
# can concat previous decoder key/value_states to current projected key/value_states (third "elif" case)
# if encoder bi-directional self-attention `past_key_value` is always `None`
past_key_value = (key_layer, value_layer)
# Take the dot product between "query" and "key" to get the raw attention scores.
attention_scores = torch.matmul(query_layer, key_layer.transpose(-1, -2))
if self.position_embedding_type == "relative_key" or self.position_embedding_type == "relative_key_query":
query_length, key_length = query_layer.shape[2], key_layer.shape[2]
if use_cache:
position_ids_l = torch.tensor(key_length - 1, dtype=torch.long, device=hidden_states.device).view(
-1, 1
)
else:
position_ids_l = torch.arange(query_length, dtype=torch.long, device=hidden_states.device).view(-1, 1)
position_ids_r = torch.arange(key_length, dtype=torch.long, device=hidden_states.device).view(1, -1)
distance = position_ids_l - position_ids_r
positional_embedding = self.distance_embedding(distance + self.max_position_embeddings - 1)
positional_embedding = positional_embedding.to(dtype=query_layer.dtype) # fp16 compatibility
if self.position_embedding_type == "relative_key":
relative_position_scores = torch.einsum("bhld,lrd->bhlr", query_layer, positional_embedding)
attention_scores = attention_scores + relative_position_scores
elif self.position_embedding_type == "relative_key_query":
relative_position_scores_query = torch.einsum("bhld,lrd->bhlr", query_layer, positional_embedding)
relative_position_scores_key = torch.einsum("bhrd,lrd->bhlr", key_layer, positional_embedding)
attention_scores = attention_scores + relative_position_scores_query + relative_position_scores_key
attention_scores = attention_scores / math.sqrt(self.attention_head_size)
if attention_mask is not None:
# Apply the attention mask is (precomputed for all layers in AltRobertaModel forward() function)
attention_scores = attention_scores + attention_mask
# Normalize the attention scores to probabilities.
attention_probs = nn.functional.softmax(attention_scores, dim=-1)
# This is actually dropping out entire tokens to attend to, which might
# seem a bit unusual, but is taken from the original Transformer paper.
attention_probs = self.dropout(attention_probs)
# Mask heads if we want to
if head_mask is not None:
attention_probs = attention_probs * head_mask
context_layer = torch.matmul(attention_probs, value_layer)
context_layer = context_layer.permute(0, 2, 1, 3).contiguous()
new_context_layer_shape = context_layer.size()[:-2] + (self.all_head_size,)
context_layer = context_layer.view(new_context_layer_shape)
outputs = (context_layer, attention_probs) if output_attentions else (context_layer,)
if self.is_decoder:
outputs = outputs + (past_key_value,)
return outputs
# Copied from transformers.models.roberta.modeling_roberta.RobertaSelfOutput
class AltRobertaSelfOutput(nn.Module):
def __init__(self, config):
super().__init__()
self.dense = nn.Linear(config.hidden_size, config.hidden_size)
self.LayerNorm = nn.LayerNorm(config.hidden_size, eps=config.layer_norm_eps)
self.dropout = nn.Dropout(config.hidden_dropout_prob)
def forward(self, hidden_states: torch.Tensor, input_tensor: torch.Tensor) -> torch.Tensor:
hidden_states = self.dense(hidden_states)
hidden_states = self.dropout(hidden_states)
hidden_states = self.LayerNorm(hidden_states + input_tensor)
return hidden_states
# Copied from transformers.models.roberta.modeling_roberta.RobertaAttention with Roberta->AltRoberta
class AltRobertaAttention(nn.Module):
def __init__(self, config, position_embedding_type=None):
super().__init__()
self.self = AltRobertaSelfAttention(config, position_embedding_type=position_embedding_type)
self.output = AltRobertaSelfOutput(config)
self.pruned_heads = set()
def prune_heads(self, heads):
if len(heads) == 0:
return
heads, index = find_pruneable_heads_and_indices(
heads, self.self.num_attention_heads, self.self.attention_head_size, self.pruned_heads
)
# Prune linear layers
self.self.query = prune_linear_layer(self.self.query, index)
self.self.key = prune_linear_layer(self.self.key, index)
self.self.value = prune_linear_layer(self.self.value, index)
self.output.dense = prune_linear_layer(self.output.dense, index, dim=1)
# Update hyper params and store pruned heads
self.self.num_attention_heads = self.self.num_attention_heads - len(heads)
self.self.all_head_size = self.self.attention_head_size * self.self.num_attention_heads
self.pruned_heads = self.pruned_heads.union(heads)
def forward(
self,
hidden_states: torch.Tensor,
attention_mask: Optional[torch.FloatTensor] = None,
head_mask: Optional[torch.FloatTensor] = None,
encoder_hidden_states: Optional[torch.FloatTensor] = None,
encoder_attention_mask: Optional[torch.FloatTensor] = None,
past_key_value: Optional[Tuple[Tuple[torch.FloatTensor]]] = None,
output_attentions: Optional[bool] = False,
) -> Tuple[torch.Tensor]:
self_outputs = self.self(
hidden_states,
attention_mask,
head_mask,
encoder_hidden_states,
encoder_attention_mask,
past_key_value,
output_attentions,
)
attention_output = self.output(self_outputs[0], hidden_states)
outputs = (attention_output,) + self_outputs[1:] # add attentions if we output them
return outputs
# Copied from transformers.models.roberta.modeling_roberta.RobertaIntermediate with Roberta->AltRoberta
class AltRobertaIntermediate(nn.Module):
def __init__(self, config):
super().__init__()
self.dense = nn.Linear(config.hidden_size, config.intermediate_size)
if isinstance(config.hidden_act, str):
self.intermediate_act_fn = ACT2FN[config.hidden_act]
else:
self.intermediate_act_fn = config.hidden_act
def forward(self, hidden_states: torch.Tensor) -> torch.Tensor:
hidden_states = self.dense(hidden_states)
hidden_states = self.intermediate_act_fn(hidden_states)
return hidden_states
# Copied from transformers.models.roberta.modeling_roberta.RobertaOutput
class AltRobertaOutput(nn.Module):
def __init__(self, config):
super().__init__()
self.dense = nn.Linear(config.intermediate_size, config.hidden_size)
self.LayerNorm = nn.LayerNorm(config.hidden_size, eps=config.layer_norm_eps)
self.dropout = nn.Dropout(config.hidden_dropout_prob)
def forward(self, hidden_states: torch.Tensor, input_tensor: torch.Tensor) -> torch.Tensor:
hidden_states = self.dense(hidden_states)
hidden_states = self.dropout(hidden_states)
hidden_states = self.LayerNorm(hidden_states + input_tensor)
return hidden_states
# Copied from transformers.models.roberta.modeling_roberta.RobertaLayer with Roberta->AltRoberta
class AltRobertaLayer(nn.Module):
def __init__(self, config):
super().__init__()
self.chunk_size_feed_forward = config.chunk_size_feed_forward
self.seq_len_dim = 1
self.attention = AltRobertaAttention(config)
self.is_decoder = config.is_decoder
self.add_cross_attention = config.add_cross_attention
if self.add_cross_attention:
if not self.is_decoder:
raise ValueError(f"{self} should be used as a decoder model if cross attention is added")
self.crossattention = AltRobertaAttention(config, position_embedding_type="absolute")
self.intermediate = AltRobertaIntermediate(config)
self.output = AltRobertaOutput(config)
def forward(
self,
hidden_states: torch.Tensor,
attention_mask: Optional[torch.FloatTensor] = None,
head_mask: Optional[torch.FloatTensor] = None,
encoder_hidden_states: Optional[torch.FloatTensor] = None,
encoder_attention_mask: Optional[torch.FloatTensor] = None,
past_key_value: Optional[Tuple[Tuple[torch.FloatTensor]]] = None,
output_attentions: Optional[bool] = False,
) -> Tuple[torch.Tensor]:
# decoder uni-directional self-attention cached key/values tuple is at positions 1,2
self_attn_past_key_value = past_key_value[:2] if past_key_value is not None else None
self_attention_outputs = self.attention(
hidden_states,
attention_mask,
head_mask,
output_attentions=output_attentions,
past_key_value=self_attn_past_key_value,
)
attention_output = self_attention_outputs[0]
# if decoder, the last output is tuple of self-attn cache
if self.is_decoder:
outputs = self_attention_outputs[1:-1]
present_key_value = self_attention_outputs[-1]
else:
outputs = self_attention_outputs[1:] # add self attentions if we output attention weights
cross_attn_present_key_value = None
if self.is_decoder and encoder_hidden_states is not None:
if not hasattr(self, "crossattention"):
raise ValueError(
f"If `encoder_hidden_states` are passed, {self} has to be instantiated with cross-attention layers"
" by setting `config.add_cross_attention=True`"
)
# cross_attn cached key/values tuple is at positions 3,4 of past_key_value tuple
cross_attn_past_key_value = past_key_value[-2:] if past_key_value is not None else None
cross_attention_outputs = self.crossattention(
attention_output,
attention_mask,
head_mask,
encoder_hidden_states,
encoder_attention_mask,
cross_attn_past_key_value,
output_attentions,
)
attention_output = cross_attention_outputs[0]
outputs = outputs + cross_attention_outputs[1:-1] # add cross attentions if we output attention weights
# add cross-attn cache to positions 3,4 of present_key_value tuple
cross_attn_present_key_value = cross_attention_outputs[-1]
present_key_value = present_key_value + cross_attn_present_key_value
layer_output = apply_chunking_to_forward(
self.feed_forward_chunk, self.chunk_size_feed_forward, self.seq_len_dim, attention_output
)
outputs = (layer_output,) + outputs
# if decoder, return the attn key/values as the last output
if self.is_decoder:
outputs = outputs + (present_key_value,)
return outputs
def feed_forward_chunk(self, attention_output):
intermediate_output = self.intermediate(attention_output)
layer_output = self.output(intermediate_output, attention_output)
return layer_output
# Copied from transformers.models.roberta.modeling_roberta.RobertaEncoder with Roberta->AltRoberta
class AltRobertaEncoder(nn.Module):
def __init__(self, config):
super().__init__()
self.config = config
self.layer = nn.ModuleList([AltRobertaLayer(config) for _ in range(config.num_hidden_layers)])
self.gradient_checkpointing = False
def forward(
self,
hidden_states: torch.Tensor,
attention_mask: Optional[torch.FloatTensor] = None,
head_mask: Optional[torch.FloatTensor] = None,
encoder_hidden_states: Optional[torch.FloatTensor] = None,
encoder_attention_mask: Optional[torch.FloatTensor] = None,
past_key_values: Optional[Tuple[Tuple[torch.FloatTensor]]] = None,
use_cache: Optional[bool] = None,
output_attentions: Optional[bool] = False,
output_hidden_states: Optional[bool] = False,
return_dict: Optional[bool] = True,
) -> Union[Tuple[torch.Tensor], BaseModelOutputWithPastAndCrossAttentions]:
all_hidden_states = () if output_hidden_states else None
all_self_attentions = () if output_attentions else None
all_cross_attentions = () if output_attentions and self.config.add_cross_attention else None
if self.gradient_checkpointing and self.training:
if use_cache:
logger.warning_once(
"`use_cache=True` is incompatible with gradient checkpointing. Setting `use_cache=False`..."
)
use_cache = False
next_decoder_cache = () if use_cache else None
for i, layer_module in enumerate(self.layer):
if output_hidden_states:
all_hidden_states = all_hidden_states + (hidden_states,)
layer_head_mask = head_mask[i] if head_mask is not None else None
past_key_value = past_key_values[i] if past_key_values is not None else None
if self.gradient_checkpointing and self.training:
def create_custom_forward(module):
def custom_forward(*inputs):
return module(*inputs, past_key_value, output_attentions)
return custom_forward
layer_outputs = torch.utils.checkpoint.checkpoint(
create_custom_forward(layer_module),
hidden_states,
attention_mask,
layer_head_mask,
encoder_hidden_states,
encoder_attention_mask,
)
else:
layer_outputs = layer_module(
hidden_states,
attention_mask,
layer_head_mask,
encoder_hidden_states,
encoder_attention_mask,
past_key_value,
output_attentions,
)
hidden_states = layer_outputs[0]
if use_cache:
next_decoder_cache += (layer_outputs[-1],)
if output_attentions:
all_self_attentions = all_self_attentions + (layer_outputs[1],)
if self.config.add_cross_attention:
all_cross_attentions = all_cross_attentions + (layer_outputs[2],)
if output_hidden_states:
all_hidden_states = all_hidden_states + (hidden_states,)
if not return_dict:
return tuple(
v
for v in [
hidden_states,
next_decoder_cache,
all_hidden_states,
all_self_attentions,
all_cross_attentions,
]
if v is not None
)
return BaseModelOutputWithPastAndCrossAttentions(
last_hidden_state=hidden_states,
past_key_values=next_decoder_cache,
hidden_states=all_hidden_states,
attentions=all_self_attentions,
cross_attentions=all_cross_attentions,
)
# Copied from transformers.models.roberta.modeling_roberta.RobertaPooler
class AltRobertaPooler(nn.Module):
def __init__(self, config):
super().__init__()
self.dense = nn.Linear(config.hidden_size, config.hidden_size)
self.activation = nn.Tanh()
def forward(self, hidden_states: torch.Tensor) -> torch.Tensor:
# We "pool" the model by simply taking the hidden state corresponding
# to the first token.
first_token_tensor = hidden_states[:, 0]
pooled_output = self.dense(first_token_tensor)
pooled_output = self.activation(pooled_output)
return pooled_output
# Copied from transformers.models.clip.modeling_clip.CLIPAttention with CLIP->AltCLIP
class AltCLIPAttention(nn.Module):
"""Multi-headed attention from 'Attention Is All You Need' paper"""
def __init__(self, config):
super().__init__()
self.config = config
self.embed_dim = config.hidden_size
self.num_heads = config.num_attention_heads
self.head_dim = self.embed_dim // self.num_heads
if self.head_dim * self.num_heads != self.embed_dim:
raise ValueError(
f"embed_dim must be divisible by num_heads (got `embed_dim`: {self.embed_dim} and `num_heads`:"
f" {self.num_heads})."
)
self.scale = self.head_dim**-0.5
self.dropout = config.attention_dropout
self.k_proj = nn.Linear(self.embed_dim, self.embed_dim)
self.v_proj = nn.Linear(self.embed_dim, self.embed_dim)
self.q_proj = nn.Linear(self.embed_dim, self.embed_dim)
self.out_proj = nn.Linear(self.embed_dim, self.embed_dim)
def _shape(self, tensor: torch.Tensor, seq_len: int, bsz: int):
return tensor.view(bsz, seq_len, self.num_heads, self.head_dim).transpose(1, 2).contiguous()
def forward(
self,
hidden_states: torch.Tensor,
attention_mask: Optional[torch.Tensor] = None,
causal_attention_mask: Optional[torch.Tensor] = None,
output_attentions: Optional[bool] = False,
) -> Tuple[torch.Tensor, Optional[torch.Tensor], Optional[Tuple[torch.Tensor]]]:
"""Input shape: Batch x Time x Channel"""
bsz, tgt_len, embed_dim = hidden_states.size()
# get query proj
query_states = self.q_proj(hidden_states) * self.scale
key_states = self._shape(self.k_proj(hidden_states), -1, bsz)
value_states = self._shape(self.v_proj(hidden_states), -1, bsz)
proj_shape = (bsz * self.num_heads, -1, self.head_dim)
query_states = self._shape(query_states, tgt_len, bsz).view(*proj_shape)
key_states = key_states.view(*proj_shape)
value_states = value_states.view(*proj_shape)
src_len = key_states.size(1)
attn_weights = torch.bmm(query_states, key_states.transpose(1, 2))
if attn_weights.size() != (bsz * self.num_heads, tgt_len, src_len):
raise ValueError(
f"Attention weights should be of size {(bsz * self.num_heads, tgt_len, src_len)}, but is"
f" {attn_weights.size()}"
)
# apply the causal_attention_mask first
if causal_attention_mask is not None:
if causal_attention_mask.size() != (bsz, 1, tgt_len, src_len):
raise ValueError(
f"Attention mask should be of size {(bsz, 1, tgt_len, src_len)}, but is"
f" {causal_attention_mask.size()}"
)
attn_weights = attn_weights.view(bsz, self.num_heads, tgt_len, src_len) + causal_attention_mask
attn_weights = attn_weights.view(bsz * self.num_heads, tgt_len, src_len)
if attention_mask is not None:
if attention_mask.size() != (bsz, 1, tgt_len, src_len):
raise ValueError(
f"Attention mask should be of size {(bsz, 1, tgt_len, src_len)}, but is {attention_mask.size()}"
)
attn_weights = attn_weights.view(bsz, self.num_heads, tgt_len, src_len) + attention_mask
attn_weights = attn_weights.view(bsz * self.num_heads, tgt_len, src_len)
attn_weights = nn.functional.softmax(attn_weights, dim=-1)
if output_attentions:
# this operation is a bit akward, but it's required to
# make sure that attn_weights keeps its gradient.
# In order to do so, attn_weights have to reshaped
# twice and have to be reused in the following
attn_weights_reshaped = attn_weights.view(bsz, self.num_heads, tgt_len, src_len)
attn_weights = attn_weights_reshaped.view(bsz * self.num_heads, tgt_len, src_len)
else:
attn_weights_reshaped = None
attn_probs = nn.functional.dropout(attn_weights, p=self.dropout, training=self.training)
attn_output = torch.bmm(attn_probs, value_states)
if attn_output.size() != (bsz * self.num_heads, tgt_len, self.head_dim):
raise ValueError(
f"`attn_output` should be of size {(bsz, self.num_heads, tgt_len, self.head_dim)}, but is"
f" {attn_output.size()}"
)
attn_output = attn_output.view(bsz, self.num_heads, tgt_len, self.head_dim)
attn_output = attn_output.transpose(1, 2)
attn_output = attn_output.reshape(bsz, tgt_len, embed_dim)
attn_output = self.out_proj(attn_output)
return attn_output, attn_weights_reshaped
# Copied from transformers.models.clip.modeling_clip.CLIPMLP with CLIP->AltCLIP
class AltCLIPMLP(nn.Module):
def __init__(self, config):
super().__init__()
self.config = config
self.activation_fn = ACT2FN[config.hidden_act]
self.fc1 = nn.Linear(config.hidden_size, config.intermediate_size)
self.fc2 = nn.Linear(config.intermediate_size, config.hidden_size)
def forward(self, hidden_states: torch.Tensor) -> torch.Tensor:
hidden_states = self.fc1(hidden_states)
hidden_states = self.activation_fn(hidden_states)
hidden_states = self.fc2(hidden_states)
return hidden_states
# Copied from transformers.models.clip.modeling_clip.CLIPEncoderLayer with CLIP->AltCLIP
class AltCLIPEncoderLayer(nn.Module):
def __init__(self, config: AltCLIPConfig):
super().__init__()
self.embed_dim = config.hidden_size
self.self_attn = AltCLIPAttention(config)
self.layer_norm1 = nn.LayerNorm(self.embed_dim, eps=config.layer_norm_eps)
self.mlp = AltCLIPMLP(config)
self.layer_norm2 = nn.LayerNorm(self.embed_dim, eps=config.layer_norm_eps)
def forward(
self,
hidden_states: torch.Tensor,
attention_mask: torch.Tensor,
causal_attention_mask: torch.Tensor,
output_attentions: Optional[bool] = False,
) -> Tuple[torch.FloatTensor]:
"""
Args:
hidden_states (`torch.FloatTensor`): input to the layer of shape `(batch, seq_len, embed_dim)`
attention_mask (`torch.FloatTensor`): attention mask of size
`(batch, 1, tgt_len, src_len)` where padding elements are indicated by very large negative values.
`(config.encoder_attention_heads,)`.
output_attentions (`bool`, *optional*):
Whether or not to return the attentions tensors of all attention layers. See `attentions` under
returned tensors for more detail.
"""
residual = hidden_states
hidden_states = self.layer_norm1(hidden_states)
hidden_states, attn_weights = self.self_attn(
hidden_states=hidden_states,
attention_mask=attention_mask,
causal_attention_mask=causal_attention_mask,
output_attentions=output_attentions,
)
hidden_states = residual + hidden_states
residual = hidden_states
hidden_states = self.layer_norm2(hidden_states)
hidden_states = self.mlp(hidden_states)
hidden_states = residual + hidden_states
outputs = (hidden_states,)
if output_attentions:
outputs += (attn_weights,)
return outputs
# Copied from transformers.models.clip.modeling_clip.CLIPEncoder with CLIP->AltCLIP
class AltCLIPEncoder(nn.Module):
"""
Transformer encoder consisting of `config.num_hidden_layers` self attention layers. Each layer is a
[`AltCLIPEncoderLayer`].
Args:
config: AltCLIPConfig
"""
def __init__(self, config: AltCLIPConfig):
super().__init__()
self.config = config
self.layers = nn.ModuleList([AltCLIPEncoderLayer(config) for _ in range(config.num_hidden_layers)])
self.gradient_checkpointing = False
def forward(
self,
inputs_embeds,
attention_mask: Optional[torch.Tensor] = None,
causal_attention_mask: Optional[torch.Tensor] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[Tuple, BaseModelOutput]:
r"""
Args:
inputs_embeds (`torch.FloatTensor` of shape `(batch_size, sequence_length, hidden_size)`):
Optionally, instead of passing `input_ids` you can choose to directly pass an embedded representation.
This is useful if you want more control over how to convert `input_ids` indices into associated vectors
than the model's internal embedding lookup matrix.
attention_mask (`torch.Tensor` of shape `(batch_size, sequence_length)`, *optional*):
Mask to avoid performing attention on padding token indices. Mask values selected in `[0, 1]`:
- 1 for tokens that are **not masked**,
- 0 for tokens that are **masked**.
[What are attention masks?](../glossary#attention-mask)
causal_attention_mask (`torch.Tensor` of shape `(batch_size, sequence_length)`, *optional*):
Causal mask for the text model. Mask values selected in `[0, 1]`:
- 1 for tokens that are **not masked**,
- 0 for tokens that are **masked**.
[What are attention masks?](../glossary#attention-mask)
output_attentions (`bool`, *optional*):
Whether or not to return the attentions tensors of all attention layers. See `attentions` under
returned tensors for more detail.
output_hidden_states (`bool`, *optional*):
Whether or not to return the hidden states of all layers. See `hidden_states` under returned tensors
for more detail.
return_dict (`bool`, *optional*):
Whether or not to return a [`~utils.ModelOutput`] instead of a plain tuple.
"""
output_attentions = output_attentions if output_attentions is not None else self.config.output_attentions
output_hidden_states = (
output_hidden_states if output_hidden_states is not None else self.config.output_hidden_states
)
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
encoder_states = () if output_hidden_states else None
all_attentions = () if output_attentions else None
hidden_states = inputs_embeds
for idx, encoder_layer in enumerate(self.layers):
if output_hidden_states:
encoder_states = encoder_states + (hidden_states,)
if self.gradient_checkpointing and self.training:
def create_custom_forward(module):
def custom_forward(*inputs):
return module(*inputs, output_attentions)
return custom_forward
layer_outputs = torch.utils.checkpoint.checkpoint(
create_custom_forward(encoder_layer),
hidden_states,
attention_mask,
causal_attention_mask,
)
else:
layer_outputs = encoder_layer(
hidden_states,
attention_mask,
causal_attention_mask,
output_attentions=output_attentions,
)
hidden_states = layer_outputs[0]
if output_attentions:
all_attentions = all_attentions + (layer_outputs[1],)
if output_hidden_states:
encoder_states = encoder_states + (hidden_states,)
if not return_dict:
return tuple(v for v in [hidden_states, encoder_states, all_attentions] if v is not None)
return BaseModelOutput(
last_hidden_state=hidden_states, hidden_states=encoder_states, attentions=all_attentions
)
# Copied from transformers.models.clip.modeling_clip.CLIPVisionEmbeddings with CLIP->AltCLIP
class AltCLIPVisionEmbeddings(nn.Module):
def __init__(self, config: AltCLIPVisionConfig):
super().__init__()
self.config = config
self.embed_dim = config.hidden_size
self.image_size = config.image_size
self.patch_size = config.patch_size
self.class_embedding = nn.Parameter(torch.randn(self.embed_dim))
self.patch_embedding = nn.Conv2d(
in_channels=config.num_channels,
out_channels=self.embed_dim,
kernel_size=self.patch_size,
stride=self.patch_size,
bias=False,
)
self.num_patches = (self.image_size // self.patch_size) ** 2
self.num_positions = self.num_patches + 1
self.position_embedding = nn.Embedding(self.num_positions, self.embed_dim)
self.register_buffer("position_ids", torch.arange(self.num_positions).expand((1, -1)), persistent=False)
def forward(self, pixel_values: torch.FloatTensor) -> torch.Tensor:
batch_size = pixel_values.shape[0]
patch_embeds = self.patch_embedding(pixel_values) # shape = [*, width, grid, grid]
patch_embeds = patch_embeds.flatten(2).transpose(1, 2)
class_embeds = self.class_embedding.expand(batch_size, 1, -1)
embeddings = torch.cat([class_embeds, patch_embeds], dim=1)
embeddings = embeddings + self.position_embedding(self.position_ids)
return embeddings
class AltCLIPPreTrainedModel(PreTrainedModel):
"""
An abstract class to handle weights initialization and a simple interface for downloading and loading pretrained
models.
"""
config_class = AltCLIPConfig
base_model_prefix = "altclip"
supports_gradient_checkpointing = True
def _init_weights(self, module):
"""Initialize the weights"""
factor = self.config.initializer_factor
if isinstance(module, AltCLIPVisionEmbeddings):
factor = self.config.initializer_factor
nn.init.normal_(module.class_embedding, mean=0.0, std=module.embed_dim**-0.5 * factor)
nn.init.normal_(module.patch_embedding.weight, std=module.config.initializer_range * factor)
nn.init.normal_(module.position_embedding.weight, std=module.config.initializer_range * factor)
elif isinstance(module, AltCLIPAttention):
factor = self.config.initializer_factor
in_proj_std = (module.embed_dim**-0.5) * ((2 * module.config.num_hidden_layers) ** -0.5) * factor
out_proj_std = (module.embed_dim**-0.5) * factor
nn.init.normal_(module.q_proj.weight, std=in_proj_std)
nn.init.normal_(module.k_proj.weight, std=in_proj_std)
nn.init.normal_(module.v_proj.weight, std=in_proj_std)
nn.init.normal_(module.out_proj.weight, std=out_proj_std)
elif isinstance(module, AltCLIPMLP):
factor = self.config.initializer_factor
in_proj_std = (
(module.config.hidden_size**-0.5) * ((2 * module.config.num_hidden_layers) ** -0.5) * factor
)
fc_std = (2 * module.config.hidden_size) ** -0.5 * factor
nn.init.normal_(module.fc1.weight, std=fc_std)
nn.init.normal_(module.fc2.weight, std=in_proj_std)
elif isinstance(module, AltCLIPModel):
nn.init.normal_(
module.text_projection.weight,
std=module.text_embed_dim**-0.5 * self.config.initializer_factor,
)
module.text_projection._is_hf_initialized = True
nn.init.normal_(
module.visual_projection.weight,
std=module.vision_embed_dim**-0.5 * self.config.initializer_factor,
)
module.visual_projection._is_hf_initialized = True
elif isinstance(module, nn.LayerNorm):
module.bias.data.zero_()
module.weight.data.fill_(1.0)
elif isinstance(module, nn.Linear):
module.weight.data.normal_(mean=0.0, std=self.config.initializer_factor)
if module.bias is not None:
module.bias.data.zero_()
elif isinstance(module, nn.Embedding):
module.weight.data.normal_(mean=0.0, std=self.config.initializer_factor)
if module.padding_idx is not None:
module.weight.data[module.padding_idx].zero_()
def _set_gradient_checkpointing(self, module, value=False):
if isinstance(module, AltCLIPEncoder):
module.gradient_checkpointing = value
if isinstance(module, AltRobertaEncoder):
module.gradient_checkpointing = value
# Copied from transformers.models.clip.modeling_clip.CLIPVisionTransformer with CLIPVisionTransformer->AltCLIPVisionTransformer,CLIPVisionConfig->AltCLIPVisionConfig,CLIPVisionEmbeddings->AltCLIPVisionEmbeddings,CLIPEncoder->AltCLIPEncoder,CLIP_VISION_INPUTS_DOCSTRING->ALTCLIP_VISION_INPUTS_DOCSTRING
class AltCLIPVisionTransformer(nn.Module):
def __init__(self, config: AltCLIPVisionConfig):
super().__init__()
self.config = config
embed_dim = config.hidden_size
self.embeddings = AltCLIPVisionEmbeddings(config)
self.pre_layrnorm = nn.LayerNorm(embed_dim, eps=config.layer_norm_eps)
self.encoder = AltCLIPEncoder(config)
self.post_layernorm = nn.LayerNorm(embed_dim, eps=config.layer_norm_eps)
@add_start_docstrings_to_model_forward(ALTCLIP_VISION_INPUTS_DOCSTRING)
@replace_return_docstrings(output_type=BaseModelOutputWithPooling, config_class=AltCLIPVisionConfig)
def forward(
self,
pixel_values: Optional[torch.FloatTensor] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[Tuple, BaseModelOutputWithPooling]:
r"""
Returns:
"""
output_attentions = output_attentions if output_attentions is not None else self.config.output_attentions
output_hidden_states = (
output_hidden_states if output_hidden_states is not None else self.config.output_hidden_states
)
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
if pixel_values is None:
raise ValueError("You have to specify pixel_values")
hidden_states = self.embeddings(pixel_values)
hidden_states = self.pre_layrnorm(hidden_states)
encoder_outputs = self.encoder(
inputs_embeds=hidden_states,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
last_hidden_state = encoder_outputs[0]
pooled_output = last_hidden_state[:, 0, :]
pooled_output = self.post_layernorm(pooled_output)
if not return_dict:
return (last_hidden_state, pooled_output) + encoder_outputs[1:]
return BaseModelOutputWithPooling(
last_hidden_state=last_hidden_state,
pooler_output=pooled_output,
hidden_states=encoder_outputs.hidden_states,
attentions=encoder_outputs.attentions,
)
class AltCLIPVisionModel(AltCLIPPreTrainedModel):
config_class = AltCLIPVisionConfig
main_input_name = "pixel_values"
def __init__(self, config: AltCLIPVisionConfig):
super().__init__(config)
self.vision_model = AltCLIPVisionTransformer(config)
# Initialize weights and apply final processing
self.post_init()
def get_input_embeddings(self) -> nn.Module:
return self.vision_model.embeddings.patch_embedding
@add_start_docstrings_to_model_forward(ALTCLIP_VISION_INPUTS_DOCSTRING)
@replace_return_docstrings(output_type=BaseModelOutputWithPooling, config_class=AltCLIPVisionConfig)
def forward(
self,
pixel_values: Optional[torch.FloatTensor] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[Tuple, BaseModelOutputWithPooling]:
r"""
Returns:
Examples:
```python
>>> from PIL import Image
>>> import requests
>>> from transformers import AutoProcessor, AltCLIPVisionModel
>>> model = AltCLIPVisionModel.from_pretrained("BAAI/AltCLIP")
>>> processor = AutoProcessor.from_pretrained("BAAI/AltCLIP")
>>> url = "http://images.cocodataset.org/val2017/000000039769.jpg"
>>> image = Image.open(requests.get(url, stream=True).raw)
>>> inputs = processor(images=image, return_tensors="pt")
>>> outputs = model(**inputs)
>>> last_hidden_state = outputs.last_hidden_state
>>> pooled_output = outputs.pooler_output # pooled CLS states
```"""
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
return self.vision_model(
pixel_values=pixel_values,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
class AltRobertaModel(AltCLIPPreTrainedModel):
"""
The model can behave as an encoder (with only self-attention) as well as a decoder, in which case a layer of
cross-attention is added between the self-attention layers, following the architecture described in *Attention is
all you need*_ by Ashish Vaswani, Noam Shazeer, Niki Parmar, Jakob Uszkoreit, Llion Jones, Aidan N. Gomez, Lukasz
Kaiser and Illia Polosukhin.
To behave as an decoder the model needs to be initialized with the `is_decoder` argument of the configuration set
to `True`. To be used in a Seq2Seq model, the model needs to initialized with both `is_decoder` argument and
`add_cross_attention` set to `True`; an `encoder_hidden_states` is then expected as an input to the forward pass.
.. _*Attention is all you need*: https://arxiv.org/abs/1706.03762
"""
config_class = AltCLIPTextConfig
# Copied from transformers.models.bert.modeling_bert.BertModel.__init__ with Bert->AltRoberta
def __init__(self, config, add_pooling_layer=True):
super().__init__(config)
self.config = config
self.embeddings = AltRobertaEmbeddings(config)
self.encoder = AltRobertaEncoder(config)
self.pooler = AltRobertaPooler(config) if add_pooling_layer else None
# Initialize weights and apply final processing
self.post_init()
def get_input_embeddings(self):
return self.embeddings.word_embeddings
def set_input_embeddings(self, value):
self.embeddings.word_embeddings = value
def _prune_heads(self, heads_to_prune):
"""
Prunes heads of the model. heads_to_prune: dict of {layer_num: list of heads to prune in this layer} See base
class PreTrainedModel
"""
for layer, heads in heads_to_prune.items():
self.encoder.layer[layer].attention.prune_heads(heads)
# Copied from transformers.models.bert.modeling_bert.BertModel.forward
def forward(
self,
input_ids: Optional[torch.Tensor] = None,
attention_mask: Optional[torch.Tensor] = None,
token_type_ids: Optional[torch.Tensor] = None,
position_ids: Optional[torch.Tensor] = None,
head_mask: Optional[torch.Tensor] = None,
inputs_embeds: Optional[torch.Tensor] = None,
encoder_hidden_states: Optional[torch.Tensor] = None,
encoder_attention_mask: Optional[torch.Tensor] = None,
past_key_values: Optional[List[torch.FloatTensor]] = None,
use_cache: Optional[bool] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[Tuple[torch.Tensor], BaseModelOutputWithPoolingAndCrossAttentions]:
r"""
encoder_hidden_states (`torch.FloatTensor` of shape `(batch_size, sequence_length, hidden_size)`, *optional*):
Sequence of hidden-states at the output of the last layer of the encoder. Used in the cross-attention if
the model is configured as a decoder.
encoder_attention_mask (`torch.FloatTensor` of shape `(batch_size, sequence_length)`, *optional*):
Mask to avoid performing attention on the padding token indices of the encoder input. This mask is used in
the cross-attention if the model is configured as a decoder. Mask values selected in `[0, 1]`:
- 1 for tokens that are **not masked**,
- 0 for tokens that are **masked**.
past_key_values (`tuple(tuple(torch.FloatTensor))` of length `config.n_layers` with each tuple having 4 tensors of shape `(batch_size, num_heads, sequence_length - 1, embed_size_per_head)`):
Contains precomputed key and value hidden states of the attention blocks. Can be used to speed up decoding.
If `past_key_values` are used, the user can optionally input only the last `decoder_input_ids` (those that
don't have their past key value states given to this model) of shape `(batch_size, 1)` instead of all
`decoder_input_ids` of shape `(batch_size, sequence_length)`.
use_cache (`bool`, *optional*):
If set to `True`, `past_key_values` key value states are returned and can be used to speed up decoding (see
`past_key_values`).
"""
output_attentions = output_attentions if output_attentions is not None else self.config.output_attentions
output_hidden_states = (
output_hidden_states if output_hidden_states is not None else self.config.output_hidden_states
)
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
if self.config.is_decoder:
use_cache = use_cache if use_cache is not None else self.config.use_cache
else:
use_cache = False
if input_ids is not None and inputs_embeds is not None:
raise ValueError("You cannot specify both input_ids and inputs_embeds at the same time")
elif input_ids is not None:
input_shape = input_ids.size()
self.warn_if_padding_and_no_attention_mask(input_ids, attention_mask)
elif inputs_embeds is not None:
input_shape = inputs_embeds.size()[:-1]
else:
raise ValueError("You have to specify either input_ids or inputs_embeds")
batch_size, seq_length = input_shape
device = input_ids.device if input_ids is not None else inputs_embeds.device
# past_key_values_length
past_key_values_length = past_key_values[0][0].shape[2] if past_key_values is not None else 0
if attention_mask is None:
attention_mask = torch.ones(((batch_size, seq_length + past_key_values_length)), device=device)
if token_type_ids is None:
if hasattr(self.embeddings, "token_type_ids"):
buffered_token_type_ids = self.embeddings.token_type_ids[:, :seq_length]
buffered_token_type_ids_expanded = buffered_token_type_ids.expand(batch_size, seq_length)
token_type_ids = buffered_token_type_ids_expanded
else:
token_type_ids = torch.zeros(input_shape, dtype=torch.long, device=device)
# We can provide a self-attention mask of dimensions [batch_size, from_seq_length, to_seq_length]
# ourselves in which case we just need to make it broadcastable to all heads.
extended_attention_mask: torch.Tensor = self.get_extended_attention_mask(attention_mask, input_shape)
# If a 2D or 3D attention mask is provided for the cross-attention
# we need to make broadcastable to [batch_size, num_heads, seq_length, seq_length]
if self.config.is_decoder and encoder_hidden_states is not None:
encoder_batch_size, encoder_sequence_length, _ = encoder_hidden_states.size()
encoder_hidden_shape = (encoder_batch_size, encoder_sequence_length)
if encoder_attention_mask is None:
encoder_attention_mask = torch.ones(encoder_hidden_shape, device=device)
encoder_extended_attention_mask = self.invert_attention_mask(encoder_attention_mask)
else:
encoder_extended_attention_mask = None
# Prepare head mask if needed
# 1.0 in head_mask indicate we keep the head
# attention_probs has shape bsz x n_heads x N x N
# input head_mask has shape [num_heads] or [num_hidden_layers x num_heads]
# and head_mask is converted to shape [num_hidden_layers x batch x num_heads x seq_length x seq_length]
head_mask = self.get_head_mask(head_mask, self.config.num_hidden_layers)
embedding_output = self.embeddings(
input_ids=input_ids,
position_ids=position_ids,
token_type_ids=token_type_ids,
inputs_embeds=inputs_embeds,
past_key_values_length=past_key_values_length,
)
encoder_outputs = self.encoder(
embedding_output,
attention_mask=extended_attention_mask,
head_mask=head_mask,
encoder_hidden_states=encoder_hidden_states,
encoder_attention_mask=encoder_extended_attention_mask,
past_key_values=past_key_values,
use_cache=use_cache,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
sequence_output = encoder_outputs[0]
pooled_output = self.pooler(sequence_output) if self.pooler is not None else None
if not return_dict:
return (sequence_output, pooled_output) + encoder_outputs[1:]
return BaseModelOutputWithPoolingAndCrossAttentions(
last_hidden_state=sequence_output,
pooler_output=pooled_output,
past_key_values=encoder_outputs.past_key_values,
hidden_states=encoder_outputs.hidden_states,
attentions=encoder_outputs.attentions,
cross_attentions=encoder_outputs.cross_attentions,
)
class AltCLIPTextModel(AltCLIPPreTrainedModel):
config_class = AltCLIPTextConfig
def __init__(self, config):
super().__init__(config)
self.roberta = AltRobertaModel(config, add_pooling_layer=False)
self.transformation = nn.Linear(config.hidden_size, config.project_dim)
self.pre_LN = nn.LayerNorm(config.hidden_size, eps=config.layer_norm_eps)
self.post_init()
def get_input_embeddings(self) -> nn.Module:
return self.roberta.embeddings.word_embeddings
def set_input_embeddings(self, value: nn.Embedding) -> None:
self.roberta.embeddings.word_embeddings = value
def resize_token_embeddings(self, new_num_tokens: Optional[int] = None) -> nn.Embedding:
return super().resize_token_embeddings(new_num_tokens)
@add_start_docstrings_to_model_forward(ALTCLIP_TEXT_INPUTS_DOCSTRING)
@replace_return_docstrings(output_type=BaseModelOutputWithPoolingAndProjection, config_class=AltCLIPTextConfig)
def forward(
self,
input_ids: Optional[torch.Tensor] = None,
attention_mask: Optional[torch.Tensor] = None,
token_type_ids: Optional[torch.Tensor] = None,
position_ids: Optional[torch.Tensor] = None,
head_mask: Optional[torch.Tensor] = None,
inputs_embeds: Optional[torch.Tensor] = None,
encoder_hidden_states: Optional[torch.Tensor] = None,
encoder_attention_mask: Optional[torch.Tensor] = None,
output_attentions: Optional[bool] = None,
return_dict: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
):
r"""
Returns:
Examples:
```python
>>> from transformers import AutoProcessor, AltCLIPTextModel
>>> model = AltCLIPTextModel.from_pretrained("BAAI/AltCLIP")
>>> processor = AutoProcessor.from_pretrained("BAAI/AltCLIP")
>>> texts = ["it's a cat", "it's a dog"]
>>> inputs = processor(text=texts, padding=True, return_tensors="pt")
>>> outputs = model(**inputs)
>>> last_hidden_state = outputs.last_hidden_state
>>> pooled_output = outputs.pooler_output # pooled CLS states
```"""
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
outputs = self.roberta(
input_ids=input_ids,
attention_mask=attention_mask,
token_type_ids=token_type_ids,
position_ids=position_ids,
head_mask=head_mask,
inputs_embeds=inputs_embeds,
encoder_hidden_states=encoder_hidden_states,
encoder_attention_mask=encoder_attention_mask,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
# last module outputs
sequence_output = outputs[0]
# project every module
sequence_output = self.pre_LN(sequence_output)
# pooler
projection_state = self.transformation(sequence_output)
pooler_output = projection_state[:, 0]
if not return_dict:
return (projection_state, pooler_output) + outputs[2:4]
return BaseModelOutputWithPoolingAndProjection(
last_hidden_state=projection_state,
pooler_output=pooler_output,
hidden_states=outputs.hidden_states,
attentions=outputs.attentions,
)
class AltCLIPModel(AltCLIPPreTrainedModel):
config_class = AltCLIPConfig
def __init__(self, config: AltCLIPConfig):
super().__init__(config)
if not isinstance(config.vision_config, AltCLIPVisionConfig):
raise ValueError(
"config.vision_config is expected to be of type AltCLIPVisionConfig but is of type"
f" {type(config.vision_config)}."
)
if not isinstance(config.text_config, AltCLIPTextConfig):
raise ValueError(
"config.text_config is expected to be of type AltCLIPTextConfig but is of type"
f" {type(config.text_config)}."
)
text_config = config.text_config
vision_config = config.vision_config
self.projection_dim = config.projection_dim
self.text_embed_dim = text_config.project_dim
self.vision_embed_dim = vision_config.hidden_size
self.text_model = AltCLIPTextModel(text_config)
self.vision_model = AltCLIPVisionTransformer(vision_config)
self.visual_projection = nn.Linear(self.vision_embed_dim, self.projection_dim, bias=False)
self.text_projection = nn.Linear(self.text_embed_dim, self.projection_dim, bias=False)
self.logit_scale = nn.Parameter(torch.tensor(self.config.logit_scale_init_value))
# Initialize weights and apply final processing
self.post_init()
@add_start_docstrings_to_model_forward(ALTCLIP_TEXT_INPUTS_DOCSTRING)
def get_text_features(
self,
input_ids: Optional[torch.Tensor] = None,
attention_mask: Optional[torch.Tensor] = None,
position_ids: Optional[torch.Tensor] = None,
token_type_ids=None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> torch.FloatTensor:
r"""
Returns:
text_features (`torch.FloatTensor` of shape `(batch_size, output_dim`): The text embeddings obtained by
applying the projection layer to the pooled output of [`AltCLIPTextModel`].
Examples:
```python
>>> from transformers import AutoProcessor, AltCLIPModel
>>> model = AltCLIPModel.from_pretrained("BAAI/AltCLIP")
>>> processor = AutoProcessor.from_pretrained("BAAI/AltCLIP")
>>> inputs = processor(text=["a photo of a cat", "a photo of a dog"], padding=True, return_tensors="pt")
>>> text_features = model.get_text_features(**inputs)
```"""
# Use AltCLIP model's config for some fields (if specified) instead of those of vision & text components.
output_attentions = output_attentions if output_attentions is not None else self.config.output_attentions
output_hidden_states = (
output_hidden_states if output_hidden_states is not None else self.config.output_hidden_states
)
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
text_outputs = self.text_model(
input_ids=input_ids,
attention_mask=attention_mask,
position_ids=position_ids,
token_type_ids=token_type_ids,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
pooled_output = text_outputs[1]
text_features = self.text_projection(pooled_output)
return text_features
@add_start_docstrings_to_model_forward(ALTCLIP_VISION_INPUTS_DOCSTRING)
def get_image_features(
self,
pixel_values: Optional[torch.FloatTensor] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> torch.FloatTensor:
r"""
Returns:
image_features (`torch.FloatTensor` of shape `(batch_size, output_dim`): The image embeddings obtained by
applying the projection layer to the pooled output of [`AltCLIPVisionModel`].
Examples:
```python
>>> from PIL import Image
>>> import requests
>>> from transformers import AutoProcessor, AltCLIPModel
>>> model = AltCLIPModel.from_pretrained("BAAI/AltCLIP")
>>> processor = AutoProcessor.from_pretrained("BAAI/AltCLIP")
>>> url = "http://images.cocodataset.org/val2017/000000039769.jpg"
>>> image = Image.open(requests.get(url, stream=True).raw)
>>> inputs = processor(images=image, return_tensors="pt")
>>> image_features = model.get_image_features(**inputs)
```"""
# Use AltCLIP model's config for some fields (if specified) instead of those of vision & text components.
output_attentions = output_attentions if output_attentions is not None else self.config.output_attentions
output_hidden_states = (
output_hidden_states if output_hidden_states is not None else self.config.output_hidden_states
)
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
vision_outputs = self.vision_model(
pixel_values=pixel_values,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
pooled_output = vision_outputs[1] # pooled_output
image_features = self.visual_projection(pooled_output)
return image_features
@add_start_docstrings_to_model_forward(ALTCLIP_INPUTS_DOCSTRING)
@replace_return_docstrings(output_type=AltCLIPOutput, config_class=AltCLIPConfig)
def forward(
self,
input_ids: Optional[torch.LongTensor] = None,
pixel_values: Optional[torch.FloatTensor] = None,
attention_mask: Optional[torch.Tensor] = None,
position_ids: Optional[torch.LongTensor] = None,
token_type_ids=None,
return_loss: Optional[bool] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[Tuple, AltCLIPOutput]:
r"""
Returns:
Examples:
```python
>>> from PIL import Image
>>> import requests
>>> from transformers import AutoProcessor, AltCLIPModel
>>> model = AltCLIPModel.from_pretrained("BAAI/AltCLIP")
>>> processor = AutoProcessor.from_pretrained("BAAI/AltCLIP")
>>> url = "http://images.cocodataset.org/val2017/000000039769.jpg"
>>> image = Image.open(requests.get(url, stream=True).raw)
>>> inputs = processor(
... text=["a photo of a cat", "a photo of a dog"], images=image, return_tensors="pt", padding=True
... )
>>> outputs = model(**inputs)
>>> logits_per_image = outputs.logits_per_image # this is the image-text similarity score
>>> probs = logits_per_image.softmax(dim=1) # we can take the softmax to get the label probabilities
```"""
# Use AltCLIP model's config for some fields (if specified) instead of those of vision & text components.
output_attentions = output_attentions if output_attentions is not None else self.config.output_attentions
output_hidden_states = (
output_hidden_states if output_hidden_states is not None else self.config.output_hidden_states
)
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
text_outputs = self.text_model(
input_ids=input_ids,
attention_mask=attention_mask,
token_type_ids=token_type_ids,
position_ids=position_ids,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
vision_outputs = self.vision_model(
pixel_values=pixel_values,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
image_embeds = vision_outputs[1]
image_embeds = self.visual_projection(image_embeds)
text_embeds = text_outputs[1]
text_embeds = self.text_projection(text_embeds)
# normalized features
image_embeds = image_embeds / image_embeds.norm(p=2, dim=-1, keepdim=True)
text_embeds = text_embeds / text_embeds.norm(p=2, dim=-1, keepdim=True)
# cosine similarity as logits
logit_scale = self.logit_scale.exp()
logits_per_text = torch.matmul(text_embeds, image_embeds.t()) * logit_scale
logits_per_image = logits_per_text.T
loss = None
if return_loss:
loss = clip_loss(logits_per_text)
if not return_dict:
output = (logits_per_image, logits_per_text, text_embeds, image_embeds, text_outputs, vision_outputs)
return ((loss,) + output) if loss is not None else output
return AltCLIPOutput(
loss=loss,
logits_per_image=logits_per_image,
logits_per_text=logits_per_text,
text_embeds=text_embeds,
image_embeds=image_embeds,
text_model_output=text_outputs,
vision_model_output=vision_outputs,
)
# Copied from transformers.models.roberta.modeling_roberta.create_position_ids_from_input_ids
def create_position_ids_from_input_ids(input_ids, padding_idx, past_key_values_length=0):
"""
Replace non-padding symbols with their position numbers. Position numbers begin at padding_idx+1. Padding symbols
are ignored. This is modified from fairseq's `utils.make_positions`.
Args:
x: torch.Tensor x:
Returns: torch.Tensor
"""
# The series of casts and type-conversions here are carefully balanced to both work with ONNX export and XLA.
mask = input_ids.ne(padding_idx).int()
incremental_indices = (torch.cumsum(mask, dim=1).type_as(mask) + past_key_values_length) * mask
return incremental_indices.long() + padding_idx
| 78,788 | 44.941108 | 301 | py |
transformers | transformers-main/src/transformers/models/mobilebert/modeling_tf_mobilebert.py | # coding=utf-8
# Copyright 2018 The Google AI Language Team Authors and The HuggingFace Inc. team.
# Copyright (c) 2018, NVIDIA CORPORATION. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
""" TF 2.0 MobileBERT model."""
from __future__ import annotations
import warnings
from dataclasses import dataclass
from typing import Optional, Tuple, Union
import numpy as np
import tensorflow as tf
from ...activations_tf import get_tf_activation
from ...modeling_tf_outputs import (
TFBaseModelOutput,
TFBaseModelOutputWithPooling,
TFMaskedLMOutput,
TFMultipleChoiceModelOutput,
TFNextSentencePredictorOutput,
TFQuestionAnsweringModelOutput,
TFSequenceClassifierOutput,
TFTokenClassifierOutput,
)
from ...modeling_tf_utils import (
TFMaskedLanguageModelingLoss,
TFModelInputType,
TFMultipleChoiceLoss,
TFNextSentencePredictionLoss,
TFPreTrainedModel,
TFQuestionAnsweringLoss,
TFSequenceClassificationLoss,
TFTokenClassificationLoss,
get_initializer,
keras_serializable,
unpack_inputs,
)
from ...tf_utils import check_embeddings_within_bounds, shape_list, stable_softmax
from ...utils import (
ModelOutput,
add_code_sample_docstrings,
add_start_docstrings,
add_start_docstrings_to_model_forward,
logging,
replace_return_docstrings,
)
from .configuration_mobilebert import MobileBertConfig
logger = logging.get_logger(__name__)
_CHECKPOINT_FOR_DOC = "google/mobilebert-uncased"
_CONFIG_FOR_DOC = "MobileBertConfig"
# TokenClassification docstring
_CHECKPOINT_FOR_TOKEN_CLASSIFICATION = "vumichien/mobilebert-finetuned-ner"
_TOKEN_CLASS_EXPECTED_OUTPUT = "['I-ORG', 'I-ORG', 'O', 'O', 'O', 'O', 'O', 'I-LOC', 'O', 'I-LOC', 'I-LOC']"
_TOKEN_CLASS_EXPECTED_LOSS = 0.03
# QuestionAnswering docstring
_CHECKPOINT_FOR_QA = "vumichien/mobilebert-uncased-squad-v2"
_QA_EXPECTED_OUTPUT = "'a nice puppet'"
_QA_EXPECTED_LOSS = 3.98
_QA_TARGET_START_INDEX = 12
_QA_TARGET_END_INDEX = 13
# SequenceClassification docstring
_CHECKPOINT_FOR_SEQUENCE_CLASSIFICATION = "vumichien/emo-mobilebert"
_SEQ_CLASS_EXPECTED_OUTPUT = "'others'"
_SEQ_CLASS_EXPECTED_LOSS = "4.72"
TF_MOBILEBERT_PRETRAINED_MODEL_ARCHIVE_LIST = [
"google/mobilebert-uncased",
# See all MobileBERT models at https://huggingface.co/models?filter=mobilebert
]
# Copied from transformers.models.bert.modeling_tf_bert.TFBertPreTrainingLoss
class TFMobileBertPreTrainingLoss:
"""
Loss function suitable for BERT-like pretraining, that is, the task of pretraining a language model by combining
NSP + MLM. .. note:: Any label of -100 will be ignored (along with the corresponding logits) in the loss
computation.
"""
def hf_compute_loss(self, labels: tf.Tensor, logits: tf.Tensor) -> tf.Tensor:
loss_fn = tf.keras.losses.SparseCategoricalCrossentropy(
from_logits=True, reduction=tf.keras.losses.Reduction.NONE
)
# Clip negative labels to zero here to avoid NaNs and errors - those positions will get masked later anyway
unmasked_lm_losses = loss_fn(y_true=tf.nn.relu(labels["labels"]), y_pred=logits[0])
# make sure only labels that are not equal to -100
# are taken into account for the loss computation
lm_loss_mask = tf.cast(labels["labels"] != -100, dtype=unmasked_lm_losses.dtype)
masked_lm_losses = unmasked_lm_losses * lm_loss_mask
reduced_masked_lm_loss = tf.reduce_sum(masked_lm_losses) / tf.reduce_sum(lm_loss_mask)
# Clip negative labels to zero here to avoid NaNs and errors - those positions will get masked later anyway
unmasked_ns_loss = loss_fn(y_true=tf.nn.relu(labels["next_sentence_label"]), y_pred=logits[1])
ns_loss_mask = tf.cast(labels["next_sentence_label"] != -100, dtype=unmasked_ns_loss.dtype)
masked_ns_loss = unmasked_ns_loss * ns_loss_mask
reduced_masked_ns_loss = tf.reduce_sum(masked_ns_loss) / tf.reduce_sum(ns_loss_mask)
return tf.reshape(reduced_masked_lm_loss + reduced_masked_ns_loss, (1,))
class TFMobileBertIntermediate(tf.keras.layers.Layer):
def __init__(self, config, **kwargs):
super().__init__(**kwargs)
self.dense = tf.keras.layers.Dense(config.intermediate_size, name="dense")
if isinstance(config.hidden_act, str):
self.intermediate_act_fn = get_tf_activation(config.hidden_act)
else:
self.intermediate_act_fn = config.hidden_act
def call(self, hidden_states):
hidden_states = self.dense(hidden_states)
hidden_states = self.intermediate_act_fn(hidden_states)
return hidden_states
class TFLayerNorm(tf.keras.layers.LayerNormalization):
def __init__(self, feat_size, *args, **kwargs):
super().__init__(*args, **kwargs)
class TFNoNorm(tf.keras.layers.Layer):
def __init__(self, feat_size, epsilon=None, **kwargs):
super().__init__(**kwargs)
self.feat_size = feat_size
def build(self, input_shape):
self.bias = self.add_weight("bias", shape=[self.feat_size], initializer="zeros")
self.weight = self.add_weight("weight", shape=[self.feat_size], initializer="ones")
super().build(input_shape)
def call(self, inputs: tf.Tensor):
return inputs * self.weight + self.bias
NORM2FN = {"layer_norm": TFLayerNorm, "no_norm": TFNoNorm}
class TFMobileBertEmbeddings(tf.keras.layers.Layer):
"""Construct the embeddings from word, position and token_type embeddings."""
def __init__(self, config, **kwargs):
super().__init__(**kwargs)
self.trigram_input = config.trigram_input
self.embedding_size = config.embedding_size
self.config = config
self.hidden_size = config.hidden_size
self.max_position_embeddings = config.max_position_embeddings
self.initializer_range = config.initializer_range
self.embedding_transformation = tf.keras.layers.Dense(config.hidden_size, name="embedding_transformation")
# self.LayerNorm is not snake-cased to stick with TensorFlow model variable name and be able to load
# any TensorFlow checkpoint file
self.LayerNorm = NORM2FN[config.normalization_type](
config.hidden_size, epsilon=config.layer_norm_eps, name="LayerNorm"
)
self.dropout = tf.keras.layers.Dropout(rate=config.hidden_dropout_prob)
def build(self, input_shape):
with tf.name_scope("word_embeddings"):
self.weight = self.add_weight(
name="weight",
shape=[self.config.vocab_size, self.embedding_size],
initializer=get_initializer(initializer_range=self.initializer_range),
)
with tf.name_scope("token_type_embeddings"):
self.token_type_embeddings = self.add_weight(
name="embeddings",
shape=[self.config.type_vocab_size, self.hidden_size],
initializer=get_initializer(initializer_range=self.initializer_range),
)
with tf.name_scope("position_embeddings"):
self.position_embeddings = self.add_weight(
name="embeddings",
shape=[self.max_position_embeddings, self.hidden_size],
initializer=get_initializer(initializer_range=self.initializer_range),
)
super().build(input_shape)
def call(self, input_ids=None, position_ids=None, token_type_ids=None, inputs_embeds=None, training=False):
"""
Applies embedding based on inputs tensor.
Returns:
final_embeddings (`tf.Tensor`): output embedding tensor.
"""
assert not (input_ids is None and inputs_embeds is None)
if input_ids is not None:
check_embeddings_within_bounds(input_ids, self.config.vocab_size)
inputs_embeds = tf.gather(params=self.weight, indices=input_ids)
input_shape = shape_list(inputs_embeds)[:-1]
if token_type_ids is None:
token_type_ids = tf.fill(dims=input_shape, value=0)
if self.trigram_input:
# From the paper MobileBERT: a Compact Task-Agnostic BERT for Resource-Limited
# Devices (https://arxiv.org/abs/2004.02984)
#
# The embedding table in BERT models accounts for a substantial proportion of model size. To compress
# the embedding layer, we reduce the embedding dimension to 128 in MobileBERT.
# Then, we apply a 1D convolution with kernel size 3 on the raw token embedding to produce a 512
# dimensional output.
inputs_embeds = tf.concat(
[
tf.pad(inputs_embeds[:, 1:], ((0, 0), (0, 1), (0, 0))),
inputs_embeds,
tf.pad(inputs_embeds[:, :-1], ((0, 0), (1, 0), (0, 0))),
],
axis=2,
)
if self.trigram_input or self.embedding_size != self.hidden_size:
inputs_embeds = self.embedding_transformation(inputs_embeds)
if position_ids is None:
position_ids = tf.expand_dims(tf.range(start=0, limit=input_shape[-1]), axis=0)
position_embeds = tf.gather(params=self.position_embeddings, indices=position_ids)
token_type_embeds = tf.gather(params=self.token_type_embeddings, indices=token_type_ids)
final_embeddings = inputs_embeds + position_embeds + token_type_embeds
final_embeddings = self.LayerNorm(inputs=final_embeddings)
final_embeddings = self.dropout(inputs=final_embeddings, training=training)
return final_embeddings
class TFMobileBertSelfAttention(tf.keras.layers.Layer):
def __init__(self, config, **kwargs):
super().__init__(**kwargs)
if config.hidden_size % config.num_attention_heads != 0:
raise ValueError(
f"The hidden size ({config.hidden_size}) is not a multiple of the number of attention "
f"heads ({config.num_attention_heads}"
)
self.num_attention_heads = config.num_attention_heads
self.output_attentions = config.output_attentions
assert config.hidden_size % config.num_attention_heads == 0
self.attention_head_size = int(config.true_hidden_size / config.num_attention_heads)
self.all_head_size = self.num_attention_heads * self.attention_head_size
self.query = tf.keras.layers.Dense(
self.all_head_size, kernel_initializer=get_initializer(config.initializer_range), name="query"
)
self.key = tf.keras.layers.Dense(
self.all_head_size, kernel_initializer=get_initializer(config.initializer_range), name="key"
)
self.value = tf.keras.layers.Dense(
self.all_head_size, kernel_initializer=get_initializer(config.initializer_range), name="value"
)
self.dropout = tf.keras.layers.Dropout(config.attention_probs_dropout_prob)
def transpose_for_scores(self, x, batch_size):
# Reshape from [batch_size, seq_length, all_head_size] to [batch_size, seq_length, num_attention_heads, attention_head_size]
x = tf.reshape(x, (batch_size, -1, self.num_attention_heads, self.attention_head_size))
return tf.transpose(x, perm=[0, 2, 1, 3])
def call(
self, query_tensor, key_tensor, value_tensor, attention_mask, head_mask, output_attentions, training=False
):
batch_size = shape_list(attention_mask)[0]
mixed_query_layer = self.query(query_tensor)
mixed_key_layer = self.key(key_tensor)
mixed_value_layer = self.value(value_tensor)
query_layer = self.transpose_for_scores(mixed_query_layer, batch_size)
key_layer = self.transpose_for_scores(mixed_key_layer, batch_size)
value_layer = self.transpose_for_scores(mixed_value_layer, batch_size)
# Take the dot product between "query" and "key" to get the raw attention scores.
attention_scores = tf.matmul(
query_layer, key_layer, transpose_b=True
) # (batch size, num_heads, seq_len_q, seq_len_k)
dk = tf.cast(shape_list(key_layer)[-1], dtype=attention_scores.dtype) # scale attention_scores
attention_scores = attention_scores / tf.math.sqrt(dk)
if attention_mask is not None:
# Apply the attention mask is (precomputed for all layers in TFMobileBertModel call() function)
attention_mask = tf.cast(attention_mask, dtype=attention_scores.dtype)
attention_scores = attention_scores + attention_mask
# Normalize the attention scores to probabilities.
attention_probs = stable_softmax(attention_scores, axis=-1)
# This is actually dropping out entire tokens to attend to, which might
# seem a bit unusual, but is taken from the original Transformer paper.
attention_probs = self.dropout(attention_probs, training=training)
# Mask heads if we want to
if head_mask is not None:
attention_probs = attention_probs * head_mask
context_layer = tf.matmul(attention_probs, value_layer)
context_layer = tf.transpose(context_layer, perm=[0, 2, 1, 3])
context_layer = tf.reshape(
context_layer, (batch_size, -1, self.all_head_size)
) # (batch_size, seq_len_q, all_head_size)
outputs = (context_layer, attention_probs) if output_attentions else (context_layer,)
return outputs
class TFMobileBertSelfOutput(tf.keras.layers.Layer):
def __init__(self, config, **kwargs):
super().__init__(**kwargs)
self.use_bottleneck = config.use_bottleneck
self.dense = tf.keras.layers.Dense(
config.true_hidden_size, kernel_initializer=get_initializer(config.initializer_range), name="dense"
)
self.LayerNorm = NORM2FN[config.normalization_type](
config.true_hidden_size, epsilon=config.layer_norm_eps, name="LayerNorm"
)
if not self.use_bottleneck:
self.dropout = tf.keras.layers.Dropout(config.hidden_dropout_prob)
def call(self, hidden_states, residual_tensor, training=False):
hidden_states = self.dense(hidden_states)
if not self.use_bottleneck:
hidden_states = self.dropout(hidden_states, training=training)
hidden_states = self.LayerNorm(hidden_states + residual_tensor)
return hidden_states
class TFMobileBertAttention(tf.keras.layers.Layer):
def __init__(self, config, **kwargs):
super().__init__(**kwargs)
self.self = TFMobileBertSelfAttention(config, name="self")
self.mobilebert_output = TFMobileBertSelfOutput(config, name="output")
def prune_heads(self, heads):
raise NotImplementedError
def call(
self,
query_tensor,
key_tensor,
value_tensor,
layer_input,
attention_mask,
head_mask,
output_attentions,
training=False,
):
self_outputs = self.self(
query_tensor, key_tensor, value_tensor, attention_mask, head_mask, output_attentions, training=training
)
attention_output = self.mobilebert_output(self_outputs[0], layer_input, training=training)
outputs = (attention_output,) + self_outputs[1:] # add attentions if we output them
return outputs
class TFOutputBottleneck(tf.keras.layers.Layer):
def __init__(self, config, **kwargs):
super().__init__(**kwargs)
self.dense = tf.keras.layers.Dense(config.hidden_size, name="dense")
self.LayerNorm = NORM2FN[config.normalization_type](
config.hidden_size, epsilon=config.layer_norm_eps, name="LayerNorm"
)
self.dropout = tf.keras.layers.Dropout(config.hidden_dropout_prob)
def call(self, hidden_states, residual_tensor, training=False):
layer_outputs = self.dense(hidden_states)
layer_outputs = self.dropout(layer_outputs, training=training)
layer_outputs = self.LayerNorm(layer_outputs + residual_tensor)
return layer_outputs
class TFMobileBertOutput(tf.keras.layers.Layer):
def __init__(self, config, **kwargs):
super().__init__(**kwargs)
self.use_bottleneck = config.use_bottleneck
self.dense = tf.keras.layers.Dense(
config.true_hidden_size, kernel_initializer=get_initializer(config.initializer_range), name="dense"
)
self.LayerNorm = NORM2FN[config.normalization_type](
config.true_hidden_size, epsilon=config.layer_norm_eps, name="LayerNorm"
)
if not self.use_bottleneck:
self.dropout = tf.keras.layers.Dropout(config.hidden_dropout_prob)
else:
self.bottleneck = TFOutputBottleneck(config, name="bottleneck")
def call(self, hidden_states, residual_tensor_1, residual_tensor_2, training=False):
hidden_states = self.dense(hidden_states)
if not self.use_bottleneck:
hidden_states = self.dropout(hidden_states, training=training)
hidden_states = self.LayerNorm(hidden_states + residual_tensor_1)
else:
hidden_states = self.LayerNorm(hidden_states + residual_tensor_1)
hidden_states = self.bottleneck(hidden_states, residual_tensor_2)
return hidden_states
class TFBottleneckLayer(tf.keras.layers.Layer):
def __init__(self, config, **kwargs):
super().__init__(**kwargs)
self.dense = tf.keras.layers.Dense(config.intra_bottleneck_size, name="dense")
self.LayerNorm = NORM2FN[config.normalization_type](
config.intra_bottleneck_size, epsilon=config.layer_norm_eps, name="LayerNorm"
)
def call(self, inputs):
hidden_states = self.dense(inputs)
hidden_states = self.LayerNorm(hidden_states)
return hidden_states
class TFBottleneck(tf.keras.layers.Layer):
def __init__(self, config, **kwargs):
super().__init__(**kwargs)
self.key_query_shared_bottleneck = config.key_query_shared_bottleneck
self.use_bottleneck_attention = config.use_bottleneck_attention
self.bottleneck_input = TFBottleneckLayer(config, name="input")
if self.key_query_shared_bottleneck:
self.attention = TFBottleneckLayer(config, name="attention")
def call(self, hidden_states):
# This method can return three different tuples of values. These different values make use of bottlenecks,
# which are linear layers used to project the hidden states to a lower-dimensional vector, reducing memory
# usage. These linear layer have weights that are learned during training.
#
# If `config.use_bottleneck_attention`, it will return the result of the bottleneck layer four times for the
# key, query, value, and "layer input" to be used by the attention layer.
# This bottleneck is used to project the hidden. This last layer input will be used as a residual tensor
# in the attention self output, after the attention scores have been computed.
#
# If not `config.use_bottleneck_attention` and `config.key_query_shared_bottleneck`, this will return
# four values, three of which have been passed through a bottleneck: the query and key, passed through the same
# bottleneck, and the residual layer to be applied in the attention self output, through another bottleneck.
#
# Finally, in the last case, the values for the query, key and values are the hidden states without bottleneck,
# and the residual layer will be this value passed through a bottleneck.
bottlenecked_hidden_states = self.bottleneck_input(hidden_states)
if self.use_bottleneck_attention:
return (bottlenecked_hidden_states,) * 4
elif self.key_query_shared_bottleneck:
shared_attention_input = self.attention(hidden_states)
return (shared_attention_input, shared_attention_input, hidden_states, bottlenecked_hidden_states)
else:
return (hidden_states, hidden_states, hidden_states, bottlenecked_hidden_states)
class TFFFNOutput(tf.keras.layers.Layer):
def __init__(self, config, **kwargs):
super().__init__(**kwargs)
self.dense = tf.keras.layers.Dense(config.true_hidden_size, name="dense")
self.LayerNorm = NORM2FN[config.normalization_type](
config.true_hidden_size, epsilon=config.layer_norm_eps, name="LayerNorm"
)
def call(self, hidden_states, residual_tensor):
hidden_states = self.dense(hidden_states)
hidden_states = self.LayerNorm(hidden_states + residual_tensor)
return hidden_states
class TFFFNLayer(tf.keras.layers.Layer):
def __init__(self, config, **kwargs):
super().__init__(**kwargs)
self.intermediate = TFMobileBertIntermediate(config, name="intermediate")
self.mobilebert_output = TFFFNOutput(config, name="output")
def call(self, hidden_states):
intermediate_output = self.intermediate(hidden_states)
layer_outputs = self.mobilebert_output(intermediate_output, hidden_states)
return layer_outputs
class TFMobileBertLayer(tf.keras.layers.Layer):
def __init__(self, config, **kwargs):
super().__init__(**kwargs)
self.use_bottleneck = config.use_bottleneck
self.num_feedforward_networks = config.num_feedforward_networks
self.attention = TFMobileBertAttention(config, name="attention")
self.intermediate = TFMobileBertIntermediate(config, name="intermediate")
self.mobilebert_output = TFMobileBertOutput(config, name="output")
if self.use_bottleneck:
self.bottleneck = TFBottleneck(config, name="bottleneck")
if config.num_feedforward_networks > 1:
self.ffn = [TFFFNLayer(config, name=f"ffn.{i}") for i in range(config.num_feedforward_networks - 1)]
def call(self, hidden_states, attention_mask, head_mask, output_attentions, training=False):
if self.use_bottleneck:
query_tensor, key_tensor, value_tensor, layer_input = self.bottleneck(hidden_states)
else:
query_tensor, key_tensor, value_tensor, layer_input = [hidden_states] * 4
attention_outputs = self.attention(
query_tensor,
key_tensor,
value_tensor,
layer_input,
attention_mask,
head_mask,
output_attentions,
training=training,
)
attention_output = attention_outputs[0]
s = (attention_output,)
if self.num_feedforward_networks != 1:
for i, ffn_module in enumerate(self.ffn):
attention_output = ffn_module(attention_output)
s += (attention_output,)
intermediate_output = self.intermediate(attention_output)
layer_output = self.mobilebert_output(intermediate_output, attention_output, hidden_states, training=training)
outputs = (
(layer_output,)
+ attention_outputs[1:]
+ (
tf.constant(0),
query_tensor,
key_tensor,
value_tensor,
layer_input,
attention_output,
intermediate_output,
)
+ s
) # add attentions if we output them
return outputs
class TFMobileBertEncoder(tf.keras.layers.Layer):
def __init__(self, config, **kwargs):
super().__init__(**kwargs)
self.output_attentions = config.output_attentions
self.output_hidden_states = config.output_hidden_states
self.layer = [TFMobileBertLayer(config, name=f"layer_._{i}") for i in range(config.num_hidden_layers)]
def call(
self,
hidden_states,
attention_mask,
head_mask,
output_attentions,
output_hidden_states,
return_dict,
training=False,
):
all_hidden_states = () if output_hidden_states else None
all_attentions = () if output_attentions else None
for i, layer_module in enumerate(self.layer):
if output_hidden_states:
all_hidden_states = all_hidden_states + (hidden_states,)
layer_outputs = layer_module(
hidden_states, attention_mask, head_mask[i], output_attentions, training=training
)
hidden_states = layer_outputs[0]
if output_attentions:
all_attentions = all_attentions + (layer_outputs[1],)
# Add last layer
if output_hidden_states:
all_hidden_states = all_hidden_states + (hidden_states,)
if not return_dict:
return tuple(v for v in [hidden_states, all_hidden_states, all_attentions] if v is not None)
return TFBaseModelOutput(
last_hidden_state=hidden_states, hidden_states=all_hidden_states, attentions=all_attentions
)
class TFMobileBertPooler(tf.keras.layers.Layer):
def __init__(self, config, **kwargs):
super().__init__(**kwargs)
self.do_activate = config.classifier_activation
if self.do_activate:
self.dense = tf.keras.layers.Dense(
config.hidden_size,
kernel_initializer=get_initializer(config.initializer_range),
activation="tanh",
name="dense",
)
def call(self, hidden_states):
# We "pool" the model by simply taking the hidden state corresponding
# to the first token.
first_token_tensor = hidden_states[:, 0]
if not self.do_activate:
return first_token_tensor
else:
pooled_output = self.dense(first_token_tensor)
return pooled_output
class TFMobileBertPredictionHeadTransform(tf.keras.layers.Layer):
def __init__(self, config, **kwargs):
super().__init__(**kwargs)
self.dense = tf.keras.layers.Dense(
config.hidden_size, kernel_initializer=get_initializer(config.initializer_range), name="dense"
)
if isinstance(config.hidden_act, str):
self.transform_act_fn = get_tf_activation(config.hidden_act)
else:
self.transform_act_fn = config.hidden_act
self.LayerNorm = NORM2FN["layer_norm"](config.hidden_size, epsilon=config.layer_norm_eps, name="LayerNorm")
def call(self, hidden_states):
hidden_states = self.dense(hidden_states)
hidden_states = self.transform_act_fn(hidden_states)
hidden_states = self.LayerNorm(hidden_states)
return hidden_states
class TFMobileBertLMPredictionHead(tf.keras.layers.Layer):
def __init__(self, config, **kwargs):
super().__init__(**kwargs)
self.transform = TFMobileBertPredictionHeadTransform(config, name="transform")
self.config = config
def build(self, input_shape):
self.bias = self.add_weight(shape=(self.config.vocab_size,), initializer="zeros", trainable=True, name="bias")
self.dense = self.add_weight(
shape=(self.config.hidden_size - self.config.embedding_size, self.config.vocab_size),
initializer="zeros",
trainable=True,
name="dense/weight",
)
self.decoder = self.add_weight(
shape=(self.config.vocab_size, self.config.embedding_size),
initializer="zeros",
trainable=True,
name="decoder/weight",
)
super().build(input_shape)
def get_output_embeddings(self):
return self
def set_output_embeddings(self, value):
self.decoder = value
self.config.vocab_size = shape_list(value)[0]
def get_bias(self):
return {"bias": self.bias}
def set_bias(self, value):
self.bias = value["bias"]
self.config.vocab_size = shape_list(value["bias"])[0]
def call(self, hidden_states):
hidden_states = self.transform(hidden_states)
hidden_states = tf.matmul(hidden_states, tf.concat([tf.transpose(self.decoder), self.dense], axis=0))
hidden_states = hidden_states + self.bias
return hidden_states
class TFMobileBertMLMHead(tf.keras.layers.Layer):
def __init__(self, config, **kwargs):
super().__init__(**kwargs)
self.predictions = TFMobileBertLMPredictionHead(config, name="predictions")
def call(self, sequence_output):
prediction_scores = self.predictions(sequence_output)
return prediction_scores
@keras_serializable
class TFMobileBertMainLayer(tf.keras.layers.Layer):
config_class = MobileBertConfig
def __init__(self, config, add_pooling_layer=True, **kwargs):
super().__init__(**kwargs)
self.config = config
self.num_hidden_layers = config.num_hidden_layers
self.output_attentions = config.output_attentions
self.output_hidden_states = config.output_hidden_states
self.return_dict = config.use_return_dict
self.embeddings = TFMobileBertEmbeddings(config, name="embeddings")
self.encoder = TFMobileBertEncoder(config, name="encoder")
self.pooler = TFMobileBertPooler(config, name="pooler") if add_pooling_layer else None
def get_input_embeddings(self):
return self.embeddings
def set_input_embeddings(self, value):
self.embeddings.weight = value
self.embeddings.vocab_size = shape_list(value)[0]
def _prune_heads(self, heads_to_prune):
"""
Prunes heads of the model. heads_to_prune: dict of {layer_num: list of heads to prune in this layer} See base
class PreTrainedModel
"""
raise NotImplementedError
@unpack_inputs
def call(
self,
input_ids=None,
attention_mask=None,
token_type_ids=None,
position_ids=None,
head_mask=None,
inputs_embeds=None,
output_attentions=None,
output_hidden_states=None,
return_dict=None,
training=False,
):
if input_ids is not None and inputs_embeds is not None:
raise ValueError("You cannot specify both input_ids and inputs_embeds at the same time")
elif input_ids is not None:
input_shape = shape_list(input_ids)
elif inputs_embeds is not None:
input_shape = shape_list(inputs_embeds)[:-1]
else:
raise ValueError("You have to specify either input_ids or inputs_embeds")
if attention_mask is None:
attention_mask = tf.fill(input_shape, 1)
if token_type_ids is None:
token_type_ids = tf.fill(input_shape, 0)
embedding_output = self.embeddings(input_ids, position_ids, token_type_ids, inputs_embeds, training=training)
# We create a 3D attention mask from a 2D tensor mask.
# Sizes are [batch_size, 1, 1, to_seq_length]
# So we can broadcast to [batch_size, num_heads, from_seq_length, to_seq_length]
# this attention mask is more simple than the triangular masking of causal attention
# used in OpenAI GPT, we just need to prepare the broadcast dimension here.
extended_attention_mask = tf.reshape(attention_mask, (input_shape[0], 1, 1, input_shape[1]))
# Since attention_mask is 1.0 for positions we want to attend and 0.0 for
# masked positions, this operation will create a tensor which is 0.0 for
# positions we want to attend and -10000.0 for masked positions.
# Since we are adding it to the raw scores before the softmax, this is
# effectively the same as removing these entirely.
extended_attention_mask = tf.cast(extended_attention_mask, dtype=embedding_output.dtype)
one_cst = tf.constant(1.0, dtype=embedding_output.dtype)
ten_thousand_cst = tf.constant(-10000.0, dtype=embedding_output.dtype)
extended_attention_mask = tf.multiply(tf.subtract(one_cst, extended_attention_mask), ten_thousand_cst)
# Prepare head mask if needed
# 1.0 in head_mask indicate we keep the head
# attention_probs has shape bsz x n_heads x N x N
# input head_mask has shape [num_heads] or [num_hidden_layers x num_heads]
# and head_mask is converted to shape [num_hidden_layers x batch x num_heads x seq_length x seq_length]
if head_mask is not None:
raise NotImplementedError
else:
head_mask = [None] * self.num_hidden_layers
encoder_outputs = self.encoder(
embedding_output,
extended_attention_mask,
head_mask,
output_attentions,
output_hidden_states,
return_dict,
training=training,
)
sequence_output = encoder_outputs[0]
pooled_output = self.pooler(sequence_output) if self.pooler is not None else None
if not return_dict:
return (
sequence_output,
pooled_output,
) + encoder_outputs[1:]
return TFBaseModelOutputWithPooling(
last_hidden_state=sequence_output,
pooler_output=pooled_output,
hidden_states=encoder_outputs.hidden_states,
attentions=encoder_outputs.attentions,
)
class TFMobileBertPreTrainedModel(TFPreTrainedModel):
"""
An abstract class to handle weights initialization and a simple interface for downloading and loading pretrained
models.
"""
config_class = MobileBertConfig
base_model_prefix = "mobilebert"
@dataclass
class TFMobileBertForPreTrainingOutput(ModelOutput):
"""
Output type of [`TFMobileBertForPreTraining`].
Args:
prediction_logits (`tf.Tensor` of shape `(batch_size, sequence_length, config.vocab_size)`):
Prediction scores of the language modeling head (scores for each vocabulary token before SoftMax).
seq_relationship_logits (`tf.Tensor` of shape `(batch_size, 2)`):
Prediction scores of the next sequence prediction (classification) head (scores of True/False continuation
before SoftMax).
hidden_states (`tuple(tf.Tensor)`, *optional*, returned when `output_hidden_states=True` is passed or when `config.output_hidden_states=True`):
Tuple of `tf.Tensor` (one for the output of the embeddings + one for the output of each layer) of shape
`(batch_size, sequence_length, hidden_size)`.
Hidden-states of the model at the output of each layer plus the initial embedding outputs.
attentions (`tuple(tf.Tensor)`, *optional*, returned when `output_attentions=True` is passed or when `config.output_attentions=True`):
Tuple of `tf.Tensor` (one for each layer) of shape `(batch_size, num_heads, sequence_length,
sequence_length)`.
Attentions weights after the attention softmax, used to compute the weighted average in the self-attention
heads.
"""
loss: tf.Tensor | None = None
prediction_logits: tf.Tensor = None
seq_relationship_logits: tf.Tensor = None
hidden_states: Tuple[tf.Tensor] | None = None
attentions: Tuple[tf.Tensor] | None = None
MOBILEBERT_START_DOCSTRING = r"""
This model inherits from [`TFPreTrainedModel`]. Check the superclass documentation for the generic methods the
library implements for all its model (such as downloading or saving, resizing the input embeddings, pruning heads
etc.)
This model is also a [tf.keras.Model](https://www.tensorflow.org/api_docs/python/tf/keras/Model) subclass. Use it
as a regular TF 2.0 Keras Model and refer to the TF 2.0 documentation for all matter related to general usage and
behavior.
<Tip>
TensorFlow models and layers in `transformers` accept two formats as input:
- having all inputs as keyword arguments (like PyTorch models), or
- having all inputs as a list, tuple or dict in the first positional argument.
The reason the second format is supported is that Keras methods prefer this format when passing inputs to models
and layers. Because of this support, when using methods like `model.fit()` things should "just work" for you - just
pass your inputs and labels in any format that `model.fit()` supports! If, however, you want to use the second
format outside of Keras methods like `fit()` and `predict()`, such as when creating your own layers or models with
the Keras `Functional` API, there are three possibilities you can use to gather all the input Tensors in the first
positional argument:
- a single Tensor with `input_ids` only and nothing else: `model(input_ids)`
- a list of varying length with one or several input Tensors IN THE ORDER given in the docstring:
`model([input_ids, attention_mask])` or `model([input_ids, attention_mask, token_type_ids])`
- a dictionary with one or several input Tensors associated to the input names given in the docstring:
`model({"input_ids": input_ids, "token_type_ids": token_type_ids})`
Note that when creating models and layers with
[subclassing](https://keras.io/guides/making_new_layers_and_models_via_subclassing/) then you don't need to worry
about any of this, as you can just pass inputs like you would to any other Python function!
</Tip>
Parameters:
config ([`MobileBertConfig`]): Model configuration class with all the parameters of the model.
Initializing with a config file does not load the weights associated with the model, only the
configuration. Check out the [`~PreTrainedModel.from_pretrained`] method to load the model weights.
"""
MOBILEBERT_INPUTS_DOCSTRING = r"""
Args:
input_ids (`Numpy array` or `tf.Tensor` of shape `({0})`):
Indices of input sequence tokens in the vocabulary.
Indices can be obtained using [`AutoTokenizer`]. See [`PreTrainedTokenizer.__call__`] and
[`PreTrainedTokenizer.encode`] for details.
[What are input IDs?](../glossary#input-ids)
attention_mask (`Numpy array` or `tf.Tensor` of shape `({0})`, *optional*):
Mask to avoid performing attention on padding token indices. Mask values selected in `[0, 1]`:
- 1 for tokens that are **not masked**,
- 0 for tokens that are **masked**.
[What are attention masks?](../glossary#attention-mask)
token_type_ids (`Numpy array` or `tf.Tensor` of shape `({0})`, *optional*):
Segment token indices to indicate first and second portions of the inputs. Indices are selected in `[0,
1]`:
- 0 corresponds to a *sentence A* token,
- 1 corresponds to a *sentence B* token.
[What are token type IDs?](../glossary#token-type-ids)
position_ids (`Numpy array` or `tf.Tensor` of shape `({0})`, *optional*):
Indices of positions of each input sequence tokens in the position embeddings. Selected in the range `[0,
config.max_position_embeddings - 1]`.
[What are position IDs?](../glossary#position-ids)
head_mask (`Numpy array` or `tf.Tensor` of shape `(num_heads,)` or `(num_layers, num_heads)`, *optional*):
Mask to nullify selected heads of the self-attention modules. Mask values selected in `[0, 1]`:
- 1 indicates the head is **not masked**,
- 0 indicates the head is **masked**.
inputs_embeds (`tf.Tensor` of shape `({0}, hidden_size)`, *optional*):
Optionally, instead of passing `input_ids` you can choose to directly pass an embedded representation. This
is useful if you want more control over how to convert `input_ids` indices into associated vectors than the
model's internal embedding lookup matrix.
output_attentions (`bool`, *optional*):
Whether or not to return the attentions tensors of all attention layers. See `attentions` under returned
tensors for more detail. This argument can be used only in eager mode, in graph mode the value in the
config will be used instead.
output_hidden_states (`bool`, *optional*):
Whether or not to return the hidden states of all layers. See `hidden_states` under returned tensors for
more detail. This argument can be used only in eager mode, in graph mode the value in the config will be
used instead.
return_dict (`bool`, *optional*):
Whether or not to return a [`~utils.ModelOutput`] instead of a plain tuple. This argument can be used in
eager mode, in graph mode the value will always be set to True.
training (`bool`, *optional*, defaults to `False`):
Whether or not to use the model in training mode (some modules like dropout modules have different
behaviors between training and evaluation).
"""
@add_start_docstrings(
"The bare MobileBert Model transformer outputting raw hidden-states without any specific head on top.",
MOBILEBERT_START_DOCSTRING,
)
class TFMobileBertModel(TFMobileBertPreTrainedModel):
def __init__(self, config, *inputs, **kwargs):
super().__init__(config, *inputs, **kwargs)
self.mobilebert = TFMobileBertMainLayer(config, name="mobilebert")
@unpack_inputs
@add_start_docstrings_to_model_forward(MOBILEBERT_INPUTS_DOCSTRING.format("batch_size, sequence_length"))
@add_code_sample_docstrings(
checkpoint=_CHECKPOINT_FOR_DOC,
output_type=TFBaseModelOutputWithPooling,
config_class=_CONFIG_FOR_DOC,
)
def call(
self,
input_ids: TFModelInputType | None = None,
attention_mask: np.ndarray | tf.Tensor | None = None,
token_type_ids: np.ndarray | tf.Tensor | None = None,
position_ids: np.ndarray | tf.Tensor | None = None,
head_mask: np.ndarray | tf.Tensor | None = None,
inputs_embeds: np.ndarray | tf.Tensor | None = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
training: Optional[bool] = False,
) -> Union[Tuple, TFBaseModelOutputWithPooling]:
outputs = self.mobilebert(
input_ids=input_ids,
attention_mask=attention_mask,
token_type_ids=token_type_ids,
position_ids=position_ids,
head_mask=head_mask,
inputs_embeds=inputs_embeds,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
training=training,
)
return outputs
@add_start_docstrings(
"""
MobileBert Model with two heads on top as done during the pretraining: a `masked language modeling` head and a
`next sentence prediction (classification)` head.
""",
MOBILEBERT_START_DOCSTRING,
)
class TFMobileBertForPreTraining(TFMobileBertPreTrainedModel, TFMobileBertPreTrainingLoss):
def __init__(self, config, *inputs, **kwargs):
super().__init__(config, *inputs, **kwargs)
self.mobilebert = TFMobileBertMainLayer(config, name="mobilebert")
self.predictions = TFMobileBertMLMHead(config, name="predictions___cls")
self.seq_relationship = TFMobileBertOnlyNSPHead(2, name="seq_relationship___cls")
def get_lm_head(self):
return self.predictions.predictions
def get_prefix_bias_name(self):
warnings.warn("The method get_prefix_bias_name is deprecated. Please use `get_bias` instead.", FutureWarning)
return self.name + "/" + self.predictions.name + "/" + self.predictions.predictions.name
@unpack_inputs
@add_start_docstrings_to_model_forward(MOBILEBERT_INPUTS_DOCSTRING.format("batch_size, sequence_length"))
@replace_return_docstrings(output_type=TFMobileBertForPreTrainingOutput, config_class=_CONFIG_FOR_DOC)
def call(
self,
input_ids: TFModelInputType | None = None,
attention_mask: np.ndarray | tf.Tensor | None = None,
token_type_ids: np.ndarray | tf.Tensor | None = None,
position_ids: np.ndarray | tf.Tensor | None = None,
head_mask: np.ndarray | tf.Tensor | None = None,
inputs_embeds: np.ndarray | tf.Tensor | None = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
labels: np.ndarray | tf.Tensor | None = None,
next_sentence_label: np.ndarray | tf.Tensor | None = None,
training: Optional[bool] = False,
) -> Union[Tuple, TFMobileBertForPreTrainingOutput]:
r"""
Return:
Examples:
```python
>>> import tensorflow as tf
>>> from transformers import AutoTokenizer, TFMobileBertForPreTraining
>>> tokenizer = AutoTokenizer.from_pretrained("google/mobilebert-uncased")
>>> model = TFMobileBertForPreTraining.from_pretrained("google/mobilebert-uncased")
>>> input_ids = tf.constant(tokenizer.encode("Hello, my dog is cute"))[None, :] # Batch size 1
>>> outputs = model(input_ids)
>>> prediction_scores, seq_relationship_scores = outputs[:2]
```"""
outputs = self.mobilebert(
input_ids,
attention_mask=attention_mask,
token_type_ids=token_type_ids,
position_ids=position_ids,
head_mask=head_mask,
inputs_embeds=inputs_embeds,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
training=training,
)
sequence_output, pooled_output = outputs[:2]
prediction_scores = self.predictions(sequence_output)
seq_relationship_score = self.seq_relationship(pooled_output)
total_loss = None
if labels is not None and next_sentence_label is not None:
d_labels = {"labels": labels}
d_labels["next_sentence_label"] = next_sentence_label
total_loss = self.hf_compute_loss(labels=d_labels, logits=(prediction_scores, seq_relationship_score))
if not return_dict:
output = (prediction_scores, seq_relationship_score) + outputs[2:]
return ((total_loss,) + output) if total_loss is not None else output
return TFMobileBertForPreTrainingOutput(
loss=total_loss,
prediction_logits=prediction_scores,
seq_relationship_logits=seq_relationship_score,
hidden_states=outputs.hidden_states,
attentions=outputs.attentions,
)
@add_start_docstrings("""MobileBert Model with a `language modeling` head on top.""", MOBILEBERT_START_DOCSTRING)
class TFMobileBertForMaskedLM(TFMobileBertPreTrainedModel, TFMaskedLanguageModelingLoss):
# names with a '.' represents the authorized unexpected/missing layers when a TF model is loaded from a PT model
_keys_to_ignore_on_load_unexpected = [
r"pooler",
r"seq_relationship___cls",
r"cls.seq_relationship",
]
def __init__(self, config, *inputs, **kwargs):
super().__init__(config, *inputs, **kwargs)
self.mobilebert = TFMobileBertMainLayer(config, add_pooling_layer=False, name="mobilebert")
self.predictions = TFMobileBertMLMHead(config, name="predictions___cls")
def get_lm_head(self):
return self.predictions.predictions
def get_prefix_bias_name(self):
warnings.warn("The method get_prefix_bias_name is deprecated. Please use `get_bias` instead.", FutureWarning)
return self.name + "/" + self.mlm.name + "/" + self.mlm.predictions.name
@unpack_inputs
@add_start_docstrings_to_model_forward(MOBILEBERT_INPUTS_DOCSTRING.format("batch_size, sequence_length"))
@add_code_sample_docstrings(
checkpoint=_CHECKPOINT_FOR_DOC,
output_type=TFMaskedLMOutput,
config_class=_CONFIG_FOR_DOC,
expected_output="'paris'",
expected_loss=0.57,
)
def call(
self,
input_ids: TFModelInputType | None = None,
attention_mask: np.ndarray | tf.Tensor | None = None,
token_type_ids: np.ndarray | tf.Tensor | None = None,
position_ids: np.ndarray | tf.Tensor | None = None,
head_mask: np.ndarray | tf.Tensor | None = None,
inputs_embeds: np.ndarray | tf.Tensor | None = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
labels: np.ndarray | tf.Tensor | None = None,
training: Optional[bool] = False,
) -> Union[Tuple, TFMaskedLMOutput]:
r"""
labels (`tf.Tensor` of shape `(batch_size, sequence_length)`, *optional*):
Labels for computing the masked language modeling loss. Indices should be in `[-100, 0, ...,
config.vocab_size]` (see `input_ids` docstring) Tokens with indices set to `-100` are ignored (masked), the
loss is only computed for the tokens with labels
"""
outputs = self.mobilebert(
input_ids,
attention_mask=attention_mask,
token_type_ids=token_type_ids,
position_ids=position_ids,
head_mask=head_mask,
inputs_embeds=inputs_embeds,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
training=training,
)
sequence_output = outputs[0]
prediction_scores = self.predictions(sequence_output, training=training)
loss = None if labels is None else self.hf_compute_loss(labels, prediction_scores)
if not return_dict:
output = (prediction_scores,) + outputs[2:]
return ((loss,) + output) if loss is not None else output
return TFMaskedLMOutput(
loss=loss,
logits=prediction_scores,
hidden_states=outputs.hidden_states,
attentions=outputs.attentions,
)
class TFMobileBertOnlyNSPHead(tf.keras.layers.Layer):
def __init__(self, config, **kwargs):
super().__init__(**kwargs)
self.seq_relationship = tf.keras.layers.Dense(2, name="seq_relationship")
def call(self, pooled_output):
seq_relationship_score = self.seq_relationship(pooled_output)
return seq_relationship_score
@add_start_docstrings(
"""MobileBert Model with a `next sentence prediction (classification)` head on top.""",
MOBILEBERT_START_DOCSTRING,
)
class TFMobileBertForNextSentencePrediction(TFMobileBertPreTrainedModel, TFNextSentencePredictionLoss):
# names with a '.' represents the authorized unexpected/missing layers when a TF model is loaded from a PT model
_keys_to_ignore_on_load_unexpected = [r"predictions___cls", r"cls.predictions"]
def __init__(self, config, *inputs, **kwargs):
super().__init__(config, *inputs, **kwargs)
self.mobilebert = TFMobileBertMainLayer(config, name="mobilebert")
self.cls = TFMobileBertOnlyNSPHead(config, name="seq_relationship___cls")
@unpack_inputs
@add_start_docstrings_to_model_forward(MOBILEBERT_INPUTS_DOCSTRING.format("batch_size, sequence_length"))
@replace_return_docstrings(output_type=TFNextSentencePredictorOutput, config_class=_CONFIG_FOR_DOC)
def call(
self,
input_ids: TFModelInputType | None = None,
attention_mask: np.ndarray | tf.Tensor | None = None,
token_type_ids: np.ndarray | tf.Tensor | None = None,
position_ids: np.ndarray | tf.Tensor | None = None,
head_mask: np.ndarray | tf.Tensor | None = None,
inputs_embeds: np.ndarray | tf.Tensor | None = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
next_sentence_label: np.ndarray | tf.Tensor | None = None,
training: Optional[bool] = False,
) -> Union[Tuple, TFNextSentencePredictorOutput]:
r"""
Return:
Examples:
```python
>>> import tensorflow as tf
>>> from transformers import AutoTokenizer, TFMobileBertForNextSentencePrediction
>>> tokenizer = AutoTokenizer.from_pretrained("google/mobilebert-uncased")
>>> model = TFMobileBertForNextSentencePrediction.from_pretrained("google/mobilebert-uncased")
>>> prompt = "In Italy, pizza served in formal settings, such as at a restaurant, is presented unsliced."
>>> next_sentence = "The sky is blue due to the shorter wavelength of blue light."
>>> encoding = tokenizer(prompt, next_sentence, return_tensors="tf")
>>> logits = model(encoding["input_ids"], token_type_ids=encoding["token_type_ids"])[0]
```"""
outputs = self.mobilebert(
input_ids,
attention_mask=attention_mask,
token_type_ids=token_type_ids,
position_ids=position_ids,
head_mask=head_mask,
inputs_embeds=inputs_embeds,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
training=training,
)
pooled_output = outputs[1]
seq_relationship_scores = self.cls(pooled_output)
next_sentence_loss = (
None
if next_sentence_label is None
else self.hf_compute_loss(labels=next_sentence_label, logits=seq_relationship_scores)
)
if not return_dict:
output = (seq_relationship_scores,) + outputs[2:]
return ((next_sentence_loss,) + output) if next_sentence_loss is not None else output
return TFNextSentencePredictorOutput(
loss=next_sentence_loss,
logits=seq_relationship_scores,
hidden_states=outputs.hidden_states,
attentions=outputs.attentions,
)
@add_start_docstrings(
"""
MobileBert Model transformer with a sequence classification/regression head on top (a linear layer on top of the
pooled output) e.g. for GLUE tasks.
""",
MOBILEBERT_START_DOCSTRING,
)
class TFMobileBertForSequenceClassification(TFMobileBertPreTrainedModel, TFSequenceClassificationLoss):
# names with a '.' represents the authorized unexpected/missing layers when a TF model is loaded from a PT model
_keys_to_ignore_on_load_unexpected = [
r"predictions___cls",
r"seq_relationship___cls",
r"cls.predictions",
r"cls.seq_relationship",
]
_keys_to_ignore_on_load_missing = [r"dropout"]
def __init__(self, config, *inputs, **kwargs):
super().__init__(config, *inputs, **kwargs)
self.num_labels = config.num_labels
self.mobilebert = TFMobileBertMainLayer(config, name="mobilebert")
classifier_dropout = (
config.classifier_dropout if config.classifier_dropout is not None else config.hidden_dropout_prob
)
self.dropout = tf.keras.layers.Dropout(classifier_dropout)
self.classifier = tf.keras.layers.Dense(
config.num_labels, kernel_initializer=get_initializer(config.initializer_range), name="classifier"
)
@unpack_inputs
@add_start_docstrings_to_model_forward(MOBILEBERT_INPUTS_DOCSTRING.format("batch_size, sequence_length"))
@add_code_sample_docstrings(
checkpoint=_CHECKPOINT_FOR_SEQUENCE_CLASSIFICATION,
output_type=TFSequenceClassifierOutput,
config_class=_CONFIG_FOR_DOC,
expected_output=_SEQ_CLASS_EXPECTED_OUTPUT,
expected_loss=_SEQ_CLASS_EXPECTED_LOSS,
)
def call(
self,
input_ids: TFModelInputType | None = None,
attention_mask: np.ndarray | tf.Tensor | None = None,
token_type_ids: np.ndarray | tf.Tensor | None = None,
position_ids: np.ndarray | tf.Tensor | None = None,
head_mask: np.ndarray | tf.Tensor | None = None,
inputs_embeds: np.ndarray | tf.Tensor | None = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
labels: np.ndarray | tf.Tensor | None = None,
training: Optional[bool] = False,
) -> Union[Tuple, TFSequenceClassifierOutput]:
r"""
labels (`tf.Tensor` of shape `(batch_size,)`, *optional*):
Labels for computing the sequence classification/regression loss. Indices should be in `[0, ...,
config.num_labels - 1]`. If `config.num_labels == 1` a regression loss is computed (Mean-Square loss), If
`config.num_labels > 1` a classification loss is computed (Cross-Entropy).
"""
outputs = self.mobilebert(
input_ids,
attention_mask=attention_mask,
token_type_ids=token_type_ids,
position_ids=position_ids,
head_mask=head_mask,
inputs_embeds=inputs_embeds,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
training=training,
)
pooled_output = outputs[1]
pooled_output = self.dropout(pooled_output, training=training)
logits = self.classifier(pooled_output)
loss = None if labels is None else self.hf_compute_loss(labels, logits)
if not return_dict:
output = (logits,) + outputs[2:]
return ((loss,) + output) if loss is not None else output
return TFSequenceClassifierOutput(
loss=loss,
logits=logits,
hidden_states=outputs.hidden_states,
attentions=outputs.attentions,
)
@add_start_docstrings(
"""
MobileBert Model with a span classification head on top for extractive question-answering tasks like SQuAD (a
linear layers on top of the hidden-states output to compute `span start logits` and `span end logits`).
""",
MOBILEBERT_START_DOCSTRING,
)
class TFMobileBertForQuestionAnswering(TFMobileBertPreTrainedModel, TFQuestionAnsweringLoss):
# names with a '.' represents the authorized unexpected/missing layers when a TF model is loaded from a PT model
_keys_to_ignore_on_load_unexpected = [
r"pooler",
r"predictions___cls",
r"seq_relationship___cls",
r"cls.predictions",
r"cls.seq_relationship",
]
def __init__(self, config, *inputs, **kwargs):
super().__init__(config, *inputs, **kwargs)
self.num_labels = config.num_labels
self.mobilebert = TFMobileBertMainLayer(config, add_pooling_layer=False, name="mobilebert")
self.qa_outputs = tf.keras.layers.Dense(
config.num_labels, kernel_initializer=get_initializer(config.initializer_range), name="qa_outputs"
)
@unpack_inputs
@add_start_docstrings_to_model_forward(MOBILEBERT_INPUTS_DOCSTRING.format("batch_size, sequence_length"))
@add_code_sample_docstrings(
checkpoint=_CHECKPOINT_FOR_QA,
output_type=TFQuestionAnsweringModelOutput,
config_class=_CONFIG_FOR_DOC,
qa_target_start_index=_QA_TARGET_START_INDEX,
qa_target_end_index=_QA_TARGET_END_INDEX,
expected_output=_QA_EXPECTED_OUTPUT,
expected_loss=_QA_EXPECTED_LOSS,
)
def call(
self,
input_ids: TFModelInputType | None = None,
attention_mask: np.ndarray | tf.Tensor | None = None,
token_type_ids: np.ndarray | tf.Tensor | None = None,
position_ids: np.ndarray | tf.Tensor | None = None,
head_mask: np.ndarray | tf.Tensor | None = None,
inputs_embeds: np.ndarray | tf.Tensor | None = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
start_positions: np.ndarray | tf.Tensor | None = None,
end_positions: np.ndarray | tf.Tensor | None = None,
training: Optional[bool] = False,
) -> Union[Tuple, TFQuestionAnsweringModelOutput]:
r"""
start_positions (`tf.Tensor` of shape `(batch_size,)`, *optional*):
Labels for position (index) of the start of the labelled span for computing the token classification loss.
Positions are clamped to the length of the sequence (`sequence_length`). Position outside of the sequence
are not taken into account for computing the loss.
end_positions (`tf.Tensor` of shape `(batch_size,)`, *optional*):
Labels for position (index) of the end of the labelled span for computing the token classification loss.
Positions are clamped to the length of the sequence (`sequence_length`). Position outside of the sequence
are not taken into account for computing the loss.
"""
outputs = self.mobilebert(
input_ids,
attention_mask=attention_mask,
token_type_ids=token_type_ids,
position_ids=position_ids,
head_mask=head_mask,
inputs_embeds=inputs_embeds,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
training=training,
)
sequence_output = outputs[0]
logits = self.qa_outputs(sequence_output)
start_logits, end_logits = tf.split(logits, 2, axis=-1)
start_logits = tf.squeeze(start_logits, axis=-1)
end_logits = tf.squeeze(end_logits, axis=-1)
loss = None
if start_positions is not None and end_positions is not None:
labels = {"start_position": start_positions, "end_position": end_positions}
loss = self.hf_compute_loss(labels, (start_logits, end_logits))
if not return_dict:
output = (start_logits, end_logits) + outputs[2:]
return ((loss,) + output) if loss is not None else output
return TFQuestionAnsweringModelOutput(
loss=loss,
start_logits=start_logits,
end_logits=end_logits,
hidden_states=outputs.hidden_states,
attentions=outputs.attentions,
)
@add_start_docstrings(
"""
MobileBert Model with a multiple choice classification head on top (a linear layer on top of the pooled output and
a softmax) e.g. for RocStories/SWAG tasks.
""",
MOBILEBERT_START_DOCSTRING,
)
class TFMobileBertForMultipleChoice(TFMobileBertPreTrainedModel, TFMultipleChoiceLoss):
# names with a '.' represents the authorized unexpected/missing layers when a TF model is loaded from a PT model
_keys_to_ignore_on_load_unexpected = [
r"predictions___cls",
r"seq_relationship___cls",
r"cls.predictions",
r"cls.seq_relationship",
]
_keys_to_ignore_on_load_missing = [r"dropout"]
def __init__(self, config, *inputs, **kwargs):
super().__init__(config, *inputs, **kwargs)
self.mobilebert = TFMobileBertMainLayer(config, name="mobilebert")
self.dropout = tf.keras.layers.Dropout(config.hidden_dropout_prob)
self.classifier = tf.keras.layers.Dense(
1, kernel_initializer=get_initializer(config.initializer_range), name="classifier"
)
@unpack_inputs
@add_start_docstrings_to_model_forward(
MOBILEBERT_INPUTS_DOCSTRING.format("batch_size, num_choices, sequence_length")
)
@add_code_sample_docstrings(
checkpoint=_CHECKPOINT_FOR_DOC,
output_type=TFMultipleChoiceModelOutput,
config_class=_CONFIG_FOR_DOC,
)
def call(
self,
input_ids: TFModelInputType | None = None,
attention_mask: np.ndarray | tf.Tensor | None = None,
token_type_ids: np.ndarray | tf.Tensor | None = None,
position_ids: np.ndarray | tf.Tensor | None = None,
head_mask: np.ndarray | tf.Tensor | None = None,
inputs_embeds: np.ndarray | tf.Tensor | None = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
labels: np.ndarray | tf.Tensor | None = None,
training: Optional[bool] = False,
) -> Union[Tuple, TFMultipleChoiceModelOutput]:
r"""
labels (`tf.Tensor` of shape `(batch_size,)`, *optional*):
Labels for computing the multiple choice classification loss. Indices should be in `[0, ..., num_choices]`
where `num_choices` is the size of the second dimension of the input tensors. (See `input_ids` above)
"""
if input_ids is not None:
num_choices = shape_list(input_ids)[1]
seq_length = shape_list(input_ids)[2]
else:
num_choices = shape_list(inputs_embeds)[1]
seq_length = shape_list(inputs_embeds)[2]
flat_input_ids = tf.reshape(input_ids, (-1, seq_length)) if input_ids is not None else None
flat_attention_mask = tf.reshape(attention_mask, (-1, seq_length)) if attention_mask is not None else None
flat_token_type_ids = tf.reshape(token_type_ids, (-1, seq_length)) if token_type_ids is not None else None
flat_position_ids = tf.reshape(position_ids, (-1, seq_length)) if position_ids is not None else None
flat_inputs_embeds = (
tf.reshape(inputs_embeds, (-1, seq_length, shape_list(inputs_embeds)[3]))
if inputs_embeds is not None
else None
)
outputs = self.mobilebert(
flat_input_ids,
flat_attention_mask,
flat_token_type_ids,
flat_position_ids,
head_mask,
flat_inputs_embeds,
output_attentions,
output_hidden_states,
return_dict=return_dict,
training=training,
)
pooled_output = outputs[1]
pooled_output = self.dropout(pooled_output, training=training)
logits = self.classifier(pooled_output)
reshaped_logits = tf.reshape(logits, (-1, num_choices))
loss = None if labels is None else self.hf_compute_loss(labels, reshaped_logits)
if not return_dict:
output = (reshaped_logits,) + outputs[2:]
return ((loss,) + output) if loss is not None else output
return TFMultipleChoiceModelOutput(
loss=loss,
logits=reshaped_logits,
hidden_states=outputs.hidden_states,
attentions=outputs.attentions,
)
@add_start_docstrings(
"""
MobileBert Model with a token classification head on top (a linear layer on top of the hidden-states output) e.g.
for Named-Entity-Recognition (NER) tasks.
""",
MOBILEBERT_START_DOCSTRING,
)
class TFMobileBertForTokenClassification(TFMobileBertPreTrainedModel, TFTokenClassificationLoss):
# names with a '.' represents the authorized unexpected/missing layers when a TF model is loaded from a PT model
_keys_to_ignore_on_load_unexpected = [
r"pooler",
r"predictions___cls",
r"seq_relationship___cls",
r"cls.predictions",
r"cls.seq_relationship",
]
_keys_to_ignore_on_load_missing = [r"dropout"]
def __init__(self, config, *inputs, **kwargs):
super().__init__(config, *inputs, **kwargs)
self.num_labels = config.num_labels
self.mobilebert = TFMobileBertMainLayer(config, add_pooling_layer=False, name="mobilebert")
classifier_dropout = (
config.classifier_dropout if config.classifier_dropout is not None else config.hidden_dropout_prob
)
self.dropout = tf.keras.layers.Dropout(classifier_dropout)
self.classifier = tf.keras.layers.Dense(
config.num_labels, kernel_initializer=get_initializer(config.initializer_range), name="classifier"
)
@unpack_inputs
@add_start_docstrings_to_model_forward(MOBILEBERT_INPUTS_DOCSTRING.format("batch_size, sequence_length"))
@add_code_sample_docstrings(
checkpoint=_CHECKPOINT_FOR_TOKEN_CLASSIFICATION,
output_type=TFTokenClassifierOutput,
config_class=_CONFIG_FOR_DOC,
expected_output=_TOKEN_CLASS_EXPECTED_OUTPUT,
expected_loss=_TOKEN_CLASS_EXPECTED_LOSS,
)
def call(
self,
input_ids: TFModelInputType | None = None,
attention_mask: np.ndarray | tf.Tensor | None = None,
token_type_ids: np.ndarray | tf.Tensor | None = None,
position_ids: np.ndarray | tf.Tensor | None = None,
head_mask: np.ndarray | tf.Tensor | None = None,
inputs_embeds: np.ndarray | tf.Tensor | None = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
labels: np.ndarray | tf.Tensor | None = None,
training: Optional[bool] = False,
) -> Union[Tuple, TFTokenClassifierOutput]:
r"""
labels (`tf.Tensor` of shape `(batch_size, sequence_length)`, *optional*):
Labels for computing the token classification loss. Indices should be in `[0, ..., config.num_labels - 1]`.
"""
outputs = self.mobilebert(
input_ids,
attention_mask=attention_mask,
token_type_ids=token_type_ids,
position_ids=position_ids,
head_mask=head_mask,
inputs_embeds=inputs_embeds,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
training=training,
)
sequence_output = outputs[0]
sequence_output = self.dropout(sequence_output, training=training)
logits = self.classifier(sequence_output)
loss = None if labels is None else self.hf_compute_loss(labels, logits)
if not return_dict:
output = (logits,) + outputs[2:]
return ((loss,) + output) if loss is not None else output
return TFTokenClassifierOutput(
loss=loss,
logits=logits,
hidden_states=outputs.hidden_states,
attentions=outputs.attentions,
)
| 70,944 | 42.232785 | 151 | py |
transformers | transformers-main/src/transformers/models/mobilebert/convert_mobilebert_original_tf_checkpoint_to_pytorch.py | # Copyright 2020 The HuggingFace Team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
import argparse
import torch
from transformers import MobileBertConfig, MobileBertForPreTraining, load_tf_weights_in_mobilebert
from transformers.utils import logging
logging.set_verbosity_info()
def convert_tf_checkpoint_to_pytorch(tf_checkpoint_path, mobilebert_config_file, pytorch_dump_path):
# Initialise PyTorch model
config = MobileBertConfig.from_json_file(mobilebert_config_file)
print(f"Building PyTorch model from configuration: {config}")
model = MobileBertForPreTraining(config)
# Load weights from tf checkpoint
model = load_tf_weights_in_mobilebert(model, config, tf_checkpoint_path)
# Save pytorch-model
print(f"Save PyTorch model to {pytorch_dump_path}")
torch.save(model.state_dict(), pytorch_dump_path)
if __name__ == "__main__":
parser = argparse.ArgumentParser()
# Required parameters
parser.add_argument(
"--tf_checkpoint_path", default=None, type=str, required=True, help="Path to the TensorFlow checkpoint path."
)
parser.add_argument(
"--mobilebert_config_file",
default=None,
type=str,
required=True,
help=(
"The config json file corresponding to the pre-trained MobileBERT model. \n"
"This specifies the model architecture."
),
)
parser.add_argument(
"--pytorch_dump_path", default=None, type=str, required=True, help="Path to the output PyTorch model."
)
args = parser.parse_args()
convert_tf_checkpoint_to_pytorch(args.tf_checkpoint_path, args.mobilebert_config_file, args.pytorch_dump_path)
| 2,200 | 36.305085 | 117 | py |
transformers | transformers-main/src/transformers/models/mobilebert/__init__.py | # Copyright 2020 The HuggingFace Team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
from typing import TYPE_CHECKING
from ...utils import (
OptionalDependencyNotAvailable,
_LazyModule,
is_tf_available,
is_tokenizers_available,
is_torch_available,
)
_import_structure = {
"configuration_mobilebert": [
"MOBILEBERT_PRETRAINED_CONFIG_ARCHIVE_MAP",
"MobileBertConfig",
"MobileBertOnnxConfig",
],
"tokenization_mobilebert": ["MobileBertTokenizer"],
}
try:
if not is_tokenizers_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
_import_structure["tokenization_mobilebert_fast"] = ["MobileBertTokenizerFast"]
try:
if not is_torch_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
_import_structure["modeling_mobilebert"] = [
"MOBILEBERT_PRETRAINED_MODEL_ARCHIVE_LIST",
"MobileBertForMaskedLM",
"MobileBertForMultipleChoice",
"MobileBertForNextSentencePrediction",
"MobileBertForPreTraining",
"MobileBertForQuestionAnswering",
"MobileBertForSequenceClassification",
"MobileBertForTokenClassification",
"MobileBertLayer",
"MobileBertModel",
"MobileBertPreTrainedModel",
"load_tf_weights_in_mobilebert",
]
try:
if not is_tf_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
_import_structure["modeling_tf_mobilebert"] = [
"TF_MOBILEBERT_PRETRAINED_MODEL_ARCHIVE_LIST",
"TFMobileBertForMaskedLM",
"TFMobileBertForMultipleChoice",
"TFMobileBertForNextSentencePrediction",
"TFMobileBertForPreTraining",
"TFMobileBertForQuestionAnswering",
"TFMobileBertForSequenceClassification",
"TFMobileBertForTokenClassification",
"TFMobileBertMainLayer",
"TFMobileBertModel",
"TFMobileBertPreTrainedModel",
]
if TYPE_CHECKING:
from .configuration_mobilebert import (
MOBILEBERT_PRETRAINED_CONFIG_ARCHIVE_MAP,
MobileBertConfig,
MobileBertOnnxConfig,
)
from .tokenization_mobilebert import MobileBertTokenizer
try:
if not is_tokenizers_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
from .tokenization_mobilebert_fast import MobileBertTokenizerFast
try:
if not is_torch_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
from .modeling_mobilebert import (
MOBILEBERT_PRETRAINED_MODEL_ARCHIVE_LIST,
MobileBertForMaskedLM,
MobileBertForMultipleChoice,
MobileBertForNextSentencePrediction,
MobileBertForPreTraining,
MobileBertForQuestionAnswering,
MobileBertForSequenceClassification,
MobileBertForTokenClassification,
MobileBertLayer,
MobileBertModel,
MobileBertPreTrainedModel,
load_tf_weights_in_mobilebert,
)
try:
if not is_tf_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
from .modeling_tf_mobilebert import (
TF_MOBILEBERT_PRETRAINED_MODEL_ARCHIVE_LIST,
TFMobileBertForMaskedLM,
TFMobileBertForMultipleChoice,
TFMobileBertForNextSentencePrediction,
TFMobileBertForPreTraining,
TFMobileBertForQuestionAnswering,
TFMobileBertForSequenceClassification,
TFMobileBertForTokenClassification,
TFMobileBertMainLayer,
TFMobileBertModel,
TFMobileBertPreTrainedModel,
)
else:
import sys
sys.modules[__name__] = _LazyModule(__name__, globals()["__file__"], _import_structure, module_spec=__spec__)
| 4,604 | 30.541096 | 113 | py |
transformers | transformers-main/src/transformers/models/mobilebert/modeling_mobilebert.py | # MIT License
#
# Copyright (c) 2020 The Google AI Language Team Authors, The HuggingFace Inc. team and github/lonePatient
#
# Permission is hereby granted, free of charge, to any person obtaining a copy
# of this software and associated documentation files (the "Software"), to deal
# in the Software without restriction, including without limitation the rights
# to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
# copies of the Software, and to permit persons to whom the Software is
# furnished to do so, subject to the following conditions:
#
# The above copyright notice and this permission notice shall be included in all
# copies or substantial portions of the Software.
#
# THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
# IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
# FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
# AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
# LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
# OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE
# SOFTWARE.
import math
import os
import warnings
from dataclasses import dataclass
from typing import Optional, Tuple, Union
import torch
from torch import nn
from torch.nn import BCEWithLogitsLoss, CrossEntropyLoss, MSELoss
from ...activations import ACT2FN
from ...modeling_outputs import (
BaseModelOutput,
BaseModelOutputWithPooling,
MaskedLMOutput,
MultipleChoiceModelOutput,
NextSentencePredictorOutput,
QuestionAnsweringModelOutput,
SequenceClassifierOutput,
TokenClassifierOutput,
)
from ...modeling_utils import PreTrainedModel
from ...pytorch_utils import find_pruneable_heads_and_indices, prune_linear_layer
from ...utils import (
ModelOutput,
add_code_sample_docstrings,
add_start_docstrings,
add_start_docstrings_to_model_forward,
logging,
replace_return_docstrings,
)
from .configuration_mobilebert import MobileBertConfig
logger = logging.get_logger(__name__)
_CHECKPOINT_FOR_DOC = "google/mobilebert-uncased"
_CONFIG_FOR_DOC = "MobileBertConfig"
# TokenClassification docstring
_CHECKPOINT_FOR_TOKEN_CLASSIFICATION = "mrm8488/mobilebert-finetuned-ner"
_TOKEN_CLASS_EXPECTED_OUTPUT = "['I-ORG', 'I-ORG', 'O', 'O', 'O', 'O', 'O', 'I-LOC', 'O', 'I-LOC', 'I-LOC']"
_TOKEN_CLASS_EXPECTED_LOSS = 0.03
# QuestionAnswering docstring
_CHECKPOINT_FOR_QA = "csarron/mobilebert-uncased-squad-v2"
_QA_EXPECTED_OUTPUT = "'a nice puppet'"
_QA_EXPECTED_LOSS = 3.98
_QA_TARGET_START_INDEX = 12
_QA_TARGET_END_INDEX = 13
# SequenceClassification docstring
_CHECKPOINT_FOR_SEQUENCE_CLASSIFICATION = "lordtt13/emo-mobilebert"
_SEQ_CLASS_EXPECTED_OUTPUT = "'others'"
_SEQ_CLASS_EXPECTED_LOSS = "4.72"
MOBILEBERT_PRETRAINED_MODEL_ARCHIVE_LIST = ["google/mobilebert-uncased"]
def load_tf_weights_in_mobilebert(model, config, tf_checkpoint_path):
"""Load tf checkpoints in a pytorch model."""
try:
import re
import numpy as np
import tensorflow as tf
except ImportError:
logger.error(
"Loading a TensorFlow model in PyTorch, requires TensorFlow to be installed. Please see "
"https://www.tensorflow.org/install/ for installation instructions."
)
raise
tf_path = os.path.abspath(tf_checkpoint_path)
logger.info(f"Converting TensorFlow checkpoint from {tf_path}")
# Load weights from TF model
init_vars = tf.train.list_variables(tf_path)
names = []
arrays = []
for name, shape in init_vars:
logger.info(f"Loading TF weight {name} with shape {shape}")
array = tf.train.load_variable(tf_path, name)
names.append(name)
arrays.append(array)
for name, array in zip(names, arrays):
name = name.replace("ffn_layer", "ffn")
name = name.replace("FakeLayerNorm", "LayerNorm")
name = name.replace("extra_output_weights", "dense/kernel")
name = name.replace("bert", "mobilebert")
name = name.split("/")
# adam_v and adam_m are variables used in AdamWeightDecayOptimizer to calculated m and v
# which are not required for using pretrained model
if any(
n in ["adam_v", "adam_m", "AdamWeightDecayOptimizer", "AdamWeightDecayOptimizer_1", "global_step"]
for n in name
):
logger.info(f"Skipping {'/'.join(name)}")
continue
pointer = model
for m_name in name:
if re.fullmatch(r"[A-Za-z]+_\d+", m_name):
scope_names = re.split(r"_(\d+)", m_name)
else:
scope_names = [m_name]
if scope_names[0] == "kernel" or scope_names[0] == "gamma":
pointer = getattr(pointer, "weight")
elif scope_names[0] == "output_bias" or scope_names[0] == "beta":
pointer = getattr(pointer, "bias")
elif scope_names[0] == "output_weights":
pointer = getattr(pointer, "weight")
elif scope_names[0] == "squad":
pointer = getattr(pointer, "classifier")
else:
try:
pointer = getattr(pointer, scope_names[0])
except AttributeError:
logger.info(f"Skipping {'/'.join(name)}")
continue
if len(scope_names) >= 2:
num = int(scope_names[1])
pointer = pointer[num]
if m_name[-11:] == "_embeddings":
pointer = getattr(pointer, "weight")
elif m_name == "kernel":
array = np.transpose(array)
try:
assert (
pointer.shape == array.shape
), f"Pointer shape {pointer.shape} and array shape {array.shape} mismatched"
except AssertionError as e:
e.args += (pointer.shape, array.shape)
raise
logger.info(f"Initialize PyTorch weight {name}")
pointer.data = torch.from_numpy(array)
return model
class NoNorm(nn.Module):
def __init__(self, feat_size, eps=None):
super().__init__()
self.bias = nn.Parameter(torch.zeros(feat_size))
self.weight = nn.Parameter(torch.ones(feat_size))
def forward(self, input_tensor: torch.Tensor) -> torch.Tensor:
return input_tensor * self.weight + self.bias
NORM2FN = {"layer_norm": nn.LayerNorm, "no_norm": NoNorm}
class MobileBertEmbeddings(nn.Module):
"""Construct the embeddings from word, position and token_type embeddings."""
def __init__(self, config):
super().__init__()
self.trigram_input = config.trigram_input
self.embedding_size = config.embedding_size
self.hidden_size = config.hidden_size
self.word_embeddings = nn.Embedding(config.vocab_size, config.embedding_size, padding_idx=config.pad_token_id)
self.position_embeddings = nn.Embedding(config.max_position_embeddings, config.hidden_size)
self.token_type_embeddings = nn.Embedding(config.type_vocab_size, config.hidden_size)
embed_dim_multiplier = 3 if self.trigram_input else 1
embedded_input_size = self.embedding_size * embed_dim_multiplier
self.embedding_transformation = nn.Linear(embedded_input_size, config.hidden_size)
self.LayerNorm = NORM2FN[config.normalization_type](config.hidden_size)
self.dropout = nn.Dropout(config.hidden_dropout_prob)
# position_ids (1, len position emb) is contiguous in memory and exported when serialized
self.register_buffer(
"position_ids", torch.arange(config.max_position_embeddings).expand((1, -1)), persistent=False
)
def forward(
self,
input_ids: Optional[torch.LongTensor] = None,
token_type_ids: Optional[torch.LongTensor] = None,
position_ids: Optional[torch.LongTensor] = None,
inputs_embeds: Optional[torch.FloatTensor] = None,
) -> torch.Tensor:
if input_ids is not None:
input_shape = input_ids.size()
else:
input_shape = inputs_embeds.size()[:-1]
seq_length = input_shape[1]
if position_ids is None:
position_ids = self.position_ids[:, :seq_length]
if token_type_ids is None:
token_type_ids = torch.zeros(input_shape, dtype=torch.long, device=self.position_ids.device)
if inputs_embeds is None:
inputs_embeds = self.word_embeddings(input_ids)
if self.trigram_input:
# From the paper MobileBERT: a Compact Task-Agnostic BERT for Resource-Limited
# Devices (https://arxiv.org/abs/2004.02984)
#
# The embedding table in BERT models accounts for a substantial proportion of model size. To compress
# the embedding layer, we reduce the embedding dimension to 128 in MobileBERT.
# Then, we apply a 1D convolution with kernel size 3 on the raw token embedding to produce a 512
# dimensional output.
inputs_embeds = torch.cat(
[
nn.functional.pad(inputs_embeds[:, 1:], [0, 0, 0, 1, 0, 0], value=0.0),
inputs_embeds,
nn.functional.pad(inputs_embeds[:, :-1], [0, 0, 1, 0, 0, 0], value=0.0),
],
dim=2,
)
if self.trigram_input or self.embedding_size != self.hidden_size:
inputs_embeds = self.embedding_transformation(inputs_embeds)
# Add positional embeddings and token type embeddings, then layer
# normalize and perform dropout.
position_embeddings = self.position_embeddings(position_ids)
token_type_embeddings = self.token_type_embeddings(token_type_ids)
embeddings = inputs_embeds + position_embeddings + token_type_embeddings
embeddings = self.LayerNorm(embeddings)
embeddings = self.dropout(embeddings)
return embeddings
class MobileBertSelfAttention(nn.Module):
def __init__(self, config):
super().__init__()
self.num_attention_heads = config.num_attention_heads
self.attention_head_size = int(config.true_hidden_size / config.num_attention_heads)
self.all_head_size = self.num_attention_heads * self.attention_head_size
self.query = nn.Linear(config.true_hidden_size, self.all_head_size)
self.key = nn.Linear(config.true_hidden_size, self.all_head_size)
self.value = nn.Linear(
config.true_hidden_size if config.use_bottleneck_attention else config.hidden_size, self.all_head_size
)
self.dropout = nn.Dropout(config.attention_probs_dropout_prob)
def transpose_for_scores(self, x):
new_x_shape = x.size()[:-1] + (self.num_attention_heads, self.attention_head_size)
x = x.view(new_x_shape)
return x.permute(0, 2, 1, 3)
def forward(
self,
query_tensor: torch.Tensor,
key_tensor: torch.Tensor,
value_tensor: torch.Tensor,
attention_mask: Optional[torch.FloatTensor] = None,
head_mask: Optional[torch.FloatTensor] = None,
output_attentions: Optional[bool] = None,
) -> Tuple[torch.Tensor]:
mixed_query_layer = self.query(query_tensor)
mixed_key_layer = self.key(key_tensor)
mixed_value_layer = self.value(value_tensor)
query_layer = self.transpose_for_scores(mixed_query_layer)
key_layer = self.transpose_for_scores(mixed_key_layer)
value_layer = self.transpose_for_scores(mixed_value_layer)
# Take the dot product between "query" and "key" to get the raw attention scores.
attention_scores = torch.matmul(query_layer, key_layer.transpose(-1, -2))
attention_scores = attention_scores / math.sqrt(self.attention_head_size)
if attention_mask is not None:
# Apply the attention mask is (precomputed for all layers in BertModel forward() function)
attention_scores = attention_scores + attention_mask
# Normalize the attention scores to probabilities.
attention_probs = nn.functional.softmax(attention_scores, dim=-1)
# This is actually dropping out entire tokens to attend to, which might
# seem a bit unusual, but is taken from the original Transformer paper.
attention_probs = self.dropout(attention_probs)
# Mask heads if we want to
if head_mask is not None:
attention_probs = attention_probs * head_mask
context_layer = torch.matmul(attention_probs, value_layer)
context_layer = context_layer.permute(0, 2, 1, 3).contiguous()
new_context_layer_shape = context_layer.size()[:-2] + (self.all_head_size,)
context_layer = context_layer.view(new_context_layer_shape)
outputs = (context_layer, attention_probs) if output_attentions else (context_layer,)
return outputs
class MobileBertSelfOutput(nn.Module):
def __init__(self, config):
super().__init__()
self.use_bottleneck = config.use_bottleneck
self.dense = nn.Linear(config.true_hidden_size, config.true_hidden_size)
self.LayerNorm = NORM2FN[config.normalization_type](config.true_hidden_size, eps=config.layer_norm_eps)
if not self.use_bottleneck:
self.dropout = nn.Dropout(config.hidden_dropout_prob)
def forward(self, hidden_states: torch.Tensor, residual_tensor: torch.Tensor) -> torch.Tensor:
layer_outputs = self.dense(hidden_states)
if not self.use_bottleneck:
layer_outputs = self.dropout(layer_outputs)
layer_outputs = self.LayerNorm(layer_outputs + residual_tensor)
return layer_outputs
class MobileBertAttention(nn.Module):
def __init__(self, config):
super().__init__()
self.self = MobileBertSelfAttention(config)
self.output = MobileBertSelfOutput(config)
self.pruned_heads = set()
def prune_heads(self, heads):
if len(heads) == 0:
return
heads, index = find_pruneable_heads_and_indices(
heads, self.self.num_attention_heads, self.self.attention_head_size, self.pruned_heads
)
# Prune linear layers
self.self.query = prune_linear_layer(self.self.query, index)
self.self.key = prune_linear_layer(self.self.key, index)
self.self.value = prune_linear_layer(self.self.value, index)
self.output.dense = prune_linear_layer(self.output.dense, index, dim=1)
# Update hyper params and store pruned heads
self.self.num_attention_heads = self.self.num_attention_heads - len(heads)
self.self.all_head_size = self.self.attention_head_size * self.self.num_attention_heads
self.pruned_heads = self.pruned_heads.union(heads)
def forward(
self,
query_tensor: torch.Tensor,
key_tensor: torch.Tensor,
value_tensor: torch.Tensor,
layer_input: torch.Tensor,
attention_mask: Optional[torch.FloatTensor] = None,
head_mask: Optional[torch.FloatTensor] = None,
output_attentions: Optional[bool] = None,
) -> Tuple[torch.Tensor]:
self_outputs = self.self(
query_tensor,
key_tensor,
value_tensor,
attention_mask,
head_mask,
output_attentions,
)
# Run a linear projection of `hidden_size` then add a residual
# with `layer_input`.
attention_output = self.output(self_outputs[0], layer_input)
outputs = (attention_output,) + self_outputs[1:] # add attentions if we output them
return outputs
class MobileBertIntermediate(nn.Module):
def __init__(self, config):
super().__init__()
self.dense = nn.Linear(config.true_hidden_size, config.intermediate_size)
if isinstance(config.hidden_act, str):
self.intermediate_act_fn = ACT2FN[config.hidden_act]
else:
self.intermediate_act_fn = config.hidden_act
def forward(self, hidden_states: torch.Tensor) -> torch.Tensor:
hidden_states = self.dense(hidden_states)
hidden_states = self.intermediate_act_fn(hidden_states)
return hidden_states
class OutputBottleneck(nn.Module):
def __init__(self, config):
super().__init__()
self.dense = nn.Linear(config.true_hidden_size, config.hidden_size)
self.LayerNorm = NORM2FN[config.normalization_type](config.hidden_size, eps=config.layer_norm_eps)
self.dropout = nn.Dropout(config.hidden_dropout_prob)
def forward(self, hidden_states: torch.Tensor, residual_tensor: torch.Tensor) -> torch.Tensor:
layer_outputs = self.dense(hidden_states)
layer_outputs = self.dropout(layer_outputs)
layer_outputs = self.LayerNorm(layer_outputs + residual_tensor)
return layer_outputs
class MobileBertOutput(nn.Module):
def __init__(self, config):
super().__init__()
self.use_bottleneck = config.use_bottleneck
self.dense = nn.Linear(config.intermediate_size, config.true_hidden_size)
self.LayerNorm = NORM2FN[config.normalization_type](config.true_hidden_size)
if not self.use_bottleneck:
self.dropout = nn.Dropout(config.hidden_dropout_prob)
else:
self.bottleneck = OutputBottleneck(config)
def forward(
self, intermediate_states: torch.Tensor, residual_tensor_1: torch.Tensor, residual_tensor_2: torch.Tensor
) -> torch.Tensor:
layer_output = self.dense(intermediate_states)
if not self.use_bottleneck:
layer_output = self.dropout(layer_output)
layer_output = self.LayerNorm(layer_output + residual_tensor_1)
else:
layer_output = self.LayerNorm(layer_output + residual_tensor_1)
layer_output = self.bottleneck(layer_output, residual_tensor_2)
return layer_output
class BottleneckLayer(nn.Module):
def __init__(self, config):
super().__init__()
self.dense = nn.Linear(config.hidden_size, config.intra_bottleneck_size)
self.LayerNorm = NORM2FN[config.normalization_type](config.intra_bottleneck_size, eps=config.layer_norm_eps)
def forward(self, hidden_states: torch.Tensor) -> torch.Tensor:
layer_input = self.dense(hidden_states)
layer_input = self.LayerNorm(layer_input)
return layer_input
class Bottleneck(nn.Module):
def __init__(self, config):
super().__init__()
self.key_query_shared_bottleneck = config.key_query_shared_bottleneck
self.use_bottleneck_attention = config.use_bottleneck_attention
self.input = BottleneckLayer(config)
if self.key_query_shared_bottleneck:
self.attention = BottleneckLayer(config)
def forward(self, hidden_states: torch.Tensor) -> Tuple[torch.Tensor]:
# This method can return three different tuples of values. These different values make use of bottlenecks,
# which are linear layers used to project the hidden states to a lower-dimensional vector, reducing memory
# usage. These linear layer have weights that are learned during training.
#
# If `config.use_bottleneck_attention`, it will return the result of the bottleneck layer four times for the
# key, query, value, and "layer input" to be used by the attention layer.
# This bottleneck is used to project the hidden. This last layer input will be used as a residual tensor
# in the attention self output, after the attention scores have been computed.
#
# If not `config.use_bottleneck_attention` and `config.key_query_shared_bottleneck`, this will return
# four values, three of which have been passed through a bottleneck: the query and key, passed through the same
# bottleneck, and the residual layer to be applied in the attention self output, through another bottleneck.
#
# Finally, in the last case, the values for the query, key and values are the hidden states without bottleneck,
# and the residual layer will be this value passed through a bottleneck.
bottlenecked_hidden_states = self.input(hidden_states)
if self.use_bottleneck_attention:
return (bottlenecked_hidden_states,) * 4
elif self.key_query_shared_bottleneck:
shared_attention_input = self.attention(hidden_states)
return (shared_attention_input, shared_attention_input, hidden_states, bottlenecked_hidden_states)
else:
return (hidden_states, hidden_states, hidden_states, bottlenecked_hidden_states)
class FFNOutput(nn.Module):
def __init__(self, config):
super().__init__()
self.dense = nn.Linear(config.intermediate_size, config.true_hidden_size)
self.LayerNorm = NORM2FN[config.normalization_type](config.true_hidden_size, eps=config.layer_norm_eps)
def forward(self, hidden_states: torch.Tensor, residual_tensor: torch.Tensor) -> torch.Tensor:
layer_outputs = self.dense(hidden_states)
layer_outputs = self.LayerNorm(layer_outputs + residual_tensor)
return layer_outputs
class FFNLayer(nn.Module):
def __init__(self, config):
super().__init__()
self.intermediate = MobileBertIntermediate(config)
self.output = FFNOutput(config)
def forward(self, hidden_states: torch.Tensor) -> torch.Tensor:
intermediate_output = self.intermediate(hidden_states)
layer_outputs = self.output(intermediate_output, hidden_states)
return layer_outputs
class MobileBertLayer(nn.Module):
def __init__(self, config):
super().__init__()
self.use_bottleneck = config.use_bottleneck
self.num_feedforward_networks = config.num_feedforward_networks
self.attention = MobileBertAttention(config)
self.intermediate = MobileBertIntermediate(config)
self.output = MobileBertOutput(config)
if self.use_bottleneck:
self.bottleneck = Bottleneck(config)
if config.num_feedforward_networks > 1:
self.ffn = nn.ModuleList([FFNLayer(config) for _ in range(config.num_feedforward_networks - 1)])
def forward(
self,
hidden_states: torch.Tensor,
attention_mask: Optional[torch.FloatTensor] = None,
head_mask: Optional[torch.FloatTensor] = None,
output_attentions: Optional[bool] = None,
) -> Tuple[torch.Tensor]:
if self.use_bottleneck:
query_tensor, key_tensor, value_tensor, layer_input = self.bottleneck(hidden_states)
else:
query_tensor, key_tensor, value_tensor, layer_input = [hidden_states] * 4
self_attention_outputs = self.attention(
query_tensor,
key_tensor,
value_tensor,
layer_input,
attention_mask,
head_mask,
output_attentions=output_attentions,
)
attention_output = self_attention_outputs[0]
s = (attention_output,)
outputs = self_attention_outputs[1:] # add self attentions if we output attention weights
if self.num_feedforward_networks != 1:
for i, ffn_module in enumerate(self.ffn):
attention_output = ffn_module(attention_output)
s += (attention_output,)
intermediate_output = self.intermediate(attention_output)
layer_output = self.output(intermediate_output, attention_output, hidden_states)
outputs = (
(layer_output,)
+ outputs
+ (
torch.tensor(1000),
query_tensor,
key_tensor,
value_tensor,
layer_input,
attention_output,
intermediate_output,
)
+ s
)
return outputs
class MobileBertEncoder(nn.Module):
def __init__(self, config):
super().__init__()
self.layer = nn.ModuleList([MobileBertLayer(config) for _ in range(config.num_hidden_layers)])
def forward(
self,
hidden_states: torch.Tensor,
attention_mask: Optional[torch.FloatTensor] = None,
head_mask: Optional[torch.FloatTensor] = None,
output_attentions: Optional[bool] = False,
output_hidden_states: Optional[bool] = False,
return_dict: Optional[bool] = True,
) -> Union[Tuple, BaseModelOutput]:
all_hidden_states = () if output_hidden_states else None
all_attentions = () if output_attentions else None
for i, layer_module in enumerate(self.layer):
if output_hidden_states:
all_hidden_states = all_hidden_states + (hidden_states,)
layer_outputs = layer_module(
hidden_states,
attention_mask,
head_mask[i],
output_attentions,
)
hidden_states = layer_outputs[0]
if output_attentions:
all_attentions = all_attentions + (layer_outputs[1],)
# Add last layer
if output_hidden_states:
all_hidden_states = all_hidden_states + (hidden_states,)
if not return_dict:
return tuple(v for v in [hidden_states, all_hidden_states, all_attentions] if v is not None)
return BaseModelOutput(
last_hidden_state=hidden_states, hidden_states=all_hidden_states, attentions=all_attentions
)
class MobileBertPooler(nn.Module):
def __init__(self, config):
super().__init__()
self.do_activate = config.classifier_activation
if self.do_activate:
self.dense = nn.Linear(config.hidden_size, config.hidden_size)
def forward(self, hidden_states: torch.Tensor) -> torch.Tensor:
# We "pool" the model by simply taking the hidden state corresponding
# to the first token.
first_token_tensor = hidden_states[:, 0]
if not self.do_activate:
return first_token_tensor
else:
pooled_output = self.dense(first_token_tensor)
pooled_output = torch.tanh(pooled_output)
return pooled_output
class MobileBertPredictionHeadTransform(nn.Module):
def __init__(self, config):
super().__init__()
self.dense = nn.Linear(config.hidden_size, config.hidden_size)
if isinstance(config.hidden_act, str):
self.transform_act_fn = ACT2FN[config.hidden_act]
else:
self.transform_act_fn = config.hidden_act
self.LayerNorm = NORM2FN["layer_norm"](config.hidden_size, eps=config.layer_norm_eps)
def forward(self, hidden_states: torch.Tensor) -> torch.Tensor:
hidden_states = self.dense(hidden_states)
hidden_states = self.transform_act_fn(hidden_states)
hidden_states = self.LayerNorm(hidden_states)
return hidden_states
class MobileBertLMPredictionHead(nn.Module):
def __init__(self, config):
super().__init__()
self.transform = MobileBertPredictionHeadTransform(config)
# The output weights are the same as the input embeddings, but there is
# an output-only bias for each token.
self.dense = nn.Linear(config.vocab_size, config.hidden_size - config.embedding_size, bias=False)
self.decoder = nn.Linear(config.embedding_size, config.vocab_size, bias=False)
self.bias = nn.Parameter(torch.zeros(config.vocab_size))
# Need a link between the two variables so that the bias is correctly resized with `resize_token_embeddings`
self.decoder.bias = self.bias
def forward(self, hidden_states: torch.Tensor) -> torch.Tensor:
hidden_states = self.transform(hidden_states)
hidden_states = hidden_states.matmul(torch.cat([self.decoder.weight.t(), self.dense.weight], dim=0))
hidden_states += self.decoder.bias
return hidden_states
class MobileBertOnlyMLMHead(nn.Module):
def __init__(self, config):
super().__init__()
self.predictions = MobileBertLMPredictionHead(config)
def forward(self, sequence_output: torch.Tensor) -> torch.Tensor:
prediction_scores = self.predictions(sequence_output)
return prediction_scores
class MobileBertPreTrainingHeads(nn.Module):
def __init__(self, config):
super().__init__()
self.predictions = MobileBertLMPredictionHead(config)
self.seq_relationship = nn.Linear(config.hidden_size, 2)
def forward(self, sequence_output: torch.Tensor, pooled_output: torch.Tensor) -> Tuple[torch.Tensor]:
prediction_scores = self.predictions(sequence_output)
seq_relationship_score = self.seq_relationship(pooled_output)
return prediction_scores, seq_relationship_score
class MobileBertPreTrainedModel(PreTrainedModel):
"""
An abstract class to handle weights initialization and a simple interface for downloading and loading pretrained
models.
"""
config_class = MobileBertConfig
pretrained_model_archive_map = MOBILEBERT_PRETRAINED_MODEL_ARCHIVE_LIST
load_tf_weights = load_tf_weights_in_mobilebert
base_model_prefix = "mobilebert"
def _init_weights(self, module):
"""Initialize the weights"""
if isinstance(module, nn.Linear):
# Slightly different from the TF version which uses truncated_normal for initialization
# cf https://github.com/pytorch/pytorch/pull/5617
module.weight.data.normal_(mean=0.0, std=self.config.initializer_range)
if module.bias is not None:
module.bias.data.zero_()
elif isinstance(module, nn.Embedding):
module.weight.data.normal_(mean=0.0, std=self.config.initializer_range)
if module.padding_idx is not None:
module.weight.data[module.padding_idx].zero_()
elif isinstance(module, (nn.LayerNorm, NoNorm)):
module.bias.data.zero_()
module.weight.data.fill_(1.0)
@dataclass
class MobileBertForPreTrainingOutput(ModelOutput):
"""
Output type of [`MobileBertForPreTraining`].
Args:
loss (*optional*, returned when `labels` is provided, `torch.FloatTensor` of shape `(1,)`):
Total loss as the sum of the masked language modeling loss and the next sequence prediction
(classification) loss.
prediction_logits (`torch.FloatTensor` of shape `(batch_size, sequence_length, config.vocab_size)`):
Prediction scores of the language modeling head (scores for each vocabulary token before SoftMax).
seq_relationship_logits (`torch.FloatTensor` of shape `(batch_size, 2)`):
Prediction scores of the next sequence prediction (classification) head (scores of True/False continuation
before SoftMax).
hidden_states (`tuple(torch.FloatTensor)`, *optional*, returned when `output_hidden_states=True` is passed or when `config.output_hidden_states=True`):
Tuple of `torch.FloatTensor` (one for the output of the embeddings + one for the output of each layer) of
shape `(batch_size, sequence_length, hidden_size)`.
Hidden-states of the model at the output of each layer plus the initial embedding outputs.
attentions (`tuple(torch.FloatTensor)`, *optional*, returned when `output_attentions=True` is passed or when `config.output_attentions=True`):
Tuple of `torch.FloatTensor` (one for each layer) of shape `(batch_size, num_heads, sequence_length,
sequence_length)`.
Attentions weights after the attention softmax, used to compute the weighted average in the self-attention
heads.
"""
loss: Optional[torch.FloatTensor] = None
prediction_logits: torch.FloatTensor = None
seq_relationship_logits: torch.FloatTensor = None
hidden_states: Optional[Tuple[torch.FloatTensor]] = None
attentions: Optional[Tuple[torch.FloatTensor]] = None
MOBILEBERT_START_DOCSTRING = r"""
This model inherits from [`PreTrainedModel`]. Check the superclass documentation for the generic methods the
library implements for all its model (such as downloading or saving, resizing the input embeddings, pruning heads
etc.)
This model is also a PyTorch [torch.nn.Module](https://pytorch.org/docs/stable/nn.html#torch.nn.Module) subclass.
Use it as a regular PyTorch Module and refer to the PyTorch documentation for all matter related to general usage
and behavior.
Parameters:
config ([`MobileBertConfig`]): Model configuration class with all the parameters of the model.
Initializing with a config file does not load the weights associated with the model, only the
configuration. Check out the [`~PreTrainedModel.from_pretrained`] method to load the model weights.
"""
MOBILEBERT_INPUTS_DOCSTRING = r"""
Args:
input_ids (`torch.LongTensor` of shape `({0})`):
Indices of input sequence tokens in the vocabulary.
Indices can be obtained using [`AutoTokenizer`]. See [`PreTrainedTokenizer.encode`] and
[`PreTrainedTokenizer.__call__`] for details.
[What are input IDs?](../glossary#input-ids)
attention_mask (`torch.FloatTensor` of shape `({0})`, *optional*):
Mask to avoid performing attention on padding token indices. Mask values selected in `[0, 1]`:
- 1 for tokens that are **not masked**,
- 0 for tokens that are **masked**.
[What are attention masks?](../glossary#attention-mask)
token_type_ids (`torch.LongTensor` of shape `({0})`, *optional*):
Segment token indices to indicate first and second portions of the inputs. Indices are selected in `[0,
1]`:
- 0 corresponds to a *sentence A* token,
- 1 corresponds to a *sentence B* token.
[What are token type IDs?](../glossary#token-type-ids)
position_ids (`torch.LongTensor` of shape `({0})`, *optional*):
Indices of positions of each input sequence tokens in the position embeddings. Selected in the range `[0,
config.max_position_embeddings - 1]`.
[What are position IDs?](../glossary#position-ids)
head_mask (`torch.FloatTensor` of shape `(num_heads,)` or `(num_layers, num_heads)`, *optional*):
Mask to nullify selected heads of the self-attention modules. Mask values selected in `[0, 1]`:
- 1 indicates the head is **not masked**,
- 0 indicates the head is **masked**.
inputs_embeds (`torch.FloatTensor` of shape `({0}, hidden_size)`, *optional*):
Optionally, instead of passing `input_ids` you can choose to directly pass an embedded representation. This
is useful if you want more control over how to convert `input_ids` indices into associated vectors than the
model's internal embedding lookup matrix.
output_attentions (`bool`, *optional*):
Whether or not to return the attentions tensors of all attention layers. See `attentions` under returned
tensors for more detail.
output_hidden_states (`bool`, *optional*):
Whether or not to return the hidden states of all layers. See `hidden_states` under returned tensors for
more detail.
return_dict (`bool`, *optional*):
Whether or not to return a [`~utils.ModelOutput`] instead of a plain tuple.
"""
@add_start_docstrings(
"The bare MobileBert Model transformer outputting raw hidden-states without any specific head on top.",
MOBILEBERT_START_DOCSTRING,
)
class MobileBertModel(MobileBertPreTrainedModel):
"""
https://arxiv.org/pdf/2004.02984.pdf
"""
def __init__(self, config, add_pooling_layer=True):
super().__init__(config)
self.config = config
self.embeddings = MobileBertEmbeddings(config)
self.encoder = MobileBertEncoder(config)
self.pooler = MobileBertPooler(config) if add_pooling_layer else None
# Initialize weights and apply final processing
self.post_init()
def get_input_embeddings(self):
return self.embeddings.word_embeddings
def set_input_embeddings(self, value):
self.embeddings.word_embeddings = value
def _prune_heads(self, heads_to_prune):
"""
Prunes heads of the model. heads_to_prune: dict of {layer_num: list of heads to prune in this layer} See base
class PreTrainedModel
"""
for layer, heads in heads_to_prune.items():
self.encoder.layer[layer].attention.prune_heads(heads)
@add_start_docstrings_to_model_forward(MOBILEBERT_INPUTS_DOCSTRING.format("batch_size, sequence_length"))
@add_code_sample_docstrings(
checkpoint=_CHECKPOINT_FOR_DOC,
output_type=BaseModelOutputWithPooling,
config_class=_CONFIG_FOR_DOC,
)
def forward(
self,
input_ids: Optional[torch.LongTensor] = None,
attention_mask: Optional[torch.FloatTensor] = None,
token_type_ids: Optional[torch.LongTensor] = None,
position_ids: Optional[torch.LongTensor] = None,
head_mask: Optional[torch.FloatTensor] = None,
inputs_embeds: Optional[torch.FloatTensor] = None,
output_hidden_states: Optional[bool] = None,
output_attentions: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[Tuple, BaseModelOutputWithPooling]:
output_attentions = output_attentions if output_attentions is not None else self.config.output_attentions
output_hidden_states = (
output_hidden_states if output_hidden_states is not None else self.config.output_hidden_states
)
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
if input_ids is not None and inputs_embeds is not None:
raise ValueError("You cannot specify both input_ids and inputs_embeds at the same time")
elif input_ids is not None:
input_shape = input_ids.size()
elif inputs_embeds is not None:
input_shape = inputs_embeds.size()[:-1]
else:
raise ValueError("You have to specify either input_ids or inputs_embeds")
device = input_ids.device if input_ids is not None else inputs_embeds.device
if attention_mask is None:
attention_mask = torch.ones(input_shape, device=device)
if token_type_ids is None:
token_type_ids = torch.zeros(input_shape, dtype=torch.long, device=device)
# We can provide a self-attention mask of dimensions [batch_size, from_seq_length, to_seq_length]
# ourselves in which case we just need to make it broadcastable to all heads.
extended_attention_mask: torch.Tensor = self.get_extended_attention_mask(attention_mask, input_shape)
# Prepare head mask if needed
# 1.0 in head_mask indicate we keep the head
# attention_probs has shape bsz x n_heads x N x N
# input head_mask has shape [num_heads] or [num_hidden_layers x num_heads]
# and head_mask is converted to shape [num_hidden_layers x batch x num_heads x seq_length x seq_length]
head_mask = self.get_head_mask(head_mask, self.config.num_hidden_layers)
embedding_output = self.embeddings(
input_ids=input_ids, position_ids=position_ids, token_type_ids=token_type_ids, inputs_embeds=inputs_embeds
)
encoder_outputs = self.encoder(
embedding_output,
attention_mask=extended_attention_mask,
head_mask=head_mask,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
sequence_output = encoder_outputs[0]
pooled_output = self.pooler(sequence_output) if self.pooler is not None else None
if not return_dict:
return (sequence_output, pooled_output) + encoder_outputs[1:]
return BaseModelOutputWithPooling(
last_hidden_state=sequence_output,
pooler_output=pooled_output,
hidden_states=encoder_outputs.hidden_states,
attentions=encoder_outputs.attentions,
)
@add_start_docstrings(
"""
MobileBert Model with two heads on top as done during the pretraining: a `masked language modeling` head and a
`next sentence prediction (classification)` head.
""",
MOBILEBERT_START_DOCSTRING,
)
class MobileBertForPreTraining(MobileBertPreTrainedModel):
_tied_weights_keys = ["cls.predictions.decoder.weight", "cls.predictions.decoder.bias"]
def __init__(self, config):
super().__init__(config)
self.mobilebert = MobileBertModel(config)
self.cls = MobileBertPreTrainingHeads(config)
# Initialize weights and apply final processing
self.post_init()
def get_output_embeddings(self):
return self.cls.predictions.decoder
def set_output_embeddings(self, new_embeddigs):
self.cls.predictions.decoder = new_embeddigs
def resize_token_embeddings(self, new_num_tokens: Optional[int] = None) -> nn.Embedding:
# resize dense output embedings at first
self.cls.predictions.dense = self._get_resized_lm_head(
self.cls.predictions.dense, new_num_tokens=new_num_tokens, transposed=True
)
return super().resize_token_embeddings(new_num_tokens=new_num_tokens)
@add_start_docstrings_to_model_forward(MOBILEBERT_INPUTS_DOCSTRING.format("batch_size, sequence_length"))
@replace_return_docstrings(output_type=MobileBertForPreTrainingOutput, config_class=_CONFIG_FOR_DOC)
def forward(
self,
input_ids: Optional[torch.LongTensor] = None,
attention_mask: Optional[torch.FloatTensor] = None,
token_type_ids: Optional[torch.LongTensor] = None,
position_ids: Optional[torch.LongTensor] = None,
head_mask: Optional[torch.FloatTensor] = None,
inputs_embeds: Optional[torch.FloatTensor] = None,
labels: Optional[torch.LongTensor] = None,
next_sentence_label: Optional[torch.LongTensor] = None,
output_attentions: Optional[torch.FloatTensor] = None,
output_hidden_states: Optional[torch.FloatTensor] = None,
return_dict: Optional[torch.FloatTensor] = None,
) -> Union[Tuple, MobileBertForPreTrainingOutput]:
r"""
labels (`torch.LongTensor` of shape `(batch_size, sequence_length)`, *optional*):
Labels for computing the masked language modeling loss. Indices should be in `[-100, 0, ...,
config.vocab_size]` (see `input_ids` docstring) Tokens with indices set to `-100` are ignored (masked), the
loss is only computed for the tokens with labels in `[0, ..., config.vocab_size]`
next_sentence_label (`torch.LongTensor` of shape `(batch_size,)`, *optional*):
Labels for computing the next sequence prediction (classification) loss. Input should be a sequence pair
(see `input_ids` docstring) Indices should be in `[0, 1]`:
- 0 indicates sequence B is a continuation of sequence A,
- 1 indicates sequence B is a random sequence.
Returns:
Examples:
```python
>>> from transformers import AutoTokenizer, MobileBertForPreTraining
>>> import torch
>>> tokenizer = AutoTokenizer.from_pretrained("google/mobilebert-uncased")
>>> model = MobileBertForPreTraining.from_pretrained("google/mobilebert-uncased")
>>> input_ids = torch.tensor(tokenizer.encode("Hello, my dog is cute", add_special_tokens=True)).unsqueeze(0)
>>> # Batch size 1
>>> outputs = model(input_ids)
>>> prediction_logits = outputs.prediction_logits
>>> seq_relationship_logits = outputs.seq_relationship_logits
```"""
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
outputs = self.mobilebert(
input_ids,
attention_mask=attention_mask,
token_type_ids=token_type_ids,
position_ids=position_ids,
head_mask=head_mask,
inputs_embeds=inputs_embeds,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
sequence_output, pooled_output = outputs[:2]
prediction_scores, seq_relationship_score = self.cls(sequence_output, pooled_output)
total_loss = None
if labels is not None and next_sentence_label is not None:
loss_fct = CrossEntropyLoss()
masked_lm_loss = loss_fct(prediction_scores.view(-1, self.config.vocab_size), labels.view(-1))
next_sentence_loss = loss_fct(seq_relationship_score.view(-1, 2), next_sentence_label.view(-1))
total_loss = masked_lm_loss + next_sentence_loss
if not return_dict:
output = (prediction_scores, seq_relationship_score) + outputs[2:]
return ((total_loss,) + output) if total_loss is not None else output
return MobileBertForPreTrainingOutput(
loss=total_loss,
prediction_logits=prediction_scores,
seq_relationship_logits=seq_relationship_score,
hidden_states=outputs.hidden_states,
attentions=outputs.attentions,
)
@add_start_docstrings("""MobileBert Model with a `language modeling` head on top.""", MOBILEBERT_START_DOCSTRING)
class MobileBertForMaskedLM(MobileBertPreTrainedModel):
_tied_weights_keys = ["cls.predictions.decoder.weight", "cls.predictions.decoder.bias"]
def __init__(self, config):
super().__init__(config)
self.mobilebert = MobileBertModel(config, add_pooling_layer=False)
self.cls = MobileBertOnlyMLMHead(config)
self.config = config
# Initialize weights and apply final processing
self.post_init()
def get_output_embeddings(self):
return self.cls.predictions.decoder
def set_output_embeddings(self, new_embeddigs):
self.cls.predictions.decoder = new_embeddigs
def resize_token_embeddings(self, new_num_tokens: Optional[int] = None) -> nn.Embedding:
# resize dense output embedings at first
self.cls.predictions.dense = self._get_resized_lm_head(
self.cls.predictions.dense, new_num_tokens=new_num_tokens, transposed=True
)
return super().resize_token_embeddings(new_num_tokens=new_num_tokens)
@add_start_docstrings_to_model_forward(MOBILEBERT_INPUTS_DOCSTRING.format("batch_size, sequence_length"))
@add_code_sample_docstrings(
checkpoint=_CHECKPOINT_FOR_DOC,
output_type=MaskedLMOutput,
config_class=_CONFIG_FOR_DOC,
expected_output="'paris'",
expected_loss=0.57,
)
def forward(
self,
input_ids: Optional[torch.LongTensor] = None,
attention_mask: Optional[torch.FloatTensor] = None,
token_type_ids: Optional[torch.LongTensor] = None,
position_ids: Optional[torch.LongTensor] = None,
head_mask: Optional[torch.FloatTensor] = None,
inputs_embeds: Optional[torch.FloatTensor] = None,
labels: Optional[torch.LongTensor] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[Tuple, MaskedLMOutput]:
r"""
labels (`torch.LongTensor` of shape `(batch_size, sequence_length)`, *optional*):
Labels for computing the masked language modeling loss. Indices should be in `[-100, 0, ...,
config.vocab_size]` (see `input_ids` docstring) Tokens with indices set to `-100` are ignored (masked), the
loss is only computed for the tokens with labels in `[0, ..., config.vocab_size]`
"""
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
outputs = self.mobilebert(
input_ids,
attention_mask=attention_mask,
token_type_ids=token_type_ids,
position_ids=position_ids,
head_mask=head_mask,
inputs_embeds=inputs_embeds,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
sequence_output = outputs[0]
prediction_scores = self.cls(sequence_output)
masked_lm_loss = None
if labels is not None:
loss_fct = CrossEntropyLoss() # -100 index = padding token
masked_lm_loss = loss_fct(prediction_scores.view(-1, self.config.vocab_size), labels.view(-1))
if not return_dict:
output = (prediction_scores,) + outputs[2:]
return ((masked_lm_loss,) + output) if masked_lm_loss is not None else output
return MaskedLMOutput(
loss=masked_lm_loss,
logits=prediction_scores,
hidden_states=outputs.hidden_states,
attentions=outputs.attentions,
)
class MobileBertOnlyNSPHead(nn.Module):
def __init__(self, config):
super().__init__()
self.seq_relationship = nn.Linear(config.hidden_size, 2)
def forward(self, pooled_output: torch.Tensor) -> torch.Tensor:
seq_relationship_score = self.seq_relationship(pooled_output)
return seq_relationship_score
@add_start_docstrings(
"""MobileBert Model with a `next sentence prediction (classification)` head on top.""",
MOBILEBERT_START_DOCSTRING,
)
class MobileBertForNextSentencePrediction(MobileBertPreTrainedModel):
def __init__(self, config):
super().__init__(config)
self.mobilebert = MobileBertModel(config)
self.cls = MobileBertOnlyNSPHead(config)
# Initialize weights and apply final processing
self.post_init()
@add_start_docstrings_to_model_forward(MOBILEBERT_INPUTS_DOCSTRING.format("batch_size, sequence_length"))
@replace_return_docstrings(output_type=NextSentencePredictorOutput, config_class=_CONFIG_FOR_DOC)
def forward(
self,
input_ids: Optional[torch.LongTensor] = None,
attention_mask: Optional[torch.FloatTensor] = None,
token_type_ids: Optional[torch.LongTensor] = None,
position_ids: Optional[torch.LongTensor] = None,
head_mask: Optional[torch.FloatTensor] = None,
inputs_embeds: Optional[torch.FloatTensor] = None,
labels: Optional[torch.LongTensor] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
**kwargs,
) -> Union[Tuple, NextSentencePredictorOutput]:
r"""
labels (`torch.LongTensor` of shape `(batch_size,)`, *optional*):
Labels for computing the next sequence prediction (classification) loss. Input should be a sequence pair
(see `input_ids` docstring) Indices should be in `[0, 1]`.
- 0 indicates sequence B is a continuation of sequence A,
- 1 indicates sequence B is a random sequence.
Returns:
Examples:
```python
>>> from transformers import AutoTokenizer, MobileBertForNextSentencePrediction
>>> import torch
>>> tokenizer = AutoTokenizer.from_pretrained("google/mobilebert-uncased")
>>> model = MobileBertForNextSentencePrediction.from_pretrained("google/mobilebert-uncased")
>>> prompt = "In Italy, pizza served in formal settings, such as at a restaurant, is presented unsliced."
>>> next_sentence = "The sky is blue due to the shorter wavelength of blue light."
>>> encoding = tokenizer(prompt, next_sentence, return_tensors="pt")
>>> outputs = model(**encoding, labels=torch.LongTensor([1]))
>>> loss = outputs.loss
>>> logits = outputs.logits
```"""
if "next_sentence_label" in kwargs:
warnings.warn(
"The `next_sentence_label` argument is deprecated and will be removed in a future version, use"
" `labels` instead.",
FutureWarning,
)
labels = kwargs.pop("next_sentence_label")
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
outputs = self.mobilebert(
input_ids,
attention_mask=attention_mask,
token_type_ids=token_type_ids,
position_ids=position_ids,
head_mask=head_mask,
inputs_embeds=inputs_embeds,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
pooled_output = outputs[1]
seq_relationship_score = self.cls(pooled_output)
next_sentence_loss = None
if labels is not None:
loss_fct = CrossEntropyLoss()
next_sentence_loss = loss_fct(seq_relationship_score.view(-1, 2), labels.view(-1))
if not return_dict:
output = (seq_relationship_score,) + outputs[2:]
return ((next_sentence_loss,) + output) if next_sentence_loss is not None else output
return NextSentencePredictorOutput(
loss=next_sentence_loss,
logits=seq_relationship_score,
hidden_states=outputs.hidden_states,
attentions=outputs.attentions,
)
@add_start_docstrings(
"""
MobileBert Model transformer with a sequence classification/regression head on top (a linear layer on top of the
pooled output) e.g. for GLUE tasks.
""",
MOBILEBERT_START_DOCSTRING,
)
# Copied from transformers.models.bert.modeling_bert.BertForSequenceClassification with Bert->MobileBert all-casing
class MobileBertForSequenceClassification(MobileBertPreTrainedModel):
def __init__(self, config):
super().__init__(config)
self.num_labels = config.num_labels
self.config = config
self.mobilebert = MobileBertModel(config)
classifier_dropout = (
config.classifier_dropout if config.classifier_dropout is not None else config.hidden_dropout_prob
)
self.dropout = nn.Dropout(classifier_dropout)
self.classifier = nn.Linear(config.hidden_size, config.num_labels)
# Initialize weights and apply final processing
self.post_init()
@add_start_docstrings_to_model_forward(MOBILEBERT_INPUTS_DOCSTRING.format("batch_size, sequence_length"))
@add_code_sample_docstrings(
checkpoint=_CHECKPOINT_FOR_SEQUENCE_CLASSIFICATION,
output_type=SequenceClassifierOutput,
config_class=_CONFIG_FOR_DOC,
expected_output=_SEQ_CLASS_EXPECTED_OUTPUT,
expected_loss=_SEQ_CLASS_EXPECTED_LOSS,
)
def forward(
self,
input_ids: Optional[torch.Tensor] = None,
attention_mask: Optional[torch.Tensor] = None,
token_type_ids: Optional[torch.Tensor] = None,
position_ids: Optional[torch.Tensor] = None,
head_mask: Optional[torch.Tensor] = None,
inputs_embeds: Optional[torch.Tensor] = None,
labels: Optional[torch.Tensor] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[Tuple[torch.Tensor], SequenceClassifierOutput]:
r"""
labels (`torch.LongTensor` of shape `(batch_size,)`, *optional*):
Labels for computing the sequence classification/regression loss. Indices should be in `[0, ...,
config.num_labels - 1]`. If `config.num_labels == 1` a regression loss is computed (Mean-Square loss), If
`config.num_labels > 1` a classification loss is computed (Cross-Entropy).
"""
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
outputs = self.mobilebert(
input_ids,
attention_mask=attention_mask,
token_type_ids=token_type_ids,
position_ids=position_ids,
head_mask=head_mask,
inputs_embeds=inputs_embeds,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
pooled_output = outputs[1]
pooled_output = self.dropout(pooled_output)
logits = self.classifier(pooled_output)
loss = None
if labels is not None:
if self.config.problem_type is None:
if self.num_labels == 1:
self.config.problem_type = "regression"
elif self.num_labels > 1 and (labels.dtype == torch.long or labels.dtype == torch.int):
self.config.problem_type = "single_label_classification"
else:
self.config.problem_type = "multi_label_classification"
if self.config.problem_type == "regression":
loss_fct = MSELoss()
if self.num_labels == 1:
loss = loss_fct(logits.squeeze(), labels.squeeze())
else:
loss = loss_fct(logits, labels)
elif self.config.problem_type == "single_label_classification":
loss_fct = CrossEntropyLoss()
loss = loss_fct(logits.view(-1, self.num_labels), labels.view(-1))
elif self.config.problem_type == "multi_label_classification":
loss_fct = BCEWithLogitsLoss()
loss = loss_fct(logits, labels)
if not return_dict:
output = (logits,) + outputs[2:]
return ((loss,) + output) if loss is not None else output
return SequenceClassifierOutput(
loss=loss,
logits=logits,
hidden_states=outputs.hidden_states,
attentions=outputs.attentions,
)
@add_start_docstrings(
"""
MobileBert Model with a span classification head on top for extractive question-answering tasks like SQuAD (a
linear layers on top of the hidden-states output to compute `span start logits` and `span end logits`).
""",
MOBILEBERT_START_DOCSTRING,
)
# Copied from transformers.models.bert.modeling_bert.BertForQuestionAnswering with Bert->MobileBert all-casing
class MobileBertForQuestionAnswering(MobileBertPreTrainedModel):
def __init__(self, config):
super().__init__(config)
self.num_labels = config.num_labels
self.mobilebert = MobileBertModel(config, add_pooling_layer=False)
self.qa_outputs = nn.Linear(config.hidden_size, config.num_labels)
# Initialize weights and apply final processing
self.post_init()
@add_start_docstrings_to_model_forward(MOBILEBERT_INPUTS_DOCSTRING.format("batch_size, sequence_length"))
@add_code_sample_docstrings(
checkpoint=_CHECKPOINT_FOR_QA,
output_type=QuestionAnsweringModelOutput,
config_class=_CONFIG_FOR_DOC,
qa_target_start_index=_QA_TARGET_START_INDEX,
qa_target_end_index=_QA_TARGET_END_INDEX,
expected_output=_QA_EXPECTED_OUTPUT,
expected_loss=_QA_EXPECTED_LOSS,
)
def forward(
self,
input_ids: Optional[torch.Tensor] = None,
attention_mask: Optional[torch.Tensor] = None,
token_type_ids: Optional[torch.Tensor] = None,
position_ids: Optional[torch.Tensor] = None,
head_mask: Optional[torch.Tensor] = None,
inputs_embeds: Optional[torch.Tensor] = None,
start_positions: Optional[torch.Tensor] = None,
end_positions: Optional[torch.Tensor] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[Tuple[torch.Tensor], QuestionAnsweringModelOutput]:
r"""
start_positions (`torch.LongTensor` of shape `(batch_size,)`, *optional*):
Labels for position (index) of the start of the labelled span for computing the token classification loss.
Positions are clamped to the length of the sequence (`sequence_length`). Position outside of the sequence
are not taken into account for computing the loss.
end_positions (`torch.LongTensor` of shape `(batch_size,)`, *optional*):
Labels for position (index) of the end of the labelled span for computing the token classification loss.
Positions are clamped to the length of the sequence (`sequence_length`). Position outside of the sequence
are not taken into account for computing the loss.
"""
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
outputs = self.mobilebert(
input_ids,
attention_mask=attention_mask,
token_type_ids=token_type_ids,
position_ids=position_ids,
head_mask=head_mask,
inputs_embeds=inputs_embeds,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
sequence_output = outputs[0]
logits = self.qa_outputs(sequence_output)
start_logits, end_logits = logits.split(1, dim=-1)
start_logits = start_logits.squeeze(-1).contiguous()
end_logits = end_logits.squeeze(-1).contiguous()
total_loss = None
if start_positions is not None and end_positions is not None:
# If we are on multi-GPU, split add a dimension
if len(start_positions.size()) > 1:
start_positions = start_positions.squeeze(-1)
if len(end_positions.size()) > 1:
end_positions = end_positions.squeeze(-1)
# sometimes the start/end positions are outside our model inputs, we ignore these terms
ignored_index = start_logits.size(1)
start_positions = start_positions.clamp(0, ignored_index)
end_positions = end_positions.clamp(0, ignored_index)
loss_fct = CrossEntropyLoss(ignore_index=ignored_index)
start_loss = loss_fct(start_logits, start_positions)
end_loss = loss_fct(end_logits, end_positions)
total_loss = (start_loss + end_loss) / 2
if not return_dict:
output = (start_logits, end_logits) + outputs[2:]
return ((total_loss,) + output) if total_loss is not None else output
return QuestionAnsweringModelOutput(
loss=total_loss,
start_logits=start_logits,
end_logits=end_logits,
hidden_states=outputs.hidden_states,
attentions=outputs.attentions,
)
@add_start_docstrings(
"""
MobileBert Model with a multiple choice classification head on top (a linear layer on top of the pooled output and
a softmax) e.g. for RocStories/SWAG tasks.
""",
MOBILEBERT_START_DOCSTRING,
)
# Copied from transformers.models.bert.modeling_bert.BertForMultipleChoice with Bert->MobileBert all-casing
class MobileBertForMultipleChoice(MobileBertPreTrainedModel):
def __init__(self, config):
super().__init__(config)
self.mobilebert = MobileBertModel(config)
classifier_dropout = (
config.classifier_dropout if config.classifier_dropout is not None else config.hidden_dropout_prob
)
self.dropout = nn.Dropout(classifier_dropout)
self.classifier = nn.Linear(config.hidden_size, 1)
# Initialize weights and apply final processing
self.post_init()
@add_start_docstrings_to_model_forward(
MOBILEBERT_INPUTS_DOCSTRING.format("batch_size, num_choices, sequence_length")
)
@add_code_sample_docstrings(
checkpoint=_CHECKPOINT_FOR_DOC,
output_type=MultipleChoiceModelOutput,
config_class=_CONFIG_FOR_DOC,
)
def forward(
self,
input_ids: Optional[torch.Tensor] = None,
attention_mask: Optional[torch.Tensor] = None,
token_type_ids: Optional[torch.Tensor] = None,
position_ids: Optional[torch.Tensor] = None,
head_mask: Optional[torch.Tensor] = None,
inputs_embeds: Optional[torch.Tensor] = None,
labels: Optional[torch.Tensor] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[Tuple[torch.Tensor], MultipleChoiceModelOutput]:
r"""
labels (`torch.LongTensor` of shape `(batch_size,)`, *optional*):
Labels for computing the multiple choice classification loss. Indices should be in `[0, ...,
num_choices-1]` where `num_choices` is the size of the second dimension of the input tensors. (See
`input_ids` above)
"""
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
num_choices = input_ids.shape[1] if input_ids is not None else inputs_embeds.shape[1]
input_ids = input_ids.view(-1, input_ids.size(-1)) if input_ids is not None else None
attention_mask = attention_mask.view(-1, attention_mask.size(-1)) if attention_mask is not None else None
token_type_ids = token_type_ids.view(-1, token_type_ids.size(-1)) if token_type_ids is not None else None
position_ids = position_ids.view(-1, position_ids.size(-1)) if position_ids is not None else None
inputs_embeds = (
inputs_embeds.view(-1, inputs_embeds.size(-2), inputs_embeds.size(-1))
if inputs_embeds is not None
else None
)
outputs = self.mobilebert(
input_ids,
attention_mask=attention_mask,
token_type_ids=token_type_ids,
position_ids=position_ids,
head_mask=head_mask,
inputs_embeds=inputs_embeds,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
pooled_output = outputs[1]
pooled_output = self.dropout(pooled_output)
logits = self.classifier(pooled_output)
reshaped_logits = logits.view(-1, num_choices)
loss = None
if labels is not None:
loss_fct = CrossEntropyLoss()
loss = loss_fct(reshaped_logits, labels)
if not return_dict:
output = (reshaped_logits,) + outputs[2:]
return ((loss,) + output) if loss is not None else output
return MultipleChoiceModelOutput(
loss=loss,
logits=reshaped_logits,
hidden_states=outputs.hidden_states,
attentions=outputs.attentions,
)
@add_start_docstrings(
"""
MobileBert Model with a token classification head on top (a linear layer on top of the hidden-states output) e.g.
for Named-Entity-Recognition (NER) tasks.
""",
MOBILEBERT_START_DOCSTRING,
)
# Copied from transformers.models.bert.modeling_bert.BertForTokenClassification with Bert->MobileBert all-casing
class MobileBertForTokenClassification(MobileBertPreTrainedModel):
def __init__(self, config):
super().__init__(config)
self.num_labels = config.num_labels
self.mobilebert = MobileBertModel(config, add_pooling_layer=False)
classifier_dropout = (
config.classifier_dropout if config.classifier_dropout is not None else config.hidden_dropout_prob
)
self.dropout = nn.Dropout(classifier_dropout)
self.classifier = nn.Linear(config.hidden_size, config.num_labels)
# Initialize weights and apply final processing
self.post_init()
@add_start_docstrings_to_model_forward(MOBILEBERT_INPUTS_DOCSTRING.format("batch_size, sequence_length"))
@add_code_sample_docstrings(
checkpoint=_CHECKPOINT_FOR_TOKEN_CLASSIFICATION,
output_type=TokenClassifierOutput,
config_class=_CONFIG_FOR_DOC,
expected_output=_TOKEN_CLASS_EXPECTED_OUTPUT,
expected_loss=_TOKEN_CLASS_EXPECTED_LOSS,
)
def forward(
self,
input_ids: Optional[torch.Tensor] = None,
attention_mask: Optional[torch.Tensor] = None,
token_type_ids: Optional[torch.Tensor] = None,
position_ids: Optional[torch.Tensor] = None,
head_mask: Optional[torch.Tensor] = None,
inputs_embeds: Optional[torch.Tensor] = None,
labels: Optional[torch.Tensor] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[Tuple[torch.Tensor], TokenClassifierOutput]:
r"""
labels (`torch.LongTensor` of shape `(batch_size, sequence_length)`, *optional*):
Labels for computing the token classification loss. Indices should be in `[0, ..., config.num_labels - 1]`.
"""
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
outputs = self.mobilebert(
input_ids,
attention_mask=attention_mask,
token_type_ids=token_type_ids,
position_ids=position_ids,
head_mask=head_mask,
inputs_embeds=inputs_embeds,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
sequence_output = outputs[0]
sequence_output = self.dropout(sequence_output)
logits = self.classifier(sequence_output)
loss = None
if labels is not None:
loss_fct = CrossEntropyLoss()
loss = loss_fct(logits.view(-1, self.num_labels), labels.view(-1))
if not return_dict:
output = (logits,) + outputs[2:]
return ((loss,) + output) if loss is not None else output
return TokenClassifierOutput(
loss=loss,
logits=logits,
hidden_states=outputs.hidden_states,
attentions=outputs.attentions,
)
| 70,458 | 42.573902 | 159 | py |
transformers | transformers-main/src/transformers/models/nystromformer/convert_nystromformer_original_pytorch_checkpoint_to_pytorch.py | # coding=utf-8
# Copyright 2022 The HuggingFace Inc. team.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
"""Convert Nystromformer checkpoints from the original repository."""
import argparse
import torch
from transformers import NystromformerConfig, NystromformerForMaskedLM
def rename_key(orig_key):
if "model" in orig_key:
orig_key = orig_key.replace("model.", "")
if "norm1" in orig_key:
orig_key = orig_key.replace("norm1", "attention.output.LayerNorm")
if "norm2" in orig_key:
orig_key = orig_key.replace("norm2", "output.LayerNorm")
if "norm" in orig_key:
orig_key = orig_key.replace("norm", "LayerNorm")
if "transformer" in orig_key:
layer_num = orig_key.split(".")[0].split("_")[-1]
orig_key = orig_key.replace(f"transformer_{layer_num}", f"encoder.layer.{layer_num}")
if "mha.attn" in orig_key:
orig_key = orig_key.replace("mha.attn", "attention.self")
if "mha" in orig_key:
orig_key = orig_key.replace("mha", "attention")
if "W_q" in orig_key:
orig_key = orig_key.replace("W_q", "self.query")
if "W_k" in orig_key:
orig_key = orig_key.replace("W_k", "self.key")
if "W_v" in orig_key:
orig_key = orig_key.replace("W_v", "self.value")
if "ff1" in orig_key:
orig_key = orig_key.replace("ff1", "intermediate.dense")
if "ff2" in orig_key:
orig_key = orig_key.replace("ff2", "output.dense")
if "ff" in orig_key:
orig_key = orig_key.replace("ff", "output.dense")
if "mlm_class" in orig_key:
orig_key = orig_key.replace("mlm.mlm_class", "cls.predictions.decoder")
if "mlm" in orig_key:
orig_key = orig_key.replace("mlm", "cls.predictions.transform")
if "cls" not in orig_key:
orig_key = "nystromformer." + orig_key
return orig_key
def convert_checkpoint_helper(config, orig_state_dict):
for key in orig_state_dict.copy().keys():
val = orig_state_dict.pop(key)
if ("pooler" in key) or ("sen_class" in key) or ("conv.bias" in key):
continue
else:
orig_state_dict[rename_key(key)] = val
orig_state_dict["cls.predictions.bias"] = orig_state_dict["cls.predictions.decoder.bias"]
orig_state_dict["nystromformer.embeddings.position_ids"] = (
torch.arange(config.max_position_embeddings).expand((1, -1)) + 2
)
return orig_state_dict
def convert_nystromformer_checkpoint(checkpoint_path, nystromformer_config_file, pytorch_dump_path):
orig_state_dict = torch.load(checkpoint_path, map_location="cpu")["model_state_dict"]
config = NystromformerConfig.from_json_file(nystromformer_config_file)
model = NystromformerForMaskedLM(config)
new_state_dict = convert_checkpoint_helper(config, orig_state_dict)
model.load_state_dict(new_state_dict)
model.eval()
model.save_pretrained(pytorch_dump_path)
print(f"Checkpoint successfuly converted. Model saved at {pytorch_dump_path}")
if __name__ == "__main__":
parser = argparse.ArgumentParser()
# Required parameters
parser.add_argument(
"--pytorch_model_path", default=None, type=str, required=True, help="Path to Nystromformer pytorch checkpoint."
)
parser.add_argument(
"--config_file",
default=None,
type=str,
required=True,
help="The json file for Nystromformer model config.",
)
parser.add_argument(
"--pytorch_dump_path", default=None, type=str, required=True, help="Path to the output PyTorch model."
)
args = parser.parse_args()
convert_nystromformer_checkpoint(args.pytorch_model_path, args.config_file, args.pytorch_dump_path)
| 4,197 | 36.482143 | 119 | py |
transformers | transformers-main/src/transformers/models/nystromformer/modeling_nystromformer.py | # coding=utf-8
# Copyright 2022 UW-Madison The HuggingFace Inc. team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
""" PyTorch Nystromformer model."""
import math
from typing import Optional, Tuple, Union
import torch
import torch.utils.checkpoint
from torch import nn
from torch.nn import BCEWithLogitsLoss, CrossEntropyLoss, MSELoss
from ...activations import ACT2FN
from ...modeling_outputs import (
BaseModelOutputWithPastAndCrossAttentions,
MaskedLMOutput,
MultipleChoiceModelOutput,
QuestionAnsweringModelOutput,
SequenceClassifierOutput,
TokenClassifierOutput,
)
from ...modeling_utils import PreTrainedModel
from ...pytorch_utils import apply_chunking_to_forward, find_pruneable_heads_and_indices, prune_linear_layer
from ...utils import add_code_sample_docstrings, add_start_docstrings, add_start_docstrings_to_model_forward, logging
from .configuration_nystromformer import NystromformerConfig
logger = logging.get_logger(__name__)
_CHECKPOINT_FOR_DOC = "uw-madison/nystromformer-512"
_CONFIG_FOR_DOC = "NystromformerConfig"
NYSTROMFORMER_PRETRAINED_MODEL_ARCHIVE_LIST = [
"uw-madison/nystromformer-512",
# See all Nyströmformer models at https://huggingface.co/models?filter=nystromformer
]
class NystromformerEmbeddings(nn.Module):
"""Construct the embeddings from word, position and token_type embeddings."""
def __init__(self, config):
super().__init__()
self.word_embeddings = nn.Embedding(config.vocab_size, config.hidden_size, padding_idx=config.pad_token_id)
self.position_embeddings = nn.Embedding(config.max_position_embeddings + 2, config.hidden_size)
self.token_type_embeddings = nn.Embedding(config.type_vocab_size, config.hidden_size)
# self.LayerNorm is not snake-cased to stick with TensorFlow model variable name and be able to load
# any TensorFlow checkpoint file
self.LayerNorm = nn.LayerNorm(config.hidden_size, eps=config.layer_norm_eps)
self.dropout = nn.Dropout(config.hidden_dropout_prob)
# position_ids (1, len position emb) is contiguous in memory and exported when serialized
self.register_buffer(
"position_ids", torch.arange(config.max_position_embeddings).expand((1, -1)) + 2, persistent=False
)
self.position_embedding_type = getattr(config, "position_embedding_type", "absolute")
self.register_buffer(
"token_type_ids",
torch.zeros(self.position_ids.size(), dtype=torch.long, device=self.position_ids.device),
persistent=False,
)
def forward(self, input_ids=None, token_type_ids=None, position_ids=None, inputs_embeds=None):
if input_ids is not None:
input_shape = input_ids.size()
else:
input_shape = inputs_embeds.size()[:-1]
seq_length = input_shape[1]
if position_ids is None:
position_ids = self.position_ids[:, :seq_length]
# Setting the token_type_ids to the registered buffer in constructor where it is all zeros, which usually occurs
# when its auto-generated, registered buffer helps users when tracing the model without passing token_type_ids, solves
# issue #5664
if token_type_ids is None:
if hasattr(self, "token_type_ids"):
buffered_token_type_ids = self.token_type_ids[:, :seq_length]
buffered_token_type_ids_expanded = buffered_token_type_ids.expand(input_shape[0], seq_length)
token_type_ids = buffered_token_type_ids_expanded
else:
token_type_ids = torch.zeros(input_shape, dtype=torch.long, device=self.position_ids.device)
if inputs_embeds is None:
inputs_embeds = self.word_embeddings(input_ids)
token_type_embeddings = self.token_type_embeddings(token_type_ids)
embeddings = inputs_embeds + token_type_embeddings
if self.position_embedding_type == "absolute":
position_embeddings = self.position_embeddings(position_ids)
embeddings += position_embeddings
embeddings = self.LayerNorm(embeddings)
embeddings = self.dropout(embeddings)
return embeddings
class NystromformerSelfAttention(nn.Module):
def __init__(self, config, position_embedding_type=None):
super().__init__()
if config.hidden_size % config.num_attention_heads != 0 and not hasattr(config, "embedding_size"):
raise ValueError(
f"The hidden size ({config.hidden_size}) is not a multiple of the number of attention "
f"heads ({config.num_attention_heads})"
)
self.num_attention_heads = config.num_attention_heads
self.attention_head_size = int(config.hidden_size / config.num_attention_heads)
self.all_head_size = self.num_attention_heads * self.attention_head_size
self.num_landmarks = config.num_landmarks
self.seq_len = config.segment_means_seq_len
self.conv_kernel_size = config.conv_kernel_size
if config.inv_coeff_init_option:
self.init_option = config["inv_init_coeff_option"]
else:
self.init_option = "original"
self.query = nn.Linear(config.hidden_size, self.all_head_size)
self.key = nn.Linear(config.hidden_size, self.all_head_size)
self.value = nn.Linear(config.hidden_size, self.all_head_size)
self.dropout = nn.Dropout(config.attention_probs_dropout_prob)
self.position_embedding_type = position_embedding_type or getattr(
config, "position_embedding_type", "absolute"
)
if self.conv_kernel_size is not None:
self.conv = nn.Conv2d(
in_channels=self.num_attention_heads,
out_channels=self.num_attention_heads,
kernel_size=(self.conv_kernel_size, 1),
padding=(self.conv_kernel_size // 2, 0),
bias=False,
groups=self.num_attention_heads,
)
# Function to approximate Moore-Penrose inverse via the iterative method
def iterative_inv(self, mat, n_iter=6):
identity = torch.eye(mat.size(-1), device=mat.device)
key = mat
# The entries of key are positive and ||key||_{\infty} = 1 due to softmax
if self.init_option == "original":
# This original implementation is more conservative to compute coefficient of Z_0.
value = 1 / torch.max(torch.sum(key, dim=-2)) * key.transpose(-1, -2)
else:
# This is the exact coefficient computation, 1 / ||key||_1, of initialization of Z_0, leading to faster convergence.
value = 1 / torch.max(torch.sum(key, dim=-2), dim=-1).values[:, :, None, None] * key.transpose(-1, -2)
for _ in range(n_iter):
key_value = torch.matmul(key, value)
value = torch.matmul(
0.25 * value,
13 * identity
- torch.matmul(key_value, 15 * identity - torch.matmul(key_value, 7 * identity - key_value)),
)
return value
def transpose_for_scores(self, layer):
new_layer_shape = layer.size()[:-1] + (self.num_attention_heads, self.attention_head_size)
layer = layer.view(*new_layer_shape)
return layer.permute(0, 2, 1, 3)
def forward(self, hidden_states, attention_mask=None, output_attentions=False):
mixed_query_layer = self.query(hidden_states)
key_layer = self.transpose_for_scores(self.key(hidden_states))
value_layer = self.transpose_for_scores(self.value(hidden_states))
query_layer = self.transpose_for_scores(mixed_query_layer)
query_layer = query_layer / math.sqrt(math.sqrt(self.attention_head_size))
key_layer = key_layer / math.sqrt(math.sqrt(self.attention_head_size))
if self.num_landmarks == self.seq_len:
attention_scores = torch.matmul(query_layer, key_layer.transpose(-1, -2))
if attention_mask is not None:
# Apply the attention mask is (precomputed for all layers in NystromformerModel forward() function)
attention_scores = attention_scores + attention_mask
attention_probs = nn.functional.softmax(attention_scores, dim=-1)
context_layer = torch.matmul(attention_probs, value_layer)
else:
q_landmarks = query_layer.reshape(
-1,
self.num_attention_heads,
self.num_landmarks,
self.seq_len // self.num_landmarks,
self.attention_head_size,
).mean(dim=-2)
k_landmarks = key_layer.reshape(
-1,
self.num_attention_heads,
self.num_landmarks,
self.seq_len // self.num_landmarks,
self.attention_head_size,
).mean(dim=-2)
kernel_1 = torch.nn.functional.softmax(torch.matmul(query_layer, k_landmarks.transpose(-1, -2)), dim=-1)
kernel_2 = torch.nn.functional.softmax(torch.matmul(q_landmarks, k_landmarks.transpose(-1, -2)), dim=-1)
attention_scores = torch.matmul(q_landmarks, key_layer.transpose(-1, -2))
if attention_mask is not None:
# Apply the attention mask is (precomputed for all layers in NystromformerModel forward() function)
attention_scores = attention_scores + attention_mask
kernel_3 = nn.functional.softmax(attention_scores, dim=-1)
attention_probs = torch.matmul(kernel_1, self.iterative_inv(kernel_2))
new_value_layer = torch.matmul(kernel_3, value_layer)
context_layer = torch.matmul(attention_probs, new_value_layer)
if self.conv_kernel_size is not None:
context_layer += self.conv(value_layer)
context_layer = context_layer.permute(0, 2, 1, 3).contiguous()
new_context_layer_shape = context_layer.size()[:-2] + (self.all_head_size,)
context_layer = context_layer.view(*new_context_layer_shape)
outputs = (context_layer, attention_probs) if output_attentions else (context_layer,)
return outputs
# Copied from transformers.models.bert.modeling_bert.BertSelfOutput
class NystromformerSelfOutput(nn.Module):
def __init__(self, config):
super().__init__()
self.dense = nn.Linear(config.hidden_size, config.hidden_size)
self.LayerNorm = nn.LayerNorm(config.hidden_size, eps=config.layer_norm_eps)
self.dropout = nn.Dropout(config.hidden_dropout_prob)
def forward(self, hidden_states: torch.Tensor, input_tensor: torch.Tensor) -> torch.Tensor:
hidden_states = self.dense(hidden_states)
hidden_states = self.dropout(hidden_states)
hidden_states = self.LayerNorm(hidden_states + input_tensor)
return hidden_states
class NystromformerAttention(nn.Module):
def __init__(self, config, position_embedding_type=None):
super().__init__()
self.self = NystromformerSelfAttention(config, position_embedding_type=position_embedding_type)
self.output = NystromformerSelfOutput(config)
self.pruned_heads = set()
def prune_heads(self, heads):
if len(heads) == 0:
return
heads, index = find_pruneable_heads_and_indices(
heads, self.self.num_attention_heads, self.self.attention_head_size, self.pruned_heads
)
# Prune linear layers
self.self.query = prune_linear_layer(self.self.query, index)
self.self.key = prune_linear_layer(self.self.key, index)
self.self.value = prune_linear_layer(self.self.value, index)
self.output.dense = prune_linear_layer(self.output.dense, index, dim=1)
# Update hyper params and store pruned heads
self.self.num_attention_heads = self.self.num_attention_heads - len(heads)
self.self.all_head_size = self.self.attention_head_size * self.self.num_attention_heads
self.pruned_heads = self.pruned_heads.union(heads)
def forward(self, hidden_states, attention_mask=None, output_attentions=False):
self_outputs = self.self(hidden_states, attention_mask, output_attentions)
attention_output = self.output(self_outputs[0], hidden_states)
outputs = (attention_output,) + self_outputs[1:] # add attentions if we output them
return outputs
# Copied from transformers.models.bert.modeling_bert.BertIntermediate with Bert->Nystromformer
class NystromformerIntermediate(nn.Module):
def __init__(self, config):
super().__init__()
self.dense = nn.Linear(config.hidden_size, config.intermediate_size)
if isinstance(config.hidden_act, str):
self.intermediate_act_fn = ACT2FN[config.hidden_act]
else:
self.intermediate_act_fn = config.hidden_act
def forward(self, hidden_states: torch.Tensor) -> torch.Tensor:
hidden_states = self.dense(hidden_states)
hidden_states = self.intermediate_act_fn(hidden_states)
return hidden_states
# Copied from transformers.models.bert.modeling_bert.BertOutput with Bert->Nystromformer
class NystromformerOutput(nn.Module):
def __init__(self, config):
super().__init__()
self.dense = nn.Linear(config.intermediate_size, config.hidden_size)
self.LayerNorm = nn.LayerNorm(config.hidden_size, eps=config.layer_norm_eps)
self.dropout = nn.Dropout(config.hidden_dropout_prob)
def forward(self, hidden_states: torch.Tensor, input_tensor: torch.Tensor) -> torch.Tensor:
hidden_states = self.dense(hidden_states)
hidden_states = self.dropout(hidden_states)
hidden_states = self.LayerNorm(hidden_states + input_tensor)
return hidden_states
class NystromformerLayer(nn.Module):
def __init__(self, config):
super().__init__()
self.chunk_size_feed_forward = config.chunk_size_feed_forward
self.seq_len_dim = 1
self.attention = NystromformerAttention(config)
self.add_cross_attention = config.add_cross_attention
self.intermediate = NystromformerIntermediate(config)
self.output = NystromformerOutput(config)
def forward(self, hidden_states, attention_mask=None, output_attentions=False):
self_attention_outputs = self.attention(hidden_states, attention_mask, output_attentions=output_attentions)
attention_output = self_attention_outputs[0]
outputs = self_attention_outputs[1:] # add self attentions if we output attention weights
layer_output = apply_chunking_to_forward(
self.feed_forward_chunk, self.chunk_size_feed_forward, self.seq_len_dim, attention_output
)
outputs = (layer_output,) + outputs
return outputs
def feed_forward_chunk(self, attention_output):
intermediate_output = self.intermediate(attention_output)
layer_output = self.output(intermediate_output, attention_output)
return layer_output
class NystromformerEncoder(nn.Module):
def __init__(self, config):
super().__init__()
self.config = config
self.layer = nn.ModuleList([NystromformerLayer(config) for _ in range(config.num_hidden_layers)])
self.gradient_checkpointing = False
def forward(
self,
hidden_states: torch.Tensor,
attention_mask: Optional[torch.Tensor] = None,
head_mask: Optional[torch.Tensor] = None,
output_attentions: bool = False,
output_hidden_states: bool = False,
return_dict: bool = True,
):
all_hidden_states = () if output_hidden_states else None
all_self_attentions = () if output_attentions else None
for i, layer_module in enumerate(self.layer):
if output_hidden_states:
all_hidden_states = all_hidden_states + (hidden_states,)
if self.gradient_checkpointing and self.training:
def create_custom_forward(module):
def custom_forward(*inputs):
return module(*inputs, output_attentions)
return custom_forward
layer_outputs = torch.utils.checkpoint.checkpoint(
create_custom_forward(layer_module),
hidden_states,
attention_mask,
)
else:
layer_outputs = layer_module(hidden_states, attention_mask, output_attentions)
hidden_states = layer_outputs[0]
if output_attentions:
all_self_attentions = all_self_attentions + (layer_outputs[1],)
if output_hidden_states:
all_hidden_states = all_hidden_states + (hidden_states,)
if not return_dict:
return tuple(v for v in [hidden_states, all_hidden_states, all_self_attentions] if v is not None)
return BaseModelOutputWithPastAndCrossAttentions(
last_hidden_state=hidden_states,
hidden_states=all_hidden_states,
attentions=all_self_attentions,
)
# Copied from transformers.models.bert.modeling_bert.BertPredictionHeadTransform with Bert->Nystromformer
class NystromformerPredictionHeadTransform(nn.Module):
def __init__(self, config):
super().__init__()
self.dense = nn.Linear(config.hidden_size, config.hidden_size)
if isinstance(config.hidden_act, str):
self.transform_act_fn = ACT2FN[config.hidden_act]
else:
self.transform_act_fn = config.hidden_act
self.LayerNorm = nn.LayerNorm(config.hidden_size, eps=config.layer_norm_eps)
def forward(self, hidden_states: torch.Tensor) -> torch.Tensor:
hidden_states = self.dense(hidden_states)
hidden_states = self.transform_act_fn(hidden_states)
hidden_states = self.LayerNorm(hidden_states)
return hidden_states
# Copied from transformers.models.bert.modeling_bert.BertLMPredictionHead with Bert->Nystromformer
class NystromformerLMPredictionHead(nn.Module):
def __init__(self, config):
super().__init__()
self.transform = NystromformerPredictionHeadTransform(config)
# The output weights are the same as the input embeddings, but there is
# an output-only bias for each token.
self.decoder = nn.Linear(config.hidden_size, config.vocab_size, bias=False)
self.bias = nn.Parameter(torch.zeros(config.vocab_size))
# Need a link between the two variables so that the bias is correctly resized with `resize_token_embeddings`
self.decoder.bias = self.bias
def forward(self, hidden_states):
hidden_states = self.transform(hidden_states)
hidden_states = self.decoder(hidden_states)
return hidden_states
# Copied from transformers.models.bert.modeling_bert.BertOnlyMLMHead with Bert->Nystromformer
class NystromformerOnlyMLMHead(nn.Module):
def __init__(self, config):
super().__init__()
self.predictions = NystromformerLMPredictionHead(config)
def forward(self, sequence_output: torch.Tensor) -> torch.Tensor:
prediction_scores = self.predictions(sequence_output)
return prediction_scores
class NystromformerPreTrainedModel(PreTrainedModel):
"""
An abstract class to handle weights initialization and a simple interface for downloading and loading pretrained
models.
"""
config_class = NystromformerConfig
base_model_prefix = "nystromformer"
supports_gradient_checkpointing = True
def _init_weights(self, module):
"""Initialize the weights"""
if isinstance(module, (nn.Linear, nn.Conv2d)):
# Slightly different from the TF version which uses truncated_normal for initialization
# cf https://github.com/pytorch/pytorch/pull/5617
module.weight.data.normal_(mean=0.0, std=self.config.initializer_range)
if module.bias is not None:
module.bias.data.zero_()
elif isinstance(module, nn.Embedding):
module.weight.data.normal_(mean=0.0, std=self.config.initializer_range)
if module.padding_idx is not None:
module.weight.data[module.padding_idx].zero_()
elif isinstance(module, nn.LayerNorm):
module.bias.data.zero_()
module.weight.data.fill_(1.0)
def _set_gradient_checkpointing(self, module, value=False):
if isinstance(module, NystromformerEncoder):
module.gradient_checkpointing = value
NYSTROMFORMER_START_DOCSTRING = r"""
This model is a PyTorch [torch.nn.Module](https://pytorch.org/docs/stable/nn.html#torch.nn.Module) sub-class. Use
it as a regular PyTorch Module and refer to the PyTorch documentation for all matter related to general usage and
behavior.
Parameters:
config ([`NystromformerConfig`]): Model configuration class with all the parameters of the model.
Initializing with a config file does not load the weights associated with the model, only the
configuration. Check out the [`~PreTrainedModel.from_pretrained`] method to load the model weights.
"""
NYSTROMFORMER_INPUTS_DOCSTRING = r"""
Args:
input_ids (`torch.LongTensor` of shape `({0})`):
Indices of input sequence tokens in the vocabulary.
Indices can be obtained using [`AutoTokenizer`]. See [`PreTrainedTokenizer.encode`] and
[`PreTrainedTokenizer.__call__`] for details.
[What are input IDs?](../glossary#input-ids)
attention_mask (`torch.FloatTensor` of shape `({0})`, *optional*):
Mask to avoid performing attention on padding token indices. Mask values selected in `[0, 1]`:
- 1 for tokens that are **not masked**,
- 0 for tokens that are **masked**.
[What are attention masks?](../glossary#attention-mask)
token_type_ids (`torch.LongTensor` of shape `({0})`, *optional*):
Segment token indices to indicate first and second portions of the inputs. Indices are selected in `[0,
1]`:
- 0 corresponds to a *sentence A* token,
- 1 corresponds to a *sentence B* token.
[What are token type IDs?](../glossary#token-type-ids)
position_ids (`torch.LongTensor` of shape `({0})`, *optional*):
Indices of positions of each input sequence tokens in the position embeddings. Selected in the range `[0,
config.max_position_embeddings - 1]`.
[What are position IDs?](../glossary#position-ids)
head_mask (`torch.FloatTensor` of shape `(num_heads,)` or `(num_layers, num_heads)`, *optional*):
Mask to nullify selected heads of the self-attention modules. Mask values selected in `[0, 1]`:
- 1 indicates the head is **not masked**,
- 0 indicates the head is **masked**.
inputs_embeds (`torch.FloatTensor` of shape `({0}, hidden_size)`, *optional*):
Optionally, instead of passing `input_ids` you can choose to directly pass an embedded representation. This
is useful if you want more control over how to convert *input_ids* indices into associated vectors than the
model's internal embedding lookup matrix.
output_attentions (`bool`, *optional*):
Whether or not to return the attentions tensors of all attention layers. See `attentions` under returned
tensors for more detail.
output_hidden_states (`bool`, *optional*):
Whether or not to return the hidden states of all layers. See `hidden_states` under returned tensors for
more detail.
return_dict (`bool`, *optional*):
Whether or not to return a [`~utils.ModelOutput`] instead of a plain tuple.
"""
@add_start_docstrings(
"The bare Nyströmformer Model transformer outputting raw hidden-states without any specific head on top.",
NYSTROMFORMER_START_DOCSTRING,
)
class NystromformerModel(NystromformerPreTrainedModel):
def __init__(self, config):
super().__init__(config)
self.config = config
self.embeddings = NystromformerEmbeddings(config)
self.encoder = NystromformerEncoder(config)
# Initialize weights and apply final processing
self.post_init()
def get_input_embeddings(self):
return self.embeddings.word_embeddings
def set_input_embeddings(self, value):
self.embeddings.word_embeddings = value
def _prune_heads(self, heads_to_prune):
"""
Prunes heads of the model. heads_to_prune: dict of {layer_num: list of heads to prune in this layer} See base
class PreTrainedModel
"""
for layer, heads in heads_to_prune.items():
self.encoder.layer[layer].attention.prune_heads(heads)
@add_start_docstrings_to_model_forward(NYSTROMFORMER_INPUTS_DOCSTRING.format("batch_size, sequence_length"))
@add_code_sample_docstrings(
checkpoint=_CHECKPOINT_FOR_DOC,
output_type=BaseModelOutputWithPastAndCrossAttentions,
config_class=_CONFIG_FOR_DOC,
)
def forward(
self,
input_ids: Optional[torch.LongTensor] = None,
attention_mask: Optional[torch.FloatTensor] = None,
token_type_ids: Optional[torch.LongTensor] = None,
position_ids: Optional[torch.LongTensor] = None,
head_mask: Optional[torch.FloatTensor] = None,
inputs_embeds: Optional[torch.FloatTensor] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[Tuple[torch.Tensor], BaseModelOutputWithPastAndCrossAttentions]:
output_attentions = output_attentions if output_attentions is not None else self.config.output_attentions
output_hidden_states = (
output_hidden_states if output_hidden_states is not None else self.config.output_hidden_states
)
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
if input_ids is not None and inputs_embeds is not None:
raise ValueError("You cannot specify both input_ids and inputs_embeds at the same time")
elif input_ids is not None:
input_shape = input_ids.size()
elif inputs_embeds is not None:
input_shape = inputs_embeds.size()[:-1]
else:
raise ValueError("You have to specify either input_ids or inputs_embeds")
batch_size, seq_length = input_shape
device = input_ids.device if input_ids is not None else inputs_embeds.device
if attention_mask is None:
attention_mask = torch.ones(((batch_size, seq_length)), device=device)
if token_type_ids is None:
if hasattr(self.embeddings, "token_type_ids"):
buffered_token_type_ids = self.embeddings.token_type_ids[:, :seq_length]
buffered_token_type_ids_expanded = buffered_token_type_ids.expand(batch_size, seq_length)
token_type_ids = buffered_token_type_ids_expanded
else:
token_type_ids = torch.zeros(input_shape, dtype=torch.long, device=device)
# We can provide a self-attention mask of dimensions [batch_size, from_seq_length, to_seq_length]
# ourselves in which case we just need to make it broadcastable to all heads.
extended_attention_mask: torch.Tensor = self.get_extended_attention_mask(attention_mask, input_shape)
# Prepare head mask if needed
# 1.0 in head_mask indicate we keep the head
# attention_probs has shape bsz x n_heads x N x N
# input head_mask has shape [num_heads] or [num_hidden_layers x num_heads]
# and head_mask is converted to shape [num_hidden_layers x batch x num_heads x seq_length x seq_length]
head_mask = self.get_head_mask(head_mask, self.config.num_hidden_layers)
embedding_output = self.embeddings(
input_ids=input_ids,
position_ids=position_ids,
token_type_ids=token_type_ids,
inputs_embeds=inputs_embeds,
)
encoder_outputs = self.encoder(
embedding_output,
attention_mask=extended_attention_mask,
head_mask=head_mask,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
sequence_output = encoder_outputs[0]
if not return_dict:
return (sequence_output,) + encoder_outputs[1:]
return BaseModelOutputWithPastAndCrossAttentions(
last_hidden_state=sequence_output,
hidden_states=encoder_outputs.hidden_states,
attentions=encoder_outputs.attentions,
cross_attentions=encoder_outputs.cross_attentions,
)
@add_start_docstrings("""Nyströmformer Model with a `language modeling` head on top.""", NYSTROMFORMER_START_DOCSTRING)
class NystromformerForMaskedLM(NystromformerPreTrainedModel):
_tied_weights_keys = ["cls.predictions.decoder"]
def __init__(self, config):
super().__init__(config)
self.nystromformer = NystromformerModel(config)
self.cls = NystromformerOnlyMLMHead(config)
# Initialize weights and apply final processing
self.post_init()
def get_output_embeddings(self):
return self.cls.predictions.decoder
def set_output_embeddings(self, new_embeddings):
self.cls.predictions.decoder = new_embeddings
@add_start_docstrings_to_model_forward(NYSTROMFORMER_INPUTS_DOCSTRING.format("batch_size, sequence_length"))
@add_code_sample_docstrings(
checkpoint=_CHECKPOINT_FOR_DOC,
output_type=MaskedLMOutput,
config_class=_CONFIG_FOR_DOC,
)
def forward(
self,
input_ids: Optional[torch.LongTensor] = None,
attention_mask: Optional[torch.FloatTensor] = None,
token_type_ids: Optional[torch.LongTensor] = None,
position_ids: Optional[torch.LongTensor] = None,
head_mask: Optional[torch.FloatTensor] = None,
inputs_embeds: Optional[torch.FloatTensor] = None,
labels: Optional[torch.LongTensor] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[Tuple[torch.Tensor], MaskedLMOutput]:
r"""
labels (`torch.LongTensor` of shape `(batch_size, sequence_length)`, *optional*):
Labels for computing the masked language modeling loss. Indices should be in `[-100, 0, ...,
config.vocab_size]` (see `input_ids` docstring) Tokens with indices set to `-100` are ignored (masked), the
loss is only computed for the tokens with labels in `[0, ..., config.vocab_size]`.
"""
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
outputs = self.nystromformer(
input_ids,
attention_mask=attention_mask,
token_type_ids=token_type_ids,
position_ids=position_ids,
head_mask=head_mask,
inputs_embeds=inputs_embeds,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
sequence_output = outputs[0]
prediction_scores = self.cls(sequence_output)
masked_lm_loss = None
if labels is not None:
loss_fct = CrossEntropyLoss() # -100 index = padding token
masked_lm_loss = loss_fct(prediction_scores.view(-1, self.config.vocab_size), labels.view(-1))
if not return_dict:
output = (prediction_scores,) + outputs[1:]
return ((masked_lm_loss,) + output) if masked_lm_loss is not None else output
return MaskedLMOutput(
loss=masked_lm_loss,
logits=prediction_scores,
hidden_states=outputs.hidden_states,
attentions=outputs.attentions,
)
class NystromformerClassificationHead(nn.Module):
"""Head for sentence-level classification tasks."""
def __init__(self, config):
super().__init__()
self.dense = nn.Linear(config.hidden_size, config.hidden_size)
self.dropout = nn.Dropout(config.hidden_dropout_prob)
self.out_proj = nn.Linear(config.hidden_size, config.num_labels)
self.config = config
def forward(self, features, **kwargs):
x = features[:, 0, :] # take <s> token (equiv. to [CLS])
x = self.dropout(x)
x = self.dense(x)
x = ACT2FN[self.config.hidden_act](x)
x = self.dropout(x)
x = self.out_proj(x)
return x
@add_start_docstrings(
"""
Nyströmformer Model transformer with a sequence classification/regression head on top (a linear layer on top of the
pooled output) e.g. for GLUE tasks.
""",
NYSTROMFORMER_START_DOCSTRING,
)
class NystromformerForSequenceClassification(NystromformerPreTrainedModel):
def __init__(self, config):
super().__init__(config)
self.num_labels = config.num_labels
self.nystromformer = NystromformerModel(config)
self.classifier = NystromformerClassificationHead(config)
# Initialize weights and apply final processing
self.post_init()
@add_start_docstrings_to_model_forward(NYSTROMFORMER_INPUTS_DOCSTRING.format("batch_size, sequence_length"))
@add_code_sample_docstrings(
checkpoint=_CHECKPOINT_FOR_DOC,
output_type=SequenceClassifierOutput,
config_class=_CONFIG_FOR_DOC,
)
def forward(
self,
input_ids: Optional[torch.LongTensor] = None,
attention_mask: Optional[torch.FloatTensor] = None,
token_type_ids: Optional[torch.LongTensor] = None,
position_ids: Optional[torch.LongTensor] = None,
head_mask: Optional[torch.FloatTensor] = None,
inputs_embeds: Optional[torch.FloatTensor] = None,
labels: Optional[torch.LongTensor] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[Tuple[torch.Tensor], SequenceClassifierOutput]:
r"""
labels (`torch.LongTensor` of shape `(batch_size,)`, *optional*):
Labels for computing the sequence classification/regression loss. Indices should be in `[0, ...,
config.num_labels - 1]`. If `config.num_labels == 1` a regression loss is computed (Mean-Square loss), If
`config.num_labels > 1` a classification loss is computed (Cross-Entropy).
"""
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
outputs = self.nystromformer(
input_ids,
attention_mask=attention_mask,
token_type_ids=token_type_ids,
position_ids=position_ids,
head_mask=head_mask,
inputs_embeds=inputs_embeds,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
sequence_output = outputs[0]
logits = self.classifier(sequence_output)
loss = None
if labels is not None:
if self.config.problem_type is None:
if self.num_labels == 1:
self.config.problem_type = "regression"
elif self.num_labels > 1 and (labels.dtype == torch.long or labels.dtype == torch.int):
self.config.problem_type = "single_label_classification"
else:
self.config.problem_type = "multi_label_classification"
if self.config.problem_type == "regression":
loss_fct = MSELoss()
if self.num_labels == 1:
loss = loss_fct(logits.squeeze(), labels.squeeze())
else:
loss = loss_fct(logits, labels)
elif self.config.problem_type == "single_label_classification":
loss_fct = CrossEntropyLoss()
loss = loss_fct(logits.view(-1, self.num_labels), labels.view(-1))
elif self.config.problem_type == "multi_label_classification":
loss_fct = BCEWithLogitsLoss()
loss = loss_fct(logits, labels)
if not return_dict:
output = (logits,) + outputs[1:]
return ((loss,) + output) if loss is not None else output
return SequenceClassifierOutput(
loss=loss,
logits=logits,
hidden_states=outputs.hidden_states,
attentions=outputs.attentions,
)
@add_start_docstrings(
"""
Nyströmformer Model with a multiple choice classification head on top (a linear layer on top of the pooled output
and a softmax) e.g. for RocStories/SWAG tasks.
""",
NYSTROMFORMER_START_DOCSTRING,
)
class NystromformerForMultipleChoice(NystromformerPreTrainedModel):
def __init__(self, config):
super().__init__(config)
self.nystromformer = NystromformerModel(config)
self.pre_classifier = nn.Linear(config.hidden_size, config.hidden_size)
self.classifier = nn.Linear(config.hidden_size, 1)
# Initialize weights and apply final processing
self.post_init()
@add_start_docstrings_to_model_forward(
NYSTROMFORMER_INPUTS_DOCSTRING.format("batch_size, num_choices, sequence_length")
)
@add_code_sample_docstrings(
checkpoint=_CHECKPOINT_FOR_DOC,
output_type=MultipleChoiceModelOutput,
config_class=_CONFIG_FOR_DOC,
)
def forward(
self,
input_ids: Optional[torch.LongTensor] = None,
attention_mask: Optional[torch.FloatTensor] = None,
token_type_ids: Optional[torch.LongTensor] = None,
position_ids: Optional[torch.LongTensor] = None,
head_mask: Optional[torch.FloatTensor] = None,
inputs_embeds: Optional[torch.FloatTensor] = None,
labels: Optional[torch.LongTensor] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[Tuple[torch.Tensor], MultipleChoiceModelOutput]:
r"""
labels (`torch.LongTensor` of shape `(batch_size,)`, *optional*):
Labels for computing the multiple choice classification loss. Indices should be in `[0, ...,
num_choices-1]` where `num_choices` is the size of the second dimension of the input tensors. (See
`input_ids` above)
"""
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
num_choices = input_ids.shape[1] if input_ids is not None else inputs_embeds.shape[1]
input_ids = input_ids.view(-1, input_ids.size(-1)) if input_ids is not None else None
attention_mask = attention_mask.view(-1, attention_mask.size(-1)) if attention_mask is not None else None
token_type_ids = token_type_ids.view(-1, token_type_ids.size(-1)) if token_type_ids is not None else None
position_ids = position_ids.view(-1, position_ids.size(-1)) if position_ids is not None else None
inputs_embeds = (
inputs_embeds.view(-1, inputs_embeds.size(-2), inputs_embeds.size(-1))
if inputs_embeds is not None
else None
)
outputs = self.nystromformer(
input_ids,
attention_mask=attention_mask,
token_type_ids=token_type_ids,
position_ids=position_ids,
head_mask=head_mask,
inputs_embeds=inputs_embeds,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
hidden_state = outputs[0] # (bs * num_choices, seq_len, dim)
pooled_output = hidden_state[:, 0] # (bs * num_choices, dim)
pooled_output = self.pre_classifier(pooled_output) # (bs * num_choices, dim)
pooled_output = nn.ReLU()(pooled_output) # (bs * num_choices, dim)
logits = self.classifier(pooled_output)
reshaped_logits = logits.view(-1, num_choices)
loss = None
if labels is not None:
loss_fct = CrossEntropyLoss()
loss = loss_fct(reshaped_logits, labels)
if not return_dict:
output = (reshaped_logits,) + outputs[1:]
return ((loss,) + output) if loss is not None else output
return MultipleChoiceModelOutput(
loss=loss,
logits=reshaped_logits,
hidden_states=outputs.hidden_states,
attentions=outputs.attentions,
)
@add_start_docstrings(
"""
Nyströmformer Model with a token classification head on top (a linear layer on top of the hidden-states output)
e.g. for Named-Entity-Recognition (NER) tasks.
""",
NYSTROMFORMER_START_DOCSTRING,
)
class NystromformerForTokenClassification(NystromformerPreTrainedModel):
def __init__(self, config):
super().__init__(config)
self.num_labels = config.num_labels
self.nystromformer = NystromformerModel(config)
self.dropout = nn.Dropout(config.hidden_dropout_prob)
self.classifier = nn.Linear(config.hidden_size, config.num_labels)
# Initialize weights and apply final processing
self.post_init()
@add_start_docstrings_to_model_forward(NYSTROMFORMER_INPUTS_DOCSTRING.format("batch_size, sequence_length"))
@add_code_sample_docstrings(
checkpoint=_CHECKPOINT_FOR_DOC,
output_type=TokenClassifierOutput,
config_class=_CONFIG_FOR_DOC,
)
def forward(
self,
input_ids: Optional[torch.LongTensor] = None,
attention_mask: Optional[torch.FloatTensor] = None,
token_type_ids: Optional[torch.LongTensor] = None,
position_ids: Optional[torch.LongTensor] = None,
head_mask: Optional[torch.FloatTensor] = None,
inputs_embeds: Optional[torch.FloatTensor] = None,
labels: Optional[torch.LongTensor] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[Tuple[torch.Tensor], TokenClassifierOutput]:
r"""
labels (`torch.LongTensor` of shape `(batch_size, sequence_length)`, *optional*):
Labels for computing the token classification loss. Indices should be in `[0, ..., config.num_labels - 1]`.
"""
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
outputs = self.nystromformer(
input_ids,
attention_mask=attention_mask,
token_type_ids=token_type_ids,
position_ids=position_ids,
head_mask=head_mask,
inputs_embeds=inputs_embeds,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
sequence_output = outputs[0]
sequence_output = self.dropout(sequence_output)
logits = self.classifier(sequence_output)
loss = None
if labels is not None:
loss_fct = CrossEntropyLoss()
loss = loss_fct(logits.view(-1, self.num_labels), labels.view(-1))
if not return_dict:
output = (logits,) + outputs[1:]
return ((loss,) + output) if loss is not None else output
return TokenClassifierOutput(
loss=loss,
logits=logits,
hidden_states=outputs.hidden_states,
attentions=outputs.attentions,
)
@add_start_docstrings(
"""
Nyströmformer Model with a span classification head on top for extractive question-answering tasks like SQuAD (a
linear layers on top of the hidden-states output to compute `span start logits` and `span end logits`).
""",
NYSTROMFORMER_START_DOCSTRING,
)
class NystromformerForQuestionAnswering(NystromformerPreTrainedModel):
def __init__(self, config):
super().__init__(config)
config.num_labels = 2
self.num_labels = config.num_labels
self.nystromformer = NystromformerModel(config)
self.qa_outputs = nn.Linear(config.hidden_size, config.num_labels)
# Initialize weights and apply final processing
self.post_init()
@add_start_docstrings_to_model_forward(NYSTROMFORMER_INPUTS_DOCSTRING.format("batch_size, sequence_length"))
@add_code_sample_docstrings(
checkpoint=_CHECKPOINT_FOR_DOC,
output_type=QuestionAnsweringModelOutput,
config_class=_CONFIG_FOR_DOC,
)
def forward(
self,
input_ids: Optional[torch.LongTensor] = None,
attention_mask: Optional[torch.FloatTensor] = None,
token_type_ids: Optional[torch.LongTensor] = None,
position_ids: Optional[torch.LongTensor] = None,
head_mask: Optional[torch.FloatTensor] = None,
inputs_embeds: Optional[torch.FloatTensor] = None,
start_positions: Optional[torch.LongTensor] = None,
end_positions: Optional[torch.LongTensor] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[Tuple[torch.Tensor], QuestionAnsweringModelOutput]:
r"""
start_positions (`torch.LongTensor` of shape `(batch_size,)`, *optional*):
Labels for position (index) of the start of the labelled span for computing the token classification loss.
Positions are clamped to the length of the sequence (`sequence_length`). Position outside of the sequence
are not taken into account for computing the loss.
end_positions (`torch.LongTensor` of shape `(batch_size,)`, *optional*):
Labels for position (index) of the end of the labelled span for computing the token classification loss.
Positions are clamped to the length of the sequence (`sequence_length`). Position outside of the sequence
are not taken into account for computing the loss.
"""
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
outputs = self.nystromformer(
input_ids,
attention_mask=attention_mask,
token_type_ids=token_type_ids,
position_ids=position_ids,
head_mask=head_mask,
inputs_embeds=inputs_embeds,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
sequence_output = outputs[0]
logits = self.qa_outputs(sequence_output)
start_logits, end_logits = logits.split(1, dim=-1)
start_logits = start_logits.squeeze(-1)
end_logits = end_logits.squeeze(-1)
total_loss = None
if start_positions is not None and end_positions is not None:
# If we are on multi-GPU, split add a dimension
if len(start_positions.size()) > 1:
start_positions = start_positions.squeeze(-1)
if len(end_positions.size()) > 1:
end_positions = end_positions.squeeze(-1)
# sometimes the start/end positions are outside our model inputs, we ignore these terms
ignored_index = start_logits.size(1)
start_positions = start_positions.clamp(0, ignored_index)
end_positions = end_positions.clamp(0, ignored_index)
loss_fct = CrossEntropyLoss(ignore_index=ignored_index)
start_loss = loss_fct(start_logits, start_positions)
end_loss = loss_fct(end_logits, end_positions)
total_loss = (start_loss + end_loss) / 2
if not return_dict:
output = (start_logits, end_logits) + outputs[1:]
return ((total_loss,) + output) if total_loss is not None else output
return QuestionAnsweringModelOutput(
loss=total_loss,
start_logits=start_logits,
end_logits=end_logits,
hidden_states=outputs.hidden_states,
attentions=outputs.attentions,
)
| 49,079 | 42.66548 | 128 | py |
transformers | transformers-main/src/transformers/models/nystromformer/__init__.py | # Copyright 2022 The HuggingFace Team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
from typing import TYPE_CHECKING
from ...utils import OptionalDependencyNotAvailable, _LazyModule, is_tokenizers_available, is_torch_available
_import_structure = {
"configuration_nystromformer": ["NYSTROMFORMER_PRETRAINED_CONFIG_ARCHIVE_MAP", "NystromformerConfig"],
}
try:
if not is_torch_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
_import_structure["modeling_nystromformer"] = [
"NYSTROMFORMER_PRETRAINED_MODEL_ARCHIVE_LIST",
"NystromformerForMaskedLM",
"NystromformerForMultipleChoice",
"NystromformerForQuestionAnswering",
"NystromformerForSequenceClassification",
"NystromformerForTokenClassification",
"NystromformerLayer",
"NystromformerModel",
"NystromformerPreTrainedModel",
]
if TYPE_CHECKING:
from .configuration_nystromformer import NYSTROMFORMER_PRETRAINED_CONFIG_ARCHIVE_MAP, NystromformerConfig
try:
if not is_torch_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
from .modeling_nystromformer import (
NYSTROMFORMER_PRETRAINED_MODEL_ARCHIVE_LIST,
NystromformerForMaskedLM,
NystromformerForMultipleChoice,
NystromformerForQuestionAnswering,
NystromformerForSequenceClassification,
NystromformerForTokenClassification,
NystromformerLayer,
NystromformerModel,
NystromformerPreTrainedModel,
)
else:
import sys
sys.modules[__name__] = _LazyModule(__name__, globals()["__file__"], _import_structure, module_spec=__spec__)
| 2,337 | 33.382353 | 113 | py |
transformers | transformers-main/src/transformers/models/instructblip/convert_instructblip_original_to_pytorch.py | # coding=utf-8
# Copyright 2023 The HuggingFace Inc. team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
"""
Convert InstructBLIP checkpoints from the original repository.
URL: https://github.com/salesforce/LAVIS/tree/main/projects/instructblip
"""
import argparse
import requests
import torch
# pip3 install salesforce-lavis
# I'm actually installing a slightly modified version: pip3 install git+https://github.com/nielsrogge/LAVIS.git@fix_lavis_float32 (there's also the fix_lavis branch)
# also note: to convert Vicuna checkpoints, we had to include /home/niels/python_projects/checkpoints/FastChat/vicuna-7b in lavis/configs/models/blip2/blip2_instruct_vicuna7b.yaml
# same for Vicuna-13b
from lavis.models import load_model_and_preprocess
from PIL import Image
from transformers import (
AutoTokenizer,
BlipImageProcessor,
InstructBlipConfig,
InstructBlipForConditionalGeneration,
InstructBlipProcessor,
InstructBlipQFormerConfig,
InstructBlipVisionConfig,
LlamaConfig,
LlamaTokenizerFast,
T5Config,
T5TokenizerFast,
)
from transformers.utils.constants import OPENAI_CLIP_MEAN, OPENAI_CLIP_STD
def load_demo_image():
url = "https://raw.githubusercontent.com/salesforce/LAVIS/main/docs/_static/Confusing-Pictures.jpg"
image = Image.open(requests.get(url, stream=True).raw).convert("RGB")
return image
# here we list all keys to be renamed (original name on the left, our name on the right)
def create_rename_keys(config):
rename_keys = []
# fmt: off
# vision encoder
rename_keys.append(("visual_encoder.cls_token", "vision_model.embeddings.class_embedding"))
rename_keys.append(("visual_encoder.pos_embed", "vision_model.embeddings.position_embedding"))
rename_keys.append(("visual_encoder.patch_embed.proj.weight", "vision_model.embeddings.patch_embedding.weight"))
rename_keys.append(("visual_encoder.patch_embed.proj.bias", "vision_model.embeddings.patch_embedding.bias"))
rename_keys.append(("ln_vision.weight", "vision_model.post_layernorm.weight"))
rename_keys.append(("ln_vision.bias", "vision_model.post_layernorm.bias"))
for i in range(config.vision_config.num_hidden_layers):
rename_keys.append((f"visual_encoder.blocks.{i}.norm1.weight", f"vision_model.encoder.layers.{i}.layer_norm1.weight"))
rename_keys.append((f"visual_encoder.blocks.{i}.norm1.bias", f"vision_model.encoder.layers.{i}.layer_norm1.bias"))
rename_keys.append((f"visual_encoder.blocks.{i}.norm2.weight", f"vision_model.encoder.layers.{i}.layer_norm2.weight"))
rename_keys.append((f"visual_encoder.blocks.{i}.norm2.bias", f"vision_model.encoder.layers.{i}.layer_norm2.bias"))
rename_keys.append((f"visual_encoder.blocks.{i}.attn.qkv.weight", f"vision_model.encoder.layers.{i}.self_attn.qkv.weight"))
rename_keys.append((f"visual_encoder.blocks.{i}.attn.proj.weight", f"vision_model.encoder.layers.{i}.self_attn.projection.weight",))
rename_keys.append((f"visual_encoder.blocks.{i}.attn.proj.bias", f"vision_model.encoder.layers.{i}.self_attn.projection.bias"))
rename_keys.append((f"visual_encoder.blocks.{i}.mlp.fc1.weight", f"vision_model.encoder.layers.{i}.mlp.fc1.weight"))
rename_keys.append((f"visual_encoder.blocks.{i}.mlp.fc1.bias", f"vision_model.encoder.layers.{i}.mlp.fc1.bias"))
rename_keys.append((f"visual_encoder.blocks.{i}.mlp.fc2.weight", f"vision_model.encoder.layers.{i}.mlp.fc2.weight"))
rename_keys.append((f"visual_encoder.blocks.{i}.mlp.fc2.bias", f"vision_model.encoder.layers.{i}.mlp.fc2.bias"))
# QFormer
rename_keys.append(("Qformer.bert.embeddings.LayerNorm.weight", "qformer.embeddings.layernorm.weight"))
rename_keys.append(("Qformer.bert.embeddings.LayerNorm.bias", "qformer.embeddings.layernorm.bias"))
# fmt: on
return rename_keys
def rename_key(dct, old, new):
val = dct.pop(old)
dct[new] = val
def read_in_q_v_bias(state_dict, config):
for i in range(config.vision_config.num_hidden_layers):
# read in original q and v biases
q_bias = state_dict.pop(f"visual_encoder.blocks.{i}.attn.q_bias")
v_bias = state_dict.pop(f"visual_encoder.blocks.{i}.attn.v_bias")
# next, set bias in the state dict
qkv_bias = torch.cat((q_bias, torch.zeros_like(v_bias, requires_grad=False), v_bias))
state_dict[f"vision_model.encoder.layers.{i}.self_attn.qkv.bias"] = qkv_bias
def get_blip2_config(model_name):
image_size = 364 if "coco" in model_name else 224
vision_config = InstructBlipVisionConfig(image_size=image_size).to_dict()
# make sure the models have proper bos_token_id and eos_token_id set (important for generation)
# seems like flan-T5 models don't have bos_token_id properly set?
if "t5-xl" in model_name:
text_config = T5Config.from_pretrained("google/flan-t5-xl", dense_act_fn="gelu", bos_token_id=1).to_dict()
elif "t5-xxl" in model_name:
text_config = T5Config.from_pretrained("google/flan-t5-xxl", dense_act_fn="gelu", bos_token_id=1).to_dict()
elif "vicuna-7b" in model_name:
text_config = LlamaConfig.from_pretrained("decapoda-research/llama-7b-hf", vocab_size=32001).to_dict()
elif "vicuna-13b" in model_name:
text_config = LlamaConfig.from_pretrained("decapoda-research/llama-13b-hf", vocab_size=32001).to_dict()
else:
raise ValueError("Model name not supported")
# the authors add one special "[DEC]" token to the vocab of Q-Former, hence vocab size = 30522 + 1
qformer_config = InstructBlipQFormerConfig(vocab_size=30523).to_dict()
config = InstructBlipConfig(vision_config=vision_config, text_config=text_config, qformer_config=qformer_config)
return config, image_size
@torch.no_grad()
def convert_blip2_checkpoint(model_name, pytorch_dump_folder_path=None, push_to_hub=False):
"""
Copy/paste/tweak model's weights to Transformers design.
"""
qformer_tokenizer = AutoTokenizer.from_pretrained("bert-base-uncased", truncation_side="left")
qformer_tokenizer.add_special_tokens({"bos_token": "[DEC]"})
if "t5" in model_name:
tokenizer = T5TokenizerFast.from_pretrained("google/flan-t5-xl", truncation_side="left")
elif "vicuna" in model_name:
# the following was used in the original implementation:
# tokenizer = LlamaTokenizer.from_pretrained("huggyllama/llama-7b", use_fast=False, truncation_side="left")
# tokenizer.add_special_tokens({"pad_token": "[PAD]"})
# tokenizer.add_special_tokens({"bos_token": "</s>"})
# tokenizer.add_special_tokens({"eos_token": "</s>"})
# tokenizer.add_special_tokens({"unk_token": "</s>"})
tokenizer = LlamaTokenizerFast.from_pretrained(
"huggyllama/llama-7b", truncation_side="left", bos_token="</s>", unk_token="</s>"
)
tokenizer.add_special_tokens({"pad_token": "[PAD]"})
config, image_size = get_blip2_config(model_name)
hf_model = InstructBlipForConditionalGeneration(config).eval()
model_name_to_original = {
"instructblip-vicuna-7b": ("blip2_vicuna_instruct", "vicuna7b"),
"instructblip-vicuna-13b": ("blip2_vicuna_instruct", "vicuna13b"),
"instructblip-flan-t5-xl": ("blip2_t5_instruct", "flant5xl"),
"instructblip-flan-t5-xxl": ("blip2_t5_instruct", "flant5xxl"),
}
name, type = model_name_to_original[model_name]
# load original model
print("Loading original model...")
hf_model_device = "cuda:1" if torch.cuda.is_available() else "cpu"
lavis_device = "cuda:2" if torch.cuda.is_available() else "cpu"
original_model, vis_processors, _ = load_model_and_preprocess(
name=name, model_type=type, is_eval=True, device=lavis_device
)
original_model.eval()
print("Done!")
# update state dict keys
state_dict = original_model.state_dict()
rename_keys = create_rename_keys(config)
for src, dest in rename_keys:
rename_key(state_dict, src, dest)
# some keys can be renamed efficiently
for key, val in state_dict.copy().items():
val = state_dict.pop(key)
if key.startswith("Qformer.bert"):
key = key.replace("Qformer.bert", "qformer")
if "attention.self" in key:
key = key.replace("self", "attention")
if "llm_proj" in key:
key = key.replace("llm_proj", "language_projection")
if "t5_proj" in key:
key = key.replace("t5_proj", "language_projection")
if key.startswith("llm_model"):
key = key.replace("llm_model", "language_model")
if key.startswith("t5"):
key = key.replace("t5", "language")
state_dict[key] = val
# read in qv biases
read_in_q_v_bias(state_dict, config)
# note: weights get loaded in torch.float32 by default
hf_model.load_state_dict(state_dict, strict=True)
image = load_demo_image()
prompt = "What is unusual about this image?"
# create processor
image_processor = BlipImageProcessor(
size={"height": image_size, "width": image_size}, image_mean=OPENAI_CLIP_MEAN, image_std=OPENAI_CLIP_STD
)
processor = InstructBlipProcessor(
image_processor=image_processor,
tokenizer=tokenizer,
qformer_tokenizer=qformer_tokenizer,
)
inputs = processor(images=image, text=prompt, return_tensors="pt").to(hf_model_device)
# make sure processor creates exact same pixel values
original_pixel_values = vis_processors["eval"](image).unsqueeze(0).to(lavis_device)
pixel_values = inputs.pixel_values
assert torch.allclose(original_pixel_values.to(pixel_values.device), pixel_values)
original_model.to(lavis_device)
hf_model.to(hf_model_device)
with torch.no_grad():
if "vicuna" in model_name:
original_logits = original_model({"image": original_pixel_values, "text_input": [prompt]}).logits
logits = hf_model(**inputs).logits
else:
original_logits = original_model(
{"image": original_pixel_values, "text_input": [prompt], "text_output": ["\n"]}
).logits
label_input_ids = tokenizer("\n", return_tensors="pt").input_ids.to(hf_model_device)
labels = label_input_ids.masked_fill(label_input_ids == tokenizer.pad_token_id, -100)
logits = hf_model(**inputs, labels=labels).logits
print("First values of original logits:", original_logits[0, :3, :3])
print("First values of HF logits:", logits[0, :3, :3])
# assert values
assert original_logits.shape == logits.shape
atol = 1e-4 if "vicuna" in model_name else 1e-5
assert torch.allclose(original_logits.to(logits.device), logits, atol=atol)
print("Looks ok!")
print("Generating with original model...")
original_outputs = original_model.generate({"image": original_pixel_values, "prompt": prompt}, num_beams=5)
# important: we need to cast the weights of the HF model to the appropriate type
print("Generating with HF model...")
outputs = hf_model.generate(
**inputs,
do_sample=False,
num_beams=5,
max_length=256,
min_length=1,
top_p=0.9,
repetition_penalty=1.5,
length_penalty=1.0,
temperature=1,
)
if "vicuna" in model_name:
# convert output id 0 to 2 (eos_token_id)
# TODO add this in the generate method?
outputs[outputs == 0] = 2
print("Original generation:", original_outputs)
output_text = processor.batch_decode(outputs, skip_special_tokens=True)
output_text = [text.strip() for text in output_text]
print("HF generation:", output_text)
if pytorch_dump_folder_path is not None:
processor.save_pretrained(pytorch_dump_folder_path)
hf_model.save_pretrained(pytorch_dump_folder_path)
if push_to_hub:
processor.push_to_hub(f"Salesforce/{model_name}")
hf_model.push_to_hub(f"Salesforce/{model_name}")
if __name__ == "__main__":
parser = argparse.ArgumentParser()
choices = [
"instructblip-vicuna-7b",
"instructblip-vicuna-13b",
"instructblip-flan-t5-xl",
"instructblip-flan-t5-xxl",
]
parser.add_argument(
"--model_name",
default="instructblip-flan-t5-xl",
choices=choices,
type=str,
help="Path to hf config.json of model to convert",
)
parser.add_argument("--pytorch_dump_folder_path", default=None, type=str, help="Path to the output PyTorch model.")
parser.add_argument(
"--push_to_hub",
action="store_true",
help="Whether to push the model and processor to the hub after converting",
)
args = parser.parse_args()
convert_blip2_checkpoint(args.model_name, args.pytorch_dump_folder_path, args.push_to_hub)
| 13,387 | 43.039474 | 179 | py |
transformers | transformers-main/src/transformers/models/instructblip/modeling_instructblip.py | # coding=utf-8
# Copyright 2023 The Salesforce Authors and The HuggingFace Team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
""" PyTorch InstructBLIP model."""
import math
from dataclasses import dataclass
from typing import Any, Optional, Tuple, Union
import torch
import torch.utils.checkpoint
from torch import nn
from torch.nn import CrossEntropyLoss
from ...activations import ACT2FN
from ...modeling_outputs import (
BaseModelOutput,
BaseModelOutputWithPastAndCrossAttentions,
BaseModelOutputWithPooling,
BaseModelOutputWithPoolingAndCrossAttentions,
)
from ...modeling_utils import PreTrainedModel
from ...pytorch_utils import apply_chunking_to_forward, find_pruneable_heads_and_indices, prune_linear_layer
from ...utils import (
ModelOutput,
add_start_docstrings,
add_start_docstrings_to_model_forward,
logging,
replace_return_docstrings,
)
from ..auto import AutoModelForCausalLM, AutoModelForSeq2SeqLM
from .configuration_instructblip import InstructBlipConfig, InstructBlipQFormerConfig, InstructBlipVisionConfig
logger = logging.get_logger(__name__)
_CHECKPOINT_FOR_DOC = "Salesforce/instructblip-flan-t5-xl"
INSTRUCTBLIP_PRETRAINED_MODEL_ARCHIVE_LIST = [
"Salesforce/instructblip-flan-t5-xl",
# See all InstructBLIP models at https://huggingface.co/models?filter=instructblip
]
@dataclass
# Copied from transformers.models.blip_2.modeling_blip_2.Blip2ForConditionalGenerationModelOutput with Blip2->InstructBlip
class InstructBlipForConditionalGenerationModelOutput(ModelOutput):
"""
Class defining the outputs of [`InstructBlipForConditionalGeneration`].
Args:
loss (`torch.FloatTensor`, *optional*, returned when `labels` is provided, `torch.FloatTensor` of shape `(1,)`):
Language modeling loss from the language model.
logits (`torch.FloatTensor` of shape `(batch_size, sequence_length, config.vocab_size)`):
Prediction scores of the language modeling head of the language model.
vision_outputs (`BaseModelOutputWithPooling`):
Outputs of the vision encoder.
qformer_outputs (`BaseModelOutputWithPoolingAndCrossAttentions`):
Outputs of the Q-Former (Querying Transformer).
language_model_outputs (`CausalLMOutputWithPast` or `Seq2SeqLMOutput`):
Outputs of the language model.
"""
loss: Optional[Tuple[torch.FloatTensor]] = None
logits: Optional[Tuple[torch.FloatTensor]] = None
vision_outputs: Optional[torch.FloatTensor] = None
qformer_outputs: Optional[Tuple[torch.FloatTensor]] = None
language_model_outputs: Optional[Tuple[torch.FloatTensor]] = None
def to_tuple(self) -> Tuple[Any]:
return tuple(
self[k]
if k not in ["vision_outputs", "qformer_outputs", "language_model_outputs"]
else getattr(self, k).to_tuple()
for k in self.keys()
)
# Copied from transformers.models.blip.modeling_blip.BlipVisionEmbeddings with Blip->InstructBlip
class InstructBlipVisionEmbeddings(nn.Module):
def __init__(self, config: InstructBlipVisionConfig):
super().__init__()
self.config = config
self.embed_dim = config.hidden_size
self.image_size = config.image_size
self.patch_size = config.patch_size
self.class_embedding = nn.Parameter(torch.randn(1, 1, self.embed_dim))
self.patch_embedding = nn.Conv2d(
in_channels=3, out_channels=self.embed_dim, kernel_size=self.patch_size, stride=self.patch_size
)
self.num_patches = (self.image_size // self.patch_size) ** 2
self.num_positions = self.num_patches + 1
self.position_embedding = nn.Parameter(torch.randn(1, self.num_positions, self.embed_dim))
def forward(self, pixel_values: torch.FloatTensor) -> torch.Tensor:
batch_size = pixel_values.shape[0]
target_dtype = self.patch_embedding.weight.dtype
patch_embeds = self.patch_embedding(pixel_values) # shape = [*, width, grid, grid]
patch_embeds = patch_embeds.flatten(2).transpose(1, 2)
class_embeds = self.class_embedding.expand(batch_size, 1, -1).to(target_dtype)
embeddings = torch.cat([class_embeds, patch_embeds], dim=1)
embeddings = embeddings + self.position_embedding[:, : embeddings.size(1), :].to(target_dtype)
return embeddings
# Copied from transformers.models.blip_2.modeling_blip_2.Blip2Attention with Blip2->InstructBlip
class InstructBlipAttention(nn.Module):
"""Multi-headed attention from 'Attention Is All You Need' paper"""
def __init__(self, config):
super().__init__()
self.config = config
self.embed_dim = config.hidden_size
self.num_heads = config.num_attention_heads
self.head_dim = self.embed_dim // self.num_heads
if self.head_dim * self.num_heads != self.embed_dim:
raise ValueError(
f"embed_dim must be divisible by num_heads (got `embed_dim`: {self.embed_dim} and `num_heads`:"
f" {self.num_heads})."
)
self.scale = self.head_dim**-0.5
self.dropout = nn.Dropout(config.attention_dropout)
# small tweak here compared to CLIP, no bias here
self.qkv = nn.Linear(self.embed_dim, 3 * self.embed_dim, bias=False)
if config.qkv_bias:
q_bias = nn.Parameter(torch.zeros(self.embed_dim))
v_bias = nn.Parameter(torch.zeros(self.embed_dim))
else:
q_bias = None
v_bias = None
if q_bias is not None:
qkv_bias = torch.cat((q_bias, torch.zeros_like(v_bias, requires_grad=False), v_bias))
self.qkv.bias = nn.Parameter(qkv_bias)
self.projection = nn.Linear(self.embed_dim, self.embed_dim)
def _shape(self, tensor: torch.Tensor, seq_len: int, bsz: int):
return tensor.view(bsz, seq_len, self.num_heads, self.head_dim).transpose(1, 2).contiguous()
def forward(
self,
hidden_states: torch.Tensor,
head_mask: Optional[torch.Tensor] = None,
output_attentions: Optional[bool] = False,
) -> Tuple[torch.Tensor, Optional[torch.Tensor], Optional[Tuple[torch.Tensor]]]:
"""Input shape: Batch x Time x Channel"""
bsz, tgt_len, embed_dim = hidden_states.size()
mixed_qkv = self.qkv(hidden_states)
mixed_qkv = mixed_qkv.reshape(bsz, tgt_len, 3, self.num_heads, embed_dim // self.num_heads).permute(
2, 0, 3, 1, 4
)
query_states, key_states, value_states = mixed_qkv[0], mixed_qkv[1], mixed_qkv[2]
# Take the dot product between "query" and "key" to get the raw attention scores.
attention_scores = torch.matmul(query_states, key_states.transpose(-1, -2))
attention_scores = attention_scores * self.scale
# Normalize the attention scores to probabilities.
attention_probs = nn.functional.softmax(attention_scores, dim=-1)
# This is actually dropping out entire tokens to attend to, which might
# seem a bit unusual, but is taken from the original Transformer paper.
attention_probs = self.dropout(attention_probs)
# Mask heads if we want to
if head_mask is not None:
attention_probs = attention_probs * head_mask
context_layer = torch.matmul(attention_probs, value_states).permute(0, 2, 1, 3)
new_context_layer_shape = context_layer.size()[:-2] + (self.embed_dim,)
context_layer = context_layer.reshape(new_context_layer_shape)
output = self.projection(context_layer)
outputs = (output, attention_probs) if output_attentions else (output, None)
return outputs
# Copied from transformers.models.blip.modeling_blip.BlipMLP
class InstructBlipMLP(nn.Module):
def __init__(self, config):
super().__init__()
self.config = config
self.activation_fn = ACT2FN[config.hidden_act]
self.fc1 = nn.Linear(config.hidden_size, config.intermediate_size)
self.fc2 = nn.Linear(config.intermediate_size, config.hidden_size)
def forward(self, hidden_states: torch.Tensor) -> torch.Tensor:
hidden_states = self.fc1(hidden_states)
hidden_states = self.activation_fn(hidden_states)
hidden_states = self.fc2(hidden_states)
return hidden_states
# Copied from transformers.models.blip.modeling_blip.BlipEncoderLayer with Blip->InstructBlip
class InstructBlipEncoderLayer(nn.Module):
def __init__(self, config: InstructBlipConfig):
super().__init__()
self.embed_dim = config.hidden_size
self.self_attn = InstructBlipAttention(config)
self.layer_norm1 = nn.LayerNorm(self.embed_dim, eps=config.layer_norm_eps)
self.mlp = InstructBlipMLP(config)
self.layer_norm2 = nn.LayerNorm(self.embed_dim, eps=config.layer_norm_eps)
def forward(
self,
hidden_states: torch.Tensor,
attention_mask: torch.Tensor,
output_attentions: Optional[bool] = False,
) -> Tuple[torch.FloatTensor]:
"""
Args:
hidden_states (`torch.FloatTensor`): input to the layer of shape `(batch, seq_len, embed_dim)`
attention_mask (`torch.FloatTensor`): attention mask of size
`(batch, 1, tgt_len, src_len)` where padding elements are indicated by very large negative values.
`(config.encoder_attention_heads,)`.
output_attentions (`bool`, *optional*):
Whether or not to return the attentions tensors of all attention layers. See `attentions` under
returned tensors for more detail.
"""
residual = hidden_states
hidden_states = self.layer_norm1(hidden_states)
hidden_states, attn_weights = self.self_attn(
hidden_states=hidden_states,
head_mask=attention_mask,
output_attentions=output_attentions,
)
hidden_states = hidden_states + residual
residual = hidden_states
hidden_states = self.layer_norm2(hidden_states)
hidden_states = self.mlp(hidden_states)
hidden_states = hidden_states + residual
outputs = (hidden_states,)
if output_attentions:
outputs += (attn_weights,)
return outputs
class InstructBlipPreTrainedModel(PreTrainedModel):
"""
An abstract class to handle weights initialization and a simple interface for downloading and loading pretrained
models.
"""
config_class = InstructBlipConfig
base_model_prefix = "blip"
supports_gradient_checkpointing = True
_no_split_modules = ["InstructBlipAttention", "InstructBlipQFormerMultiHeadAttention"]
_keep_in_fp32_modules = []
# Copied from transformers.models.blip_2.modeling_blip_2.Blip2PreTrainedModel._init_weights with Blip2->InstructBlip
def _init_weights(self, module):
"""Initialize the weights"""
factor = self.config.initializer_range
if isinstance(module, nn.Conv2d) or isinstance(module, nn.Embedding) or isinstance(module, nn.Linear):
module.weight.data.normal_(mean=0.0, std=factor)
if hasattr(module, "bias") and module.bias is not None:
module.bias.data.zero_()
if isinstance(module, InstructBlipVisionEmbeddings):
if hasattr(self.config, "vision_config"):
factor = self.config.vision_config.initializer_range
nn.init.trunc_normal_(module.position_embedding, mean=0.0, std=factor)
nn.init.trunc_normal_(module.class_embedding, mean=0.0, std=factor)
elif isinstance(module, nn.LayerNorm):
module.bias.data.zero_()
module.weight.data.fill_(1.0)
elif isinstance(module, nn.Linear) and module.bias is not None:
module.bias.data.zero_()
def _set_gradient_checkpointing(self, module, value=False):
if isinstance(module, InstructBlipEncoder):
module.gradient_checkpointing = value
INSTRUCTBLIP_START_DOCSTRING = r"""
This model inherits from [`PreTrainedModel`]. Check the superclass documentation for the generic methods the
library implements for all its model (such as downloading or saving, resizing the input embeddings, pruning heads
etc.)
This model is also a PyTorch [torch.nn.Module](https://pytorch.org/docs/stable/nn.html#torch.nn.Module) subclass.
Use it as a regular PyTorch Module and refer to the PyTorch documentation for all matter related to general usage
and behavior.
Parameters:
config ([`InstructBlipConfig`]): Model configuration class with all the parameters of the model.
Initializing with a config file does not load the weights associated with the model, only the
configuration. Check out the [`~PreTrainedModel.from_pretrained`] method to load the model weights.
"""
INSTRUCTBLIP_VISION_INPUTS_DOCSTRING = r"""
Args:
pixel_values (`torch.FloatTensor` of shape `(batch_size, num_channels, height, width)`):
Pixel values. Pixel values can be obtained using [`InstructBlipProcessor`]. See
[`InstructBlipProcessor.__call__`] for details.
output_attentions (`bool`, *optional*):
Whether or not to return the attentions tensors of all attention layers. See `attentions` under returned
tensors for more detail.
output_hidden_states (`bool`, *optional*):
Whether or not to return the hidden states of all layers. See `hidden_states` under returned tensors for
more detail.
return_dict (`bool`, *optional*):
Whether or not to return a [`~utils.ModelOutput`] instead of a plain tuple.
"""
INSTRUCTBLIP_INPUTS_DOCSTRING = r"""
Args:
pixel_values (`torch.FloatTensor` of shape `(batch_size, num_channels, height, width)`):
Pixel values. Pixel values can be obtained using [`InstructBlipProcessor`]. See
[`InstructBlipProcessor.__call__`] for details.
qformer_input_ids (`torch.LongTensor` of shape `(batch_size, sequence_length)`, *optional*):
Indices of input sequence tokens in the vocabulary of the Q-Former. Input tokens can optionally be provided
to serve as text prompt, which the Q-Former model will encode.
Indices can be obtained using [`InstructBlipProcessor`]. See [`InstructBlipProcessor.__call__`] for
details.
[What are input IDs?](../glossary#input-ids)
qformer_attention_mask (`torch.Tensor` of shape `(batch_size, sequence_length)`, *optional*):
Mask to avoid performing attention on padding token indices. Mask values selected in `[0, 1]`:
- 1 for tokens that are **not masked**,
- 0 for tokens that are **masked**.
[What are attention masks?](../glossary#attention-mask)
input_ids (`torch.LongTensor` of shape `(batch_size, sequence_length)`, *optional*):
Indices of input sequence tokens in the vocabulary of the language model. Input tokens can optionally be
provided to serve as text prompt, which the language model can continue.
Indices can be obtained using [`InstructBlipProcessor`]. See [`InstructBlipProcessor.__call__`] for
details.
[What are input IDs?](../glossary#input-ids)
attention_mask (`torch.Tensor` of shape `(batch_size, sequence_length)`, *optional*):
Mask to avoid performing attention on padding token indices. Mask values selected in `[0, 1]`:
- 1 for tokens that are **not masked**,
- 0 for tokens that are **masked**.
[What are attention masks?](../glossary#attention-mask)
decoder_input_ids (`torch.LongTensor` of shape `(batch_size, target_sequence_length)`, *optional*):
Indices of decoder input sequence tokens in the vocabulary of the language model. Only relevant in case an
encoder-decoder language model (like T5) is used.
Indices can be obtained using [`AutoTokenizer`]. See [`PreTrainedTokenizer.encode`] and
[`PreTrainedTokenizer.__call__`] for details. [What are decoder input IDs?](../glossary#decoder-input-ids)
decoder_attention_mask (`torch.BoolTensor` of shape `(batch_size, target_sequence_length)`, *optional*):
Default behavior: generate a tensor that ignores pad tokens in `decoder_input_ids`. Causal mask will also
be used by default.
Only relevant in case an encoder-decoder language model (like T5) is used.
output_attentions (`bool`, *optional*):
Whether or not to return the attentions tensors of all attention layers. See `attentions` under returned
tensors for more detail.
output_hidden_states (`bool`, *optional*):
Whether or not to return the hidden states of all layers. See `hidden_states` under returned tensors for
more detail.
return_dict (`bool`, *optional*):
Whether or not to return a [`~utils.ModelOutput`] instead of a plain tuple.
"""
# Copied from transformers.models.blip.modeling_blip.BlipEncoder with Blip->InstructBlip
class InstructBlipEncoder(nn.Module):
"""
Transformer encoder consisting of `config.num_hidden_layers` self attention layers. Each layer is a
[`InstructBlipEncoderLayer`].
Args:
config (`InstructBlipConfig`):
The corresponding vision configuration for the `InstructBlipEncoder`.
"""
def __init__(self, config: InstructBlipConfig):
super().__init__()
self.config = config
self.layers = nn.ModuleList([InstructBlipEncoderLayer(config) for _ in range(config.num_hidden_layers)])
self.gradient_checkpointing = False
def forward(
self,
inputs_embeds,
attention_mask: Optional[torch.Tensor] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[Tuple, BaseModelOutput]:
r"""
Args:
inputs_embeds (`torch.FloatTensor` of shape `(batch_size, sequence_length, hidden_size)`):
Embedded representation of the inputs. Should be float, not int tokens.
attention_mask (`torch.Tensor` of shape `(batch_size, sequence_length)`, *optional*):
Mask to avoid performing attention on padding token indices. Mask values selected in `[0, 1]`:
- 1 for tokens that are **not masked**,
- 0 for tokens that are **masked**.
[What are attention masks?](../glossary#attention-mask)
output_attentions (`bool`, *optional*):
Whether or not to return the attentions tensors of all attention layers. See `attentions` under
returned tensors for more detail.
output_hidden_states (`bool`, *optional*):
Whether or not to return the hidden states of all layers. See `hidden_states` under returned tensors
for more detail.
return_dict (`bool`, *optional*):
Whether or not to return a [`~utils.ModelOutput`] instead of a plain tuple.
"""
output_attentions = output_attentions if output_attentions is not None else self.config.output_attentions
output_hidden_states = (
output_hidden_states if output_hidden_states is not None else self.config.output_hidden_states
)
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
encoder_states = () if output_hidden_states else None
all_attentions = () if output_attentions else None
hidden_states = inputs_embeds
for idx, encoder_layer in enumerate(self.layers):
if output_hidden_states:
encoder_states = encoder_states + (hidden_states,)
if self.gradient_checkpointing and self.training:
def create_custom_forward(module):
def custom_forward(*inputs):
return module(*inputs, output_attentions)
return custom_forward
layer_outputs = torch.utils.checkpoint.checkpoint(
create_custom_forward(encoder_layer),
hidden_states,
attention_mask,
)
else:
layer_outputs = encoder_layer(
hidden_states,
attention_mask,
output_attentions=output_attentions,
)
hidden_states = layer_outputs[0]
if output_attentions:
all_attentions = all_attentions + (layer_outputs[1],)
if output_hidden_states:
encoder_states = encoder_states + (hidden_states,)
if not return_dict:
return tuple(v for v in [hidden_states, encoder_states, all_attentions] if v is not None)
return BaseModelOutput(
last_hidden_state=hidden_states, hidden_states=encoder_states, attentions=all_attentions
)
# Copied from transformers.models.blip.modeling_blip.BlipVisionModel with Blip->InstructBlip, BLIP->INSTRUCTBLIP
class InstructBlipVisionModel(InstructBlipPreTrainedModel):
main_input_name = "pixel_values"
config_class = InstructBlipVisionConfig
def __init__(self, config: InstructBlipVisionConfig):
super().__init__(config)
self.config = config
embed_dim = config.hidden_size
self.embeddings = InstructBlipVisionEmbeddings(config)
self.encoder = InstructBlipEncoder(config)
self.post_layernorm = nn.LayerNorm(embed_dim, eps=config.layer_norm_eps)
self.post_init()
@add_start_docstrings_to_model_forward(INSTRUCTBLIP_VISION_INPUTS_DOCSTRING)
@replace_return_docstrings(output_type=BaseModelOutputWithPooling, config_class=InstructBlipVisionConfig)
def forward(
self,
pixel_values: Optional[torch.FloatTensor] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[Tuple, BaseModelOutputWithPooling]:
r"""
Returns:
"""
output_attentions = output_attentions if output_attentions is not None else self.config.output_attentions
output_hidden_states = (
output_hidden_states if output_hidden_states is not None else self.config.output_hidden_states
)
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
if pixel_values is None:
raise ValueError("You have to specify pixel_values")
hidden_states = self.embeddings(pixel_values)
encoder_outputs = self.encoder(
inputs_embeds=hidden_states,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
last_hidden_state = encoder_outputs[0]
last_hidden_state = self.post_layernorm(last_hidden_state)
pooled_output = last_hidden_state[:, 0, :]
pooled_output = self.post_layernorm(pooled_output)
if not return_dict:
return (last_hidden_state, pooled_output) + encoder_outputs[1:]
return BaseModelOutputWithPooling(
last_hidden_state=last_hidden_state,
pooler_output=pooled_output,
hidden_states=encoder_outputs.hidden_states,
attentions=encoder_outputs.attentions,
)
def get_input_embeddings(self):
return self.embeddings
# Copied from transformers.models.blip_2.modeling_blip_2.Blip2QFormerMultiHeadAttention with Blip2->InstructBlip
class InstructBlipQFormerMultiHeadAttention(nn.Module):
def __init__(self, config, is_cross_attention=False):
super().__init__()
self.config = config
if config.hidden_size % config.num_attention_heads != 0 and not hasattr(config, "embedding_size"):
raise ValueError(
"The hidden size (%d) is not a multiple of the number of attention heads (%d)"
% (config.hidden_size, config.num_attention_heads)
)
self.num_attention_heads = config.num_attention_heads
self.attention_head_size = int(config.hidden_size / config.num_attention_heads)
self.all_head_size = self.num_attention_heads * self.attention_head_size
self.query = nn.Linear(config.hidden_size, self.all_head_size)
if is_cross_attention:
self.key = nn.Linear(config.encoder_hidden_size, self.all_head_size)
self.value = nn.Linear(config.encoder_hidden_size, self.all_head_size)
else:
self.key = nn.Linear(config.hidden_size, self.all_head_size)
self.value = nn.Linear(config.hidden_size, self.all_head_size)
self.dropout = nn.Dropout(config.attention_probs_dropout_prob)
self.position_embedding_type = getattr(config, "position_embedding_type", "absolute")
if self.position_embedding_type == "relative_key" or self.position_embedding_type == "relative_key_query":
self.max_position_embeddings = config.max_position_embeddings
self.distance_embedding = nn.Embedding(2 * config.max_position_embeddings - 1, self.attention_head_size)
self.save_attention = False
def save_attn_gradients(self, attn_gradients):
self.attn_gradients = attn_gradients
def get_attn_gradients(self):
return self.attn_gradients
def save_attention_map(self, attention_map):
self.attention_map = attention_map
def get_attention_map(self):
return self.attention_map
def transpose_for_scores(self, x):
new_x_shape = x.size()[:-1] + (self.num_attention_heads, self.attention_head_size)
x = x.view(*new_x_shape)
return x.permute(0, 2, 1, 3)
def forward(
self,
hidden_states,
attention_mask=None,
head_mask=None,
encoder_hidden_states=None,
encoder_attention_mask=None,
past_key_value=None,
output_attentions=False,
):
# If this is instantiated as a cross-attention module, the keys
# and values come from an encoder; the attention mask needs to be
# such that the encoder's padding tokens are not attended to.
is_cross_attention = encoder_hidden_states is not None
if is_cross_attention:
key_layer = self.transpose_for_scores(self.key(encoder_hidden_states))
value_layer = self.transpose_for_scores(self.value(encoder_hidden_states))
attention_mask = encoder_attention_mask
elif past_key_value is not None:
key_layer = self.transpose_for_scores(self.key(hidden_states))
value_layer = self.transpose_for_scores(self.value(hidden_states))
key_layer = torch.cat([past_key_value[0], key_layer], dim=2)
value_layer = torch.cat([past_key_value[1], value_layer], dim=2)
else:
key_layer = self.transpose_for_scores(self.key(hidden_states))
value_layer = self.transpose_for_scores(self.value(hidden_states))
mixed_query_layer = self.query(hidden_states)
query_layer = self.transpose_for_scores(mixed_query_layer)
past_key_value = (key_layer, value_layer)
# Take the dot product between "query" and "key" to get the raw attention scores.
attention_scores = torch.matmul(query_layer, key_layer.transpose(-1, -2))
if self.position_embedding_type == "relative_key" or self.position_embedding_type == "relative_key_query":
seq_length = hidden_states.size()[1]
position_ids_l = torch.arange(seq_length, dtype=torch.long, device=hidden_states.device).view(-1, 1)
position_ids_r = torch.arange(seq_length, dtype=torch.long, device=hidden_states.device).view(1, -1)
distance = position_ids_l - position_ids_r
positional_embedding = self.distance_embedding(distance + self.max_position_embeddings - 1)
positional_embedding = positional_embedding.to(dtype=query_layer.dtype) # fp16 compatibility
if self.position_embedding_type == "relative_key":
relative_position_scores = torch.einsum("bhld,lrd->bhlr", query_layer, positional_embedding)
attention_scores = attention_scores + relative_position_scores
elif self.position_embedding_type == "relative_key_query":
relative_position_scores_query = torch.einsum("bhld,lrd->bhlr", query_layer, positional_embedding)
relative_position_scores_key = torch.einsum("bhrd,lrd->bhlr", key_layer, positional_embedding)
attention_scores = attention_scores + relative_position_scores_query + relative_position_scores_key
attention_scores = attention_scores / math.sqrt(self.attention_head_size)
if attention_mask is not None:
# Apply the attention mask is (precomputed for all layers in BertModel forward() function)
attention_scores = attention_scores + attention_mask
# Normalize the attention scores to probabilities.
attention_probs = nn.Softmax(dim=-1)(attention_scores)
if is_cross_attention and self.save_attention:
self.save_attention_map(attention_probs)
attention_probs.register_hook(self.save_attn_gradients)
# This is actually dropping out entire tokens to attend to, which might
# seem a bit unusual, but is taken from the original Transformer paper.
attention_probs_dropped = self.dropout(attention_probs)
# Mask heads if we want to
if head_mask is not None:
attention_probs_dropped = attention_probs_dropped * head_mask
context_layer = torch.matmul(attention_probs_dropped, value_layer)
context_layer = context_layer.permute(0, 2, 1, 3).contiguous()
new_context_layer_shape = context_layer.size()[:-2] + (self.all_head_size,)
context_layer = context_layer.view(*new_context_layer_shape)
outputs = (context_layer, attention_probs) if output_attentions else (context_layer,)
outputs = outputs + (past_key_value,)
return outputs
# Copied from transformers.models.bert.modeling_bert.BertSelfOutput with Bert->InstructBlipQFormer
class InstructBlipQFormerSelfOutput(nn.Module):
def __init__(self, config):
super().__init__()
self.dense = nn.Linear(config.hidden_size, config.hidden_size)
self.LayerNorm = nn.LayerNorm(config.hidden_size, eps=config.layer_norm_eps)
self.dropout = nn.Dropout(config.hidden_dropout_prob)
def forward(self, hidden_states: torch.Tensor, input_tensor: torch.Tensor) -> torch.Tensor:
hidden_states = self.dense(hidden_states)
hidden_states = self.dropout(hidden_states)
hidden_states = self.LayerNorm(hidden_states + input_tensor)
return hidden_states
# Copied from transformers.models.blip_2.modeling_blip_2.Blip2QFormerAttention with Blip2->InstructBlip
class InstructBlipQFormerAttention(nn.Module):
def __init__(self, config, is_cross_attention=False):
super().__init__()
self.attention = InstructBlipQFormerMultiHeadAttention(config, is_cross_attention)
self.output = InstructBlipQFormerSelfOutput(config)
self.pruned_heads = set()
def prune_heads(self, heads):
if len(heads) == 0:
return
heads, index = find_pruneable_heads_and_indices(
heads, self.attention.num_attention_heads, self.attention.attention_head_size, self.pruned_heads
)
# Prune linear layers
self.attention.query = prune_linear_layer(self.attention.query, index)
self.attention.key = prune_linear_layer(self.attention.key, index)
self.attention.value = prune_linear_layer(self.attention.value, index)
self.output.dense = prune_linear_layer(self.output.dense, index, dim=1)
# Update hyper params and store pruned heads
self.attention.num_attention_heads = self.attention.num_attention_heads - len(heads)
self.attention.all_head_size = self.attention.attention_head_size * self.attention.num_attention_heads
self.pruned_heads = self.pruned_heads.union(heads)
def forward(
self,
hidden_states: torch.Tensor,
attention_mask: Optional[torch.FloatTensor] = None,
head_mask: Optional[torch.FloatTensor] = None,
encoder_hidden_states: Optional[torch.FloatTensor] = None,
encoder_attention_mask: Optional[torch.FloatTensor] = None,
past_key_value: Optional[Tuple[Tuple[torch.FloatTensor]]] = None,
output_attentions: Optional[bool] = False,
) -> Tuple[torch.Tensor]:
self_outputs = self.attention(
hidden_states,
attention_mask,
head_mask,
encoder_hidden_states,
encoder_attention_mask,
past_key_value,
output_attentions,
)
attention_output = self.output(self_outputs[0], hidden_states)
outputs = (attention_output,) + self_outputs[1:] # add attentions if we output them
return outputs
# Copied from transformers.models.bert.modeling_bert.BertIntermediate with Bert->InstructBlipQFormer
class InstructBlipQFormerIntermediate(nn.Module):
def __init__(self, config):
super().__init__()
self.dense = nn.Linear(config.hidden_size, config.intermediate_size)
if isinstance(config.hidden_act, str):
self.intermediate_act_fn = ACT2FN[config.hidden_act]
else:
self.intermediate_act_fn = config.hidden_act
def forward(self, hidden_states: torch.Tensor) -> torch.Tensor:
hidden_states = self.dense(hidden_states)
hidden_states = self.intermediate_act_fn(hidden_states)
return hidden_states
# Copied from transformers.models.bert.modeling_bert.BertOutput with Bert->InstructBlipQFormer
class InstructBlipQFormerOutput(nn.Module):
def __init__(self, config):
super().__init__()
self.dense = nn.Linear(config.intermediate_size, config.hidden_size)
self.LayerNorm = nn.LayerNorm(config.hidden_size, eps=config.layer_norm_eps)
self.dropout = nn.Dropout(config.hidden_dropout_prob)
def forward(self, hidden_states: torch.Tensor, input_tensor: torch.Tensor) -> torch.Tensor:
hidden_states = self.dense(hidden_states)
hidden_states = self.dropout(hidden_states)
hidden_states = self.LayerNorm(hidden_states + input_tensor)
return hidden_states
class InstructBlipQFormerLayer(nn.Module):
def __init__(self, config, layer_idx):
super().__init__()
self.chunk_size_feed_forward = config.chunk_size_feed_forward
self.seq_len_dim = 1
self.attention = InstructBlipQFormerAttention(config)
self.layer_idx = layer_idx
if layer_idx % config.cross_attention_frequency == 0:
self.crossattention = InstructBlipQFormerAttention(config, is_cross_attention=True)
self.has_cross_attention = True
else:
self.has_cross_attention = False
self.intermediate = InstructBlipQFormerIntermediate(config)
self.output = InstructBlipQFormerOutput(config)
self.intermediate_query = InstructBlipQFormerIntermediate(config)
self.output_query = InstructBlipQFormerOutput(config)
def forward(
self,
hidden_states,
attention_mask=None,
head_mask=None,
encoder_hidden_states=None,
encoder_attention_mask=None,
past_key_value=None,
output_attentions=False,
query_length=0,
):
# decoder uni-directional self-attention cached key/values tuple is at positions 1,2
self_attn_past_key_value = past_key_value[:2] if past_key_value is not None else None
self_attention_outputs = self.attention(
hidden_states,
attention_mask,
head_mask,
output_attentions=output_attentions,
past_key_value=self_attn_past_key_value,
)
attention_output = self_attention_outputs[0]
outputs = self_attention_outputs[1:-1]
present_key_value = self_attention_outputs[-1]
if query_length > 0:
query_attention_output = attention_output[:, :query_length, :]
if self.has_cross_attention:
if encoder_hidden_states is None:
raise ValueError("encoder_hidden_states must be given for cross-attention layers")
cross_attention_outputs = self.crossattention(
query_attention_output,
attention_mask,
head_mask,
encoder_hidden_states,
encoder_attention_mask,
output_attentions=output_attentions,
)
query_attention_output = cross_attention_outputs[0]
# add cross attentions if we output attention weights
outputs = outputs + cross_attention_outputs[1:-1]
layer_output = apply_chunking_to_forward(
self.feed_forward_chunk_query,
self.chunk_size_feed_forward,
self.seq_len_dim,
query_attention_output,
)
if attention_output.shape[1] > query_length:
layer_output_text = apply_chunking_to_forward(
self.feed_forward_chunk,
self.chunk_size_feed_forward,
self.seq_len_dim,
attention_output[:, query_length:, :],
)
layer_output = torch.cat([layer_output, layer_output_text], dim=1)
else:
layer_output = apply_chunking_to_forward(
self.feed_forward_chunk,
self.chunk_size_feed_forward,
self.seq_len_dim,
attention_output,
)
outputs = (layer_output,) + outputs
outputs = outputs + (present_key_value,)
return outputs
def feed_forward_chunk(self, attention_output):
intermediate_output = self.intermediate(attention_output)
layer_output = self.output(intermediate_output, attention_output)
return layer_output
def feed_forward_chunk_query(self, attention_output):
intermediate_output = self.intermediate_query(attention_output)
layer_output = self.output_query(intermediate_output, attention_output)
return layer_output
# Copied from transformers.models.blip_2.modeling_blip_2.Blip2QFormerEncoder with Blip2->InstructBlip
class InstructBlipQFormerEncoder(nn.Module):
def __init__(self, config):
super().__init__()
self.config = config
self.layer = nn.ModuleList(
[InstructBlipQFormerLayer(config, layer_idx) for layer_idx in range(config.num_hidden_layers)]
)
self.gradient_checkpointing = False
def forward(
self,
hidden_states,
attention_mask=None,
head_mask=None,
encoder_hidden_states=None,
encoder_attention_mask=None,
past_key_values=None,
use_cache=None,
output_attentions=False,
output_hidden_states=False,
return_dict=True,
query_length=0,
):
all_hidden_states = () if output_hidden_states else None
all_self_attentions = () if output_attentions else None
all_cross_attentions = () if output_attentions else None
next_decoder_cache = () if use_cache else None
for i in range(self.config.num_hidden_layers):
layer_module = self.layer[i]
if output_hidden_states:
all_hidden_states = all_hidden_states + (hidden_states,)
layer_head_mask = head_mask[i] if head_mask is not None else None
past_key_value = past_key_values[i] if past_key_values is not None else None
if getattr(self.config, "gradient_checkpointing", False) and self.training:
if use_cache:
logger.warn(
"`use_cache=True` is incompatible with gradient checkpointing. Setting `use_cache=False`..."
)
use_cache = False
def create_custom_forward(module):
def custom_forward(*inputs):
return module(*inputs, past_key_value, output_attentions, query_length)
return custom_forward
layer_outputs = torch.utils.checkpoint.checkpoint(
create_custom_forward(layer_module),
hidden_states,
attention_mask,
layer_head_mask,
encoder_hidden_states,
encoder_attention_mask,
)
else:
layer_outputs = layer_module(
hidden_states,
attention_mask,
layer_head_mask,
encoder_hidden_states,
encoder_attention_mask,
past_key_value,
output_attentions,
query_length,
)
hidden_states = layer_outputs[0]
if use_cache:
next_decoder_cache += (layer_outputs[-1],)
if output_attentions:
all_self_attentions = all_self_attentions + (layer_outputs[1],)
if layer_module.has_cross_attention:
all_cross_attentions = all_cross_attentions + (layer_outputs[2],)
if output_hidden_states:
all_hidden_states = all_hidden_states + (hidden_states,)
if not return_dict:
return tuple(
v
for v in [
hidden_states,
next_decoder_cache,
all_hidden_states,
all_self_attentions,
all_cross_attentions,
]
if v is not None
)
return BaseModelOutputWithPastAndCrossAttentions(
last_hidden_state=hidden_states,
past_key_values=next_decoder_cache,
hidden_states=all_hidden_states,
attentions=all_self_attentions,
cross_attentions=all_cross_attentions,
)
class InstructBlipQFormerEmbeddings(nn.Module):
"""Construct the embeddings from word and position embeddings."""
def __init__(self, config):
super().__init__()
self.word_embeddings = nn.Embedding(config.vocab_size, config.hidden_size, padding_idx=config.pad_token_id)
self.position_embeddings = nn.Embedding(config.max_position_embeddings, config.hidden_size)
self.layernorm = nn.LayerNorm(config.hidden_size, eps=config.layer_norm_eps)
self.dropout = nn.Dropout(config.hidden_dropout_prob)
# position_ids (1, len position emb) is contiguous in memory and exported when serialized
self.register_buffer(
"position_ids", torch.arange(config.max_position_embeddings).expand((1, -1)), persistent=False
)
self.position_embedding_type = getattr(config, "position_embedding_type", "absolute")
self.config = config
def forward(
self,
input_ids=None,
position_ids=None,
query_embeds=None,
past_key_values_length=0,
):
if input_ids is not None:
seq_length = input_ids.size()[1]
else:
seq_length = 0
if position_ids is None:
position_ids = self.position_ids[:, past_key_values_length : seq_length + past_key_values_length].clone()
if input_ids is not None:
embeddings = self.word_embeddings(input_ids)
if self.position_embedding_type == "absolute":
position_embeddings = self.position_embeddings(position_ids.to(embeddings.device))
embeddings = embeddings + position_embeddings
if query_embeds is not None:
embeddings = torch.cat((query_embeds, embeddings), dim=1)
else:
embeddings = query_embeds
embeddings = self.layernorm(embeddings)
embeddings = self.dropout(embeddings)
return embeddings
class InstructBlipQFormerModel(InstructBlipPreTrainedModel):
"""
Querying Transformer (Q-Former), used in InstructBLIP. Slightly modified from BLIP-2 as it also takes the
instruction as input.
"""
def __init__(self, config: InstructBlipQFormerConfig):
super().__init__(config)
self.config = config
self.embeddings = InstructBlipQFormerEmbeddings(config)
self.encoder = InstructBlipQFormerEncoder(config)
self.post_init()
def get_input_embeddings(self):
return self.embeddings.word_embeddings
def set_input_embeddings(self, value):
self.embeddings.word_embeddings = value
def _prune_heads(self, heads_to_prune):
"""
Prunes heads of the model. heads_to_prune: dict of {layer_num: list of heads to prune in this layer} See base
class PreTrainedModel
"""
for layer, heads in heads_to_prune.items():
self.encoder.layer[layer].attention.prune_heads(heads)
def get_extended_attention_mask(
self,
attention_mask: torch.Tensor,
input_shape: Tuple[int],
device: torch.device,
has_query: bool = False,
) -> torch.Tensor:
"""
Makes broadcastable attention and causal masks so that future and masked tokens are ignored.
Arguments:
attention_mask (`torch.Tensor`):
Mask with ones indicating tokens to attend to, zeros for tokens to ignore.
input_shape (`Tuple[int]`):
The shape of the input to the model.
device: (`torch.device`):
The device of the input to the model.
Returns:
`torch.Tensor` The extended attention mask, with a the same dtype as `attention_mask.dtype`.
"""
# We can provide a self-attention mask of dimensions [batch_size, from_seq_length, to_seq_length]
# ourselves in which case we just need to make it broadcastable to all heads.
if attention_mask.dim() == 3:
extended_attention_mask = attention_mask[:, None, :, :]
elif attention_mask.dim() == 2:
# Provided a padding mask of dimensions [batch_size, seq_length]
# - the model is an encoder, so make the mask broadcastable to [batch_size, num_heads, seq_length, seq_length]
extended_attention_mask = attention_mask[:, None, None, :]
else:
raise ValueError(
f"Wrong shape for input_ids (shape {input_shape}) or attention_mask (shape {attention_mask.shape})",
)
# Since attention_mask is 1.0 for positions we want to attend and 0.0 for
# masked positions, this operation will create a tensor which is 0.0 for
# positions we want to attend and -10000.0 for masked positions.
# Since we are adding it to the raw scores before the softmax, this is
# effectively the same as removing these entirely.
extended_attention_mask = extended_attention_mask.to(dtype=self.dtype) # fp16 compatibility
extended_attention_mask = (1.0 - extended_attention_mask) * -10000.0
return extended_attention_mask
def forward(
self,
input_ids,
attention_mask=None,
position_ids=None,
query_embeds=None,
head_mask=None,
encoder_hidden_states=None,
encoder_attention_mask=None,
past_key_values=None,
use_cache=None,
output_attentions=None,
output_hidden_states=None,
return_dict=None,
):
r"""
encoder_hidden_states (`torch.FloatTensor` of shape `(batch_size, sequence_length, hidden_size)`, *optional*):
Sequence of hidden-states at the output of the last layer of the encoder. Used in the cross-attention if
the model is configured as a decoder.
encoder_attention_mask (`torch.FloatTensor` of shape `(batch_size, sequence_length)`, *optional*):
Mask to avoid performing attention on the padding token indices of the encoder input. This mask is used in
the cross-attention if the model is configured as a decoder. Mask values selected in `[0, 1]`:
- 1 for tokens that are **not masked**,
- 0 for tokens that are **masked**.
past_key_values (`tuple(tuple(torch.FloatTensor))` of length `config.n_layers` with each tuple having 4 tensors of:
shape `(batch_size, num_heads, sequence_length - 1, embed_size_per_head)`): Contains precomputed key and
value hidden states of the attention blocks. Can be used to speed up decoding. If `past_key_values` are
used, the user can optionally input only the last `decoder_input_ids` (those that don't have their past key
value states given to this model) of shape `(batch_size, 1)` instead of all `decoder_input_ids` of shape
`(batch_size, sequence_length)`.
use_cache (`bool`, *optional*):
If set to `True`, `past_key_values` key value states are returned and can be used to speed up decoding (see
`past_key_values`).
"""
output_attentions = output_attentions if output_attentions is not None else self.config.output_attentions
output_hidden_states = (
output_hidden_states if output_hidden_states is not None else self.config.output_hidden_states
)
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
if input_ids is None and query_embeds is None:
raise ValueError("You have to specify query_embeds when input_ids is None")
# past_key_values_length
past_key_values_length = (
past_key_values[0][0].shape[2] - self.config.query_length if past_key_values is not None else 0
)
query_length = query_embeds.shape[1] if query_embeds is not None else 0
embedding_output = self.embeddings(
input_ids=input_ids,
position_ids=position_ids,
query_embeds=query_embeds,
past_key_values_length=past_key_values_length,
)
input_shape = embedding_output.size()[:-1]
batch_size, seq_length = input_shape
device = embedding_output.device
if attention_mask is None:
attention_mask = torch.ones(((batch_size, seq_length + past_key_values_length)), device=device)
# We can provide a self-attention mask of dimensions [batch_size, from_seq_length, to_seq_length]
# ourselves in which case we just need to make it broadcastable to all heads.
extended_attention_mask = self.get_extended_attention_mask(attention_mask, input_shape, device)
# If a 2D or 3D attention mask is provided for the cross-attention
# we need to make broadcastable to [batch_size, num_heads, seq_length, seq_length]
if encoder_hidden_states is not None:
if type(encoder_hidden_states) == list:
encoder_batch_size, encoder_sequence_length, _ = encoder_hidden_states[0].size()
else:
encoder_batch_size, encoder_sequence_length, _ = encoder_hidden_states.size()
encoder_hidden_shape = (encoder_batch_size, encoder_sequence_length)
if type(encoder_attention_mask) == list:
encoder_extended_attention_mask = [self.invert_attention_mask(mask) for mask in encoder_attention_mask]
elif encoder_attention_mask is None:
encoder_attention_mask = torch.ones(encoder_hidden_shape, device=device)
encoder_extended_attention_mask = self.invert_attention_mask(encoder_attention_mask)
else:
encoder_extended_attention_mask = self.invert_attention_mask(encoder_attention_mask)
else:
encoder_extended_attention_mask = None
# Prepare head mask if needed
# 1.0 in head_mask indicate we keep the head
# attention_probs has shape bsz x n_heads x N x N
# input head_mask has shape [num_heads] or [num_hidden_layers x num_heads]
# and head_mask is converted to shape [num_hidden_layers x batch x num_heads x seq_length x seq_length]
head_mask = self.get_head_mask(head_mask, self.config.num_hidden_layers)
encoder_outputs = self.encoder(
embedding_output,
attention_mask=extended_attention_mask,
head_mask=head_mask,
encoder_hidden_states=encoder_hidden_states,
encoder_attention_mask=encoder_extended_attention_mask,
past_key_values=past_key_values,
use_cache=use_cache,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
query_length=query_length,
)
sequence_output = encoder_outputs[0]
pooled_output = sequence_output[:, 0, :]
if not return_dict:
return (sequence_output, pooled_output) + encoder_outputs[1:]
return BaseModelOutputWithPoolingAndCrossAttentions(
last_hidden_state=sequence_output,
pooler_output=pooled_output,
past_key_values=encoder_outputs.past_key_values,
hidden_states=encoder_outputs.hidden_states,
attentions=encoder_outputs.attentions,
cross_attentions=encoder_outputs.cross_attentions,
)
@add_start_docstrings(
"""
InstructBLIP Model for generating text given an image and an optional text prompt. The model consists of a vision
encoder, Querying Transformer (Q-Former) and a language model.
One can optionally pass `input_ids` to the model, which serve as a text prompt, to make the language model continue
the prompt. Otherwise, the language model starts generating text from the [BOS] (beginning-of-sequence) token.
""",
INSTRUCTBLIP_START_DOCSTRING,
)
class InstructBlipForConditionalGeneration(InstructBlipPreTrainedModel):
config_class = InstructBlipConfig
main_input_name = "pixel_values"
def __init__(self, config: InstructBlipConfig):
super().__init__(config)
self.vision_model = InstructBlipVisionModel(config.vision_config)
self.query_tokens = nn.Parameter(torch.zeros(1, config.num_query_tokens, config.qformer_config.hidden_size))
self.qformer = InstructBlipQFormerModel(config.qformer_config)
self.language_projection = nn.Linear(config.qformer_config.hidden_size, config.text_config.hidden_size)
if config.use_decoder_only_language_model:
language_model = AutoModelForCausalLM.from_config(config.text_config)
else:
language_model = AutoModelForSeq2SeqLM.from_config(config.text_config)
if language_model._no_split_modules is not None:
self._no_split_modules.extend(language_model._no_split_modules)
if language_model._keep_in_fp32_modules is not None:
self._keep_in_fp32_modules.extend(language_model._keep_in_fp32_modules)
self.language_model = language_model
# Initialize weights and apply final processing
self.post_init()
def get_input_embeddings(self):
return self.language_model.get_input_embeddings()
def set_input_embeddings(self, value):
self.language_model.set_input_embeddings(value)
def set_output_embeddings(self, new_embeddings):
self.language_model.set_output_embeddings(new_embeddings)
def get_output_embeddings(self) -> nn.Module:
return self.language_model.get_output_embeddings()
def get_encoder(self):
return self.language_model.get_encoder()
def get_decoder(self):
return self.language_model.get_decoder()
def _tie_weights(self):
if not self.config.use_decoder_only_language_model:
self.language_model.encoder.embed_tokens = self.language_model.shared
self.language_model.decoder.embed_tokens = self.language_model.shared
def _preprocess_accelerate(self):
r"""
Some pre-processing hacks to make the model `accelerate` compatible. Check
https://github.com/huggingface/transformers/pull/21707 for more details.
"""
hf_device_map = self.hf_device_map
if len(hf_device_map) > 1 and "language_model" not in hf_device_map and torch.cuda.device_count() > 1:
# warn users about unexpected behavior when using multi-GPU + InstructBLIP + `accelerate`.
logger.warning(
"The `language_model` is not in the `hf_device_map` dictionary and you are running your script"
" in a multi-GPU environment. this may lead to unexpected behavior when using `accelerate`."
" Please pass a `device_map` that contains `language_model` to remove this warning."
" Please refer to https://github.com/huggingface/blog/blob/main/accelerate-large-models.md for"
" more details on creating a `device_map` for large models.",
)
if hasattr(self.language_model, "_hf_hook"):
self.language_model._hf_hook.io_same_device = True # For `generate` compatibility
@add_start_docstrings_to_model_forward(INSTRUCTBLIP_INPUTS_DOCSTRING)
@replace_return_docstrings(
output_type=InstructBlipForConditionalGenerationModelOutput, config_class=InstructBlipVisionConfig
)
def forward(
self,
pixel_values: torch.FloatTensor,
qformer_input_ids: torch.FloatTensor,
qformer_attention_mask: Optional[torch.LongTensor] = None,
input_ids: Optional[torch.FloatTensor] = None,
attention_mask: Optional[torch.LongTensor] = None,
decoder_input_ids: Optional[torch.LongTensor] = None,
decoder_attention_mask: Optional[torch.LongTensor] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
labels: Optional[torch.LongTensor] = None,
return_dict: Optional[bool] = None,
) -> Union[Tuple, InstructBlipForConditionalGenerationModelOutput]:
r"""
labels (`torch.LongTensor` of shape `(batch_size,)`, *optional*):
Labels for computing the language modeling loss. Indices should be in `[-100, 0, ..., config.vocab_size -
1]`. All labels set to `-100` are ignored (masked), the loss is only computed for labels in `[0, ...,
config.vocab_size]`
Returns:
Examples:
```python
>>> from transformers import InstructBlipProcessor, InstructBlipForConditionalGeneration
>>> import torch
>>> from PIL import Image
>>> import requests
>>> model = InstructBlipForConditionalGeneration.from_pretrained("Salesforce/instructblip-vicuna-7b")
>>> processor = InstructBlipProcessor.from_pretrained("Salesforce/instructblip-vicuna-7b")
>>> device = "cuda" if torch.cuda.is_available() else "cpu"
>>> model.to(device) # doctest: +IGNORE_RESULT
>>> url = "https://raw.githubusercontent.com/salesforce/LAVIS/main/docs/_static/Confusing-Pictures.jpg"
>>> image = Image.open(requests.get(url, stream=True).raw).convert("RGB")
>>> prompt = "What is unusual about this image?"
>>> inputs = processor(images=image, text=prompt, return_tensors="pt").to(device)
>>> outputs = model.generate(
... **inputs,
... do_sample=False,
... num_beams=5,
... max_length=256,
... min_length=1,
... top_p=0.9,
... repetition_penalty=1.5,
... length_penalty=1.0,
... temperature=1,
... )
>>> generated_text = processor.batch_decode(outputs, skip_special_tokens=True)[0].strip()
>>> print(generated_text)
The unusual aspect of this image is that a man is ironing clothes on the back of a yellow SUV, which is parked in the middle of a busy city street. This is an unconventional approach to ironing clothes, as it requires the man to balance himself and his ironing equipment on top of the vehicle while navigating through traffic. Additionally, the presence of taxis and other vehicles in the scene further emphasizes the unusual nature of this situation.
```"""
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
# step 1: forward the images through the vision encoder,
# to get image embeddings of shape (batch_size, seq_len, hidden_size)
vision_outputs = self.vision_model(
pixel_values=pixel_values,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
image_embeds = vision_outputs[0]
# step 2: forward the query tokens through the QFormer, using the image embeddings for cross-attention
image_attention_mask = torch.ones(image_embeds.size()[:-1], dtype=torch.long, device=image_embeds.device)
# difference with BLIP-2 here: we also feed the instruction prompt to the Q-Former
query_tokens = self.query_tokens.expand(image_embeds.shape[0], -1, -1)
query_attention_mask = torch.ones(query_tokens.size()[:-1], dtype=torch.long, device=image_embeds.device)
if qformer_attention_mask is None:
qformer_attention_mask = torch.ones_like(qformer_input_ids)
qformer_attention_mask = torch.cat([query_attention_mask, qformer_attention_mask], dim=1)
query_outputs = self.qformer(
input_ids=qformer_input_ids,
attention_mask=qformer_attention_mask,
query_embeds=query_tokens,
encoder_hidden_states=image_embeds,
encoder_attention_mask=image_attention_mask,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
query_output = query_outputs[0][:, : query_tokens.size(1), :]
# step 3: use the language model, conditioned on the query outputs and the prompt
language_model_inputs = self.language_projection(query_output)
language_model_attention_mask = torch.ones(
language_model_inputs.size()[:-1], dtype=torch.long, device=language_model_inputs.device
)
inputs_embeds = self.language_model.get_input_embeddings()(input_ids)
inputs_embeds = torch.cat([language_model_inputs, inputs_embeds.to(language_model_inputs.device)], dim=1)
if attention_mask is None:
attention_mask = torch.ones_like(input_ids)
attention_mask = torch.cat([language_model_attention_mask.to(attention_mask.device), attention_mask], dim=1)
if self.config.use_decoder_only_language_model:
outputs = self.language_model(
inputs_embeds=inputs_embeds,
attention_mask=attention_mask,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
logits = outputs.logits if return_dict else outputs[0]
loss = None
# we compute the loss here since we need to take into account the sequence length of the query embeds
if labels is not None:
labels = labels.to(logits.device)
logits = logits[:, -labels.size(1) :, :]
# Shift so that tokens < n predict n
shift_logits = logits[..., :-1, :].contiguous()
shift_labels = labels[..., 1:].contiguous().to(logits.device)
# Flatten the tokens
loss_fct = CrossEntropyLoss(reduction="mean")
loss = loss_fct(shift_logits.view(-1, self.config.text_config.vocab_size), shift_labels.view(-1))
else:
outputs = self.language_model(
inputs_embeds=inputs_embeds,
attention_mask=attention_mask,
decoder_input_ids=decoder_input_ids,
decoder_attention_mask=decoder_attention_mask,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
labels=labels,
)
loss = outputs.loss if return_dict else outputs[0]
logits = outputs.logits if return_dict else outputs[1]
if not return_dict:
output = (logits, vision_outputs, query_outputs, outputs)
return ((loss,) + output) if loss is not None else output
return InstructBlipForConditionalGenerationModelOutput(
loss=loss,
logits=logits,
vision_outputs=vision_outputs,
qformer_outputs=query_outputs,
language_model_outputs=outputs,
)
@torch.no_grad()
def generate(
self,
pixel_values: torch.FloatTensor,
qformer_input_ids: Optional[torch.LongTensor] = None,
qformer_attention_mask: Optional[torch.LongTensor] = None,
input_ids: Optional[torch.LongTensor] = None,
attention_mask: Optional[torch.LongTensor] = None,
**generate_kwargs,
) -> torch.LongTensor:
"""
Overrides `generate` function to be able to use the model as a conditional generator.
Args:
pixel_values (`torch.FloatTensor` of shape (batch_size, num_channels, height, width)):
Input images to be processed.
qformer_input_ids (`torch.LongTensor` of shape (batch_size, sequence_length), *optional*):
The sequence used as a prompt to be fed to the Q-Former module.
qformer_attention_mask (`torch.LongTensor` of shape (batch_size, sequence_length), *optional*):
Mask to avoid performing attention on padding token indices.
input_ids (`torch.LongTensor` of shape (batch_size, sequence_length), *optional*):
The sequence used as a prompt for the generation.
attention_mask (`torch.LongTensor` of shape (batch_size, sequence_length), *optional*):
Mask to avoid performing attention on padding token indices.
Returns:
captions (list): A list of strings of length batch_size * num_captions.
"""
if hasattr(self, "hf_device_map"):
# preprocess for `accelerate`
self._preprocess_accelerate()
batch_size = pixel_values.shape[0]
image_embeds = self.vision_model(pixel_values, return_dict=True).last_hidden_state
image_attention_mask = torch.ones(image_embeds.size()[:-1], dtype=torch.long, device=image_embeds.device)
query_tokens = self.query_tokens.expand(image_embeds.shape[0], -1, -1)
query_attention_mask = torch.ones(query_tokens.size()[:-1], dtype=torch.long, device=image_embeds.device)
if qformer_attention_mask is None:
qformer_attention_mask = torch.ones_like(qformer_input_ids)
qformer_attention_mask = torch.cat([query_attention_mask, qformer_attention_mask], dim=1)
query_outputs = self.qformer(
input_ids=qformer_input_ids,
attention_mask=qformer_attention_mask,
query_embeds=query_tokens,
encoder_hidden_states=image_embeds,
encoder_attention_mask=image_attention_mask,
return_dict=True,
)
query_output = query_outputs.last_hidden_state[:, : query_tokens.size(1), :]
language_model_inputs = self.language_projection(query_output)
language_attention_mask = torch.ones(
language_model_inputs.size()[:-1], dtype=torch.long, device=language_model_inputs.device
)
if input_ids is None:
input_ids = (
torch.LongTensor([[self.config.text_config.bos_token_id]])
.repeat(batch_size, 1)
.to(image_embeds.device)
)
if attention_mask is None:
attention_mask = torch.ones_like(input_ids)
attention_mask = torch.cat([language_attention_mask, attention_mask.to(language_attention_mask.device)], dim=1)
# concatenate query embeddings with prompt embeddings
inputs_embeds = self.get_input_embeddings()(input_ids)
inputs_embeds = torch.cat([language_model_inputs, inputs_embeds.to(language_model_inputs.device)], dim=1)
outputs = self.language_model.generate(
inputs_embeds=inputs_embeds,
attention_mask=attention_mask,
**generate_kwargs,
)
# the InstructBLIP authors used inconsistent tokenizer/model files during training,
# with the tokenizer's bos token being set to </s> which has ID=2,
# whereas the model's text config has bos token id = 0
if self.config.text_config.architectures[0] == "LLaMAForCausalLM":
outputs[outputs == 0] = 2
return outputs
| 70,206 | 43.889386 | 459 | py |
transformers | transformers-main/src/transformers/models/instructblip/__init__.py | # Copyright 2023 The HuggingFace Team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
from typing import TYPE_CHECKING
from ...utils import OptionalDependencyNotAvailable, _LazyModule, is_torch_available
_import_structure = {
"configuration_instructblip": [
"INSTRUCTBLIP_PRETRAINED_CONFIG_ARCHIVE_MAP",
"InstructBlipConfig",
"InstructBlipQFormerConfig",
"InstructBlipVisionConfig",
],
"processing_instructblip": ["InstructBlipProcessor"],
}
try:
if not is_torch_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
_import_structure["modeling_instructblip"] = [
"INSTRUCTBLIP_PRETRAINED_MODEL_ARCHIVE_LIST",
"InstructBlipQFormerModel",
"InstructBlipPreTrainedModel",
"InstructBlipForConditionalGeneration",
"InstructBlipVisionModel",
]
if TYPE_CHECKING:
from .configuration_instructblip import (
INSTRUCTBLIP_PRETRAINED_CONFIG_ARCHIVE_MAP,
InstructBlipConfig,
InstructBlipQFormerConfig,
InstructBlipVisionConfig,
)
from .processing_instructblip import InstructBlipProcessor
try:
if not is_torch_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
from .modeling_instructblip import (
INSTRUCTBLIP_PRETRAINED_MODEL_ARCHIVE_LIST,
InstructBlipForConditionalGeneration,
InstructBlipPreTrainedModel,
InstructBlipQFormerModel,
InstructBlipVisionModel,
)
else:
import sys
sys.modules[__name__] = _LazyModule(__name__, globals()["__file__"], _import_structure, module_spec=__spec__)
| 2,279 | 31.571429 | 113 | py |
transformers | transformers-main/src/transformers/models/umt5/convert_umt5_checkpoint_to_pytorch.py | # coding=utf-8
# Copyright 2023 Google LLC and HuggingFace Inc. team.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
"""
Convert T5X checkpoint to PyTorch
Steps:
- Install gsutil according to https://cloud.google.com/storage/docs/gsutil_install
- Get a T5X checkpoint at https://github.com/google-research/t5x/blob/main/docs/models.md#t5-11-checkpoints Example:
`gsutil -m cp -r gs://t5-data/pretrained_models/t5x/t5_1_1_small $HOME/`
- Create or download a corresponding config for the downloaded model. E.g. for T5 v1.1 small, you can use
https://huggingface.co/google/t5-v1_1-small/blob/main/config.json
- Convert:
```
python3 convert_t5x_checkpoint_to_pytorch.py --t5x_checkpoint_path=$HOME/t5_1_1_small --config_file=config.json\
--pytorch_dump_path=$HOME/t5_1_1_small_pt
```
"""
import argparse
import collections
import numpy as np
import torch
from flax import traverse_util
from t5x import checkpoints
from transformers import MT5Config, UMT5EncoderModel, UMT5ForConditionalGeneration
from transformers.utils import logging
logging.set_verbosity_info()
def t5x_relpos_bias_lookup(params, i, prefix):
"""Returns the Relative Position Bias parameters of a layer. Does not transpose."""
return params[f"{prefix}/{prefix}/relpos_bias/rel_embedding"][:, i, :]
def t5x_attention_lookup(params, i, prefix, layer_name="attention"):
"""Returns the KOQV parameters of (self-)attention. Does not transpose."""
k_tmp = k_tmp = np.ascontiguousarray(params[f"{prefix}/{prefix}/{layer_name}/key/kernel"][:, i, :, :])
k = k_tmp.reshape(k_tmp.shape[0], k_tmp.shape[1] * k_tmp.shape[2])
o_tmp = np.ascontiguousarray(params[f"{prefix}/{prefix}/{layer_name}/out/kernel"][:, i, :, :])
o = o_tmp.reshape(o_tmp.shape[0] * o_tmp.shape[1], o_tmp.shape[2])
q_tmp = np.ascontiguousarray(params[f"{prefix}/{prefix}/{layer_name}/query/kernel"][:, i, :, :])
q = q_tmp.reshape(q_tmp.shape[0], q_tmp.shape[1] * q_tmp.shape[2])
v_tmp = np.ascontiguousarray(params[f"{prefix}/{prefix}/{layer_name}/value/kernel"][:, i, :, :])
v = v_tmp.reshape(v_tmp.shape[0], v_tmp.shape[1] * v_tmp.shape[2])
return k, o, q, v
def t5x_mlp_lookup(params, i, prefix, split_mlp_wi=False):
"""Returns the MLP parameters of a layer. Does not transpose."""
if split_mlp_wi:
wi_0 = params[f"{prefix}/{prefix}/mlp/wi_0/kernel"][:, i, :]
wi_1 = params[f"{prefix}/{prefix}/mlp/wi_1/kernel"][:, i, :]
wi = (wi_0, wi_1)
else:
wi = params[f"{prefix}/{prefix}/mlp/wi/kernel"][:, i, :]
wo = params[f"{prefix}/{prefix}/mlp/wo/kernel"][:, i, :]
return wi, wo
def t5x_layer_norm_lookup(params, i, prefix, layer_name):
"""Returns the layer norm param of a layer."""
return params[f"{prefix}/{prefix}/{layer_name}/scale"][:, i]
def convert_t5x_to_pytorch(
variables: dict, *, num_layers: int, is_encoder_only: bool, scalable_attention: bool = False
):
"""Converts the parameters from T5X-Flax to Transformers-PyTorch."""
old = traverse_util.flatten_dict(variables["target"])
old = {"/".join(k): v for k, v in old.items()}
# v1.1 models have a gated GeLU with wi_0 and wi_1 instead of wi
split_mlp_wi = "encoder/encoder/mlp/wi_0/kernel" in old
print("Split MLP:", split_mlp_wi)
new = collections.OrderedDict()
# Shared embeddings.
new["shared.weight"] = old["token_embedder/embedding"]
# Encoder.
for i in range(num_layers):
# Block i, layer 0 (Self Attention).
layer_norm = t5x_layer_norm_lookup(old, i, "encoder", "pre_attention_layer_norm")
k, o, q, v = t5x_attention_lookup(old, i, "encoder", "attention")
new[f"encoder.block.{i}.layer.0.layer_norm.weight"] = layer_norm
new[f"encoder.block.{i}.layer.0.SelfAttention.k.weight"] = k.T
new[f"encoder.block.{i}.layer.0.SelfAttention.o.weight"] = o.T
new[f"encoder.block.{i}.layer.0.SelfAttention.q.weight"] = q.T
new[f"encoder.block.{i}.layer.0.SelfAttention.v.weight"] = v.T
# Block i, layer 1 (MLP).
layer_norm = t5x_layer_norm_lookup(old, i, "encoder", "pre_mlp_layer_norm")
wi, wo = t5x_mlp_lookup(old, i, "encoder", split_mlp_wi)
new[f"encoder.block.{i}.layer.1.layer_norm.weight"] = layer_norm
if split_mlp_wi:
new[f"encoder.block.{i}.layer.1.DenseReluDense.wi_0.weight"] = wi[0].T
new[f"encoder.block.{i}.layer.1.DenseReluDense.wi_1.weight"] = wi[1].T
else:
new[f"encoder.block.{i}.layer.1.DenseReluDense.wi.weight"] = wi.T
new[f"encoder.block.{i}.layer.1.DenseReluDense.wo.weight"] = wo.T
if scalable_attention:
# convert the rel_embedding of each layer
new[f"encoder.block.{i}.layer.0.SelfAttention.relative_attention_bias.weight"] = t5x_relpos_bias_lookup(
old, i, "encoder"
).T
new["encoder.final_layer_norm.weight"] = old["encoder/encoder_norm/scale"]
if not scalable_attention:
new["encoder.block.0.layer.0.SelfAttention.relative_attention_bias.weight"] = t5x_relpos_bias_lookup(
old, 0, "encoder"
).T
new["decoder.block.0.layer.0.SelfAttention.relative_attention_bias.weight"] = t5x_relpos_bias_lookup(
old, 0, "decoder"
).T
if not is_encoder_only:
# Decoder.
for i in range(num_layers):
# Block i, layer 0 (Self Attention).
layer_norm = t5x_layer_norm_lookup(old, i, "decoder", "pre_self_attention_layer_norm")
k, o, q, v = t5x_attention_lookup(old, i, "decoder", "self_attention")
new[f"decoder.block.{i}.layer.0.layer_norm.weight"] = layer_norm
new[f"decoder.block.{i}.layer.0.SelfAttention.k.weight"] = k.T
new[f"decoder.block.{i}.layer.0.SelfAttention.o.weight"] = o.T
new[f"decoder.block.{i}.layer.0.SelfAttention.q.weight"] = q.T
new[f"decoder.block.{i}.layer.0.SelfAttention.v.weight"] = v.T
# Block i, layer 1 (Cross Attention).
layer_norm = t5x_layer_norm_lookup(old, i, "decoder", "pre_cross_attention_layer_norm")
k, o, q, v = t5x_attention_lookup(old, i, "decoder", "encoder_decoder_attention")
new[f"decoder.block.{i}.layer.1.layer_norm.weight"] = layer_norm
new[f"decoder.block.{i}.layer.1.EncDecAttention.k.weight"] = k.T
new[f"decoder.block.{i}.layer.1.EncDecAttention.o.weight"] = o.T
new[f"decoder.block.{i}.layer.1.EncDecAttention.q.weight"] = q.T
new[f"decoder.block.{i}.layer.1.EncDecAttention.v.weight"] = v.T
# Block i, layer 2 (MLP).
layer_norm = t5x_layer_norm_lookup(old, i, "decoder", "pre_mlp_layer_norm")
wi, wo = t5x_mlp_lookup(old, i, "decoder", split_mlp_wi)
new[f"decoder.block.{i}.layer.2.layer_norm.weight"] = layer_norm
if split_mlp_wi:
new[f"decoder.block.{i}.layer.2.DenseReluDense.wi_0.weight"] = wi[0].T
new[f"decoder.block.{i}.layer.2.DenseReluDense.wi_1.weight"] = wi[1].T
else:
new[f"encoder.block.{i}.layer.2.DenseReluDense.wi.weight"] = wi.T
new[f"decoder.block.{i}.layer.2.DenseReluDense.wo.weight"] = wo.T
if scalable_attention:
# convert the rel_embedding of each layer
new[
f"decoder.block.{i}.layer.0.SelfAttention.relative_attention_bias.weight"
] = t5x_relpos_bias_lookup(old, i, "decoder").T
new["decoder.final_layer_norm.weight"] = old["decoder/decoder_norm/scale"]
# LM Head (only in v1.1 checkpoints, in v1.0 embeddings are used instead)
if "decoder/logits_dense/kernel" in old:
new["lm_head.weight"] = old["decoder/logits_dense/kernel"].T
return new
def make_state_dict(converted_params, is_encoder_only: bool):
"""Prepares a state dict for the PyTorch model."""
# Make a state dict with torch tensors.
state_dict = collections.OrderedDict([(k, torch.from_numpy(v.copy())) for (k, v) in converted_params.items()])
# Add what is missing.
if "encoder.embed_tokens.weight" not in state_dict:
state_dict["encoder.embed_tokens.weight"] = state_dict["shared.weight"]
if not is_encoder_only:
if "decoder.embed_tokens.weight" not in state_dict:
state_dict["decoder.embed_tokens.weight"] = state_dict["shared.weight"]
if "lm_head.weight" not in state_dict: # For old 1.0 models.
print("Using shared word embeddings as lm_head.")
state_dict["lm_head.weight"] = state_dict["shared.weight"]
return state_dict
def load_t5x_weights_in_t5(model, config, t5x_checkpoint_path, is_encoder_only, scalable_attention):
"""Replaces the params in model witht the T5X converted params."""
variables = checkpoints.load_t5x_checkpoint(t5x_checkpoint_path)
converted = convert_t5x_to_pytorch(
variables, num_layers=config.num_layers, is_encoder_only=is_encoder_only, scalable_attention=scalable_attention
)
state_dict = make_state_dict(converted, is_encoder_only)
model.load_state_dict(state_dict, strict=True)
def convert_t5x_checkpoint_to_pytorch(
t5x_checkpoint_path,
config_file,
pytorch_dump_path,
is_encoder_only: bool = False,
scalable_attention: bool = False,
):
"""Loads the config and model, converts the T5X checkpoint, and saves a PyTorch checkpoint."""
# Initialise PyTorch model
config = MT5Config.from_json_file(config_file)
print(f"Building PyTorch model from configuration: {config}")
# Non-v1.1 checkpoints could also use T5Model, but this works for all.
# The v1.0 checkpoints will simply have an LM head that is the word embeddings.
if is_encoder_only:
model = UMT5EncoderModel(config)
else:
model = UMT5ForConditionalGeneration(config)
# Load weights from tf checkpoint
load_t5x_weights_in_t5(model, config, t5x_checkpoint_path, is_encoder_only, scalable_attention)
# Save pytorch-model
print(f"Save PyTorch model to {pytorch_dump_path}")
model.save_pretrained(pytorch_dump_path)
# Verify that we can load the checkpoint.
model.from_pretrained(pytorch_dump_path)
print("Done")
if __name__ == "__main__":
parser = argparse.ArgumentParser(description="Converts a native T5X checkpoint into a PyTorch checkpoint.")
# Required parameters
parser.add_argument(
"--t5x_checkpoint_path", default=None, type=str, required=True, help="Path to the T5X checkpoint."
)
parser.add_argument(
"--config_file",
default=None,
type=str,
required=True,
help="The config json file corresponding to the pre-trained T5 model.\nThis specifies the model architecture.",
)
parser.add_argument(
"--pytorch_dump_path", default=None, type=str, required=True, help="Path to the output PyTorch model."
)
parser.add_argument(
"--is_encoder_only", action="store_true", help="Check if the model is encoder-decoder model", default=False
)
parser.add_argument(
"--scalable_attention",
action="store_true",
help="Whether the model uses scaled attention (umt5 model)",
default=False,
)
args = parser.parse_args()
convert_t5x_checkpoint_to_pytorch(
args.t5x_checkpoint_path,
args.config_file,
args.pytorch_dump_path,
args.is_encoder_only,
args.scalable_attention,
)
| 12,070 | 42.894545 | 119 | py |
transformers | transformers-main/src/transformers/models/umt5/modeling_umt5.py | # coding=utf-8
# Copyright 2023 Mesh TensorFlow authors, T5 Authors and HuggingFace Inc. team.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
""" PyTorch UMT5 model."""
import copy
import math
from typing import Optional, Tuple, Union
import torch
from torch import nn
from torch.nn import CrossEntropyLoss
from torch.utils.checkpoint import checkpoint
from ...activations import ACT2FN
from ...modeling_outputs import (
BaseModelOutput,
BaseModelOutputWithPastAndCrossAttentions,
Seq2SeqLMOutput,
Seq2SeqModelOutput,
Seq2SeqQuestionAnsweringModelOutput,
)
from ...modeling_utils import PreTrainedModel
from ...utils import (
DUMMY_INPUTS,
DUMMY_MASK,
add_start_docstrings,
add_start_docstrings_to_model_forward,
is_torch_fx_proxy,
logging,
replace_return_docstrings,
)
from .configuration_umt5 import UMT5Config
logger = logging.get_logger(__name__)
_CONFIG_FOR_DOC = "UMT5Config"
_CHECKPOINT_FOR_DOC = "google/umt5-small"
# Copied from transformers.models.t5.modeling_t5.T5LayerNorm with T5->UMT5
class UMT5LayerNorm(nn.Module):
def __init__(self, hidden_size, eps=1e-6):
"""
Construct a layernorm module in the UMT5 style. No bias and no subtraction of mean.
"""
super().__init__()
self.weight = nn.Parameter(torch.ones(hidden_size))
self.variance_epsilon = eps
def forward(self, hidden_states):
# UMT5 uses a layer_norm which only scales and doesn't shift, which is also known as Root Mean
# Square Layer Normalization https://arxiv.org/abs/1910.07467 thus varience is calculated
# w/o mean and there is no bias. Additionally we want to make sure that the accumulation for
# half-precision inputs is done in fp32
variance = hidden_states.to(torch.float32).pow(2).mean(-1, keepdim=True)
hidden_states = hidden_states * torch.rsqrt(variance + self.variance_epsilon)
# convert into half-precision if necessary
if self.weight.dtype in [torch.float16, torch.bfloat16]:
hidden_states = hidden_states.to(self.weight.dtype)
return self.weight * hidden_states
# Copied from transformers.models.t5.modeling_t5.T5DenseActDense with T5->UMT5
class UMT5DenseActDense(nn.Module):
def __init__(self, config: UMT5Config):
super().__init__()
self.wi = nn.Linear(config.d_model, config.d_ff, bias=False)
self.wo = nn.Linear(config.d_ff, config.d_model, bias=False)
self.dropout = nn.Dropout(config.dropout_rate)
self.act = ACT2FN[config.dense_act_fn]
def forward(self, hidden_states):
hidden_states = self.wi(hidden_states)
hidden_states = self.act(hidden_states)
hidden_states = self.dropout(hidden_states)
if (
isinstance(self.wo.weight, torch.Tensor)
and hidden_states.dtype != self.wo.weight.dtype
and self.wo.weight.dtype != torch.int8
):
hidden_states = hidden_states.to(self.wo.weight.dtype)
hidden_states = self.wo(hidden_states)
return hidden_states
# Copied from transformers.models.t5.modeling_t5.T5DenseGatedActDense with T5->UMT5
class UMT5DenseGatedActDense(nn.Module):
def __init__(self, config: UMT5Config):
super().__init__()
self.wi_0 = nn.Linear(config.d_model, config.d_ff, bias=False)
self.wi_1 = nn.Linear(config.d_model, config.d_ff, bias=False)
self.wo = nn.Linear(config.d_ff, config.d_model, bias=False)
self.dropout = nn.Dropout(config.dropout_rate)
self.act = ACT2FN[config.dense_act_fn]
def forward(self, hidden_states):
hidden_gelu = self.act(self.wi_0(hidden_states))
hidden_linear = self.wi_1(hidden_states)
hidden_states = hidden_gelu * hidden_linear
hidden_states = self.dropout(hidden_states)
# To make 8bit quantization work for google/flan-t5-xxl, self.wo is kept in float32.
# See https://github.com/huggingface/transformers/issues/20287
# we also make sure the weights are not in `int8` in case users will force `_keep_in_fp32_modules` to be `None``
if (
isinstance(self.wo.weight, torch.Tensor)
and hidden_states.dtype != self.wo.weight.dtype
and self.wo.weight.dtype != torch.int8
):
hidden_states = hidden_states.to(self.wo.weight.dtype)
hidden_states = self.wo(hidden_states)
return hidden_states
# Copied from transformers.models.t5.modeling_t5.T5LayerFF with T5->UMT5
class UMT5LayerFF(nn.Module):
def __init__(self, config: UMT5Config):
super().__init__()
if config.is_gated_act:
self.DenseReluDense = UMT5DenseGatedActDense(config)
else:
self.DenseReluDense = UMT5DenseActDense(config)
self.layer_norm = UMT5LayerNorm(config.d_model, eps=config.layer_norm_epsilon)
self.dropout = nn.Dropout(config.dropout_rate)
def forward(self, hidden_states):
forwarded_states = self.layer_norm(hidden_states)
forwarded_states = self.DenseReluDense(forwarded_states)
hidden_states = hidden_states + self.dropout(forwarded_states)
return hidden_states
class UMT5Attention(nn.Module):
"""
T5's attention using relative_attention_bias.
"""
def __init__(self, config, has_relative_attention_bias=False):
super().__init__()
self.is_decoder = config.is_decoder
self.has_relative_attention_bias = has_relative_attention_bias
self.relative_attention_num_buckets = config.relative_attention_num_buckets
self.relative_attention_max_distance = config.relative_attention_max_distance
self.d_model = config.d_model
self.key_value_proj_dim = config.d_kv
self.n_heads = config.num_heads
self.dropout = config.dropout_rate
self.inner_dim = self.n_heads * self.key_value_proj_dim
# Mesh TensorFlow initialization to avoid scaling before softmax
self.q = nn.Linear(self.d_model, self.inner_dim, bias=False)
self.k = nn.Linear(self.d_model, self.inner_dim, bias=False)
self.v = nn.Linear(self.d_model, self.inner_dim, bias=False)
self.o = nn.Linear(self.inner_dim, self.d_model, bias=False)
if self.has_relative_attention_bias:
self.relative_attention_bias = nn.Embedding(self.relative_attention_num_buckets, self.n_heads)
self.pruned_heads = set()
def _shape(self, projection: torch.Tensor) -> torch.Tensor:
new_projection_shape = projection.size()[:-1] + (self.n_heads, self.key_value_proj_dim)
# move heads to 2nd position (B, T, H * D) -> (B, T, H, D) -> (B, H, T, D)
new_projection = projection.view(new_projection_shape).permute(0, 2, 1, 3)
return new_projection
def _relative_position_bucket(self, relative_position):
"""
Adapted from Mesh Tensorflow:
https://github.com/tensorflow/mesh/blob/0cb87fe07da627bf0b7e60475d59f95ed6b5be3d/mesh_tensorflow/transformer/transformer_layers.py#L593
Translate relative position to a bucket number for relative attention. The relative position is defined as
memory_position - query_position, i.e. the distance in tokens from the attending position to the attended-to
position. If bidirectional=False, then positive relative positions are invalid. We use smaller buckets for
small absolute relative_position and larger buckets for larger absolute relative_positions. All relative
positions >=max_distance map to the same bucket. All relative positions <=-max_distance map to the same bucket.
This should allow for more graceful generalization to longer sequences than the model has been trained on
Args:
relative_position: an int32 Tensor
bidirectional: a boolean - whether the attention is bidirectional
num_buckets: an integer
max_distance: an integer
Returns:
a Tensor with the same shape as relative_position, containing int32 values in the range [0, num_buckets)
"""
relative_buckets = 0
num_buckets = self.relative_attention_num_buckets
max_distance = self.relative_attention_max_distance
if not self.is_decoder:
num_buckets //= 2
relative_buckets += (relative_position > 0).to(torch.long) * num_buckets
relative_position = torch.abs(relative_position)
else:
relative_position = -torch.min(relative_position, torch.zeros_like(relative_position))
# now relative_position is in the range [0, inf)
# half of the buckets are for exact increments in positions
max_exact = num_buckets // 2
is_small = relative_position < max_exact
# The other half of the buckets are for logarithmically bigger bins in positions up to max_distance
log_ratio = torch.log(relative_position.float() / max_exact) / math.log(max_distance / max_exact)
log_ratio = log_ratio * (num_buckets - max_exact)
relative_position_if_large = max_exact + log_ratio.to(torch.long)
relative_position_if_large = torch.min(
relative_position_if_large, torch.full_like(relative_position_if_large, num_buckets - 1)
)
relative_buckets += torch.where(is_small, relative_position, relative_position_if_large)
return relative_buckets
def compute_bias(self, query_length, key_length, device=None):
"""Compute binned relative position bias"""
if device is None:
device = self.relative_attention_bias.weight.device
context_position = torch.arange(query_length, dtype=torch.long, device=device)[:, None]
memory_position = torch.arange(key_length, dtype=torch.long, device=device)[None, :]
relative_position = memory_position - context_position # shape (query_length, key_length)
relative_position_bucket = self._relative_position_bucket(relative_position)
values = self.relative_attention_bias(relative_position_bucket) # shape (query_length, key_length, num_heads)
values = values.permute([2, 0, 1]).unsqueeze(0) # shape (1, num_heads, query_length, key_length)
return values
def forward(
self,
hidden_states: torch.Tensor,
encoder_hidden_states: Optional[torch.Tensor] = None,
past_key_value: Optional[Tuple[torch.Tensor]] = None,
attention_mask: Optional[torch.Tensor] = None,
layer_head_mask: Optional[torch.Tensor] = None,
):
is_cross_attention = encoder_hidden_states is not None
batch_size, seq_length = hidden_states.shape[:2]
# use encoder_hidden_states if cross attention
current_states = encoder_hidden_states if encoder_hidden_states is not None else hidden_states
# checking that the `sequence_length` of the `past_key_value` is the same as the he provided
# `encoder_hidden_states` to support prefix tuning
if is_cross_attention and past_key_value and past_key_value[0].shape[2] == current_states.shape[1]:
# reuse k,v, cross_attentions
key_states = past_key_value[0]
value_states = past_key_value[1]
else:
key_states = self._shape(self.k(current_states))
value_states = self._shape(self.v(current_states))
if past_key_value is not None and not is_cross_attention:
# reuse k, v, self_attention
key_states = torch.cat([past_key_value[0], key_states], dim=2)
value_states = torch.cat([past_key_value[1], value_states], dim=2)
query_states = self._shape(self.q(hidden_states))
attention_scores = torch.matmul(query_states, key_states.transpose(-1, -2))
# compute positional bias
if self.has_relative_attention_bias:
query_length = seq_length
if past_key_value is not None:
query_length += past_key_value[0].shape[2]
position_bias = self.compute_bias(query_length, key_states.size(2), device=attention_scores.device)
else:
position_bias = torch.zeros(
(1, self.n_heads, seq_length, key_states.size(2)),
device=attention_scores.device,
dtype=attention_scores.dtype,
requires_grad=self.training,
)
if past_key_value is not None:
position_bias = position_bias[:, :, -hidden_states.size(1) :, :]
if attention_mask is not None:
position_bias = position_bias + attention_mask # (batch_size, n_heads, seq_length, key_length)
if self.is_decoder:
# if cross_attention save Tuple(torch.Tensor, torch.Tensor) of all cross attention key/value_states.
# Further calls to cross_attention layer can then reuse all cross-attention
# key/value_states (first "if" case)
# if uni-directional self-attention (decoder) save Tuple(torch.Tensor, torch.Tensor) of
# all previous decoder key/value_states. Further calls to uni-directional self-attention
# can concat previous decoder key/value_states to current projected key/value_states (third "elif" case)
# if encoder bi-directional self-attention `past_key_value` is always `None`
past_key_value = (key_states, value_states)
attention_scores += position_bias
# (batch_size, n_heads, seq_length, key_length)
attn_weights = nn.functional.softmax(attention_scores.float(), dim=-1).type_as(attention_scores)
attn_weights = nn.functional.dropout(attn_weights, p=self.dropout, training=self.training)
# Mask heads if we want to
if layer_head_mask is not None:
attn_weights = attn_weights * layer_head_mask
# attn_output = torch.bmm(attn_probs, value_states) ?
context_states = torch.matmul(attn_weights, value_states)
# attn_output = attn_output.view(bsz, self.num_heads, tgt_len, self.head_dim) ?
context_states = context_states.permute(0, 2, 1, 3).contiguous().view(batch_size, seq_length, -1)
attn_output = self.o(context_states)
return attn_output, attn_weights, past_key_value
class UMT5LayerSelfAttention(nn.Module):
def __init__(self, config):
super().__init__()
self.SelfAttention = UMT5Attention(config, has_relative_attention_bias=True)
self.layer_norm = UMT5LayerNorm(config.d_model, eps=config.layer_norm_epsilon)
self.dropout = nn.Dropout(config.dropout_rate)
def forward(
self,
hidden_states,
attention_mask=None,
layer_head_mask=None,
past_key_value=None,
):
normed_hidden_states = self.layer_norm(hidden_states)
attention_output = self.SelfAttention(
normed_hidden_states,
attention_mask=attention_mask,
layer_head_mask=layer_head_mask,
past_key_value=past_key_value,
)
hidden_states = hidden_states + self.dropout(attention_output[0])
outputs = (hidden_states,) + attention_output[1:] # add attentions if we output them
return outputs
class UMT5LayerCrossAttention(nn.Module):
def __init__(self, config):
super().__init__()
self.EncDecAttention = UMT5Attention(config, has_relative_attention_bias=False)
self.layer_norm = UMT5LayerNorm(config.d_model, eps=config.layer_norm_epsilon)
self.dropout = nn.Dropout(config.dropout_rate)
def forward(
self,
hidden_states,
encoder_hidden_states=None,
attention_mask=None,
layer_head_mask=None,
past_key_value=None,
):
normed_hidden_states = self.layer_norm(hidden_states)
attention_output = self.EncDecAttention(
normed_hidden_states,
encoder_hidden_states=encoder_hidden_states,
attention_mask=attention_mask,
layer_head_mask=layer_head_mask,
past_key_value=past_key_value,
)
layer_output = hidden_states + self.dropout(attention_output[0])
outputs = (layer_output,) + attention_output[1:] # add attentions if we output them
return outputs
class UMT5Block(nn.Module):
def __init__(self, config):
super().__init__()
self.is_decoder = config.is_decoder
self.layer = nn.ModuleList()
self.layer.append(UMT5LayerSelfAttention(config))
if self.is_decoder:
self.layer.append(UMT5LayerCrossAttention(config))
self.layer.append(UMT5LayerFF(config))
def forward(
self,
hidden_states,
attention_mask=None,
encoder_hidden_states=None,
encoder_attention_mask=None,
layer_head_mask=None,
cross_attn_layer_head_mask=None,
past_key_value=None,
use_cache=False,
output_attentions=False,
):
# Self Attention
# decoder uni-directional self-attention cached key/values tuple is at positions 1,2
self_attn_past_key_value = past_key_value[:2] if past_key_value is not None else None
hidden_states, self_attn_weights, present_key_value = self.layer[0](
hidden_states,
attention_mask=attention_mask,
layer_head_mask=layer_head_mask,
past_key_value=self_attn_past_key_value,
)
# clamp inf values to enable fp16 training
if hidden_states.dtype == torch.float16:
max_dtype = torch.finfo(hidden_states.dtype).max
clamp_value = torch.where(torch.isinf(hidden_states).any(), max_dtype - 1000, max_dtype)
hidden_states = torch.clamp(hidden_states, min=-clamp_value, max=clamp_value)
# Cross-Attention Block
cross_attn_present_key_value = None
cross_attn_weights = None
do_cross_attention = self.is_decoder and encoder_hidden_states is not None
if do_cross_attention:
# cross_attn cached key/values tuple is at positions 3,4 of present_key_value tuple
cross_attn_past_key_value = past_key_value[-2:] if past_key_value is not None else None
hidden_states, cross_attn_weights, cross_attn_present_key_value = self.layer[1](
hidden_states,
encoder_hidden_states=encoder_hidden_states,
attention_mask=encoder_attention_mask,
layer_head_mask=cross_attn_layer_head_mask,
past_key_value=cross_attn_past_key_value,
)
# clamp inf values to enable fp16 training
if hidden_states.dtype == torch.float16:
max_dtype = torch.finfo(hidden_states.dtype).max
clamp_value = torch.where(torch.isinf(hidden_states).any(), max_dtype - 1000, max_dtype)
hidden_states = torch.clamp(hidden_states, min=-clamp_value, max=clamp_value)
present_key_value += cross_attn_present_key_value
# Apply Feed Forward layer
hidden_states = self.layer[-1](hidden_states)
# clamp inf values to enable fp16 training
if hidden_states.dtype == torch.float16:
max_dtype = torch.finfo(hidden_states.dtype).max
clamp_value = torch.where(torch.isinf(hidden_states).any(), max_dtype - 1000, max_dtype)
hidden_states = torch.clamp(hidden_states, min=-clamp_value, max=clamp_value)
outputs = (
hidden_states,
present_key_value,
)
if output_attentions:
outputs += (self_attn_weights, cross_attn_weights)
return outputs
class UMT5PreTrainedModel(PreTrainedModel):
"""
An abstract class to handle weights initialization and a simple interface for downloading and loading pretrained
models.
"""
config_class = UMT5Config
base_model_prefix = "transformer"
supports_gradient_checkpointing = True
_no_split_modules = ["UMT5Block"]
_keep_in_fp32_modules = ["wo"]
@property
def dummy_inputs(self):
input_ids = torch.tensor(DUMMY_INPUTS)
input_mask = torch.tensor(DUMMY_MASK)
dummy_inputs = {
"decoder_input_ids": input_ids,
"input_ids": input_ids,
"decoder_attention_mask": input_mask,
}
return dummy_inputs
def _init_weights(self, module):
"""Initialize the weights"""
factor = self.config.initializer_factor # Used for testing weights initialization
if isinstance(module, UMT5LayerNorm):
module.weight.data.fill_(factor * 1.0)
elif isinstance(module, (UMT5Model, UMT5ForConditionalGeneration, UMT5EncoderModel, UMT5ForQuestionAnswering)):
# Mesh TensorFlow embeddings initialization
# See https://github.com/tensorflow/mesh/blob/fa19d69eafc9a482aff0b59ddd96b025c0cb207d/mesh_tensorflow/layers.py#L1624
module.shared.weight.data.normal_(mean=0.0, std=factor * 1.0)
if hasattr(module, "lm_head") and not self.config.tie_word_embeddings:
module.lm_head.weight.data.normal_(mean=0.0, std=factor * 1.0)
if hasattr(module, "qa_outputs"):
module.qa_outputs.weight.data.normal_(mean=0.0, std=factor * ((self.config.d_model) ** -0.5))
module.qa_outputs.bias.data.zero_()
elif isinstance(module, UMT5DenseActDense):
# Mesh TensorFlow FF initialization
# See https://github.com/tensorflow/mesh/blob/master/mesh_tensorflow/transformer/transformer_layers.py#L56
# and https://github.com/tensorflow/mesh/blob/fa19d69eafc9a482aff0b59ddd96b025c0cb207d/mesh_tensorflow/layers.py#L89
module.wi.weight.data.normal_(mean=0.0, std=factor * ((self.config.d_model) ** -0.5))
if hasattr(module.wi, "bias") and module.wi.bias is not None:
module.wi.bias.data.zero_()
module.wo.weight.data.normal_(mean=0.0, std=factor * ((self.config.d_ff) ** -0.5))
if hasattr(module.wo, "bias") and module.wo.bias is not None:
module.wo.bias.data.zero_()
elif isinstance(module, UMT5DenseGatedActDense):
module.wi_0.weight.data.normal_(mean=0.0, std=factor * ((self.config.d_model) ** -0.5))
if hasattr(module.wi_0, "bias") and module.wi_0.bias is not None:
module.wi_0.bias.data.zero_()
module.wi_1.weight.data.normal_(mean=0.0, std=factor * ((self.config.d_model) ** -0.5))
if hasattr(module.wi_1, "bias") and module.wi_1.bias is not None:
module.wi_1.bias.data.zero_()
module.wo.weight.data.normal_(mean=0.0, std=factor * ((self.config.d_ff) ** -0.5))
if hasattr(module.wo, "bias") and module.wo.bias is not None:
module.wo.bias.data.zero_()
elif isinstance(module, UMT5Attention):
# Mesh TensorFlow attention initialization to avoid scaling before softmax
# See https://github.com/tensorflow/mesh/blob/fa19d69eafc9a482aff0b59ddd96b025c0cb207d/mesh_tensorflow/transformer/attention.py#L136
d_model = self.config.d_model
key_value_proj_dim = self.config.d_kv
n_heads = self.config.num_heads
module.q.weight.data.normal_(mean=0.0, std=factor * ((d_model * key_value_proj_dim) ** -0.5))
module.k.weight.data.normal_(mean=0.0, std=factor * (d_model**-0.5))
module.v.weight.data.normal_(mean=0.0, std=factor * (d_model**-0.5))
module.o.weight.data.normal_(mean=0.0, std=factor * ((n_heads * key_value_proj_dim) ** -0.5))
if module.has_relative_attention_bias:
module.relative_attention_bias.weight.data.normal_(mean=0.0, std=factor * ((d_model) ** -0.5))
def _set_gradient_checkpointing(self, module, value=False):
if isinstance(module, (UMT5Attention, UMT5Stack)):
module.gradient_checkpointing = value
def _shift_right(self, input_ids):
decoder_start_token_id = self.config.decoder_start_token_id
pad_token_id = self.config.pad_token_id
if decoder_start_token_id is None:
raise ValueError(
"self.model.config.decoder_start_token_id has to be defined. In UMT5 it is usually set to the pad_token_id."
"See UMT5 docs for more information."
)
# shift inputs to the right
if is_torch_fx_proxy(input_ids):
# Item assignment is not supported natively for proxies.
shifted_input_ids = torch.full(input_ids.shape[:-1] + (1,), decoder_start_token_id)
shifted_input_ids = torch.cat([shifted_input_ids, input_ids[..., :-1]], dim=-1)
else:
shifted_input_ids = input_ids.new_zeros(input_ids.shape)
shifted_input_ids[..., 1:] = input_ids[..., :-1].clone()
shifted_input_ids[..., 0] = decoder_start_token_id
if pad_token_id is None:
raise ValueError("self.model.config.pad_token_id has to be defined.")
# replace possible -100 values in labels by `pad_token_id`
shifted_input_ids.masked_fill_(shifted_input_ids == -100, pad_token_id)
return shifted_input_ids
class UMT5Stack(UMT5PreTrainedModel):
def __init__(self, config, embed_tokens=None):
super().__init__(config)
self.embed_tokens = embed_tokens
self.is_decoder = config.is_decoder
self.block = nn.ModuleList([UMT5Block(config) for i in range(config.num_layers)])
self.final_layer_norm = UMT5LayerNorm(config.d_model, eps=config.layer_norm_epsilon)
self.dropout = nn.Dropout(config.dropout_rate)
# Initialize weights and apply final processing
self.gradient_checkpointing = False
self.post_init()
def get_input_embeddings(self):
return self.embed_tokens
def set_input_embeddings(self, new_embeddings):
self.embed_tokens = new_embeddings
def forward(
self,
input_ids=None,
attention_mask=None,
encoder_hidden_states=None,
encoder_attention_mask=None,
inputs_embeds=None,
head_mask=None,
cross_attn_head_mask=None,
past_key_values=None,
use_cache=None,
output_attentions=None,
output_hidden_states=None,
return_dict=None,
):
use_cache = use_cache if use_cache is not None else self.config.use_cache
output_attentions = output_attentions if output_attentions is not None else self.config.output_attentions
output_hidden_states = (
output_hidden_states if output_hidden_states is not None else self.config.output_hidden_states
)
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
if input_ids is not None and inputs_embeds is not None:
err_msg_prefix = "decoder_" if self.is_decoder else ""
raise ValueError(
f"You cannot specify both {err_msg_prefix}input_ids and {err_msg_prefix}inputs_embeds at the same time"
)
elif input_ids is not None:
input_shape = input_ids.size()
input_ids = input_ids.view(-1, input_shape[-1])
elif inputs_embeds is not None:
input_shape = inputs_embeds.size()[:-1]
else:
err_msg_prefix = "decoder_" if self.is_decoder else ""
raise ValueError(f"You have to specify either {err_msg_prefix}input_ids or {err_msg_prefix}inputs_embeds")
if inputs_embeds is None:
if self.embed_tokens is None:
raise ValueError("You have to initialize the model with valid token embeddings")
inputs_embeds = self.embed_tokens(input_ids)
batch_size, seq_length = input_shape
# required mask seq length can be calculated via length of past
mask_seq_length = past_key_values[0][0].shape[2] + seq_length if past_key_values is not None else seq_length
if use_cache is True:
if not self.is_decoder:
raise ValueError(f"`use_cache` can only be set to `True` if {self} is used as a decoder")
if attention_mask is None:
attention_mask = torch.ones(batch_size, mask_seq_length, device=inputs_embeds.device)
if self.is_decoder and encoder_attention_mask is None and encoder_hidden_states is not None:
encoder_seq_length = encoder_hidden_states.shape[1]
encoder_attention_mask = torch.ones(
batch_size, encoder_seq_length, device=inputs_embeds.device, dtype=torch.long
)
# initialize past_key_values with `None` if past does not exist
if past_key_values is None:
past_key_values = [None] * len(self.block)
# We can provide a self-attention mask of dimensions [batch_size, from_seq_length, to_seq_length]
# ourselves in which case we just need to make it broadcastable to all heads.
extended_attention_mask = self.get_extended_attention_mask(attention_mask, input_shape)
# If a 2D or 3D attention mask is provided for the cross-attention
# we need to make broadcastable to [batch_size, num_heads, seq_length, seq_length]
if self.is_decoder and encoder_hidden_states is not None:
encoder_batch_size, encoder_sequence_length, _ = encoder_hidden_states.size()
encoder_hidden_shape = (encoder_batch_size, encoder_sequence_length)
if encoder_attention_mask is None:
encoder_attention_mask = torch.ones(encoder_hidden_shape, device=inputs_embeds.device)
encoder_extended_attention_mask = self.invert_attention_mask(encoder_attention_mask)
else:
encoder_extended_attention_mask = None
if self.gradient_checkpointing and self.training:
if use_cache:
logger.warning_once(
"`use_cache=True` is incompatible with gradient checkpointing. Setting `use_cache=False`..."
)
use_cache = False
# Prepare head mask if needed
head_mask = self.get_head_mask(head_mask, self.config.num_layers)
cross_attn_head_mask = self.get_head_mask(cross_attn_head_mask, self.config.num_layers)
present_key_value_states = () if use_cache else None
all_hidden_states = () if output_hidden_states else None
all_attentions = () if output_attentions else None
all_cross_attentions = () if output_attentions and self.is_decoder else None
hidden_states = self.dropout(inputs_embeds)
for i, (layer_module, past_key_value) in enumerate(zip(self.block, past_key_values)):
layer_head_mask = head_mask[i]
cross_attn_layer_head_mask = cross_attn_head_mask[i]
if output_hidden_states:
all_hidden_states = all_hidden_states + (hidden_states,)
if self.gradient_checkpointing and self.training:
def create_custom_forward(module):
def custom_forward(*inputs):
return tuple(module(*inputs, use_cache, output_attentions))
return custom_forward
layer_outputs = checkpoint(
create_custom_forward(layer_module),
hidden_states,
extended_attention_mask,
encoder_hidden_states,
encoder_extended_attention_mask,
layer_head_mask,
cross_attn_layer_head_mask,
None, # past_key_value is always None with gradient checkpointing
)
else:
layer_outputs = layer_module(
hidden_states,
attention_mask=extended_attention_mask,
encoder_hidden_states=encoder_hidden_states,
encoder_attention_mask=encoder_extended_attention_mask,
layer_head_mask=layer_head_mask,
cross_attn_layer_head_mask=cross_attn_layer_head_mask,
past_key_value=past_key_value,
use_cache=use_cache,
output_attentions=output_attentions,
)
hidden_states = layer_outputs[0]
if use_cache:
present_key_value_states += (layer_outputs[1],)
if output_attentions:
all_attentions += (layer_outputs[2],)
if self.is_decoder:
all_cross_attentions += (layer_outputs[3],)
hidden_states = self.final_layer_norm(hidden_states)
hidden_states = self.dropout(hidden_states)
# Add last layer
if output_hidden_states:
all_hidden_states = all_hidden_states + (hidden_states,)
if not return_dict:
return tuple(
v
for v in [
hidden_states,
present_key_value_states,
all_hidden_states,
all_attentions,
all_cross_attentions,
]
if v is not None
)
return BaseModelOutputWithPastAndCrossAttentions(
last_hidden_state=hidden_states,
past_key_values=present_key_value_states,
hidden_states=all_hidden_states,
attentions=all_attentions,
cross_attentions=all_cross_attentions,
)
UMT5_START_DOCSTRING = r"""
The UMT5 model was proposed in [Exploring the Limits of Transfer Learning with a Unified Text-to-Text
Transformer](https://arxiv.org/abs/1910.10683) by Colin Raffel, Noam Shazeer, Adam Roberts, Katherine Lee, Sharan
Narang, Michael Matena, Yanqi Zhou, Wei Li, Peter J. Liu. It's an encoder decoder transformer pre-trained in a
text-to-text denoising generative setting.
This model inherits from [`PreTrainedModel`]. Check the superclass documentation for the generic methods the
library implements for all its model (such as downloading or saving, resizing the input embeddings, pruning heads
etc.)
This model is also a PyTorch [torch.nn.Module](https://pytorch.org/docs/stable/nn.html#torch.nn.Module) subclass.
Use it as a regular PyTorch Module and refer to the PyTorch documentation for all matter related to general usage
and behavior.
Parameters:
config ([`UMT5Config`]): Model configuration class with all the parameters of the model.
Initializing with a config file does not load the weights associated with the model, only the
configuration. Check out the [`~PreTrainedModel.from_pretrained`] method to load the model weights.
"""
UMT5_INPUTS_DOCSTRING = r"""
Args:
input_ids (`torch.LongTensor` of shape `(batch_size, sequence_length)`):
Indices of input sequence tokens in the vocabulary. UMT5 is a model with relative position embeddings so
you should be able to pad the inputs on both the right and the left.
Indices can be obtained using [`AutoTokenizer`]. See [`PreTrainedTokenizer.encode`] and
[`PreTrainedTokenizer.__call__`] for detail.
[What are input IDs?](../glossary#input-ids)
To know more on how to prepare `input_ids` for pretraining take a look a [UMT5 Training](./umt5#training).
attention_mask (`torch.FloatTensor` of shape `(batch_size, sequence_length)`, *optional*):
Mask to avoid performing attention on padding token indices. Mask values selected in `[0, 1]`:
- 1 for tokens that are **not masked**,
- 0 for tokens that are **masked**.
[What are attention masks?](../glossary#attention-mask)
decoder_input_ids (`torch.LongTensor` of shape `(batch_size, target_sequence_length)`, *optional*):
Indices of decoder input sequence tokens in the vocabulary.
Indices can be obtained using [`AutoTokenizer`]. See [`PreTrainedTokenizer.encode`] and
[`PreTrainedTokenizer.__call__`] for details.
[What are decoder input IDs?](../glossary#decoder-input-ids)
UMT5 uses the `pad_token_id` as the starting token for `decoder_input_ids` generation. If `past_key_values`
is used, optionally only the last `decoder_input_ids` have to be input (see `past_key_values`).
To know more on how to prepare `decoder_input_ids` for pretraining take a look at [UMT5
Training](./umt5#training).
decoder_attention_mask (`torch.BoolTensor` of shape `(batch_size, target_sequence_length)`, *optional*):
Default behavior: generate a tensor that ignores pad tokens in `decoder_input_ids`. Causal mask will also
be used by default.
head_mask (`torch.FloatTensor` of shape `(num_heads,)` or `(num_layers, num_heads)`, *optional*):
Mask to nullify selected heads of the self-attention modules in the encoder. Mask values selected in `[0,
1]`:
- 1 indicates the head is **not masked**,
- 0 indicates the head is **masked**.
decoder_head_mask (`torch.FloatTensor` of shape `(num_heads,)` or `(num_layers, num_heads)`, *optional*):
Mask to nullify selected heads of the self-attention modules in the decoder. Mask values selected in `[0,
1]`:
- 1 indicates the head is **not masked**,
- 0 indicates the head is **masked**.
cross_attn_head_mask (`torch.Tensor` of shape `(num_heads,)` or `(num_layers, num_heads)`, *optional*):
Mask to nullify selected heads of the cross-attention modules in the decoder. Mask values selected in
`[0, 1]`:
- 1 indicates the head is **not masked**,
- 0 indicates the head is **masked**.
encoder_outputs (`tuple(tuple(torch.FloatTensor)`, *optional*):
Tuple consists of (`last_hidden_state`, `optional`: *hidden_states*, `optional`: *attentions*)
`last_hidden_state` of shape `(batch_size, sequence_length, hidden_size)` is a sequence of hidden states at
the output of the last layer of the encoder. Used in the cross-attention of the decoder.
past_key_values (`tuple(tuple(torch.FloatTensor))` of length `config.n_layers` with each tuple having 4 tensors of shape `(batch_size, num_heads, sequence_length - 1, embed_size_per_head)`):
Contains precomputed key and value hidden states of the attention blocks. Can be used to speed up decoding.
If `past_key_values` are used, the user can optionally input only the last `decoder_input_ids` (those that
don't have their past key value states given to this model) of shape `(batch_size, 1)` instead of all
`decoder_input_ids` of shape `(batch_size, sequence_length)`.
inputs_embeds (`torch.FloatTensor` of shape `(batch_size, sequence_length, hidden_size)`, *optional*):
Optionally, instead of passing `input_ids` you can choose to directly pass an embedded representation. This
is useful if you want more control over how to convert `input_ids` indices into associated vectors than the
model's internal embedding lookup matrix.
decoder_inputs_embeds (`torch.FloatTensor` of shape `(batch_size, target_sequence_length, hidden_size)`, *optional*):
Optionally, instead of passing `decoder_input_ids` you can choose to directly pass an embedded
representation. If `past_key_values` is used, optionally only the last `decoder_inputs_embeds` have to be
input (see `past_key_values`). This is useful if you want more control over how to convert
`decoder_input_ids` indices into associated vectors than the model's internal embedding lookup matrix.
If `decoder_input_ids` and `decoder_inputs_embeds` are both unset, `decoder_inputs_embeds` takes the value
of `inputs_embeds`.
use_cache (`bool`, *optional*):
If set to `True`, `past_key_values` key value states are returned and can be used to speed up decoding (see
`past_key_values`).
output_attentions (`bool`, *optional*):
Whether or not to return the attentions tensors of all attention layers. See `attentions` under returned
tensors for more detail.
output_hidden_states (`bool`, *optional*):
Whether or not to return the hidden states of all layers. See `hidden_states` under returned tensors for
more detail.
return_dict (`bool`, *optional*):
Whether or not to return a [`~utils.ModelOutput`] instead of a plain tuple.
"""
UMT5_ENCODER_INPUTS_DOCSTRING = r"""
Args:
input_ids (`torch.LongTensor` of shape `(batch_size, sequence_length)`):
Indices of input sequence tokens in the vocabulary. UMT5 is a model with relative position embeddings so
you should be able to pad the inputs on both the right and the left.
Indices can be obtained using [`AutoTokenizer`]. See [`PreTrainedTokenizer.encode`] and
[`PreTrainedTokenizer.__call__`] for detail.
To know more on how to prepare `input_ids` for pretraining take a look a [UMT5 Training](./umt5#training).
attention_mask (`torch.FloatTensor` of shape `(batch_size, sequence_length)`, *optional*):
Mask to avoid performing attention on padding token indices. Mask values selected in `[0, 1]`:
- 1 for tokens that are **not masked**,
- 0 for tokens that are **masked**.
[What are attention masks?](../glossary#attention-mask)
head_mask (`torch.FloatTensor` of shape `(num_heads,)` or `(num_layers, num_heads)`, *optional*):
Mask to nullify selected heads of the self-attention modules. Mask values selected in `[0, 1]`:
- 1 indicates the head is **not masked**,
- 0 indicates the head is **masked**.
inputs_embeds (`torch.FloatTensor` of shape `(batch_size, sequence_length, hidden_size)`, *optional*):
Optionally, instead of passing `input_ids` you can choose to directly pass an embedded representation. This
is useful if you want more control over how to convert `input_ids` indices into associated vectors than the
model's internal embedding lookup matrix.
output_attentions (`bool`, *optional*):
Whether or not to return the attentions tensors of all attention layers. See `attentions` under returned
tensors for more detail.
output_hidden_states (`bool`, *optional*):
Whether or not to return the hidden states of all layers. See `hidden_states` under returned tensors for
more detail.
return_dict (`bool`, *optional*):
Whether or not to return a [`~utils.ModelOutput`] instead of a plain tuple.
"""
@add_start_docstrings(
"The bare UMT5 Model transformer outputting raw hidden-states without any specific head on top.",
UMT5_START_DOCSTRING,
)
class UMT5Model(UMT5PreTrainedModel):
r"""
Examples:
```python
>>> from transformers import UMT5Model, AutoTokenizer
>>> model = UMT5Model.from_pretrained("google/umt5-small")
>>> tokenizer = AutoTokenizer.from_pretrained("google/umt5-small")
>>> noisy_text = "UN Offizier sagt, dass weiter <extra_id_0> werden muss in Syrien."
>>> label = "<extra_id_0> verhandelt"
>>> inputs = tokenizer(inputs, return_tensors="pt")
>>> labels = tokenizer(label=label, return_tensors="pt")
>>> outputs = model(input_ids=inputs["input_ids"], decoder_input_ids=labels["input_ids"])
>>> hidden_states = outputs.last_hidden_state
```"""
model_type = "uumt5"
config_class = UMT5Config
_tied_weights_keys = ["encoder.embed_tokens.weight", "decoder.embed_tokens.weight"]
def __init__(self, config):
super().__init__(config)
self.shared = nn.Embedding(config.vocab_size, config.d_model)
encoder_config = copy.deepcopy(config)
encoder_config.is_decoder = False
encoder_config.use_cache = False
encoder_config.is_encoder_decoder = False
self.encoder = UMT5Stack(encoder_config, self.shared)
decoder_config = copy.deepcopy(config)
decoder_config.is_decoder = True
decoder_config.is_encoder_decoder = False
decoder_config.num_layers = config.num_decoder_layers
self.decoder = UMT5Stack(decoder_config, self.shared)
# Initialize weights and apply final processing
self.post_init()
# Copied from transformers.models.t5.modeling_t5.T5Model.get_input_embeddings
def get_input_embeddings(self):
return self.shared
# Copied from transformers.models.t5.modeling_t5.T5Model.set_input_embeddings
def set_input_embeddings(self, new_embeddings):
self.shared = new_embeddings
self.encoder.set_input_embeddings(new_embeddings)
self.decoder.set_input_embeddings(new_embeddings)
# Copied from transformers.models.t5.modeling_t5.T5Model.get_encoder
def get_encoder(self):
return self.encoder
# Copied from transformers.models.t5.modeling_t5.T5Model.get_decoder
def get_decoder(self):
return self.decoder
# Copied from transformers.models.t5.modeling_t5.T5Model._prune_heads
def _prune_heads(self, heads_to_prune):
"""
Prunes heads of the model. heads_to_prune: dict of {layer_num: list of heads to prune in this layer} See base
class PreTrainedModel
"""
for layer, heads in heads_to_prune.items():
self.encoder.layer[layer].attention.prune_heads(heads)
@add_start_docstrings_to_model_forward(UMT5_INPUTS_DOCSTRING)
@replace_return_docstrings(output_type=Seq2SeqModelOutput, config_class=_CONFIG_FOR_DOC)
def forward(
self,
input_ids: Optional[torch.LongTensor] = None,
attention_mask: Optional[torch.FloatTensor] = None,
decoder_input_ids: Optional[torch.LongTensor] = None,
decoder_attention_mask: Optional[torch.BoolTensor] = None,
head_mask: Optional[torch.FloatTensor] = None,
decoder_head_mask: Optional[torch.FloatTensor] = None,
cross_attn_head_mask: Optional[torch.Tensor] = None,
encoder_outputs: Optional[Tuple[Tuple[torch.FloatTensor]]] = None,
past_key_values: Optional[Tuple[Tuple[torch.FloatTensor]]] = None,
inputs_embeds: Optional[torch.Tensor] = None,
decoder_inputs_embeds: Optional[torch.Tensor] = None,
use_cache: Optional[bool] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[Tuple[torch.FloatTensor], Seq2SeqModelOutput]:
r"""
Returns:
Example:
```python
>>> from transformers import AutoTokenizer, UMT5Model
>>> tokenizer = AutoTokenizer.from_pretrained("google/umt5-small")
>>> model = UMT5Model.from_pretrained("google/umt5-small")
>>> input_ids = tokenizer(
... "Studies have been shown that owning a dog is good for you", return_tensors="pt"
... ).input_ids # Batch size 1
>>> decoder_input_ids = tokenizer("Studies show that", return_tensors="pt").input_ids # Batch size 1
>>> # preprocess: Prepend decoder_input_ids with start token which is pad token for UMT5Model.
>>> # This is not needed for torch's UMT5ForConditionalGeneration as it does this internally using labels arg.
>>> decoder_input_ids = model._shift_right(decoder_input_ids)
>>> # forward pass
>>> outputs = model(input_ids=input_ids, decoder_input_ids=decoder_input_ids)
>>> last_hidden_states = outputs.last_hidden_state
```"""
use_cache = use_cache if use_cache is not None else self.config.use_cache
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
# Encode if needed (training, first prediction pass)
if encoder_outputs is None:
encoder_outputs = self.encoder(
input_ids=input_ids,
attention_mask=attention_mask,
inputs_embeds=inputs_embeds,
head_mask=head_mask,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
elif return_dict and not isinstance(encoder_outputs, BaseModelOutput):
encoder_outputs = BaseModelOutput(
last_hidden_state=encoder_outputs[0],
hidden_states=encoder_outputs[1] if len(encoder_outputs) > 1 else None,
attentions=encoder_outputs[2] if len(encoder_outputs) > 2 else None,
)
hidden_states = encoder_outputs[0]
# Decode
decoder_outputs = self.decoder(
input_ids=decoder_input_ids,
attention_mask=decoder_attention_mask,
inputs_embeds=decoder_inputs_embeds,
past_key_values=past_key_values,
encoder_hidden_states=hidden_states,
encoder_attention_mask=attention_mask,
head_mask=decoder_head_mask,
cross_attn_head_mask=cross_attn_head_mask,
use_cache=use_cache,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
if not return_dict:
return decoder_outputs + encoder_outputs
return Seq2SeqModelOutput(
last_hidden_state=decoder_outputs.last_hidden_state,
past_key_values=decoder_outputs.past_key_values,
decoder_hidden_states=decoder_outputs.hidden_states,
decoder_attentions=decoder_outputs.attentions,
cross_attentions=decoder_outputs.cross_attentions,
encoder_last_hidden_state=encoder_outputs.last_hidden_state,
encoder_hidden_states=encoder_outputs.hidden_states,
encoder_attentions=encoder_outputs.attentions,
)
@add_start_docstrings("""UMT5 Model with a `language modeling` head on top.""", UMT5_START_DOCSTRING)
class UMT5ForConditionalGeneration(UMT5PreTrainedModel):
r"""
Examples:
```python
>>> from transformers import UMT5ForConditionalGeneration, AutoTokenizer
>>> model = UMT5ForConditionalGeneration.from_pretrained("google/umt5-small")
>>> tokenizer = AutoTokenizer.from_pretrained("google/umt5-small")
>>> article = "UN Offizier sagt, dass weiter verhandelt werden muss in Syrien."
>>> summary = "Weiter Verhandlung in Syrien."
>>> inputs = tokenizer(article, text_target=summary, return_tensors="pt")
>>> outputs = model(**inputs)
>>> loss = outputs.loss
```"""
model_type = "umt5"
_tied_weights_keys = ["encoder.embed_tokens.weight", "decoder.embed_tokens.weight", "lm_head.weight"]
def __init__(self, config):
super().__init__(config)
self.model_dim = config.d_model
self.shared = nn.Embedding(config.vocab_size, config.d_model)
encoder_config = copy.deepcopy(config)
encoder_config.is_decoder = False
encoder_config.use_cache = False
encoder_config.is_encoder_decoder = False
self.encoder = UMT5Stack(encoder_config, self.shared)
decoder_config = copy.deepcopy(config)
decoder_config.is_decoder = True
decoder_config.is_encoder_decoder = False
decoder_config.num_layers = config.num_decoder_layers
self.decoder = UMT5Stack(decoder_config, self.shared)
self.lm_head = nn.Linear(config.d_model, config.vocab_size, bias=False)
# Initialize weights and apply final processing
self.post_init()
# Copied from transformers.models.t5.modeling_t5.T5ForConditionalGeneration.get_input_embeddings
def get_input_embeddings(self):
return self.shared
# Copied from transformers.models.t5.modeling_t5.T5ForConditionalGeneration.set_input_embeddings
def set_input_embeddings(self, new_embeddings):
self.shared = new_embeddings
self.encoder.set_input_embeddings(new_embeddings)
self.decoder.set_input_embeddings(new_embeddings)
# Copied from transformers.models.t5.modeling_t5.T5ForConditionalGeneration.set_output_embeddings
def set_output_embeddings(self, new_embeddings):
self.lm_head = new_embeddings
# Copied from transformers.models.t5.modeling_t5.T5ForConditionalGeneration.get_output_embeddings
def get_output_embeddings(self):
return self.lm_head
# Copied from transformers.models.t5.modeling_t5.T5ForConditionalGeneration.get_encoder
def get_encoder(self):
return self.encoder
# Copied from transformers.models.t5.modeling_t5.T5ForConditionalGeneration.get_decoder
def get_decoder(self):
return self.decoder
@add_start_docstrings_to_model_forward(UMT5_INPUTS_DOCSTRING)
@replace_return_docstrings(output_type=Seq2SeqLMOutput, config_class=_CONFIG_FOR_DOC)
def forward(
self,
input_ids: Optional[torch.LongTensor] = None,
attention_mask: Optional[torch.FloatTensor] = None,
decoder_input_ids: Optional[torch.LongTensor] = None,
decoder_attention_mask: Optional[torch.BoolTensor] = None,
head_mask: Optional[torch.FloatTensor] = None,
decoder_head_mask: Optional[torch.FloatTensor] = None,
cross_attn_head_mask: Optional[torch.Tensor] = None,
encoder_outputs: Optional[Tuple[Tuple[torch.Tensor]]] = None,
past_key_values: Optional[Tuple[Tuple[torch.Tensor]]] = None,
inputs_embeds: Optional[torch.FloatTensor] = None,
decoder_inputs_embeds: Optional[torch.FloatTensor] = None,
labels: Optional[torch.LongTensor] = None,
use_cache: Optional[bool] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[Tuple[torch.FloatTensor], Seq2SeqLMOutput]:
r"""
labels (`torch.LongTensor` of shape `(batch_size,)`, *optional*):
Labels for computing the sequence classification/regression loss. Indices should be in `[-100, 0, ...,
config.vocab_size - 1]`. All labels set to `-100` are ignored (masked), the loss is only computed for
labels in `[0, ..., config.vocab_size]`
Returns:
Examples:
```python
>>> from transformers import AutoTokenizer, UMT5ForConditionalGeneration
>>> tokenizer = AutoTokenizer.from_pretrained("google/umt5-small")
>>> model = UMT5ForConditionalGeneration.from_pretrained("google/umt5-small")
>>> # training
>>> input_ids = tokenizer("The <extra_id_0> walks in <extra_id_1> park", return_tensors="pt").input_ids
>>> labels = tokenizer("<extra_id_0> cute dog <extra_id_1> the <extra_id_2>", return_tensors="pt").input_ids
>>> outputs = model(input_ids=input_ids, labels=labels)
>>> loss = outputs.loss
>>> logits = outputs.logits
>>> # inference
>>> input_ids = tokenizer("Studies have shown that <extra_id_0> good for you", return_tensors="pt").input_ids
>>> outputs = model.generate(input_ids)
>>> tokenizer.decode(outputs[0], skip_special_tokens=True)
```"""
use_cache = use_cache if use_cache is not None else self.config.use_cache
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
# Encode if needed (training, first prediction pass)
if encoder_outputs is None:
# Convert encoder inputs in embeddings if needed
encoder_outputs = self.encoder(
input_ids=input_ids,
attention_mask=attention_mask,
inputs_embeds=inputs_embeds,
head_mask=head_mask,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
elif return_dict and not isinstance(encoder_outputs, BaseModelOutput):
encoder_outputs = BaseModelOutput(
last_hidden_state=encoder_outputs[0],
hidden_states=encoder_outputs[1] if len(encoder_outputs) > 1 else None,
attentions=encoder_outputs[2] if len(encoder_outputs) > 2 else None,
)
hidden_states = encoder_outputs[0]
if labels is not None and decoder_input_ids is None and decoder_inputs_embeds is None:
# get decoder inputs from shifting lm labels to the right
decoder_input_ids = self._shift_right(labels)
# Decode
decoder_outputs = self.decoder(
input_ids=decoder_input_ids,
attention_mask=decoder_attention_mask,
inputs_embeds=decoder_inputs_embeds,
past_key_values=past_key_values,
encoder_hidden_states=hidden_states,
encoder_attention_mask=attention_mask,
head_mask=decoder_head_mask,
cross_attn_head_mask=cross_attn_head_mask,
use_cache=use_cache,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
sequence_output = decoder_outputs[0]
if self.config.tie_word_embeddings:
# Rescale output before projecting on vocab
# See https://github.com/tensorflow/mesh/blob/fa19d69eafc9a482aff0b59ddd96b025c0cb207d/mesh_tensorflow/transformer/transformer.py#L586
sequence_output = sequence_output * (self.model_dim**-0.5)
lm_logits = self.lm_head(sequence_output)
loss = None
if labels is not None:
loss_fct = CrossEntropyLoss(ignore_index=-100)
# move labels to correct device to enable PP
labels = labels.to(lm_logits.device)
loss = loss_fct(lm_logits.view(-1, lm_logits.size(-1)), labels.view(-1))
if not return_dict:
output = (lm_logits,) + decoder_outputs[1:] + encoder_outputs
return ((loss,) + output) if loss is not None else output
return Seq2SeqLMOutput(
loss=loss,
logits=lm_logits,
past_key_values=decoder_outputs.past_key_values,
decoder_hidden_states=decoder_outputs.hidden_states,
decoder_attentions=decoder_outputs.attentions,
cross_attentions=decoder_outputs.cross_attentions,
encoder_last_hidden_state=encoder_outputs.last_hidden_state,
encoder_hidden_states=encoder_outputs.hidden_states,
encoder_attentions=encoder_outputs.attentions,
)
# Copied from transformers.models.t5.modeling_t5.T5ForConditionalGeneration.prepare_inputs_for_generation
def prepare_inputs_for_generation(
self,
input_ids,
past_key_values=None,
attention_mask=None,
head_mask=None,
decoder_head_mask=None,
decoder_attention_mask=None,
cross_attn_head_mask=None,
use_cache=None,
encoder_outputs=None,
**kwargs,
):
# cut decoder_input_ids if past is used
if past_key_values is not None:
input_ids = input_ids[:, -1:]
return {
"decoder_input_ids": input_ids,
"past_key_values": past_key_values,
"encoder_outputs": encoder_outputs,
"attention_mask": attention_mask,
"head_mask": head_mask,
"decoder_head_mask": decoder_head_mask,
"decoder_attention_mask": decoder_attention_mask,
"cross_attn_head_mask": cross_attn_head_mask,
"use_cache": use_cache,
}
# Copied from transformers.models.t5.modeling_t5.T5ForConditionalGeneration.prepare_decoder_input_ids_from_labels
def prepare_decoder_input_ids_from_labels(self, labels: torch.Tensor):
return self._shift_right(labels)
@staticmethod
def _reorder_cache(past_key_values, beam_idx):
reordered_past = ()
for layer_past in past_key_values:
reordered_past += (tuple(past_state.index_select(0, beam_idx) for past_state in layer_past),)
return reordered_past
@add_start_docstrings(
"The bare UMT5 Model transformer outputting encoder's raw hidden-states without any specific head on top.",
UMT5_START_DOCSTRING,
)
class UMT5EncoderModel(UMT5PreTrainedModel):
r"""
Examples:
```python
>>> from transformers import UMT5EncoderModel, AutoTokenizer
>>> model = UMT5EncoderModel.from_pretrained("google/umt5-small")
>>> tokenizer = AutoTokenizer.from_pretrained("google/umt5-small")
>>> article = "UN Offizier sagt, dass weiter verhandelt werden muss in Syrien."
>>> input_ids = tokenizer(article, return_tensors="pt").input_ids
>>> outputs = model(input_ids)
>>> hidden_state = outputs.last_hidden_state
```"""
model_type = "umt5"
# config_class = UMT5Config
_tied_weights_keys = ["encoder.embed_tokens.weight"]
def __init__(self, config):
super().__init__(config)
self.shared = nn.Embedding(config.vocab_size, config.d_model)
encoder_config = copy.deepcopy(config)
encoder_config.use_cache = False
encoder_config.is_encoder_decoder = False
self.encoder = UMT5Stack(encoder_config, self.shared)
# Initialize weights and apply final processing
self.post_init()
# Copied from transformers.models.t5.modeling_t5.T5EncoderModel.get_input_embeddings
def get_input_embeddings(self):
return self.shared
# Copied from transformers.models.t5.modeling_t5.T5EncoderModel.set_input_embeddings
def set_input_embeddings(self, new_embeddings):
self.shared = new_embeddings
self.encoder.set_input_embeddings(new_embeddings)
# Copied from transformers.models.t5.modeling_t5.T5EncoderModel.get_encoder
def get_encoder(self):
return self.encoder
# Copied from transformers.models.t5.modeling_t5.T5EncoderModel._prune_heads
def _prune_heads(self, heads_to_prune):
"""
Prunes heads of the model. heads_to_prune: dict of {layer_num: list of heads to prune in this layer} See base
class PreTrainedModel
"""
for layer, heads in heads_to_prune.items():
self.encoder.block[layer].layer[0].SelfAttention.prune_heads(heads)
@add_start_docstrings_to_model_forward(UMT5_ENCODER_INPUTS_DOCSTRING)
@replace_return_docstrings(output_type=BaseModelOutput, config_class=_CONFIG_FOR_DOC)
# Copied from transformers.models.t5.modeling_t5.T5EncoderModel.forward with T5->UMT5, t5-small->google/umt5-small
def forward(
self,
input_ids: Optional[torch.LongTensor] = None,
attention_mask: Optional[torch.FloatTensor] = None,
head_mask: Optional[torch.FloatTensor] = None,
inputs_embeds: Optional[torch.FloatTensor] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[Tuple[torch.FloatTensor], BaseModelOutput]:
r"""
Returns:
Example:
```python
>>> from transformers import AutoTokenizer, UMT5EncoderModel
>>> tokenizer = AutoTokenizer.from_pretrained("google/umt5-small")
>>> model = UMT5EncoderModel.from_pretrained("google/umt5-small")
>>> input_ids = tokenizer(
... "Studies have been shown that owning a dog is good for you", return_tensors="pt"
... ).input_ids # Batch size 1
>>> outputs = model(input_ids=input_ids)
>>> last_hidden_states = outputs.last_hidden_state
```"""
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
encoder_outputs = self.encoder(
input_ids=input_ids,
attention_mask=attention_mask,
inputs_embeds=inputs_embeds,
head_mask=head_mask,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
return encoder_outputs
@add_start_docstrings(
"""
UMT5 Model with a span classification head on top for extractive question-answering tasks like SQuAD (linear layers
on top of the hidden-states output to compute `span start logits` and `span end logits`).
""",
UMT5_START_DOCSTRING,
)
class UMT5ForQuestionAnswering(UMT5PreTrainedModel):
_tied_weights_keys = ["encoder.embed_tokens.weight", "decoder.embed_tokens.weight"]
def __init__(self, config):
super().__init__(config)
self.model_dim = config.d_model
self.shared = nn.Embedding(config.vocab_size, config.d_model)
encoder_config = copy.deepcopy(config)
encoder_config.is_decoder = False
encoder_config.use_cache = False
encoder_config.is_encoder_decoder = False
self.encoder = UMT5Stack(encoder_config, self.shared)
decoder_config = copy.deepcopy(config)
decoder_config.is_decoder = True
decoder_config.is_encoder_decoder = False
decoder_config.num_layers = config.num_decoder_layers
self.decoder = UMT5Stack(decoder_config, self.shared)
self.num_labels = config.num_labels
self.qa_outputs = nn.Linear(config.d_model, config.num_labels)
# Initialize weights and apply final processing
self.post_init()
# Copied from transformers.models.t5.modeling_t5.T5ForQuestionAnswering.get_input_embeddings
def get_input_embeddings(self):
return self.shared
# Copied from transformers.models.t5.modeling_t5.T5ForQuestionAnswering.set_input_embeddings
def set_input_embeddings(self, new_embeddings):
self.shared = new_embeddings
self.encoder.set_input_embeddings(new_embeddings)
self.decoder.set_input_embeddings(new_embeddings)
# Copied from transformers.models.t5.modeling_t5.T5ForQuestionAnswering.get_encoder
def get_encoder(self):
return self.encoder
# Copied from transformers.models.t5.modeling_t5.T5ForQuestionAnswering.get_decoder
def get_decoder(self):
return self.decoder
@add_start_docstrings_to_model_forward(UMT5_INPUTS_DOCSTRING)
@replace_return_docstrings(output_type=Seq2SeqQuestionAnsweringModelOutput, config_class=_CONFIG_FOR_DOC)
def forward(
self,
input_ids: Optional[torch.LongTensor] = None,
attention_mask: Optional[torch.FloatTensor] = None,
decoder_input_ids: Optional[torch.LongTensor] = None,
decoder_attention_mask: Optional[torch.BoolTensor] = None,
head_mask: Optional[torch.FloatTensor] = None,
decoder_head_mask: Optional[torch.FloatTensor] = None,
cross_attn_head_mask: Optional[torch.Tensor] = None,
encoder_outputs: Optional[Tuple[Tuple[torch.Tensor]]] = None,
start_positions: Optional[torch.LongTensor] = None,
end_positions: Optional[torch.LongTensor] = None,
inputs_embeds: Optional[torch.FloatTensor] = None,
decoder_inputs_embeds: Optional[torch.FloatTensor] = None,
use_cache: Optional[bool] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[Tuple[torch.FloatTensor], Seq2SeqQuestionAnsweringModelOutput]:
r"""
start_positions (`torch.LongTensor` of shape `(batch_size,)`, *optional*):
Labels for position (index) of the start of the labelled span for computing the token classification loss.
Positions are clamped to the length of the sequence (*sequence_length*). Position outside of the sequence
are not taken into account for computing the loss.
end_positions (`torch.LongTensor` of shape `(batch_size,)`, *optional*):
Labels for position (index) of the end of the labelled span for computing the token classification loss.
Positions are clamped to the length of the sequence (*sequence_length*). Position outside of the sequence
are not taken into account for computing the loss.
Returns:
"""
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
use_cache = use_cache if use_cache is not None else self.config.use_cache
if start_positions is not None and end_positions is not None:
use_cache = False
# Copied from models.bart.modeling_bart.BartModel.forward
# different to other models, T5 automatically creates decoder_input_ids from
# input_ids if no decoder_input_ids are provided
if decoder_input_ids is None and decoder_inputs_embeds is None:
if input_ids is None:
raise ValueError(
"If no `decoder_input_ids` or `decoder_inputs_embeds` are "
"passed, `input_ids` cannot be `None`. Please pass either "
"`input_ids` or `decoder_input_ids` or `decoder_inputs_embeds`."
)
decoder_input_ids = self._shift_right(input_ids)
use_cache = use_cache if use_cache is not None else self.config.use_cache
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
# Encode if needed (training, first prediction pass)
if encoder_outputs is None:
encoder_outputs = self.encoder(
input_ids=input_ids,
attention_mask=attention_mask,
inputs_embeds=inputs_embeds,
head_mask=head_mask,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
elif return_dict and not isinstance(encoder_outputs, BaseModelOutput):
encoder_outputs = BaseModelOutput(
last_hidden_state=encoder_outputs[0],
hidden_states=encoder_outputs[1] if len(encoder_outputs) > 1 else None,
attentions=encoder_outputs[2] if len(encoder_outputs) > 2 else None,
)
hidden_states = encoder_outputs[0]
# Decode
decoder_outputs = self.decoder(
input_ids=decoder_input_ids,
attention_mask=decoder_attention_mask,
inputs_embeds=decoder_inputs_embeds,
past_key_values=None,
encoder_hidden_states=hidden_states,
encoder_attention_mask=attention_mask,
head_mask=decoder_head_mask,
cross_attn_head_mask=cross_attn_head_mask,
use_cache=use_cache,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
sequence_output = decoder_outputs[0]
logits = self.qa_outputs(sequence_output)
start_logits, end_logits = logits.split(1, dim=-1)
start_logits = start_logits.squeeze(-1).contiguous()
end_logits = end_logits.squeeze(-1).contiguous()
total_loss = None
if start_positions is not None and end_positions is not None:
# If we are on multi-GPU, split add a dimension
if len(start_positions.size()) > 1:
start_positions = start_positions.squeeze(-1).to(start_logits.device)
if len(end_positions.size()) > 1:
end_positions = end_positions.squeeze(-1).to(end_logits.device)
# sometimes the start/end positions are outside our model inputs, we ignore these terms
ignored_index = start_logits.size(1)
start_positions = start_positions.clamp(0, ignored_index)
end_positions = end_positions.clamp(0, ignored_index)
loss_fct = CrossEntropyLoss(ignore_index=ignored_index)
start_loss = loss_fct(start_logits, start_positions)
end_loss = loss_fct(end_logits, end_positions)
total_loss = (start_loss + end_loss) / 2
if not return_dict:
output = (start_logits, end_logits) + decoder_outputs[1:] + encoder_outputs
return ((total_loss,) + output) if total_loss is not None else output
return Seq2SeqQuestionAnsweringModelOutput(
loss=total_loss,
start_logits=start_logits,
end_logits=end_logits,
past_key_values=decoder_outputs.past_key_values,
decoder_hidden_states=decoder_outputs.hidden_states,
decoder_attentions=decoder_outputs.attentions,
cross_attentions=decoder_outputs.cross_attentions,
encoder_last_hidden_state=encoder_outputs.last_hidden_state,
encoder_hidden_states=encoder_outputs.hidden_states,
encoder_attentions=encoder_outputs.attentions,
)
| 73,907 | 45.659091 | 198 | py |
transformers | transformers-main/src/transformers/models/umt5/__init__.py | # Copyright 2023 The HuggingFace Team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
from typing import TYPE_CHECKING
from ...utils import OptionalDependencyNotAvailable, _LazyModule, is_torch_available
_import_structure = {"configuration_umt5": ["UMT5Config", "UMT5OnnxConfig"]}
try:
if not is_torch_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
_import_structure["modeling_umt5"] = [
"UMT5EncoderModel",
"UMT5ForConditionalGeneration",
"UMT5ForQuestionAnswering",
"UMT5Model",
"UMT5PreTrainedModel",
]
if TYPE_CHECKING:
from .configuration_umt5 import UMT5Config, UMT5OnnxConfig
try:
if not is_torch_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
from .modeling_umt5 import (
UMT5EncoderModel,
UMT5ForConditionalGeneration,
UMT5ForQuestionAnswering,
UMT5Model,
UMT5PreTrainedModel,
)
else:
import sys
sys.modules[__name__] = _LazyModule(__name__, globals()["__file__"], _import_structure, module_spec=__spec__)
| 1,746 | 29.649123 | 113 | py |
transformers | transformers-main/src/transformers/models/lilt/modeling_lilt.py | # coding=utf-8
# Copyright 2022 The HuggingFace Inc. team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
"""PyTorch LiLT model."""
import math
from typing import Optional, Tuple, Union
import torch
import torch.utils.checkpoint
from torch import nn
from torch.nn import BCEWithLogitsLoss, CrossEntropyLoss, MSELoss
from ...activations import ACT2FN
from ...modeling_outputs import (
BaseModelOutput,
BaseModelOutputWithPooling,
QuestionAnsweringModelOutput,
SequenceClassifierOutput,
TokenClassifierOutput,
)
from ...modeling_utils import PreTrainedModel
from ...pytorch_utils import apply_chunking_to_forward, find_pruneable_heads_and_indices, prune_linear_layer
from ...utils import add_start_docstrings, add_start_docstrings_to_model_forward, logging, replace_return_docstrings
from .configuration_lilt import LiltConfig
logger = logging.get_logger(__name__)
_CONFIG_FOR_DOC = "LiltConfig"
LILT_PRETRAINED_MODEL_ARCHIVE_LIST = [
"SCUT-DLVCLab/lilt-roberta-en-base",
# See all LiLT models at https://huggingface.co/models?filter=lilt
]
class LiltTextEmbeddings(nn.Module):
def __init__(self, config):
super().__init__()
self.word_embeddings = nn.Embedding(config.vocab_size, config.hidden_size, padding_idx=config.pad_token_id)
self.position_embeddings = nn.Embedding(config.max_position_embeddings, config.hidden_size)
self.token_type_embeddings = nn.Embedding(config.type_vocab_size, config.hidden_size)
# self.LayerNorm is not snake-cased to stick with TensorFlow model variable name and be able to load
# any TensorFlow checkpoint file
self.LayerNorm = nn.LayerNorm(config.hidden_size, eps=config.layer_norm_eps)
self.dropout = nn.Dropout(config.hidden_dropout_prob)
# position_ids (1, len position emb) is contiguous in memory and exported when serialized
self.register_buffer(
"position_ids", torch.arange(config.max_position_embeddings).expand((1, -1)), persistent=False
)
self.position_embedding_type = getattr(config, "position_embedding_type", "absolute")
# End copy
self.padding_idx = config.pad_token_id
self.position_embeddings = nn.Embedding(
config.max_position_embeddings, config.hidden_size, padding_idx=self.padding_idx
)
def forward(
self,
input_ids=None,
token_type_ids=None,
position_ids=None,
inputs_embeds=None,
):
if position_ids is None:
if input_ids is not None:
# Create the position ids from the input token ids. Any padded tokens remain padded.
position_ids = self.create_position_ids_from_input_ids(input_ids, self.padding_idx).to(
input_ids.device
)
else:
position_ids = self.create_position_ids_from_inputs_embeds(inputs_embeds)
if input_ids is not None:
input_shape = input_ids.size()
else:
input_shape = inputs_embeds.size()[:-1]
if token_type_ids is None:
token_type_ids = torch.zeros(input_shape, dtype=torch.long, device=self.position_ids.device)
if inputs_embeds is None:
inputs_embeds = self.word_embeddings(input_ids)
token_type_embeddings = self.token_type_embeddings(token_type_ids)
embeddings = inputs_embeds + token_type_embeddings
if self.position_embedding_type == "absolute":
position_embeddings = self.position_embeddings(position_ids)
embeddings += position_embeddings
embeddings = self.LayerNorm(embeddings)
embeddings = self.dropout(embeddings)
return embeddings, position_ids
def create_position_ids_from_input_ids(self, input_ids, padding_idx):
"""
Args:
Replace non-padding symbols with their position numbers. Position numbers begin at padding_idx+1. Padding
symbols are ignored. This is modified from fairseq's `utils.make_positions`.
x: torch.Tensor x:
Returns: torch.Tensor
"""
# The series of casts and type-conversions here are carefully balanced to both work with ONNX export and XLA.
mask = input_ids.ne(padding_idx).int()
incremental_indices = (torch.cumsum(mask, dim=1).type_as(mask)) * mask
return incremental_indices.long() + padding_idx
def create_position_ids_from_inputs_embeds(self, inputs_embeds):
"""
Args:
We are provided embeddings directly. We cannot infer which are padded so just generate sequential position ids.:
inputs_embeds: torch.Tensor
Returns: torch.Tensor
"""
input_shape = inputs_embeds.size()[:-1]
sequence_length = input_shape[1]
position_ids = torch.arange(
self.padding_idx + 1, sequence_length + self.padding_idx + 1, dtype=torch.long, device=inputs_embeds.device
)
return position_ids.unsqueeze(0).expand(input_shape)
class LiltLayoutEmbeddings(nn.Module):
def __init__(self, config):
super().__init__()
# we divide the hidden_size by 6 here as there are 6 different layout embeddings,
# namely left_position, upper_position, right_position, lower_position, height, width
self.x_position_embeddings = nn.Embedding(config.max_2d_position_embeddings, config.hidden_size // 6)
self.y_position_embeddings = nn.Embedding(config.max_2d_position_embeddings, config.hidden_size // 6)
self.h_position_embeddings = nn.Embedding(config.max_2d_position_embeddings, config.hidden_size // 6)
self.w_position_embeddings = nn.Embedding(config.max_2d_position_embeddings, config.hidden_size // 6)
self.padding_idx = config.pad_token_id
self.box_position_embeddings = nn.Embedding(
config.max_position_embeddings,
config.hidden_size // config.channel_shrink_ratio,
padding_idx=self.padding_idx,
)
self.box_linear_embeddings = nn.Linear(
in_features=config.hidden_size, out_features=config.hidden_size // config.channel_shrink_ratio
)
self.LayerNorm = nn.LayerNorm(config.hidden_size // config.channel_shrink_ratio, eps=config.layer_norm_eps)
self.dropout = nn.Dropout(config.hidden_dropout_prob)
def forward(self, bbox=None, position_ids=None):
try:
left_position_embeddings = self.x_position_embeddings(bbox[:, :, 0])
upper_position_embeddings = self.y_position_embeddings(bbox[:, :, 1])
right_position_embeddings = self.x_position_embeddings(bbox[:, :, 2])
lower_position_embeddings = self.y_position_embeddings(bbox[:, :, 3])
except IndexError as e:
raise IndexError("The `bbox` coordinate values should be within 0-1000 range.") from e
h_position_embeddings = self.h_position_embeddings(bbox[:, :, 3] - bbox[:, :, 1])
w_position_embeddings = self.w_position_embeddings(bbox[:, :, 2] - bbox[:, :, 0])
spatial_position_embeddings = torch.cat(
[
left_position_embeddings,
upper_position_embeddings,
right_position_embeddings,
lower_position_embeddings,
h_position_embeddings,
w_position_embeddings,
],
dim=-1,
)
spatial_position_embeddings = self.box_linear_embeddings(spatial_position_embeddings)
box_position_embeddings = self.box_position_embeddings(position_ids)
spatial_position_embeddings = spatial_position_embeddings + box_position_embeddings
spatial_position_embeddings = self.LayerNorm(spatial_position_embeddings)
spatial_position_embeddings = self.dropout(spatial_position_embeddings)
return spatial_position_embeddings
class LiltSelfAttention(nn.Module):
def __init__(self, config, position_embedding_type=None):
super().__init__()
if config.hidden_size % config.num_attention_heads != 0 and not hasattr(config, "embedding_size"):
raise ValueError(
f"The hidden size ({config.hidden_size}) is not a multiple of the number of attention "
f"heads ({config.num_attention_heads})"
)
self.num_attention_heads = config.num_attention_heads
self.attention_head_size = int(config.hidden_size / config.num_attention_heads)
self.all_head_size = self.num_attention_heads * self.attention_head_size
self.query = nn.Linear(config.hidden_size, self.all_head_size)
self.key = nn.Linear(config.hidden_size, self.all_head_size)
self.value = nn.Linear(config.hidden_size, self.all_head_size)
self.layout_query = nn.Linear(
config.hidden_size // config.channel_shrink_ratio, self.all_head_size // config.channel_shrink_ratio
)
self.layout_key = nn.Linear(
config.hidden_size // config.channel_shrink_ratio, self.all_head_size // config.channel_shrink_ratio
)
self.layout_value = nn.Linear(
config.hidden_size // config.channel_shrink_ratio, self.all_head_size // config.channel_shrink_ratio
)
self.dropout = nn.Dropout(config.attention_probs_dropout_prob)
self.position_embedding_type = position_embedding_type or getattr(
config, "position_embedding_type", "absolute"
)
if self.position_embedding_type == "relative_key" or self.position_embedding_type == "relative_key_query":
self.max_position_embeddings = config.max_position_embeddings
self.distance_embedding = nn.Embedding(2 * config.max_position_embeddings - 1, self.attention_head_size)
self.channel_shrink_ratio = config.channel_shrink_ratio
def transpose_for_scores(self, x, r=1):
new_x_shape = x.size()[:-1] + (self.num_attention_heads, self.attention_head_size // r)
x = x.view(*new_x_shape)
return x.permute(0, 2, 1, 3)
def forward(
self,
hidden_states,
layout_inputs,
attention_mask=None,
head_mask=None,
output_attentions=False,
):
layout_value_layer = self.transpose_for_scores(self.layout_value(layout_inputs), r=self.channel_shrink_ratio)
layout_key_layer = self.transpose_for_scores(self.layout_key(layout_inputs), r=self.channel_shrink_ratio)
layout_query_layer = self.transpose_for_scores(self.layout_query(layout_inputs), r=self.channel_shrink_ratio)
mixed_query_layer = self.query(hidden_states)
key_layer = self.transpose_for_scores(self.key(hidden_states))
value_layer = self.transpose_for_scores(self.value(hidden_states))
query_layer = self.transpose_for_scores(mixed_query_layer)
attention_scores = torch.matmul(query_layer, key_layer.transpose(-1, -2))
layout_attention_scores = torch.matmul(layout_query_layer, layout_key_layer.transpose(-1, -2))
if self.position_embedding_type == "relative_key" or self.position_embedding_type == "relative_key_query":
seq_length = hidden_states.size()[1]
position_ids_l = torch.arange(seq_length, dtype=torch.long, device=hidden_states.device).view(-1, 1)
position_ids_r = torch.arange(seq_length, dtype=torch.long, device=hidden_states.device).view(1, -1)
distance = position_ids_l - position_ids_r
positional_embedding = self.distance_embedding(distance + self.max_position_embeddings - 1)
positional_embedding = positional_embedding.to(dtype=query_layer.dtype) # fp16 compatibility
if self.position_embedding_type == "relative_key":
relative_position_scores = torch.einsum("bhld,lrd->bhlr", query_layer, positional_embedding)
attention_scores = attention_scores + relative_position_scores
elif self.position_embedding_type == "relative_key_query":
relative_position_scores_query = torch.einsum("bhld,lrd->bhlr", query_layer, positional_embedding)
relative_position_scores_key = torch.einsum("bhrd,lrd->bhlr", key_layer, positional_embedding)
attention_scores = attention_scores + relative_position_scores_query + relative_position_scores_key
tmp_attention_scores = attention_scores / math.sqrt(self.attention_head_size)
tmp_layout_attention_scores = layout_attention_scores / math.sqrt(
self.attention_head_size // self.channel_shrink_ratio
)
attention_scores = tmp_attention_scores + tmp_layout_attention_scores
layout_attention_scores = tmp_layout_attention_scores + tmp_attention_scores
if attention_mask is not None:
# Apply the attention mask is (precomputed for all layers in BertModel forward() function)
layout_attention_scores = layout_attention_scores + attention_mask
# Normalize the attention scores to probabilities.
layout_attention_probs = nn.Softmax(dim=-1)(layout_attention_scores)
# This is actually dropping out entire tokens to attend to, which might
# seem a bit unusual, but is taken from the original Transformer paper.
layout_attention_probs = self.dropout(layout_attention_probs)
# Mask heads if we want to
if head_mask is not None:
layout_attention_probs = layout_attention_probs * head_mask
layout_context_layer = torch.matmul(layout_attention_probs, layout_value_layer)
layout_context_layer = layout_context_layer.permute(0, 2, 1, 3).contiguous()
new_context_layer_shape = layout_context_layer.size()[:-2] + (self.all_head_size // self.channel_shrink_ratio,)
layout_context_layer = layout_context_layer.view(*new_context_layer_shape)
if attention_mask is not None:
# Apply the attention mask is (precomputed for all layers in RobertaModel forward() function)
attention_scores = attention_scores + attention_mask
# Normalize the attention scores to probabilities.
attention_probs = nn.Softmax(dim=-1)(attention_scores)
# This is actually dropping out entire tokens to attend to, which might
# seem a bit unusual, but is taken from the original Transformer paper.
attention_probs = self.dropout(attention_probs)
# Mask heads if we want to
if head_mask is not None:
attention_probs = attention_probs * head_mask
context_layer = torch.matmul(attention_probs, value_layer)
context_layer = context_layer.permute(0, 2, 1, 3).contiguous()
new_context_layer_shape = context_layer.size()[:-2] + (self.all_head_size,)
context_layer = context_layer.view(*new_context_layer_shape)
outputs = (
((context_layer, layout_context_layer), attention_probs)
if output_attentions
else ((context_layer, layout_context_layer),)
)
return outputs
# Copied from transformers.models.bert.modeling_bert.BertSelfOutput
class LiltSelfOutput(nn.Module):
def __init__(self, config):
super().__init__()
self.dense = nn.Linear(config.hidden_size, config.hidden_size)
self.LayerNorm = nn.LayerNorm(config.hidden_size, eps=config.layer_norm_eps)
self.dropout = nn.Dropout(config.hidden_dropout_prob)
def forward(self, hidden_states: torch.Tensor, input_tensor: torch.Tensor) -> torch.Tensor:
hidden_states = self.dense(hidden_states)
hidden_states = self.dropout(hidden_states)
hidden_states = self.LayerNorm(hidden_states + input_tensor)
return hidden_states
class LiltAttention(nn.Module):
def __init__(self, config, position_embedding_type=None):
super().__init__()
self.self = LiltSelfAttention(config, position_embedding_type=position_embedding_type)
self.output = LiltSelfOutput(config)
self.pruned_heads = set()
ori_hidden_size = config.hidden_size
config.hidden_size = config.hidden_size // config.channel_shrink_ratio
self.layout_output = LiltSelfOutput(config)
config.hidden_size = ori_hidden_size
# Copied from transformers.models.bert.modeling_bert.BertAttention.prune_heads
def prune_heads(self, heads):
if len(heads) == 0:
return
heads, index = find_pruneable_heads_and_indices(
heads, self.self.num_attention_heads, self.self.attention_head_size, self.pruned_heads
)
# Prune linear layers
self.self.query = prune_linear_layer(self.self.query, index)
self.self.key = prune_linear_layer(self.self.key, index)
self.self.value = prune_linear_layer(self.self.value, index)
self.output.dense = prune_linear_layer(self.output.dense, index, dim=1)
# Update hyper params and store pruned heads
self.self.num_attention_heads = self.self.num_attention_heads - len(heads)
self.self.all_head_size = self.self.attention_head_size * self.self.num_attention_heads
self.pruned_heads = self.pruned_heads.union(heads)
def forward(
self,
hidden_states: torch.Tensor,
layout_inputs: torch.Tensor,
attention_mask: Optional[torch.FloatTensor] = None,
head_mask: Optional[torch.FloatTensor] = None,
output_attentions: Optional[bool] = False,
) -> Tuple[torch.Tensor]:
self_outputs = self.self(
hidden_states,
layout_inputs,
attention_mask,
head_mask,
output_attentions,
)
attention_output = self.output(self_outputs[0][0], hidden_states)
layout_attention_output = self.layout_output(self_outputs[0][1], layout_inputs)
outputs = ((attention_output, layout_attention_output),) + self_outputs[1:] # add attentions if we output them
return outputs
# Copied from transformers.models.bert.modeling_bert.BertIntermediate
class LiltIntermediate(nn.Module):
def __init__(self, config):
super().__init__()
self.dense = nn.Linear(config.hidden_size, config.intermediate_size)
if isinstance(config.hidden_act, str):
self.intermediate_act_fn = ACT2FN[config.hidden_act]
else:
self.intermediate_act_fn = config.hidden_act
def forward(self, hidden_states: torch.Tensor) -> torch.Tensor:
hidden_states = self.dense(hidden_states)
hidden_states = self.intermediate_act_fn(hidden_states)
return hidden_states
# Copied from transformers.models.bert.modeling_bert.BertOutput
class LiltOutput(nn.Module):
def __init__(self, config):
super().__init__()
self.dense = nn.Linear(config.intermediate_size, config.hidden_size)
self.LayerNorm = nn.LayerNorm(config.hidden_size, eps=config.layer_norm_eps)
self.dropout = nn.Dropout(config.hidden_dropout_prob)
def forward(self, hidden_states: torch.Tensor, input_tensor: torch.Tensor) -> torch.Tensor:
hidden_states = self.dense(hidden_states)
hidden_states = self.dropout(hidden_states)
hidden_states = self.LayerNorm(hidden_states + input_tensor)
return hidden_states
class LiltLayer(nn.Module):
def __init__(self, config):
super().__init__()
self.chunk_size_feed_forward = config.chunk_size_feed_forward
self.seq_len_dim = 1
self.attention = LiltAttention(config)
self.intermediate = LiltIntermediate(config)
self.output = LiltOutput(config)
ori_hidden_size = config.hidden_size
ori_intermediate_size = config.intermediate_size
config.hidden_size = config.hidden_size // config.channel_shrink_ratio
config.intermediate_size = config.intermediate_size // config.channel_shrink_ratio
self.layout_intermediate = LiltIntermediate(config)
self.layout_output = LiltOutput(config)
config.hidden_size = ori_hidden_size
config.intermediate_size = ori_intermediate_size
def forward(
self,
hidden_states: torch.Tensor,
layout_inputs: torch.Tensor,
attention_mask: Optional[torch.FloatTensor] = None,
head_mask: Optional[torch.FloatTensor] = None,
output_attentions: Optional[bool] = False,
) -> Tuple[torch.Tensor]:
self_attention_outputs = self.attention(
hidden_states,
layout_inputs,
attention_mask,
head_mask,
output_attentions=output_attentions,
)
attention_output = self_attention_outputs[0][0]
layout_attention_output = self_attention_outputs[0][1]
outputs = self_attention_outputs[1:] # add self attentions if we output attention weights
layer_output = apply_chunking_to_forward(
self.feed_forward_chunk, self.chunk_size_feed_forward, self.seq_len_dim, attention_output
)
layout_layer_output = apply_chunking_to_forward(
self.layout_feed_forward_chunk, self.chunk_size_feed_forward, self.seq_len_dim, layout_attention_output
)
outputs = ((layer_output, layout_layer_output),) + outputs
return outputs
# Copied from transformers.models.bert.modeling_bert.BertLayer.feed_forward_chunk
def feed_forward_chunk(self, attention_output):
intermediate_output = self.intermediate(attention_output)
layer_output = self.output(intermediate_output, attention_output)
return layer_output
def layout_feed_forward_chunk(self, attention_output):
intermediate_output = self.layout_intermediate(attention_output)
layer_output = self.layout_output(intermediate_output, attention_output)
return layer_output
class LiltEncoder(nn.Module):
# Copied from transformers.models.bert.modeling_bert.BertEncoder.__init__ with Bert->Lilt
def __init__(self, config):
super().__init__()
self.config = config
self.layer = nn.ModuleList([LiltLayer(config) for _ in range(config.num_hidden_layers)])
self.gradient_checkpointing = False
def forward(
self,
hidden_states: torch.Tensor,
layout_inputs: torch.Tensor,
attention_mask: Optional[torch.FloatTensor] = None,
head_mask: Optional[torch.FloatTensor] = None,
output_attentions: Optional[bool] = False,
output_hidden_states: Optional[bool] = False,
return_dict: Optional[bool] = True,
) -> Union[Tuple[torch.Tensor], BaseModelOutput]:
all_hidden_states = () if output_hidden_states else None
all_self_attentions = () if output_attentions else None
for i, layer_module in enumerate(self.layer):
if output_hidden_states:
all_hidden_states = all_hidden_states + (hidden_states,)
layer_head_mask = head_mask[i] if head_mask is not None else None
if self.gradient_checkpointing and self.training:
def create_custom_forward(module):
def custom_forward(*inputs):
return module(*inputs, output_attentions)
return custom_forward
layer_outputs = torch.utils.checkpoint.checkpoint(
create_custom_forward(layer_module),
hidden_states,
layout_inputs,
attention_mask,
layer_head_mask,
)
else:
layer_outputs = layer_module(
hidden_states,
layout_inputs,
attention_mask,
layer_head_mask,
output_attentions,
)
hidden_states = layer_outputs[0][0]
layout_inputs = layer_outputs[0][1]
if output_attentions:
all_self_attentions = all_self_attentions + (layer_outputs[1],)
if output_hidden_states:
all_hidden_states = all_hidden_states + (hidden_states,)
if not return_dict:
return tuple(
v
for v in [
hidden_states,
all_hidden_states,
all_self_attentions,
]
if v is not None
)
return BaseModelOutput(
last_hidden_state=hidden_states,
hidden_states=all_hidden_states,
attentions=all_self_attentions,
)
# Copied from transformers.models.bert.modeling_bert.BertPooler
class LiltPooler(nn.Module):
def __init__(self, config):
super().__init__()
self.dense = nn.Linear(config.hidden_size, config.hidden_size)
self.activation = nn.Tanh()
def forward(self, hidden_states: torch.Tensor) -> torch.Tensor:
# We "pool" the model by simply taking the hidden state corresponding
# to the first token.
first_token_tensor = hidden_states[:, 0]
pooled_output = self.dense(first_token_tensor)
pooled_output = self.activation(pooled_output)
return pooled_output
# Copied from transformers.models.roberta.modeling_roberta.RobertaPreTrainedModel with Roberta->Lilt,roberta->lilt
class LiltPreTrainedModel(PreTrainedModel):
"""
An abstract class to handle weights initialization and a simple interface for downloading and loading pretrained
models.
"""
config_class = LiltConfig
base_model_prefix = "lilt"
supports_gradient_checkpointing = True
_no_split_modules = []
# Copied from transformers.models.bert.modeling_bert.BertPreTrainedModel._init_weights
def _init_weights(self, module):
"""Initialize the weights"""
if isinstance(module, nn.Linear):
# Slightly different from the TF version which uses truncated_normal for initialization
# cf https://github.com/pytorch/pytorch/pull/5617
module.weight.data.normal_(mean=0.0, std=self.config.initializer_range)
if module.bias is not None:
module.bias.data.zero_()
elif isinstance(module, nn.Embedding):
module.weight.data.normal_(mean=0.0, std=self.config.initializer_range)
if module.padding_idx is not None:
module.weight.data[module.padding_idx].zero_()
elif isinstance(module, nn.LayerNorm):
module.bias.data.zero_()
module.weight.data.fill_(1.0)
def _set_gradient_checkpointing(self, module, value=False):
if isinstance(module, LiltEncoder):
module.gradient_checkpointing = value
LILT_START_DOCSTRING = r"""
This model inherits from [`PreTrainedModel`]. Check the superclass documentation for the generic methods the
library implements for all its model (such as downloading or saving, resizing the input embeddings, pruning heads
etc.)
This model is also a PyTorch [torch.nn.Module](https://pytorch.org/docs/stable/nn.html#torch.nn.Module) subclass.
Use it as a regular PyTorch Module and refer to the PyTorch documentation for all matter related to general usage
and behavior.
Parameters:
config ([`LiltConfig`]): Model configuration class with all the parameters of the
model. Initializing with a config file does not load the weights associated with the model, only the
configuration. Check out the [`~PreTrainedModel.from_pretrained`] method to load the model weights.
"""
LILT_INPUTS_DOCSTRING = r"""
Args:
input_ids (`torch.LongTensor` of shape `({0})`):
Indices of input sequence tokens in the vocabulary.
Indices can be obtained using [`AutoTokenizer`]. See [`PreTrainedTokenizer.encode`] and
[`PreTrainedTokenizer.__call__`] for details.
[What are input IDs?](../glossary#input-ids)
bbox (`torch.LongTensor` of shape `({0}, 4)`, *optional*):
Bounding boxes of each input sequence tokens. Selected in the range `[0,
config.max_2d_position_embeddings-1]`. Each bounding box should be a normalized version in (x0, y0, x1, y1)
format, where (x0, y0) corresponds to the position of the upper left corner in the bounding box, and (x1,
y1) represents the position of the lower right corner. See [Overview](#Overview) for normalization.
attention_mask (`torch.FloatTensor` of shape `({0})`, *optional*):
Mask to avoid performing attention on padding token indices. Mask values selected in `[0, 1]`:
- 1 for tokens that are **not masked**,
- 0 for tokens that are **masked**.
[What are attention masks?](../glossary#attention-mask)
token_type_ids (`torch.LongTensor` of shape `({0})`, *optional*):
Segment token indices to indicate first and second portions of the inputs. Indices are selected in `[0,
1]`:
- 0 corresponds to a *sentence A* token,
- 1 corresponds to a *sentence B* token.
[What are token type IDs?](../glossary#token-type-ids)
position_ids (`torch.LongTensor` of shape `({0})`, *optional*):
Indices of positions of each input sequence tokens in the position embeddings. Selected in the range `[0,
config.max_position_embeddings - 1]`.
[What are position IDs?](../glossary#position-ids)
head_mask (`torch.FloatTensor` of shape `(num_heads,)` or `(num_layers, num_heads)`, *optional*):
Mask to nullify selected heads of the self-attention modules. Mask values selected in `[0, 1]`:
- 1 indicates the head is **not masked**,
- 0 indicates the head is **masked**.
inputs_embeds (`torch.FloatTensor` of shape `({0}, hidden_size)`, *optional*):
Optionally, instead of passing `input_ids` you can choose to directly pass an embedded representation. This
is useful if you want more control over how to convert `input_ids` indices into associated vectors than the
model's internal embedding lookup matrix.
output_attentions (`bool`, *optional*):
Whether or not to return the attentions tensors of all attention layers. See `attentions` under returned
tensors for more detail.
output_hidden_states (`bool`, *optional*):
Whether or not to return the hidden states of all layers. See `hidden_states` under returned tensors for
more detail.
return_dict (`bool`, *optional*):
Whether or not to return a [`~utils.ModelOutput`] instead of a plain tuple.
"""
@add_start_docstrings(
"The bare LiLT Model transformer outputting raw hidden-states without any specific head on top.",
LILT_START_DOCSTRING,
)
class LiltModel(LiltPreTrainedModel):
def __init__(self, config, add_pooling_layer=True):
super().__init__(config)
self.config = config
self.embeddings = LiltTextEmbeddings(config)
self.layout_embeddings = LiltLayoutEmbeddings(config)
self.encoder = LiltEncoder(config)
self.pooler = LiltPooler(config) if add_pooling_layer else None
# Initialize weights and apply final processing
self.post_init()
def get_input_embeddings(self):
return self.embeddings.word_embeddings
def set_input_embeddings(self, value):
self.embeddings.word_embeddings = value
def _prune_heads(self, heads_to_prune):
"""
Prunes heads of the model. heads_to_prune: dict of {layer_num: list of heads to prune in this layer} See base
class PreTrainedModel
"""
for layer, heads in heads_to_prune.items():
self.encoder.layer[layer].attention.prune_heads(heads)
@add_start_docstrings_to_model_forward(LILT_INPUTS_DOCSTRING.format("batch_size, sequence_length"))
@replace_return_docstrings(output_type=BaseModelOutputWithPooling, config_class=_CONFIG_FOR_DOC)
def forward(
self,
input_ids: Optional[torch.Tensor] = None,
bbox: Optional[torch.Tensor] = None,
attention_mask: Optional[torch.Tensor] = None,
token_type_ids: Optional[torch.Tensor] = None,
position_ids: Optional[torch.Tensor] = None,
head_mask: Optional[torch.Tensor] = None,
inputs_embeds: Optional[torch.Tensor] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[Tuple[torch.Tensor], BaseModelOutputWithPooling]:
r"""
Returns:
Examples:
```python
>>> from transformers import AutoTokenizer, AutoModel
>>> from datasets import load_dataset
>>> tokenizer = AutoTokenizer.from_pretrained("SCUT-DLVCLab/lilt-roberta-en-base")
>>> model = AutoModel.from_pretrained("SCUT-DLVCLab/lilt-roberta-en-base")
>>> dataset = load_dataset("nielsr/funsd-layoutlmv3", split="train")
>>> example = dataset[0]
>>> words = example["tokens"]
>>> boxes = example["bboxes"]
>>> encoding = tokenizer(words, boxes=boxes, return_tensors="pt")
>>> outputs = model(**encoding)
>>> last_hidden_states = outputs.last_hidden_state
```"""
output_attentions = output_attentions if output_attentions is not None else self.config.output_attentions
output_hidden_states = (
output_hidden_states if output_hidden_states is not None else self.config.output_hidden_states
)
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
if input_ids is not None and inputs_embeds is not None:
raise ValueError("You cannot specify both input_ids and inputs_embeds at the same time")
elif input_ids is not None:
input_shape = input_ids.size()
elif inputs_embeds is not None:
input_shape = inputs_embeds.size()[:-1]
else:
raise ValueError("You have to specify either input_ids or inputs_embeds")
batch_size, seq_length = input_shape
device = input_ids.device if input_ids is not None else inputs_embeds.device
if bbox is None:
bbox = torch.zeros(input_shape + (4,), dtype=torch.long, device=device)
if attention_mask is None:
attention_mask = torch.ones(((batch_size, seq_length)), device=device)
if token_type_ids is None:
if hasattr(self.embeddings, "token_type_ids"):
buffered_token_type_ids = self.embeddings.token_type_ids[:, :seq_length]
buffered_token_type_ids_expanded = buffered_token_type_ids.expand(batch_size, seq_length)
token_type_ids = buffered_token_type_ids_expanded
else:
token_type_ids = torch.zeros(input_shape, dtype=torch.long, device=device)
# We can provide a self-attention mask of dimensions [batch_size, from_seq_length, to_seq_length]
# ourselves in which case we just need to make it broadcastable to all heads.
extended_attention_mask: torch.Tensor = self.get_extended_attention_mask(attention_mask, input_shape)
# Prepare head mask if needed
# 1.0 in head_mask indicate we keep the head
# attention_probs has shape bsz x n_heads x N x N
# input head_mask has shape [num_heads] or [num_hidden_layers x num_heads]
# and head_mask is converted to shape [num_hidden_layers x batch x num_heads x seq_length x seq_length]
head_mask = self.get_head_mask(head_mask, self.config.num_hidden_layers)
embedding_output, position_ids = self.embeddings(
input_ids=input_ids,
position_ids=position_ids,
token_type_ids=token_type_ids,
inputs_embeds=inputs_embeds,
)
layout_embedding_output = self.layout_embeddings(bbox=bbox, position_ids=position_ids)
encoder_outputs = self.encoder(
embedding_output,
layout_embedding_output,
attention_mask=extended_attention_mask,
head_mask=head_mask,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
sequence_output = encoder_outputs[0]
pooled_output = self.pooler(sequence_output) if self.pooler is not None else None
if not return_dict:
return (sequence_output, pooled_output) + encoder_outputs[1:]
return BaseModelOutputWithPooling(
last_hidden_state=sequence_output,
pooler_output=pooled_output,
hidden_states=encoder_outputs.hidden_states,
attentions=encoder_outputs.attentions,
)
@add_start_docstrings(
"""
LiLT Model transformer with a sequence classification/regression head on top (a linear layer on top of the pooled
output) e.g. for GLUE tasks.
""",
LILT_START_DOCSTRING,
)
class LiltForSequenceClassification(LiltPreTrainedModel):
# Copied from transformers.models.roberta.modeling_roberta.RobertaForSequenceClassification.__init__ with Roberta->Lilt, roberta->lilt
def __init__(self, config):
super().__init__(config)
self.num_labels = config.num_labels
self.config = config
self.lilt = LiltModel(config, add_pooling_layer=False)
self.classifier = LiltClassificationHead(config)
# Initialize weights and apply final processing
self.post_init()
@add_start_docstrings_to_model_forward(LILT_INPUTS_DOCSTRING.format("batch_size, sequence_length"))
@replace_return_docstrings(output_type=SequenceClassifierOutput, config_class=_CONFIG_FOR_DOC)
def forward(
self,
input_ids: Optional[torch.LongTensor] = None,
bbox: Optional[torch.Tensor] = None,
attention_mask: Optional[torch.FloatTensor] = None,
token_type_ids: Optional[torch.LongTensor] = None,
position_ids: Optional[torch.LongTensor] = None,
head_mask: Optional[torch.FloatTensor] = None,
inputs_embeds: Optional[torch.FloatTensor] = None,
labels: Optional[torch.LongTensor] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[Tuple[torch.Tensor], SequenceClassifierOutput]:
r"""
labels (`torch.LongTensor` of shape `(batch_size,)`, *optional*):
Labels for computing the sequence classification/regression loss. Indices should be in `[0, ...,
config.num_labels - 1]`. If `config.num_labels == 1` a regression loss is computed (Mean-Square loss), If
`config.num_labels > 1` a classification loss is computed (Cross-Entropy).
Returns:
Examples:
```python
>>> from transformers import AutoTokenizer, AutoModelForSequenceClassification
>>> from datasets import load_dataset
>>> tokenizer = AutoTokenizer.from_pretrained("SCUT-DLVCLab/lilt-roberta-en-base")
>>> model = AutoModelForSequenceClassification.from_pretrained("SCUT-DLVCLab/lilt-roberta-en-base")
>>> dataset = load_dataset("nielsr/funsd-layoutlmv3", split="train")
>>> example = dataset[0]
>>> words = example["tokens"]
>>> boxes = example["bboxes"]
>>> encoding = tokenizer(words, boxes=boxes, return_tensors="pt")
>>> outputs = model(**encoding)
>>> predicted_class_idx = outputs.logits.argmax(-1).item()
>>> predicted_class = model.config.id2label[predicted_class_idx]
```"""
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
outputs = self.lilt(
input_ids,
bbox=bbox,
attention_mask=attention_mask,
token_type_ids=token_type_ids,
position_ids=position_ids,
head_mask=head_mask,
inputs_embeds=inputs_embeds,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
sequence_output = outputs[0]
logits = self.classifier(sequence_output)
loss = None
if labels is not None:
# move labels to correct device to enable model parallelism
labels = labels.to(logits.device)
if self.config.problem_type is None:
if self.num_labels == 1:
self.config.problem_type = "regression"
elif self.num_labels > 1 and (labels.dtype == torch.long or labels.dtype == torch.int):
self.config.problem_type = "single_label_classification"
else:
self.config.problem_type = "multi_label_classification"
if self.config.problem_type == "regression":
loss_fct = MSELoss()
if self.num_labels == 1:
loss = loss_fct(logits.squeeze(), labels.squeeze())
else:
loss = loss_fct(logits, labels)
elif self.config.problem_type == "single_label_classification":
loss_fct = CrossEntropyLoss()
loss = loss_fct(logits.view(-1, self.num_labels), labels.view(-1))
elif self.config.problem_type == "multi_label_classification":
loss_fct = BCEWithLogitsLoss()
loss = loss_fct(logits, labels)
if not return_dict:
output = (logits,) + outputs[2:]
return ((loss,) + output) if loss is not None else output
return SequenceClassifierOutput(
loss=loss,
logits=logits,
hidden_states=outputs.hidden_states,
attentions=outputs.attentions,
)
@add_start_docstrings(
"""
Lilt Model with a token classification head on top (a linear layer on top of the hidden-states output) e.g. for
Named-Entity-Recognition (NER) tasks.
""",
LILT_START_DOCSTRING,
)
class LiltForTokenClassification(LiltPreTrainedModel):
# Copied from transformers.models.roberta.modeling_roberta.RobertaForTokenClassification.__init__ with Roberta->Lilt, roberta->lilt
def __init__(self, config):
super().__init__(config)
self.num_labels = config.num_labels
self.lilt = LiltModel(config, add_pooling_layer=False)
classifier_dropout = (
config.classifier_dropout if config.classifier_dropout is not None else config.hidden_dropout_prob
)
self.dropout = nn.Dropout(classifier_dropout)
self.classifier = nn.Linear(config.hidden_size, config.num_labels)
# Initialize weights and apply final processing
self.post_init()
@add_start_docstrings_to_model_forward(LILT_INPUTS_DOCSTRING.format("batch_size, sequence_length"))
@replace_return_docstrings(output_type=TokenClassifierOutput, config_class=_CONFIG_FOR_DOC)
def forward(
self,
input_ids: Optional[torch.LongTensor] = None,
bbox: Optional[torch.LongTensor] = None,
attention_mask: Optional[torch.FloatTensor] = None,
token_type_ids: Optional[torch.LongTensor] = None,
position_ids: Optional[torch.LongTensor] = None,
head_mask: Optional[torch.FloatTensor] = None,
inputs_embeds: Optional[torch.FloatTensor] = None,
labels: Optional[torch.LongTensor] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[Tuple[torch.Tensor], TokenClassifierOutput]:
r"""
labels (`torch.LongTensor` of shape `(batch_size, sequence_length)`, *optional*):
Labels for computing the token classification loss. Indices should be in `[0, ..., config.num_labels - 1]`.
Returns:
Examples:
```python
>>> from transformers import AutoTokenizer, AutoModelForTokenClassification
>>> from datasets import load_dataset
>>> tokenizer = AutoTokenizer.from_pretrained("SCUT-DLVCLab/lilt-roberta-en-base")
>>> model = AutoModelForTokenClassification.from_pretrained("SCUT-DLVCLab/lilt-roberta-en-base")
>>> dataset = load_dataset("nielsr/funsd-layoutlmv3", split="train")
>>> example = dataset[0]
>>> words = example["tokens"]
>>> boxes = example["bboxes"]
>>> encoding = tokenizer(words, boxes=boxes, return_tensors="pt")
>>> outputs = model(**encoding)
>>> predicted_class_indices = outputs.logits.argmax(-1)
```"""
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
outputs = self.lilt(
input_ids,
bbox=bbox,
attention_mask=attention_mask,
token_type_ids=token_type_ids,
position_ids=position_ids,
head_mask=head_mask,
inputs_embeds=inputs_embeds,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
sequence_output = outputs[0]
sequence_output = self.dropout(sequence_output)
logits = self.classifier(sequence_output)
loss = None
if labels is not None:
# move labels to correct device to enable model parallelism
labels = labels.to(logits.device)
loss_fct = CrossEntropyLoss()
loss = loss_fct(logits.view(-1, self.num_labels), labels.view(-1))
if not return_dict:
output = (logits,) + outputs[2:]
return ((loss,) + output) if loss is not None else output
return TokenClassifierOutput(
loss=loss,
logits=logits,
hidden_states=outputs.hidden_states,
attentions=outputs.attentions,
)
# Copied from transformers.models.roberta.modeling_roberta.RobertaClassificationHead with Roberta->Lilt
class LiltClassificationHead(nn.Module):
"""Head for sentence-level classification tasks."""
def __init__(self, config):
super().__init__()
self.dense = nn.Linear(config.hidden_size, config.hidden_size)
classifier_dropout = (
config.classifier_dropout if config.classifier_dropout is not None else config.hidden_dropout_prob
)
self.dropout = nn.Dropout(classifier_dropout)
self.out_proj = nn.Linear(config.hidden_size, config.num_labels)
def forward(self, features, **kwargs):
x = features[:, 0, :] # take <s> token (equiv. to [CLS])
x = self.dropout(x)
x = self.dense(x)
x = torch.tanh(x)
x = self.dropout(x)
x = self.out_proj(x)
return x
@add_start_docstrings(
"""
Lilt Model with a span classification head on top for extractive question-answering tasks like SQuAD (a linear
layers on top of the hidden-states output to compute `span start logits` and `span end logits`).
""",
LILT_START_DOCSTRING,
)
class LiltForQuestionAnswering(LiltPreTrainedModel):
# Copied from transformers.models.roberta.modeling_roberta.RobertaForQuestionAnswering.__init__ with Roberta->Lilt, roberta->lilt
def __init__(self, config):
super().__init__(config)
self.num_labels = config.num_labels
self.lilt = LiltModel(config, add_pooling_layer=False)
self.qa_outputs = nn.Linear(config.hidden_size, config.num_labels)
# Initialize weights and apply final processing
self.post_init()
@add_start_docstrings_to_model_forward(LILT_INPUTS_DOCSTRING.format("batch_size, sequence_length"))
@replace_return_docstrings(output_type=QuestionAnsweringModelOutput, config_class=_CONFIG_FOR_DOC)
def forward(
self,
input_ids: Optional[torch.LongTensor] = None,
bbox: Optional[torch.LongTensor] = None,
attention_mask: Optional[torch.FloatTensor] = None,
token_type_ids: Optional[torch.LongTensor] = None,
position_ids: Optional[torch.LongTensor] = None,
head_mask: Optional[torch.FloatTensor] = None,
inputs_embeds: Optional[torch.FloatTensor] = None,
start_positions: Optional[torch.LongTensor] = None,
end_positions: Optional[torch.LongTensor] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[Tuple[torch.Tensor], QuestionAnsweringModelOutput]:
r"""
start_positions (`torch.LongTensor` of shape `(batch_size,)`, *optional*):
Labels for position (index) of the start of the labelled span for computing the token classification loss.
Positions are clamped to the length of the sequence (`sequence_length`). Position outside of the sequence
are not taken into account for computing the loss.
end_positions (`torch.LongTensor` of shape `(batch_size,)`, *optional*):
Labels for position (index) of the end of the labelled span for computing the token classification loss.
Positions are clamped to the length of the sequence (`sequence_length`). Position outside of the sequence
are not taken into account for computing the loss.
Returns:
Examples:
```python
>>> from transformers import AutoTokenizer, AutoModelForQuestionAnswering
>>> from datasets import load_dataset
>>> tokenizer = AutoTokenizer.from_pretrained("SCUT-DLVCLab/lilt-roberta-en-base")
>>> model = AutoModelForQuestionAnswering.from_pretrained("SCUT-DLVCLab/lilt-roberta-en-base")
>>> dataset = load_dataset("nielsr/funsd-layoutlmv3", split="train")
>>> example = dataset[0]
>>> words = example["tokens"]
>>> boxes = example["bboxes"]
>>> encoding = tokenizer(words, boxes=boxes, return_tensors="pt")
>>> outputs = model(**encoding)
>>> answer_start_index = outputs.start_logits.argmax()
>>> answer_end_index = outputs.end_logits.argmax()
>>> predict_answer_tokens = encoding.input_ids[0, answer_start_index : answer_end_index + 1]
>>> predicted_answer = tokenizer.decode(predict_answer_tokens)
```"""
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
outputs = self.lilt(
input_ids,
bbox=bbox,
attention_mask=attention_mask,
token_type_ids=token_type_ids,
position_ids=position_ids,
head_mask=head_mask,
inputs_embeds=inputs_embeds,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
sequence_output = outputs[0]
logits = self.qa_outputs(sequence_output)
start_logits, end_logits = logits.split(1, dim=-1)
start_logits = start_logits.squeeze(-1).contiguous()
end_logits = end_logits.squeeze(-1).contiguous()
total_loss = None
if start_positions is not None and end_positions is not None:
# If we are on multi-GPU, split add a dimension
if len(start_positions.size()) > 1:
start_positions = start_positions.squeeze(-1)
if len(end_positions.size()) > 1:
end_positions = end_positions.squeeze(-1)
# sometimes the start/end positions are outside our model inputs, we ignore these terms
ignored_index = start_logits.size(1)
start_positions = start_positions.clamp(0, ignored_index)
end_positions = end_positions.clamp(0, ignored_index)
loss_fct = CrossEntropyLoss(ignore_index=ignored_index)
start_loss = loss_fct(start_logits, start_positions)
end_loss = loss_fct(end_logits, end_positions)
total_loss = (start_loss + end_loss) / 2
if not return_dict:
output = (start_logits, end_logits) + outputs[2:]
return ((total_loss,) + output) if total_loss is not None else output
return QuestionAnsweringModelOutput(
loss=total_loss,
start_logits=start_logits,
end_logits=end_logits,
hidden_states=outputs.hidden_states,
attentions=outputs.attentions,
)
| 53,140 | 43.321101 | 138 | py |
transformers | transformers-main/src/transformers/models/lilt/__init__.py | # Copyright 2022 The HuggingFace Team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
from typing import TYPE_CHECKING
from ...utils import OptionalDependencyNotAvailable, _LazyModule, is_torch_available
_import_structure = {
"configuration_lilt": ["LILT_PRETRAINED_CONFIG_ARCHIVE_MAP", "LiltConfig"],
}
try:
if not is_torch_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
_import_structure["modeling_lilt"] = [
"LILT_PRETRAINED_MODEL_ARCHIVE_LIST",
"LiltForQuestionAnswering",
"LiltForSequenceClassification",
"LiltForTokenClassification",
"LiltModel",
"LiltPreTrainedModel",
]
if TYPE_CHECKING:
from .configuration_lilt import LILT_PRETRAINED_CONFIG_ARCHIVE_MAP, LiltConfig
try:
if not is_torch_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
from .modeling_lilt import (
LILT_PRETRAINED_MODEL_ARCHIVE_LIST,
LiltForQuestionAnswering,
LiltForSequenceClassification,
LiltForTokenClassification,
LiltModel,
LiltPreTrainedModel,
)
else:
import sys
sys.modules[__name__] = _LazyModule(__name__, globals()["__file__"], _import_structure, module_spec=__spec__)
| 1,909 | 30.311475 | 113 | py |
transformers | transformers-main/src/transformers/models/openai/modeling_tf_openai.py | # coding=utf-8
# Copyright 2018 The OpenAI Team Authors and HuggingFace Inc. team.
# Copyright (c) 2018, NVIDIA CORPORATION. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
""" TF 2.0 OpenAI GPT model."""
from __future__ import annotations
from dataclasses import dataclass
from typing import Optional, Tuple, Union
import numpy as np
import tensorflow as tf
from ...activations_tf import get_tf_activation
from ...modeling_tf_outputs import TFBaseModelOutput, TFCausalLMOutput, TFSequenceClassifierOutput
from ...modeling_tf_utils import (
TFCausalLanguageModelingLoss,
TFConv1D,
TFModelInputType,
TFPreTrainedModel,
TFSequenceClassificationLoss,
TFSequenceSummary,
TFSharedEmbeddings,
get_initializer,
keras_serializable,
unpack_inputs,
)
from ...tf_utils import check_embeddings_within_bounds, shape_list, stable_softmax
from ...utils import (
ModelOutput,
add_code_sample_docstrings,
add_start_docstrings,
add_start_docstrings_to_model_forward,
logging,
replace_return_docstrings,
)
from .configuration_openai import OpenAIGPTConfig
logger = logging.get_logger(__name__)
_CHECKPOINT_FOR_DOC = "openai-gpt"
_CONFIG_FOR_DOC = "OpenAIGPTConfig"
TF_OPENAI_GPT_PRETRAINED_MODEL_ARCHIVE_LIST = [
"openai-gpt",
# See all OpenAI GPT models at https://huggingface.co/models?filter=openai-gpt
]
class TFAttention(tf.keras.layers.Layer):
def __init__(self, nx, config, scale=False, **kwargs):
super().__init__(**kwargs)
n_state = nx # in Attention: n_state=768 (nx=n_embd)
# [switch nx => n_state from Block to Attention to keep identical to TF implementation]
assert (
n_state % config.n_head == 0
), f"Hidden dimension {n_state} not dividable by number of heads {config.n_head}"
self.n_head = config.n_head
self.split_size = n_state
self.scale = scale
self.output_attentions = config.output_attentions
self.c_attn = TFConv1D(n_state * 3, nx, initializer_range=config.initializer_range, name="c_attn")
self.c_proj = TFConv1D(n_state, nx, initializer_range=config.initializer_range, name="c_proj")
self.attn_dropout = tf.keras.layers.Dropout(config.attn_pdrop)
self.resid_dropout = tf.keras.layers.Dropout(config.resid_pdrop)
self.pruned_heads = set()
def prune_heads(self, heads):
pass
@staticmethod
def causal_attention_mask(nd, ns):
"""
1's in the lower triangle, counting from the lower right corner. Same as tf.matrix_band_part(tf.ones([nd, ns]),
-1, ns-nd), but doesn't produce garbage on TPUs.
"""
i = tf.range(nd)[:, None]
j = tf.range(ns)
m = i >= j - ns + nd
return m
def _attn(self, q, k, v, attention_mask, head_mask, output_attentions, training=False):
# q, k, v have shape [batch, heads, sequence, features]
w = tf.matmul(q, k, transpose_b=True)
if self.scale:
dk = tf.cast(shape_list(k)[-1], dtype=w.dtype) # scale attention_scores
w = w / tf.math.sqrt(dk)
# w has shape [batch, heads, dst_sequence, src_sequence], where information flows from src to dst.
_, _, nd, ns = shape_list(w)
b = tf.cast(self.causal_attention_mask(nd, ns), dtype=w.dtype)
b = tf.reshape(b, [1, 1, nd, ns])
w = w * b - 1e4 * (1 - b)
if attention_mask is not None:
# Apply the attention mask
attention_mask = tf.cast(attention_mask, dtype=w.dtype)
w = w + attention_mask
w = stable_softmax(w, axis=-1)
w = self.attn_dropout(w, training=training)
# Mask heads if we want to
if head_mask is not None:
w = w * head_mask
outputs = [tf.matmul(w, v)]
if output_attentions:
outputs.append(w)
return outputs
def merge_heads(self, x):
x = tf.transpose(x, [0, 2, 1, 3])
x_shape = shape_list(x)
new_x_shape = x_shape[:-2] + [x_shape[-2] * x_shape[-1]]
return tf.reshape(x, new_x_shape)
def split_heads(self, x):
x_shape = shape_list(x)
new_x_shape = x_shape[:-1] + [self.n_head, x_shape[-1] // self.n_head]
x = tf.reshape(x, new_x_shape)
return tf.transpose(x, (0, 2, 1, 3)) # (batch, head, seq_length, head_features)
def call(self, x, attention_mask, head_mask, output_attentions, training=False):
x = self.c_attn(x)
query, key, value = tf.split(x, 3, axis=2)
query = self.split_heads(query)
key = self.split_heads(key)
value = self.split_heads(value)
attn_outputs = self._attn(query, key, value, attention_mask, head_mask, output_attentions, training=training)
a = attn_outputs[0]
a = self.merge_heads(a)
a = self.c_proj(a)
a = self.resid_dropout(a, training=training)
outputs = [a] + attn_outputs[1:]
return outputs # a, (attentions)
class TFMLP(tf.keras.layers.Layer):
def __init__(self, n_state, config, **kwargs):
super().__init__(**kwargs)
nx = config.n_embd
self.c_fc = TFConv1D(n_state, nx, initializer_range=config.initializer_range, name="c_fc")
self.c_proj = TFConv1D(nx, n_state, initializer_range=config.initializer_range, name="c_proj")
self.act = get_tf_activation("gelu")
self.dropout = tf.keras.layers.Dropout(config.resid_pdrop)
def call(self, x, training=False):
h = self.act(self.c_fc(x))
h2 = self.c_proj(h)
h2 = self.dropout(h2, training=training)
return h2
class TFBlock(tf.keras.layers.Layer):
def __init__(self, config, scale=False, **kwargs):
super().__init__(**kwargs)
nx = config.n_embd
self.attn = TFAttention(nx, config, scale, name="attn")
self.ln_1 = tf.keras.layers.LayerNormalization(epsilon=config.layer_norm_epsilon, name="ln_1")
self.mlp = TFMLP(4 * nx, config, name="mlp")
self.ln_2 = tf.keras.layers.LayerNormalization(epsilon=config.layer_norm_epsilon, name="ln_2")
def call(self, x, attention_mask, head_mask, output_attentions, training=False):
output_attn = self.attn(x, attention_mask, head_mask, output_attentions, training=training)
a = output_attn[0] # output_attn: a, (attentions)
n = self.ln_1(x + a)
m = self.mlp(n, training=training)
h = self.ln_2(n + m)
outputs = [h] + output_attn[1:]
return outputs # x, (attentions)
@keras_serializable
class TFOpenAIGPTMainLayer(tf.keras.layers.Layer):
config_class = OpenAIGPTConfig
def __init__(self, config, *inputs, **kwargs):
super().__init__(*inputs, **kwargs)
self.config = config
self.output_hidden_states = config.output_hidden_states
self.output_attentions = config.output_attentions
self.return_dict = config.use_return_dict
self.num_hidden_layers = config.n_layer
self.n_embd = config.n_embd
self.n_positions = config.n_positions
self.initializer_range = config.initializer_range
self.tokens_embed = TFSharedEmbeddings(
config.vocab_size, config.n_embd, initializer_range=config.initializer_range, name="tokens_embed"
)
self.drop = tf.keras.layers.Dropout(config.embd_pdrop)
self.h = [TFBlock(config, scale=True, name=f"h_._{i}") for i in range(config.n_layer)]
def build(self, input_shape):
with tf.name_scope("positions_embed"):
self.positions_embed = self.add_weight(
name="embeddings",
shape=[self.n_positions, self.n_embd],
initializer=get_initializer(self.initializer_range),
)
super().build(input_shape)
def get_input_embeddings(self):
return self.tokens_embed
def set_input_embeddings(self, value):
self.tokens_embed.weight = value
self.tokens_embed.vocab_size = shape_list(value)[0]
def _prune_heads(self, heads_to_prune):
"""
Prunes heads of the model. heads_to_prune: dict of {layer_num: list of heads to prune in this layer}
"""
raise NotImplementedError
@unpack_inputs
def call(
self,
input_ids: TFModelInputType | None = None,
attention_mask: np.ndarray | tf.Tensor | None = None,
token_type_ids: np.ndarray | tf.Tensor | None = None,
position_ids: np.ndarray | tf.Tensor | None = None,
head_mask: np.ndarray | tf.Tensor | None = None,
inputs_embeds: np.ndarray | tf.Tensor | None = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
training: Optional[bool] = False,
) -> Union[Tuple, TFBaseModelOutput]:
if input_ids is not None and inputs_embeds is not None:
raise ValueError("You cannot specify both input_ids and inputs_embeds at the same time")
elif input_ids is not None:
input_shape = shape_list(input_ids)
input_ids = tf.reshape(input_ids, [-1, input_shape[-1]])
elif inputs_embeds is not None:
input_shape = shape_list(inputs_embeds)[:-1]
else:
raise ValueError("You have to specify either input_ids or inputs_embeds")
if position_ids is None:
position_ids = tf.expand_dims(tf.range(input_shape[-1]), axis=0)
if attention_mask is not None:
# We create a 3D attention mask from a 2D tensor mask.
# Sizes are [batch_size, 1, 1, to_seq_length]
# So we can broadcast to [batch_size, num_heads, from_seq_length, to_seq_length]
# this attention mask is more simple than the triangular masking of causal attention
# used in OpenAI GPT, we just need to prepare the broadcast dimension here.
attention_mask = tf.reshape(attention_mask, (input_shape[0], 1, 1, input_shape[1]))
# Since attention_mask is 1.0 for positions we want to attend and 0.0 for
# masked positions, this operation will create a tensor which is 0.0 for
# positions we want to attend and -10000.0 for masked positions.
# Since we are adding it to the raw scores before the softmax, this is
# effectively the same as removing these entirely.
one_cst = tf.constant(1.0)
attention_mask = tf.cast(attention_mask, dtype=one_cst.dtype)
attention_mask = tf.multiply(tf.subtract(one_cst, attention_mask), tf.constant(-10000.0))
else:
attention_mask = None
# Prepare head mask if needed
# 1.0 in head_mask indicate we keep the head
# attention_probs has shape bsz x n_heads x N x N
# input head_mask has shape [num_heads] or [num_hidden_layers x num_heads]
# and head_mask is converted to shape [num_hidden_layers x batch x num_heads x seq_length x seq_length]
if head_mask is not None:
raise NotImplementedError
else:
head_mask = [None] * self.num_hidden_layers
# head_mask = tf.constant([0] * self.num_hidden_layers)
position_ids = tf.reshape(position_ids, [-1, shape_list(position_ids)[-1]])
if inputs_embeds is None:
check_embeddings_within_bounds(input_ids, self.config.vocab_size)
inputs_embeds = self.tokens_embed(input_ids, mode="embedding")
position_embeds = tf.gather(self.positions_embed, position_ids)
if token_type_ids is not None:
token_type_ids = tf.reshape(token_type_ids, [-1, shape_list(token_type_ids)[-1]])
check_embeddings_within_bounds(token_type_ids, self.config.vocab_size, "token_type_ids")
token_type_embeds = self.tokens_embed(token_type_ids, mode="embedding")
else:
token_type_embeds = 0
hidden_states = inputs_embeds + position_embeds + token_type_embeds
hidden_states = self.drop(hidden_states, training=training)
output_shape = input_shape + [shape_list(hidden_states)[-1]]
all_attentions = () if output_attentions else None
all_hidden_states = () if output_hidden_states else None
for i, block in enumerate(self.h):
if output_hidden_states:
all_hidden_states = all_hidden_states + (tf.reshape(hidden_states, output_shape),)
outputs = block(
hidden_states,
attention_mask,
head_mask[i],
output_attentions,
training=training,
)
hidden_states = outputs[0]
if output_attentions:
all_attentions = all_attentions + (outputs[1],)
hidden_states = tf.reshape(hidden_states, output_shape)
# Add last hidden state
if output_hidden_states:
all_hidden_states = all_hidden_states + (hidden_states,)
if output_attentions:
# let the number of heads free (-1) so we can extract attention even after head pruning
attention_output_shape = input_shape[:-1] + [-1] + shape_list(all_attentions[0])[-2:]
all_attentions = tuple(tf.reshape(t, attention_output_shape) for t in all_attentions)
if not return_dict:
return tuple(v for v in [hidden_states, all_hidden_states, all_attentions] if v is not None)
return TFBaseModelOutput(
last_hidden_state=hidden_states,
hidden_states=all_hidden_states,
attentions=all_attentions,
)
class TFOpenAIGPTPreTrainedModel(TFPreTrainedModel):
"""
An abstract class to handle weights initialization and a simple interface for downloading and loading pretrained
models.
"""
config_class = OpenAIGPTConfig
base_model_prefix = "transformer"
@dataclass
class TFOpenAIGPTDoubleHeadsModelOutput(ModelOutput):
"""
Base class for outputs of models predicting if two sentences are consecutive or not.
Args:
logits (`tf.Tensor` of shape `(batch_size, num_choices, sequence_length, config.vocab_size)`):
Prediction scores of the language modeling head (scores for each vocabulary token before SoftMax).
mc_logits (`tf.Tensor` of shape `(batch_size, num_choices)`):
Prediction scores of the multiple choice classification head (scores for each choice before SoftMax).
hidden_states (`tuple(tf.Tensor)`, *optional*, returned when `output_hidden_states=True` is passed or when `config.output_hidden_states=True`):
Tuple of `tf.Tensor` (one for the output of the embeddings + one for the output of each layer) of shape
`(batch_size, sequence_length, hidden_size)`.
Hidden-states of the model at the output of each layer plus the initial embedding outputs.
attentions (`tuple(tf.Tensor)`, *optional*, returned when `output_attentions=True` is passed or when `config.output_attentions=True`):
Tuple of `tf.Tensor` (one for each layer) of shape `(batch_size, num_heads, sequence_length,
sequence_length)`.
Attentions weights after the attention softmax, used to compute the weighted average in the self-attention
heads.
"""
logits: tf.Tensor = None
mc_logits: tf.Tensor = None
hidden_states: Tuple[tf.Tensor] | None = None
attentions: Tuple[tf.Tensor] | None = None
OPENAI_GPT_START_DOCSTRING = r"""
This model inherits from [`TFPreTrainedModel`]. Check the superclass documentation for the generic methods the
library implements for all its model (such as downloading or saving, resizing the input embeddings, pruning heads
etc.)
This model is also a [tf.keras.Model](https://www.tensorflow.org/api_docs/python/tf/keras/Model) subclass. Use it
as a regular TF 2.0 Keras Model and refer to the TF 2.0 documentation for all matter related to general usage and
behavior.
<Tip>
TensorFlow models and layers in `transformers` accept two formats as input:
- having all inputs as keyword arguments (like PyTorch models), or
- having all inputs as a list, tuple or dict in the first positional argument.
The reason the second format is supported is that Keras methods prefer this format when passing inputs to models
and layers. Because of this support, when using methods like `model.fit()` things should "just work" for you - just
pass your inputs and labels in any format that `model.fit()` supports! If, however, you want to use the second
format outside of Keras methods like `fit()` and `predict()`, such as when creating your own layers or models with
the Keras `Functional` API, there are three possibilities you can use to gather all the input Tensors in the first
positional argument:
- a single Tensor with `input_ids` only and nothing else: `model(input_ids)`
- a list of varying length with one or several input Tensors IN THE ORDER given in the docstring:
`model([input_ids, attention_mask])` or `model([input_ids, attention_mask, token_type_ids])`
- a dictionary with one or several input Tensors associated to the input names given in the docstring:
`model({"input_ids": input_ids, "token_type_ids": token_type_ids})`
Note that when creating models and layers with
[subclassing](https://keras.io/guides/making_new_layers_and_models_via_subclassing/) then you don't need to worry
about any of this, as you can just pass inputs like you would to any other Python function!
</Tip>
Parameters:
config ([`OpenAIGPTConfig`]): Model configuration class with all the parameters of the model.
Initializing with a config file does not load the weights associated with the model, only the
configuration. Check out the [`~PreTrainedModel.from_pretrained`] method to load the model weights.
"""
OPENAI_GPT_INPUTS_DOCSTRING = r"""
Args:
input_ids (`Numpy array` or `tf.Tensor` of shape `(batch_size, sequence_length)`):
Indices of input sequence tokens in the vocabulary.
Indices can be obtained using [`AutoTokenizer`]. See [`PreTrainedTokenizer.__call__`] and
[`PreTrainedTokenizer.encode`] for details.
[What are input IDs?](../glossary#input-ids)
attention_mask (`tf.Tensor` or `Numpy array` of shape `(batch_size, sequence_length)`, *optional*):
Mask to avoid performing attention on padding token indices. Mask values selected in `[0, 1]`:
- 1 for tokens that are **not masked**,
- 0 for tokens that are **masked**.
[What are attention masks?](../glossary#attention-mask)
token_type_ids (`tf.Tensor` or `Numpy array` of shape `(batch_size, sequence_length)`, *optional*):
Segment token indices to indicate first and second portions of the inputs. Indices are selected in `[0,
1]`:
- 0 corresponds to a *sentence A* token,
- 1 corresponds to a *sentence B* token.
[What are token type IDs?](../glossary#token-type-ids)
position_ids (`tf.Tensor` or `Numpy array` of shape `(batch_size, sequence_length)`, *optional*):
Indices of positions of each input sequence tokens in the position embeddings. Selected in the range `[0,
config.max_position_embeddings - 1]`.
[What are position IDs?](../glossary#position-ids)
head_mask (`tf.Tensor` or `Numpy array` of shape `(num_heads,)` or `(num_layers, num_heads)`, *optional*):
Mask to nullify selected heads of the self-attention modules. Mask values selected in `[0, 1]`:
- 1 indicates the head is **not masked**,
- 0 indicates the head is **masked**.
inputs_embeds (`tf.Tensor` or `Numpy array` of shape `(batch_size, sequence_length, hidden_size)`, *optional*):
Optionally, instead of passing `input_ids` you can choose to directly pass an embedded representation. This
is useful if you want more control over how to convert `input_ids` indices into associated vectors than the
model's internal embedding lookup matrix.
output_attentions (`bool`, *optional*):
Whether or not to return the attentions tensors of all attention layers. See `attentions` under returned
tensors for more detail. This argument can be used only in eager mode, in graph mode the value in the
config will be used instead.
output_hidden_states (`bool`, *optional*):
Whether or not to return the hidden states of all layers. See `hidden_states` under returned tensors for
more detail. This argument can be used only in eager mode, in graph mode the value in the config will be
used instead.
return_dict (`bool`, *optional*):
Whether or not to return a [`~utils.ModelOutput`] instead of a plain tuple. This argument can be used in
eager mode, in graph mode the value will always be set to True.
training (`bool`, *optional*, defaults to `False`):
Whether or not to use the model in training mode (some modules like dropout modules have different
behaviors between training and evaluation).
"""
@add_start_docstrings(
"The bare OpenAI GPT transformer model outputting raw hidden-states without any specific head on top.",
OPENAI_GPT_START_DOCSTRING,
)
class TFOpenAIGPTModel(TFOpenAIGPTPreTrainedModel):
def __init__(self, config, *inputs, **kwargs):
super().__init__(config, *inputs, **kwargs)
self.transformer = TFOpenAIGPTMainLayer(config, name="transformer")
@unpack_inputs
@add_start_docstrings_to_model_forward(OPENAI_GPT_INPUTS_DOCSTRING)
@add_code_sample_docstrings(
checkpoint=_CHECKPOINT_FOR_DOC,
output_type=TFBaseModelOutput,
config_class=_CONFIG_FOR_DOC,
)
def call(
self,
input_ids: TFModelInputType | None = None,
attention_mask: np.ndarray | tf.Tensor | None = None,
token_type_ids: np.ndarray | tf.Tensor | None = None,
position_ids: np.ndarray | tf.Tensor | None = None,
head_mask: np.ndarray | tf.Tensor | None = None,
inputs_embeds: np.ndarray | tf.Tensor | None = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
training: Optional[bool] = False,
) -> Union[Tuple, TFBaseModelOutput]:
outputs = self.transformer(
input_ids=input_ids,
attention_mask=attention_mask,
token_type_ids=token_type_ids,
position_ids=position_ids,
head_mask=head_mask,
inputs_embeds=inputs_embeds,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
training=training,
)
return outputs
@add_start_docstrings(
"""
OpenAI GPT Model transformer with a language modeling head on top (linear layer with weights tied to the input
embeddings).
""",
OPENAI_GPT_START_DOCSTRING,
)
class TFOpenAIGPTLMHeadModel(TFOpenAIGPTPreTrainedModel, TFCausalLanguageModelingLoss):
def __init__(self, config, *inputs, **kwargs):
super().__init__(config, *inputs, **kwargs)
self.transformer = TFOpenAIGPTMainLayer(config, name="transformer")
# OpenAIGPT does not have past caching features
self.supports_xla_generation = False
def get_output_embeddings(self):
return self.get_input_embeddings()
def set_output_embeddings(self, value):
self.set_input_embeddings(value)
@unpack_inputs
@add_start_docstrings_to_model_forward(OPENAI_GPT_INPUTS_DOCSTRING)
@add_code_sample_docstrings(
checkpoint=_CHECKPOINT_FOR_DOC,
output_type=TFCausalLMOutput,
config_class=_CONFIG_FOR_DOC,
)
def call(
self,
input_ids: TFModelInputType | None = None,
attention_mask: np.ndarray | tf.Tensor | None = None,
token_type_ids: np.ndarray | tf.Tensor | None = None,
position_ids: np.ndarray | tf.Tensor | None = None,
head_mask: np.ndarray | tf.Tensor | None = None,
inputs_embeds: np.ndarray | tf.Tensor | None = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
labels: np.ndarray | tf.Tensor | None = None,
training: Optional[bool] = False,
) -> Union[Tuple, TFCausalLMOutput]:
r"""
labels (`tf.Tensor` of shape `(batch_size, sequence_length)`, *optional*):
Labels for computing the cross entropy classification loss. Indices should be in `[0, ...,
config.vocab_size - 1]`.
"""
transformer_outputs = self.transformer(
input_ids=input_ids,
attention_mask=attention_mask,
token_type_ids=token_type_ids,
position_ids=position_ids,
head_mask=head_mask,
inputs_embeds=inputs_embeds,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
training=training,
)
hidden_states = transformer_outputs[0]
logits = self.transformer.tokens_embed(hidden_states, mode="linear")
loss = None
if labels is not None:
# shift labels to the left and cut last logit token
shifted_logits = logits[:, :-1]
labels = labels[:, 1:]
loss = self.hf_compute_loss(labels, shifted_logits)
if not return_dict:
output = (logits,) + transformer_outputs[1:]
return ((loss,) + output) if loss is not None else output
return TFCausalLMOutput(
loss=loss,
logits=logits,
hidden_states=transformer_outputs.hidden_states,
attentions=transformer_outputs.attentions,
)
def prepare_inputs_for_generation(self, inputs, **kwargs):
return {"input_ids": inputs}
@add_start_docstrings(
"""
OpenAI GPT Model transformer with a language modeling and a multiple-choice classification head on top e.g. for
RocStories/SWAG tasks. The two heads are two linear layers. The language modeling head has its weights tied to the
input embeddings, the classification head takes as input the input of a specified classification token index in the
input sequence).
""",
OPENAI_GPT_START_DOCSTRING,
)
class TFOpenAIGPTDoubleHeadsModel(TFOpenAIGPTPreTrainedModel):
def __init__(self, config, *inputs, **kwargs):
super().__init__(config, *inputs, **kwargs)
config.num_labels = 1
self.transformer = TFOpenAIGPTMainLayer(config, name="transformer")
self.multiple_choice_head = TFSequenceSummary(
config, initializer_range=config.initializer_range, name="multiple_choice_head"
)
@unpack_inputs
@add_start_docstrings_to_model_forward(OPENAI_GPT_INPUTS_DOCSTRING)
@replace_return_docstrings(output_type=TFOpenAIGPTDoubleHeadsModelOutput, config_class=_CONFIG_FOR_DOC)
def call(
self,
input_ids: TFModelInputType | None = None,
attention_mask: np.ndarray | tf.Tensor | None = None,
token_type_ids: np.ndarray | tf.Tensor | None = None,
position_ids: np.ndarray | tf.Tensor | None = None,
head_mask: np.ndarray | tf.Tensor | None = None,
inputs_embeds: np.ndarray | tf.Tensor | None = None,
mc_token_ids: np.ndarray | tf.Tensor | None = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
training: Optional[bool] = False,
) -> Union[Tuple, TFOpenAIGPTDoubleHeadsModelOutput]:
r"""
mc_token_ids (`tf.Tensor` or `Numpy array` of shape `(batch_size, num_choices)`, *optional*, default to index of the last token of the input):
Index of the classification token in each input sequence. Selected in the range `[0, input_ids.size(-1) -
1]`.
Return:
Examples:
```python
>>> import tensorflow as tf
>>> from transformers import AutoTokenizer, TFOpenAIGPTDoubleHeadsModel
>>> tokenizer = AutoTokenizer.from_pretrained("openai-gpt")
>>> model = TFOpenAIGPTDoubleHeadsModel.from_pretrained("openai-gpt")
>>> # Add a [CLS] to the vocabulary (we should train it also!)
>>> tokenizer.add_special_tokens({"cls_token": "[CLS]"})
>>> model.resize_token_embeddings(len(tokenizer)) # Update the model embeddings with the new vocabulary size
>>> print(tokenizer.cls_token_id, len(tokenizer)) # The newly token the last token of the vocabulary
>>> choices = ["Hello, my dog is cute [CLS]", "Hello, my cat is cute [CLS]"]
>>> encoding = tokenizer(choices, return_tensors="tf")
>>> inputs = {k: tf.expand_dims(v, 0) for k, v in encoding.items()}
>>> inputs["mc_token_ids"] = tf.constant(
... [inputs["input_ids"].shape[-1] - 1, inputs["input_ids"].shape[-1] - 1]
... )[
... None, :
... ] # Batch size 1
>>> outputs = model(inputs)
>>> lm_prediction_scores, mc_prediction_scores = outputs[:2]
```"""
if input_ids is not None:
input_shapes = shape_list(input_ids)
else:
input_shapes = shape_list(inputs_embeds)[:-1]
seq_length = input_shapes[-1]
flat_input_ids = tf.reshape(input_ids, (-1, seq_length)) if input_ids is not None else None
flat_attention_mask = tf.reshape(attention_mask, (-1, seq_length)) if attention_mask is not None else None
flat_token_type_ids = tf.reshape(token_type_ids, (-1, seq_length)) if token_type_ids is not None else None
flat_position_ids = tf.reshape(position_ids, (-1, seq_length)) if position_ids is not None else None
transformer_outputs = self.transformer(
flat_input_ids,
flat_attention_mask,
flat_token_type_ids,
flat_position_ids,
head_mask,
inputs_embeds,
output_attentions,
output_hidden_states,
return_dict=return_dict,
training=training,
)
hidden_states = transformer_outputs[0]
hidden_states = tf.reshape(hidden_states, input_shapes + shape_list(hidden_states)[-1:])
if return_dict and output_hidden_states:
# We do this to match the slightly odd PT behaviour - the final hidden state is reshaped to rank 4 when the
# input is rank 3, but all other hidden states remain at rank-3 (with the first 2 dims merged)
all_hidden_states = transformer_outputs.hidden_states[:-1] + (hidden_states,)
else:
all_hidden_states = None
lm_logits = self.transformer.tokens_embed(hidden_states, mode="linear")
mc_logits = self.multiple_choice_head(hidden_states, mc_token_ids, training=training)
mc_logits = tf.squeeze(mc_logits, axis=-1)
if not return_dict:
return (lm_logits, mc_logits) + transformer_outputs[1:]
return TFOpenAIGPTDoubleHeadsModelOutput(
logits=lm_logits,
mc_logits=mc_logits,
hidden_states=all_hidden_states,
attentions=transformer_outputs.attentions,
)
@property
def input_signature(self):
return {
"input_ids": tf.TensorSpec((None, None, None), tf.int32, name="input_ids"),
"attention_mask": tf.TensorSpec((None, None, None), tf.int32, name="attention_mask"),
"mc_token_ids": tf.TensorSpec((None, None), tf.int32, name="token_type_ids"),
}
@add_start_docstrings(
"""
The OpenAI GPT Model transformer with a sequence classification head on top (linear layer).
[`TFOpenAIGPTForSequenceClassification`] uses the last token in order to do the classification, as other causal
models (e.g. GPT-2) do.
Since it does classification on the last token, it requires to know the position of the last token. If a
`pad_token_id` is defined in the configuration, it finds the last token that is not a padding token in each row. If
no `pad_token_id` is defined, it simply takes the last value in each row of the batch. Since it cannot guess the
padding tokens when `inputs_embeds` are passed instead of `input_ids`, it does the same (take the last value in
each row of the batch).
""",
OPENAI_GPT_START_DOCSTRING,
)
class TFOpenAIGPTForSequenceClassification(TFOpenAIGPTPreTrainedModel, TFSequenceClassificationLoss):
def __init__(self, config, *inputs, **kwargs):
super().__init__(config, *inputs, **kwargs)
self.num_labels = config.num_labels
self.score = tf.keras.layers.Dense(
config.num_labels,
kernel_initializer=get_initializer(config.initializer_range),
name="score",
use_bias=False,
)
self.transformer = TFOpenAIGPTMainLayer(config, name="transformer")
@unpack_inputs
@add_start_docstrings_to_model_forward(OPENAI_GPT_INPUTS_DOCSTRING)
@add_code_sample_docstrings(
checkpoint=_CHECKPOINT_FOR_DOC,
output_type=TFSequenceClassifierOutput,
config_class=_CONFIG_FOR_DOC,
)
def call(
self,
input_ids: TFModelInputType | None = None,
attention_mask: np.ndarray | tf.Tensor | None = None,
token_type_ids: np.ndarray | tf.Tensor | None = None,
position_ids: np.ndarray | tf.Tensor | None = None,
head_mask: np.ndarray | tf.Tensor | None = None,
inputs_embeds: np.ndarray | tf.Tensor | None = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
labels: np.ndarray | tf.Tensor | None = None,
training: Optional[bool] = False,
) -> Union[Tuple, TFSequenceClassifierOutput]:
r"""
labels (`tf.Tensor` of shape `(batch_size, sequence_length)`, *optional*):
Labels for computing the cross entropy classification loss. Indices should be in `[0, ...,
config.vocab_size - 1]`.
"""
transformer_outputs = self.transformer(
input_ids=input_ids,
attention_mask=attention_mask,
token_type_ids=token_type_ids,
position_ids=position_ids,
head_mask=head_mask,
inputs_embeds=inputs_embeds,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
training=training,
)
hidden_states = transformer_outputs[0]
logits = self.score(hidden_states)
in_logits = None
if self.config.pad_token_id is None:
sequence_lengths = -1
else:
if input_ids is not None:
sequence_lengths = (
tf.reduce_sum(
tf.cast(
tf.math.not_equal(input_ids, self.config.pad_token_id),
dtype=input_ids.dtype,
),
-1,
keepdims=False,
)
- 1
)
in_logits = tf.gather(logits, sequence_lengths, batch_dims=1, axis=1)
else:
sequence_lengths = -1
logger.warning(
f"{self.__class__.__name__} will not detect padding tokens in `inputs_embeds`. Results may be "
"unexpected if using padding tokens in conjunction with `inputs_embeds.`"
)
loss = None
if labels is not None:
if input_ids is not None:
batch_size, sequence_length = shape_list(input_ids)[:2]
else:
batch_size, sequence_length = shape_list(inputs_embeds)[:2]
assert (
self.config.pad_token_id is not None or batch_size == 1
), "Cannot handle batch sizes > 1 if no padding token is defined."
if not tf.is_tensor(sequence_lengths):
in_logits = logits[0:batch_size, sequence_lengths]
loss = self.hf_compute_loss(tf.reshape(labels, [-1, 1]), tf.reshape(in_logits, [-1, self.num_labels]))
pooled_logits = in_logits if in_logits is not None else logits
if not return_dict:
output = (pooled_logits,) + transformer_outputs[1:]
return ((loss,) + output) if loss is not None else output
return TFSequenceClassifierOutput(
loss=loss,
logits=pooled_logits,
hidden_states=transformer_outputs.hidden_states,
attentions=transformer_outputs.attentions,
)
| 37,783 | 43.088681 | 151 | py |
transformers | transformers-main/src/transformers/models/openai/modeling_openai.py | # coding=utf-8
# Copyright 2018 The OpenAI Team Authors and HuggingFace Inc. team.
# Copyright (c) 2018, NVIDIA CORPORATION. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
"""PyTorch OpenAI GPT model."""
import json
import math
import os
from dataclasses import dataclass
from typing import Any, Dict, Optional, Tuple, Union
import torch
from torch import nn
from torch.nn import BCEWithLogitsLoss, CrossEntropyLoss, MSELoss
from ...activations import gelu_new, silu
from ...modeling_outputs import BaseModelOutput, CausalLMOutput, SequenceClassifierOutput
from ...modeling_utils import PreTrainedModel, SequenceSummary
from ...pytorch_utils import Conv1D, find_pruneable_heads_and_indices, prune_conv1d_layer
from ...utils import (
ModelOutput,
add_code_sample_docstrings,
add_start_docstrings,
add_start_docstrings_to_model_forward,
logging,
replace_return_docstrings,
)
from .configuration_openai import OpenAIGPTConfig
logger = logging.get_logger(__name__)
_CHECKPOINT_FOR_DOC = "openai-gpt"
_CONFIG_FOR_DOC = "OpenAIGPTConfig"
OPENAI_GPT_PRETRAINED_MODEL_ARCHIVE_LIST = [
"openai-gpt",
# See all OpenAI GPT models at https://huggingface.co/models?filter=openai-gpt
]
def load_tf_weights_in_openai_gpt(model, config, openai_checkpoint_folder_path):
"""Load tf pre-trained weights in a pytorch model (from NumPy arrays here)"""
import re
import numpy as np
if ".ckpt" in openai_checkpoint_folder_path:
openai_checkpoint_folder_path = os.path.dirname(openai_checkpoint_folder_path)
logger.info(f"Loading weights from {openai_checkpoint_folder_path}")
with open(openai_checkpoint_folder_path + "/parameters_names.json", "r", encoding="utf-8") as names_handle:
names = json.load(names_handle)
with open(openai_checkpoint_folder_path + "/params_shapes.json", "r", encoding="utf-8") as shapes_handle:
shapes = json.load(shapes_handle)
offsets = np.cumsum([np.prod(shape) for shape in shapes])
init_params = [np.load(openai_checkpoint_folder_path + f"/params_{n}.npy") for n in range(10)]
init_params = np.split(np.concatenate(init_params, 0), offsets)[:-1]
init_params = [param.reshape(shape) for param, shape in zip(init_params, shapes)]
# This was used when we had a single embedding matrix for positions and tokens
# init_params[0] = np.concatenate([init_params[1], init_params[0]], 0)
# del init_params[1]
init_params = [arr.squeeze() for arr in init_params]
# Check that the token and position embeddings weight dimensions map those of the init parameters.
if model.tokens_embed.weight.shape != init_params[1].shape:
raise ValueError(
f"tokens_embed.weight.shape: {model.tokens_embed.weight.shape} does not match init_param[1].shape:"
f" {init_params[1].shape}"
)
if model.positions_embed.weight.shape != init_params[0].shape:
raise ValueError(
f"positions_embed.weight.shape: {model.positions_embed.weight.shape} does not match init_param[0].shape:"
f" {init_params[0].shape}"
)
model.tokens_embed.weight.data = torch.from_numpy(init_params[1])
model.positions_embed.weight.data = torch.from_numpy(init_params[0])
names.pop(0)
# Pop position and token embedding arrays
init_params.pop(0)
init_params.pop(0)
for name, array in zip(names, init_params): # names[1:n_transfer], init_params[1:n_transfer]):
name = name[6:] # skip "model/"
if name[-2:] != ":0":
raise ValueError(f"Layer {name} does not end with :0")
name = name[:-2]
name = name.split("/")
pointer = model
for m_name in name:
if re.fullmatch(r"[A-Za-z]+\d+", m_name):
scope_names = re.split(r"(\d+)", m_name)
else:
scope_names = [m_name]
if scope_names[0] == "g":
pointer = getattr(pointer, "weight")
elif scope_names[0] == "b":
pointer = getattr(pointer, "bias")
elif scope_names[0] == "w":
pointer = getattr(pointer, "weight")
else:
pointer = getattr(pointer, scope_names[0])
if len(scope_names) >= 2:
num = int(scope_names[1])
pointer = pointer[num]
# Ensure that the pointer and array have compatible shapes.
if pointer.shape != array.shape:
raise ValueError(f"Pointer shape {pointer.shape} and array shape {array.shape} mismatched")
logger.info(f"Initialize PyTorch weight {name}")
pointer.data = torch.from_numpy(array)
return model
ACT_FNS = {"relu": nn.ReLU, "silu": silu, "gelu": gelu_new, "swish": silu}
class Attention(nn.Module):
def __init__(self, nx, n_positions, config, scale=False):
super().__init__()
n_state = nx # in Attention: n_state=768 (nx=n_embd)
# [switch nx => n_state from Block to Attention to keep identical to TF implementation]
if n_state % config.n_head != 0:
raise ValueError(f"Attention n_state shape: {n_state} must be divisible by config.n_head {config.n_head}")
self.register_buffer(
"bias",
torch.tril(torch.ones(n_positions, n_positions)).view(1, 1, n_positions, n_positions),
persistent=False,
)
self.n_head = config.n_head
self.split_size = n_state
self.scale = scale
self.c_attn = Conv1D(n_state * 3, nx)
self.c_proj = Conv1D(n_state, nx)
self.attn_dropout = nn.Dropout(config.attn_pdrop)
self.resid_dropout = nn.Dropout(config.resid_pdrop)
self.pruned_heads = set()
def prune_heads(self, heads):
if len(heads) == 0:
return
heads, index = find_pruneable_heads_and_indices(
heads, self.n_head, self.split_size // self.n_head, self.pruned_heads
)
index_attn = torch.cat([index, index + self.split_size, index + (2 * self.split_size)])
# Prune conv1d layers
self.c_attn = prune_conv1d_layer(self.c_attn, index_attn, dim=1)
self.c_proj = prune_conv1d_layer(self.c_proj, index, dim=0)
# Update hyper params
self.split_size = (self.split_size // self.n_head) * (self.n_head - len(heads))
self.n_head = self.n_head - len(heads)
self.pruned_heads = self.pruned_heads.union(heads)
def _attn(self, q, k, v, attention_mask=None, head_mask=None, output_attentions=False):
w = torch.matmul(q, k)
if self.scale:
w = w / math.sqrt(v.size(-1))
# w = w * self.bias + -1e9 * (1 - self.bias) # TF implementation method: mask_attn_weights
# XD: self.b may be larger than w, so we need to crop it
b = self.bias[:, :, : w.size(-2), : w.size(-1)]
w = w * b + -1e4 * (1 - b)
if attention_mask is not None:
# Apply the attention mask
w = w + attention_mask
w = nn.functional.softmax(w, dim=-1)
w = self.attn_dropout(w)
# Mask heads if we want to
if head_mask is not None:
w = w * head_mask
outputs = [torch.matmul(w, v)]
if output_attentions:
outputs.append(w)
return outputs
def merge_heads(self, x):
x = x.permute(0, 2, 1, 3).contiguous()
new_x_shape = x.size()[:-2] + (x.size(-2) * x.size(-1),)
return x.view(*new_x_shape) # in Tensorflow implementation: fct merge_states
def split_heads(self, x, k=False):
new_x_shape = x.size()[:-1] + (self.n_head, x.size(-1) // self.n_head)
x = x.view(*new_x_shape) # in Tensorflow implementation: fct split_states
if k:
return x.permute(0, 2, 3, 1)
else:
return x.permute(0, 2, 1, 3)
def forward(self, x, attention_mask=None, head_mask=None, output_attentions=False):
x = self.c_attn(x)
query, key, value = x.split(self.split_size, dim=2)
query = self.split_heads(query)
key = self.split_heads(key, k=True)
value = self.split_heads(value)
attn_outputs = self._attn(query, key, value, attention_mask, head_mask, output_attentions)
a = attn_outputs[0]
a = self.merge_heads(a)
a = self.c_proj(a)
a = self.resid_dropout(a)
outputs = [a] + attn_outputs[1:]
return outputs # a, (attentions)
class MLP(nn.Module):
def __init__(self, n_state, config): # in MLP: n_state=3072 (4 * n_embd)
super().__init__()
nx = config.n_embd
self.c_fc = Conv1D(n_state, nx)
self.c_proj = Conv1D(nx, n_state)
self.act = ACT_FNS[config.afn]
self.dropout = nn.Dropout(config.resid_pdrop)
def forward(self, x):
h = self.act(self.c_fc(x))
h2 = self.c_proj(h)
return self.dropout(h2)
class Block(nn.Module):
def __init__(self, n_positions, config, scale=False):
super().__init__()
nx = config.n_embd
self.attn = Attention(nx, n_positions, config, scale)
self.ln_1 = nn.LayerNorm(nx, eps=config.layer_norm_epsilon)
self.mlp = MLP(4 * nx, config)
self.ln_2 = nn.LayerNorm(nx, eps=config.layer_norm_epsilon)
def forward(self, x, attention_mask=None, head_mask=None, output_attentions=False):
attn_outputs = self.attn(
x,
attention_mask=attention_mask,
head_mask=head_mask,
output_attentions=output_attentions,
)
a = attn_outputs[0]
n = self.ln_1(x + a)
m = self.mlp(n)
h = self.ln_2(n + m)
outputs = [h] + attn_outputs[1:]
return outputs
class OpenAIGPTPreTrainedModel(PreTrainedModel):
"""
An abstract class to handle weights initialization and a simple interface for downloading and loading pretrained
models.
"""
config_class = OpenAIGPTConfig
load_tf_weights = load_tf_weights_in_openai_gpt
base_model_prefix = "transformer"
def _init_weights(self, module):
"""Initialize the weights."""
if isinstance(module, (nn.Linear, Conv1D)):
# Slightly different from the TF version which uses truncated_normal for initialization
# cf https://github.com/pytorch/pytorch/pull/5617
module.weight.data.normal_(mean=0.0, std=self.config.initializer_range)
if module.bias is not None:
module.bias.data.zero_()
elif isinstance(module, nn.Embedding):
module.weight.data.normal_(mean=0.0, std=self.config.initializer_range)
if module.padding_idx is not None:
module.weight.data[module.padding_idx].zero_()
elif isinstance(module, nn.LayerNorm):
module.bias.data.zero_()
module.weight.data.fill_(1.0)
@dataclass
class OpenAIGPTDoubleHeadsModelOutput(ModelOutput):
"""
Base class for outputs of models predicting if two sentences are consecutive or not.
Args:
loss (`torch.FloatTensor` of shape `(1,)`, *optional*, returned when `labels` is provided):
Language modeling loss.
mc_loss (`torch.FloatTensor` of shape `(1,)`, *optional*, returned when `mc_labels` is provided):
Multiple choice classification loss.
logits (`torch.FloatTensor` of shape `(batch_size, num_choices, sequence_length, config.vocab_size)`):
Prediction scores of the language modeling head (scores for each vocabulary token before SoftMax).
mc_logits (`torch.FloatTensor` of shape `(batch_size, num_choices)`):
Prediction scores of the multiple choice classification head (scores for each choice before SoftMax).
hidden_states (`tuple(torch.FloatTensor)`, *optional*, returned when `output_hidden_states=True` is passed or when `config.output_hidden_states=True`):
Tuple of `torch.FloatTensor` (one for the output of the embeddings + one for the output of each layer) of
shape `(batch_size, sequence_length, hidden_size)`.
Hidden-states of the model at the output of each layer plus the initial embedding outputs.
attentions (`tuple(torch.FloatTensor)`, *optional*, returned when `output_attentions=True` is passed or when `config.output_attentions=True`):
Tuple of `torch.FloatTensor` (one for each layer) of shape `(batch_size, num_heads, sequence_length,
sequence_length)`.
Attentions weights after the attention softmax, used to compute the weighted average in the self-attention
heads.
"""
loss: Optional[torch.FloatTensor] = None
mc_loss: Optional[torch.FloatTensor] = None
logits: torch.FloatTensor = None
mc_logits: torch.FloatTensor = None
hidden_states: Optional[Tuple[torch.FloatTensor]] = None
attentions: Optional[Tuple[torch.FloatTensor]] = None
OPENAI_GPT_START_DOCSTRING = r"""
This model inherits from [`PreTrainedModel`]. Check the superclass documentation for the generic methods the
library implements for all its model (such as downloading or saving, resizing the input embeddings, pruning heads
etc.)
This model is also a PyTorch [torch.nn.Module](https://pytorch.org/docs/stable/nn.html#torch.nn.Module) subclass.
Use it as a regular PyTorch Module and refer to the PyTorch documentation for all matter related to general usage
and behavior.
Parameters:
config ([`OpenAIGPTConfig`]): Model configuration class with all the parameters of the model.
Initializing with a config file does not load the weights associated with the model, only the
configuration. Check out the [`~PreTrainedModel.from_pretrained`] method to load the model weights.
"""
OPENAI_GPT_INPUTS_DOCSTRING = r"""
Args:
input_ids (`torch.LongTensor` of shape `(batch_size, sequence_length)`):
Indices of input sequence tokens in the vocabulary.
Indices can be obtained using [`AutoTokenizer`]. See [`PreTrainedTokenizer.encode`] and
[`PreTrainedTokenizer.__call__`] for details.
[What are input IDs?](../glossary#input-ids)
attention_mask (`torch.FloatTensor` of shape `(batch_size, sequence_length)`, *optional*):
Mask to avoid performing attention on padding token indices. Mask values selected in `[0, 1]`:
- 1 for tokens that are **not masked**,
- 0 for tokens that are **masked**.
[What are attention masks?](../glossary#attention-mask)
token_type_ids (`torch.LongTensor` of shape `(batch_size, sequence_length)`, *optional*):
Segment token indices to indicate first and second portions of the inputs. Indices are selected in `[0,
1]`:
- 0 corresponds to a *sentence A* token,
- 1 corresponds to a *sentence B* token.
[What are token type IDs?](../glossary#token-type-ids)
position_ids (`torch.LongTensor` of shape `(batch_size, sequence_length)`, *optional*):
Indices of positions of each input sequence tokens in the position embeddings. Selected in the range `[0,
config.max_position_embeddings - 1]`.
[What are position IDs?](../glossary#position-ids)
head_mask (`torch.FloatTensor` of shape `(num_heads,)` or `(num_layers, num_heads)`, *optional*):
Mask to nullify selected heads of the self-attention modules. Mask values selected in `[0, 1]`:
- 1 indicates the head is **not masked**,
- 0 indicates the head is **masked**.
inputs_embeds (`torch.FloatTensor` of shape `(batch_size, sequence_length, hidden_size)`, *optional*):
Optionally, instead of passing `input_ids` you can choose to directly pass an embedded representation. This
is useful if you want more control over how to convert `input_ids` indices into associated vectors than the
model's internal embedding lookup matrix.
output_attentions (`bool`, *optional*):
Whether or not to return the attentions tensors of all attention layers. See `attentions` under returned
tensors for more detail.
output_hidden_states (`bool`, *optional*):
Whether or not to return the hidden states of all layers. See `hidden_states` under returned tensors for
more detail.
return_dict (`bool`, *optional*):
Whether or not to return a [`~utils.ModelOutput`] instead of a plain tuple.
"""
@add_start_docstrings(
"The bare OpenAI GPT transformer model outputting raw hidden-states without any specific head on top.",
OPENAI_GPT_START_DOCSTRING,
)
class OpenAIGPTModel(OpenAIGPTPreTrainedModel):
def __init__(self, config):
super().__init__(config)
self.tokens_embed = nn.Embedding(config.vocab_size, config.n_embd)
self.positions_embed = nn.Embedding(config.n_positions, config.n_embd)
self.drop = nn.Dropout(config.embd_pdrop)
self.h = nn.ModuleList([Block(config.n_positions, config, scale=True) for _ in range(config.n_layer)])
self.register_buffer("position_ids", torch.arange(config.n_positions), persistent=False)
# Initialize weights and apply final processing
self.post_init()
def get_input_embeddings(self):
return self.tokens_embed
def set_input_embeddings(self, new_embeddings):
self.tokens_embed = new_embeddings
def _prune_heads(self, heads_to_prune):
"""
Prunes heads of the model. heads_to_prune: dict of {layer_num: list of heads to prune in this layer}
"""
for layer, heads in heads_to_prune.items():
self.h[layer].attn.prune_heads(heads)
@add_start_docstrings_to_model_forward(OPENAI_GPT_INPUTS_DOCSTRING)
@add_code_sample_docstrings(
checkpoint=_CHECKPOINT_FOR_DOC,
output_type=BaseModelOutput,
config_class=_CONFIG_FOR_DOC,
)
def forward(
self,
input_ids: Optional[torch.LongTensor] = None,
attention_mask: Optional[torch.FloatTensor] = None,
token_type_ids: Optional[torch.LongTensor] = None,
position_ids: Optional[torch.LongTensor] = None,
head_mask: Optional[torch.FloatTensor] = None,
inputs_embeds: Optional[torch.FloatTensor] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[Tuple[torch.Tensor], BaseModelOutput]:
output_attentions = output_attentions if output_attentions is not None else self.config.output_attentions
output_hidden_states = (
output_hidden_states if output_hidden_states is not None else self.config.output_hidden_states
)
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
if input_ids is not None and inputs_embeds is not None:
raise ValueError("You cannot specify both input_ids and inputs_embeds at the same time")
elif input_ids is not None:
input_shape = input_ids.size()
input_ids = input_ids.view(-1, input_shape[-1])
elif inputs_embeds is not None:
input_shape = inputs_embeds.size()[:-1]
else:
raise ValueError("You have to specify either input_ids or inputs_embeds")
if position_ids is None:
# Code is different from when we had a single embedding matrix from position and token embeddings
position_ids = self.position_ids[None, : input_shape[-1]]
# Attention mask.
if attention_mask is not None:
# We create a 3D attention mask from a 2D tensor mask.
# Sizes are [batch_size, 1, 1, to_seq_length]
# So we can broadcast to [batch_size, num_heads, from_seq_length, to_seq_length]
# this attention mask is more simple than the triangular masking of causal attention
# used in OpenAI GPT, we just need to prepare the broadcast dimension here.
attention_mask = attention_mask.unsqueeze(1).unsqueeze(2)
# Since attention_mask is 1.0 for positions we want to attend and 0.0 for
# masked positions, this operation will create a tensor which is 0.0 for
# positions we want to attend and the dtype's smallest value for masked positions.
# Since we are adding it to the raw scores before the softmax, this is
# effectively the same as removing these entirely.
attention_mask = attention_mask.to(dtype=next(self.parameters()).dtype) # fp16 compatibility
attention_mask = (1.0 - attention_mask) * torch.finfo(self.dtype).min
# Prepare head mask if needed
head_mask = self.get_head_mask(head_mask, self.config.n_layer)
if inputs_embeds is None:
inputs_embeds = self.tokens_embed(input_ids)
position_embeds = self.positions_embed(position_ids)
if token_type_ids is not None:
token_type_ids = token_type_ids.view(-1, token_type_ids.size(-1))
token_type_embeds = self.tokens_embed(token_type_ids)
else:
token_type_embeds = 0
hidden_states = inputs_embeds + position_embeds + token_type_embeds
hidden_states = self.drop(hidden_states)
output_shape = input_shape + (hidden_states.size(-1),)
all_attentions = () if output_attentions else None
all_hidden_states = () if output_hidden_states else None
for i, block in enumerate(self.h):
if output_hidden_states:
all_hidden_states = all_hidden_states + (hidden_states,)
outputs = block(hidden_states, attention_mask, head_mask[i], output_attentions=output_attentions)
hidden_states = outputs[0]
if output_attentions:
all_attentions = all_attentions + (outputs[1],)
hidden_states = hidden_states.view(*output_shape)
# Add last layer
if output_hidden_states:
all_hidden_states = all_hidden_states + (hidden_states,)
if not return_dict:
return tuple(v for v in [hidden_states, all_hidden_states, all_attentions] if v is not None)
return BaseModelOutput(
last_hidden_state=hidden_states,
hidden_states=all_hidden_states,
attentions=all_attentions,
)
@add_start_docstrings(
"""
OpenAI GPT Model transformer with a language modeling head on top (linear layer with weights tied to the input
embeddings).
""",
OPENAI_GPT_START_DOCSTRING,
)
class OpenAIGPTLMHeadModel(OpenAIGPTPreTrainedModel):
_tied_weights_keys = ["lm_head.weight"]
def __init__(self, config):
super().__init__(config)
self.transformer = OpenAIGPTModel(config)
self.lm_head = nn.Linear(config.n_embd, config.vocab_size, bias=False)
# Initialize weights and apply final processing
self.post_init()
def get_output_embeddings(self):
return self.lm_head
def set_output_embeddings(self, new_embeddings):
self.lm_head = new_embeddings
@add_start_docstrings_to_model_forward(OPENAI_GPT_INPUTS_DOCSTRING)
@add_code_sample_docstrings(
checkpoint=_CHECKPOINT_FOR_DOC,
output_type=CausalLMOutput,
config_class=_CONFIG_FOR_DOC,
)
def forward(
self,
input_ids: Optional[torch.LongTensor] = None,
attention_mask: Optional[torch.FloatTensor] = None,
token_type_ids: Optional[torch.LongTensor] = None,
position_ids: Optional[torch.LongTensor] = None,
head_mask: Optional[torch.FloatTensor] = None,
inputs_embeds: Optional[torch.FloatTensor] = None,
labels: Optional[torch.LongTensor] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[Tuple[torch.Tensor], CausalLMOutput]:
r"""
labels (`torch.LongTensor` of shape `(batch_size, sequence_length)`, *optional*):
Labels for language modeling. Note that the labels **are shifted** inside the model, i.e. you can set
`labels = input_ids` Indices are selected in `[-100, 0, ..., config.vocab_size]` All labels set to `-100`
are ignored (masked), the loss is only computed for labels in `[0, ..., config.vocab_size]`
"""
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
transformer_outputs = self.transformer(
input_ids,
attention_mask=attention_mask,
token_type_ids=token_type_ids,
position_ids=position_ids,
head_mask=head_mask,
inputs_embeds=inputs_embeds,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
hidden_states = transformer_outputs[0]
lm_logits = self.lm_head(hidden_states)
loss = None
if labels is not None:
# Shift so that tokens < n predict n
shift_logits = lm_logits[..., :-1, :].contiguous()
shift_labels = labels[..., 1:].contiguous()
# Flatten the tokens
loss_fct = CrossEntropyLoss()
loss = loss_fct(shift_logits.view(-1, shift_logits.size(-1)), shift_labels.view(-1))
if not return_dict:
output = (lm_logits,) + transformer_outputs[1:]
return ((loss,) + output) if loss is not None else output
return CausalLMOutput(
loss=loss,
logits=lm_logits,
hidden_states=transformer_outputs.hidden_states,
attentions=transformer_outputs.attentions,
)
def prepare_inputs_for_generation(self, input_ids: torch.LongTensor, **kwargs) -> Dict[str, Any]:
return {"input_ids": input_ids}
@add_start_docstrings(
"""
OpenAI GPT Model transformer with a language modeling and a multiple-choice classification head on top e.g. for
RocStories/SWAG tasks. The two heads are two linear layers. The language modeling head has its weights tied to the
input embeddings, the classification head takes as input the input of a specified classification token index in the
input sequence).
""",
OPENAI_GPT_START_DOCSTRING,
)
class OpenAIGPTDoubleHeadsModel(OpenAIGPTPreTrainedModel):
_tied_weights_keys = ["lm_head.weight"]
def __init__(self, config):
super().__init__(config)
config.num_labels = 1
self.transformer = OpenAIGPTModel(config)
self.lm_head = nn.Linear(config.n_embd, config.vocab_size, bias=False)
self.multiple_choice_head = SequenceSummary(config)
# Initialize weights and apply final processing
self.post_init()
def get_output_embeddings(self):
return self.lm_head
def set_output_embeddings(self, new_embeddings):
self.lm_head = new_embeddings
@add_start_docstrings_to_model_forward(OPENAI_GPT_INPUTS_DOCSTRING)
@replace_return_docstrings(output_type=OpenAIGPTDoubleHeadsModelOutput, config_class=_CONFIG_FOR_DOC)
def forward(
self,
input_ids: Optional[torch.LongTensor] = None,
attention_mask: Optional[torch.FloatTensor] = None,
token_type_ids: Optional[torch.LongTensor] = None,
position_ids: Optional[torch.LongTensor] = None,
head_mask: Optional[torch.FloatTensor] = None,
inputs_embeds: Optional[torch.FloatTensor] = None,
mc_token_ids: Optional[torch.LongTensor] = None,
labels: Optional[torch.LongTensor] = None,
mc_labels: Optional[torch.LongTensor] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[Tuple[torch.Tensor], OpenAIGPTDoubleHeadsModelOutput]:
r"""
mc_token_ids (`torch.LongTensor` of shape `(batch_size, num_choices)`, *optional*, default to index of the last token of the input):
Index of the classification token in each input sequence. Selected in the range `[0, input_ids.size(-1) -
1]`.
labels (`torch.LongTensor` of shape `(batch_size, sequence_length)`, *optional*):
Labels for language modeling. Note that the labels **are shifted** inside the model, i.e. you can set
`labels = input_ids` Indices are selected in `[-1, 0, ..., config.vocab_size]` All labels set to `-100` are
ignored (masked), the loss is only computed for labels in `[0, ..., config.vocab_size]`
mc_labels (`torch.LongTensor` of shape `(batch_size)`, *optional*):
Labels for computing the multiple choice classification loss. Indices should be in `[0, ..., num_choices]`
where *num_choices* is the size of the second dimension of the input tensors. (see *input_ids* above)
Return:
Examples:
```python
>>> from transformers import AutoTokenizer, OpenAIGPTDoubleHeadsModel
>>> import torch
>>> tokenizer = AutoTokenizer.from_pretrained("openai-gpt")
>>> model = OpenAIGPTDoubleHeadsModel.from_pretrained("openai-gpt")
>>> tokenizer.add_special_tokens(
... {"cls_token": "[CLS]"}
... ) # Add a [CLS] to the vocabulary (we should train it also!)
>>> model.resize_token_embeddings(len(tokenizer))
>>> choices = ["Hello, my dog is cute [CLS]", "Hello, my cat is cute [CLS]"]
>>> input_ids = torch.tensor([tokenizer.encode(s) for s in choices]).unsqueeze(0) # Batch size 1, 2 choices
>>> mc_token_ids = torch.tensor([input_ids.size(-1) - 1, input_ids.size(-1) - 1]).unsqueeze(0) # Batch size 1
>>> outputs = model(input_ids, mc_token_ids=mc_token_ids)
>>> lm_logits = outputs.logits
>>> mc_logits = outputs.mc_logits
```"""
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
transformer_outputs = self.transformer(
input_ids,
attention_mask=attention_mask,
token_type_ids=token_type_ids,
position_ids=position_ids,
head_mask=head_mask,
inputs_embeds=inputs_embeds,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
hidden_states = transformer_outputs[0]
lm_logits = self.lm_head(hidden_states)
mc_logits = self.multiple_choice_head(hidden_states, mc_token_ids).squeeze(-1)
lm_loss, mc_loss = None, None
if mc_labels is not None:
loss_fct = CrossEntropyLoss()
mc_loss = loss_fct(mc_logits.view(-1, mc_logits.size(-1)), mc_labels.view(-1))
if labels is not None:
shift_logits = lm_logits[..., :-1, :].contiguous()
shift_labels = labels[..., 1:].contiguous()
loss_fct = CrossEntropyLoss()
lm_loss = loss_fct(shift_logits.view(-1, shift_logits.size(-1)), shift_labels.view(-1))
if not return_dict:
output = (lm_logits, mc_logits) + transformer_outputs[1:]
if mc_loss is not None:
output = (mc_loss,) + output
return ((lm_loss,) + output) if lm_loss is not None else output
return OpenAIGPTDoubleHeadsModelOutput(
loss=lm_loss,
mc_loss=mc_loss,
logits=lm_logits,
mc_logits=mc_logits,
hidden_states=transformer_outputs.hidden_states,
attentions=transformer_outputs.attentions,
)
@add_start_docstrings(
"""
The Original OpenAI GPT Model transformer with a sequence classification head on top (linear layer).
[`OpenAIGPTForSequenceClassification`] uses the last token in order to do the classification, as other causal
models (e.g. GPT-2) do. Since it does classification on the last token, it requires to know the position of the
last token. If a `pad_token_id` is defined in the configuration, it finds the last token that is not a padding
token in each row. If no `pad_token_id` is defined, it simply takes the last value in each row of the batch. Since
it cannot guess the padding tokens when `inputs_embeds` are passed instead of `input_ids`, it does the same (take
the last value in each row of the batch).
""",
OPENAI_GPT_START_DOCSTRING,
)
class OpenAIGPTForSequenceClassification(OpenAIGPTPreTrainedModel):
def __init__(self, config):
super().__init__(config)
self.num_labels = config.num_labels
self.transformer = OpenAIGPTModel(config)
self.score = nn.Linear(config.n_embd, self.num_labels, bias=False)
# Initialize weights and apply final processing
self.post_init()
@add_start_docstrings_to_model_forward(OPENAI_GPT_INPUTS_DOCSTRING)
@add_code_sample_docstrings(
checkpoint=_CHECKPOINT_FOR_DOC,
output_type=SequenceClassifierOutput,
config_class=_CONFIG_FOR_DOC,
)
def forward(
self,
input_ids: Optional[torch.LongTensor] = None,
attention_mask: Optional[torch.FloatTensor] = None,
token_type_ids: Optional[torch.LongTensor] = None,
position_ids: Optional[torch.LongTensor] = None,
head_mask: Optional[torch.FloatTensor] = None,
inputs_embeds: Optional[torch.FloatTensor] = None,
labels: Optional[torch.LongTensor] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[Tuple[torch.Tensor], SequenceClassifierOutput]:
r"""
labels (`torch.LongTensor` of shape `(batch_size,)`, *optional*):
Labels for computing the sequence classification/regression loss. Indices should be in `[0, ...,
config.num_labels - 1]`. If `config.num_labels == 1` a regression loss is computed (Mean-Square loss), If
`config.num_labels > 1` a classification loss is computed (Cross-Entropy).
"""
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
transformer_outputs = self.transformer(
input_ids,
attention_mask=attention_mask,
token_type_ids=token_type_ids,
position_ids=position_ids,
head_mask=head_mask,
inputs_embeds=inputs_embeds,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
hidden_states = transformer_outputs[0]
logits = self.score(hidden_states)
if input_ids is not None:
batch_size, sequence_length = input_ids.shape[:2]
else:
batch_size, sequence_length = inputs_embeds.shape[:2]
# Ensure the batch size is > 1 if there is no padding.
if self.config.pad_token_id is None and batch_size != 1:
raise ValueError("Cannot handle batch sizes > 1 if no padding token is defined.")
if self.config.pad_token_id is None:
sequence_lengths = -1
else:
if input_ids is not None:
sequence_lengths = torch.ne(input_ids, self.config.pad_token_id).sum(-1) - 1
else:
sequence_lengths = -1
logger.warning(
f"{self.__class__.__name__} will not detect padding tokens in `inputs_embeds`. Results may be "
"unexpected if using padding tokens in conjunction with `inputs_embeds.`"
)
pooled_logits = logits[range(batch_size), sequence_lengths]
loss = None
if labels is not None:
if self.config.problem_type is None:
if self.num_labels == 1:
self.config.problem_type = "regression"
elif self.num_labels > 1 and (labels.dtype == torch.long or labels.dtype == torch.int):
self.config.problem_type = "single_label_classification"
else:
self.config.problem_type = "multi_label_classification"
if self.config.problem_type == "regression":
loss_fct = MSELoss()
if self.num_labels == 1:
loss = loss_fct(pooled_logits.squeeze(), labels.squeeze())
else:
loss = loss_fct(pooled_logits, labels)
elif self.config.problem_type == "single_label_classification":
loss_fct = CrossEntropyLoss()
loss = loss_fct(pooled_logits.view(-1, self.num_labels), labels.view(-1))
elif self.config.problem_type == "multi_label_classification":
loss_fct = BCEWithLogitsLoss()
loss = loss_fct(pooled_logits, labels)
if not return_dict:
output = (pooled_logits,) + transformer_outputs[1:]
return ((loss,) + output) if loss is not None else output
return SequenceClassifierOutput(
loss=loss,
logits=pooled_logits,
hidden_states=transformer_outputs.hidden_states,
attentions=transformer_outputs.attentions,
)
| 38,004 | 43.294872 | 159 | py |
transformers | transformers-main/src/transformers/models/openai/convert_openai_original_tf_checkpoint_to_pytorch.py | # coding=utf-8
# Copyright 2018 The HuggingFace Inc. team.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
"""Convert OpenAI GPT checkpoint."""
import argparse
import torch
from transformers import OpenAIGPTConfig, OpenAIGPTModel, load_tf_weights_in_openai_gpt
from transformers.utils import CONFIG_NAME, WEIGHTS_NAME, logging
logging.set_verbosity_info()
def convert_openai_checkpoint_to_pytorch(openai_checkpoint_folder_path, openai_config_file, pytorch_dump_folder_path):
# Construct model
if openai_config_file == "":
config = OpenAIGPTConfig()
else:
config = OpenAIGPTConfig.from_json_file(openai_config_file)
model = OpenAIGPTModel(config)
# Load weights from numpy
load_tf_weights_in_openai_gpt(model, config, openai_checkpoint_folder_path)
# Save pytorch-model
pytorch_weights_dump_path = pytorch_dump_folder_path + "/" + WEIGHTS_NAME
pytorch_config_dump_path = pytorch_dump_folder_path + "/" + CONFIG_NAME
print(f"Save PyTorch model to {pytorch_weights_dump_path}")
torch.save(model.state_dict(), pytorch_weights_dump_path)
print(f"Save configuration file to {pytorch_config_dump_path}")
with open(pytorch_config_dump_path, "w", encoding="utf-8") as f:
f.write(config.to_json_string())
if __name__ == "__main__":
parser = argparse.ArgumentParser()
# Required parameters
parser.add_argument(
"--openai_checkpoint_folder_path",
default=None,
type=str,
required=True,
help="Path to the TensorFlow checkpoint path.",
)
parser.add_argument(
"--pytorch_dump_folder_path", default=None, type=str, required=True, help="Path to the output PyTorch model."
)
parser.add_argument(
"--openai_config_file",
default="",
type=str,
help=(
"An optional config json file corresponding to the pre-trained OpenAI model. \n"
"This specifies the model architecture."
),
)
args = parser.parse_args()
convert_openai_checkpoint_to_pytorch(
args.openai_checkpoint_folder_path, args.openai_config_file, args.pytorch_dump_folder_path
)
| 2,666 | 34.092105 | 118 | py |
transformers | transformers-main/src/transformers/models/openai/__init__.py | # Copyright 2020 The HuggingFace Team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
from typing import TYPE_CHECKING
from ...utils import (
OptionalDependencyNotAvailable,
_LazyModule,
is_tf_available,
is_tokenizers_available,
is_torch_available,
)
_import_structure = {
"configuration_openai": ["OPENAI_GPT_PRETRAINED_CONFIG_ARCHIVE_MAP", "OpenAIGPTConfig"],
"tokenization_openai": ["OpenAIGPTTokenizer"],
}
try:
if not is_tokenizers_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
_import_structure["tokenization_openai_fast"] = ["OpenAIGPTTokenizerFast"]
try:
if not is_torch_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
_import_structure["modeling_openai"] = [
"OPENAI_GPT_PRETRAINED_MODEL_ARCHIVE_LIST",
"OpenAIGPTDoubleHeadsModel",
"OpenAIGPTForSequenceClassification",
"OpenAIGPTLMHeadModel",
"OpenAIGPTModel",
"OpenAIGPTPreTrainedModel",
"load_tf_weights_in_openai_gpt",
]
try:
if not is_tf_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
_import_structure["modeling_tf_openai"] = [
"TF_OPENAI_GPT_PRETRAINED_MODEL_ARCHIVE_LIST",
"TFOpenAIGPTDoubleHeadsModel",
"TFOpenAIGPTForSequenceClassification",
"TFOpenAIGPTLMHeadModel",
"TFOpenAIGPTMainLayer",
"TFOpenAIGPTModel",
"TFOpenAIGPTPreTrainedModel",
]
if TYPE_CHECKING:
from .configuration_openai import OPENAI_GPT_PRETRAINED_CONFIG_ARCHIVE_MAP, OpenAIGPTConfig
from .tokenization_openai import OpenAIGPTTokenizer
try:
if not is_tokenizers_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
from .tokenization_openai_fast import OpenAIGPTTokenizerFast
try:
if not is_torch_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
from .modeling_openai import (
OPENAI_GPT_PRETRAINED_MODEL_ARCHIVE_LIST,
OpenAIGPTDoubleHeadsModel,
OpenAIGPTForSequenceClassification,
OpenAIGPTLMHeadModel,
OpenAIGPTModel,
OpenAIGPTPreTrainedModel,
load_tf_weights_in_openai_gpt,
)
try:
if not is_tf_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
from .modeling_tf_openai import (
TF_OPENAI_GPT_PRETRAINED_MODEL_ARCHIVE_LIST,
TFOpenAIGPTDoubleHeadsModel,
TFOpenAIGPTForSequenceClassification,
TFOpenAIGPTLMHeadModel,
TFOpenAIGPTMainLayer,
TFOpenAIGPTModel,
TFOpenAIGPTPreTrainedModel,
)
else:
import sys
sys.modules[__name__] = _LazyModule(__name__, globals()["__file__"], _import_structure, module_spec=__spec__)
| 3,658 | 29.491667 | 113 | py |
transformers | transformers-main/src/transformers/models/graphormer/collating_graphormer.py | # Copyright (c) Microsoft Corporation and HuggingFace
# Licensed under the MIT License.
from typing import Any, Dict, List, Mapping
import numpy as np
import torch
from ...utils import is_cython_available, requires_backends
if is_cython_available():
import pyximport
pyximport.install(setup_args={"include_dirs": np.get_include()})
from . import algos_graphormer # noqa E402
def convert_to_single_emb(x, offset: int = 512):
feature_num = x.shape[1] if len(x.shape) > 1 else 1
feature_offset = 1 + np.arange(0, feature_num * offset, offset, dtype=np.int64)
x = x + feature_offset
return x
def preprocess_item(item, keep_features=True):
requires_backends(preprocess_item, ["cython"])
if keep_features and "edge_attr" in item.keys(): # edge_attr
edge_attr = np.asarray(item["edge_attr"], dtype=np.int64)
else:
edge_attr = np.ones((len(item["edge_index"][0]), 1), dtype=np.int64) # same embedding for all
if keep_features and "node_feat" in item.keys(): # input_nodes
node_feature = np.asarray(item["node_feat"], dtype=np.int64)
else:
node_feature = np.ones((item["num_nodes"], 1), dtype=np.int64) # same embedding for all
edge_index = np.asarray(item["edge_index"], dtype=np.int64)
input_nodes = convert_to_single_emb(node_feature) + 1
num_nodes = item["num_nodes"]
if len(edge_attr.shape) == 1:
edge_attr = edge_attr[:, None]
attn_edge_type = np.zeros([num_nodes, num_nodes, edge_attr.shape[-1]], dtype=np.int64)
attn_edge_type[edge_index[0], edge_index[1]] = convert_to_single_emb(edge_attr) + 1
# node adj matrix [num_nodes, num_nodes] bool
adj = np.zeros([num_nodes, num_nodes], dtype=bool)
adj[edge_index[0], edge_index[1]] = True
shortest_path_result, path = algos_graphormer.floyd_warshall(adj)
max_dist = np.amax(shortest_path_result)
input_edges = algos_graphormer.gen_edge_input(max_dist, path, attn_edge_type)
attn_bias = np.zeros([num_nodes + 1, num_nodes + 1], dtype=np.single) # with graph token
# combine
item["input_nodes"] = input_nodes + 1 # we shift all indices by one for padding
item["attn_bias"] = attn_bias
item["attn_edge_type"] = attn_edge_type
item["spatial_pos"] = shortest_path_result.astype(np.int64) + 1 # we shift all indices by one for padding
item["in_degree"] = np.sum(adj, axis=1).reshape(-1) + 1 # we shift all indices by one for padding
item["out_degree"] = item["in_degree"] # for undirected graph
item["input_edges"] = input_edges + 1 # we shift all indices by one for padding
if "labels" not in item:
item["labels"] = item["y"]
return item
class GraphormerDataCollator:
def __init__(self, spatial_pos_max=20, on_the_fly_processing=False):
if not is_cython_available():
raise ImportError("Graphormer preprocessing needs Cython (pyximport)")
self.spatial_pos_max = spatial_pos_max
self.on_the_fly_processing = on_the_fly_processing
def __call__(self, features: List[dict]) -> Dict[str, Any]:
if self.on_the_fly_processing:
features = [preprocess_item(i) for i in features]
if not isinstance(features[0], Mapping):
features = [vars(f) for f in features]
batch = {}
max_node_num = max(len(i["input_nodes"]) for i in features)
node_feat_size = len(features[0]["input_nodes"][0])
edge_feat_size = len(features[0]["attn_edge_type"][0][0])
max_dist = max(len(i["input_edges"][0][0]) for i in features)
edge_input_size = len(features[0]["input_edges"][0][0][0])
batch_size = len(features)
batch["attn_bias"] = torch.zeros(batch_size, max_node_num + 1, max_node_num + 1, dtype=torch.float)
batch["attn_edge_type"] = torch.zeros(batch_size, max_node_num, max_node_num, edge_feat_size, dtype=torch.long)
batch["spatial_pos"] = torch.zeros(batch_size, max_node_num, max_node_num, dtype=torch.long)
batch["in_degree"] = torch.zeros(batch_size, max_node_num, dtype=torch.long)
batch["input_nodes"] = torch.zeros(batch_size, max_node_num, node_feat_size, dtype=torch.long)
batch["input_edges"] = torch.zeros(
batch_size, max_node_num, max_node_num, max_dist, edge_input_size, dtype=torch.long
)
for ix, f in enumerate(features):
for k in ["attn_bias", "attn_edge_type", "spatial_pos", "in_degree", "input_nodes", "input_edges"]:
f[k] = torch.tensor(f[k])
if len(f["attn_bias"][1:, 1:][f["spatial_pos"] >= self.spatial_pos_max]) > 0:
f["attn_bias"][1:, 1:][f["spatial_pos"] >= self.spatial_pos_max] = float("-inf")
batch["attn_bias"][ix, : f["attn_bias"].shape[0], : f["attn_bias"].shape[1]] = f["attn_bias"]
batch["attn_edge_type"][ix, : f["attn_edge_type"].shape[0], : f["attn_edge_type"].shape[1], :] = f[
"attn_edge_type"
]
batch["spatial_pos"][ix, : f["spatial_pos"].shape[0], : f["spatial_pos"].shape[1]] = f["spatial_pos"]
batch["in_degree"][ix, : f["in_degree"].shape[0]] = f["in_degree"]
batch["input_nodes"][ix, : f["input_nodes"].shape[0], :] = f["input_nodes"]
batch["input_edges"][
ix, : f["input_edges"].shape[0], : f["input_edges"].shape[1], : f["input_edges"].shape[2], :
] = f["input_edges"]
batch["out_degree"] = batch["in_degree"]
sample = features[0]["labels"]
if len(sample) == 1: # one task
if isinstance(sample[0], float): # regression
batch["labels"] = torch.from_numpy(np.concatenate([i["labels"] for i in features]))
else: # binary classification
batch["labels"] = torch.from_numpy(np.concatenate([i["labels"] for i in features]))
else: # multi task classification, left to float to keep the NaNs
batch["labels"] = torch.from_numpy(np.stack([i["labels"] for i in features], axis=0))
return batch
| 6,086 | 44.088889 | 119 | py |
transformers | transformers-main/src/transformers/models/graphormer/modeling_graphormer.py | # coding=utf-8
# Copyright 2022 Microsoft, clefourrier The HuggingFace Inc. team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
""" PyTorch Graphormer model."""
import math
from typing import Iterable, Iterator, List, Optional, Tuple, Union
import torch
import torch.nn as nn
from torch.nn import BCEWithLogitsLoss, CrossEntropyLoss, MSELoss
from ...activations import ACT2FN
from ...modeling_outputs import (
BaseModelOutputWithNoAttention,
SequenceClassifierOutput,
)
from ...modeling_utils import PreTrainedModel
from ...utils import logging
from .configuration_graphormer import GraphormerConfig
logger = logging.get_logger(__name__)
_CHECKPOINT_FOR_DOC = "graphormer-base-pcqm4mv1"
_CONFIG_FOR_DOC = "GraphormerConfig"
GRAPHORMER_PRETRAINED_MODEL_ARCHIVE_LIST = [
"clefourrier/graphormer-base-pcqm4mv1",
"clefourrier/graphormer-base-pcqm4mv2",
# See all Graphormer models at https://huggingface.co/models?filter=graphormer
]
def quant_noise(module: nn.Module, p: float, block_size: int):
"""
From:
https://github.com/facebookresearch/fairseq/blob/dd0079bde7f678b0cd0715cbd0ae68d661b7226d/fairseq/modules/quant_noise.py
Wraps modules and applies quantization noise to the weights for subsequent quantization with Iterative Product
Quantization as described in "Training with Quantization Noise for Extreme Model Compression"
Args:
- module: nn.Module
- p: amount of Quantization Noise
- block_size: size of the blocks for subsequent quantization with iPQ
Remarks:
- Module weights must have the right sizes wrt the block size
- Only Linear, Embedding and Conv2d modules are supported for the moment
- For more detail on how to quantize by blocks with convolutional weights, see "And the Bit Goes Down:
Revisiting the Quantization of Neural Networks"
- We implement the simplest form of noise here as stated in the paper which consists in randomly dropping
blocks
"""
# if no quantization noise, don't register hook
if p <= 0:
return module
# supported modules
if not isinstance(module, (nn.Linear, nn.Embedding, nn.Conv2d)):
raise NotImplementedError("Module unsupported for quant_noise.")
# test whether module.weight has the right sizes wrt block_size
is_conv = module.weight.ndim == 4
# 2D matrix
if not is_conv:
if module.weight.size(1) % block_size != 0:
raise AssertionError("Input features must be a multiple of block sizes")
# 4D matrix
else:
# 1x1 convolutions
if module.kernel_size == (1, 1):
if module.in_channels % block_size != 0:
raise AssertionError("Input channels must be a multiple of block sizes")
# regular convolutions
else:
k = module.kernel_size[0] * module.kernel_size[1]
if k % block_size != 0:
raise AssertionError("Kernel size must be a multiple of block size")
def _forward_pre_hook(mod, input):
# no noise for evaluation
if mod.training:
if not is_conv:
# gather weight and sizes
weight = mod.weight
in_features = weight.size(1)
out_features = weight.size(0)
# split weight matrix into blocks and randomly drop selected blocks
mask = torch.zeros(in_features // block_size * out_features, device=weight.device)
mask.bernoulli_(p)
mask = mask.repeat_interleave(block_size, -1).view(-1, in_features)
else:
# gather weight and sizes
weight = mod.weight
in_channels = mod.in_channels
out_channels = mod.out_channels
# split weight matrix into blocks and randomly drop selected blocks
if mod.kernel_size == (1, 1):
mask = torch.zeros(
int(in_channels // block_size * out_channels),
device=weight.device,
)
mask.bernoulli_(p)
mask = mask.repeat_interleave(block_size, -1).view(-1, in_channels)
else:
mask = torch.zeros(weight.size(0), weight.size(1), device=weight.device)
mask.bernoulli_(p)
mask = mask.unsqueeze(2).unsqueeze(3).repeat(1, 1, mod.kernel_size[0], mod.kernel_size[1])
# scale weights and apply mask
mask = mask.to(torch.bool) # x.bool() is not currently supported in TorchScript
s = 1 / (1 - p)
mod.weight.data = s * weight.masked_fill(mask, 0)
module.register_forward_pre_hook(_forward_pre_hook)
return module
class LayerDropModuleList(nn.ModuleList):
"""
From:
https://github.com/facebookresearch/fairseq/blob/dd0079bde7f678b0cd0715cbd0ae68d661b7226d/fairseq/modules/layer_drop.py
A LayerDrop implementation based on [`torch.nn.ModuleList`]. LayerDrop as described in
https://arxiv.org/abs/1909.11556.
We refresh the choice of which layers to drop every time we iterate over the LayerDropModuleList instance. During
evaluation we always iterate over all layers.
Usage:
```python
layers = LayerDropList(p=0.5, modules=[layer1, layer2, layer3])
for layer in layers: # this might iterate over layers 1 and 3
x = layer(x)
for layer in layers: # this might iterate over all layers
x = layer(x)
for layer in layers: # this might not iterate over any layers
x = layer(x)
```
Args:
p (float): probability of dropping out each layer
modules (iterable, optional): an iterable of modules to add
"""
def __init__(self, p: float, modules: Optional[Iterable[nn.Module]] = None):
super().__init__(modules)
self.p = p
def __iter__(self) -> Iterator[nn.Module]:
dropout_probs = torch.empty(len(self)).uniform_()
for i, m in enumerate(super().__iter__()):
if not self.training or (dropout_probs[i] > self.p):
yield m
class GraphormerGraphNodeFeature(nn.Module):
"""
Compute node features for each node in the graph.
"""
def __init__(self, config: GraphormerConfig):
super().__init__()
self.num_heads = config.num_attention_heads
self.num_atoms = config.num_atoms
self.atom_encoder = nn.Embedding(config.num_atoms + 1, config.hidden_size, padding_idx=config.pad_token_id)
self.in_degree_encoder = nn.Embedding(
config.num_in_degree, config.hidden_size, padding_idx=config.pad_token_id
)
self.out_degree_encoder = nn.Embedding(
config.num_out_degree, config.hidden_size, padding_idx=config.pad_token_id
)
self.graph_token = nn.Embedding(1, config.hidden_size)
def forward(
self,
input_nodes: torch.LongTensor,
in_degree: torch.LongTensor,
out_degree: torch.LongTensor,
) -> torch.Tensor:
n_graph, n_node = input_nodes.size()[:2]
node_feature = ( # node feature + graph token
self.atom_encoder(input_nodes).sum(dim=-2) # [n_graph, n_node, n_hidden]
+ self.in_degree_encoder(in_degree)
+ self.out_degree_encoder(out_degree)
)
graph_token_feature = self.graph_token.weight.unsqueeze(0).repeat(n_graph, 1, 1)
graph_node_feature = torch.cat([graph_token_feature, node_feature], dim=1)
return graph_node_feature
class GraphormerGraphAttnBias(nn.Module):
"""
Compute attention bias for each head.
"""
def __init__(self, config: GraphormerConfig):
super().__init__()
self.num_heads = config.num_attention_heads
self.multi_hop_max_dist = config.multi_hop_max_dist
# We do not change edge feature embedding learning, as edge embeddings are represented as a combination of the original features
# + shortest path
self.edge_encoder = nn.Embedding(config.num_edges + 1, config.num_attention_heads, padding_idx=0)
self.edge_type = config.edge_type
if self.edge_type == "multi_hop":
self.edge_dis_encoder = nn.Embedding(
config.num_edge_dis * config.num_attention_heads * config.num_attention_heads,
1,
)
self.spatial_pos_encoder = nn.Embedding(config.num_spatial, config.num_attention_heads, padding_idx=0)
self.graph_token_virtual_distance = nn.Embedding(1, config.num_attention_heads)
def forward(
self,
input_nodes: torch.LongTensor,
attn_bias: torch.Tensor,
spatial_pos: torch.LongTensor,
input_edges: torch.LongTensor,
attn_edge_type: torch.LongTensor,
) -> torch.Tensor:
n_graph, n_node = input_nodes.size()[:2]
graph_attn_bias = attn_bias.clone()
graph_attn_bias = graph_attn_bias.unsqueeze(1).repeat(
1, self.num_heads, 1, 1
) # [n_graph, n_head, n_node+1, n_node+1]
# spatial pos
# [n_graph, n_node, n_node, n_head] -> [n_graph, n_head, n_node, n_node]
spatial_pos_bias = self.spatial_pos_encoder(spatial_pos).permute(0, 3, 1, 2)
graph_attn_bias[:, :, 1:, 1:] = graph_attn_bias[:, :, 1:, 1:] + spatial_pos_bias
# reset spatial pos here
t = self.graph_token_virtual_distance.weight.view(1, self.num_heads, 1)
graph_attn_bias[:, :, 1:, 0] = graph_attn_bias[:, :, 1:, 0] + t
graph_attn_bias[:, :, 0, :] = graph_attn_bias[:, :, 0, :] + t
# edge feature
if self.edge_type == "multi_hop":
spatial_pos_ = spatial_pos.clone()
spatial_pos_[spatial_pos_ == 0] = 1 # set pad to 1
# set 1 to 1, input_nodes > 1 to input_nodes - 1
spatial_pos_ = torch.where(spatial_pos_ > 1, spatial_pos_ - 1, spatial_pos_)
if self.multi_hop_max_dist > 0:
spatial_pos_ = spatial_pos_.clamp(0, self.multi_hop_max_dist)
input_edges = input_edges[:, :, :, : self.multi_hop_max_dist, :]
# [n_graph, n_node, n_node, max_dist, n_head]
input_edges = self.edge_encoder(input_edges).mean(-2)
max_dist = input_edges.size(-2)
edge_input_flat = input_edges.permute(3, 0, 1, 2, 4).reshape(max_dist, -1, self.num_heads)
edge_input_flat = torch.bmm(
edge_input_flat,
self.edge_dis_encoder.weight.reshape(-1, self.num_heads, self.num_heads)[:max_dist, :, :],
)
input_edges = edge_input_flat.reshape(max_dist, n_graph, n_node, n_node, self.num_heads).permute(
1, 2, 3, 0, 4
)
input_edges = (input_edges.sum(-2) / (spatial_pos_.float().unsqueeze(-1))).permute(0, 3, 1, 2)
else:
# [n_graph, n_node, n_node, n_head] -> [n_graph, n_head, n_node, n_node]
input_edges = self.edge_encoder(attn_edge_type).mean(-2).permute(0, 3, 1, 2)
graph_attn_bias[:, :, 1:, 1:] = graph_attn_bias[:, :, 1:, 1:] + input_edges
graph_attn_bias = graph_attn_bias + attn_bias.unsqueeze(1) # reset
return graph_attn_bias
class GraphormerMultiheadAttention(nn.Module):
"""Multi-headed attention.
See "Attention Is All You Need" for more details.
"""
def __init__(self, config: GraphormerConfig):
super().__init__()
self.embedding_dim = config.embedding_dim
self.kdim = config.kdim if config.kdim is not None else config.embedding_dim
self.vdim = config.vdim if config.vdim is not None else config.embedding_dim
self.qkv_same_dim = self.kdim == config.embedding_dim and self.vdim == config.embedding_dim
self.num_heads = config.num_attention_heads
self.dropout_module = torch.nn.Dropout(p=config.dropout, inplace=False)
self.head_dim = config.embedding_dim // config.num_attention_heads
if not (self.head_dim * config.num_attention_heads == self.embedding_dim):
raise AssertionError("The embedding_dim must be divisible by num_heads.")
self.scaling = self.head_dim**-0.5
self.self_attention = True # config.self_attention
if not (self.self_attention):
raise NotImplementedError("The Graphormer model only supports self attention for now.")
if self.self_attention and not self.qkv_same_dim:
raise AssertionError("Self-attention requires query, key and value to be of the same size.")
self.k_proj = quant_noise(
nn.Linear(self.kdim, config.embedding_dim, bias=config.bias),
config.q_noise,
config.qn_block_size,
)
self.v_proj = quant_noise(
nn.Linear(self.vdim, config.embedding_dim, bias=config.bias),
config.q_noise,
config.qn_block_size,
)
self.q_proj = quant_noise(
nn.Linear(config.embedding_dim, config.embedding_dim, bias=config.bias),
config.q_noise,
config.qn_block_size,
)
self.out_proj = quant_noise(
nn.Linear(config.embedding_dim, config.embedding_dim, bias=config.bias),
config.q_noise,
config.qn_block_size,
)
self.onnx_trace = False
def reset_parameters(self):
if self.qkv_same_dim:
# Empirically observed the convergence to be much better with
# the scaled initialization
nn.init.xavier_uniform_(self.k_proj.weight, gain=1 / math.sqrt(2))
nn.init.xavier_uniform_(self.v_proj.weight, gain=1 / math.sqrt(2))
nn.init.xavier_uniform_(self.q_proj.weight, gain=1 / math.sqrt(2))
else:
nn.init.xavier_uniform_(self.k_proj.weight)
nn.init.xavier_uniform_(self.v_proj.weight)
nn.init.xavier_uniform_(self.q_proj.weight)
nn.init.xavier_uniform_(self.out_proj.weight)
if self.out_proj.bias is not None:
nn.init.constant_(self.out_proj.bias, 0.0)
def forward(
self,
query: torch.LongTensor,
key: Optional[torch.Tensor],
value: Optional[torch.Tensor],
attn_bias: Optional[torch.Tensor],
key_padding_mask: Optional[torch.Tensor] = None,
need_weights: bool = True,
attn_mask: Optional[torch.Tensor] = None,
before_softmax: bool = False,
need_head_weights: bool = False,
) -> Tuple[torch.Tensor, Optional[torch.Tensor]]:
"""
Args:
key_padding_mask (Bytetorch.Tensor, optional): mask to exclude
keys that are pads, of shape `(batch, src_len)`, where padding elements are indicated by 1s.
need_weights (bool, optional): return the attention weights,
averaged over heads (default: False).
attn_mask (Bytetorch.Tensor, optional): typically used to
implement causal attention, where the mask prevents the attention from looking forward in time
(default: None).
before_softmax (bool, optional): return the raw attention
weights and values before the attention softmax.
need_head_weights (bool, optional): return the attention
weights for each head. Implies *need_weights*. Default: return the average attention weights over all
heads.
"""
if need_head_weights:
need_weights = True
tgt_len, bsz, embedding_dim = query.size()
src_len = tgt_len
if not (embedding_dim == self.embedding_dim):
raise AssertionError(
f"The query embedding dimension {embedding_dim} is not equal to the expected embedding_dim"
f" {self.embedding_dim}."
)
if not (list(query.size()) == [tgt_len, bsz, embedding_dim]):
raise AssertionError("Query size incorrect in Graphormer, compared to model dimensions.")
if key is not None:
src_len, key_bsz, _ = key.size()
if not torch.jit.is_scripting():
if (key_bsz != bsz) or (value is None) or not (src_len, bsz == value.shape[:2]):
raise AssertionError(
"The batch shape does not match the key or value shapes provided to the attention."
)
q = self.q_proj(query)
k = self.k_proj(query)
v = self.v_proj(query)
q *= self.scaling
q = q.contiguous().view(tgt_len, bsz * self.num_heads, self.head_dim).transpose(0, 1)
if k is not None:
k = k.contiguous().view(-1, bsz * self.num_heads, self.head_dim).transpose(0, 1)
if v is not None:
v = v.contiguous().view(-1, bsz * self.num_heads, self.head_dim).transpose(0, 1)
if (k is None) or not (k.size(1) == src_len):
raise AssertionError("The shape of the key generated in the attention is incorrect")
# This is part of a workaround to get around fork/join parallelism
# not supporting Optional types.
if key_padding_mask is not None and key_padding_mask.dim() == 0:
key_padding_mask = None
if key_padding_mask is not None:
if key_padding_mask.size(0) != bsz or key_padding_mask.size(1) != src_len:
raise AssertionError(
"The shape of the generated padding mask for the key does not match expected dimensions."
)
attn_weights = torch.bmm(q, k.transpose(1, 2))
attn_weights = self.apply_sparse_mask(attn_weights, tgt_len, src_len, bsz)
if list(attn_weights.size()) != [bsz * self.num_heads, tgt_len, src_len]:
raise AssertionError("The attention weights generated do not match the expected dimensions.")
if attn_bias is not None:
attn_weights += attn_bias.view(bsz * self.num_heads, tgt_len, src_len)
if attn_mask is not None:
attn_mask = attn_mask.unsqueeze(0)
attn_weights += attn_mask
if key_padding_mask is not None:
# don't attend to padding symbols
attn_weights = attn_weights.view(bsz, self.num_heads, tgt_len, src_len)
attn_weights = attn_weights.masked_fill(
key_padding_mask.unsqueeze(1).unsqueeze(2).to(torch.bool), float("-inf")
)
attn_weights = attn_weights.view(bsz * self.num_heads, tgt_len, src_len)
if before_softmax:
return attn_weights, v
attn_weights_float = torch.nn.functional.softmax(attn_weights, dim=-1)
attn_weights = attn_weights_float.type_as(attn_weights)
attn_probs = self.dropout_module(attn_weights)
if v is None:
raise AssertionError("No value generated")
attn = torch.bmm(attn_probs, v)
if list(attn.size()) != [bsz * self.num_heads, tgt_len, self.head_dim]:
raise AssertionError("The attention generated do not match the expected dimensions.")
attn = attn.transpose(0, 1).contiguous().view(tgt_len, bsz, embedding_dim)
attn: torch.Tensor = self.out_proj(attn)
attn_weights = None
if need_weights:
attn_weights = attn_weights_float.contiguous().view(bsz, self.num_heads, tgt_len, src_len).transpose(1, 0)
if not need_head_weights:
# average attention weights over heads
attn_weights = attn_weights.mean(dim=0)
return attn, attn_weights
def apply_sparse_mask(self, attn_weights: torch.Tensor, tgt_len: int, src_len: int, bsz: int) -> torch.Tensor:
return attn_weights
class GraphormerGraphEncoderLayer(nn.Module):
def __init__(self, config: GraphormerConfig) -> None:
super().__init__()
# Initialize parameters
self.embedding_dim = config.embedding_dim
self.num_attention_heads = config.num_attention_heads
self.attention_dropout = config.attention_dropout
self.q_noise = config.q_noise
self.qn_block_size = config.qn_block_size
self.pre_layernorm = config.pre_layernorm
self.dropout_module = torch.nn.Dropout(p=config.dropout, inplace=False)
self.activation_dropout_module = torch.nn.Dropout(p=config.dropout, inplace=False)
# Initialize blocks
self.activation_fn = ACT2FN[config.activation_fn]
self.self_attn = GraphormerMultiheadAttention(config)
# layer norm associated with the self attention layer
self.self_attn_layer_norm = nn.LayerNorm(self.embedding_dim)
self.fc1 = self.build_fc(
self.embedding_dim,
config.ffn_embedding_dim,
q_noise=config.q_noise,
qn_block_size=config.qn_block_size,
)
self.fc2 = self.build_fc(
config.ffn_embedding_dim,
self.embedding_dim,
q_noise=config.q_noise,
qn_block_size=config.qn_block_size,
)
# layer norm associated with the position wise feed-forward NN
self.final_layer_norm = nn.LayerNorm(self.embedding_dim)
def build_fc(
self, input_dim: int, output_dim: int, q_noise: float, qn_block_size: int
) -> Union[nn.Module, nn.Linear, nn.Embedding, nn.Conv2d]:
return quant_noise(nn.Linear(input_dim, output_dim), q_noise, qn_block_size)
def forward(
self,
input_nodes: torch.Tensor,
self_attn_bias: Optional[torch.Tensor] = None,
self_attn_mask: Optional[torch.Tensor] = None,
self_attn_padding_mask: Optional[torch.Tensor] = None,
) -> Tuple[torch.Tensor, Optional[torch.Tensor]]:
"""
nn.LayerNorm is applied either before or after the self-attention/ffn modules similar to the original
Transformer implementation.
"""
residual = input_nodes
if self.pre_layernorm:
input_nodes = self.self_attn_layer_norm(input_nodes)
input_nodes, attn = self.self_attn(
query=input_nodes,
key=input_nodes,
value=input_nodes,
attn_bias=self_attn_bias,
key_padding_mask=self_attn_padding_mask,
need_weights=False,
attn_mask=self_attn_mask,
)
input_nodes = self.dropout_module(input_nodes)
input_nodes = residual + input_nodes
if not self.pre_layernorm:
input_nodes = self.self_attn_layer_norm(input_nodes)
residual = input_nodes
if self.pre_layernorm:
input_nodes = self.final_layer_norm(input_nodes)
input_nodes = self.activation_fn(self.fc1(input_nodes))
input_nodes = self.activation_dropout_module(input_nodes)
input_nodes = self.fc2(input_nodes)
input_nodes = self.dropout_module(input_nodes)
input_nodes = residual + input_nodes
if not self.pre_layernorm:
input_nodes = self.final_layer_norm(input_nodes)
return input_nodes, attn
class GraphormerGraphEncoder(nn.Module):
def __init__(self, config: GraphormerConfig):
super().__init__()
self.dropout_module = torch.nn.Dropout(p=config.dropout, inplace=False)
self.layerdrop = config.layerdrop
self.embedding_dim = config.embedding_dim
self.apply_graphormer_init = config.apply_graphormer_init
self.traceable = config.traceable
self.graph_node_feature = GraphormerGraphNodeFeature(config)
self.graph_attn_bias = GraphormerGraphAttnBias(config)
self.embed_scale = config.embed_scale
if config.q_noise > 0:
self.quant_noise = quant_noise(
nn.Linear(self.embedding_dim, self.embedding_dim, bias=False),
config.q_noise,
config.qn_block_size,
)
else:
self.quant_noise = None
if config.encoder_normalize_before:
self.emb_layer_norm = nn.LayerNorm(self.embedding_dim)
else:
self.emb_layer_norm = None
if config.pre_layernorm:
self.final_layer_norm = nn.LayerNorm(self.embedding_dim)
if self.layerdrop > 0.0:
self.layers = LayerDropModuleList(p=self.layerdrop)
else:
self.layers = nn.ModuleList([])
self.layers.extend([GraphormerGraphEncoderLayer(config) for _ in range(config.num_hidden_layers)])
# Apply initialization of model params after building the model
if config.freeze_embeddings:
raise NotImplementedError("Freezing embeddings is not implemented yet.")
for layer in range(config.num_trans_layers_to_freeze):
m = self.layers[layer]
if m is not None:
for p in m.parameters():
p.requires_grad = False
def forward(
self,
input_nodes: torch.LongTensor,
input_edges: torch.LongTensor,
attn_bias: torch.Tensor,
in_degree: torch.LongTensor,
out_degree: torch.LongTensor,
spatial_pos: torch.LongTensor,
attn_edge_type: torch.LongTensor,
perturb=None,
last_state_only: bool = False,
token_embeddings: Optional[torch.Tensor] = None,
attn_mask: Optional[torch.Tensor] = None,
) -> Tuple[Union[torch.Tensor, List[torch.LongTensor]], torch.Tensor]:
# compute padding mask. This is needed for multi-head attention
data_x = input_nodes
n_graph, n_node = data_x.size()[:2]
padding_mask = (data_x[:, :, 0]).eq(0)
padding_mask_cls = torch.zeros(n_graph, 1, device=padding_mask.device, dtype=padding_mask.dtype)
padding_mask = torch.cat((padding_mask_cls, padding_mask), dim=1)
attn_bias = self.graph_attn_bias(input_nodes, attn_bias, spatial_pos, input_edges, attn_edge_type)
if token_embeddings is not None:
input_nodes = token_embeddings
else:
input_nodes = self.graph_node_feature(input_nodes, in_degree, out_degree)
if perturb is not None:
input_nodes[:, 1:, :] += perturb
if self.embed_scale is not None:
input_nodes = input_nodes * self.embed_scale
if self.quant_noise is not None:
input_nodes = self.quant_noise(input_nodes)
if self.emb_layer_norm is not None:
input_nodes = self.emb_layer_norm(input_nodes)
input_nodes = self.dropout_module(input_nodes)
input_nodes = input_nodes.transpose(0, 1)
inner_states = []
if not last_state_only:
inner_states.append(input_nodes)
for layer in self.layers:
input_nodes, _ = layer(
input_nodes,
self_attn_padding_mask=padding_mask,
self_attn_mask=attn_mask,
self_attn_bias=attn_bias,
)
if not last_state_only:
inner_states.append(input_nodes)
graph_rep = input_nodes[0, :, :]
if last_state_only:
inner_states = [input_nodes]
if self.traceable:
return torch.stack(inner_states), graph_rep
else:
return inner_states, graph_rep
class GraphormerDecoderHead(nn.Module):
def __init__(self, embedding_dim: int, num_classes: int):
super().__init__()
"""num_classes should be 1 for regression, or the number of classes for classification"""
self.lm_output_learned_bias = nn.Parameter(torch.zeros(1))
self.classifier = nn.Linear(embedding_dim, num_classes, bias=False)
self.num_classes = num_classes
def forward(self, input_nodes: torch.Tensor, **unused) -> torch.Tensor:
input_nodes = self.classifier(input_nodes)
input_nodes = input_nodes + self.lm_output_learned_bias
return input_nodes
class GraphormerPreTrainedModel(PreTrainedModel):
"""
An abstract class to handle weights initialization and a simple interface for downloading and loading pretrained
models.
"""
config_class = GraphormerConfig
base_model_prefix = "graphormer"
supports_gradient_checkpointing = True
main_input_name_nodes = "input_nodes"
main_input_name_edges = "input_edges"
def normal_(self, data: torch.Tensor):
# with FSDP, module params will be on CUDA, so we cast them back to CPU
# so that the RNG is consistent with and without FSDP
data.copy_(data.cpu().normal_(mean=0.0, std=0.02).to(data.device))
def init_graphormer_params(self, module: Union[nn.Linear, nn.Embedding, GraphormerMultiheadAttention]):
"""
Initialize the weights specific to the Graphormer Model.
"""
if isinstance(module, nn.Linear):
self.normal_(module.weight.data)
if module.bias is not None:
module.bias.data.zero_()
if isinstance(module, nn.Embedding):
self.normal_(module.weight.data)
if module.padding_idx is not None:
module.weight.data[module.padding_idx].zero_()
if isinstance(module, GraphormerMultiheadAttention):
self.normal_(module.q_proj.weight.data)
self.normal_(module.k_proj.weight.data)
self.normal_(module.v_proj.weight.data)
def _init_weights(
self,
module: Union[
nn.Linear, nn.Conv2d, nn.Embedding, nn.LayerNorm, GraphormerMultiheadAttention, GraphormerGraphEncoder
],
):
"""
Initialize the weights
"""
if isinstance(module, (nn.Linear, nn.Conv2d)):
# We might be missing part of the Linear init, dependant on the layer num
module.weight.data.normal_(mean=0.0, std=0.02)
if module.bias is not None:
module.bias.data.zero_()
elif isinstance(module, nn.Embedding):
module.weight.data.normal_(mean=0.0, std=0.02)
if module.padding_idx is not None:
module.weight.data[module.padding_idx].zero_()
elif isinstance(module, GraphormerMultiheadAttention):
module.q_proj.weight.data.normal_(mean=0.0, std=0.02)
module.k_proj.weight.data.normal_(mean=0.0, std=0.02)
module.v_proj.weight.data.normal_(mean=0.0, std=0.02)
module.reset_parameters()
elif isinstance(module, nn.LayerNorm):
module.bias.data.zero_()
module.weight.data.fill_(1.0)
elif isinstance(module, GraphormerGraphEncoder):
if module.apply_graphormer_init:
module.apply(self.init_graphormer_params)
elif isinstance(module, nn.LayerNorm):
module.bias.data.zero_()
module.weight.data.fill_(1.0)
def _set_gradient_checkpointing(self, module, value=False):
if isinstance(module, GraphormerModel):
module.gradient_checkpointing = value
class GraphormerModel(GraphormerPreTrainedModel):
"""The Graphormer model is a graph-encoder model.
It goes from a graph to its representation. If you want to use the model for a downstream classification task, use
GraphormerForGraphClassification instead. For any other downstream task, feel free to add a new class, or combine
this model with a downstream model of your choice, following the example in GraphormerForGraphClassification.
"""
def __init__(self, config: GraphormerConfig):
super().__init__(config)
self.max_nodes = config.max_nodes
self.graph_encoder = GraphormerGraphEncoder(config)
self.share_input_output_embed = config.share_input_output_embed
self.lm_output_learned_bias = None
# Remove head is set to true during fine-tuning
self.load_softmax = not getattr(config, "remove_head", False)
self.lm_head_transform_weight = nn.Linear(config.embedding_dim, config.embedding_dim)
self.activation_fn = ACT2FN[config.activation_fn]
self.layer_norm = nn.LayerNorm(config.embedding_dim)
self.post_init()
def reset_output_layer_parameters(self):
self.lm_output_learned_bias = nn.Parameter(torch.zeros(1))
def forward(
self,
input_nodes: torch.LongTensor,
input_edges: torch.LongTensor,
attn_bias: torch.Tensor,
in_degree: torch.LongTensor,
out_degree: torch.LongTensor,
spatial_pos: torch.LongTensor,
attn_edge_type: torch.LongTensor,
perturb=None,
masked_tokens=None,
return_dict: Optional[bool] = None,
**unused,
) -> Union[Tuple[torch.LongTensor], BaseModelOutputWithNoAttention]:
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
inner_states, graph_rep = self.graph_encoder(
input_nodes, input_edges, attn_bias, in_degree, out_degree, spatial_pos, attn_edge_type, perturb=perturb
)
# last inner state, then revert Batch and Graph len
input_nodes = inner_states[-1].transpose(0, 1)
# project masked tokens only
if masked_tokens is not None:
raise NotImplementedError
input_nodes = self.layer_norm(self.activation_fn(self.lm_head_transform_weight(input_nodes)))
# project back to size of vocabulary
if self.share_input_output_embed and hasattr(self.graph_encoder.embed_tokens, "weight"):
input_nodes = torch.nn.functional.linear(input_nodes, self.graph_encoder.embed_tokens.weight)
if not return_dict:
return tuple(x for x in [input_nodes, inner_states] if x is not None)
return BaseModelOutputWithNoAttention(last_hidden_state=input_nodes, hidden_states=inner_states)
def max_nodes(self):
"""Maximum output length supported by the encoder."""
return self.max_nodes
class GraphormerForGraphClassification(GraphormerPreTrainedModel):
"""
This model can be used for graph-level classification or regression tasks.
It can be trained on
- regression (by setting config.num_classes to 1); there should be one float-type label per graph
- one task classification (by setting config.num_classes to the number of classes); there should be one integer
label per graph
- binary multi-task classification (by setting config.num_classes to the number of labels); there should be a list
of integer labels for each graph.
"""
def __init__(self, config: GraphormerConfig):
super().__init__(config)
self.encoder = GraphormerModel(config)
self.embedding_dim = config.embedding_dim
self.num_classes = config.num_classes
self.classifier = GraphormerDecoderHead(self.embedding_dim, self.num_classes)
self.is_encoder_decoder = True
# Initialize weights and apply final processing
self.post_init()
def forward(
self,
input_nodes: torch.LongTensor,
input_edges: torch.LongTensor,
attn_bias: torch.Tensor,
in_degree: torch.LongTensor,
out_degree: torch.LongTensor,
spatial_pos: torch.LongTensor,
attn_edge_type: torch.LongTensor,
labels: Optional[torch.LongTensor] = None,
return_dict: Optional[bool] = None,
**unused,
) -> Union[Tuple[torch.Tensor], SequenceClassifierOutput]:
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
encoder_outputs = self.encoder(
input_nodes,
input_edges,
attn_bias,
in_degree,
out_degree,
spatial_pos,
attn_edge_type,
return_dict=True,
)
outputs, hidden_states = encoder_outputs["last_hidden_state"], encoder_outputs["hidden_states"]
head_outputs = self.classifier(outputs)
logits = head_outputs[:, 0, :].contiguous()
loss = None
if labels is not None:
mask = ~torch.isnan(labels)
if self.num_classes == 1: # regression
loss_fct = MSELoss()
loss = loss_fct(logits[mask].squeeze(), labels[mask].squeeze().float())
elif self.num_classes > 1 and len(labels.shape) == 1: # One task classification
loss_fct = CrossEntropyLoss()
loss = loss_fct(logits[mask].view(-1, self.num_classes), labels[mask].view(-1))
else: # Binary multi-task classification
loss_fct = BCEWithLogitsLoss(reduction="sum")
loss = loss_fct(logits[mask], labels[mask])
if not return_dict:
return tuple(x for x in [loss, logits, hidden_states] if x is not None)
return SequenceClassifierOutput(loss=loss, logits=logits, hidden_states=hidden_states, attentions=None)
| 37,407 | 39.572668 | 136 | py |
transformers | transformers-main/src/transformers/models/graphormer/__init__.py | # Copyright 2020 The HuggingFace Team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
from typing import TYPE_CHECKING
from ...utils import OptionalDependencyNotAvailable, _LazyModule, is_tokenizers_available, is_torch_available
_import_structure = {
"configuration_graphormer": ["GRAPHORMER_PRETRAINED_CONFIG_ARCHIVE_MAP", "GraphormerConfig"],
}
try:
if not is_torch_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
_import_structure["modeling_graphormer"] = [
"GRAPHORMER_PRETRAINED_MODEL_ARCHIVE_LIST",
"GraphormerForGraphClassification",
"GraphormerModel",
"GraphormerPreTrainedModel",
]
if TYPE_CHECKING:
from .configuration_graphormer import GRAPHORMER_PRETRAINED_CONFIG_ARCHIVE_MAP, GraphormerConfig
try:
if not is_torch_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
from .modeling_graphormer import (
GRAPHORMER_PRETRAINED_MODEL_ARCHIVE_LIST,
GraphormerForGraphClassification,
GraphormerModel,
GraphormerPreTrainedModel,
)
else:
import sys
sys.modules[__name__] = _LazyModule(__name__, globals()["__file__"], _import_structure, module_spec=__spec__)
| 1,873 | 31.310345 | 113 | py |
transformers | transformers-main/src/transformers/models/xlnet/modeling_tf_xlnet.py | # coding=utf-8
# Copyright 2018 Google AI, Google Brain and Carnegie Mellon University Authors and the HuggingFace Inc. team.
# Copyright (c) 2018, NVIDIA CORPORATION. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
"""
TF 2.0 XLNet model.
"""
from __future__ import annotations
import warnings
from dataclasses import dataclass
from typing import List, Optional, Tuple, Union
import numpy as np
import tensorflow as tf
from ...activations_tf import get_tf_activation
from ...modeling_tf_utils import (
TFCausalLanguageModelingLoss,
TFModelInputType,
TFMultipleChoiceLoss,
TFPreTrainedModel,
TFQuestionAnsweringLoss,
TFSequenceClassificationLoss,
TFSequenceSummary,
TFSharedEmbeddings,
TFTokenClassificationLoss,
get_initializer,
keras_serializable,
unpack_inputs,
)
from ...tf_utils import check_embeddings_within_bounds, shape_list, stable_softmax
from ...utils import (
ModelOutput,
add_code_sample_docstrings,
add_start_docstrings,
add_start_docstrings_to_model_forward,
logging,
replace_return_docstrings,
)
from .configuration_xlnet import XLNetConfig
logger = logging.get_logger(__name__)
_CHECKPOINT_FOR_DOC = "xlnet-base-cased"
_CONFIG_FOR_DOC = "XLNetConfig"
TF_XLNET_PRETRAINED_MODEL_ARCHIVE_LIST = [
"xlnet-base-cased",
"xlnet-large-cased",
# See all XLNet models at https://huggingface.co/models?filter=xlnet
]
class TFXLNetRelativeAttention(tf.keras.layers.Layer):
def __init__(self, config, **kwargs):
super().__init__(**kwargs)
if config.d_model % config.n_head != 0:
raise ValueError(
f"The hidden size ({config.d_model}) is not a multiple of the number of attention "
f"heads ({config.n_head}"
)
self.n_head = config.n_head
self.d_head = config.d_head
self.d_model = config.d_model
self.scale = 1 / (config.d_head**0.5)
self.initializer_range = config.initializer_range
self.output_attentions = config.output_attentions
self.layer_norm = tf.keras.layers.LayerNormalization(epsilon=config.layer_norm_eps, name="layer_norm")
self.dropout = tf.keras.layers.Dropout(config.dropout)
def build(self, input_shape):
initializer = get_initializer(self.initializer_range)
self.q = self.add_weight(
shape=(self.d_model, self.n_head, self.d_head), initializer=initializer, trainable=True, name="q"
)
self.k = self.add_weight(
shape=(self.d_model, self.n_head, self.d_head), initializer=initializer, trainable=True, name="k"
)
self.v = self.add_weight(
shape=(self.d_model, self.n_head, self.d_head), initializer=initializer, trainable=True, name="v"
)
self.o = self.add_weight(
shape=(self.d_model, self.n_head, self.d_head), initializer=initializer, trainable=True, name="o"
)
self.r = self.add_weight(
shape=(self.d_model, self.n_head, self.d_head), initializer=initializer, trainable=True, name="r"
)
self.r_r_bias = self.add_weight(
shape=(self.n_head, self.d_head), initializer="zeros", trainable=True, name="r_r_bias"
)
self.r_s_bias = self.add_weight(
shape=(self.n_head, self.d_head), initializer="zeros", trainable=True, name="r_s_bias"
)
self.r_w_bias = self.add_weight(
shape=(self.n_head, self.d_head), initializer="zeros", trainable=True, name="r_w_bias"
)
self.seg_embed = self.add_weight(
shape=(2, self.n_head, self.d_head), initializer=initializer, trainable=True, name="seg_embed"
)
super().build(input_shape)
def prune_heads(self, heads):
raise NotImplementedError
def rel_shift(self, x, klen=-1):
"""perform relative shift to form the relative attention score."""
x_size = shape_list(x)
x = tf.reshape(x, (x_size[1], x_size[0], x_size[2], x_size[3]))
x = x[1:, ...]
x = tf.reshape(x, (x_size[0], x_size[1] - 1, x_size[2], x_size[3]))
x = x[:, 0:klen, :, :]
# x = torch.index_select(x, 1, torch.arange(klen, device=x.device, dtype=torch.long))
return x
def rel_attn_core(
self, q_head, k_head_h, v_head_h, k_head_r, seg_mat, attn_mask, head_mask, output_attentions, training=False
):
"""Core relative positional attention operations."""
# content based attention score
ac = tf.einsum("ibnd,jbnd->ijbn", q_head + self.r_w_bias, k_head_h)
# position based attention score
bd = tf.einsum("ibnd,jbnd->ijbn", q_head + self.r_r_bias, k_head_r)
bd = self.rel_shift(bd, klen=shape_list(ac)[1])
# segment based attention score
if seg_mat is None:
ef = 0
else:
ef = tf.einsum("ibnd,snd->ibns", q_head + self.r_s_bias, self.seg_embed)
ef = tf.einsum("ijbs,ibns->ijbn", seg_mat, ef)
# merge attention scores and perform masking
attn_score = (ac + bd + ef) * self.scale
if attn_mask is not None:
# attn_score = attn_score * (1 - attn_mask) - 1e30 * attn_mask
if attn_mask.dtype == tf.float16 or attn_mask.dtype == tf.bfloat16:
attn_score = attn_score - 65500 * attn_mask
else:
attn_score = attn_score - 1e30 * attn_mask
# attention probability
attn_prob = stable_softmax(attn_score, axis=1)
attn_prob = self.dropout(attn_prob, training=training)
# Mask heads if we want to
if head_mask is not None:
attn_prob = attn_prob * head_mask
# attention output
attn_vec = tf.einsum("ijbn,jbnd->ibnd", attn_prob, v_head_h)
if output_attentions:
return attn_vec, attn_prob
return attn_vec
def post_attention(self, h, attn_vec, residual=True, training=False):
"""Post-attention processing."""
# post-attention projection (back to `d_model`)
attn_out = tf.einsum("ibnd,hnd->ibh", attn_vec, self.o)
attn_out = self.dropout(attn_out, training=training)
if residual:
attn_out = attn_out + h
output = self.layer_norm(attn_out)
return output
def call(
self,
h,
g,
attn_mask_h,
attn_mask_g,
r,
seg_mat,
mems: np.ndarray | tf.Tensor | None = None,
target_mapping: np.ndarray | tf.Tensor | None = None,
head_mask: np.ndarray | tf.Tensor | None = None,
output_attentions: Optional[bool] = False,
training: bool = False,
):
if g is not None:
# Two-stream attention with relative positional encoding.
# content based attention score
if mems is not None and len(shape_list(mems)) > 1:
cat = tf.concat([mems, h], axis=0)
else:
cat = h
# content-based key head
k_head_h = tf.einsum("ibh,hnd->ibnd", cat, self.k)
# content-based value head
v_head_h = tf.einsum("ibh,hnd->ibnd", cat, self.v)
# position-based key head
k_head_r = tf.einsum("ibh,hnd->ibnd", r, self.r)
# h-stream
# content-stream query head
q_head_h = tf.einsum("ibh,hnd->ibnd", h, self.q)
# core attention ops
attn_vec_h = self.rel_attn_core(
q_head_h,
k_head_h,
v_head_h,
k_head_r,
seg_mat,
attn_mask_h,
head_mask,
output_attentions,
training=training,
)
if output_attentions:
attn_vec_h, attn_prob_h = attn_vec_h
# post processing
output_h = self.post_attention(h, attn_vec_h, training=training)
# g-stream
# query-stream query head
q_head_g = tf.einsum("ibh,hnd->ibnd", g, self.q)
# core attention ops
if target_mapping is not None:
q_head_g = tf.einsum("mbnd,mlb->lbnd", q_head_g, target_mapping)
attn_vec_g = self.rel_attn_core(
q_head_g,
k_head_h,
v_head_h,
k_head_r,
seg_mat,
attn_mask_g,
head_mask,
output_attentions,
training=training,
)
if output_attentions:
attn_vec_g, attn_prob_g = attn_vec_g
attn_vec_g = tf.einsum("lbnd,mlb->mbnd", attn_vec_g, target_mapping)
else:
attn_vec_g = self.rel_attn_core(
q_head_g,
k_head_h,
v_head_h,
k_head_r,
seg_mat,
attn_mask_g,
head_mask,
output_attentions,
training=training,
)
if output_attentions:
attn_vec_g, attn_prob_g = attn_vec_g
# post processing
output_g = self.post_attention(g, attn_vec_g, training=training)
if output_attentions:
attn_prob = attn_prob_h, attn_prob_g
else:
# Multi-head attention with relative positional encoding
if mems is not None and len(shape_list(mems)) > 1:
cat = tf.concat([mems, h], axis=0)
else:
cat = h
# content heads
q_head_h = tf.einsum("ibh,hnd->ibnd", h, self.q)
k_head_h = tf.einsum("ibh,hnd->ibnd", cat, self.k)
v_head_h = tf.einsum("ibh,hnd->ibnd", cat, self.v)
# positional heads
k_head_r = tf.einsum("ibh,hnd->ibnd", r, self.r)
# core attention ops
attn_vec = self.rel_attn_core(
q_head_h,
k_head_h,
v_head_h,
k_head_r,
seg_mat,
attn_mask_h,
head_mask,
output_attentions,
training=training,
)
if output_attentions:
attn_vec, attn_prob = attn_vec
# post processing
output_h = self.post_attention(h, attn_vec, training=training)
output_g = None
outputs = (output_h, output_g)
if output_attentions:
outputs = outputs + (attn_prob,)
return outputs
class TFXLNetFeedForward(tf.keras.layers.Layer):
def __init__(self, config, **kwargs):
super().__init__(**kwargs)
self.layer_norm = tf.keras.layers.LayerNormalization(epsilon=config.layer_norm_eps, name="layer_norm")
self.layer_1 = tf.keras.layers.Dense(
config.d_inner, kernel_initializer=get_initializer(config.initializer_range), name="layer_1"
)
self.layer_2 = tf.keras.layers.Dense(
config.d_model, kernel_initializer=get_initializer(config.initializer_range), name="layer_2"
)
self.dropout = tf.keras.layers.Dropout(config.dropout)
if isinstance(config.ff_activation, str):
self.activation_function = get_tf_activation(config.ff_activation)
else:
self.activation_function = config.ff_activation
def call(self, inp, training=False):
output = inp
output = self.layer_1(output)
output = self.activation_function(output)
output = self.dropout(output, training=training)
output = self.layer_2(output)
output = self.dropout(output, training=training)
output = self.layer_norm(output + inp)
return output
class TFXLNetLayer(tf.keras.layers.Layer):
def __init__(self, config, **kwargs):
super().__init__(**kwargs)
self.rel_attn = TFXLNetRelativeAttention(config, name="rel_attn")
self.ff = TFXLNetFeedForward(config, name="ff")
self.dropout = tf.keras.layers.Dropout(config.dropout)
def call(
self,
output_h,
output_g,
non_tgt_mask,
attn_mask,
pos_emb,
seg_mat,
mems: np.ndarray | tf.Tensor | None = None,
target_mapping: np.ndarray | tf.Tensor | None = None,
head_mask: np.ndarray | tf.Tensor | None = None,
output_attentions: Optional[bool] = False,
training: bool = False,
):
outputs = self.rel_attn(
output_h,
output_g,
non_tgt_mask,
attn_mask,
pos_emb,
seg_mat,
mems,
target_mapping,
head_mask,
output_attentions,
training=training,
)
output_h, output_g = outputs[:2]
if output_g is not None:
output_g = self.ff(output_g, training=training)
output_h = self.ff(output_h, training=training)
outputs = (output_h, output_g) + outputs[2:] # Add again attentions if there are there
return outputs
class TFXLNetLMHead(tf.keras.layers.Layer):
def __init__(self, config, input_embeddings, **kwargs):
super().__init__(**kwargs)
self.config = config
# The output weights are the same as the input embeddings, but there is
# an output-only bias for each token.
self.input_embeddings = input_embeddings
def build(self, input_shape):
self.bias = self.add_weight(shape=(self.config.vocab_size,), initializer="zeros", trainable=True, name="bias")
super().build(input_shape)
def get_output_embeddings(self):
return self.input_embeddings
def set_output_embeddings(self, value):
self.input_embeddings.weight = value
self.input_embeddings.vocab_size = shape_list(value)[0]
def get_bias(self):
return {"bias": self.bias}
def set_bias(self, value):
self.bias = value["bias"]
self.config.vocab_size = shape_list(value["bias"])[0]
def call(self, hidden_states):
hidden_states = self.input_embeddings(hidden_states, mode="linear")
hidden_states = hidden_states + self.bias
return hidden_states
@keras_serializable
class TFXLNetMainLayer(tf.keras.layers.Layer):
config_class = XLNetConfig
def __init__(self, config, **kwargs):
super().__init__(**kwargs)
self.config = config
self.output_hidden_states = config.output_hidden_states
self.output_attentions = config.output_attentions
self.return_dict = config.return_dict
self.mem_len = config.mem_len
self.reuse_len = config.reuse_len
self.d_model = config.d_model
self.same_length = config.same_length
self.attn_type = config.attn_type
self.bi_data = config.bi_data
self.clamp_len = config.clamp_len
self.n_layer = config.n_layer
self.use_bfloat16 = config.use_bfloat16
self.initializer_range = config.initializer_range
self.word_embedding = TFSharedEmbeddings(
config.vocab_size, config.d_model, initializer_range=config.initializer_range, name="word_embedding"
)
self.layer = [TFXLNetLayer(config, name=f"layer_._{i}") for i in range(config.n_layer)]
self.dropout = tf.keras.layers.Dropout(config.dropout)
self.use_mems_eval = config.use_mems_eval
self.use_mems_train = config.use_mems_train
def get_input_embeddings(self):
return self.word_embedding
def set_input_embeddings(self, value):
self.word_embedding.weight = value
self.word_embedding.vocab_size = shape_list(value)[0]
def build(self, input_shape):
initializer = get_initializer(self.initializer_range)
self.mask_emb = self.add_weight(
shape=(1, 1, self.d_model), initializer=initializer, trainable=True, name="mask_emb"
)
super().build(input_shape)
def _prune_heads(self, heads_to_prune):
raise NotImplementedError
def create_mask(self, qlen, mlen):
"""
Creates causal attention mask. Float mask where 1.0 indicates masked, 0.0 indicates not-masked.
Args:
qlen: TODO Lysandre didn't fill
mlen: TODO Lysandre didn't fill
```
same_length=False: same_length=True:
<mlen > < qlen > <mlen > < qlen >
^ [0 0 0 0 0 1 1 1 1] [0 0 0 0 0 1 1 1 1]
[0 0 0 0 0 0 1 1 1] [1 0 0 0 0 0 1 1 1]
qlen [0 0 0 0 0 0 0 1 1] [1 1 0 0 0 0 0 1 1]
[0 0 0 0 0 0 0 0 1] [1 1 1 0 0 0 0 0 1]
v [0 0 0 0 0 0 0 0 0] [1 1 1 1 0 0 0 0 0]
```
"""
attn_mask = tf.ones([qlen, qlen])
mask_u = tf.linalg.band_part(attn_mask, 0, -1)
mask_dia = tf.linalg.band_part(attn_mask, 0, 0)
attn_mask_pad = tf.zeros([qlen, mlen])
ret = tf.concat([attn_mask_pad, mask_u - mask_dia], 1)
if self.same_length:
mask_l = tf.linalg.band_part(attn_mask, -1, 0)
ret = tf.concat([ret[:, :qlen] + mask_l - mask_dia, ret[:, qlen:]], 1)
return ret
def cache_mem(self, curr_out, prev_mem):
# cache hidden states into memory.
if self.reuse_len is not None and self.reuse_len > 0:
curr_out = curr_out[: self.reuse_len]
if self.mem_len is None or self.mem_len == 0:
# If `use_mems` is active but no `mem_len` is defined, the model behaves like GPT-2 at inference time
# and returns all of the past and current hidden states.
cutoff = 0
else:
# If `use_mems` is active and `mem_len` is defined, the model returns the last `mem_len` hidden
# states. This is the preferred setting for training and long-form generation.
cutoff = -self.mem_len
if prev_mem is None:
# if `use_mems` is active and `mem_len` is defined, the model
new_mem = curr_out[cutoff:]
else:
new_mem = tf.concat([prev_mem, curr_out], 0)[cutoff:]
return tf.stop_gradient(new_mem)
@staticmethod
def positional_embedding(pos_seq, inv_freq, bsz=None):
sinusoid_inp = tf.einsum("i,d->id", pos_seq, inv_freq)
pos_emb = tf.concat([tf.sin(sinusoid_inp), tf.cos(sinusoid_inp)], axis=-1)
pos_emb = pos_emb[:, None, :]
if bsz is not None:
pos_emb = tf.tile(pos_emb, [1, bsz, 1])
return pos_emb
def relative_positional_encoding(self, qlen, klen, bsz=None):
"""create relative positional encoding."""
freq_seq = tf.range(0, self.d_model, 2.0)
inv_freq = 1 / (10000 ** (freq_seq / self.d_model))
if self.attn_type == "bi":
# beg, end = klen - 1, -qlen
beg, end = klen, -qlen
elif self.attn_type == "uni":
# beg, end = klen - 1, -1
beg, end = klen, -1
else:
raise ValueError(f"Unknown `attn_type` {self.attn_type}.")
if self.bi_data:
fwd_pos_seq = tf.range(beg, end, -1.0)
bwd_pos_seq = tf.range(-beg, -end, 1.0)
if self.clamp_len > 0:
fwd_pos_seq = tf.clip_by_value(fwd_pos_seq, -self.clamp_len, self.clamp_len)
bwd_pos_seq = tf.clip_by_value(bwd_pos_seq, -self.clamp_len, self.clamp_len)
if bsz is not None:
if bsz % 2 != 0:
raise ValueError(f"With bi_data, the batch size {bsz} should be divisible by 2")
fwd_pos_emb = self.positional_embedding(fwd_pos_seq, inv_freq, bsz // 2)
bwd_pos_emb = self.positional_embedding(bwd_pos_seq, inv_freq, bsz // 2)
else:
fwd_pos_emb = self.positional_embedding(fwd_pos_seq, inv_freq)
bwd_pos_emb = self.positional_embedding(bwd_pos_seq, inv_freq)
pos_emb = tf.concat([fwd_pos_emb, bwd_pos_emb], axis=1)
else:
fwd_pos_seq = tf.range(beg, end, -1.0)
if self.clamp_len > 0:
fwd_pos_seq = tf.clip_by_value(fwd_pos_seq, -self.clamp_len, self.clamp_len)
pos_emb = self.positional_embedding(fwd_pos_seq, inv_freq, bsz)
return pos_emb
@unpack_inputs
def call(
self,
input_ids: TFModelInputType | None = None,
attention_mask: np.ndarray | tf.Tensor | None = None,
mems: np.ndarray | tf.Tensor | None = None,
perm_mask: np.ndarray | tf.Tensor | None = None,
target_mapping: np.ndarray | tf.Tensor | None = None,
token_type_ids: np.ndarray | tf.Tensor | None = None,
input_mask: np.ndarray | tf.Tensor | None = None,
head_mask: np.ndarray | tf.Tensor | None = None,
inputs_embeds: np.ndarray | tf.Tensor | None = None,
use_mems: Optional[bool] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
training: bool = False,
):
if training and use_mems is None:
use_mems = self.use_mems_train
else:
use_mems = self.use_mems_eval
# the original code for XLNet uses shapes [len, bsz] with the batch dimension at the end
# but we want a unified interface in the library with the batch size on the first dimension
# so we move here the first dimension (batch) to the end
if input_ids is not None and inputs_embeds is not None:
raise ValueError("You cannot specify both input_ids and inputs_embeds at the same time")
elif input_ids is not None:
input_ids = tf.transpose(input_ids, perm=(1, 0))
qlen, bsz = shape_list(input_ids)[:2]
elif inputs_embeds is not None:
inputs_embeds = tf.transpose(inputs_embeds, perm=(1, 0, 2))
qlen, bsz = shape_list(inputs_embeds)[:2]
else:
raise ValueError("You have to specify either input_ids or inputs_embeds")
token_type_ids = tf.transpose(token_type_ids, perm=(1, 0)) if token_type_ids is not None else None
input_mask = tf.transpose(input_mask, perm=(1, 0)) if input_mask is not None else None
attention_mask = tf.transpose(attention_mask, perm=(1, 0)) if attention_mask is not None else None
perm_mask = tf.transpose(perm_mask, perm=(1, 2, 0)) if perm_mask is not None else None
target_mapping = tf.transpose(target_mapping, perm=(1, 2, 0)) if target_mapping is not None else None
mlen = shape_list(mems[0])[0] if mems is not None and mems[0] is not None else 0
klen = mlen + qlen
# Attention mask
# causal attention mask
if self.attn_type == "uni":
attn_mask = self.create_mask(qlen, mlen)
attn_mask = attn_mask[:, :, None, None]
elif self.attn_type == "bi":
attn_mask = None
else:
raise ValueError(f"Unsupported attention type: {self.attn_type}")
# data mask: input mask & perm mask
assert input_mask is None or attention_mask is None, (
"You can only use one of input_mask (uses 1 for padding) "
"or attention_mask (uses 0 for padding, added for compatibility with BERT). Please choose one."
)
if input_mask is None and attention_mask is not None:
one_cst = tf.constant(1.0)
input_mask = 1.0 - tf.cast(attention_mask, dtype=one_cst.dtype)
if input_mask is not None and perm_mask is not None:
data_mask = input_mask[None] + perm_mask
elif input_mask is not None and perm_mask is None:
data_mask = input_mask[None]
elif input_mask is None and perm_mask is not None:
data_mask = perm_mask
else:
data_mask = None
if data_mask is not None:
# all mems can be attended to
if mlen > 0:
mems_mask = tf.zeros([shape_list(data_mask)[0], mlen, bsz])
data_mask = tf.concat([mems_mask, data_mask], axis=1)
if attn_mask is None:
attn_mask = data_mask[:, :, :, None]
else:
attn_mask += data_mask[:, :, :, None]
if attn_mask is not None:
attn_mask = tf.cast(attn_mask > 0, dtype=attn_mask.dtype)
if attn_mask is not None:
non_tgt_mask = -tf.eye(qlen)
if mlen > 0:
non_tgt_mask = tf.concat([tf.zeros([qlen, mlen]), non_tgt_mask], axis=-1)
non_tgt_mask = tf.cast((attn_mask + non_tgt_mask[:, :, None, None]) > 0, dtype=non_tgt_mask.dtype)
else:
non_tgt_mask = None
# Word embeddings and prepare h & g hidden states
if inputs_embeds is not None:
word_emb_k = inputs_embeds
else:
check_embeddings_within_bounds(input_ids, self.word_embedding.vocab_size)
word_emb_k = self.word_embedding(input_ids)
output_h = self.dropout(word_emb_k, training=training)
if target_mapping is not None:
word_emb_q = tf.tile(self.mask_emb, [shape_list(target_mapping)[0], bsz, 1])
# else: # We removed the inp_q input which was same as target mapping
# inp_q_ext = inp_q[:, :, None]
# word_emb_q = inp_q_ext * self.mask_emb + (1 - inp_q_ext) * word_emb_k
output_g = self.dropout(word_emb_q, training=training)
else:
output_g = None
# Segment embedding
if token_type_ids is not None:
# Convert `token_type_ids` to one-hot `seg_mat`
if mlen > 0:
mem_pad = tf.zeros([mlen, bsz], dtype=token_type_ids.dtype)
cat_ids = tf.concat([mem_pad, token_type_ids], 0)
else:
cat_ids = token_type_ids
# `1` indicates not in the same segment [qlen x klen x bsz]
seg_mat = tf.cast(
tf.logical_not(tf.equal(token_type_ids[:, None], cat_ids[None, :])),
dtype=token_type_ids.dtype,
)
seg_mat = tf.one_hot(seg_mat, 2)
else:
seg_mat = None
# Positional encoding
pos_emb = self.relative_positional_encoding(qlen, klen, bsz=bsz)
pos_emb = self.dropout(pos_emb, training=training)
# Prepare head mask if needed
# 1.0 in head_mask indicate we keep the head
# attention_probs has shape bsz x n_heads x N x N
# input head_mask has shape [num_heads] or [num_hidden_layers x num_heads] (a head_mask for each layer)
# and head_mask is converted to shape [num_hidden_layers x qlen x klen x bsz x n_head]
if head_mask is not None:
raise NotImplementedError
else:
head_mask = [None] * self.n_layer
new_mems = ()
if mems is None:
mems = [None] * len(self.layer)
attentions = [] if output_attentions else None
hidden_states = [] if output_hidden_states else None
for i, layer_module in enumerate(self.layer):
# cache new mems
if use_mems:
new_mems = new_mems + (self.cache_mem(output_h, mems[i]),)
if output_hidden_states:
hidden_states.append((output_h, output_g) if output_g is not None else output_h)
outputs = layer_module(
output_h,
output_g,
non_tgt_mask,
attn_mask,
pos_emb,
seg_mat,
mems[i],
target_mapping,
head_mask[i],
output_attentions,
training=training,
)
output_h, output_g = outputs[:2]
if output_attentions:
attentions.append(outputs[2])
# Add last hidden state
if output_hidden_states:
hidden_states.append((output_h, output_g) if output_g is not None else output_h)
output = self.dropout(output_g if output_g is not None else output_h, training=training)
# Prepare outputs, we transpose back here to shape [bsz, len, hidden_dim] (cf. beginning of forward() method)
output = tf.transpose(output, perm=(1, 0, 2))
if not use_mems:
new_mems = None
if output_hidden_states:
if output_g is not None:
hidden_states = tuple(tf.transpose(h, perm=(1, 0, 2)) for hs in hidden_states for h in hs)
else:
hidden_states = tuple(tf.transpose(hs, perm=(1, 0, 2)) for hs in hidden_states)
if output_attentions:
if target_mapping is not None:
# when target_mapping is provided, there are 2-tuple of attentions
attentions = tuple(
tuple(tf.transpose(attn_stream, perm=(2, 3, 0, 1)) for attn_stream in t) for t in attentions
)
else:
attentions = tuple(tf.transpose(t, perm=(2, 3, 0, 1)) for t in attentions)
if not return_dict:
return tuple(v for v in [output, new_mems, hidden_states, attentions] if v is not None)
return TFXLNetModelOutput(
last_hidden_state=output, mems=new_mems, hidden_states=hidden_states, attentions=attentions
)
class TFXLNetPreTrainedModel(TFPreTrainedModel):
"""
An abstract class to handle weights initialization and a simple interface for downloading and loading pretrained
models.
"""
config_class = XLNetConfig
base_model_prefix = "transformer"
@dataclass
class TFXLNetModelOutput(ModelOutput):
"""
Output type of [`TFXLNetModel`].
Args:
last_hidden_state (`tf.Tensor` of shape `(batch_size, num_predict, hidden_size)`):
Sequence of hidden-states at the last layer of the model.
`num_predict` corresponds to `target_mapping.shape[1]`. If `target_mapping` is `None`, then `num_predict`
corresponds to `sequence_length`.
mems (`List[tf.Tensor]` of length `config.n_layers`):
Contains pre-computed hidden-states. Can be used (see `mems` input) to speed up sequential decoding. The
token ids which have their past given to this model should not be passed as `input_ids` as they have
already been computed.
hidden_states (`tuple(tf.Tensor)`, *optional*, returned when `output_hidden_states=True` is passed or when `config.output_hidden_states=True`):
Tuple of `tf.Tensor` (one for the output of the embeddings + one for the output of each layer) of shape
`(batch_size, sequence_length, hidden_size)`.
Hidden-states of the model at the output of each layer plus the initial embedding outputs.
attentions (`tuple(tf.Tensor)`, *optional*, returned when `output_attentions=True` is passed or when `config.output_attentions=True`):
Tuple of `tf.Tensor` (one for each layer) of shape `(batch_size, num_heads, sequence_length,
sequence_length)`.
Attentions weights after the attention softmax, used to compute the weighted average in the self-attention
heads.
"""
last_hidden_state: tf.Tensor = None
mems: List[tf.Tensor] | None = None
hidden_states: Tuple[tf.Tensor] | None = None
attentions: Tuple[tf.Tensor] | None = None
@dataclass
class TFXLNetLMHeadModelOutput(ModelOutput):
"""
Output type of [`TFXLNetLMHeadModel`].
Args:
loss (`tf.Tensor` of shape *(1,)*, *optional*, returned when `labels` is provided)
Language modeling loss (for next-token prediction).
logits (`tf.Tensor` of shape `(batch_size, num_predict, config.vocab_size)`):
Prediction scores of the language modeling head (scores for each vocabulary token before SoftMax).
`num_predict` corresponds to `target_mapping.shape[1]`. If `target_mapping` is `None`, then `num_predict`
corresponds to `sequence_length`.
mems (`List[tf.Tensor]` of length `config.n_layers`):
Contains pre-computed hidden-states. Can be used (see `mems` input) to speed up sequential decoding. The
token ids which have their past given to this model should not be passed as `input_ids` as they have
already been computed.
hidden_states (`tuple(tf.Tensor)`, *optional*, returned when `output_hidden_states=True` is passed or when `config.output_hidden_states=True`):
Tuple of `tf.Tensor` (one for the output of the embeddings + one for the output of each layer) of shape
`(batch_size, sequence_length, hidden_size)`.
Hidden-states of the model at the output of each layer plus the initial embedding outputs.
attentions (`tuple(tf.Tensor)`, *optional*, returned when `output_attentions=True` is passed or when `config.output_attentions=True`):
Tuple of `tf.Tensor` (one for each layer) of shape `(batch_size, num_heads, sequence_length,
sequence_length)`.
Attentions weights after the attention softmax, used to compute the weighted average in the self-attention
heads.
"""
loss: tf.Tensor | None = None
logits: tf.Tensor = None
mems: List[tf.Tensor] | None = None
hidden_states: Tuple[tf.Tensor] | None = None
attentions: Tuple[tf.Tensor] | None = None
@dataclass
class TFXLNetForSequenceClassificationOutput(ModelOutput):
"""
Output type of [`TFXLNetForSequenceClassification`].
Args:
loss (`tf.Tensor` of shape `(1,)`, *optional*, returned when `label` is provided):
Classification (or regression if config.num_labels==1) loss.
logits (`tf.Tensor` of shape `(batch_size, config.num_labels)`):
Classification (or regression if config.num_labels==1) scores (before SoftMax).
mems (`List[tf.Tensor]` of length `config.n_layers`):
Contains pre-computed hidden-states. Can be used (see `mems` input) to speed up sequential decoding. The
token ids which have their past given to this model should not be passed as `input_ids` as they have
already been computed.
hidden_states (`tuple(tf.Tensor)`, *optional*, returned when `output_hidden_states=True` is passed or when `config.output_hidden_states=True`):
Tuple of `tf.Tensor` (one for the output of the embeddings + one for the output of each layer) of shape
`(batch_size, sequence_length, hidden_size)`.
Hidden-states of the model at the output of each layer plus the initial embedding outputs.
attentions (`tuple(tf.Tensor)`, *optional*, returned when `output_attentions=True` is passed or when `config.output_attentions=True`):
Tuple of `tf.Tensor` (one for each layer) of shape `(batch_size, num_heads, sequence_length,
sequence_length)`.
Attentions weights after the attention softmax, used to compute the weighted average in the self-attention
heads.
"""
loss: tf.Tensor | None = None
logits: tf.Tensor = None
mems: List[tf.Tensor] | None = None
hidden_states: Tuple[tf.Tensor] | None = None
attentions: Tuple[tf.Tensor] | None = None
@dataclass
class TFXLNetForTokenClassificationOutput(ModelOutput):
"""
Output type of [`TFXLNetForTokenClassificationOutput`].
Args:
loss (`tf.Tensor` of shape `(1,)`, *optional*, returned when `labels` is provided) :
Classification loss.
logits (`tf.Tensor` of shape `(batch_size, sequence_length, config.num_labels)`):
Classification scores (before SoftMax).
mems (`List[tf.Tensor]` of length `config.n_layers`):
Contains pre-computed hidden-states. Can be used (see `mems` input) to speed up sequential decoding. The
token ids which have their past given to this model should not be passed as `input_ids` as they have
already been computed.
hidden_states (`tuple(tf.Tensor)`, *optional*, returned when `output_hidden_states=True` is passed or when `config.output_hidden_states=True`):
Tuple of `tf.Tensor` (one for the output of the embeddings + one for the output of each layer) of shape
`(batch_size, sequence_length, hidden_size)`.
Hidden-states of the model at the output of each layer plus the initial embedding outputs.
attentions (`tuple(tf.Tensor)`, *optional*, returned when `output_attentions=True` is passed or when `config.output_attentions=True`):
Tuple of `tf.Tensor` (one for each layer) of shape `(batch_size, num_heads, sequence_length,
sequence_length)`.
Attentions weights after the attention softmax, used to compute the weighted average in the self-attention
heads.
"""
loss: tf.Tensor | None = None
logits: tf.Tensor = None
mems: List[tf.Tensor] | None = None
hidden_states: Tuple[tf.Tensor] | None = None
attentions: Tuple[tf.Tensor] | None = None
@dataclass
class TFXLNetForMultipleChoiceOutput(ModelOutput):
"""
Output type of [`TFXLNetForMultipleChoice`].
Args:
loss (`tf.Tensor` of shape *(1,)*, *optional*, returned when `labels` is provided):
Classification loss.
logits (`tf.Tensor` of shape `(batch_size, num_choices)`):
*num_choices* is the second dimension of the input tensors. (see *input_ids* above).
Classification scores (before SoftMax).
mems (`List[tf.Tensor]` of length `config.n_layers`):
Contains pre-computed hidden-states. Can be used (see `mems` input) to speed up sequential decoding. The
token ids which have their past given to this model should not be passed as `input_ids` as they have
already been computed.
hidden_states (`tuple(tf.Tensor)`, *optional*, returned when `output_hidden_states=True` is passed or when `config.output_hidden_states=True`):
Tuple of `tf.Tensor` (one for the output of the embeddings + one for the output of each layer) of shape
`(batch_size, sequence_length, hidden_size)`.
Hidden-states of the model at the output of each layer plus the initial embedding outputs.
attentions (`tuple(tf.Tensor)`, *optional*, returned when `output_attentions=True` is passed or when `config.output_attentions=True`):
Tuple of `tf.Tensor` (one for each layer) of shape `(batch_size, num_heads, sequence_length,
sequence_length)`.
Attentions weights after the attention softmax, used to compute the weighted average in the self-attention
heads.
"""
loss: tf.Tensor | None = None
logits: tf.Tensor = None
mems: List[tf.Tensor] | None = None
hidden_states: Tuple[tf.Tensor] | None = None
attentions: Tuple[tf.Tensor] | None = None
@dataclass
class TFXLNetForQuestionAnsweringSimpleOutput(ModelOutput):
"""
Output type of [`TFXLNetForQuestionAnsweringSimple`].
Args:
loss (`tf.Tensor` of shape `(1,)`, *optional*, returned when `labels` is provided):
Total span extraction loss is the sum of a Cross-Entropy for the start and end positions.
start_logits (`tf.Tensor` of shape `(batch_size, sequence_length,)`):
Span-start scores (before SoftMax).
end_logits (`tf.Tensor` of shape `(batch_size, sequence_length,)`):
Span-end scores (before SoftMax).
mems (`List[tf.Tensor]` of length `config.n_layers`):
Contains pre-computed hidden-states. Can be used (see `mems` input) to speed up sequential decoding. The
token ids which have their past given to this model should not be passed as `input_ids` as they have
already been computed.
hidden_states (`tuple(tf.Tensor)`, *optional*, returned when `output_hidden_states=True` is passed or when `config.output_hidden_states=True`):
Tuple of `tf.Tensor` (one for the output of the embeddings + one for the output of each layer) of shape
`(batch_size, sequence_length, hidden_size)`.
Hidden-states of the model at the output of each layer plus the initial embedding outputs.
attentions (`tuple(tf.Tensor)`, *optional*, returned when `output_attentions=True` is passed or when `config.output_attentions=True`):
Tuple of `tf.Tensor` (one for each layer) of shape `(batch_size, num_heads, sequence_length,
sequence_length)`.
Attentions weights after the attention softmax, used to compute the weighted average in the self-attention
heads.
"""
loss: tf.Tensor | None = None
start_logits: tf.Tensor = None
end_logits: tf.Tensor = None
mems: List[tf.Tensor] | None = None
hidden_states: Tuple[tf.Tensor] | None = None
attentions: Tuple[tf.Tensor] | None = None
XLNET_START_DOCSTRING = r"""
This model inherits from [`TFPreTrainedModel`]. Check the superclass documentation for the generic methods the
library implements for all its model (such as downloading or saving, resizing the input embeddings, pruning heads
etc.)
This model is also a [tf.keras.Model](https://www.tensorflow.org/api_docs/python/tf/keras/Model) subclass. Use it
as a regular TF 2.0 Keras Model and refer to the TF 2.0 documentation for all matter related to general usage and
behavior.
<Tip>
TensorFlow models and layers in `transformers` accept two formats as input:
- having all inputs as keyword arguments (like PyTorch models), or
- having all inputs as a list, tuple or dict in the first positional argument.
The reason the second format is supported is that Keras methods prefer this format when passing inputs to models
and layers. Because of this support, when using methods like `model.fit()` things should "just work" for you - just
pass your inputs and labels in any format that `model.fit()` supports! If, however, you want to use the second
format outside of Keras methods like `fit()` and `predict()`, such as when creating your own layers or models with
the Keras `Functional` API, there are three possibilities you can use to gather all the input Tensors in the first
positional argument:
- a single Tensor with `input_ids` only and nothing else: `model(input_ids)`
- a list of varying length with one or several input Tensors IN THE ORDER given in the docstring:
`model([input_ids, attention_mask])` or `model([input_ids, attention_mask, token_type_ids])`
- a dictionary with one or several input Tensors associated to the input names given in the docstring:
`model({"input_ids": input_ids, "token_type_ids": token_type_ids})`
Note that when creating models and layers with
[subclassing](https://keras.io/guides/making_new_layers_and_models_via_subclassing/) then you don't need to worry
about any of this, as you can just pass inputs like you would to any other Python function!
</Tip>
Parameters:
config ([`XLNetConfig`]): Model configuration class with all the parameters of the model.
Initializing with a config file does not load the weights associated with the model, only the
configuration. Check out the [`~PreTrainedModel.from_pretrained`] method to load the model weights.
"""
XLNET_INPUTS_DOCSTRING = r"""
Args:
input_ids (`torch.LongTensor` of shape `({0})`):
Indices of input sequence tokens in the vocabulary.
Indices can be obtained using [`AutoTokenizer`]. See [`PreTrainedTokenizer.encode`] and
[`PreTrainedTokenizer.__call__`] for details.
[What are input IDs?](../glossary#input-ids)
attention_mask (`torch.FloatTensor` of shape `({0})`, *optional*):
Mask to avoid performing attention on padding token indices. Mask values selected in `[0, 1]`:
- 1 for tokens that are **not masked**,
- 0 for tokens that are **masked**.
[What are attention masks?](../glossary#attention-mask)
mems (`List[torch.FloatTensor]` of length `config.n_layers`):
Contains pre-computed hidden-states (see `mems` output below) . Can be used to speed up sequential
decoding. The token ids which have their past given to this model should not be passed as `input_ids` as
they have already been computed.
`use_mems` has to be set to `True` to make use of `mems`.
perm_mask (`torch.FloatTensor` of shape `(batch_size, sequence_length, sequence_length)`, *optional*):
Mask to indicate the attention pattern for each input token with values selected in `[0, 1]`:
- if `perm_mask[k, i, j] = 0`, i attend to j in batch k;
- if `perm_mask[k, i, j] = 1`, i does not attend to j in batch k.
If not set, each token attends to all the others (full bidirectional attention). Only used during
pretraining (to define factorization order) or for sequential decoding (generation).
target_mapping (`torch.FloatTensor` of shape `(batch_size, num_predict, sequence_length)`, *optional*):
Mask to indicate the output tokens to use. If `target_mapping[k, i, j] = 1`, the i-th predict in batch k is
on the j-th token. Only used during pretraining for partial prediction or for sequential decoding
(generation).
token_type_ids (`torch.LongTensor` of shape `({0})`, *optional*):
Segment token indices to indicate first and second portions of the inputs. Indices are selected in `[0,
1]`:
- 0 corresponds to a *sentence A* token,
- 1 corresponds to a *sentence B* token.
[What are token type IDs?](../glossary#token-type-ids)
input_mask (`torch.FloatTensor` of shape `{0}`, *optional*):
Mask to avoid performing attention on padding token indices. Negative of `attention_mask`, i.e. with 0 for
real tokens and 1 for padding which is kept for compatibility with the original code base.
Mask values selected in `[0, 1]`:
- 1 for tokens that are **masked**,
- 0 for tokens that are **not masked**.
You can only uses one of `input_mask` and `attention_mask`.
head_mask (`torch.FloatTensor` of shape `(num_heads,)` or `(num_layers, num_heads)`, *optional*):
Mask to nullify selected heads of the self-attention modules. Mask values selected in `[0, 1]`:
- 1 indicates the head is **not masked**,
- 0 indicates the head is **masked**.
inputs_embeds (`torch.FloatTensor` of shape `({0}, hidden_size)`, *optional*):
Optionally, instead of passing `input_ids` you can choose to directly pass an embedded representation. This
is useful if you want more control over how to convert `input_ids` indices into associated vectors than the
model's internal embedding lookup matrix.
output_attentions (`bool`, *optional*):
Whether or not to return the attentions tensors of all attention layers. See `attentions` under returned
tensors for more detail.
output_hidden_states (`bool`, *optional*):
Whether or not to return the hidden states of all layers. See `hidden_states` under returned tensors for
more detail.
return_dict (`bool`, *optional*):
Whether or not to return a [`~utils.ModelOutput`] instead of a plain tuple.
"""
@add_start_docstrings(
"The bare XLNet Model transformer outputting raw hidden-states without any specific head on top.",
XLNET_START_DOCSTRING,
)
class TFXLNetModel(TFXLNetPreTrainedModel):
def __init__(self, config, *inputs, **kwargs):
super().__init__(config, *inputs, **kwargs)
self.transformer = TFXLNetMainLayer(config, name="transformer")
@unpack_inputs
@add_start_docstrings_to_model_forward(XLNET_INPUTS_DOCSTRING.format("batch_size, sequence_length"))
@add_code_sample_docstrings(
checkpoint=_CHECKPOINT_FOR_DOC,
output_type=TFXLNetModelOutput,
config_class=_CONFIG_FOR_DOC,
)
def call(
self,
input_ids: TFModelInputType | None = None,
attention_mask: np.ndarray | tf.Tensor | None = None,
mems: np.ndarray | tf.Tensor | None = None,
perm_mask: np.ndarray | tf.Tensor | None = None,
target_mapping: np.ndarray | tf.Tensor | None = None,
token_type_ids: np.ndarray | tf.Tensor | None = None,
input_mask: np.ndarray | tf.Tensor | None = None,
head_mask: np.ndarray | tf.Tensor | None = None,
inputs_embeds: np.ndarray | tf.Tensor | None = None,
use_mems: Optional[bool] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
training: bool = False,
) -> Union[TFXLNetModelOutput, Tuple[tf.Tensor]]:
outputs = self.transformer(
input_ids=input_ids,
attention_mask=attention_mask,
mems=mems,
perm_mask=perm_mask,
target_mapping=target_mapping,
token_type_ids=token_type_ids,
input_mask=input_mask,
head_mask=head_mask,
inputs_embeds=inputs_embeds,
use_mems=use_mems,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
training=training,
)
return outputs
@add_start_docstrings(
"""
XLNet Model with a language modeling head on top (linear layer with weights tied to the input embeddings).
""",
XLNET_START_DOCSTRING,
)
class TFXLNetLMHeadModel(TFXLNetPreTrainedModel, TFCausalLanguageModelingLoss):
def __init__(self, config, *inputs, **kwargs):
super().__init__(config, *inputs, **kwargs)
self.transformer = TFXLNetMainLayer(config, name="transformer")
self.lm_loss = TFXLNetLMHead(config, self.transformer.word_embedding, name="lm_loss")
# generate fails to convert to a graph with XLNet
self.supports_xla_generation = False
def get_lm_head(self):
return self.lm_loss
def get_prefix_bias_name(self):
warnings.warn("The method get_prefix_bias_name is deprecated. Please use `get_bias` instead.", FutureWarning)
return self.name + "/" + self.lm_loss.name
def prepare_inputs_for_generation(self, inputs, past_key_values=None, use_mems=None, **kwargs):
# Add dummy token at the end (no attention on this one)
effective_batch_size = inputs.shape[0]
dummy_token = tf.zeros((effective_batch_size, 1), dtype=inputs.dtype)
# At every pass, the attention values for the new token and the two last generated tokens
# are computed, the rest is reloaded from the `past` cache. A purely auto-regressive model would have
# offset = 1; offset = 2 seems to have slightly better computation.
offset = 2
if past_key_values:
input_ids = tf.concat([inputs[:, -offset:], dummy_token], axis=1)
else:
input_ids = tf.concat([inputs, dummy_token], axis=1)
# Build permutation mask so that previous tokens don't see last token
sequence_length = input_ids.shape[1]
perm_mask = tf.zeros((effective_batch_size, sequence_length, sequence_length - 1))
perm_mask_seq_end = tf.ones((effective_batch_size, sequence_length, 1))
perm_mask = tf.concat([perm_mask, perm_mask_seq_end], axis=-1)
# We'll only predict the last token
target_mapping = tf.zeros((effective_batch_size, 1, sequence_length - 1))
target_mapping_seq_end = tf.ones((effective_batch_size, 1, 1))
target_mapping = tf.concat([target_mapping, target_mapping_seq_end], axis=-1)
inputs = {
"input_ids": input_ids,
"perm_mask": perm_mask,
"target_mapping": target_mapping,
"use_mems": use_mems,
}
# if past is defined in model kwargs then use it for faster decoding
if past_key_values:
inputs["mems"] = tuple(layer_past[:-offset, :, :] for layer_past in past_key_values)
return inputs
@unpack_inputs
@add_start_docstrings_to_model_forward(XLNET_INPUTS_DOCSTRING.format("batch_size, sequence_length"))
@replace_return_docstrings(output_type=TFXLNetLMHeadModelOutput, config_class=_CONFIG_FOR_DOC)
def call(
self,
input_ids: TFModelInputType | None = None,
attention_mask: np.ndarray | tf.Tensor | None = None,
mems: np.ndarray | tf.Tensor | None = None,
perm_mask: np.ndarray | tf.Tensor | None = None,
target_mapping: np.ndarray | tf.Tensor | None = None,
token_type_ids: np.ndarray | tf.Tensor | None = None,
input_mask: np.ndarray | tf.Tensor | None = None,
head_mask: np.ndarray | tf.Tensor | None = None,
inputs_embeds: np.ndarray | tf.Tensor | None = None,
use_mems: Optional[bool] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
labels: np.ndarray | tf.Tensor | None = None,
training: bool = False,
) -> Union[TFXLNetLMHeadModelOutput, Tuple[tf.Tensor]]:
r"""
labels (`tf.Tensor` of shape `(batch_size, sequence_length)`, *optional*):
Labels for computing the cross entropy classification loss. Indices should be in `[0, ...,
config.vocab_size - 1]`.
Return:
Examples:
```python
>>> import tensorflow as tf
>>> import numpy as np
>>> from transformers import AutoTokenizer, TFXLNetLMHeadModel
>>> tokenizer = AutoTokenizer.from_pretrained("xlnet-large-cased")
>>> model = TFXLNetLMHeadModel.from_pretrained("xlnet-large-cased")
>>> # We show how to setup inputs to predict a next token using a bi-directional context.
>>> input_ids = tf.constant(tokenizer.encode("Hello, my dog is very <mask>", add_special_tokens=True))[
... None, :
... ] # We will predict the masked token
>>> perm_mask = np.zeros((1, input_ids.shape[1], input_ids.shape[1]))
>>> perm_mask[:, :, -1] = 1.0 # Previous tokens don't see last token
>>> target_mapping = np.zeros(
... (1, 1, input_ids.shape[1])
... ) # Shape [1, 1, seq_length] => let's predict one token
>>> target_mapping[
... 0, 0, -1
... ] = 1.0 # Our first (and only) prediction will be the last token of the sequence (the masked token)
>>> outputs = model(
... input_ids,
... perm_mask=tf.constant(perm_mask, dtype=tf.float32),
... target_mapping=tf.constant(target_mapping, dtype=tf.float32),
... )
>>> next_token_logits = outputs[
... 0
... ] # Output has shape [target_mapping.size(0), target_mapping.size(1), config.vocab_size]
```"""
transformer_outputs = self.transformer(
input_ids=input_ids,
attention_mask=attention_mask,
mems=mems,
perm_mask=perm_mask,
target_mapping=target_mapping,
token_type_ids=token_type_ids,
input_mask=input_mask,
head_mask=head_mask,
inputs_embeds=inputs_embeds,
use_mems=use_mems,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
training=training,
)
hidden_state = transformer_outputs[0]
logits = self.lm_loss(hidden_state, training=training)
loss = None
if labels is not None:
loss = self.hf_compute_loss(labels, logits)
if not return_dict:
output = (logits,) + transformer_outputs[1:]
return ((loss,) + output) if loss is not None else output
return TFXLNetLMHeadModelOutput(
loss=loss,
logits=logits,
mems=transformer_outputs.mems,
hidden_states=transformer_outputs.hidden_states,
attentions=transformer_outputs.attentions,
)
@add_start_docstrings(
"""
XLNet Model with a sequence classification/regression head on top (a linear layer on top of the pooled output) e.g.
for GLUE tasks.
""",
XLNET_START_DOCSTRING,
)
class TFXLNetForSequenceClassification(TFXLNetPreTrainedModel, TFSequenceClassificationLoss):
def __init__(self, config, *inputs, **kwargs):
super().__init__(config, *inputs, **kwargs)
self.num_labels = config.num_labels
self.transformer = TFXLNetMainLayer(config, name="transformer")
self.sequence_summary = TFSequenceSummary(
config, initializer_range=config.initializer_range, name="sequence_summary"
)
self.logits_proj = tf.keras.layers.Dense(
config.num_labels, kernel_initializer=get_initializer(config.initializer_range), name="logits_proj"
)
@unpack_inputs
@add_start_docstrings_to_model_forward(XLNET_INPUTS_DOCSTRING.format("batch_size, sequence_length"))
@add_code_sample_docstrings(
checkpoint=_CHECKPOINT_FOR_DOC,
output_type=TFXLNetForSequenceClassificationOutput,
config_class=_CONFIG_FOR_DOC,
)
def call(
self,
input_ids: TFModelInputType | None = None,
attention_mask: np.ndarray | tf.Tensor | None = None,
mems: np.ndarray | tf.Tensor | None = None,
perm_mask: np.ndarray | tf.Tensor | None = None,
target_mapping: np.ndarray | tf.Tensor | None = None,
token_type_ids: np.ndarray | tf.Tensor | None = None,
input_mask: np.ndarray | tf.Tensor | None = None,
head_mask: np.ndarray | tf.Tensor | None = None,
inputs_embeds: np.ndarray | tf.Tensor | None = None,
use_mems: Optional[bool] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
labels: np.ndarray | tf.Tensor | None = None,
training: bool = False,
) -> Union[TFXLNetForSequenceClassificationOutput, Tuple[tf.Tensor]]:
r"""
labels (`tf.Tensor` of shape `(batch_size,)`, *optional*):
Labels for computing the sequence classification/regression loss. Indices should be in `[0, ...,
config.num_labels - 1]`. If `config.num_labels == 1` a regression loss is computed (Mean-Square loss), If
`config.num_labels > 1` a classification loss is computed (Cross-Entropy).
"""
transformer_outputs = self.transformer(
input_ids=input_ids,
attention_mask=attention_mask,
mems=mems,
perm_mask=perm_mask,
target_mapping=target_mapping,
token_type_ids=token_type_ids,
input_mask=input_mask,
head_mask=head_mask,
inputs_embeds=inputs_embeds,
use_mems=use_mems,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
training=training,
)
output = transformer_outputs[0]
output = self.sequence_summary(output)
logits = self.logits_proj(output)
loss = None if labels is None else self.hf_compute_loss(labels, logits)
if not return_dict:
output = (logits,) + transformer_outputs[1:]
return ((loss,) + output) if loss is not None else output
return TFXLNetForSequenceClassificationOutput(
loss=loss,
logits=logits,
mems=transformer_outputs.mems,
hidden_states=transformer_outputs.hidden_states,
attentions=transformer_outputs.attentions,
)
@add_start_docstrings(
"""
XLNET Model with a multiple choice classification head on top (a linear layer on top of the pooled output and a
softmax) e.g. for RocStories/SWAG tasks.
""",
XLNET_START_DOCSTRING,
)
class TFXLNetForMultipleChoice(TFXLNetPreTrainedModel, TFMultipleChoiceLoss):
def __init__(self, config, *inputs, **kwargs):
super().__init__(config, *inputs, **kwargs)
self.transformer = TFXLNetMainLayer(config, name="transformer")
self.sequence_summary = TFSequenceSummary(
config, initializer_range=config.initializer_range, name="sequence_summary"
)
self.logits_proj = tf.keras.layers.Dense(
1, kernel_initializer=get_initializer(config.initializer_range), name="logits_proj"
)
@unpack_inputs
@add_start_docstrings_to_model_forward(XLNET_INPUTS_DOCSTRING.format("batch_size, num_choices, sequence_length"))
@add_code_sample_docstrings(
checkpoint=_CHECKPOINT_FOR_DOC,
output_type=TFXLNetForMultipleChoiceOutput,
config_class=_CONFIG_FOR_DOC,
)
def call(
self,
input_ids: TFModelInputType | None = None,
token_type_ids: np.ndarray | tf.Tensor | None = None,
input_mask: np.ndarray | tf.Tensor | None = None,
attention_mask: np.ndarray | tf.Tensor | None = None,
mems: np.ndarray | tf.Tensor | None = None,
perm_mask: np.ndarray | tf.Tensor | None = None,
target_mapping: np.ndarray | tf.Tensor | None = None,
head_mask: np.ndarray | tf.Tensor | None = None,
inputs_embeds: np.ndarray | tf.Tensor | None = None,
use_mems: Optional[bool] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
labels: np.ndarray | tf.Tensor | None = None,
training: bool = False,
) -> Union[TFXLNetForMultipleChoiceOutput, Tuple[tf.Tensor]]:
r"""
labels (`tf.Tensor` of shape `(batch_size,)`, *optional*):
Labels for computing the multiple choice classification loss. Indices should be in `[0, ..., num_choices]`
where `num_choices` is the size of the second dimension of the input tensors. (See `input_ids` above)
"""
if input_ids is not None:
num_choices = shape_list(input_ids)[1]
seq_length = shape_list(input_ids)[2]
else:
num_choices = shape_list(inputs_embeds)[1]
seq_length = shape_list(inputs_embeds)[2]
flat_input_ids = tf.reshape(input_ids, (-1, seq_length)) if input_ids is not None else None
flat_attention_mask = tf.reshape(attention_mask, (-1, seq_length)) if attention_mask is not None else None
flat_token_type_ids = tf.reshape(token_type_ids, (-1, seq_length)) if token_type_ids is not None else None
flat_input_mask = tf.reshape(input_mask, (-1, seq_length)) if input_mask is not None else None
flat_inputs_embeds = (
tf.reshape(inputs_embeds, (-1, seq_length, shape_list(inputs_embeds)[3]))
if inputs_embeds is not None
else None
)
transformer_outputs = self.transformer(
flat_input_ids,
flat_attention_mask,
mems,
perm_mask,
target_mapping,
flat_token_type_ids,
flat_input_mask,
head_mask,
flat_inputs_embeds,
use_mems,
output_attentions,
output_hidden_states,
return_dict=return_dict,
training=training,
)
output = transformer_outputs[0]
logits = self.sequence_summary(output)
logits = self.logits_proj(logits)
reshaped_logits = tf.reshape(logits, (-1, num_choices))
loss = None if labels is None else self.hf_compute_loss(labels, reshaped_logits)
if not return_dict:
output = (reshaped_logits,) + transformer_outputs[1:]
return ((loss,) + output) if loss is not None else output
return TFXLNetForMultipleChoiceOutput(
loss=loss,
logits=reshaped_logits,
mems=transformer_outputs.mems,
hidden_states=transformer_outputs.hidden_states,
attentions=transformer_outputs.attentions,
)
@add_start_docstrings(
"""
XLNet Model with a token classification head on top (a linear layer on top of the hidden-states output) e.g. for
Named-Entity-Recognition (NER) tasks.
""",
XLNET_START_DOCSTRING,
)
class TFXLNetForTokenClassification(TFXLNetPreTrainedModel, TFTokenClassificationLoss):
def __init__(self, config, *inputs, **kwargs):
super().__init__(config, *inputs, **kwargs)
self.num_labels = config.num_labels
self.transformer = TFXLNetMainLayer(config, name="transformer")
self.classifier = tf.keras.layers.Dense(
config.num_labels, kernel_initializer=get_initializer(config.initializer_range), name="classifier"
)
@unpack_inputs
@add_start_docstrings_to_model_forward(XLNET_INPUTS_DOCSTRING.format("batch_size, sequence_length"))
@add_code_sample_docstrings(
checkpoint=_CHECKPOINT_FOR_DOC,
output_type=TFXLNetForTokenClassificationOutput,
config_class=_CONFIG_FOR_DOC,
)
def call(
self,
input_ids: TFModelInputType | None = None,
attention_mask: np.ndarray | tf.Tensor | None = None,
mems: np.ndarray | tf.Tensor | None = None,
perm_mask: np.ndarray | tf.Tensor | None = None,
target_mapping: np.ndarray | tf.Tensor | None = None,
token_type_ids: np.ndarray | tf.Tensor | None = None,
input_mask: np.ndarray | tf.Tensor | None = None,
head_mask: np.ndarray | tf.Tensor | None = None,
inputs_embeds: np.ndarray | tf.Tensor | None = None,
use_mems: Optional[bool] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
labels: np.ndarray | tf.Tensor | None = None,
training: bool = False,
) -> Union[TFXLNetForTokenClassificationOutput, Tuple[tf.Tensor]]:
r"""
labels (`tf.Tensor` of shape `(batch_size, sequence_length)`, *optional*):
Labels for computing the token classification loss. Indices should be in `[0, ..., config.num_labels - 1]`.
"""
transformer_outputs = self.transformer(
input_ids=input_ids,
attention_mask=attention_mask,
mems=mems,
perm_mask=perm_mask,
target_mapping=target_mapping,
token_type_ids=token_type_ids,
input_mask=input_mask,
head_mask=head_mask,
inputs_embeds=inputs_embeds,
use_mems=use_mems,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
training=training,
)
output = transformer_outputs[0]
logits = self.classifier(output)
loss = None if labels is None else self.hf_compute_loss(labels, logits)
if not return_dict:
output = (logits,) + transformer_outputs[1:]
return ((loss,) + output) if loss is not None else output
return TFXLNetForTokenClassificationOutput(
loss=loss,
logits=logits,
mems=transformer_outputs.mems,
hidden_states=transformer_outputs.hidden_states,
attentions=transformer_outputs.attentions,
)
@add_start_docstrings(
"""
XLNet Model with a span classification head on top for extractive question-answering tasks like SQuAD (a linear
layers on top of the hidden-states output to compute `span start logits` and `span end logits`).
""",
XLNET_START_DOCSTRING,
)
class TFXLNetForQuestionAnsweringSimple(TFXLNetPreTrainedModel, TFQuestionAnsweringLoss):
def __init__(self, config, *inputs, **kwargs):
super().__init__(config, *inputs, **kwargs)
self.transformer = TFXLNetMainLayer(config, name="transformer")
self.qa_outputs = tf.keras.layers.Dense(
config.num_labels, kernel_initializer=get_initializer(config.initializer_range), name="qa_outputs"
)
@unpack_inputs
@add_start_docstrings_to_model_forward(XLNET_INPUTS_DOCSTRING.format("batch_size, sequence_length"))
@add_code_sample_docstrings(
checkpoint=_CHECKPOINT_FOR_DOC,
output_type=TFXLNetForQuestionAnsweringSimpleOutput,
config_class=_CONFIG_FOR_DOC,
)
def call(
self,
input_ids: TFModelInputType | None = None,
attention_mask: np.ndarray | tf.Tensor | None = None,
mems: np.ndarray | tf.Tensor | None = None,
perm_mask: np.ndarray | tf.Tensor | None = None,
target_mapping: np.ndarray | tf.Tensor | None = None,
token_type_ids: np.ndarray | tf.Tensor | None = None,
input_mask: np.ndarray | tf.Tensor | None = None,
head_mask: np.ndarray | tf.Tensor | None = None,
inputs_embeds: np.ndarray | tf.Tensor | None = None,
use_mems: Optional[bool] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
start_positions: np.ndarray | tf.Tensor | None = None,
end_positions: np.ndarray | tf.Tensor | None = None,
training: bool = False,
) -> Union[TFXLNetForQuestionAnsweringSimpleOutput, Tuple[tf.Tensor]]:
r"""
start_positions (`tf.Tensor` of shape `(batch_size,)`, *optional*):
Labels for position (index) of the start of the labelled span for computing the token classification loss.
Positions are clamped to the length of the sequence (`sequence_length`). Position outside of the sequence
are not taken into account for computing the loss.
end_positions (`tf.Tensor` of shape `(batch_size,)`, *optional*):
Labels for position (index) of the end of the labelled span for computing the token classification loss.
Positions are clamped to the length of the sequence (`sequence_length`). Position outside of the sequence
are not taken into account for computing the loss.
"""
transformer_outputs = self.transformer(
input_ids=input_ids,
attention_mask=attention_mask,
mems=mems,
perm_mask=perm_mask,
target_mapping=target_mapping,
token_type_ids=token_type_ids,
input_mask=input_mask,
head_mask=head_mask,
inputs_embeds=inputs_embeds,
use_mems=use_mems,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
training=training,
)
sequence_output = transformer_outputs[0]
logits = self.qa_outputs(sequence_output)
start_logits, end_logits = tf.split(logits, 2, axis=-1)
start_logits = tf.squeeze(start_logits, axis=-1)
end_logits = tf.squeeze(end_logits, axis=-1)
loss = None
if start_positions is not None and end_positions is not None:
labels = {"start_position": start_positions}
labels["end_position"] = end_positions
loss = self.hf_compute_loss(labels, (start_logits, end_logits))
if not return_dict:
output = (start_logits, end_logits) + transformer_outputs[1:]
return ((loss,) + output) if loss is not None else output
return TFXLNetForQuestionAnsweringSimpleOutput(
loss=loss,
start_logits=start_logits,
end_logits=end_logits,
mems=transformer_outputs.mems,
hidden_states=transformer_outputs.hidden_states,
attentions=transformer_outputs.attentions,
)
| 73,071 | 41.983529 | 151 | py |
transformers | transformers-main/src/transformers/models/xlnet/__init__.py | # Copyright 2020 The HuggingFace Team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
from typing import TYPE_CHECKING
from ...utils import (
OptionalDependencyNotAvailable,
_LazyModule,
is_sentencepiece_available,
is_tf_available,
is_tokenizers_available,
is_torch_available,
)
_import_structure = {"configuration_xlnet": ["XLNET_PRETRAINED_CONFIG_ARCHIVE_MAP", "XLNetConfig"]}
try:
if not is_sentencepiece_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
_import_structure["tokenization_xlnet"] = ["XLNetTokenizer"]
try:
if not is_tokenizers_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
_import_structure["tokenization_xlnet_fast"] = ["XLNetTokenizerFast"]
try:
if not is_torch_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
_import_structure["modeling_xlnet"] = [
"XLNET_PRETRAINED_MODEL_ARCHIVE_LIST",
"XLNetForMultipleChoice",
"XLNetForQuestionAnswering",
"XLNetForQuestionAnsweringSimple",
"XLNetForSequenceClassification",
"XLNetForTokenClassification",
"XLNetLMHeadModel",
"XLNetModel",
"XLNetPreTrainedModel",
"load_tf_weights_in_xlnet",
]
try:
if not is_tf_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
_import_structure["modeling_tf_xlnet"] = [
"TF_XLNET_PRETRAINED_MODEL_ARCHIVE_LIST",
"TFXLNetForMultipleChoice",
"TFXLNetForQuestionAnsweringSimple",
"TFXLNetForSequenceClassification",
"TFXLNetForTokenClassification",
"TFXLNetLMHeadModel",
"TFXLNetMainLayer",
"TFXLNetModel",
"TFXLNetPreTrainedModel",
]
if TYPE_CHECKING:
from .configuration_xlnet import XLNET_PRETRAINED_CONFIG_ARCHIVE_MAP, XLNetConfig
try:
if not is_sentencepiece_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
from .tokenization_xlnet import XLNetTokenizer
try:
if not is_tokenizers_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
from .tokenization_xlnet_fast import XLNetTokenizerFast
try:
if not is_torch_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
from .modeling_xlnet import (
XLNET_PRETRAINED_MODEL_ARCHIVE_LIST,
XLNetForMultipleChoice,
XLNetForQuestionAnswering,
XLNetForQuestionAnsweringSimple,
XLNetForSequenceClassification,
XLNetForTokenClassification,
XLNetLMHeadModel,
XLNetModel,
XLNetPreTrainedModel,
load_tf_weights_in_xlnet,
)
try:
if not is_tf_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
from .modeling_tf_xlnet import (
TF_XLNET_PRETRAINED_MODEL_ARCHIVE_LIST,
TFXLNetForMultipleChoice,
TFXLNetForQuestionAnsweringSimple,
TFXLNetForSequenceClassification,
TFXLNetForTokenClassification,
TFXLNetLMHeadModel,
TFXLNetMainLayer,
TFXLNetModel,
TFXLNetPreTrainedModel,
)
else:
import sys
sys.modules[__name__] = _LazyModule(__name__, globals()["__file__"], _import_structure, module_spec=__spec__)
| 4,288 | 28.993007 | 113 | py |
transformers | transformers-main/src/transformers/models/xlnet/convert_xlnet_original_tf_checkpoint_to_pytorch.py | # coding=utf-8
# Copyright 2018 The HuggingFace Inc. team.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
"""Convert BERT checkpoint."""
import argparse
import os
import torch
from transformers import (
XLNetConfig,
XLNetForQuestionAnswering,
XLNetForSequenceClassification,
XLNetLMHeadModel,
load_tf_weights_in_xlnet,
)
from transformers.utils import CONFIG_NAME, WEIGHTS_NAME, logging
GLUE_TASKS_NUM_LABELS = {
"cola": 2,
"mnli": 3,
"mrpc": 2,
"sst-2": 2,
"sts-b": 1,
"qqp": 2,
"qnli": 2,
"rte": 2,
"wnli": 2,
}
logging.set_verbosity_info()
def convert_xlnet_checkpoint_to_pytorch(
tf_checkpoint_path, bert_config_file, pytorch_dump_folder_path, finetuning_task=None
):
# Initialise PyTorch model
config = XLNetConfig.from_json_file(bert_config_file)
finetuning_task = finetuning_task.lower() if finetuning_task is not None else ""
if finetuning_task in GLUE_TASKS_NUM_LABELS:
print(f"Building PyTorch XLNetForSequenceClassification model from configuration: {config}")
config.finetuning_task = finetuning_task
config.num_labels = GLUE_TASKS_NUM_LABELS[finetuning_task]
model = XLNetForSequenceClassification(config)
elif "squad" in finetuning_task:
config.finetuning_task = finetuning_task
model = XLNetForQuestionAnswering(config)
else:
model = XLNetLMHeadModel(config)
# Load weights from tf checkpoint
load_tf_weights_in_xlnet(model, config, tf_checkpoint_path)
# Save pytorch-model
pytorch_weights_dump_path = os.path.join(pytorch_dump_folder_path, WEIGHTS_NAME)
pytorch_config_dump_path = os.path.join(pytorch_dump_folder_path, CONFIG_NAME)
print(f"Save PyTorch model to {os.path.abspath(pytorch_weights_dump_path)}")
torch.save(model.state_dict(), pytorch_weights_dump_path)
print(f"Save configuration file to {os.path.abspath(pytorch_config_dump_path)}")
with open(pytorch_config_dump_path, "w", encoding="utf-8") as f:
f.write(config.to_json_string())
if __name__ == "__main__":
parser = argparse.ArgumentParser()
# Required parameters
parser.add_argument(
"--tf_checkpoint_path", default=None, type=str, required=True, help="Path to the TensorFlow checkpoint path."
)
parser.add_argument(
"--xlnet_config_file",
default=None,
type=str,
required=True,
help=(
"The config json file corresponding to the pre-trained XLNet model. \n"
"This specifies the model architecture."
),
)
parser.add_argument(
"--pytorch_dump_folder_path",
default=None,
type=str,
required=True,
help="Path to the folder to store the PyTorch model or dataset/vocab.",
)
parser.add_argument(
"--finetuning_task",
default=None,
type=str,
help="Name of a task on which the XLNet TensorFlow model was fine-tuned",
)
args = parser.parse_args()
print(args)
convert_xlnet_checkpoint_to_pytorch(
args.tf_checkpoint_path, args.xlnet_config_file, args.pytorch_dump_folder_path, args.finetuning_task
)
| 3,688 | 31.078261 | 117 | py |
transformers | transformers-main/src/transformers/models/xlnet/modeling_xlnet.py | # coding=utf-8
# Copyright 2018 Google AI, Google Brain and Carnegie Mellon University Authors and the HuggingFace Inc. team.
# Copyright (c) 2018, NVIDIA CORPORATION. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
"""
PyTorch XLNet model.
"""
import warnings
from dataclasses import dataclass
from typing import List, Optional, Tuple, Union
import torch
from torch import nn
from torch.nn import BCEWithLogitsLoss, CrossEntropyLoss, MSELoss
from ...activations import ACT2FN
from ...modeling_utils import PoolerAnswerClass, PoolerEndLogits, PoolerStartLogits, PreTrainedModel, SequenceSummary
from ...pytorch_utils import apply_chunking_to_forward
from ...utils import (
ModelOutput,
add_code_sample_docstrings,
add_start_docstrings,
add_start_docstrings_to_model_forward,
logging,
replace_return_docstrings,
)
from .configuration_xlnet import XLNetConfig
logger = logging.get_logger(__name__)
_CHECKPOINT_FOR_DOC = "xlnet-base-cased"
_CONFIG_FOR_DOC = "XLNetConfig"
XLNET_PRETRAINED_MODEL_ARCHIVE_LIST = [
"xlnet-base-cased",
"xlnet-large-cased",
# See all XLNet models at https://huggingface.co/models?filter=xlnet
]
def build_tf_xlnet_to_pytorch_map(model, config, tf_weights=None):
"""
A map of modules from TF to PyTorch. I use a map to keep the PyTorch model as identical to the original PyTorch
model as possible.
"""
tf_to_pt_map = {}
if hasattr(model, "transformer"):
if hasattr(model, "lm_loss"):
# We will load also the output bias
tf_to_pt_map["model/lm_loss/bias"] = model.lm_loss.bias
if hasattr(model, "sequence_summary") and "model/sequnece_summary/summary/kernel" in tf_weights:
# We will load also the sequence summary
tf_to_pt_map["model/sequnece_summary/summary/kernel"] = model.sequence_summary.summary.weight
tf_to_pt_map["model/sequnece_summary/summary/bias"] = model.sequence_summary.summary.bias
if (
hasattr(model, "logits_proj")
and config.finetuning_task is not None
and f"model/regression_{config.finetuning_task}/logit/kernel" in tf_weights
):
tf_to_pt_map[f"model/regression_{config.finetuning_task}/logit/kernel"] = model.logits_proj.weight
tf_to_pt_map[f"model/regression_{config.finetuning_task}/logit/bias"] = model.logits_proj.bias
# Now load the rest of the transformer
model = model.transformer
# Embeddings and output
tf_to_pt_map.update(
{
"model/transformer/word_embedding/lookup_table": model.word_embedding.weight,
"model/transformer/mask_emb/mask_emb": model.mask_emb,
}
)
# Transformer blocks
for i, b in enumerate(model.layer):
layer_str = f"model/transformer/layer_{i}/"
tf_to_pt_map.update(
{
layer_str + "rel_attn/LayerNorm/gamma": b.rel_attn.layer_norm.weight,
layer_str + "rel_attn/LayerNorm/beta": b.rel_attn.layer_norm.bias,
layer_str + "rel_attn/o/kernel": b.rel_attn.o,
layer_str + "rel_attn/q/kernel": b.rel_attn.q,
layer_str + "rel_attn/k/kernel": b.rel_attn.k,
layer_str + "rel_attn/r/kernel": b.rel_attn.r,
layer_str + "rel_attn/v/kernel": b.rel_attn.v,
layer_str + "ff/LayerNorm/gamma": b.ff.layer_norm.weight,
layer_str + "ff/LayerNorm/beta": b.ff.layer_norm.bias,
layer_str + "ff/layer_1/kernel": b.ff.layer_1.weight,
layer_str + "ff/layer_1/bias": b.ff.layer_1.bias,
layer_str + "ff/layer_2/kernel": b.ff.layer_2.weight,
layer_str + "ff/layer_2/bias": b.ff.layer_2.bias,
}
)
# Relative positioning biases
if config.untie_r:
r_r_list = []
r_w_list = []
r_s_list = []
seg_embed_list = []
for b in model.layer:
r_r_list.append(b.rel_attn.r_r_bias)
r_w_list.append(b.rel_attn.r_w_bias)
r_s_list.append(b.rel_attn.r_s_bias)
seg_embed_list.append(b.rel_attn.seg_embed)
else:
r_r_list = [model.r_r_bias]
r_w_list = [model.r_w_bias]
r_s_list = [model.r_s_bias]
seg_embed_list = [model.seg_embed]
tf_to_pt_map.update(
{
"model/transformer/r_r_bias": r_r_list,
"model/transformer/r_w_bias": r_w_list,
"model/transformer/r_s_bias": r_s_list,
"model/transformer/seg_embed": seg_embed_list,
}
)
return tf_to_pt_map
def load_tf_weights_in_xlnet(model, config, tf_path):
"""Load tf checkpoints in a pytorch model"""
try:
import numpy as np
import tensorflow as tf
except ImportError:
logger.error(
"Loading a TensorFlow models in PyTorch, requires TensorFlow to be installed. Please see "
"https://www.tensorflow.org/install/ for installation instructions."
)
raise
# Load weights from TF model
init_vars = tf.train.list_variables(tf_path)
tf_weights = {}
for name, shape in init_vars:
logger.info(f"Loading TF weight {name} with shape {shape}")
array = tf.train.load_variable(tf_path, name)
tf_weights[name] = array
# Build TF to PyTorch weights loading map
tf_to_pt_map = build_tf_xlnet_to_pytorch_map(model, config, tf_weights)
for name, pointer in tf_to_pt_map.items():
logger.info(f"Importing {name}")
if name not in tf_weights:
logger.info(f"{name} not in tf pre-trained weights, skipping")
continue
array = tf_weights[name]
# adam_v and adam_m are variables used in AdamWeightDecayOptimizer to calculated m and v
# which are not required for using pretrained model
if "kernel" in name and ("ff" in name or "summary" in name or "logit" in name):
logger.info("Transposing")
array = np.transpose(array)
if isinstance(pointer, list):
# Here we will split the TF weights
assert (
len(pointer) == array.shape[0]
), f"Pointer length {len(pointer)} and array length {array.shape[0]} mismatched"
for i, p_i in enumerate(pointer):
arr_i = array[i, ...]
try:
assert (
p_i.shape == arr_i.shape
), f"Pointer shape {p_i.shape} and array shape {arr_i.shape} mismatched"
except AssertionError as e:
e.args += (p_i.shape, arr_i.shape)
raise
logger.info(f"Initialize PyTorch weight {name} for layer {i}")
p_i.data = torch.from_numpy(arr_i)
else:
try:
assert (
pointer.shape == array.shape
), f"Pointer shape {pointer.shape} and array shape {array.shape} mismatched"
except AssertionError as e:
e.args += (pointer.shape, array.shape)
raise
logger.info(f"Initialize PyTorch weight {name}")
pointer.data = torch.from_numpy(array)
tf_weights.pop(name, None)
tf_weights.pop(name + "/Adam", None)
tf_weights.pop(name + "/Adam_1", None)
logger.info(f"Weights not copied to PyTorch model: {', '.join(tf_weights.keys())}")
return model
class XLNetRelativeAttention(nn.Module):
def __init__(self, config):
super().__init__()
if config.d_model % config.n_head != 0:
raise ValueError(
f"The hidden size ({config.d_model}) is not a multiple of the number of attention "
f"heads ({config.n_head}"
)
self.n_head = config.n_head
self.d_head = config.d_head
self.d_model = config.d_model
self.scale = 1 / (config.d_head**0.5)
self.q = nn.Parameter(torch.FloatTensor(config.d_model, self.n_head, self.d_head))
self.k = nn.Parameter(torch.FloatTensor(config.d_model, self.n_head, self.d_head))
self.v = nn.Parameter(torch.FloatTensor(config.d_model, self.n_head, self.d_head))
self.o = nn.Parameter(torch.FloatTensor(config.d_model, self.n_head, self.d_head))
self.r = nn.Parameter(torch.FloatTensor(config.d_model, self.n_head, self.d_head))
self.r_r_bias = nn.Parameter(torch.FloatTensor(self.n_head, self.d_head))
self.r_s_bias = nn.Parameter(torch.FloatTensor(self.n_head, self.d_head))
self.r_w_bias = nn.Parameter(torch.FloatTensor(self.n_head, self.d_head))
self.seg_embed = nn.Parameter(torch.FloatTensor(2, self.n_head, self.d_head))
self.layer_norm = nn.LayerNorm(config.d_model, eps=config.layer_norm_eps)
self.dropout = nn.Dropout(config.dropout)
def prune_heads(self, heads):
raise NotImplementedError
@staticmethod
def rel_shift(x, klen=-1):
"""perform relative shift to form the relative attention score."""
x_size = x.shape
x = x.reshape(x_size[1], x_size[0], x_size[2], x_size[3])
x = x[1:, ...]
x = x.reshape(x_size[0], x_size[1] - 1, x_size[2], x_size[3])
# x = x[:, 0:klen, :, :]
x = torch.index_select(x, 1, torch.arange(klen, device=x.device, dtype=torch.long))
return x
@staticmethod
def rel_shift_bnij(x, klen=-1):
x_size = x.shape
x = x.reshape(x_size[0], x_size[1], x_size[3], x_size[2])
x = x[:, :, 1:, :]
x = x.reshape(x_size[0], x_size[1], x_size[2], x_size[3] - 1)
# Note: the tensor-slice form was faster in my testing than torch.index_select
# However, tracing doesn't like the nature of the slice, and if klen changes
# during the run then it'll fail, whereas index_select will be fine.
x = torch.index_select(x, 3, torch.arange(klen, device=x.device, dtype=torch.long))
# x = x[:, :, :, :klen]
return x
def rel_attn_core(
self,
q_head,
k_head_h,
v_head_h,
k_head_r,
seg_mat=None,
attn_mask=None,
head_mask=None,
output_attentions=False,
):
"""Core relative positional attention operations."""
# content based attention score
ac = torch.einsum("ibnd,jbnd->bnij", q_head + self.r_w_bias, k_head_h)
# position based attention score
bd = torch.einsum("ibnd,jbnd->bnij", q_head + self.r_r_bias, k_head_r)
bd = self.rel_shift_bnij(bd, klen=ac.shape[3])
# segment based attention score
if seg_mat is None:
ef = 0
else:
ef = torch.einsum("ibnd,snd->ibns", q_head + self.r_s_bias, self.seg_embed)
ef = torch.einsum("ijbs,ibns->bnij", seg_mat, ef)
# merge attention scores and perform masking
attn_score = (ac + bd + ef) * self.scale
if attn_mask is not None:
# attn_score = attn_score * (1 - attn_mask) - 1e30 * attn_mask
if attn_mask.dtype == torch.float16:
attn_score = attn_score - 65500 * torch.einsum("ijbn->bnij", attn_mask)
else:
attn_score = attn_score - 1e30 * torch.einsum("ijbn->bnij", attn_mask)
# attention probability
attn_prob = nn.functional.softmax(attn_score, dim=3)
attn_prob = self.dropout(attn_prob)
# Mask heads if we want to
if head_mask is not None:
attn_prob = attn_prob * torch.einsum("ijbn->bnij", head_mask)
# attention output
attn_vec = torch.einsum("bnij,jbnd->ibnd", attn_prob, v_head_h)
if output_attentions:
return attn_vec, torch.einsum("bnij->ijbn", attn_prob)
return attn_vec
def post_attention(self, h, attn_vec, residual=True):
"""Post-attention processing."""
# post-attention projection (back to `d_model`)
attn_out = torch.einsum("ibnd,hnd->ibh", attn_vec, self.o)
attn_out = self.dropout(attn_out)
if residual:
attn_out = attn_out + h
output = self.layer_norm(attn_out)
return output
def forward(
self,
h,
g,
attn_mask_h,
attn_mask_g,
r,
seg_mat,
mems=None,
target_mapping=None,
head_mask=None,
output_attentions=False,
):
if g is not None:
# Two-stream attention with relative positional encoding.
# content based attention score
if mems is not None and mems.dim() > 1:
cat = torch.cat([mems, h], dim=0)
else:
cat = h
# content-based key head
k_head_h = torch.einsum("ibh,hnd->ibnd", cat, self.k)
# content-based value head
v_head_h = torch.einsum("ibh,hnd->ibnd", cat, self.v)
# position-based key head
k_head_r = torch.einsum("ibh,hnd->ibnd", r, self.r)
# h-stream
# content-stream query head
q_head_h = torch.einsum("ibh,hnd->ibnd", h, self.q)
# core attention ops
attn_vec_h = self.rel_attn_core(
q_head_h,
k_head_h,
v_head_h,
k_head_r,
seg_mat=seg_mat,
attn_mask=attn_mask_h,
head_mask=head_mask,
output_attentions=output_attentions,
)
if output_attentions:
attn_vec_h, attn_prob_h = attn_vec_h
# post processing
output_h = self.post_attention(h, attn_vec_h)
# g-stream
# query-stream query head
q_head_g = torch.einsum("ibh,hnd->ibnd", g, self.q)
# core attention ops
if target_mapping is not None:
q_head_g = torch.einsum("mbnd,mlb->lbnd", q_head_g, target_mapping)
attn_vec_g = self.rel_attn_core(
q_head_g,
k_head_h,
v_head_h,
k_head_r,
seg_mat=seg_mat,
attn_mask=attn_mask_g,
head_mask=head_mask,
output_attentions=output_attentions,
)
if output_attentions:
attn_vec_g, attn_prob_g = attn_vec_g
attn_vec_g = torch.einsum("lbnd,mlb->mbnd", attn_vec_g, target_mapping)
else:
attn_vec_g = self.rel_attn_core(
q_head_g,
k_head_h,
v_head_h,
k_head_r,
seg_mat=seg_mat,
attn_mask=attn_mask_g,
head_mask=head_mask,
output_attentions=output_attentions,
)
if output_attentions:
attn_vec_g, attn_prob_g = attn_vec_g
# post processing
output_g = self.post_attention(g, attn_vec_g)
if output_attentions:
attn_prob = attn_prob_h, attn_prob_g
else:
# Multi-head attention with relative positional encoding
if mems is not None and mems.dim() > 1:
cat = torch.cat([mems, h], dim=0)
else:
cat = h
# content heads
q_head_h = torch.einsum("ibh,hnd->ibnd", h, self.q)
k_head_h = torch.einsum("ibh,hnd->ibnd", cat, self.k)
v_head_h = torch.einsum("ibh,hnd->ibnd", cat, self.v)
# positional heads
# type casting for fp16 support
k_head_r = torch.einsum("ibh,hnd->ibnd", r.type(self.r.dtype), self.r)
# core attention ops
attn_vec = self.rel_attn_core(
q_head_h,
k_head_h,
v_head_h,
k_head_r,
seg_mat=seg_mat,
attn_mask=attn_mask_h,
head_mask=head_mask,
output_attentions=output_attentions,
)
if output_attentions:
attn_vec, attn_prob = attn_vec
# post processing
output_h = self.post_attention(h, attn_vec)
output_g = None
outputs = (output_h, output_g)
if output_attentions:
outputs = outputs + (attn_prob,)
return outputs
class XLNetFeedForward(nn.Module):
def __init__(self, config):
super().__init__()
self.layer_norm = nn.LayerNorm(config.d_model, eps=config.layer_norm_eps)
self.layer_1 = nn.Linear(config.d_model, config.d_inner)
self.layer_2 = nn.Linear(config.d_inner, config.d_model)
self.dropout = nn.Dropout(config.dropout)
if isinstance(config.ff_activation, str):
self.activation_function = ACT2FN[config.ff_activation]
else:
self.activation_function = config.ff_activation
def forward(self, inp):
output = inp
output = self.layer_1(output)
output = self.activation_function(output)
output = self.dropout(output)
output = self.layer_2(output)
output = self.dropout(output)
output = self.layer_norm(output + inp)
return output
class XLNetLayer(nn.Module):
def __init__(self, config):
super().__init__()
self.rel_attn = XLNetRelativeAttention(config)
self.ff = XLNetFeedForward(config)
self.dropout = nn.Dropout(config.dropout)
self.chunk_size_feed_forward = config.chunk_size_feed_forward
self.seq_len_dim = 1
def forward(
self,
output_h,
output_g,
attn_mask_h,
attn_mask_g,
r,
seg_mat,
mems=None,
target_mapping=None,
head_mask=None,
output_attentions=False,
):
outputs = self.rel_attn(
output_h,
output_g,
attn_mask_h,
attn_mask_g,
r,
seg_mat,
mems=mems,
target_mapping=target_mapping,
head_mask=head_mask,
output_attentions=output_attentions,
)
output_h, output_g = outputs[:2]
if output_g is not None:
output_g = apply_chunking_to_forward(
self.ff_chunk, self.chunk_size_feed_forward, self.seq_len_dim, output_g
)
output_h = apply_chunking_to_forward(self.ff_chunk, self.chunk_size_feed_forward, self.seq_len_dim, output_h)
outputs = (output_h, output_g) + outputs[2:] # Add again attentions if there are there
return outputs
def ff_chunk(self, output_x):
output_x = self.ff(output_x)
return output_x
class XLNetPreTrainedModel(PreTrainedModel):
"""
An abstract class to handle weights initialization and a simple interface for downloading and loading pretrained
models.
"""
config_class = XLNetConfig
load_tf_weights = load_tf_weights_in_xlnet
base_model_prefix = "transformer"
def _init_weights(self, module):
"""Initialize the weights."""
if isinstance(module, nn.Linear):
# Slightly different from the TF version which uses truncated_normal for initialization
# cf https://github.com/pytorch/pytorch/pull/5617
module.weight.data.normal_(mean=0.0, std=self.config.initializer_range)
if module.bias is not None:
module.bias.data.zero_()
elif isinstance(module, nn.Embedding):
module.weight.data.normal_(mean=0.0, std=self.config.initializer_range)
if module.padding_idx is not None:
module.weight.data[module.padding_idx].zero_()
elif isinstance(module, nn.LayerNorm):
module.bias.data.zero_()
module.weight.data.fill_(1.0)
elif isinstance(module, XLNetRelativeAttention):
for param in [
module.q,
module.k,
module.v,
module.o,
module.r,
module.r_r_bias,
module.r_s_bias,
module.r_w_bias,
module.seg_embed,
]:
param.data.normal_(mean=0.0, std=self.config.initializer_range)
elif isinstance(module, XLNetModel):
module.mask_emb.data.normal_(mean=0.0, std=self.config.initializer_range)
@dataclass
class XLNetModelOutput(ModelOutput):
"""
Output type of [`XLNetModel`].
Args:
last_hidden_state (`torch.FloatTensor` of shape `(batch_size, num_predict, hidden_size)`):
Sequence of hidden-states at the last layer of the model.
`num_predict` corresponds to `target_mapping.shape[1]`. If `target_mapping` is `None`, then `num_predict`
corresponds to `sequence_length`.
mems (`List[torch.FloatTensor]` of length `config.n_layers`):
Contains pre-computed hidden-states. Can be used (see `mems` input) to speed up sequential decoding. The
token ids which have their past given to this model should not be passed as `input_ids` as they have
already been computed.
hidden_states (`tuple(torch.FloatTensor)`, *optional*, returned when `output_hidden_states=True` is passed or when `config.output_hidden_states=True`):
Tuple of `torch.FloatTensor` (one for the output of the embeddings + one for the output of each layer) of
shape `(batch_size, sequence_length, hidden_size)`.
Hidden-states of the model at the output of each layer plus the initial embedding outputs.
attentions (`tuple(torch.FloatTensor)`, *optional*, returned when `output_attentions=True` is passed or when `config.output_attentions=True`):
Tuple of `torch.FloatTensor` (one for each layer) of shape `(batch_size, num_heads, sequence_length,
sequence_length)`.
Attentions weights after the attention softmax, used to compute the weighted average in the self-attention
heads.
"""
last_hidden_state: torch.FloatTensor
mems: Optional[List[torch.FloatTensor]] = None
hidden_states: Optional[Tuple[torch.FloatTensor]] = None
attentions: Optional[Tuple[torch.FloatTensor]] = None
@dataclass
class XLNetLMHeadModelOutput(ModelOutput):
"""
Output type of [`XLNetLMHeadModel`].
Args:
loss (`torch.FloatTensor` of shape *(1,)*, *optional*, returned when `labels` is provided)
Language modeling loss (for next-token prediction).
logits (`torch.FloatTensor` of shape `(batch_size, num_predict, config.vocab_size)`):
Prediction scores of the language modeling head (scores for each vocabulary token before SoftMax).
`num_predict` corresponds to `target_mapping.shape[1]`. If `target_mapping` is `None`, then `num_predict`
corresponds to `sequence_length`.
mems (`List[torch.FloatTensor]` of length `config.n_layers`):
Contains pre-computed hidden-states. Can be used (see `mems` input) to speed up sequential decoding. The
token ids which have their past given to this model should not be passed as `input_ids` as they have
already been computed.
hidden_states (`tuple(torch.FloatTensor)`, *optional*, returned when `output_hidden_states=True` is passed or when `config.output_hidden_states=True`):
Tuple of `torch.FloatTensor` (one for the output of the embeddings + one for the output of each layer) of
shape `(batch_size, sequence_length, hidden_size)`.
Hidden-states of the model at the output of each layer plus the initial embedding outputs.
attentions (`tuple(torch.FloatTensor)`, *optional*, returned when `output_attentions=True` is passed or when `config.output_attentions=True`):
Tuple of `torch.FloatTensor` (one for each layer) of shape `(batch_size, num_heads, sequence_length,
sequence_length)`.
Attentions weights after the attention softmax, used to compute the weighted average in the self-attention
heads.
"""
loss: Optional[torch.FloatTensor] = None
logits: torch.FloatTensor = None
mems: Optional[List[torch.FloatTensor]] = None
hidden_states: Optional[Tuple[torch.FloatTensor]] = None
attentions: Optional[Tuple[torch.FloatTensor]] = None
@dataclass
class XLNetForSequenceClassificationOutput(ModelOutput):
"""
Output type of [`XLNetForSequenceClassification`].
Args:
loss (`torch.FloatTensor` of shape `(1,)`, *optional*, returned when `label` is provided):
Classification (or regression if config.num_labels==1) loss.
logits (`torch.FloatTensor` of shape `(batch_size, config.num_labels)`):
Classification (or regression if config.num_labels==1) scores (before SoftMax).
mems (`List[torch.FloatTensor]` of length `config.n_layers`):
Contains pre-computed hidden-states. Can be used (see `mems` input) to speed up sequential decoding. The
token ids which have their past given to this model should not be passed as `input_ids` as they have
already been computed.
hidden_states (`tuple(torch.FloatTensor)`, *optional*, returned when `output_hidden_states=True` is passed or when `config.output_hidden_states=True`):
Tuple of `torch.FloatTensor` (one for the output of the embeddings + one for the output of each layer) of
shape `(batch_size, sequence_length, hidden_size)`.
Hidden-states of the model at the output of each layer plus the initial embedding outputs.
attentions (`tuple(torch.FloatTensor)`, *optional*, returned when `output_attentions=True` is passed or when `config.output_attentions=True`):
Tuple of `torch.FloatTensor` (one for each layer) of shape `(batch_size, num_heads, sequence_length,
sequence_length)`.
Attentions weights after the attention softmax, used to compute the weighted average in the self-attention
heads.
"""
loss: Optional[torch.FloatTensor] = None
logits: torch.FloatTensor = None
mems: Optional[List[torch.FloatTensor]] = None
hidden_states: Optional[Tuple[torch.FloatTensor]] = None
attentions: Optional[Tuple[torch.FloatTensor]] = None
@dataclass
class XLNetForTokenClassificationOutput(ModelOutput):
"""
Output type of [`XLNetForTokenClassificationOutput`].
Args:
loss (`torch.FloatTensor` of shape `(1,)`, *optional*, returned when `labels` is provided) :
Classification loss.
logits (`torch.FloatTensor` of shape `(batch_size, sequence_length, config.num_labels)`):
Classification scores (before SoftMax).
mems (`List[torch.FloatTensor]` of length `config.n_layers`):
Contains pre-computed hidden-states. Can be used (see `mems` input) to speed up sequential decoding. The
token ids which have their past given to this model should not be passed as `input_ids` as they have
already been computed.
hidden_states (`tuple(torch.FloatTensor)`, *optional*, returned when `output_hidden_states=True` is passed or when `config.output_hidden_states=True`):
Tuple of `torch.FloatTensor` (one for the output of the embeddings + one for the output of each layer) of
shape `(batch_size, sequence_length, hidden_size)`.
Hidden-states of the model at the output of each layer plus the initial embedding outputs.
attentions (`tuple(torch.FloatTensor)`, *optional*, returned when `output_attentions=True` is passed or when `config.output_attentions=True`):
Tuple of `torch.FloatTensor` (one for each layer) of shape `(batch_size, num_heads, sequence_length,
sequence_length)`.
Attentions weights after the attention softmax, used to compute the weighted average in the self-attention
heads.
"""
loss: Optional[torch.FloatTensor] = None
logits: torch.FloatTensor = None
mems: Optional[List[torch.FloatTensor]] = None
hidden_states: Optional[Tuple[torch.FloatTensor]] = None
attentions: Optional[Tuple[torch.FloatTensor]] = None
@dataclass
class XLNetForMultipleChoiceOutput(ModelOutput):
"""
Output type of [`XLNetForMultipleChoice`].
Args:
loss (`torch.FloatTensor` of shape *(1,)*, *optional*, returned when `labels` is provided):
Classification loss.
logits (`torch.FloatTensor` of shape `(batch_size, num_choices)`):
*num_choices* is the second dimension of the input tensors. (see *input_ids* above).
Classification scores (before SoftMax).
mems (`List[torch.FloatTensor]` of length `config.n_layers`):
Contains pre-computed hidden-states. Can be used (see `mems` input) to speed up sequential decoding. The
token ids which have their past given to this model should not be passed as `input_ids` as they have
already been computed.
hidden_states (`tuple(torch.FloatTensor)`, *optional*, returned when `output_hidden_states=True` is passed or when `config.output_hidden_states=True`):
Tuple of `torch.FloatTensor` (one for the output of the embeddings + one for the output of each layer) of
shape `(batch_size, sequence_length, hidden_size)`.
Hidden-states of the model at the output of each layer plus the initial embedding outputs.
attentions (`tuple(torch.FloatTensor)`, *optional*, returned when `output_attentions=True` is passed or when `config.output_attentions=True`):
Tuple of `torch.FloatTensor` (one for each layer) of shape `(batch_size, num_heads, sequence_length,
sequence_length)`.
Attentions weights after the attention softmax, used to compute the weighted average in the self-attention
heads.
"""
loss: Optional[torch.FloatTensor] = None
logits: torch.FloatTensor = None
mems: Optional[List[torch.FloatTensor]] = None
hidden_states: Optional[Tuple[torch.FloatTensor]] = None
attentions: Optional[Tuple[torch.FloatTensor]] = None
@dataclass
class XLNetForQuestionAnsweringSimpleOutput(ModelOutput):
"""
Output type of [`XLNetForQuestionAnsweringSimple`].
Args:
loss (`torch.FloatTensor` of shape `(1,)`, *optional*, returned when `labels` is provided):
Total span extraction loss is the sum of a Cross-Entropy for the start and end positions.
start_logits (`torch.FloatTensor` of shape `(batch_size, sequence_length,)`):
Span-start scores (before SoftMax).
end_logits (`torch.FloatTensor` of shape `(batch_size, sequence_length,)`):
Span-end scores (before SoftMax).
mems (`List[torch.FloatTensor]` of length `config.n_layers`):
Contains pre-computed hidden-states. Can be used (see `mems` input) to speed up sequential decoding. The
token ids which have their past given to this model should not be passed as `input_ids` as they have
already been computed.
hidden_states (`tuple(torch.FloatTensor)`, *optional*, returned when `output_hidden_states=True` is passed or when `config.output_hidden_states=True`):
Tuple of `torch.FloatTensor` (one for the output of the embeddings + one for the output of each layer) of
shape `(batch_size, sequence_length, hidden_size)`.
Hidden-states of the model at the output of each layer plus the initial embedding outputs.
attentions (`tuple(torch.FloatTensor)`, *optional*, returned when `output_attentions=True` is passed or when `config.output_attentions=True`):
Tuple of `torch.FloatTensor` (one for each layer) of shape `(batch_size, num_heads, sequence_length,
sequence_length)`.
Attentions weights after the attention softmax, used to compute the weighted average in the self-attention
heads.
"""
loss: Optional[torch.FloatTensor] = None
start_logits: torch.FloatTensor = None
end_logits: torch.FloatTensor = None
mems: Optional[List[torch.FloatTensor]] = None
hidden_states: Optional[Tuple[torch.FloatTensor]] = None
attentions: Optional[Tuple[torch.FloatTensor]] = None
@dataclass
class XLNetForQuestionAnsweringOutput(ModelOutput):
"""
Output type of [`XLNetForQuestionAnswering`].
Args:
loss (`torch.FloatTensor` of shape `(1,)`, *optional*, returned if both `start_positions` and `end_positions` are provided):
Classification loss as the sum of start token, end token (and is_impossible if provided) classification
losses.
start_top_log_probs (`torch.FloatTensor` of shape `(batch_size, config.start_n_top)`, *optional*, returned if `start_positions` or `end_positions` is not provided):
Log probabilities for the top config.start_n_top start token possibilities (beam-search).
start_top_index (`torch.LongTensor` of shape `(batch_size, config.start_n_top)`, *optional*, returned if `start_positions` or `end_positions` is not provided):
Indices for the top config.start_n_top start token possibilities (beam-search).
end_top_log_probs (`torch.FloatTensor` of shape `(batch_size, config.start_n_top * config.end_n_top)`, *optional*, returned if `start_positions` or `end_positions` is not provided):
Log probabilities for the top `config.start_n_top * config.end_n_top` end token possibilities
(beam-search).
end_top_index (`torch.LongTensor` of shape `(batch_size, config.start_n_top * config.end_n_top)`, *optional*, returned if `start_positions` or `end_positions` is not provided):
Indices for the top `config.start_n_top * config.end_n_top` end token possibilities (beam-search).
cls_logits (`torch.FloatTensor` of shape `(batch_size,)`, *optional*, returned if `start_positions` or `end_positions` is not provided):
Log probabilities for the `is_impossible` label of the answers.
mems (`List[torch.FloatTensor]` of length `config.n_layers`):
Contains pre-computed hidden-states. Can be used (see `mems` input) to speed up sequential decoding. The
token ids which have their past given to this model should not be passed as `input_ids` as they have
already been computed.
hidden_states (`tuple(torch.FloatTensor)`, *optional*, returned when `output_hidden_states=True` is passed or when `config.output_hidden_states=True`):
Tuple of `torch.FloatTensor` (one for the output of the embeddings + one for the output of each layer) of
shape `(batch_size, sequence_length, hidden_size)`.
Hidden-states of the model at the output of each layer plus the initial embedding outputs.
attentions (`tuple(torch.FloatTensor)`, *optional*, returned when `output_attentions=True` is passed or when `config.output_attentions=True`):
Tuple of `torch.FloatTensor` (one for each layer) of shape `(batch_size, num_heads, sequence_length,
sequence_length)`.
Attentions weights after the attention softmax, used to compute the weighted average in the self-attention
heads.
"""
loss: Optional[torch.FloatTensor] = None
start_top_log_probs: Optional[torch.FloatTensor] = None
start_top_index: Optional[torch.LongTensor] = None
end_top_log_probs: Optional[torch.FloatTensor] = None
end_top_index: Optional[torch.LongTensor] = None
cls_logits: Optional[torch.FloatTensor] = None
mems: Optional[List[torch.FloatTensor]] = None
hidden_states: Optional[Tuple[torch.FloatTensor]] = None
attentions: Optional[Tuple[torch.FloatTensor]] = None
XLNET_START_DOCSTRING = r"""
This model inherits from [`PreTrainedModel`]. Check the superclass documentation for the generic methods the
library implements for all its model (such as downloading or saving, resizing the input embeddings, pruning heads
etc.)
This model is also a PyTorch [torch.nn.Module](https://pytorch.org/docs/stable/nn.html#torch.nn.Module) subclass.
Use it as a regular PyTorch Module and refer to the PyTorch documentation for all matter related to general usage
and behavior.
Parameters:
config ([`XLNetConfig`]): Model configuration class with all the parameters of the model.
Initializing with a config file does not load the weights associated with the model, only the
configuration. Check out the [`~PreTrainedModel.from_pretrained`] method to load the model weights.
"""
XLNET_INPUTS_DOCSTRING = r"""
Args:
input_ids (`torch.LongTensor` of shape `({0})`):
Indices of input sequence tokens in the vocabulary.
Indices can be obtained using [`AutoTokenizer`]. See [`PreTrainedTokenizer.encode`] and
[`PreTrainedTokenizer.__call__`] for details.
[What are input IDs?](../glossary#input-ids)
attention_mask (`torch.FloatTensor` of shape `({0})`, *optional*):
Mask to avoid performing attention on padding token indices. Mask values selected in `[0, 1]`:
- 1 for tokens that are **not masked**,
- 0 for tokens that are **masked**.
[What are attention masks?](../glossary#attention-mask)
mems (`List[torch.FloatTensor]` of length `config.n_layers`):
Contains pre-computed hidden-states (see `mems` output below) . Can be used to speed up sequential
decoding. The token ids which have their past given to this model should not be passed as `input_ids` as
they have already been computed.
`use_mems` has to be set to `True` to make use of `mems`.
perm_mask (`torch.FloatTensor` of shape `(batch_size, sequence_length, sequence_length)`, *optional*):
Mask to indicate the attention pattern for each input token with values selected in `[0, 1]`:
- if `perm_mask[k, i, j] = 0`, i attend to j in batch k;
- if `perm_mask[k, i, j] = 1`, i does not attend to j in batch k.
If not set, each token attends to all the others (full bidirectional attention). Only used during
pretraining (to define factorization order) or for sequential decoding (generation).
target_mapping (`torch.FloatTensor` of shape `(batch_size, num_predict, sequence_length)`, *optional*):
Mask to indicate the output tokens to use. If `target_mapping[k, i, j] = 1`, the i-th predict in batch k is
on the j-th token. Only used during pretraining for partial prediction or for sequential decoding
(generation).
token_type_ids (`torch.LongTensor` of shape `({0})`, *optional*):
Segment token indices to indicate first and second portions of the inputs. Indices are selected in `[0,
1]`:
- 0 corresponds to a *sentence A* token,
- 1 corresponds to a *sentence B* token.
[What are token type IDs?](../glossary#token-type-ids)
input_mask (`torch.FloatTensor` of shape `{0}`, *optional*):
Mask to avoid performing attention on padding token indices. Negative of `attention_mask`, i.e. with 0 for
real tokens and 1 for padding which is kept for compatibility with the original code base.
Mask values selected in `[0, 1]`:
- 1 for tokens that are **masked**,
- 0 for tokens that are **not masked**.
You can only uses one of `input_mask` and `attention_mask`.
head_mask (`torch.FloatTensor` of shape `(num_heads,)` or `(num_layers, num_heads)`, *optional*):
Mask to nullify selected heads of the self-attention modules. Mask values selected in `[0, 1]`:
- 1 indicates the head is **not masked**,
- 0 indicates the head is **masked**.
inputs_embeds (`torch.FloatTensor` of shape `({0}, hidden_size)`, *optional*):
Optionally, instead of passing `input_ids` you can choose to directly pass an embedded representation. This
is useful if you want more control over how to convert `input_ids` indices into associated vectors than the
model's internal embedding lookup matrix.
output_attentions (`bool`, *optional*):
Whether or not to return the attentions tensors of all attention layers. See `attentions` under returned
tensors for more detail.
output_hidden_states (`bool`, *optional*):
Whether or not to return the hidden states of all layers. See `hidden_states` under returned tensors for
more detail.
return_dict (`bool`, *optional*):
Whether or not to return a [`~utils.ModelOutput`] instead of a plain tuple.
"""
@add_start_docstrings(
"The bare XLNet Model transformer outputting raw hidden-states without any specific head on top.",
XLNET_START_DOCSTRING,
)
class XLNetModel(XLNetPreTrainedModel):
def __init__(self, config):
super().__init__(config)
self.mem_len = config.mem_len
self.reuse_len = config.reuse_len
self.d_model = config.d_model
self.same_length = config.same_length
self.attn_type = config.attn_type
self.bi_data = config.bi_data
self.clamp_len = config.clamp_len
self.n_layer = config.n_layer
self.word_embedding = nn.Embedding(config.vocab_size, config.d_model)
self.mask_emb = nn.Parameter(torch.FloatTensor(1, 1, config.d_model))
self.layer = nn.ModuleList([XLNetLayer(config) for _ in range(config.n_layer)])
self.dropout = nn.Dropout(config.dropout)
# Initialize weights and apply final processing
self.post_init()
def get_input_embeddings(self):
return self.word_embedding
def set_input_embeddings(self, new_embeddings):
self.word_embedding = new_embeddings
def _prune_heads(self, heads_to_prune):
raise NotImplementedError
def create_mask(self, qlen, mlen):
"""
Creates causal attention mask. Float mask where 1.0 indicates masked, 0.0 indicates not-masked.
Args:
qlen: Sequence length
mlen: Mask length
::
same_length=False: same_length=True: <mlen > < qlen > <mlen > < qlen >
^ [0 0 0 0 0 1 1 1 1] [0 0 0 0 0 1 1 1 1]
[0 0 0 0 0 0 1 1 1] [1 0 0 0 0 0 1 1 1]
qlen [0 0 0 0 0 0 0 1 1] [1 1 0 0 0 0 0 1 1]
[0 0 0 0 0 0 0 0 1] [1 1 1 0 0 0 0 0 1]
v [0 0 0 0 0 0 0 0 0] [1 1 1 1 0 0 0 0 0]
"""
mask = torch.ones(qlen, qlen + mlen, self.device)
if self.same_length:
mask_lo = mask[:, :qlen].tril(-1)
mask.triu_(mlen + 1)
mask[:, :qlen] += mask_lo
else:
mask.triu_(mlen + 1)
return mask
def cache_mem(self, curr_out, prev_mem):
# cache hidden states into memory.
if self.reuse_len is not None and self.reuse_len > 0:
curr_out = curr_out[: self.reuse_len]
if self.mem_len is None or self.mem_len == 0:
# If `use_mems` is active but no `mem_len` is defined, the model behaves like GPT-2 at inference time
# and returns all of the past and current hidden states.
cutoff = 0
else:
# If `use_mems` is active and `mem_len` is defined, the model returns the last `mem_len` hidden
# states. This is the preferred setting for training and long-form generation.
cutoff = -self.mem_len
if prev_mem is None:
# if `use_mems` is active and `mem_len` is defined, the model
new_mem = curr_out[cutoff:]
else:
new_mem = torch.cat([prev_mem, curr_out], dim=0)[cutoff:]
return new_mem.detach()
@staticmethod
def positional_embedding(pos_seq, inv_freq, bsz=None):
sinusoid_inp = torch.einsum("i,d->id", pos_seq, inv_freq)
pos_emb = torch.cat([torch.sin(sinusoid_inp), torch.cos(sinusoid_inp)], dim=-1)
pos_emb = pos_emb[:, None, :]
if bsz is not None:
pos_emb = pos_emb.expand(-1, bsz, -1)
return pos_emb
def relative_positional_encoding(self, qlen, klen, bsz=None):
# create relative positional encoding.
freq_seq = torch.arange(0, self.d_model, 2.0, dtype=torch.float)
inv_freq = 1 / torch.pow(10000, (freq_seq / self.d_model))
if self.attn_type == "bi":
# beg, end = klen - 1, -qlen
beg, end = klen, -qlen
elif self.attn_type == "uni":
# beg, end = klen - 1, -1
beg, end = klen, -1
else:
raise ValueError(f"Unknown `attn_type` {self.attn_type}.")
if self.bi_data:
fwd_pos_seq = torch.arange(beg, end, -1.0, dtype=torch.float)
bwd_pos_seq = torch.arange(-beg, -end, 1.0, dtype=torch.float)
if self.clamp_len > 0:
fwd_pos_seq = fwd_pos_seq.clamp(-self.clamp_len, self.clamp_len)
bwd_pos_seq = bwd_pos_seq.clamp(-self.clamp_len, self.clamp_len)
if bsz is not None:
fwd_pos_emb = self.positional_embedding(fwd_pos_seq, inv_freq, bsz // 2)
bwd_pos_emb = self.positional_embedding(bwd_pos_seq, inv_freq, bsz // 2)
else:
fwd_pos_emb = self.positional_embedding(fwd_pos_seq, inv_freq)
bwd_pos_emb = self.positional_embedding(bwd_pos_seq, inv_freq)
pos_emb = torch.cat([fwd_pos_emb, bwd_pos_emb], dim=1)
else:
fwd_pos_seq = torch.arange(beg, end, -1.0)
if self.clamp_len > 0:
fwd_pos_seq = fwd_pos_seq.clamp(-self.clamp_len, self.clamp_len)
pos_emb = self.positional_embedding(fwd_pos_seq, inv_freq, bsz)
return pos_emb
@add_start_docstrings_to_model_forward(XLNET_INPUTS_DOCSTRING.format("batch_size, sequence_length"))
@add_code_sample_docstrings(
checkpoint=_CHECKPOINT_FOR_DOC,
output_type=XLNetModelOutput,
config_class=_CONFIG_FOR_DOC,
)
def forward(
self,
input_ids: Optional[torch.Tensor] = None,
attention_mask: Optional[torch.Tensor] = None,
mems: Optional[torch.Tensor] = None,
perm_mask: Optional[torch.Tensor] = None,
target_mapping: Optional[torch.Tensor] = None,
token_type_ids: Optional[torch.Tensor] = None,
input_mask: Optional[torch.Tensor] = None,
head_mask: Optional[torch.Tensor] = None,
inputs_embeds: Optional[torch.Tensor] = None,
use_mems: Optional[bool] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
**kwargs, # delete after depreciation warning is removed
) -> Union[Tuple, XLNetModelOutput]:
output_attentions = output_attentions if output_attentions is not None else self.config.output_attentions
output_hidden_states = (
output_hidden_states if output_hidden_states is not None else self.config.output_hidden_states
)
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
if "use_cache" in kwargs:
warnings.warn(
"The `use_cache` argument is deprecated and will be removed in a future version, use `use_mems`"
" instead.",
FutureWarning,
)
use_mems = kwargs["use_cache"]
if self.training:
use_mems = use_mems if use_mems is not None else self.config.use_mems_train
else:
use_mems = use_mems if use_mems is not None else self.config.use_mems_eval
# the original code for XLNet uses shapes [len, bsz] with the batch dimension at the end
# but we want a unified interface in the library with the batch size on the first dimension
# so we move here the first dimension (batch) to the end
if input_ids is not None and inputs_embeds is not None:
raise ValueError("You cannot specify both input_ids and inputs_embeds at the same time")
elif input_ids is not None:
input_ids = input_ids.transpose(0, 1).contiguous()
qlen, bsz = input_ids.shape[0], input_ids.shape[1]
elif inputs_embeds is not None:
inputs_embeds = inputs_embeds.transpose(0, 1).contiguous()
qlen, bsz = inputs_embeds.shape[0], inputs_embeds.shape[1]
else:
raise ValueError("You have to specify either input_ids or inputs_embeds")
token_type_ids = token_type_ids.transpose(0, 1).contiguous() if token_type_ids is not None else None
input_mask = input_mask.transpose(0, 1).contiguous() if input_mask is not None else None
attention_mask = attention_mask.transpose(0, 1).contiguous() if attention_mask is not None else None
perm_mask = perm_mask.permute(1, 2, 0).contiguous() if perm_mask is not None else None
target_mapping = target_mapping.permute(1, 2, 0).contiguous() if target_mapping is not None else None
mlen = mems[0].shape[0] if mems is not None and mems[0] is not None else 0
klen = mlen + qlen
dtype_float = self.dtype
device = self.device
# Attention mask
# causal attention mask
if self.attn_type == "uni":
attn_mask = self.create_mask(qlen, mlen)
attn_mask = attn_mask[:, :, None, None]
elif self.attn_type == "bi":
attn_mask = None
else:
raise ValueError(f"Unsupported attention type: {self.attn_type}")
# data mask: input mask & perm mask
assert input_mask is None or attention_mask is None, "You can only use one of input_mask (uses 1 for padding) "
"or attention_mask (uses 0 for padding, added for compatibility with BERT). Please choose one."
if input_mask is None and attention_mask is not None:
input_mask = 1.0 - attention_mask
if input_mask is not None and perm_mask is not None:
data_mask = input_mask[None] + perm_mask
elif input_mask is not None and perm_mask is None:
data_mask = input_mask[None]
elif input_mask is None and perm_mask is not None:
data_mask = perm_mask
else:
data_mask = None
if data_mask is not None:
# all mems can be attended to
if mlen > 0:
mems_mask = torch.zeros([data_mask.shape[0], mlen, bsz]).to(data_mask)
data_mask = torch.cat([mems_mask, data_mask], dim=1)
if attn_mask is None:
attn_mask = data_mask[:, :, :, None]
else:
attn_mask += data_mask[:, :, :, None]
if attn_mask is not None:
attn_mask = (attn_mask > 0).to(dtype_float)
if attn_mask is not None:
non_tgt_mask = -torch.eye(qlen).to(attn_mask)
if mlen > 0:
non_tgt_mask = torch.cat([torch.zeros([qlen, mlen]).to(attn_mask), non_tgt_mask], dim=-1)
non_tgt_mask = ((attn_mask + non_tgt_mask[:, :, None, None]) > 0).to(attn_mask)
else:
non_tgt_mask = None
# Word embeddings and prepare h & g hidden states
if inputs_embeds is not None:
word_emb_k = inputs_embeds
else:
word_emb_k = self.word_embedding(input_ids)
output_h = self.dropout(word_emb_k)
if target_mapping is not None:
word_emb_q = self.mask_emb.expand(target_mapping.shape[0], bsz, -1)
# else: # We removed the inp_q input which was same as target mapping
# inp_q_ext = inp_q[:, :, None]
# word_emb_q = inp_q_ext * self.mask_emb + (1 - inp_q_ext) * word_emb_k
output_g = self.dropout(word_emb_q)
else:
output_g = None
# Segment embedding
if token_type_ids is not None:
# Convert `token_type_ids` to one-hot `seg_mat`
if mlen > 0:
mem_pad = torch.zeros([mlen, bsz], dtype=torch.long, device=device)
cat_ids = torch.cat([mem_pad, token_type_ids], dim=0)
else:
cat_ids = token_type_ids
# `1` indicates not in the same segment [qlen x klen x bsz]
seg_mat = (token_type_ids[:, None] != cat_ids[None, :]).long()
seg_mat = nn.functional.one_hot(seg_mat, num_classes=2).to(dtype_float)
else:
seg_mat = None
# Positional encoding
pos_emb = self.relative_positional_encoding(qlen, klen, bsz=bsz)
pos_emb = pos_emb.to(output_h.device)
pos_emb = self.dropout(pos_emb)
# Prepare head mask if needed
# 1.0 in head_mask indicate we keep the head
# attention_probs has shape bsz x n_heads x N x N
# input head_mask has shape [num_heads] or [num_hidden_layers x num_heads] (a head_mask for each layer)
# and head_mask is converted to shape [num_hidden_layers x qlen x klen x bsz x n_head]
if head_mask is not None:
if head_mask.dim() == 1:
head_mask = head_mask.unsqueeze(0).unsqueeze(0).unsqueeze(0).unsqueeze(0)
head_mask = head_mask.expand(self.n_layer, -1, -1, -1, -1)
elif head_mask.dim() == 2:
head_mask = head_mask.unsqueeze(1).unsqueeze(1).unsqueeze(1)
head_mask = head_mask.to(
dtype=next(self.parameters()).dtype
) # switch to float if need + fp16 compatibility
else:
head_mask = [None] * self.n_layer
new_mems = ()
if mems is None:
mems = [None] * len(self.layer)
attentions = [] if output_attentions else None
hidden_states = [] if output_hidden_states else None
for i, layer_module in enumerate(self.layer):
if use_mems:
# cache new mems
new_mems = new_mems + (self.cache_mem(output_h, mems[i]),)
if output_hidden_states:
hidden_states.append((output_h, output_g) if output_g is not None else output_h)
outputs = layer_module(
output_h,
output_g,
attn_mask_h=non_tgt_mask,
attn_mask_g=attn_mask,
r=pos_emb,
seg_mat=seg_mat,
mems=mems[i],
target_mapping=target_mapping,
head_mask=head_mask[i],
output_attentions=output_attentions,
)
output_h, output_g = outputs[:2]
if output_attentions:
attentions.append(outputs[2])
# Add last hidden state
if output_hidden_states:
hidden_states.append((output_h, output_g) if output_g is not None else output_h)
output = self.dropout(output_g if output_g is not None else output_h)
# Prepare outputs, we transpose back here to shape [bsz, len, hidden_dim] (cf. beginning of forward() method)
output = output.permute(1, 0, 2).contiguous()
if not use_mems:
new_mems = None
if output_hidden_states:
if output_g is not None:
hidden_states = tuple(h.permute(1, 0, 2).contiguous() for hs in hidden_states for h in hs)
else:
hidden_states = tuple(hs.permute(1, 0, 2).contiguous() for hs in hidden_states)
if output_attentions:
if target_mapping is not None:
# when target_mapping is provided, there are 2-tuple of attentions
attentions = tuple(
tuple(att_stream.permute(2, 3, 0, 1).contiguous() for att_stream in t) for t in attentions
)
else:
attentions = tuple(t.permute(2, 3, 0, 1).contiguous() for t in attentions)
if not return_dict:
return tuple(v for v in [output, new_mems, hidden_states, attentions] if v is not None)
return XLNetModelOutput(
last_hidden_state=output, mems=new_mems, hidden_states=hidden_states, attentions=attentions
)
@add_start_docstrings(
"""
XLNet Model with a language modeling head on top (linear layer with weights tied to the input embeddings).
""",
XLNET_START_DOCSTRING,
)
class XLNetLMHeadModel(XLNetPreTrainedModel):
_tied_weights_keys = ["lm_loss.weight"]
def __init__(self, config):
super().__init__(config)
self.attn_type = config.attn_type
self.same_length = config.same_length
self.transformer = XLNetModel(config)
self.lm_loss = nn.Linear(config.d_model, config.vocab_size, bias=True)
# Initialize weights and apply final processing
self.post_init()
def get_output_embeddings(self):
return self.lm_loss
def set_output_embeddings(self, new_embeddings):
self.lm_loss = new_embeddings
def prepare_inputs_for_generation(self, input_ids, past_key_values=None, use_mems=None, **kwargs):
# Add dummy token at the end (no attention on this one)
effective_batch_size = input_ids.shape[0]
dummy_token = torch.zeros((effective_batch_size, 1), dtype=torch.long, device=input_ids.device)
# At every pass, the attention values for the new token and the two last generated tokens
# are computed, the rest is reloaded from the `past` cache. A purely auto-regressive model would have
# offset = 1; offset = 2 seems to have slightly better computation.
offset = 2
if past_key_values:
input_ids = torch.cat([input_ids[:, -offset:], dummy_token], dim=1)
else:
input_ids = torch.cat([input_ids, dummy_token], dim=1)
# Build permutation mask so that previous tokens don't see last token
sequence_length = input_ids.shape[1]
perm_mask = torch.zeros(
(effective_batch_size, sequence_length, sequence_length), dtype=torch.float, device=input_ids.device
)
perm_mask[:, :, -1] = 1.0
# We'll only predict the last token
target_mapping = torch.zeros(
(effective_batch_size, 1, sequence_length), dtype=torch.float, device=input_ids.device
)
target_mapping[:, 0, -1] = 1.0
inputs = {
"input_ids": input_ids,
"perm_mask": perm_mask,
"target_mapping": target_mapping,
"use_mems": use_mems,
}
# if past is defined in model kwargs then use it for faster decoding
if past_key_values:
inputs["mems"] = tuple(layer_past[:-offset, :, :] for layer_past in past_key_values)
return inputs
@add_start_docstrings_to_model_forward(XLNET_INPUTS_DOCSTRING.format("batch_size, sequence_length"))
@replace_return_docstrings(output_type=XLNetLMHeadModelOutput, config_class=_CONFIG_FOR_DOC)
def forward(
self,
input_ids: Optional[torch.Tensor] = None,
attention_mask: Optional[torch.Tensor] = None,
mems: Optional[torch.Tensor] = None,
perm_mask: Optional[torch.Tensor] = None,
target_mapping: Optional[torch.Tensor] = None,
token_type_ids: Optional[torch.Tensor] = None,
input_mask: Optional[torch.Tensor] = None,
head_mask: Optional[torch.Tensor] = None,
inputs_embeds: Optional[torch.Tensor] = None,
labels: Optional[torch.Tensor] = None,
use_mems: Optional[bool] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
**kwargs, # delete when `use_cache` is removed in XLNetModel
) -> Union[Tuple, XLNetLMHeadModelOutput]:
r"""
labels (`torch.LongTensor` of shape `(batch_size, num_predict)`, *optional*):
Labels for masked language modeling. `num_predict` corresponds to `target_mapping.shape[1]`. If
`target_mapping` is `None`, then `num_predict` corresponds to `sequence_length`.
The labels should correspond to the masked input words that should be predicted and depends on
`target_mapping`. Note in order to perform standard auto-regressive language modeling a *<mask>* token has
to be added to the `input_ids` (see the `prepare_inputs_for_generation` function and examples below)
Indices are selected in `[-100, 0, ..., config.vocab_size]` All labels set to `-100` are ignored, the loss
is only computed for labels in `[0, ..., config.vocab_size]`
Return:
Examples:
```python
>>> from transformers import AutoTokenizer, XLNetLMHeadModel
>>> import torch
>>> tokenizer = AutoTokenizer.from_pretrained("xlnet-large-cased")
>>> model = XLNetLMHeadModel.from_pretrained("xlnet-large-cased")
>>> # We show how to setup inputs to predict a next token using a bi-directional context.
>>> input_ids = torch.tensor(
... tokenizer.encode("Hello, my dog is very <mask>", add_special_tokens=False)
... ).unsqueeze(
... 0
... ) # We will predict the masked token
>>> perm_mask = torch.zeros((1, input_ids.shape[1], input_ids.shape[1]), dtype=torch.float)
>>> perm_mask[:, :, -1] = 1.0 # Previous tokens don't see last token
>>> target_mapping = torch.zeros(
... (1, 1, input_ids.shape[1]), dtype=torch.float
... ) # Shape [1, 1, seq_length] => let's predict one token
>>> target_mapping[
... 0, 0, -1
... ] = 1.0 # Our first (and only) prediction will be the last token of the sequence (the masked token)
>>> outputs = model(input_ids, perm_mask=perm_mask, target_mapping=target_mapping)
>>> next_token_logits = outputs[
... 0
... ] # Output has shape [target_mapping.size(0), target_mapping.size(1), config.vocab_size]
>>> # The same way can the XLNetLMHeadModel be used to be trained by standard auto-regressive language modeling.
>>> input_ids = torch.tensor(
... tokenizer.encode("Hello, my dog is very <mask>", add_special_tokens=False)
... ).unsqueeze(
... 0
... ) # We will predict the masked token
>>> labels = torch.tensor(tokenizer.encode("cute", add_special_tokens=False)).unsqueeze(0)
>>> assert labels.shape[0] == 1, "only one word will be predicted"
>>> perm_mask = torch.zeros((1, input_ids.shape[1], input_ids.shape[1]), dtype=torch.float)
>>> perm_mask[
... :, :, -1
... ] = 1.0 # Previous tokens don't see last token as is done in standard auto-regressive lm training
>>> target_mapping = torch.zeros(
... (1, 1, input_ids.shape[1]), dtype=torch.float
... ) # Shape [1, 1, seq_length] => let's predict one token
>>> target_mapping[
... 0, 0, -1
... ] = 1.0 # Our first (and only) prediction will be the last token of the sequence (the masked token)
>>> outputs = model(input_ids, perm_mask=perm_mask, target_mapping=target_mapping, labels=labels)
>>> loss = outputs.loss
>>> next_token_logits = (
... outputs.logits
... ) # Logits have shape [target_mapping.size(0), target_mapping.size(1), config.vocab_size]
```"""
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
transformer_outputs = self.transformer(
input_ids,
attention_mask=attention_mask,
mems=mems,
perm_mask=perm_mask,
target_mapping=target_mapping,
token_type_ids=token_type_ids,
input_mask=input_mask,
head_mask=head_mask,
inputs_embeds=inputs_embeds,
use_mems=use_mems,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
**kwargs,
)
logits = self.lm_loss(transformer_outputs[0])
loss = None
if labels is not None:
# Flatten the tokens
loss_fct = CrossEntropyLoss()
loss = loss_fct(logits.view(-1, logits.size(-1)), labels.view(-1))
if not return_dict:
output = (logits,) + transformer_outputs[1:]
return ((loss,) + output) if loss is not None else output
return XLNetLMHeadModelOutput(
loss=loss,
logits=logits,
mems=transformer_outputs.mems,
hidden_states=transformer_outputs.hidden_states,
attentions=transformer_outputs.attentions,
)
@staticmethod
def _reorder_cache(mems: List[torch.Tensor], beam_idx: torch.Tensor) -> List[torch.Tensor]:
"""
This function is used to re-order the `mems` cache if [`~PreTrainedModel.beam_search`] or
[`~PreTrainedModel.beam_sample`] is called. This is required to match `mems` with the correct beam_idx at every
generation step.
"""
return [layer_past.index_select(1, beam_idx.to(layer_past.device)) for layer_past in mems]
@add_start_docstrings(
"""
XLNet Model with a sequence classification/regression head on top (a linear layer on top of the pooled output) e.g.
for GLUE tasks.
""",
XLNET_START_DOCSTRING,
)
class XLNetForSequenceClassification(XLNetPreTrainedModel):
def __init__(self, config):
super().__init__(config)
self.num_labels = config.num_labels
self.config = config
self.transformer = XLNetModel(config)
self.sequence_summary = SequenceSummary(config)
self.logits_proj = nn.Linear(config.d_model, config.num_labels)
# Initialize weights and apply final processing
self.post_init()
@add_start_docstrings_to_model_forward(XLNET_INPUTS_DOCSTRING.format("batch_size, sequence_length"))
@add_code_sample_docstrings(
checkpoint=_CHECKPOINT_FOR_DOC,
output_type=XLNetForSequenceClassificationOutput,
config_class=_CONFIG_FOR_DOC,
)
def forward(
self,
input_ids: Optional[torch.Tensor] = None,
attention_mask: Optional[torch.Tensor] = None,
mems: Optional[torch.Tensor] = None,
perm_mask: Optional[torch.Tensor] = None,
target_mapping: Optional[torch.Tensor] = None,
token_type_ids: Optional[torch.Tensor] = None,
input_mask: Optional[torch.Tensor] = None,
head_mask: Optional[torch.Tensor] = None,
inputs_embeds: Optional[torch.Tensor] = None,
labels: Optional[torch.Tensor] = None,
use_mems: Optional[bool] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
**kwargs, # delete when `use_cache` is removed in XLNetModel
) -> Union[Tuple, XLNetForSequenceClassificationOutput]:
r"""
labels (`torch.LongTensor` of shape `(batch_size,)`, *optional*):
Labels for computing the sequence classification/regression loss. Indices should be in `[0, ...,
config.num_labels - 1]`. If `config.num_labels == 1` a regression loss is computed (Mean-Square loss), If
`config.num_labels > 1` a classification loss is computed (Cross-Entropy).
"""
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
transformer_outputs = self.transformer(
input_ids,
attention_mask=attention_mask,
mems=mems,
perm_mask=perm_mask,
target_mapping=target_mapping,
token_type_ids=token_type_ids,
input_mask=input_mask,
head_mask=head_mask,
inputs_embeds=inputs_embeds,
use_mems=use_mems,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
**kwargs,
)
output = transformer_outputs[0]
output = self.sequence_summary(output)
logits = self.logits_proj(output)
loss = None
if labels is not None:
if self.config.problem_type is None:
if self.num_labels == 1:
self.config.problem_type = "regression"
elif self.num_labels > 1 and (labels.dtype == torch.long or labels.dtype == torch.int):
self.config.problem_type = "single_label_classification"
else:
self.config.problem_type = "multi_label_classification"
if self.config.problem_type == "regression":
loss_fct = MSELoss()
if self.num_labels == 1:
loss = loss_fct(logits.squeeze(), labels.squeeze())
else:
loss = loss_fct(logits, labels)
elif self.config.problem_type == "single_label_classification":
loss_fct = CrossEntropyLoss()
loss = loss_fct(logits.view(-1, self.num_labels), labels.view(-1))
elif self.config.problem_type == "multi_label_classification":
loss_fct = BCEWithLogitsLoss()
loss = loss_fct(logits, labels)
if not return_dict:
output = (logits,) + transformer_outputs[1:]
return ((loss,) + output) if loss is not None else output
return XLNetForSequenceClassificationOutput(
loss=loss,
logits=logits,
mems=transformer_outputs.mems,
hidden_states=transformer_outputs.hidden_states,
attentions=transformer_outputs.attentions,
)
@add_start_docstrings(
"""
XLNet Model with a token classification head on top (a linear layer on top of the hidden-states output) e.g. for
Named-Entity-Recognition (NER) tasks.
""",
XLNET_START_DOCSTRING,
)
class XLNetForTokenClassification(XLNetPreTrainedModel):
def __init__(self, config):
super().__init__(config)
self.num_labels = config.num_labels
self.transformer = XLNetModel(config)
self.classifier = nn.Linear(config.hidden_size, config.num_labels)
# Initialize weights and apply final processing
self.post_init()
@add_start_docstrings_to_model_forward(XLNET_INPUTS_DOCSTRING.format("batch_size, sequence_length"))
@add_code_sample_docstrings(
checkpoint=_CHECKPOINT_FOR_DOC,
output_type=XLNetForTokenClassificationOutput,
config_class=_CONFIG_FOR_DOC,
)
def forward(
self,
input_ids: Optional[torch.Tensor] = None,
attention_mask: Optional[torch.Tensor] = None,
mems: Optional[torch.Tensor] = None,
perm_mask: Optional[torch.Tensor] = None,
target_mapping: Optional[torch.Tensor] = None,
token_type_ids: Optional[torch.Tensor] = None,
input_mask: Optional[torch.Tensor] = None,
head_mask: Optional[torch.Tensor] = None,
inputs_embeds: Optional[torch.Tensor] = None,
labels: Optional[torch.Tensor] = None,
use_mems: Optional[bool] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
**kwargs, # delete when `use_cache` is removed in XLNetModel
) -> Union[Tuple, XLNetForTokenClassificationOutput]:
r"""
labels (`torch.LongTensor` of shape `(batch_size,)`, *optional*):
Labels for computing the multiple choice classification loss. Indices should be in `[0, ..., num_choices]`
where *num_choices* is the size of the second dimension of the input tensors. (see *input_ids* above)
"""
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
outputs = self.transformer(
input_ids,
attention_mask=attention_mask,
mems=mems,
perm_mask=perm_mask,
target_mapping=target_mapping,
token_type_ids=token_type_ids,
input_mask=input_mask,
head_mask=head_mask,
inputs_embeds=inputs_embeds,
use_mems=use_mems,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
sequence_output = outputs[0]
logits = self.classifier(sequence_output)
loss = None
if labels is not None:
loss_fct = CrossEntropyLoss()
loss = loss_fct(logits.view(-1, self.num_labels), labels.view(-1))
if not return_dict:
output = (logits,) + outputs[1:]
return ((loss,) + output) if loss is not None else output
return XLNetForTokenClassificationOutput(
loss=loss,
logits=logits,
mems=outputs.mems,
hidden_states=outputs.hidden_states,
attentions=outputs.attentions,
)
@add_start_docstrings(
"""
XLNet Model with a multiple choice classification head on top (a linear layer on top of the pooled output and a
softmax) e.g. for RACE/SWAG tasks.
""",
XLNET_START_DOCSTRING,
)
class XLNetForMultipleChoice(XLNetPreTrainedModel):
def __init__(self, config):
super().__init__(config)
self.transformer = XLNetModel(config)
self.sequence_summary = SequenceSummary(config)
self.logits_proj = nn.Linear(config.d_model, 1)
# Initialize weights and apply final processing
self.post_init()
@add_start_docstrings_to_model_forward(XLNET_INPUTS_DOCSTRING.format("batch_size, num_choices, sequence_length"))
@add_code_sample_docstrings(
checkpoint=_CHECKPOINT_FOR_DOC,
output_type=XLNetForMultipleChoiceOutput,
config_class=_CONFIG_FOR_DOC,
)
def forward(
self,
input_ids: Optional[torch.Tensor] = None,
token_type_ids: Optional[torch.Tensor] = None,
input_mask: Optional[torch.Tensor] = None,
attention_mask: Optional[torch.Tensor] = None,
mems: Optional[torch.Tensor] = None,
perm_mask: Optional[torch.Tensor] = None,
target_mapping: Optional[torch.Tensor] = None,
head_mask: Optional[torch.Tensor] = None,
inputs_embeds: Optional[torch.Tensor] = None,
labels: Optional[torch.Tensor] = None,
use_mems: Optional[bool] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
**kwargs, # delete when `use_cache` is removed in XLNetModel
) -> Union[Tuple, XLNetForMultipleChoiceOutput]:
r"""
labels (`torch.LongTensor` of shape `(batch_size,)`, *optional*):
Labels for computing the multiple choice classification loss. Indices should be in `[0, ...,
num_choices-1]` where `num_choices` is the size of the second dimension of the input tensors. (See
`input_ids` above)
"""
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
num_choices = input_ids.shape[1] if input_ids is not None else inputs_embeds.shape[1]
flat_input_ids = input_ids.view(-1, input_ids.size(-1)) if input_ids is not None else None
flat_token_type_ids = token_type_ids.view(-1, token_type_ids.size(-1)) if token_type_ids is not None else None
flat_attention_mask = attention_mask.view(-1, attention_mask.size(-1)) if attention_mask is not None else None
flat_input_mask = input_mask.view(-1, input_mask.size(-1)) if input_mask is not None else None
flat_inputs_embeds = (
inputs_embeds.view(-1, inputs_embeds.size(-2), inputs_embeds.size(-1))
if inputs_embeds is not None
else None
)
transformer_outputs = self.transformer(
flat_input_ids,
token_type_ids=flat_token_type_ids,
input_mask=flat_input_mask,
attention_mask=flat_attention_mask,
mems=mems,
perm_mask=perm_mask,
target_mapping=target_mapping,
head_mask=head_mask,
inputs_embeds=flat_inputs_embeds,
use_mems=use_mems,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
**kwargs,
)
output = transformer_outputs[0]
output = self.sequence_summary(output)
logits = self.logits_proj(output)
reshaped_logits = logits.view(-1, num_choices)
loss = None
if labels is not None:
loss_fct = CrossEntropyLoss()
loss = loss_fct(reshaped_logits, labels.view(-1))
if not return_dict:
output = (reshaped_logits,) + transformer_outputs[1:]
return ((loss,) + output) if loss is not None else output
return XLNetForMultipleChoiceOutput(
loss=loss,
logits=reshaped_logits,
mems=transformer_outputs.mems,
hidden_states=transformer_outputs.hidden_states,
attentions=transformer_outputs.attentions,
)
@add_start_docstrings(
"""
XLNet Model with a span classification head on top for extractive question-answering tasks like SQuAD (a linear
layers on top of the hidden-states output to compute `span start logits` and `span end logits`).
""",
XLNET_START_DOCSTRING,
)
class XLNetForQuestionAnsweringSimple(XLNetPreTrainedModel):
def __init__(self, config):
super().__init__(config)
self.num_labels = config.num_labels
self.transformer = XLNetModel(config)
self.qa_outputs = nn.Linear(config.hidden_size, config.num_labels)
# Initialize weights and apply final processing
self.post_init()
@add_start_docstrings_to_model_forward(XLNET_INPUTS_DOCSTRING.format("batch_size, sequence_length"))
@add_code_sample_docstrings(
checkpoint=_CHECKPOINT_FOR_DOC,
output_type=XLNetForQuestionAnsweringSimpleOutput,
config_class=_CONFIG_FOR_DOC,
)
def forward(
self,
input_ids: Optional[torch.Tensor] = None,
attention_mask: Optional[torch.Tensor] = None,
mems: Optional[torch.Tensor] = None,
perm_mask: Optional[torch.Tensor] = None,
target_mapping: Optional[torch.Tensor] = None,
token_type_ids: Optional[torch.Tensor] = None,
input_mask: Optional[torch.Tensor] = None,
head_mask: Optional[torch.Tensor] = None,
inputs_embeds: Optional[torch.Tensor] = None,
start_positions: Optional[torch.Tensor] = None,
end_positions: Optional[torch.Tensor] = None,
use_mems: Optional[bool] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
**kwargs, # delete when `use_cache` is removed in XLNetModel
) -> Union[Tuple, XLNetForQuestionAnsweringSimpleOutput]:
r"""
start_positions (`torch.LongTensor` of shape `(batch_size,)`, *optional*):
Labels for position (index) of the start of the labelled span for computing the token classification loss.
Positions are clamped to the length of the sequence (`sequence_length`). Position outside of the sequence
are not taken into account for computing the loss.
end_positions (`torch.LongTensor` of shape `(batch_size,)`, *optional*):
Labels for position (index) of the end of the labelled span for computing the token classification loss.
Positions are clamped to the length of the sequence (`sequence_length`). Position outside of the sequence
are not taken into account for computing the loss.
"""
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
outputs = self.transformer(
input_ids,
attention_mask=attention_mask,
mems=mems,
perm_mask=perm_mask,
target_mapping=target_mapping,
token_type_ids=token_type_ids,
input_mask=input_mask,
head_mask=head_mask,
inputs_embeds=inputs_embeds,
use_mems=use_mems,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
**kwargs,
)
sequence_output = outputs[0]
logits = self.qa_outputs(sequence_output)
start_logits, end_logits = logits.split(1, dim=-1)
start_logits = start_logits.squeeze(-1).contiguous()
end_logits = end_logits.squeeze(-1).contiguous()
total_loss = None
if start_positions is not None and end_positions is not None:
# If we are on multi-GPU, split add a dimension
if len(start_positions.size()) > 1:
start_positions = start_positions.squeeze(-1)
if len(end_positions.size()) > 1:
end_positions = end_positions.squeeze(-1)
# sometimes the start/end positions are outside our model inputs, we ignore these terms
ignored_index = start_logits.size(1)
start_positions = start_positions.clamp(0, ignored_index)
end_positions = end_positions.clamp(0, ignored_index)
loss_fct = CrossEntropyLoss(ignore_index=ignored_index)
start_loss = loss_fct(start_logits, start_positions)
end_loss = loss_fct(end_logits, end_positions)
total_loss = (start_loss + end_loss) / 2
if not return_dict:
output = (start_logits, end_logits) + outputs[1:]
return ((total_loss,) + output) if total_loss is not None else output
return XLNetForQuestionAnsweringSimpleOutput(
loss=total_loss,
start_logits=start_logits,
end_logits=end_logits,
mems=outputs.mems,
hidden_states=outputs.hidden_states,
attentions=outputs.attentions,
)
@add_start_docstrings(
"""
XLNet Model with a span classification head on top for extractive question-answering tasks like SQuAD (a linear
layers on top of the hidden-states output to compute `span start logits` and `span end logits`).
""",
XLNET_START_DOCSTRING,
)
class XLNetForQuestionAnswering(XLNetPreTrainedModel):
def __init__(self, config):
super().__init__(config)
self.start_n_top = config.start_n_top
self.end_n_top = config.end_n_top
self.transformer = XLNetModel(config)
self.start_logits = PoolerStartLogits(config)
self.end_logits = PoolerEndLogits(config)
self.answer_class = PoolerAnswerClass(config)
# Initialize weights and apply final processing
self.post_init()
@add_start_docstrings_to_model_forward(XLNET_INPUTS_DOCSTRING.format("batch_size, sequence_length"))
@replace_return_docstrings(output_type=XLNetForQuestionAnsweringOutput, config_class=_CONFIG_FOR_DOC)
def forward(
self,
input_ids: Optional[torch.Tensor] = None,
attention_mask: Optional[torch.Tensor] = None,
mems: Optional[torch.Tensor] = None,
perm_mask: Optional[torch.Tensor] = None,
target_mapping: Optional[torch.Tensor] = None,
token_type_ids: Optional[torch.Tensor] = None,
input_mask: Optional[torch.Tensor] = None,
head_mask: Optional[torch.Tensor] = None,
inputs_embeds: Optional[torch.Tensor] = None,
start_positions: Optional[torch.Tensor] = None,
end_positions: Optional[torch.Tensor] = None,
is_impossible: Optional[torch.Tensor] = None,
cls_index: Optional[torch.Tensor] = None,
p_mask: Optional[torch.Tensor] = None,
use_mems: Optional[bool] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
**kwargs, # delete when `use_cache` is removed in XLNetModel
) -> Union[Tuple, XLNetForQuestionAnsweringOutput]:
r"""
start_positions (`torch.LongTensor` of shape `(batch_size,)`, *optional*):
Labels for position (index) of the start of the labelled span for computing the token classification loss.
Positions are clamped to the length of the sequence (`sequence_length`). Position outside of the sequence
are not taken into account for computing the loss.
end_positions (`torch.LongTensor` of shape `(batch_size,)`, *optional*):
Labels for position (index) of the end of the labelled span for computing the token classification loss.
Positions are clamped to the length of the sequence (`sequence_length`). Position outside of the sequence
are not taken into account for computing the loss.
is_impossible (`torch.LongTensor` of shape `(batch_size,)`, *optional*):
Labels whether a question has an answer or no answer (SQuAD 2.0)
cls_index (`torch.LongTensor` of shape `(batch_size,)`, *optional*):
Labels for position (index) of the classification token to use as input for computing plausibility of the
answer.
p_mask (`torch.FloatTensor` of shape `(batch_size, sequence_length)`, *optional*):
Optional mask of tokens which can't be in answers (e.g. [CLS], [PAD], ...). 1.0 means token should be
masked. 0.0 mean token is not masked.
Returns:
Example:
```python
>>> from transformers import AutoTokenizer, XLNetForQuestionAnswering
>>> import torch
>>> tokenizer = AutoTokenizer.from_pretrained("xlnet-base-cased")
>>> model = XLNetForQuestionAnswering.from_pretrained("xlnet-base-cased")
>>> input_ids = torch.tensor(tokenizer.encode("Hello, my dog is cute", add_special_tokens=True)).unsqueeze(
... 0
... ) # Batch size 1
>>> start_positions = torch.tensor([1])
>>> end_positions = torch.tensor([3])
>>> outputs = model(input_ids, start_positions=start_positions, end_positions=end_positions)
>>> loss = outputs.loss
```"""
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
transformer_outputs = self.transformer(
input_ids,
attention_mask=attention_mask,
mems=mems,
perm_mask=perm_mask,
target_mapping=target_mapping,
token_type_ids=token_type_ids,
input_mask=input_mask,
head_mask=head_mask,
inputs_embeds=inputs_embeds,
use_mems=use_mems,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
**kwargs,
)
hidden_states = transformer_outputs[0]
start_logits = self.start_logits(hidden_states, p_mask=p_mask)
outputs = transformer_outputs[1:] # Keep mems, hidden states, attentions if there are in it
if start_positions is not None and end_positions is not None:
# If we are on multi-GPU, let's remove the dimension added by batch splitting
for x in (start_positions, end_positions, cls_index, is_impossible):
if x is not None and x.dim() > 1:
x.squeeze_(-1)
# during training, compute the end logits based on the ground truth of the start position
end_logits = self.end_logits(hidden_states, start_positions=start_positions, p_mask=p_mask)
loss_fct = CrossEntropyLoss()
start_loss = loss_fct(start_logits, start_positions)
end_loss = loss_fct(end_logits, end_positions)
total_loss = (start_loss + end_loss) / 2
if cls_index is not None and is_impossible is not None:
# Predict answerability from the representation of CLS and START
cls_logits = self.answer_class(hidden_states, start_positions=start_positions, cls_index=cls_index)
loss_fct_cls = nn.BCEWithLogitsLoss()
cls_loss = loss_fct_cls(cls_logits, is_impossible)
# note(zhiliny): by default multiply the loss by 0.5 so that the scale is comparable to start_loss and end_loss
total_loss += cls_loss * 0.5
if not return_dict:
return (total_loss,) + transformer_outputs[1:]
else:
return XLNetForQuestionAnsweringOutput(
loss=total_loss,
mems=transformer_outputs.mems,
hidden_states=transformer_outputs.hidden_states,
attentions=transformer_outputs.attentions,
)
else:
# during inference, compute the end logits based on beam search
bsz, slen, hsz = hidden_states.size()
start_log_probs = nn.functional.softmax(start_logits, dim=-1) # shape (bsz, slen)
start_top_log_probs, start_top_index = torch.topk(
start_log_probs, self.start_n_top, dim=-1
) # shape (bsz, start_n_top)
start_top_index_exp = start_top_index.unsqueeze(-1).expand(-1, -1, hsz) # shape (bsz, start_n_top, hsz)
start_states = torch.gather(hidden_states, -2, start_top_index_exp) # shape (bsz, start_n_top, hsz)
start_states = start_states.unsqueeze(1).expand(-1, slen, -1, -1) # shape (bsz, slen, start_n_top, hsz)
hidden_states_expanded = hidden_states.unsqueeze(2).expand_as(
start_states
) # shape (bsz, slen, start_n_top, hsz)
p_mask = p_mask.unsqueeze(-1) if p_mask is not None else None
end_logits = self.end_logits(hidden_states_expanded, start_states=start_states, p_mask=p_mask)
end_log_probs = nn.functional.softmax(end_logits, dim=1) # shape (bsz, slen, start_n_top)
end_top_log_probs, end_top_index = torch.topk(
end_log_probs, self.end_n_top, dim=1
) # shape (bsz, end_n_top, start_n_top)
end_top_log_probs = end_top_log_probs.view(-1, self.start_n_top * self.end_n_top)
end_top_index = end_top_index.view(-1, self.start_n_top * self.end_n_top)
start_states = torch.einsum(
"blh,bl->bh", hidden_states, start_log_probs
) # get the representation of START as weighted sum of hidden states
cls_logits = self.answer_class(
hidden_states, start_states=start_states, cls_index=cls_index
) # Shape (batch size,): one single `cls_logits` for each sample
if not return_dict:
outputs = (start_top_log_probs, start_top_index, end_top_log_probs, end_top_index, cls_logits)
return outputs + transformer_outputs[1:]
else:
return XLNetForQuestionAnsweringOutput(
start_top_log_probs=start_top_log_probs,
start_top_index=start_top_index,
end_top_log_probs=end_top_log_probs,
end_top_index=end_top_index,
cls_logits=cls_logits,
mems=transformer_outputs.mems,
hidden_states=transformer_outputs.hidden_states,
attentions=transformer_outputs.attentions,
)
| 92,846 | 43.488261 | 189 | py |
transformers | transformers-main/src/transformers/models/donut/modeling_donut_swin.py | # coding=utf-8
# Copyright 2022 The HuggingFace Inc. team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
""" PyTorch Donut Swin Transformer model.
This implementation is identical to a regular Swin Transformer, without final layer norm on top of the final hidden
states."""
import collections.abc
import math
from dataclasses import dataclass
from typing import Optional, Tuple, Union
import torch
import torch.utils.checkpoint
from torch import nn
from ...activations import ACT2FN
from ...modeling_utils import PreTrainedModel
from ...pytorch_utils import find_pruneable_heads_and_indices, meshgrid, prune_linear_layer
from ...utils import (
ModelOutput,
add_code_sample_docstrings,
add_start_docstrings,
add_start_docstrings_to_model_forward,
logging,
)
from .configuration_donut_swin import DonutSwinConfig
logger = logging.get_logger(__name__)
# General docstring
_CONFIG_FOR_DOC = "DonutSwinConfig"
# Base docstring
_CHECKPOINT_FOR_DOC = "https://huggingface.co/naver-clova-ix/donut-base"
_EXPECTED_OUTPUT_SHAPE = [1, 49, 768]
DONUT_SWIN_PRETRAINED_MODEL_ARCHIVE_LIST = [
"naver-clova-ix/donut-base",
# See all Donut Swin models at https://huggingface.co/models?filter=donut
]
@dataclass
# Copied from transformers.models.swin.modeling_swin.SwinEncoderOutput with Swin->DonutSwin
class DonutSwinEncoderOutput(ModelOutput):
"""
DonutSwin encoder's outputs, with potential hidden states and attentions.
Args:
last_hidden_state (`torch.FloatTensor` of shape `(batch_size, sequence_length, hidden_size)`):
Sequence of hidden-states at the output of the last layer of the model.
hidden_states (`tuple(torch.FloatTensor)`, *optional*, returned when `output_hidden_states=True` is passed or when `config.output_hidden_states=True`):
Tuple of `torch.FloatTensor` (one for the output of the embeddings + one for the output of each stage) of
shape `(batch_size, sequence_length, hidden_size)`.
Hidden-states of the model at the output of each layer plus the initial embedding outputs.
attentions (`tuple(torch.FloatTensor)`, *optional*, returned when `output_attentions=True` is passed or when `config.output_attentions=True`):
Tuple of `torch.FloatTensor` (one for each stage) of shape `(batch_size, num_heads, sequence_length,
sequence_length)`.
Attentions weights after the attention softmax, used to compute the weighted average in the self-attention
heads.
reshaped_hidden_states (`tuple(torch.FloatTensor)`, *optional*, returned when `output_hidden_states=True` is passed or when `config.output_hidden_states=True`):
Tuple of `torch.FloatTensor` (one for the output of the embeddings + one for the output of each stage) of
shape `(batch_size, hidden_size, height, width)`.
Hidden-states of the model at the output of each layer plus the initial embedding outputs reshaped to
include the spatial dimensions.
"""
last_hidden_state: torch.FloatTensor = None
hidden_states: Optional[Tuple[torch.FloatTensor]] = None
attentions: Optional[Tuple[torch.FloatTensor]] = None
reshaped_hidden_states: Optional[Tuple[torch.FloatTensor]] = None
@dataclass
# Copied from transformers.models.swin.modeling_swin.SwinModelOutput with Swin->DonutSwin
class DonutSwinModelOutput(ModelOutput):
"""
DonutSwin model's outputs that also contains a pooling of the last hidden states.
Args:
last_hidden_state (`torch.FloatTensor` of shape `(batch_size, sequence_length, hidden_size)`):
Sequence of hidden-states at the output of the last layer of the model.
pooler_output (`torch.FloatTensor` of shape `(batch_size, hidden_size)`, *optional*, returned when `add_pooling_layer=True` is passed):
Average pooling of the last layer hidden-state.
hidden_states (`tuple(torch.FloatTensor)`, *optional*, returned when `output_hidden_states=True` is passed or when `config.output_hidden_states=True`):
Tuple of `torch.FloatTensor` (one for the output of the embeddings + one for the output of each stage) of
shape `(batch_size, sequence_length, hidden_size)`.
Hidden-states of the model at the output of each layer plus the initial embedding outputs.
attentions (`tuple(torch.FloatTensor)`, *optional*, returned when `output_attentions=True` is passed or when `config.output_attentions=True`):
Tuple of `torch.FloatTensor` (one for each stage) of shape `(batch_size, num_heads, sequence_length,
sequence_length)`.
Attentions weights after the attention softmax, used to compute the weighted average in the self-attention
heads.
reshaped_hidden_states (`tuple(torch.FloatTensor)`, *optional*, returned when `output_hidden_states=True` is passed or when `config.output_hidden_states=True`):
Tuple of `torch.FloatTensor` (one for the output of the embeddings + one for the output of each stage) of
shape `(batch_size, hidden_size, height, width)`.
Hidden-states of the model at the output of each layer plus the initial embedding outputs reshaped to
include the spatial dimensions.
"""
last_hidden_state: torch.FloatTensor = None
pooler_output: Optional[torch.FloatTensor] = None
hidden_states: Optional[Tuple[torch.FloatTensor]] = None
attentions: Optional[Tuple[torch.FloatTensor]] = None
reshaped_hidden_states: Optional[Tuple[torch.FloatTensor]] = None
# Copied from transformers.models.swin.modeling_swin.window_partition
def window_partition(input_feature, window_size):
"""
Partitions the given input into windows.
"""
batch_size, height, width, num_channels = input_feature.shape
input_feature = input_feature.view(
batch_size, height // window_size, window_size, width // window_size, window_size, num_channels
)
windows = input_feature.permute(0, 1, 3, 2, 4, 5).contiguous().view(-1, window_size, window_size, num_channels)
return windows
# Copied from transformers.models.swin.modeling_swin.window_reverse
def window_reverse(windows, window_size, height, width):
"""
Merges windows to produce higher resolution features.
"""
num_channels = windows.shape[-1]
windows = windows.view(-1, height // window_size, width // window_size, window_size, window_size, num_channels)
windows = windows.permute(0, 1, 3, 2, 4, 5).contiguous().view(-1, height, width, num_channels)
return windows
# Copied from transformers.models.swin.modeling_swin.SwinEmbeddings with Swin->DonutSwin
class DonutSwinEmbeddings(nn.Module):
"""
Construct the patch and position embeddings. Optionally, also the mask token.
"""
def __init__(self, config, use_mask_token=False):
super().__init__()
self.patch_embeddings = DonutSwinPatchEmbeddings(config)
num_patches = self.patch_embeddings.num_patches
self.patch_grid = self.patch_embeddings.grid_size
self.mask_token = nn.Parameter(torch.zeros(1, 1, config.embed_dim)) if use_mask_token else None
if config.use_absolute_embeddings:
self.position_embeddings = nn.Parameter(torch.zeros(1, num_patches + 1, config.embed_dim))
else:
self.position_embeddings = None
self.norm = nn.LayerNorm(config.embed_dim)
self.dropout = nn.Dropout(config.hidden_dropout_prob)
def forward(
self, pixel_values: Optional[torch.FloatTensor], bool_masked_pos: Optional[torch.BoolTensor] = None
) -> Tuple[torch.Tensor]:
embeddings, output_dimensions = self.patch_embeddings(pixel_values)
embeddings = self.norm(embeddings)
batch_size, seq_len, _ = embeddings.size()
if bool_masked_pos is not None:
mask_tokens = self.mask_token.expand(batch_size, seq_len, -1)
# replace the masked visual tokens by mask_tokens
mask = bool_masked_pos.unsqueeze(-1).type_as(mask_tokens)
embeddings = embeddings * (1.0 - mask) + mask_tokens * mask
if self.position_embeddings is not None:
embeddings = embeddings + self.position_embeddings
embeddings = self.dropout(embeddings)
return embeddings, output_dimensions
# Copied from transformers.models.swin.modeling_swin.SwinPatchEmbeddings
class DonutSwinPatchEmbeddings(nn.Module):
"""
This class turns `pixel_values` of shape `(batch_size, num_channels, height, width)` into the initial
`hidden_states` (patch embeddings) of shape `(batch_size, seq_length, hidden_size)` to be consumed by a
Transformer.
"""
def __init__(self, config):
super().__init__()
image_size, patch_size = config.image_size, config.patch_size
num_channels, hidden_size = config.num_channels, config.embed_dim
image_size = image_size if isinstance(image_size, collections.abc.Iterable) else (image_size, image_size)
patch_size = patch_size if isinstance(patch_size, collections.abc.Iterable) else (patch_size, patch_size)
num_patches = (image_size[1] // patch_size[1]) * (image_size[0] // patch_size[0])
self.image_size = image_size
self.patch_size = patch_size
self.num_channels = num_channels
self.num_patches = num_patches
self.grid_size = (image_size[0] // patch_size[0], image_size[1] // patch_size[1])
self.projection = nn.Conv2d(num_channels, hidden_size, kernel_size=patch_size, stride=patch_size)
def maybe_pad(self, pixel_values, height, width):
if width % self.patch_size[1] != 0:
pad_values = (0, self.patch_size[1] - width % self.patch_size[1])
pixel_values = nn.functional.pad(pixel_values, pad_values)
if height % self.patch_size[0] != 0:
pad_values = (0, 0, 0, self.patch_size[0] - height % self.patch_size[0])
pixel_values = nn.functional.pad(pixel_values, pad_values)
return pixel_values
def forward(self, pixel_values: Optional[torch.FloatTensor]) -> Tuple[torch.Tensor, Tuple[int]]:
_, num_channels, height, width = pixel_values.shape
if num_channels != self.num_channels:
raise ValueError(
"Make sure that the channel dimension of the pixel values match with the one set in the configuration."
)
# pad the input to be divisible by self.patch_size, if needed
pixel_values = self.maybe_pad(pixel_values, height, width)
embeddings = self.projection(pixel_values)
_, _, height, width = embeddings.shape
output_dimensions = (height, width)
embeddings = embeddings.flatten(2).transpose(1, 2)
return embeddings, output_dimensions
# Copied from transformers.models.swin.modeling_swin.SwinPatchMerging
class DonutSwinPatchMerging(nn.Module):
"""
Patch Merging Layer.
Args:
input_resolution (`Tuple[int]`):
Resolution of input feature.
dim (`int`):
Number of input channels.
norm_layer (`nn.Module`, *optional*, defaults to `nn.LayerNorm`):
Normalization layer class.
"""
def __init__(self, input_resolution: Tuple[int], dim: int, norm_layer: nn.Module = nn.LayerNorm) -> None:
super().__init__()
self.input_resolution = input_resolution
self.dim = dim
self.reduction = nn.Linear(4 * dim, 2 * dim, bias=False)
self.norm = norm_layer(4 * dim)
def maybe_pad(self, input_feature, height, width):
should_pad = (height % 2 == 1) or (width % 2 == 1)
if should_pad:
pad_values = (0, 0, 0, width % 2, 0, height % 2)
input_feature = nn.functional.pad(input_feature, pad_values)
return input_feature
def forward(self, input_feature: torch.Tensor, input_dimensions: Tuple[int, int]) -> torch.Tensor:
height, width = input_dimensions
# `dim` is height * width
batch_size, dim, num_channels = input_feature.shape
input_feature = input_feature.view(batch_size, height, width, num_channels)
# pad input to be disible by width and height, if needed
input_feature = self.maybe_pad(input_feature, height, width)
# [batch_size, height/2, width/2, num_channels]
input_feature_0 = input_feature[:, 0::2, 0::2, :]
# [batch_size, height/2, width/2, num_channels]
input_feature_1 = input_feature[:, 1::2, 0::2, :]
# [batch_size, height/2, width/2, num_channels]
input_feature_2 = input_feature[:, 0::2, 1::2, :]
# [batch_size, height/2, width/2, num_channels]
input_feature_3 = input_feature[:, 1::2, 1::2, :]
# batch_size height/2 width/2 4*num_channels
input_feature = torch.cat([input_feature_0, input_feature_1, input_feature_2, input_feature_3], -1)
input_feature = input_feature.view(batch_size, -1, 4 * num_channels) # batch_size height/2*width/2 4*C
input_feature = self.norm(input_feature)
input_feature = self.reduction(input_feature)
return input_feature
# Copied from transformers.models.swin.modeling_swin.drop_path
def drop_path(input, drop_prob=0.0, training=False, scale_by_keep=True):
"""
Drop paths (Stochastic Depth) per sample (when applied in main path of residual blocks).
Comment by Ross Wightman: This is the same as the DropConnect impl I created for EfficientNet, etc networks,
however, the original name is misleading as 'Drop Connect' is a different form of dropout in a separate paper...
See discussion: https://github.com/tensorflow/tpu/issues/494#issuecomment-532968956 ... I've opted for changing the
layer and argument names to 'drop path' rather than mix DropConnect as a layer name and use 'survival rate' as the
argument.
"""
if drop_prob == 0.0 or not training:
return input
keep_prob = 1 - drop_prob
shape = (input.shape[0],) + (1,) * (input.ndim - 1) # work with diff dim tensors, not just 2D ConvNets
random_tensor = keep_prob + torch.rand(shape, dtype=input.dtype, device=input.device)
random_tensor.floor_() # binarize
output = input.div(keep_prob) * random_tensor
return output
# Copied from transformers.models.swin.modeling_swin.SwinDropPath
class DonutSwinDropPath(nn.Module):
"""Drop paths (Stochastic Depth) per sample (when applied in main path of residual blocks)."""
def __init__(self, drop_prob: Optional[float] = None) -> None:
super().__init__()
self.drop_prob = drop_prob
def forward(self, hidden_states: torch.Tensor) -> torch.Tensor:
return drop_path(hidden_states, self.drop_prob, self.training)
def extra_repr(self) -> str:
return "p={}".format(self.drop_prob)
# Copied from transformers.models.swin.modeling_swin.SwinSelfAttention with Swin->DonutSwin
class DonutSwinSelfAttention(nn.Module):
def __init__(self, config, dim, num_heads, window_size):
super().__init__()
if dim % num_heads != 0:
raise ValueError(
f"The hidden size ({dim}) is not a multiple of the number of attention heads ({num_heads})"
)
self.num_attention_heads = num_heads
self.attention_head_size = int(dim / num_heads)
self.all_head_size = self.num_attention_heads * self.attention_head_size
self.window_size = (
window_size if isinstance(window_size, collections.abc.Iterable) else (window_size, window_size)
)
self.relative_position_bias_table = nn.Parameter(
torch.zeros((2 * self.window_size[0] - 1) * (2 * self.window_size[1] - 1), num_heads)
)
# get pair-wise relative position index for each token inside the window
coords_h = torch.arange(self.window_size[0])
coords_w = torch.arange(self.window_size[1])
coords = torch.stack(meshgrid([coords_h, coords_w], indexing="ij"))
coords_flatten = torch.flatten(coords, 1)
relative_coords = coords_flatten[:, :, None] - coords_flatten[:, None, :]
relative_coords = relative_coords.permute(1, 2, 0).contiguous()
relative_coords[:, :, 0] += self.window_size[0] - 1
relative_coords[:, :, 1] += self.window_size[1] - 1
relative_coords[:, :, 0] *= 2 * self.window_size[1] - 1
relative_position_index = relative_coords.sum(-1)
self.register_buffer("relative_position_index", relative_position_index)
self.query = nn.Linear(self.all_head_size, self.all_head_size, bias=config.qkv_bias)
self.key = nn.Linear(self.all_head_size, self.all_head_size, bias=config.qkv_bias)
self.value = nn.Linear(self.all_head_size, self.all_head_size, bias=config.qkv_bias)
self.dropout = nn.Dropout(config.attention_probs_dropout_prob)
def transpose_for_scores(self, x):
new_x_shape = x.size()[:-1] + (self.num_attention_heads, self.attention_head_size)
x = x.view(new_x_shape)
return x.permute(0, 2, 1, 3)
def forward(
self,
hidden_states: torch.Tensor,
attention_mask: Optional[torch.FloatTensor] = None,
head_mask: Optional[torch.FloatTensor] = None,
output_attentions: Optional[bool] = False,
) -> Tuple[torch.Tensor]:
batch_size, dim, num_channels = hidden_states.shape
mixed_query_layer = self.query(hidden_states)
key_layer = self.transpose_for_scores(self.key(hidden_states))
value_layer = self.transpose_for_scores(self.value(hidden_states))
query_layer = self.transpose_for_scores(mixed_query_layer)
# Take the dot product between "query" and "key" to get the raw attention scores.
attention_scores = torch.matmul(query_layer, key_layer.transpose(-1, -2))
attention_scores = attention_scores / math.sqrt(self.attention_head_size)
relative_position_bias = self.relative_position_bias_table[self.relative_position_index.view(-1)]
relative_position_bias = relative_position_bias.view(
self.window_size[0] * self.window_size[1], self.window_size[0] * self.window_size[1], -1
)
relative_position_bias = relative_position_bias.permute(2, 0, 1).contiguous()
attention_scores = attention_scores + relative_position_bias.unsqueeze(0)
if attention_mask is not None:
# Apply the attention mask is (precomputed for all layers in DonutSwinModel forward() function)
mask_shape = attention_mask.shape[0]
attention_scores = attention_scores.view(
batch_size // mask_shape, mask_shape, self.num_attention_heads, dim, dim
)
attention_scores = attention_scores + attention_mask.unsqueeze(1).unsqueeze(0)
attention_scores = attention_scores.view(-1, self.num_attention_heads, dim, dim)
# Normalize the attention scores to probabilities.
attention_probs = nn.functional.softmax(attention_scores, dim=-1)
# This is actually dropping out entire tokens to attend to, which might
# seem a bit unusual, but is taken from the original Transformer paper.
attention_probs = self.dropout(attention_probs)
# Mask heads if we want to
if head_mask is not None:
attention_probs = attention_probs * head_mask
context_layer = torch.matmul(attention_probs, value_layer)
context_layer = context_layer.permute(0, 2, 1, 3).contiguous()
new_context_layer_shape = context_layer.size()[:-2] + (self.all_head_size,)
context_layer = context_layer.view(new_context_layer_shape)
outputs = (context_layer, attention_probs) if output_attentions else (context_layer,)
return outputs
# Copied from transformers.models.swin.modeling_swin.SwinSelfOutput
class DonutSwinSelfOutput(nn.Module):
def __init__(self, config, dim):
super().__init__()
self.dense = nn.Linear(dim, dim)
self.dropout = nn.Dropout(config.attention_probs_dropout_prob)
def forward(self, hidden_states: torch.Tensor, input_tensor: torch.Tensor) -> torch.Tensor:
hidden_states = self.dense(hidden_states)
hidden_states = self.dropout(hidden_states)
return hidden_states
# Copied from transformers.models.swin.modeling_swin.SwinAttention with Swin->DonutSwin
class DonutSwinAttention(nn.Module):
def __init__(self, config, dim, num_heads, window_size):
super().__init__()
self.self = DonutSwinSelfAttention(config, dim, num_heads, window_size)
self.output = DonutSwinSelfOutput(config, dim)
self.pruned_heads = set()
def prune_heads(self, heads):
if len(heads) == 0:
return
heads, index = find_pruneable_heads_and_indices(
heads, self.self.num_attention_heads, self.self.attention_head_size, self.pruned_heads
)
# Prune linear layers
self.self.query = prune_linear_layer(self.self.query, index)
self.self.key = prune_linear_layer(self.self.key, index)
self.self.value = prune_linear_layer(self.self.value, index)
self.output.dense = prune_linear_layer(self.output.dense, index, dim=1)
# Update hyper params and store pruned heads
self.self.num_attention_heads = self.self.num_attention_heads - len(heads)
self.self.all_head_size = self.self.attention_head_size * self.self.num_attention_heads
self.pruned_heads = self.pruned_heads.union(heads)
def forward(
self,
hidden_states: torch.Tensor,
attention_mask: Optional[torch.FloatTensor] = None,
head_mask: Optional[torch.FloatTensor] = None,
output_attentions: Optional[bool] = False,
) -> Tuple[torch.Tensor]:
self_outputs = self.self(hidden_states, attention_mask, head_mask, output_attentions)
attention_output = self.output(self_outputs[0], hidden_states)
outputs = (attention_output,) + self_outputs[1:] # add attentions if we output them
return outputs
# Copied from transformers.models.swin.modeling_swin.SwinIntermediate
class DonutSwinIntermediate(nn.Module):
def __init__(self, config, dim):
super().__init__()
self.dense = nn.Linear(dim, int(config.mlp_ratio * dim))
if isinstance(config.hidden_act, str):
self.intermediate_act_fn = ACT2FN[config.hidden_act]
else:
self.intermediate_act_fn = config.hidden_act
def forward(self, hidden_states: torch.Tensor) -> torch.Tensor:
hidden_states = self.dense(hidden_states)
hidden_states = self.intermediate_act_fn(hidden_states)
return hidden_states
# Copied from transformers.models.swin.modeling_swin.SwinOutput
class DonutSwinOutput(nn.Module):
def __init__(self, config, dim):
super().__init__()
self.dense = nn.Linear(int(config.mlp_ratio * dim), dim)
self.dropout = nn.Dropout(config.hidden_dropout_prob)
def forward(self, hidden_states: torch.Tensor) -> torch.Tensor:
hidden_states = self.dense(hidden_states)
hidden_states = self.dropout(hidden_states)
return hidden_states
# Copied from transformers.models.swin.modeling_swin.SwinLayer with Swin->DonutSwin
class DonutSwinLayer(nn.Module):
def __init__(self, config, dim, input_resolution, num_heads, shift_size=0):
super().__init__()
self.chunk_size_feed_forward = config.chunk_size_feed_forward
self.shift_size = shift_size
self.window_size = config.window_size
self.input_resolution = input_resolution
self.layernorm_before = nn.LayerNorm(dim, eps=config.layer_norm_eps)
self.attention = DonutSwinAttention(config, dim, num_heads, window_size=self.window_size)
self.drop_path = DonutSwinDropPath(config.drop_path_rate) if config.drop_path_rate > 0.0 else nn.Identity()
self.layernorm_after = nn.LayerNorm(dim, eps=config.layer_norm_eps)
self.intermediate = DonutSwinIntermediate(config, dim)
self.output = DonutSwinOutput(config, dim)
def set_shift_and_window_size(self, input_resolution):
if min(input_resolution) <= self.window_size:
# if window size is larger than input resolution, we don't partition windows
self.shift_size = 0
self.window_size = min(input_resolution)
def get_attn_mask(self, height, width, dtype):
if self.shift_size > 0:
# calculate attention mask for SW-MSA
img_mask = torch.zeros((1, height, width, 1), dtype=dtype)
height_slices = (
slice(0, -self.window_size),
slice(-self.window_size, -self.shift_size),
slice(-self.shift_size, None),
)
width_slices = (
slice(0, -self.window_size),
slice(-self.window_size, -self.shift_size),
slice(-self.shift_size, None),
)
count = 0
for height_slice in height_slices:
for width_slice in width_slices:
img_mask[:, height_slice, width_slice, :] = count
count += 1
mask_windows = window_partition(img_mask, self.window_size)
mask_windows = mask_windows.view(-1, self.window_size * self.window_size)
attn_mask = mask_windows.unsqueeze(1) - mask_windows.unsqueeze(2)
attn_mask = attn_mask.masked_fill(attn_mask != 0, float(-100.0)).masked_fill(attn_mask == 0, float(0.0))
else:
attn_mask = None
return attn_mask
def maybe_pad(self, hidden_states, height, width):
pad_right = (self.window_size - width % self.window_size) % self.window_size
pad_bottom = (self.window_size - height % self.window_size) % self.window_size
pad_values = (0, 0, 0, pad_right, 0, pad_bottom)
hidden_states = nn.functional.pad(hidden_states, pad_values)
return hidden_states, pad_values
def forward(
self,
hidden_states: torch.Tensor,
input_dimensions: Tuple[int, int],
head_mask: Optional[torch.FloatTensor] = None,
output_attentions: Optional[bool] = False,
always_partition: Optional[bool] = False,
) -> Tuple[torch.Tensor, torch.Tensor]:
if not always_partition:
self.set_shift_and_window_size(input_dimensions)
else:
pass
height, width = input_dimensions
batch_size, _, channels = hidden_states.size()
shortcut = hidden_states
hidden_states = self.layernorm_before(hidden_states)
hidden_states = hidden_states.view(batch_size, height, width, channels)
# pad hidden_states to multiples of window size
hidden_states, pad_values = self.maybe_pad(hidden_states, height, width)
_, height_pad, width_pad, _ = hidden_states.shape
# cyclic shift
if self.shift_size > 0:
shifted_hidden_states = torch.roll(hidden_states, shifts=(-self.shift_size, -self.shift_size), dims=(1, 2))
else:
shifted_hidden_states = hidden_states
# partition windows
hidden_states_windows = window_partition(shifted_hidden_states, self.window_size)
hidden_states_windows = hidden_states_windows.view(-1, self.window_size * self.window_size, channels)
attn_mask = self.get_attn_mask(height_pad, width_pad, dtype=hidden_states.dtype)
if attn_mask is not None:
attn_mask = attn_mask.to(hidden_states_windows.device)
attention_outputs = self.attention(
hidden_states_windows, attn_mask, head_mask, output_attentions=output_attentions
)
attention_output = attention_outputs[0]
attention_windows = attention_output.view(-1, self.window_size, self.window_size, channels)
shifted_windows = window_reverse(attention_windows, self.window_size, height_pad, width_pad)
# reverse cyclic shift
if self.shift_size > 0:
attention_windows = torch.roll(shifted_windows, shifts=(self.shift_size, self.shift_size), dims=(1, 2))
else:
attention_windows = shifted_windows
was_padded = pad_values[3] > 0 or pad_values[5] > 0
if was_padded:
attention_windows = attention_windows[:, :height, :width, :].contiguous()
attention_windows = attention_windows.view(batch_size, height * width, channels)
hidden_states = shortcut + self.drop_path(attention_windows)
layer_output = self.layernorm_after(hidden_states)
layer_output = self.intermediate(layer_output)
layer_output = hidden_states + self.output(layer_output)
layer_outputs = (layer_output, attention_outputs[1]) if output_attentions else (layer_output,)
return layer_outputs
# Copied from transformers.models.swin.modeling_swin.SwinStage with Swin->DonutSwin
class DonutSwinStage(nn.Module):
def __init__(self, config, dim, input_resolution, depth, num_heads, drop_path, downsample):
super().__init__()
self.config = config
self.dim = dim
self.blocks = nn.ModuleList(
[
DonutSwinLayer(
config=config,
dim=dim,
input_resolution=input_resolution,
num_heads=num_heads,
shift_size=0 if (i % 2 == 0) else config.window_size // 2,
)
for i in range(depth)
]
)
# patch merging layer
if downsample is not None:
self.downsample = downsample(input_resolution, dim=dim, norm_layer=nn.LayerNorm)
else:
self.downsample = None
self.pointing = False
def forward(
self,
hidden_states: torch.Tensor,
input_dimensions: Tuple[int, int],
head_mask: Optional[torch.FloatTensor] = None,
output_attentions: Optional[bool] = False,
always_partition: Optional[bool] = False,
) -> Tuple[torch.Tensor]:
height, width = input_dimensions
for i, layer_module in enumerate(self.blocks):
layer_head_mask = head_mask[i] if head_mask is not None else None
layer_outputs = layer_module(
hidden_states, input_dimensions, layer_head_mask, output_attentions, always_partition
)
hidden_states = layer_outputs[0]
hidden_states_before_downsampling = hidden_states
if self.downsample is not None:
height_downsampled, width_downsampled = (height + 1) // 2, (width + 1) // 2
output_dimensions = (height, width, height_downsampled, width_downsampled)
hidden_states = self.downsample(hidden_states_before_downsampling, input_dimensions)
else:
output_dimensions = (height, width, height, width)
stage_outputs = (hidden_states, hidden_states_before_downsampling, output_dimensions)
if output_attentions:
stage_outputs += layer_outputs[1:]
return stage_outputs
# Copied from transformers.models.swin.modeling_swin.SwinEncoder with Swin->DonutSwin
class DonutSwinEncoder(nn.Module):
def __init__(self, config, grid_size):
super().__init__()
self.num_layers = len(config.depths)
self.config = config
dpr = [x.item() for x in torch.linspace(0, config.drop_path_rate, sum(config.depths))]
self.layers = nn.ModuleList(
[
DonutSwinStage(
config=config,
dim=int(config.embed_dim * 2**i_layer),
input_resolution=(grid_size[0] // (2**i_layer), grid_size[1] // (2**i_layer)),
depth=config.depths[i_layer],
num_heads=config.num_heads[i_layer],
drop_path=dpr[sum(config.depths[:i_layer]) : sum(config.depths[: i_layer + 1])],
downsample=DonutSwinPatchMerging if (i_layer < self.num_layers - 1) else None,
)
for i_layer in range(self.num_layers)
]
)
self.gradient_checkpointing = False
def forward(
self,
hidden_states: torch.Tensor,
input_dimensions: Tuple[int, int],
head_mask: Optional[torch.FloatTensor] = None,
output_attentions: Optional[bool] = False,
output_hidden_states: Optional[bool] = False,
output_hidden_states_before_downsampling: Optional[bool] = False,
always_partition: Optional[bool] = False,
return_dict: Optional[bool] = True,
) -> Union[Tuple, DonutSwinEncoderOutput]:
all_hidden_states = () if output_hidden_states else None
all_reshaped_hidden_states = () if output_hidden_states else None
all_self_attentions = () if output_attentions else None
if output_hidden_states:
batch_size, _, hidden_size = hidden_states.shape
# rearrange b (h w) c -> b c h w
reshaped_hidden_state = hidden_states.view(batch_size, *input_dimensions, hidden_size)
reshaped_hidden_state = reshaped_hidden_state.permute(0, 3, 1, 2)
all_hidden_states += (hidden_states,)
all_reshaped_hidden_states += (reshaped_hidden_state,)
for i, layer_module in enumerate(self.layers):
layer_head_mask = head_mask[i] if head_mask is not None else None
if self.gradient_checkpointing and self.training:
def create_custom_forward(module):
def custom_forward(*inputs):
return module(*inputs, output_attentions)
return custom_forward
layer_outputs = torch.utils.checkpoint.checkpoint(
create_custom_forward(layer_module), hidden_states, input_dimensions, layer_head_mask
)
else:
layer_outputs = layer_module(
hidden_states, input_dimensions, layer_head_mask, output_attentions, always_partition
)
hidden_states = layer_outputs[0]
hidden_states_before_downsampling = layer_outputs[1]
output_dimensions = layer_outputs[2]
input_dimensions = (output_dimensions[-2], output_dimensions[-1])
if output_hidden_states and output_hidden_states_before_downsampling:
batch_size, _, hidden_size = hidden_states_before_downsampling.shape
# rearrange b (h w) c -> b c h w
# here we use the original (not downsampled) height and width
reshaped_hidden_state = hidden_states_before_downsampling.view(
batch_size, *(output_dimensions[0], output_dimensions[1]), hidden_size
)
reshaped_hidden_state = reshaped_hidden_state.permute(0, 3, 1, 2)
all_hidden_states += (hidden_states_before_downsampling,)
all_reshaped_hidden_states += (reshaped_hidden_state,)
elif output_hidden_states and not output_hidden_states_before_downsampling:
batch_size, _, hidden_size = hidden_states.shape
# rearrange b (h w) c -> b c h w
reshaped_hidden_state = hidden_states.view(batch_size, *input_dimensions, hidden_size)
reshaped_hidden_state = reshaped_hidden_state.permute(0, 3, 1, 2)
all_hidden_states += (hidden_states,)
all_reshaped_hidden_states += (reshaped_hidden_state,)
if output_attentions:
all_self_attentions += layer_outputs[3:]
if not return_dict:
return tuple(v for v in [hidden_states, all_hidden_states, all_self_attentions] if v is not None)
return DonutSwinEncoderOutput(
last_hidden_state=hidden_states,
hidden_states=all_hidden_states,
attentions=all_self_attentions,
reshaped_hidden_states=all_reshaped_hidden_states,
)
# Copied from transformers.models.swin.modeling_swin.SwinPreTrainedModel with Swin->DonutSwin
class DonutSwinPreTrainedModel(PreTrainedModel):
"""
An abstract class to handle weights initialization and a simple interface for downloading and loading pretrained
models.
"""
config_class = DonutSwinConfig
base_model_prefix = "swin"
main_input_name = "pixel_values"
supports_gradient_checkpointing = True
def _init_weights(self, module):
"""Initialize the weights"""
if isinstance(module, (nn.Linear, nn.Conv2d)):
# Slightly different from the TF version which uses truncated_normal for initialization
# cf https://github.com/pytorch/pytorch/pull/5617
module.weight.data.normal_(mean=0.0, std=self.config.initializer_range)
if module.bias is not None:
module.bias.data.zero_()
elif isinstance(module, nn.LayerNorm):
module.bias.data.zero_()
module.weight.data.fill_(1.0)
def _set_gradient_checkpointing(self, module, value=False):
if isinstance(module, DonutSwinEncoder):
module.gradient_checkpointing = value
SWIN_START_DOCSTRING = r"""
This model is a PyTorch [torch.nn.Module](https://pytorch.org/docs/stable/nn.html#torch.nn.Module) sub-class. Use
it as a regular PyTorch Module and refer to the PyTorch documentation for all matter related to general usage and
behavior.
Parameters:
config ([`DonutSwinConfig`]): Model configuration class with all the parameters of the model.
Initializing with a config file does not load the weights associated with the model, only the
configuration. Check out the [`~PreTrainedModel.from_pretrained`] method to load the model weights.
"""
SWIN_INPUTS_DOCSTRING = r"""
Args:
pixel_values (`torch.FloatTensor` of shape `(batch_size, num_channels, height, width)`):
Pixel values. Pixel values can be obtained using [`AutoImageProcessor`]. See
[`DonutImageProcessor.__call__`] for details.
head_mask (`torch.FloatTensor` of shape `(num_heads,)` or `(num_layers, num_heads)`, *optional*):
Mask to nullify selected heads of the self-attention modules. Mask values selected in `[0, 1]`:
- 1 indicates the head is **not masked**,
- 0 indicates the head is **masked**.
output_attentions (`bool`, *optional*):
Whether or not to return the attentions tensors of all attention layers. See `attentions` under returned
tensors for more detail.
output_hidden_states (`bool`, *optional*):
Whether or not to return the hidden states of all layers. See `hidden_states` under returned tensors for
more detail.
return_dict (`bool`, *optional*):
Whether or not to return a [`~utils.ModelOutput`] instead of a plain tuple.
"""
@add_start_docstrings(
"The bare Donut Swin Model transformer outputting raw hidden-states without any specific head on top.",
SWIN_START_DOCSTRING,
)
class DonutSwinModel(DonutSwinPreTrainedModel):
def __init__(self, config, add_pooling_layer=True, use_mask_token=False):
super().__init__(config)
self.config = config
self.num_layers = len(config.depths)
self.num_features = int(config.embed_dim * 2 ** (self.num_layers - 1))
self.embeddings = DonutSwinEmbeddings(config, use_mask_token=use_mask_token)
self.encoder = DonutSwinEncoder(config, self.embeddings.patch_grid)
self.pooler = nn.AdaptiveAvgPool1d(1) if add_pooling_layer else None
# Initialize weights and apply final processing
self.post_init()
def get_input_embeddings(self):
return self.embeddings.patch_embeddings
def _prune_heads(self, heads_to_prune):
"""
Prunes heads of the model. heads_to_prune: dict of {layer_num: list of heads to prune in this layer} See base
class PreTrainedModel
"""
for layer, heads in heads_to_prune.items():
self.encoder.layer[layer].attention.prune_heads(heads)
@add_start_docstrings_to_model_forward(SWIN_INPUTS_DOCSTRING)
@add_code_sample_docstrings(
checkpoint=_CHECKPOINT_FOR_DOC,
output_type=DonutSwinModelOutput,
config_class=_CONFIG_FOR_DOC,
modality="vision",
expected_output=_EXPECTED_OUTPUT_SHAPE,
)
def forward(
self,
pixel_values: Optional[torch.FloatTensor] = None,
bool_masked_pos: Optional[torch.BoolTensor] = None,
head_mask: Optional[torch.FloatTensor] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[Tuple, DonutSwinModelOutput]:
r"""
bool_masked_pos (`torch.BoolTensor` of shape `(batch_size, num_patches)`):
Boolean masked positions. Indicates which patches are masked (1) and which aren't (0).
"""
output_attentions = output_attentions if output_attentions is not None else self.config.output_attentions
output_hidden_states = (
output_hidden_states if output_hidden_states is not None else self.config.output_hidden_states
)
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
if pixel_values is None:
raise ValueError("You have to specify pixel_values")
# Prepare head mask if needed
# 1.0 in head_mask indicate we keep the head
# attention_probs has shape bsz x n_heads x N x N
# input head_mask has shape [num_heads] or [num_hidden_layers x num_heads]
# and head_mask is converted to shape [num_hidden_layers x batch x num_heads x seq_length x seq_length]
head_mask = self.get_head_mask(head_mask, len(self.config.depths))
embedding_output, input_dimensions = self.embeddings(pixel_values, bool_masked_pos=bool_masked_pos)
encoder_outputs = self.encoder(
embedding_output,
input_dimensions,
head_mask=head_mask,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
sequence_output = encoder_outputs[0]
pooled_output = None
if self.pooler is not None:
pooled_output = self.pooler(sequence_output.transpose(1, 2))
pooled_output = torch.flatten(pooled_output, 1)
if not return_dict:
output = (sequence_output, pooled_output) + encoder_outputs[1:]
return output
return DonutSwinModelOutput(
last_hidden_state=sequence_output,
pooler_output=pooled_output,
hidden_states=encoder_outputs.hidden_states,
attentions=encoder_outputs.attentions,
reshaped_hidden_states=encoder_outputs.reshaped_hidden_states,
)
| 43,709 | 44.342324 | 168 | py |
transformers | transformers-main/src/transformers/models/donut/convert_donut_to_pytorch.py | # coding=utf-8
# Copyright 2022 The HuggingFace Inc. team.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
"""Convert Donut checkpoints using the original `donut-python` library. URL: https://github.com/clovaai/donut"""
import argparse
import torch
from datasets import load_dataset
from donut import DonutModel
from transformers import (
DonutImageProcessor,
DonutProcessor,
DonutSwinConfig,
DonutSwinModel,
MBartConfig,
MBartForCausalLM,
VisionEncoderDecoderModel,
XLMRobertaTokenizerFast,
)
def get_configs(model):
original_config = model.config
encoder_config = DonutSwinConfig(
image_size=original_config.input_size,
patch_size=4,
depths=original_config.encoder_layer,
num_heads=[4, 8, 16, 32],
window_size=original_config.window_size,
embed_dim=128,
)
decoder_config = MBartConfig(
is_decoder=True,
is_encoder_decoder=False,
add_cross_attention=True,
decoder_layers=original_config.decoder_layer,
max_position_embeddings=original_config.max_position_embeddings,
vocab_size=len(
model.decoder.tokenizer
), # several special tokens are added to the vocab of XLMRobertaTokenizer, see repo on the hub (added_tokens.json)
scale_embedding=True,
add_final_layer_norm=True,
)
return encoder_config, decoder_config
def rename_key(name):
if "encoder.model" in name:
name = name.replace("encoder.model", "encoder")
if "decoder.model" in name:
name = name.replace("decoder.model", "decoder")
if "patch_embed.proj" in name:
name = name.replace("patch_embed.proj", "embeddings.patch_embeddings.projection")
if "patch_embed.norm" in name:
name = name.replace("patch_embed.norm", "embeddings.norm")
if name.startswith("encoder"):
if "layers" in name:
name = "encoder." + name
if "attn.proj" in name:
name = name.replace("attn.proj", "attention.output.dense")
if "attn" in name and "mask" not in name:
name = name.replace("attn", "attention.self")
if "norm1" in name:
name = name.replace("norm1", "layernorm_before")
if "norm2" in name:
name = name.replace("norm2", "layernorm_after")
if "mlp.fc1" in name:
name = name.replace("mlp.fc1", "intermediate.dense")
if "mlp.fc2" in name:
name = name.replace("mlp.fc2", "output.dense")
if name == "encoder.norm.weight":
name = "encoder.layernorm.weight"
if name == "encoder.norm.bias":
name = "encoder.layernorm.bias"
return name
def convert_state_dict(orig_state_dict, model):
for key in orig_state_dict.copy().keys():
val = orig_state_dict.pop(key)
if "qkv" in key:
key_split = key.split(".")
layer_num = int(key_split[3])
block_num = int(key_split[5])
dim = model.encoder.encoder.layers[layer_num].blocks[block_num].attention.self.all_head_size
if "weight" in key:
orig_state_dict[
f"encoder.encoder.layers.{layer_num}.blocks.{block_num}.attention.self.query.weight"
] = val[:dim, :]
orig_state_dict[
f"encoder.encoder.layers.{layer_num}.blocks.{block_num}.attention.self.key.weight"
] = val[dim : dim * 2, :]
orig_state_dict[
f"encoder.encoder.layers.{layer_num}.blocks.{block_num}.attention.self.value.weight"
] = val[-dim:, :]
else:
orig_state_dict[
f"encoder.encoder.layers.{layer_num}.blocks.{block_num}.attention.self.query.bias"
] = val[:dim]
orig_state_dict[
f"encoder.encoder.layers.{layer_num}.blocks.{block_num}.attention.self.key.bias"
] = val[dim : dim * 2]
orig_state_dict[
f"encoder.encoder.layers.{layer_num}.blocks.{block_num}.attention.self.value.bias"
] = val[-dim:]
elif "attn_mask" in key or key in ["encoder.model.norm.weight", "encoder.model.norm.bias"]:
# HuggingFace implementation doesn't use attn_mask buffer
# and model doesn't use final LayerNorms for the encoder
pass
else:
orig_state_dict[rename_key(key)] = val
return orig_state_dict
def convert_donut_checkpoint(model_name, pytorch_dump_folder_path=None, push_to_hub=False):
# load original model
original_model = DonutModel.from_pretrained(model_name).eval()
# load HuggingFace model
encoder_config, decoder_config = get_configs(original_model)
encoder = DonutSwinModel(encoder_config)
decoder = MBartForCausalLM(decoder_config)
model = VisionEncoderDecoderModel(encoder=encoder, decoder=decoder)
model.eval()
state_dict = original_model.state_dict()
new_state_dict = convert_state_dict(state_dict, model)
model.load_state_dict(new_state_dict)
# verify results on scanned document
dataset = load_dataset("hf-internal-testing/example-documents")
image = dataset["test"][0]["image"].convert("RGB")
tokenizer = XLMRobertaTokenizerFast.from_pretrained(model_name, from_slow=True)
image_processor = DonutImageProcessor(
do_align_long_axis=original_model.config.align_long_axis, size=original_model.config.input_size[::-1]
)
processor = DonutProcessor(image_processor, tokenizer)
pixel_values = processor(image, return_tensors="pt").pixel_values
if model_name == "naver-clova-ix/donut-base-finetuned-docvqa":
task_prompt = "<s_docvqa><s_question>{user_input}</s_question><s_answer>"
question = "When is the coffee break?"
task_prompt = task_prompt.replace("{user_input}", question)
elif model_name == "naver-clova-ix/donut-base-finetuned-rvlcdip":
task_prompt = "<s_rvlcdip>"
elif model_name in [
"naver-clova-ix/donut-base-finetuned-cord-v1",
"naver-clova-ix/donut-base-finetuned-cord-v1-2560",
]:
task_prompt = "<s_cord>"
elif model_name == "naver-clova-ix/donut-base-finetuned-cord-v2":
task_prompt = "s_cord-v2>"
elif model_name == "naver-clova-ix/donut-base-finetuned-zhtrainticket":
task_prompt = "<s_zhtrainticket>"
elif model_name in ["naver-clova-ix/donut-proto", "naver-clova-ix/donut-base"]:
# use a random prompt
task_prompt = "hello world"
else:
raise ValueError("Model name not supported")
prompt_tensors = original_model.decoder.tokenizer(task_prompt, add_special_tokens=False, return_tensors="pt")[
"input_ids"
]
original_patch_embed = original_model.encoder.model.patch_embed(pixel_values)
patch_embeddings, _ = model.encoder.embeddings(pixel_values)
assert torch.allclose(original_patch_embed, patch_embeddings, atol=1e-3)
# verify encoder hidden states
original_last_hidden_state = original_model.encoder(pixel_values)
last_hidden_state = model.encoder(pixel_values).last_hidden_state
assert torch.allclose(original_last_hidden_state, last_hidden_state, atol=1e-2)
# verify decoder hidden states
original_logits = original_model(pixel_values, prompt_tensors, None).logits
logits = model(pixel_values, decoder_input_ids=prompt_tensors).logits
assert torch.allclose(original_logits, logits, atol=1e-3)
print("Looks ok!")
if pytorch_dump_folder_path is not None:
print(f"Saving model and processor to {pytorch_dump_folder_path}")
model.save_pretrained(pytorch_dump_folder_path)
processor.save_pretrained(pytorch_dump_folder_path)
if push_to_hub:
model.push_to_hub("nielsr/" + model_name.split("/")[-1], commit_message="Update model")
processor.push_to_hub("nielsr/" + model_name.split("/")[-1], commit_message="Update model")
if __name__ == "__main__":
parser = argparse.ArgumentParser()
# Required parameters
parser.add_argument(
"--model_name",
default="naver-clova-ix/donut-base-finetuned-docvqa",
required=False,
type=str,
help="Name of the original model you'd like to convert.",
)
parser.add_argument(
"--pytorch_dump_folder_path",
default=None,
required=False,
type=str,
help="Path to the output PyTorch model directory.",
)
parser.add_argument(
"--push_to_hub",
action="store_true",
help="Whether or not to push the converted model and processor to the 🤗 hub.",
)
args = parser.parse_args()
convert_donut_checkpoint(args.model_name, args.pytorch_dump_folder_path, args.push_to_hub)
| 9,313 | 38.634043 | 123 | py |
transformers | transformers-main/src/transformers/models/donut/image_processing_donut.py | # coding=utf-8
# Copyright 2022 The HuggingFace Inc. team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
"""Image processor class for Donut."""
from typing import Dict, List, Optional, Union
import numpy as np
from ...image_processing_utils import BaseImageProcessor, BatchFeature, get_size_dict
from ...image_transforms import (
get_resize_output_image_size,
normalize,
pad,
rescale,
resize,
to_channel_dimension_format,
)
from ...image_utils import (
IMAGENET_STANDARD_MEAN,
IMAGENET_STANDARD_STD,
ChannelDimension,
ImageInput,
PILImageResampling,
get_image_size,
make_list_of_images,
to_numpy_array,
valid_images,
)
from ...utils import TensorType, logging
from ...utils.import_utils import is_vision_available
logger = logging.get_logger(__name__)
if is_vision_available():
import PIL
class DonutImageProcessor(BaseImageProcessor):
r"""
Constructs a Donut image processor.
Args:
do_resize (`bool`, *optional*, defaults to `True`):
Whether to resize the image's (height, width) dimensions to the specified `size`. Can be overridden by
`do_resize` in the `preprocess` method.
size (`Dict[str, int]` *optional*, defaults to `{"shortest_edge": 224}`):
Size of the image after resizing. The shortest edge of the image is resized to size["shortest_edge"], with
the longest edge resized to keep the input aspect ratio. Can be overridden by `size` in the `preprocess`
method.
resample (`PILImageResampling`, *optional*, defaults to `PILImageResampling.BILINEAR`):
Resampling filter to use if resizing the image. Can be overridden by `resample` in the `preprocess` method.
do_thumbnail (`bool`, *optional*, defaults to `True`):
Whether to resize the image using thumbnail method.
do_align_long_axis (`bool`, *optional*, defaults to `False`):
Whether to align the long axis of the image with the long axis of `size` by rotating by 90 degrees.
do_pad (`bool`, *optional*, defaults to `True`):
Whether to pad the image. If `random_padding` is set to `True` in `preprocess`, each image is padded with a
random amont of padding on each size, up to the largest image size in the batch. Otherwise, all images are
padded to the largest image size in the batch.
do_rescale (`bool`, *optional*, defaults to `True`):
Whether to rescale the image by the specified scale `rescale_factor`. Can be overridden by `do_rescale` in
the `preprocess` method.
rescale_factor (`int` or `float`, *optional*, defaults to `1/255`):
Scale factor to use if rescaling the image. Can be overridden by `rescale_factor` in the `preprocess`
method.
do_normalize:
Whether to normalize the image. Can be overridden by `do_normalize` in the `preprocess` method.
image_mean (`float` or `List[float]`, *optional*, defaults to `IMAGENET_STANDARD_MEAN`):
Mean to use if normalizing the image. This is a float or list of floats the length of the number of
channels in the image. Can be overridden by the `image_mean` parameter in the `preprocess` method.
image_std (`float` or `List[float]`, *optional*, defaults to `IMAGENET_STANDARD_STD`):
Image standard deviation.
"""
model_input_names = ["pixel_values"]
def __init__(
self,
do_resize: bool = True,
size: Dict[str, int] = None,
resample: PILImageResampling = PILImageResampling.BILINEAR,
do_thumbnail: bool = True,
do_align_long_axis: bool = False,
do_pad: bool = True,
do_rescale: bool = True,
rescale_factor: Union[int, float] = 1 / 255,
do_normalize: bool = True,
image_mean: Optional[Union[float, List[float]]] = None,
image_std: Optional[Union[float, List[float]]] = None,
**kwargs,
) -> None:
super().__init__(**kwargs)
size = size if size is not None else {"height": 2560, "width": 1920}
if isinstance(size, (tuple, list)):
# The previous feature extractor size parameter was in (width, height) format
size = size[::-1]
size = get_size_dict(size)
self.do_resize = do_resize
self.size = size
self.resample = resample
self.do_thumbnail = do_thumbnail
self.do_align_long_axis = do_align_long_axis
self.do_pad = do_pad
self.do_rescale = do_rescale
self.rescale_factor = rescale_factor
self.do_normalize = do_normalize
self.image_mean = image_mean if image_mean is not None else IMAGENET_STANDARD_MEAN
self.image_std = image_std if image_std is not None else IMAGENET_STANDARD_STD
def align_long_axis(
self, image: np.ndarray, size: Dict[str, int], data_format: Optional[Union[str, ChannelDimension]] = None
) -> np.ndarray:
"""
Align the long axis of the image to the longest axis of the specified size.
Args:
image (`np.ndarray`):
The image to be aligned.
size (`Dict[str, int]`):
The size `{"height": h, "width": w}` to align the long axis to.
Returns:
`np.ndarray`: The aligned image.
"""
input_height, input_width = get_image_size(image)
output_height, output_width = size["height"], size["width"]
if (output_width < output_height and input_width > input_height) or (
output_width > output_height and input_width < input_height
):
image = np.rot90(image, 3)
if data_format is not None:
image = to_channel_dimension_format(image, data_format)
return image
def pad_image(
self,
image: np.ndarray,
size: Dict[str, int],
random_padding: bool = False,
data_format: Optional[Union[str, ChannelDimension]] = None,
) -> np.ndarray:
"""
Pad the image to the specified size.
Args:
image (`np.ndarray`):
The image to be padded.
size (`Dict[str, int]`):
The size `{"height": h, "width": w}` to pad the image to.
random_padding (`bool`, *optional*, defaults to `False`):
Whether to use random padding or not.
data_format (`str` or `ChannelDimension`, *optional*):
The data format of the output image. If unset, the same format as the input image is used.
"""
output_height, output_width = size["height"], size["width"]
input_height, input_width = get_image_size(image)
delta_width = output_width - input_width
delta_height = output_height - input_height
if random_padding:
pad_top = np.random.randint(low=0, high=delta_height + 1)
pad_left = np.random.randint(low=0, high=delta_width + 1)
else:
pad_top = delta_height // 2
pad_left = delta_width // 2
pad_bottom = delta_height - pad_top
pad_right = delta_width - pad_left
padding = ((pad_top, pad_bottom), (pad_left, pad_right))
return pad(image, padding, data_format=data_format)
def pad(self, *args, **kwargs):
logger.info("pad is deprecated and will be removed in version 4.27. Please use pad_image instead.")
return self.pad_image(*args, **kwargs)
def thumbnail(
self,
image: np.ndarray,
size: Dict[str, int],
resample: PILImageResampling = PILImageResampling.BICUBIC,
data_format: Optional[Union[str, ChannelDimension]] = None,
**kwargs,
) -> np.ndarray:
"""
Resize the image to make a thumbnail. The image is resized so that no dimension is larger than any
corresponding dimension of the specified size.
Args:
image (`np.ndarray`):
The image to be resized.
size (`Dict[str, int]`):
The size `{"height": h, "width": w}` to resize the image to.
resample (`PILImageResampling`, *optional*, defaults to `PILImageResampling.BICUBIC`):
The resampling filter to use.
data_format (`Optional[Union[str, ChannelDimension]]`, *optional*):
The data format of the output image. If unset, the same format as the input image is used.
"""
input_height, input_width = get_image_size(image)
output_height, output_width = size["height"], size["width"]
# We always resize to the smallest of either the input or output size.
height = min(input_height, output_height)
width = min(input_width, output_width)
if height == input_height and width == input_width:
return image
if input_height > input_width:
width = int(input_width * height / input_height)
elif input_width > input_height:
height = int(input_height * width / input_width)
return resize(
image, size=(height, width), resample=resample, reducing_gap=2.0, data_format=data_format, **kwargs
)
def resize(
self,
image: np.ndarray,
size: Dict[str, int],
resample: PILImageResampling = PILImageResampling.BICUBIC,
data_format: Optional[Union[str, ChannelDimension]] = None,
**kwargs,
) -> np.ndarray:
"""
Resize an image. The shortest edge of the image is resized to size["shortest_edge"], with the longest edge
resized to keep the input aspect ratio.
Args:
image (`np.ndarray`):
Image to resize.
size (`Dict[str, int]`):
Size of the output image.
resample (`PILImageResampling`, *optional*, defaults to `PILImageResampling.BICUBIC`):
Resampling filter to use when resiizing the image.
data_format (`str` or `ChannelDimension`, *optional*):
The channel dimension format of the image. If not provided, it will be the same as the input image.
"""
size = get_size_dict(size)
shortest_edge = min(size["height"], size["width"])
output_size = get_resize_output_image_size(image, size=shortest_edge, default_to_square=False)
resized_image = resize(image, size=output_size, resample=resample, data_format=data_format, **kwargs)
return resized_image
def rescale(
self,
image: np.ndarray,
scale: Union[int, float],
data_format: Optional[Union[str, ChannelDimension]] = None,
**kwargs,
):
"""
Rescale an image by a scale factor. image = image * scale.
Args:
image (`np.ndarray`):
Image to rescale.
scale (`int` or `float`):
Scale to apply to the image.
data_format (`str` or `ChannelDimension`, *optional*):
The channel dimension format of the image. If not provided, it will be the same as the input image.
"""
return rescale(image, scale=scale, data_format=data_format, **kwargs)
def normalize(
self,
image: np.ndarray,
mean: Union[float, List[float]],
std: Union[float, List[float]],
data_format: Optional[Union[str, ChannelDimension]] = None,
**kwargs,
) -> np.ndarray:
"""
Normalize an image. image = (image - image_mean) / image_std.
Args:
image (`np.ndarray`):
Image to normalize.
image_mean (`float` or `List[float]`):
Image mean.
image_std (`float` or `List[float]`):
Image standard deviation.
data_format (`str` or `ChannelDimension`, *optional*):
The channel dimension format of the image. If not provided, it will be the same as the input image.
"""
return normalize(image, mean=mean, std=std, data_format=data_format, **kwargs)
def preprocess(
self,
images: ImageInput,
do_resize: bool = None,
size: Dict[str, int] = None,
resample: PILImageResampling = None,
do_thumbnail: bool = None,
do_align_long_axis: bool = None,
do_pad: bool = None,
random_padding: bool = False,
do_rescale: bool = None,
rescale_factor: float = None,
do_normalize: bool = None,
image_mean: Optional[Union[float, List[float]]] = None,
image_std: Optional[Union[float, List[float]]] = None,
return_tensors: Optional[Union[str, TensorType]] = None,
data_format: Optional[ChannelDimension] = ChannelDimension.FIRST,
**kwargs,
) -> PIL.Image.Image:
"""
Preprocess an image or batch of images.
Args:
images (`ImageInput`):
Image to preprocess.
do_resize (`bool`, *optional*, defaults to `self.do_resize`):
Whether to resize the image.
size (`Dict[str, int]`, *optional*, defaults to `self.size`):
Size of the image after resizing. Shortest edge of the image is resized to min(size["height"],
size["width"]) with the longest edge resized to keep the input aspect ratio.
resample (`int`, *optional*, defaults to `self.resample`):
Resampling filter to use if resizing the image. This can be one of the enum `PILImageResampling`. Only
has an effect if `do_resize` is set to `True`.
do_thumbnail (`bool`, *optional*, defaults to `self.do_thumbnail`):
Whether to resize the image using thumbnail method.
do_align_long_axis (`bool`, *optional*, defaults to `self.do_align_long_axis`):
Whether to align the long axis of the image with the long axis of `size` by rotating by 90 degrees.
do_pad (`bool`, *optional*, defaults to `self.do_pad`):
Whether to pad the image. If `random_padding` is set to `True`, each image is padded with a random
amont of padding on each size, up to the largest image size in the batch. Otherwise, all images are
padded to the largest image size in the batch.
random_padding (`bool`, *optional*, defaults to `self.random_padding`):
Whether to use random padding when padding the image. If `True`, each image in the batch with be padded
with a random amount of padding on each side up to the size of the largest image in the batch.
do_rescale (`bool`, *optional*, defaults to `self.do_rescale`):
Whether to rescale the image pixel values.
rescale_factor (`float`, *optional*, defaults to `self.rescale_factor`):
Rescale factor to rescale the image by if `do_rescale` is set to `True`.
do_normalize (`bool`, *optional*, defaults to `self.do_normalize`):
Whether to normalize the image.
image_mean (`float` or `List[float]`, *optional*, defaults to `self.image_mean`):
Image mean to use for normalization.
image_std (`float` or `List[float]`, *optional*, defaults to `self.image_std`):
Image standard deviation to use for normalization.
return_tensors (`str` or `TensorType`, *optional*):
The type of tensors to return. Can be one of:
- Unset: Return a list of `np.ndarray`.
- `TensorType.TENSORFLOW` or `'tf'`: Return a batch of type `tf.Tensor`.
- `TensorType.PYTORCH` or `'pt'`: Return a batch of type `torch.Tensor`.
- `TensorType.NUMPY` or `'np'`: Return a batch of type `np.ndarray`.
- `TensorType.JAX` or `'jax'`: Return a batch of type `jax.numpy.ndarray`.
data_format (`ChannelDimension` or `str`, *optional*, defaults to `ChannelDimension.FIRST`):
The channel dimension format for the output image. Can be one of:
- `ChannelDimension.FIRST`: image in (num_channels, height, width) format.
- `ChannelDimension.LAST`: image in (height, width, num_channels) format.
- Unset: defaults to the channel dimension format of the input image.
"""
do_resize = do_resize if do_resize is not None else self.do_resize
size = size if size is not None else self.size
if isinstance(size, (tuple, list)):
# Previous feature extractor had size in (width, height) format
size = size[::-1]
size = get_size_dict(size)
resample = resample if resample is not None else self.resample
do_thumbnail = do_thumbnail if do_thumbnail is not None else self.do_thumbnail
do_align_long_axis = do_align_long_axis if do_align_long_axis is not None else self.do_align_long_axis
do_pad = do_pad if do_pad is not None else self.do_pad
do_rescale = do_rescale if do_rescale is not None else self.do_rescale
rescale_factor = rescale_factor if rescale_factor is not None else self.rescale_factor
do_normalize = do_normalize if do_normalize is not None else self.do_normalize
image_mean = image_mean if image_mean is not None else self.image_mean
image_std = image_std if image_std is not None else self.image_std
images = make_list_of_images(images)
if not valid_images(images):
raise ValueError(
"Invalid image type. Must be of type PIL.Image.Image, numpy.ndarray, "
"torch.Tensor, tf.Tensor or jax.ndarray."
)
if do_resize and size is None:
raise ValueError("Size must be specified if do_resize is True.")
if do_rescale and rescale_factor is None:
raise ValueError("Rescale factor must be specified if do_rescale is True.")
if do_pad and size is None:
raise ValueError("Size must be specified if do_pad is True.")
if do_normalize and (image_mean is None or image_std is None):
raise ValueError("Image mean and std must be specified if do_normalize is True.")
# All transformations expect numpy arrays.
images = [to_numpy_array(image) for image in images]
if do_align_long_axis:
images = [self.align_long_axis(image, size=size) for image in images]
if do_resize:
images = [self.resize(image=image, size=size, resample=resample) for image in images]
if do_thumbnail:
images = [self.thumbnail(image=image, size=size) for image in images]
if do_pad:
images = [self.pad_image(image=image, size=size, random_padding=random_padding) for image in images]
if do_rescale:
images = [self.rescale(image=image, scale=rescale_factor) for image in images]
if do_normalize:
images = [self.normalize(image=image, mean=image_mean, std=image_std) for image in images]
images = [to_channel_dimension_format(image, data_format) for image in images]
data = {"pixel_values": images}
return BatchFeature(data=data, tensor_type=return_tensors)
| 19,857 | 44.441648 | 119 | py |
transformers | transformers-main/src/transformers/models/donut/__init__.py | # Copyright 2022 The HuggingFace Team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
from typing import TYPE_CHECKING
from ...utils import OptionalDependencyNotAvailable, _LazyModule, is_torch_available, is_vision_available
_import_structure = {
"configuration_donut_swin": ["DONUT_SWIN_PRETRAINED_CONFIG_ARCHIVE_MAP", "DonutSwinConfig"],
"processing_donut": ["DonutProcessor"],
}
try:
if not is_torch_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
_import_structure["modeling_donut_swin"] = [
"DONUT_SWIN_PRETRAINED_MODEL_ARCHIVE_LIST",
"DonutSwinModel",
"DonutSwinPreTrainedModel",
]
try:
if not is_vision_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
_import_structure["feature_extraction_donut"] = ["DonutFeatureExtractor"]
_import_structure["image_processing_donut"] = ["DonutImageProcessor"]
if TYPE_CHECKING:
from .configuration_donut_swin import DONUT_SWIN_PRETRAINED_CONFIG_ARCHIVE_MAP, DonutSwinConfig
from .processing_donut import DonutProcessor
try:
if not is_torch_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
from .modeling_donut_swin import (
DONUT_SWIN_PRETRAINED_MODEL_ARCHIVE_LIST,
DonutSwinModel,
DonutSwinPreTrainedModel,
)
try:
if not is_vision_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
from .feature_extraction_donut import DonutFeatureExtractor
from .image_processing_donut import DonutImageProcessor
else:
import sys
sys.modules[__name__] = _LazyModule(__name__, globals()["__file__"], _import_structure, module_spec=__spec__)
| 2,455 | 31.746667 | 113 | py |
transformers | transformers-main/src/transformers/models/time_series_transformer/modeling_time_series_transformer.py | # coding=utf-8
# Copyright 2022 The HuggingFace Inc. team. All rights reserved.
# Copyright 2018 Amazon.com, Inc. or its affiliates. All Rights Reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
""" PyTorch Time Series Transformer model."""
from typing import List, Optional, Tuple, Union
import numpy as np
import torch
from torch import nn
from ...activations import ACT2FN
from ...modeling_outputs import (
BaseModelOutput,
BaseModelOutputWithPastAndCrossAttentions,
SampleTSPredictionOutput,
Seq2SeqTSModelOutput,
Seq2SeqTSPredictionOutput,
)
from ...modeling_utils import PreTrainedModel
from ...time_series_utils import NegativeBinomialOutput, NormalOutput, StudentTOutput
from ...utils import add_start_docstrings, add_start_docstrings_to_model_forward, logging, replace_return_docstrings
from .configuration_time_series_transformer import TimeSeriesTransformerConfig
logger = logging.get_logger(__name__)
_CONFIG_FOR_DOC = "TimeSeriesTransformerConfig"
TIME_SERIES_TRANSFORMER_PRETRAINED_MODEL_ARCHIVE_LIST = [
"huggingface/time-series-transformer-tourism-monthly",
# See all TimeSeriesTransformer models at https://huggingface.co/models?filter=time_series_transformer
]
class TimeSeriesFeatureEmbedder(nn.Module):
"""
Embed a sequence of categorical features.
Args:
cardinalities (`list[int]`):
List of cardinalities of the categorical features.
embedding_dims (`list[int]`):
List of embedding dimensions of the categorical features.
"""
def __init__(self, cardinalities: List[int], embedding_dims: List[int]) -> None:
super().__init__()
self.num_features = len(cardinalities)
self.embedders = nn.ModuleList([nn.Embedding(c, d) for c, d in zip(cardinalities, embedding_dims)])
def forward(self, features: torch.Tensor) -> torch.Tensor:
if self.num_features > 1:
# we slice the last dimension, giving an array of length
# self.num_features with shape (N,T) or (N)
cat_feature_slices = torch.chunk(features, self.num_features, dim=-1)
else:
cat_feature_slices = [features]
return torch.cat(
[
embed(cat_feature_slice.squeeze(-1))
for embed, cat_feature_slice in zip(self.embedders, cat_feature_slices)
],
dim=-1,
)
class TimeSeriesStdScaler(nn.Module):
"""
Standardize features by calculating the mean and scaling along some given dimension `dim`, and then normalizes it
by subtracting from the mean and dividing by the standard deviation.
Args:
dim (`int`):
Dimension along which to calculate the mean and standard deviation.
keepdim (`bool`, *optional*, defaults to `False`):
Controls whether to retain dimension `dim` (of length 1) in the scale tensor, or suppress it.
minimum_scale (`float`, *optional*, defaults to 1e-5):
Default scale that is used for elements that are constantly zero along dimension `dim`.
"""
def __init__(self, dim: int, keepdim: bool = False, minimum_scale: float = 1e-5):
super().__init__()
if not dim > 0:
raise ValueError("Cannot compute scale along dim = 0 (batch dimension), please provide dim > 0")
self.dim = dim
self.keepdim = keepdim
self.minimum_scale = minimum_scale
@torch.no_grad()
def forward(self, data: torch.Tensor, weights: torch.Tensor) -> Tuple[torch.Tensor, torch.Tensor, torch.Tensor]:
denominator = weights.sum(self.dim, keepdim=self.keepdim)
denominator = denominator.clamp_min(1.0)
loc = (data * weights).sum(self.dim, keepdim=self.keepdim) / denominator
variance = (((data - loc) * weights) ** 2).sum(self.dim, keepdim=self.keepdim) / denominator
scale = torch.sqrt(variance + self.minimum_scale)
return (data - loc) / scale, loc, scale
class TimeSeriesMeanScaler(nn.Module):
"""
Computes a scaling factor as the weighted average absolute value along dimension `dim`, and scales the data
accordingly.
Args:
dim (`int`):
Dimension along which to compute the scale.
keepdim (`bool`, *optional*, defaults to `False`):
Controls whether to retain dimension `dim` (of length 1) in the scale tensor, or suppress it.
default_scale (`float`, *optional*, defaults to `None`):
Default scale that is used for elements that are constantly zero. If `None`, we use the scale of the batch.
minimum_scale (`float`, *optional*, defaults to 1e-10):
Default minimum possible scale that is used for any item.
"""
def __init__(
self, dim: int = -1, keepdim: bool = True, default_scale: Optional[float] = None, minimum_scale: float = 1e-10
):
super().__init__()
self.dim = dim
self.keepdim = keepdim
self.minimum_scale = minimum_scale
self.default_scale = default_scale
@torch.no_grad()
def forward(
self, data: torch.Tensor, observed_indicator: torch.Tensor
) -> Tuple[torch.Tensor, torch.Tensor, torch.Tensor]:
# shape: (N, [C], T=1)
ts_sum = (data * observed_indicator).abs().sum(self.dim, keepdim=True)
num_observed = observed_indicator.sum(self.dim, keepdim=True)
scale = ts_sum / torch.clamp(num_observed, min=1)
# If `default_scale` is provided, we use it, otherwise we use the scale
# of the batch.
if self.default_scale is None:
batch_sum = ts_sum.sum(dim=0)
batch_observations = torch.clamp(num_observed.sum(0), min=1)
default_scale = torch.squeeze(batch_sum / batch_observations)
else:
default_scale = self.default_scale * torch.ones_like(scale)
# apply default scale where there are no observations
scale = torch.where(num_observed > 0, scale, default_scale)
# ensure the scale is at least `self.minimum_scale`
scale = torch.clamp(scale, min=self.minimum_scale)
scaled_data = data / scale
if not self.keepdim:
scale = scale.squeeze(dim=self.dim)
return scaled_data, torch.zeros_like(scale), scale
class TimeSeriesNOPScaler(nn.Module):
"""
Assigns a scaling factor equal to 1 along dimension `dim`, and therefore applies no scaling to the input data.
Args:
dim (`int`):
Dimension along which to compute the scale.
keepdim (`bool`, *optional*, defaults to `False`):
Controls whether to retain dimension `dim` (of length 1) in the scale tensor, or suppress it.
"""
def __init__(self, dim: int, keepdim: bool = False):
super().__init__()
self.dim = dim
self.keepdim = keepdim
def forward(
self, data: torch.Tensor, observed_indicator: torch.Tensor
) -> Tuple[torch.Tensor, torch.Tensor, torch.Tensor]:
scale = torch.ones_like(data, requires_grad=False).mean(dim=self.dim, keepdim=self.keepdim)
loc = torch.zeros_like(data, requires_grad=False).mean(dim=self.dim, keepdim=self.keepdim)
return data, loc, scale
def nll(input: torch.distributions.Distribution, target: torch.Tensor) -> torch.Tensor:
"""
Computes the negative log likelihood loss from input distribution with respect to target.
"""
return -input.log_prob(target)
def weighted_average(input_tensor: torch.Tensor, weights: Optional[torch.Tensor] = None, dim=None) -> torch.Tensor:
"""
Computes the weighted average of a given tensor across a given `dim`, masking values associated with weight zero,
meaning instead of `nan * 0 = nan` you will get `0 * 0 = 0`.
Args:
input_tensor (`torch.FloatTensor`):
Input tensor, of which the average must be computed.
weights (`torch.FloatTensor`, *optional*):
Weights tensor, of the same shape as `input_tensor`.
dim (`int`, *optional*):
The dim along which to average `input_tensor`.
Returns:
`torch.FloatTensor`: The tensor with values averaged along the specified `dim`.
"""
if weights is not None:
weighted_tensor = torch.where(weights != 0, input_tensor * weights, torch.zeros_like(input_tensor))
sum_weights = torch.clamp(weights.sum(dim=dim) if dim else weights.sum(), min=1.0)
return (weighted_tensor.sum(dim=dim) if dim else weighted_tensor.sum()) / sum_weights
else:
return input_tensor.mean(dim=dim)
# Copied from transformers.models.bart.modeling_bart._make_causal_mask
def _make_causal_mask(
input_ids_shape: torch.Size, dtype: torch.dtype, device: torch.device, past_key_values_length: int = 0
):
"""
Make causal mask used for bi-directional self-attention.
"""
bsz, tgt_len = input_ids_shape
mask = torch.full((tgt_len, tgt_len), torch.finfo(dtype).min, device=device)
mask_cond = torch.arange(mask.size(-1), device=device)
mask.masked_fill_(mask_cond < (mask_cond + 1).view(mask.size(-1), 1), 0)
mask = mask.to(dtype)
if past_key_values_length > 0:
mask = torch.cat([torch.zeros(tgt_len, past_key_values_length, dtype=dtype, device=device), mask], dim=-1)
return mask[None, None, :, :].expand(bsz, 1, tgt_len, tgt_len + past_key_values_length)
# Copied from transformers.models.bart.modeling_bart._expand_mask
def _expand_mask(mask: torch.Tensor, dtype: torch.dtype, tgt_len: Optional[int] = None):
"""
Expands attention_mask from `[bsz, seq_len]` to `[bsz, 1, tgt_seq_len, src_seq_len]`.
"""
bsz, src_len = mask.size()
tgt_len = tgt_len if tgt_len is not None else src_len
expanded_mask = mask[:, None, None, :].expand(bsz, 1, tgt_len, src_len).to(dtype)
inverted_mask = 1.0 - expanded_mask
return inverted_mask.masked_fill(inverted_mask.to(torch.bool), torch.finfo(dtype).min)
# Copied from transformers.models.marian.modeling_marian.MarianSinusoidalPositionalEmbedding with Marian->TimeSeries
class TimeSeriesSinusoidalPositionalEmbedding(nn.Embedding):
"""This module produces sinusoidal positional embeddings of any length."""
def __init__(self, num_positions: int, embedding_dim: int, padding_idx: Optional[int] = None) -> None:
super().__init__(num_positions, embedding_dim)
self.weight = self._init_weight(self.weight)
@staticmethod
def _init_weight(out: nn.Parameter) -> nn.Parameter:
"""
Identical to the XLM create_sinusoidal_embeddings except features are not interleaved. The cos features are in
the 2nd half of the vector. [dim // 2:]
"""
n_pos, dim = out.shape
position_enc = np.array(
[[pos / np.power(10000, 2 * (j // 2) / dim) for j in range(dim)] for pos in range(n_pos)]
)
out.requires_grad = False # set early to avoid an error in pytorch-1.8+
sentinel = dim // 2 if dim % 2 == 0 else (dim // 2) + 1
out[:, 0:sentinel] = torch.FloatTensor(np.sin(position_enc[:, 0::2]))
out[:, sentinel:] = torch.FloatTensor(np.cos(position_enc[:, 1::2]))
out.detach_()
return out
@torch.no_grad()
def forward(self, input_ids_shape: torch.Size, past_key_values_length: int = 0) -> torch.Tensor:
"""`input_ids_shape` is expected to be [bsz x seqlen]."""
bsz, seq_len = input_ids_shape[:2]
positions = torch.arange(
past_key_values_length, past_key_values_length + seq_len, dtype=torch.long, device=self.weight.device
)
return super().forward(positions)
class TimeSeriesValueEmbedding(nn.Module):
def __init__(self, feature_size, d_model):
super().__init__()
self.value_projection = nn.Linear(in_features=feature_size, out_features=d_model, bias=False)
def forward(self, x):
return self.value_projection(x)
# Copied from transformers.models.bart.modeling_bart.BartAttention with Bart->TimeSeriesTransformer
class TimeSeriesTransformerAttention(nn.Module):
"""Multi-headed attention from 'Attention Is All You Need' paper"""
def __init__(
self,
embed_dim: int,
num_heads: int,
dropout: float = 0.0,
is_decoder: bool = False,
bias: bool = True,
):
super().__init__()
self.embed_dim = embed_dim
self.num_heads = num_heads
self.dropout = dropout
self.head_dim = embed_dim // num_heads
if (self.head_dim * num_heads) != self.embed_dim:
raise ValueError(
f"embed_dim must be divisible by num_heads (got `embed_dim`: {self.embed_dim}"
f" and `num_heads`: {num_heads})."
)
self.scaling = self.head_dim**-0.5
self.is_decoder = is_decoder
self.k_proj = nn.Linear(embed_dim, embed_dim, bias=bias)
self.v_proj = nn.Linear(embed_dim, embed_dim, bias=bias)
self.q_proj = nn.Linear(embed_dim, embed_dim, bias=bias)
self.out_proj = nn.Linear(embed_dim, embed_dim, bias=bias)
def _shape(self, tensor: torch.Tensor, seq_len: int, bsz: int):
return tensor.view(bsz, seq_len, self.num_heads, self.head_dim).transpose(1, 2).contiguous()
def forward(
self,
hidden_states: torch.Tensor,
key_value_states: Optional[torch.Tensor] = None,
past_key_value: Optional[Tuple[torch.Tensor]] = None,
attention_mask: Optional[torch.Tensor] = None,
layer_head_mask: Optional[torch.Tensor] = None,
output_attentions: bool = False,
) -> Tuple[torch.Tensor, Optional[torch.Tensor], Optional[Tuple[torch.Tensor]]]:
"""Input shape: Batch x Time x Channel"""
# if key_value_states are provided this layer is used as a cross-attention layer
# for the decoder
is_cross_attention = key_value_states is not None
bsz, tgt_len, _ = hidden_states.size()
# get query proj
query_states = self.q_proj(hidden_states) * self.scaling
# get key, value proj
# `past_key_value[0].shape[2] == key_value_states.shape[1]`
# is checking that the `sequence_length` of the `past_key_value` is the same as
# the provided `key_value_states` to support prefix tuning
if (
is_cross_attention
and past_key_value is not None
and past_key_value[0].shape[2] == key_value_states.shape[1]
):
# reuse k,v, cross_attentions
key_states = past_key_value[0]
value_states = past_key_value[1]
elif is_cross_attention:
# cross_attentions
key_states = self._shape(self.k_proj(key_value_states), -1, bsz)
value_states = self._shape(self.v_proj(key_value_states), -1, bsz)
elif past_key_value is not None:
# reuse k, v, self_attention
key_states = self._shape(self.k_proj(hidden_states), -1, bsz)
value_states = self._shape(self.v_proj(hidden_states), -1, bsz)
key_states = torch.cat([past_key_value[0], key_states], dim=2)
value_states = torch.cat([past_key_value[1], value_states], dim=2)
else:
# self_attention
key_states = self._shape(self.k_proj(hidden_states), -1, bsz)
value_states = self._shape(self.v_proj(hidden_states), -1, bsz)
if self.is_decoder:
# if cross_attention save Tuple(torch.Tensor, torch.Tensor) of all cross attention key/value_states.
# Further calls to cross_attention layer can then reuse all cross-attention
# key/value_states (first "if" case)
# if uni-directional self-attention (decoder) save Tuple(torch.Tensor, torch.Tensor) of
# all previous decoder key/value_states. Further calls to uni-directional self-attention
# can concat previous decoder key/value_states to current projected key/value_states (third "elif" case)
# if encoder bi-directional self-attention `past_key_value` is always `None`
past_key_value = (key_states, value_states)
proj_shape = (bsz * self.num_heads, -1, self.head_dim)
query_states = self._shape(query_states, tgt_len, bsz).view(*proj_shape)
key_states = key_states.reshape(*proj_shape)
value_states = value_states.reshape(*proj_shape)
src_len = key_states.size(1)
attn_weights = torch.bmm(query_states, key_states.transpose(1, 2))
if attn_weights.size() != (bsz * self.num_heads, tgt_len, src_len):
raise ValueError(
f"Attention weights should be of size {(bsz * self.num_heads, tgt_len, src_len)}, but is"
f" {attn_weights.size()}"
)
if attention_mask is not None:
if attention_mask.size() != (bsz, 1, tgt_len, src_len):
raise ValueError(
f"Attention mask should be of size {(bsz, 1, tgt_len, src_len)}, but is {attention_mask.size()}"
)
attn_weights = attn_weights.view(bsz, self.num_heads, tgt_len, src_len) + attention_mask
attn_weights = attn_weights.view(bsz * self.num_heads, tgt_len, src_len)
attn_weights = nn.functional.softmax(attn_weights, dim=-1)
if layer_head_mask is not None:
if layer_head_mask.size() != (self.num_heads,):
raise ValueError(
f"Head mask for a single layer should be of size {(self.num_heads,)}, but is"
f" {layer_head_mask.size()}"
)
attn_weights = layer_head_mask.view(1, -1, 1, 1) * attn_weights.view(bsz, self.num_heads, tgt_len, src_len)
attn_weights = attn_weights.view(bsz * self.num_heads, tgt_len, src_len)
if output_attentions:
# this operation is a bit awkward, but it's required to
# make sure that attn_weights keeps its gradient.
# In order to do so, attn_weights have to be reshaped
# twice and have to be reused in the following
attn_weights_reshaped = attn_weights.view(bsz, self.num_heads, tgt_len, src_len)
attn_weights = attn_weights_reshaped.view(bsz * self.num_heads, tgt_len, src_len)
else:
attn_weights_reshaped = None
attn_probs = nn.functional.dropout(attn_weights, p=self.dropout, training=self.training)
attn_output = torch.bmm(attn_probs, value_states)
if attn_output.size() != (bsz * self.num_heads, tgt_len, self.head_dim):
raise ValueError(
f"`attn_output` should be of size {(bsz * self.num_heads, tgt_len, self.head_dim)}, but is"
f" {attn_output.size()}"
)
attn_output = attn_output.view(bsz, self.num_heads, tgt_len, self.head_dim)
attn_output = attn_output.transpose(1, 2)
# Use the `embed_dim` from the config (stored in the class) rather than `hidden_state` because `attn_output` can be
# partitioned across GPUs when using tensor-parallelism.
attn_output = attn_output.reshape(bsz, tgt_len, self.embed_dim)
attn_output = self.out_proj(attn_output)
return attn_output, attn_weights_reshaped, past_key_value
# Copied from transformers.models.bart.modeling_bart.BartEncoderLayer with Bart->TimeSeriesTransformer
class TimeSeriesTransformerEncoderLayer(nn.Module):
def __init__(self, config: TimeSeriesTransformerConfig):
super().__init__()
self.embed_dim = config.d_model
self.self_attn = TimeSeriesTransformerAttention(
embed_dim=self.embed_dim,
num_heads=config.encoder_attention_heads,
dropout=config.attention_dropout,
)
self.self_attn_layer_norm = nn.LayerNorm(self.embed_dim)
self.dropout = config.dropout
self.activation_fn = ACT2FN[config.activation_function]
self.activation_dropout = config.activation_dropout
self.fc1 = nn.Linear(self.embed_dim, config.encoder_ffn_dim)
self.fc2 = nn.Linear(config.encoder_ffn_dim, self.embed_dim)
self.final_layer_norm = nn.LayerNorm(self.embed_dim)
def forward(
self,
hidden_states: torch.FloatTensor,
attention_mask: torch.FloatTensor,
layer_head_mask: torch.FloatTensor,
output_attentions: Optional[bool] = False,
) -> Tuple[torch.FloatTensor, Optional[torch.FloatTensor]]:
"""
Args:
hidden_states (`torch.FloatTensor`): input to the layer of shape `(batch, seq_len, embed_dim)`
attention_mask (`torch.FloatTensor`): attention mask of size
`(batch, 1, tgt_len, src_len)` where padding elements are indicated by very large negative values.
layer_head_mask (`torch.FloatTensor`): mask for attention heads in a given layer of size
`(encoder_attention_heads,)`.
output_attentions (`bool`, *optional*):
Whether or not to return the attentions tensors of all attention layers. See `attentions` under
returned tensors for more detail.
"""
residual = hidden_states
hidden_states, attn_weights, _ = self.self_attn(
hidden_states=hidden_states,
attention_mask=attention_mask,
layer_head_mask=layer_head_mask,
output_attentions=output_attentions,
)
hidden_states = nn.functional.dropout(hidden_states, p=self.dropout, training=self.training)
hidden_states = residual + hidden_states
hidden_states = self.self_attn_layer_norm(hidden_states)
residual = hidden_states
hidden_states = self.activation_fn(self.fc1(hidden_states))
hidden_states = nn.functional.dropout(hidden_states, p=self.activation_dropout, training=self.training)
hidden_states = self.fc2(hidden_states)
hidden_states = nn.functional.dropout(hidden_states, p=self.dropout, training=self.training)
hidden_states = residual + hidden_states
hidden_states = self.final_layer_norm(hidden_states)
if hidden_states.dtype == torch.float16 and (
torch.isinf(hidden_states).any() or torch.isnan(hidden_states).any()
):
clamp_value = torch.finfo(hidden_states.dtype).max - 1000
hidden_states = torch.clamp(hidden_states, min=-clamp_value, max=clamp_value)
outputs = (hidden_states,)
if output_attentions:
outputs += (attn_weights,)
return outputs
# Copied from transformers.models.bart.modeling_bart.BartDecoderLayer with Bart->TimeSeriesTransformer
class TimeSeriesTransformerDecoderLayer(nn.Module):
def __init__(self, config: TimeSeriesTransformerConfig):
super().__init__()
self.embed_dim = config.d_model
self.self_attn = TimeSeriesTransformerAttention(
embed_dim=self.embed_dim,
num_heads=config.decoder_attention_heads,
dropout=config.attention_dropout,
is_decoder=True,
)
self.dropout = config.dropout
self.activation_fn = ACT2FN[config.activation_function]
self.activation_dropout = config.activation_dropout
self.self_attn_layer_norm = nn.LayerNorm(self.embed_dim)
self.encoder_attn = TimeSeriesTransformerAttention(
self.embed_dim,
config.decoder_attention_heads,
dropout=config.attention_dropout,
is_decoder=True,
)
self.encoder_attn_layer_norm = nn.LayerNorm(self.embed_dim)
self.fc1 = nn.Linear(self.embed_dim, config.decoder_ffn_dim)
self.fc2 = nn.Linear(config.decoder_ffn_dim, self.embed_dim)
self.final_layer_norm = nn.LayerNorm(self.embed_dim)
def forward(
self,
hidden_states: torch.Tensor,
attention_mask: Optional[torch.Tensor] = None,
encoder_hidden_states: Optional[torch.Tensor] = None,
encoder_attention_mask: Optional[torch.Tensor] = None,
layer_head_mask: Optional[torch.Tensor] = None,
cross_attn_layer_head_mask: Optional[torch.Tensor] = None,
past_key_value: Optional[Tuple[torch.Tensor]] = None,
output_attentions: Optional[bool] = False,
use_cache: Optional[bool] = True,
) -> Tuple[torch.FloatTensor, Optional[Tuple[torch.FloatTensor, torch.FloatTensor]]]:
"""
Args:
hidden_states (`torch.FloatTensor`): input to the layer of shape `(batch, seq_len, embed_dim)`
attention_mask (`torch.FloatTensor`): attention mask of size
`(batch, 1, tgt_len, src_len)` where padding elements are indicated by very large negative values.
encoder_hidden_states (`torch.FloatTensor`):
cross attention input to the layer of shape `(batch, seq_len, embed_dim)`
encoder_attention_mask (`torch.FloatTensor`): encoder attention mask of size
`(batch, 1, tgt_len, src_len)` where padding elements are indicated by very large negative values.
layer_head_mask (`torch.FloatTensor`): mask for attention heads in a given layer of size
`(encoder_attention_heads,)`.
cross_attn_layer_head_mask (`torch.FloatTensor`): mask for cross-attention heads in a given layer of
size `(decoder_attention_heads,)`.
past_key_value (`Tuple(torch.FloatTensor)`): cached past key and value projection states
output_attentions (`bool`, *optional*):
Whether or not to return the attentions tensors of all attention layers. See `attentions` under
returned tensors for more detail.
"""
residual = hidden_states
# Self Attention
# decoder uni-directional self-attention cached key/values tuple is at positions 1,2
self_attn_past_key_value = past_key_value[:2] if past_key_value is not None else None
# add present self-attn cache to positions 1,2 of present_key_value tuple
hidden_states, self_attn_weights, present_key_value = self.self_attn(
hidden_states=hidden_states,
past_key_value=self_attn_past_key_value,
attention_mask=attention_mask,
layer_head_mask=layer_head_mask,
output_attentions=output_attentions,
)
hidden_states = nn.functional.dropout(hidden_states, p=self.dropout, training=self.training)
hidden_states = residual + hidden_states
hidden_states = self.self_attn_layer_norm(hidden_states)
# Cross-Attention Block
cross_attn_present_key_value = None
cross_attn_weights = None
if encoder_hidden_states is not None:
residual = hidden_states
# cross_attn cached key/values tuple is at positions 3,4 of present_key_value tuple
cross_attn_past_key_value = past_key_value[-2:] if past_key_value is not None else None
hidden_states, cross_attn_weights, cross_attn_present_key_value = self.encoder_attn(
hidden_states=hidden_states,
key_value_states=encoder_hidden_states,
attention_mask=encoder_attention_mask,
layer_head_mask=cross_attn_layer_head_mask,
past_key_value=cross_attn_past_key_value,
output_attentions=output_attentions,
)
hidden_states = nn.functional.dropout(hidden_states, p=self.dropout, training=self.training)
hidden_states = residual + hidden_states
hidden_states = self.encoder_attn_layer_norm(hidden_states)
# add cross-attn to positions 3,4 of present_key_value tuple
present_key_value = present_key_value + cross_attn_present_key_value
# Fully Connected
residual = hidden_states
hidden_states = self.activation_fn(self.fc1(hidden_states))
hidden_states = nn.functional.dropout(hidden_states, p=self.activation_dropout, training=self.training)
hidden_states = self.fc2(hidden_states)
hidden_states = nn.functional.dropout(hidden_states, p=self.dropout, training=self.training)
hidden_states = residual + hidden_states
hidden_states = self.final_layer_norm(hidden_states)
outputs = (hidden_states,)
if output_attentions:
outputs += (self_attn_weights, cross_attn_weights)
if use_cache:
outputs += (present_key_value,)
return outputs
class TimeSeriesTransformerPreTrainedModel(PreTrainedModel):
config_class = TimeSeriesTransformerConfig
base_model_prefix = "model"
main_input_name = "past_values"
supports_gradient_checkpointing = True
def _init_weights(self, module):
std = self.config.init_std
if isinstance(module, nn.Linear):
module.weight.data.normal_(mean=0.0, std=std)
if module.bias is not None:
module.bias.data.zero_()
elif isinstance(module, TimeSeriesSinusoidalPositionalEmbedding):
pass
elif isinstance(module, nn.Embedding):
module.weight.data.normal_(mean=0.0, std=std)
if module.padding_idx is not None:
module.weight.data[module.padding_idx].zero_()
def _set_gradient_checkpointing(self, module, value=False):
if isinstance(module, (TimeSeriesTransformerDecoder, TimeSeriesTransformerEncoder)):
module.gradient_checkpointing = value
TIME_SERIES_TRANSFORMER_START_DOCSTRING = r"""
This model inherits from [`PreTrainedModel`]. Check the superclass documentation for the generic methods the
library implements for all its model (such as downloading or saving, resizing the input embeddings, pruning heads
etc.)
This model is also a PyTorch [torch.nn.Module](https://pytorch.org/docs/stable/nn.html#torch.nn.Module) subclass.
Use it as a regular PyTorch Module and refer to the PyTorch documentation for all matter related to general usage
and behavior.
Parameters:
config ([`TimeSeriesTransformerConfig`]):
Model configuration class with all the parameters of the model. Initializing with a config file does not
load the weights associated with the model, only the configuration. Check out the
[`~PreTrainedModel.from_pretrained`] method to load the model weights.
"""
TIME_SERIES_TRANSFORMER_INPUTS_DOCSTRING = r"""
Args:
past_values (`torch.FloatTensor` of shape `(batch_size, sequence_length)` or `(batch_size, sequence_length, input_size)`):
Past values of the time series, that serve as context in order to predict the future. The sequence size of
this tensor must be larger than the `context_length` of the model, since the model will use the larger size
to construct lag features, i.e. additional values from the past which are added in order to serve as "extra
context".
The `sequence_length` here is equal to `config.context_length` + `max(config.lags_sequence)`, which if no
`lags_sequence` is configured, is equal to `config.context_length` + 7 (as by default, the largest
look-back index in `config.lags_sequence` is 7). The property `_past_length` returns the actual length of
the past.
The `past_values` is what the Transformer encoder gets as input (with optional additional features, such as
`static_categorical_features`, `static_real_features`, `past_time_features` and lags).
Optionally, missing values need to be replaced with zeros and indicated via the `past_observed_mask`.
For multivariate time series, the `input_size` > 1 dimension is required and corresponds to the number of
variates in the time series per time step.
past_time_features (`torch.FloatTensor` of shape `(batch_size, sequence_length, num_features)`):
Required time features, which the model internally will add to `past_values`. These could be things like
"month of year", "day of the month", etc. encoded as vectors (for instance as Fourier features). These
could also be so-called "age" features, which basically help the model know "at which point in life" a
time-series is. Age features have small values for distant past time steps and increase monotonically the
more we approach the current time step. Holiday features are also a good example of time features.
These features serve as the "positional encodings" of the inputs. So contrary to a model like BERT, where
the position encodings are learned from scratch internally as parameters of the model, the Time Series
Transformer requires to provide additional time features. The Time Series Transformer only learns
additional embeddings for `static_categorical_features`.
Additional dynamic real covariates can be concatenated to this tensor, with the caveat that these features
must but known at prediction time.
The `num_features` here is equal to `config.`num_time_features` + `config.num_dynamic_real_features`.
past_observed_mask (`torch.BoolTensor` of shape `(batch_size, sequence_length)` or `(batch_size, sequence_length, input_size)`, *optional*):
Boolean mask to indicate which `past_values` were observed and which were missing. Mask values selected in
`[0, 1]`:
- 1 for values that are **observed**,
- 0 for values that are **missing** (i.e. NaNs that were replaced by zeros).
static_categorical_features (`torch.LongTensor` of shape `(batch_size, number of static categorical features)`, *optional*):
Optional static categorical features for which the model will learn an embedding, which it will add to the
values of the time series.
Static categorical features are features which have the same value for all time steps (static over time).
A typical example of a static categorical feature is a time series ID.
static_real_features (`torch.FloatTensor` of shape `(batch_size, number of static real features)`, *optional*):
Optional static real features which the model will add to the values of the time series.
Static real features are features which have the same value for all time steps (static over time).
A typical example of a static real feature is promotion information.
future_values (`torch.FloatTensor` of shape `(batch_size, prediction_length)` or `(batch_size, prediction_length, input_size)`, *optional*):
Future values of the time series, that serve as labels for the model. The `future_values` is what the
Transformer needs during training to learn to output, given the `past_values`.
The sequence length here is equal to `prediction_length`.
See the demo notebook and code snippets for details.
Optionally, during training any missing values need to be replaced with zeros and indicated via the
`future_observed_mask`.
For multivariate time series, the `input_size` > 1 dimension is required and corresponds to the number of
variates in the time series per time step.
future_time_features (`torch.FloatTensor` of shape `(batch_size, prediction_length, num_features)`):
Required time features for the prediction window, which the model internally will add to `future_values`.
These could be things like "month of year", "day of the month", etc. encoded as vectors (for instance as
Fourier features). These could also be so-called "age" features, which basically help the model know "at
which point in life" a time-series is. Age features have small values for distant past time steps and
increase monotonically the more we approach the current time step. Holiday features are also a good example
of time features.
These features serve as the "positional encodings" of the inputs. So contrary to a model like BERT, where
the position encodings are learned from scratch internally as parameters of the model, the Time Series
Transformer requires to provide additional time features. The Time Series Transformer only learns
additional embeddings for `static_categorical_features`.
Additional dynamic real covariates can be concatenated to this tensor, with the caveat that these features
must but known at prediction time.
The `num_features` here is equal to `config.`num_time_features` + `config.num_dynamic_real_features`.
future_observed_mask (`torch.BoolTensor` of shape `(batch_size, sequence_length)` or `(batch_size, sequence_length, input_size)`, *optional*):
Boolean mask to indicate which `future_values` were observed and which were missing. Mask values selected
in `[0, 1]`:
- 1 for values that are **observed**,
- 0 for values that are **missing** (i.e. NaNs that were replaced by zeros).
This mask is used to filter out missing values for the final loss calculation.
attention_mask (`torch.Tensor` of shape `(batch_size, sequence_length)`, *optional*):
Mask to avoid performing attention on certain token indices. Mask values selected in `[0, 1]`:
- 1 for tokens that are **not masked**,
- 0 for tokens that are **masked**.
[What are attention masks?](../glossary#attention-mask)
decoder_attention_mask (`torch.LongTensor` of shape `(batch_size, target_sequence_length)`, *optional*):
Mask to avoid performing attention on certain token indices. By default, a causal mask will be used, to
make sure the model can only look at previous inputs in order to predict the future.
head_mask (`torch.Tensor` of shape `(encoder_layers, encoder_attention_heads)`, *optional*):
Mask to nullify selected heads of the attention modules in the encoder. Mask values selected in `[0, 1]`:
- 1 indicates the head is **not masked**,
- 0 indicates the head is **masked**.
decoder_head_mask (`torch.Tensor` of shape `(decoder_layers, decoder_attention_heads)`, *optional*):
Mask to nullify selected heads of the attention modules in the decoder. Mask values selected in `[0, 1]`:
- 1 indicates the head is **not masked**,
- 0 indicates the head is **masked**.
cross_attn_head_mask (`torch.Tensor` of shape `(decoder_layers, decoder_attention_heads)`, *optional*):
Mask to nullify selected heads of the cross-attention modules. Mask values selected in `[0, 1]`:
- 1 indicates the head is **not masked**,
- 0 indicates the head is **masked**.
encoder_outputs (`tuple(tuple(torch.FloatTensor)`, *optional*):
Tuple consists of `last_hidden_state`, `hidden_states` (*optional*) and `attentions` (*optional*)
`last_hidden_state` of shape `(batch_size, sequence_length, hidden_size)` (*optional*) is a sequence of
hidden-states at the output of the last layer of the encoder. Used in the cross-attention of the decoder.
past_key_values (`tuple(tuple(torch.FloatTensor))`, *optional*, returned when `use_cache=True` is passed or when `config.use_cache=True`):
Tuple of `tuple(torch.FloatTensor)` of length `config.n_layers`, with each tuple having 2 tensors of shape
`(batch_size, num_heads, sequence_length, embed_size_per_head)`) and 2 additional tensors of shape
`(batch_size, num_heads, encoder_sequence_length, embed_size_per_head)`.
Contains pre-computed hidden-states (key and values in the self-attention blocks and in the cross-attention
blocks) that can be used (see `past_key_values` input) to speed up sequential decoding.
If `past_key_values` are used, the user can optionally input only the last `decoder_input_ids` (those that
don't have their past key value states given to this model) of shape `(batch_size, 1)` instead of all
`decoder_input_ids` of shape `(batch_size, sequence_length)`.
inputs_embeds (`torch.FloatTensor` of shape `(batch_size, sequence_length, hidden_size)`, *optional*):
Optionally, instead of passing `input_ids` you can choose to directly pass an embedded representation. This
is useful if you want more control over how to convert `input_ids` indices into associated vectors than the
model's internal embedding lookup matrix.
use_cache (`bool`, *optional*):
If set to `True`, `past_key_values` key value states are returned and can be used to speed up decoding (see
`past_key_values`).
output_attentions (`bool`, *optional*):
Whether or not to return the attentions tensors of all attention layers. See `attentions` under returned
tensors for more detail.
output_hidden_states (`bool`, *optional*):
Whether or not to return the hidden states of all layers. See `hidden_states` under returned tensors for
more detail.
return_dict (`bool`, *optional*):
Whether or not to return a [`~utils.ModelOutput`] instead of a plain tuple.
"""
class TimeSeriesTransformerEncoder(TimeSeriesTransformerPreTrainedModel):
"""
Transformer encoder consisting of *config.encoder_layers* self attention layers. Each layer is a
[`TimeSeriesTransformerEncoderLayer`].
Args:
config: TimeSeriesTransformerConfig
"""
def __init__(self, config: TimeSeriesTransformerConfig):
super().__init__(config)
self.dropout = config.dropout
self.layerdrop = config.encoder_layerdrop
if config.prediction_length is None:
raise ValueError("The `prediction_length` config needs to be specified.")
self.value_embedding = TimeSeriesValueEmbedding(feature_size=config.feature_size, d_model=config.d_model)
self.embed_positions = TimeSeriesSinusoidalPositionalEmbedding(
config.context_length + config.prediction_length, config.d_model
)
self.layers = nn.ModuleList([TimeSeriesTransformerEncoderLayer(config) for _ in range(config.encoder_layers)])
self.layernorm_embedding = nn.LayerNorm(config.d_model)
self.gradient_checkpointing = False
# Initialize weights and apply final processing
self.post_init()
def forward(
self,
attention_mask: Optional[torch.Tensor] = None,
head_mask: Optional[torch.Tensor] = None,
inputs_embeds: Optional[torch.FloatTensor] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[Tuple, BaseModelOutput]:
r"""
Args:
attention_mask (`torch.Tensor` of shape `(batch_size, sequence_length)`, *optional*):
Mask to avoid performing attention on padding token indices. Mask values selected in `[0, 1]`:
- 1 for tokens that are **not masked**,
- 0 for tokens that are **masked**.
[What are attention masks?](../glossary#attention-mask)
head_mask (`torch.Tensor` of shape `(encoder_layers, encoder_attention_heads)`, *optional*):
Mask to nullify selected heads of the attention modules. Mask values selected in `[0, 1]`:
- 1 indicates the head is **not masked**,
- 0 indicates the head is **masked**.
inputs_embeds (`torch.FloatTensor` of shape `(batch_size, sequence_length, hidden_size)`, *optional*):
Optionally, instead of passing `input_ids` you can choose to directly pass an embedded representation.
This is useful if you want more control over how to convert `input_ids` indices into associated vectors
than the model's internal embedding lookup matrix.
output_attentions (`bool`, *optional*):
Whether or not to return the attentions tensors of all attention layers. See `attentions` under
returned tensors for more detail.
output_hidden_states (`bool`, *optional*):
Whether or not to return the hidden states of all layers. See `hidden_states` under returned tensors
for more detail.
return_dict (`bool`, *optional*):
Whether or not to return a [`~utils.ModelOutput`] instead of a plain tuple.
"""
output_attentions = output_attentions if output_attentions is not None else self.config.output_attentions
output_hidden_states = (
output_hidden_states if output_hidden_states is not None else self.config.output_hidden_states
)
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
hidden_states = self.value_embedding(inputs_embeds)
embed_pos = self.embed_positions(inputs_embeds.size())
hidden_states = self.layernorm_embedding(hidden_states + embed_pos)
hidden_states = nn.functional.dropout(hidden_states, p=self.dropout, training=self.training)
# expand attention_mask
if attention_mask is not None:
# [bsz, seq_len] -> [bsz, 1, tgt_seq_len, src_seq_len]
attention_mask = _expand_mask(attention_mask, inputs_embeds.dtype)
encoder_states = () if output_hidden_states else None
all_attentions = () if output_attentions else None
# check if head_mask has a correct number of layers specified if desired
if head_mask is not None:
if head_mask.size()[0] != (len(self.layers)):
raise ValueError(
f"The head_mask should be specified for {len(self.layers)} layers, but it is for"
f" {head_mask.size()[0]}."
)
for idx, encoder_layer in enumerate(self.layers):
if output_hidden_states:
encoder_states = encoder_states + (hidden_states,)
# add LayerDrop (see https://arxiv.org/abs/1909.11556 for description)
to_drop = False
if self.training:
dropout_probability = torch.rand([])
if dropout_probability < self.layerdrop: # skip the layer
to_drop = True
if to_drop:
layer_outputs = (None, None)
else:
if self.gradient_checkpointing and self.training:
def create_custom_forward(module):
def custom_forward(*inputs):
return module(*inputs, output_attentions)
return custom_forward
layer_outputs = torch.utils.checkpoint.checkpoint(
create_custom_forward(encoder_layer),
hidden_states,
attention_mask,
(head_mask[idx] if head_mask is not None else None),
)
else:
layer_outputs = encoder_layer(
hidden_states,
attention_mask,
layer_head_mask=(head_mask[idx] if head_mask is not None else None),
output_attentions=output_attentions,
)
hidden_states = layer_outputs[0]
if output_attentions:
all_attentions = all_attentions + (layer_outputs[1],)
if output_hidden_states:
encoder_states = encoder_states + (hidden_states,)
if not return_dict:
return tuple(v for v in [hidden_states, encoder_states, all_attentions] if v is not None)
return BaseModelOutput(
last_hidden_state=hidden_states, hidden_states=encoder_states, attentions=all_attentions
)
class TimeSeriesTransformerDecoder(TimeSeriesTransformerPreTrainedModel):
"""
Transformer decoder consisting of *config.decoder_layers* layers. Each layer is a
[`TimeSeriesTransformerDecoderLayer`]
Args:
config: TimeSeriesTransformerConfig
"""
def __init__(self, config: TimeSeriesTransformerConfig):
super().__init__(config)
self.dropout = config.dropout
self.layerdrop = config.decoder_layerdrop
if config.prediction_length is None:
raise ValueError("The `prediction_length` config needs to be specified.")
self.value_embedding = TimeSeriesValueEmbedding(feature_size=config.feature_size, d_model=config.d_model)
self.embed_positions = TimeSeriesSinusoidalPositionalEmbedding(
config.context_length + config.prediction_length, config.d_model
)
self.layers = nn.ModuleList([TimeSeriesTransformerDecoderLayer(config) for _ in range(config.decoder_layers)])
self.layernorm_embedding = nn.LayerNorm(config.d_model)
self.gradient_checkpointing = False
# Initialize weights and apply final processing
self.post_init()
def _prepare_decoder_attention_mask(self, attention_mask, input_shape, inputs_embeds, past_key_values_length):
# create causal mask
# [bsz, seq_len] -> [bsz, 1, tgt_seq_len, src_seq_len]
combined_attention_mask = None
if input_shape[-1] > 1:
combined_attention_mask = _make_causal_mask(
input_shape,
inputs_embeds.dtype,
device=inputs_embeds.device,
past_key_values_length=past_key_values_length,
)
if attention_mask is not None:
# [bsz, seq_len] -> [bsz, 1, tgt_seq_len, src_seq_len]
expanded_attn_mask = _expand_mask(attention_mask, inputs_embeds.dtype, tgt_len=input_shape[-1]).to(
inputs_embeds.device
)
combined_attention_mask = (
expanded_attn_mask if combined_attention_mask is None else expanded_attn_mask + combined_attention_mask
)
return combined_attention_mask
def forward(
self,
attention_mask: Optional[torch.Tensor] = None,
encoder_hidden_states: Optional[torch.FloatTensor] = None,
encoder_attention_mask: Optional[torch.LongTensor] = None,
head_mask: Optional[torch.Tensor] = None,
cross_attn_head_mask: Optional[torch.Tensor] = None,
past_key_values: Optional[List[torch.FloatTensor]] = None,
inputs_embeds: Optional[torch.FloatTensor] = None,
use_cache: Optional[bool] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[Tuple, BaseModelOutputWithPastAndCrossAttentions]:
r"""
Args:
attention_mask (`torch.Tensor` of shape `(batch_size, sequence_length)`, *optional*):
Mask to avoid performing attention on padding token indices. Mask values selected in `[0, 1]`:
- 1 for tokens that are **not masked**,
- 0 for tokens that are **masked**.
[What are attention masks?](../glossary#attention-mask)
encoder_hidden_states (`torch.FloatTensor` of shape `(batch_size, encoder_sequence_length, hidden_size)`, *optional*):
Sequence of hidden-states at the output of the last layer of the encoder. Used in the cross-attention
of the decoder.
encoder_attention_mask (`torch.LongTensor` of shape `(batch_size, encoder_sequence_length)`, *optional*):
Mask to avoid performing cross-attention on padding tokens indices of encoder input_ids. Mask values
selected in `[0, 1]`:
- 1 for tokens that are **not masked**,
- 0 for tokens that are **masked**.
[What are attention masks?](../glossary#attention-mask)
head_mask (`torch.Tensor` of shape `(decoder_layers, decoder_attention_heads)`, *optional*):
Mask to nullify selected heads of the attention modules. Mask values selected in `[0, 1]`:
- 1 indicates the head is **not masked**,
- 0 indicates the head is **masked**.
cross_attn_head_mask (`torch.Tensor` of shape `(decoder_layers, decoder_attention_heads)`, *optional*):
Mask to nullify selected heads of the cross-attention modules in the decoder to avoid performing
cross-attention on hidden heads. Mask values selected in `[0, 1]`:
- 1 indicates the head is **not masked**,
- 0 indicates the head is **masked**.
past_key_values (`tuple(tuple(torch.FloatTensor))`, *optional*, returned when `use_cache=True` is passed or when `config.use_cache=True`):
Tuple of `tuple(torch.FloatTensor)` of length `config.n_layers`, with each tuple having 2 tensors of
shape `(batch_size, num_heads, sequence_length, embed_size_per_head)`) and 2 additional tensors of
shape `(batch_size, num_heads, encoder_sequence_length, embed_size_per_head)`.
Contains pre-computed hidden-states (key and values in the self-attention blocks and in the
cross-attention blocks) that can be used (see `past_key_values` input) to speed up sequential decoding.
If `past_key_values` are used, the user can optionally input only the last `decoder_input_ids` (those
that don't have their past key value states given to this model) of shape `(batch_size, 1)` instead of
all `decoder_input_ids` of shape `(batch_size, sequence_length)`.
inputs_embeds (`torch.FloatTensor` of shape `(batch_size, sequence_length, hidden_size)`, *optional*):
Optionally, instead of passing `input_ids` you can choose to directly pass an embedded representation.
This is useful if you want more control over how to convert `input_ids` indices into associated vectors
than the model's internal embedding lookup matrix.
output_attentions (`bool`, *optional*):
Whether or not to return the attentions tensors of all attention layers. See `attentions` under
returned tensors for more detail.
output_hidden_states (`bool`, *optional*):
Whether or not to return the hidden states of all layers. See `hidden_states` under returned tensors
for more detail.
return_dict (`bool`, *optional*):
Whether or not to return a [`~utils.ModelOutput`] instead of a plain tuple.
"""
output_attentions = output_attentions if output_attentions is not None else self.config.output_attentions
output_hidden_states = (
output_hidden_states if output_hidden_states is not None else self.config.output_hidden_states
)
use_cache = use_cache if use_cache is not None else self.config.use_cache
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
input_shape = inputs_embeds.size()[:-1]
# past_key_values_length
past_key_values_length = past_key_values[0][0].shape[2] if past_key_values is not None else 0
attention_mask = self._prepare_decoder_attention_mask(
attention_mask, input_shape, inputs_embeds, past_key_values_length
)
# expand encoder attention mask
if encoder_hidden_states is not None and encoder_attention_mask is not None:
# [bsz, seq_len] -> [bsz, 1, tgt_seq_len, src_seq_len]
encoder_attention_mask = _expand_mask(encoder_attention_mask, inputs_embeds.dtype, tgt_len=input_shape[-1])
hidden_states = self.value_embedding(inputs_embeds)
embed_pos = self.embed_positions(inputs_embeds.size(), past_key_values_length=self.config.context_length)
hidden_states = self.layernorm_embedding(hidden_states + embed_pos)
hidden_states = nn.functional.dropout(hidden_states, p=self.dropout, training=self.training)
if self.gradient_checkpointing and self.training:
if use_cache:
logger.warning_once(
"`use_cache=True` is incompatible with gradient checkpointing. Setting `use_cache=False`..."
)
use_cache = False
# decoder layers
all_hidden_states = () if output_hidden_states else None
all_self_attns = () if output_attentions else None
all_cross_attentions = () if (output_attentions and encoder_hidden_states is not None) else None
next_decoder_cache = () if use_cache else None
# check if head_mask/cross_attn_head_mask has a correct number of layers specified if desired
for attn_mask, mask_name in zip([head_mask, cross_attn_head_mask], ["head_mask", "cross_attn_head_mask"]):
if attn_mask is not None:
if attn_mask.size()[0] != (len(self.layers)):
raise ValueError(
f"The `{mask_name}` should be specified for {len(self.layers)} layers, but it is for"
f" {head_mask.size()[0]}."
)
for idx, decoder_layer in enumerate(self.layers):
# add LayerDrop (see https://arxiv.org/abs/1909.11556 for description)
if output_hidden_states:
all_hidden_states += (hidden_states,)
if self.training:
dropout_probability = torch.rand([])
if dropout_probability < self.layerdrop:
continue
past_key_value = past_key_values[idx] if past_key_values is not None else None
if self.gradient_checkpointing and self.training:
def create_custom_forward(module):
def custom_forward(*inputs):
# None for past_key_value
return module(*inputs, output_attentions, use_cache)
return custom_forward
layer_outputs = torch.utils.checkpoint.checkpoint(
create_custom_forward(decoder_layer),
hidden_states,
attention_mask,
encoder_hidden_states,
encoder_attention_mask,
head_mask[idx] if head_mask is not None else None,
cross_attn_head_mask[idx] if cross_attn_head_mask is not None else None,
None,
)
else:
layer_outputs = decoder_layer(
hidden_states,
attention_mask=attention_mask,
encoder_hidden_states=encoder_hidden_states,
encoder_attention_mask=encoder_attention_mask,
layer_head_mask=(head_mask[idx] if head_mask is not None else None),
cross_attn_layer_head_mask=(
cross_attn_head_mask[idx] if cross_attn_head_mask is not None else None
),
past_key_value=past_key_value,
output_attentions=output_attentions,
use_cache=use_cache,
)
hidden_states = layer_outputs[0]
if use_cache:
next_decoder_cache += (layer_outputs[3 if output_attentions else 1],)
if output_attentions:
all_self_attns += (layer_outputs[1],)
if encoder_hidden_states is not None:
all_cross_attentions += (layer_outputs[2],)
# add hidden states from the last decoder layer
if output_hidden_states:
all_hidden_states += (hidden_states,)
next_cache = next_decoder_cache if use_cache else None
if not return_dict:
return tuple(
v
for v in [hidden_states, next_cache, all_hidden_states, all_self_attns, all_cross_attentions]
if v is not None
)
return BaseModelOutputWithPastAndCrossAttentions(
last_hidden_state=hidden_states,
past_key_values=next_cache,
hidden_states=all_hidden_states,
attentions=all_self_attns,
cross_attentions=all_cross_attentions,
)
@add_start_docstrings(
"The bare Time Series Transformer Model outputting raw hidden-states without any specific head on top.",
TIME_SERIES_TRANSFORMER_START_DOCSTRING,
)
class TimeSeriesTransformerModel(TimeSeriesTransformerPreTrainedModel):
def __init__(self, config: TimeSeriesTransformerConfig):
super().__init__(config)
if config.scaling == "mean" or config.scaling is True:
self.scaler = TimeSeriesMeanScaler(dim=1, keepdim=True)
elif config.scaling == "std":
self.scaler = TimeSeriesStdScaler(dim=1, keepdim=True)
else:
self.scaler = TimeSeriesNOPScaler(dim=1, keepdim=True)
if config.num_static_categorical_features > 0:
self.embedder = TimeSeriesFeatureEmbedder(
cardinalities=config.cardinality,
embedding_dims=config.embedding_dimension,
)
# transformer encoder-decoder and mask initializer
self.encoder = TimeSeriesTransformerEncoder(config)
self.decoder = TimeSeriesTransformerDecoder(config)
# Initialize weights and apply final processing
self.post_init()
@property
def _past_length(self) -> int:
return self.config.context_length + max(self.config.lags_sequence)
def get_lagged_subsequences(
self, sequence: torch.Tensor, subsequences_length: int, shift: int = 0
) -> torch.Tensor:
"""
Returns lagged subsequences of a given sequence. Returns a tensor of shape (N, S, C, I),
where S = subsequences_length and I = len(indices), containing lagged subsequences. Specifically, lagged[i,
j, :, k] = sequence[i, -indices[k]-S+j, :].
Args:
sequence: Tensor
The sequence from which lagged subsequences should be extracted. Shape: (N, T, C).
subsequences_length : int
Length of the subsequences to be extracted.
shift: int
Shift the lags by this amount back.
"""
sequence_length = sequence.shape[1]
indices = [lag - shift for lag in self.config.lags_sequence]
if max(indices) + subsequences_length > sequence_length:
raise ValueError(
f"lags cannot go further than history length, found lag {max(indices)} "
f"while history length is only {sequence_length}"
)
lagged_values = []
for lag_index in indices:
begin_index = -lag_index - subsequences_length
end_index = -lag_index if lag_index > 0 else None
lagged_values.append(sequence[:, begin_index:end_index, ...])
return torch.stack(lagged_values, dim=-1)
def create_network_inputs(
self,
past_values: torch.Tensor,
past_time_features: torch.Tensor,
static_categorical_features: Optional[torch.Tensor] = None,
static_real_features: Optional[torch.Tensor] = None,
past_observed_mask: Optional[torch.Tensor] = None,
future_values: Optional[torch.Tensor] = None,
future_time_features: Optional[torch.Tensor] = None,
):
# time feature
time_feat = (
torch.cat(
(
past_time_features[:, self._past_length - self.config.context_length :, ...],
future_time_features,
),
dim=1,
)
if future_values is not None
else past_time_features[:, self._past_length - self.config.context_length :, ...]
)
# target
if past_observed_mask is None:
past_observed_mask = torch.ones_like(past_values)
context = past_values[:, -self.config.context_length :]
observed_context = past_observed_mask[:, -self.config.context_length :]
_, loc, scale = self.scaler(context, observed_context)
inputs = (
(torch.cat((past_values, future_values), dim=1) - loc) / scale
if future_values is not None
else (past_values - loc) / scale
)
# static features
log_abs_loc = loc.abs().log1p() if self.config.input_size == 1 else loc.squeeze(1).abs().log1p()
log_scale = scale.log() if self.config.input_size == 1 else scale.squeeze(1).log()
static_feat = torch.cat((log_abs_loc, log_scale), dim=1)
if static_real_features is not None:
static_feat = torch.cat((static_real_features, static_feat), dim=1)
if static_categorical_features is not None:
embedded_cat = self.embedder(static_categorical_features)
static_feat = torch.cat((embedded_cat, static_feat), dim=1)
expanded_static_feat = static_feat.unsqueeze(1).expand(-1, time_feat.shape[1], -1)
# all features
features = torch.cat((expanded_static_feat, time_feat), dim=-1)
# lagged features
subsequences_length = (
self.config.context_length + self.config.prediction_length
if future_values is not None
else self.config.context_length
)
lagged_sequence = self.get_lagged_subsequences(sequence=inputs, subsequences_length=subsequences_length)
lags_shape = lagged_sequence.shape
reshaped_lagged_sequence = lagged_sequence.reshape(lags_shape[0], lags_shape[1], -1)
if reshaped_lagged_sequence.shape[1] != time_feat.shape[1]:
raise ValueError(
f"input length {reshaped_lagged_sequence.shape[1]} and time feature lengths {time_feat.shape[1]} does not match"
)
# transformer inputs
transformer_inputs = torch.cat((reshaped_lagged_sequence, features), dim=-1)
return transformer_inputs, loc, scale, static_feat
def get_encoder(self):
return self.encoder
def get_decoder(self):
return self.decoder
@add_start_docstrings_to_model_forward(TIME_SERIES_TRANSFORMER_INPUTS_DOCSTRING)
@replace_return_docstrings(output_type=Seq2SeqTSModelOutput, config_class=_CONFIG_FOR_DOC)
def forward(
self,
past_values: torch.Tensor,
past_time_features: torch.Tensor,
past_observed_mask: torch.Tensor,
static_categorical_features: Optional[torch.Tensor] = None,
static_real_features: Optional[torch.Tensor] = None,
future_values: Optional[torch.Tensor] = None,
future_time_features: Optional[torch.Tensor] = None,
decoder_attention_mask: Optional[torch.LongTensor] = None,
head_mask: Optional[torch.Tensor] = None,
decoder_head_mask: Optional[torch.Tensor] = None,
cross_attn_head_mask: Optional[torch.Tensor] = None,
encoder_outputs: Optional[List[torch.FloatTensor]] = None,
past_key_values: Optional[List[torch.FloatTensor]] = None,
output_hidden_states: Optional[bool] = None,
output_attentions: Optional[bool] = None,
use_cache: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[Seq2SeqTSModelOutput, Tuple]:
r"""
Returns:
Examples:
```python
>>> from huggingface_hub import hf_hub_download
>>> import torch
>>> from transformers import TimeSeriesTransformerModel
>>> file = hf_hub_download(
... repo_id="hf-internal-testing/tourism-monthly-batch", filename="train-batch.pt", repo_type="dataset"
... )
>>> batch = torch.load(file)
>>> model = TimeSeriesTransformerModel.from_pretrained("huggingface/time-series-transformer-tourism-monthly")
>>> # during training, one provides both past and future values
>>> # as well as possible additional features
>>> outputs = model(
... past_values=batch["past_values"],
... past_time_features=batch["past_time_features"],
... past_observed_mask=batch["past_observed_mask"],
... static_categorical_features=batch["static_categorical_features"],
... static_real_features=batch["static_real_features"],
... future_values=batch["future_values"],
... future_time_features=batch["future_time_features"],
... )
>>> last_hidden_state = outputs.last_hidden_state
```"""
output_attentions = output_attentions if output_attentions is not None else self.config.output_attentions
output_hidden_states = (
output_hidden_states if output_hidden_states is not None else self.config.output_hidden_states
)
use_cache = use_cache if use_cache is not None else self.config.use_cache
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
transformer_inputs, loc, scale, static_feat = self.create_network_inputs(
past_values=past_values,
past_time_features=past_time_features,
past_observed_mask=past_observed_mask,
static_categorical_features=static_categorical_features,
static_real_features=static_real_features,
future_values=future_values,
future_time_features=future_time_features,
)
if encoder_outputs is None:
enc_input = transformer_inputs[:, : self.config.context_length, ...]
encoder_outputs = self.encoder(
inputs_embeds=enc_input,
head_mask=head_mask,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
# If the user passed a tuple for encoder_outputs, we wrap it in a BaseModelOutput when return_dict=True
elif return_dict and not isinstance(encoder_outputs, BaseModelOutput):
encoder_outputs = BaseModelOutput(
last_hidden_state=encoder_outputs[0],
hidden_states=encoder_outputs[1] if len(encoder_outputs) > 1 else None,
attentions=encoder_outputs[2] if len(encoder_outputs) > 2 else None,
)
dec_input = transformer_inputs[:, self.config.context_length :, ...]
decoder_outputs = self.decoder(
inputs_embeds=dec_input,
attention_mask=decoder_attention_mask,
encoder_hidden_states=encoder_outputs[0],
head_mask=decoder_head_mask,
cross_attn_head_mask=cross_attn_head_mask,
past_key_values=past_key_values,
use_cache=use_cache,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
if not return_dict:
return decoder_outputs + encoder_outputs + (loc, scale, static_feat)
return Seq2SeqTSModelOutput(
last_hidden_state=decoder_outputs.last_hidden_state,
past_key_values=decoder_outputs.past_key_values,
decoder_hidden_states=decoder_outputs.hidden_states,
decoder_attentions=decoder_outputs.attentions,
cross_attentions=decoder_outputs.cross_attentions,
encoder_last_hidden_state=encoder_outputs.last_hidden_state,
encoder_hidden_states=encoder_outputs.hidden_states,
encoder_attentions=encoder_outputs.attentions,
loc=loc,
scale=scale,
static_features=static_feat,
)
@add_start_docstrings(
"The Time Series Transformer Model with a distribution head on top for time-series forecasting.",
TIME_SERIES_TRANSFORMER_START_DOCSTRING,
)
class TimeSeriesTransformerForPrediction(TimeSeriesTransformerPreTrainedModel):
def __init__(self, config: TimeSeriesTransformerConfig):
super().__init__(config)
self.model = TimeSeriesTransformerModel(config)
if config.distribution_output == "student_t":
self.distribution_output = StudentTOutput(dim=config.input_size)
elif config.distribution_output == "normal":
self.distribution_output = NormalOutput(dim=config.input_size)
elif config.distribution_output == "negative_binomial":
self.distribution_output = NegativeBinomialOutput(dim=config.input_size)
else:
raise ValueError(f"Unknown distribution output {config.distribution_output}")
self.parameter_projection = self.distribution_output.get_parameter_projection(self.model.config.d_model)
self.target_shape = self.distribution_output.event_shape
if config.loss == "nll":
self.loss = nll
else:
raise ValueError(f"Unknown loss function {config.loss}")
# Initialize weights of distribution_output and apply final processing
self.post_init()
def output_params(self, dec_output):
return self.parameter_projection(dec_output)
def get_encoder(self):
return self.model.get_encoder()
def get_decoder(self):
return self.model.get_decoder()
@torch.jit.ignore
def output_distribution(self, params, loc=None, scale=None, trailing_n=None) -> torch.distributions.Distribution:
sliced_params = params
if trailing_n is not None:
sliced_params = [p[:, -trailing_n:] for p in params]
return self.distribution_output.distribution(sliced_params, loc=loc, scale=scale)
@add_start_docstrings_to_model_forward(TIME_SERIES_TRANSFORMER_INPUTS_DOCSTRING)
@replace_return_docstrings(output_type=Seq2SeqTSModelOutput, config_class=_CONFIG_FOR_DOC)
def forward(
self,
past_values: torch.Tensor,
past_time_features: torch.Tensor,
past_observed_mask: torch.Tensor,
static_categorical_features: Optional[torch.Tensor] = None,
static_real_features: Optional[torch.Tensor] = None,
future_values: Optional[torch.Tensor] = None,
future_time_features: Optional[torch.Tensor] = None,
future_observed_mask: Optional[torch.Tensor] = None,
decoder_attention_mask: Optional[torch.LongTensor] = None,
head_mask: Optional[torch.Tensor] = None,
decoder_head_mask: Optional[torch.Tensor] = None,
cross_attn_head_mask: Optional[torch.Tensor] = None,
encoder_outputs: Optional[List[torch.FloatTensor]] = None,
past_key_values: Optional[List[torch.FloatTensor]] = None,
output_hidden_states: Optional[bool] = None,
output_attentions: Optional[bool] = None,
use_cache: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[Seq2SeqTSModelOutput, Tuple]:
r"""
Returns:
Examples:
```python
>>> from huggingface_hub import hf_hub_download
>>> import torch
>>> from transformers import TimeSeriesTransformerForPrediction
>>> file = hf_hub_download(
... repo_id="hf-internal-testing/tourism-monthly-batch", filename="train-batch.pt", repo_type="dataset"
... )
>>> batch = torch.load(file)
>>> model = TimeSeriesTransformerForPrediction.from_pretrained(
... "huggingface/time-series-transformer-tourism-monthly"
... )
>>> # during training, one provides both past and future values
>>> # as well as possible additional features
>>> outputs = model(
... past_values=batch["past_values"],
... past_time_features=batch["past_time_features"],
... past_observed_mask=batch["past_observed_mask"],
... static_categorical_features=batch["static_categorical_features"],
... static_real_features=batch["static_real_features"],
... future_values=batch["future_values"],
... future_time_features=batch["future_time_features"],
... )
>>> loss = outputs.loss
>>> loss.backward()
>>> # during inference, one only provides past values
>>> # as well as possible additional features
>>> # the model autoregressively generates future values
>>> outputs = model.generate(
... past_values=batch["past_values"],
... past_time_features=batch["past_time_features"],
... past_observed_mask=batch["past_observed_mask"],
... static_categorical_features=batch["static_categorical_features"],
... static_real_features=batch["static_real_features"],
... future_time_features=batch["future_time_features"],
... )
>>> mean_prediction = outputs.sequences.mean(dim=1)
```"""
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
if future_values is not None:
use_cache = False
outputs = self.model(
past_values=past_values,
past_time_features=past_time_features,
past_observed_mask=past_observed_mask,
static_categorical_features=static_categorical_features,
static_real_features=static_real_features,
future_values=future_values,
future_time_features=future_time_features,
decoder_attention_mask=decoder_attention_mask,
head_mask=head_mask,
decoder_head_mask=decoder_head_mask,
cross_attn_head_mask=cross_attn_head_mask,
encoder_outputs=encoder_outputs,
past_key_values=past_key_values,
output_hidden_states=output_hidden_states,
output_attentions=output_attentions,
use_cache=use_cache,
return_dict=return_dict,
)
prediction_loss = None
params = None
if future_values is not None:
params = self.output_params(outputs[0]) # outputs.last_hidden_state
# loc is 3rd last and scale is 2nd last output
distribution = self.output_distribution(params, loc=outputs[-3], scale=outputs[-2])
loss = self.loss(distribution, future_values)
if future_observed_mask is None:
future_observed_mask = torch.ones_like(future_values)
if len(self.target_shape) == 0:
loss_weights = future_observed_mask
else:
loss_weights, _ = future_observed_mask.min(dim=-1, keepdim=False)
prediction_loss = weighted_average(loss, weights=loss_weights)
if not return_dict:
outputs = ((params,) + outputs[1:]) if params is not None else outputs[1:]
return ((prediction_loss,) + outputs) if prediction_loss is not None else outputs
return Seq2SeqTSPredictionOutput(
loss=prediction_loss,
params=params,
past_key_values=outputs.past_key_values,
decoder_hidden_states=outputs.decoder_hidden_states,
decoder_attentions=outputs.decoder_attentions,
cross_attentions=outputs.cross_attentions,
encoder_last_hidden_state=outputs.encoder_last_hidden_state,
encoder_hidden_states=outputs.encoder_hidden_states,
encoder_attentions=outputs.encoder_attentions,
loc=outputs.loc,
scale=outputs.scale,
static_features=outputs.static_features,
)
@torch.no_grad()
def generate(
self,
past_values: torch.Tensor,
past_time_features: torch.Tensor,
future_time_features: torch.Tensor,
past_observed_mask: Optional[torch.Tensor] = None,
static_categorical_features: Optional[torch.Tensor] = None,
static_real_features: Optional[torch.Tensor] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
) -> SampleTSPredictionOutput:
r"""
Greedily generate sequences of sample predictions from a model with a probability distribution head.
Parameters:
past_values (`torch.FloatTensor` of shape `(batch_size, sequence_length)` or `(batch_size, sequence_length, input_size)`):
Past values of the time series, that serve as context in order to predict the future. The sequence size
of this tensor must be larger than the `context_length` of the model, since the model will use the
larger size to construct lag features, i.e. additional values from the past which are added in order to
serve as "extra context".
The `sequence_length` here is equal to `config.context_length` + `max(config.lags_sequence)`, which if
no `lags_sequence` is configured, is equal to `config.context_length` + 7 (as by default, the largest
look-back index in `config.lags_sequence` is 7). The property `_past_length` returns the actual length
of the past.
The `past_values` is what the Transformer encoder gets as input (with optional additional features,
such as `static_categorical_features`, `static_real_features`, `past_time_features` and lags).
Optionally, missing values need to be replaced with zeros and indicated via the `past_observed_mask`.
For multivariate time series, the `input_size` > 1 dimension is required and corresponds to the number
of variates in the time series per time step.
past_time_features (`torch.FloatTensor` of shape `(batch_size, sequence_length, num_features)`):
Required time features, which the model internally will add to `past_values`. These could be things
like "month of year", "day of the month", etc. encoded as vectors (for instance as Fourier features).
These could also be so-called "age" features, which basically help the model know "at which point in
life" a time-series is. Age features have small values for distant past time steps and increase
monotonically the more we approach the current time step. Holiday features are also a good example of
time features.
These features serve as the "positional encodings" of the inputs. So contrary to a model like BERT,
where the position encodings are learned from scratch internally as parameters of the model, the Time
Series Transformer requires to provide additional time features. The Time Series Transformer only
learns additional embeddings for `static_categorical_features`.
Additional dynamic real covariates can be concatenated to this tensor, with the caveat that these
features must but known at prediction time.
The `num_features` here is equal to `config.`num_time_features` + `config.num_dynamic_real_features`.
future_time_features (`torch.FloatTensor` of shape `(batch_size, prediction_length, num_features)`):
Required time features for the prediction window, which the model internally will add to sampled
predictions. These could be things like "month of year", "day of the month", etc. encoded as vectors
(for instance as Fourier features). These could also be so-called "age" features, which basically help
the model know "at which point in life" a time-series is. Age features have small values for distant
past time steps and increase monotonically the more we approach the current time step. Holiday features
are also a good example of time features.
These features serve as the "positional encodings" of the inputs. So contrary to a model like BERT,
where the position encodings are learned from scratch internally as parameters of the model, the Time
Series Transformer requires to provide additional time features. The Time Series Transformer only
learns additional embeddings for `static_categorical_features`.
Additional dynamic real covariates can be concatenated to this tensor, with the caveat that these
features must but known at prediction time.
The `num_features` here is equal to `config.`num_time_features` + `config.num_dynamic_real_features`.
past_observed_mask (`torch.BoolTensor` of shape `(batch_size, sequence_length)` or `(batch_size, sequence_length, input_size)`, *optional*):
Boolean mask to indicate which `past_values` were observed and which were missing. Mask values selected
in `[0, 1]`:
- 1 for values that are **observed**,
- 0 for values that are **missing** (i.e. NaNs that were replaced by zeros).
static_categorical_features (`torch.LongTensor` of shape `(batch_size, number of static categorical features)`, *optional*):
Optional static categorical features for which the model will learn an embedding, which it will add to
the values of the time series.
Static categorical features are features which have the same value for all time steps (static over
time).
A typical example of a static categorical feature is a time series ID.
static_real_features (`torch.FloatTensor` of shape `(batch_size, number of static real features)`, *optional*):
Optional static real features which the model will add to the values of the time series.
Static real features are features which have the same value for all time steps (static over time).
A typical example of a static real feature is promotion information.
output_attentions (`bool`, *optional*):
Whether or not to return the attentions tensors of all attention layers.
output_hidden_states (`bool`, *optional*):
Whether or not to return the hidden states of all layers.
Return:
[`SampleTSPredictionOutput`] where the outputs `sequences` tensor will have shape `(batch_size, number of
samples, prediction_length)` or `(batch_size, number of samples, prediction_length, input_size)` for
multivariate predictions.
"""
outputs = self(
static_categorical_features=static_categorical_features,
static_real_features=static_real_features,
past_time_features=past_time_features,
past_values=past_values,
past_observed_mask=past_observed_mask,
future_time_features=future_time_features,
future_values=None,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=True,
use_cache=True,
)
decoder = self.model.get_decoder()
enc_last_hidden = outputs.encoder_last_hidden_state
loc = outputs.loc
scale = outputs.scale
static_feat = outputs.static_features
num_parallel_samples = self.config.num_parallel_samples
repeated_loc = loc.repeat_interleave(repeats=num_parallel_samples, dim=0)
repeated_scale = scale.repeat_interleave(repeats=num_parallel_samples, dim=0)
repeated_past_values = (
past_values.repeat_interleave(repeats=num_parallel_samples, dim=0) - repeated_loc
) / repeated_scale
expanded_static_feat = static_feat.unsqueeze(1).expand(-1, future_time_features.shape[1], -1)
features = torch.cat((expanded_static_feat, future_time_features), dim=-1)
repeated_features = features.repeat_interleave(repeats=num_parallel_samples, dim=0)
repeated_enc_last_hidden = enc_last_hidden.repeat_interleave(repeats=num_parallel_samples, dim=0)
future_samples = []
# greedy decoding
for k in range(self.config.prediction_length):
lagged_sequence = self.model.get_lagged_subsequences(
sequence=repeated_past_values,
subsequences_length=1 + k,
shift=1,
)
lags_shape = lagged_sequence.shape
reshaped_lagged_sequence = lagged_sequence.reshape(lags_shape[0], lags_shape[1], -1)
decoder_input = torch.cat((reshaped_lagged_sequence, repeated_features[:, : k + 1]), dim=-1)
dec_output = decoder(inputs_embeds=decoder_input, encoder_hidden_states=repeated_enc_last_hidden)
dec_last_hidden = dec_output.last_hidden_state
params = self.parameter_projection(dec_last_hidden[:, -1:])
distr = self.output_distribution(params, loc=repeated_loc, scale=repeated_scale)
next_sample = distr.sample()
repeated_past_values = torch.cat(
(repeated_past_values, (next_sample - repeated_loc) / repeated_scale), dim=1
)
future_samples.append(next_sample)
concat_future_samples = torch.cat(future_samples, dim=1)
return SampleTSPredictionOutput(
sequences=concat_future_samples.reshape(
(-1, num_parallel_samples, self.config.prediction_length) + self.target_shape,
)
)
| 90,470 | 48.302997 | 152 | py |
transformers | transformers-main/src/transformers/models/time_series_transformer/__init__.py | # Copyright 2022 The HuggingFace Team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
from typing import TYPE_CHECKING
from ...utils import OptionalDependencyNotAvailable, _LazyModule, is_torch_available
_import_structure = {
"configuration_time_series_transformer": [
"TIME_SERIES_TRANSFORMER_PRETRAINED_CONFIG_ARCHIVE_MAP",
"TimeSeriesTransformerConfig",
],
}
try:
if not is_torch_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
_import_structure["modeling_time_series_transformer"] = [
"TIME_SERIES_TRANSFORMER_PRETRAINED_MODEL_ARCHIVE_LIST",
"TimeSeriesTransformerForPrediction",
"TimeSeriesTransformerModel",
"TimeSeriesTransformerPreTrainedModel",
]
if TYPE_CHECKING:
from .configuration_time_series_transformer import (
TIME_SERIES_TRANSFORMER_PRETRAINED_CONFIG_ARCHIVE_MAP,
TimeSeriesTransformerConfig,
)
try:
if not is_torch_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
from .modeling_time_series_transformer import (
TIME_SERIES_TRANSFORMER_PRETRAINED_MODEL_ARCHIVE_LIST,
TimeSeriesTransformerForPrediction,
TimeSeriesTransformerModel,
TimeSeriesTransformerPreTrainedModel,
)
else:
import sys
sys.modules[__name__] = _LazyModule(__name__, globals()["__file__"], _import_structure, module_spec=__spec__)
| 2,069 | 31.857143 | 113 | py |
transformers | transformers-main/src/transformers/models/unispeech/convert_unispeech_original_pytorch_checkpoint_to_pytorch.py | # coding=utf-8
# Copyright 2021 The HuggingFace Inc. team.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
"""Convert UniSpeech checkpoint."""
import argparse
import json
import os
import fairseq
import torch
from fairseq.data import Dictionary
from transformers import (
UniSpeechConfig,
UniSpeechForCTC,
UniSpeechForPreTraining,
Wav2Vec2FeatureExtractor,
Wav2Vec2PhonemeCTCTokenizer,
Wav2Vec2Processor,
logging,
)
logging.set_verbosity_info()
logger = logging.get_logger(__name__)
MAPPING = {
"post_extract_proj": "feature_projection.projection",
"encoder.pos_conv.0": "encoder.pos_conv_embed.conv",
"self_attn.k_proj": "encoder.layers.*.attention.k_proj",
"self_attn.v_proj": "encoder.layers.*.attention.v_proj",
"self_attn.q_proj": "encoder.layers.*.attention.q_proj",
"self_attn.out_proj": "encoder.layers.*.attention.out_proj",
"self_attn_layer_norm": "encoder.layers.*.layer_norm",
"fc1": "encoder.layers.*.feed_forward.intermediate_dense",
"fc2": "encoder.layers.*.feed_forward.output_dense",
"final_layer_norm": "encoder.layers.*.final_layer_norm",
"encoder.layer_norm": "encoder.layer_norm",
"w2v_model.layer_norm": "feature_projection.layer_norm",
"quantizer.weight_proj": "quantizer.weight_proj",
"quantizer.vars": "quantizer.codevectors",
"project_q": "project_q",
"final_proj": "project_hid",
"w2v_encoder.proj": "ctc_proj",
"mask_emb": "masked_spec_embed",
}
TOP_LEVEL_KEYS = [
"ctc_proj",
"quantizer.weight_proj",
"quantizer.codevectors",
"project_q",
"project_hid",
]
def set_recursively(hf_pointer, key, value, full_name, weight_type, is_finetuned):
for attribute in key.split("."):
if is_finetuned:
if attribute in ["quantizer", "project_q", "project_hid"]:
# those layers are only relevant for pretraining and should be dropped
return
if attribute == "ctc_proj":
# we should rename `ctc_proj` to `lm_head` for fine-tuned phoneme models
attribute = "lm_head"
hf_pointer = getattr(hf_pointer, attribute)
if weight_type is not None:
hf_shape = getattr(hf_pointer, weight_type).shape
else:
hf_shape = hf_pointer.shape
assert hf_shape == value.shape, (
f"Shape of hf {key + '.' + weight_type if weight_type is not None else ''} is {hf_shape}, but should be"
f" {value.shape} for {full_name}"
)
if weight_type == "weight":
hf_pointer.weight.data = value
elif weight_type == "weight_g":
hf_pointer.weight_g.data = value
elif weight_type == "weight_v":
hf_pointer.weight_v.data = value
elif weight_type == "bias":
hf_pointer.bias.data = value
else:
hf_pointer.data = value
logger.info(f"{key + '.' + weight_type if weight_type is not None else ''} was initialized from {full_name}.")
def recursively_load_weights(fairseq_model, hf_model, is_finetuned):
unused_weights = []
fairseq_dict = fairseq_model.state_dict()
feature_extractor = hf_model.unispeech.feature_extractor
for name, value in fairseq_dict.items():
is_used = False
if "conv_layers" in name:
load_conv_layer(
name,
value,
feature_extractor,
unused_weights,
hf_model.config.feat_extract_norm == "group",
)
is_used = True
else:
for key, mapped_key in MAPPING.items():
mapped_key = "unispeech." + mapped_key if mapped_key not in TOP_LEVEL_KEYS else mapped_key
if key in name or key.split("w2v_model.")[-1] == name.split(".")[0]:
is_used = True
if "*" in mapped_key:
layer_index = name.split(key)[0].split(".")[-2]
mapped_key = mapped_key.replace("*", layer_index)
if "weight_g" in name:
weight_type = "weight_g"
elif "weight_v" in name:
weight_type = "weight_v"
elif "bias" in name:
weight_type = "bias"
elif "weight" in name:
# TODO: don't match quantizer.weight_proj
weight_type = "weight"
else:
weight_type = None
set_recursively(hf_model, mapped_key, value, name, weight_type, is_finetuned)
continue
if not is_used:
unused_weights.append(name)
logger.warning(f"Unused weights: {unused_weights}")
def load_conv_layer(full_name, value, feature_extractor, unused_weights, use_group_norm):
name = full_name.split("conv_layers.")[-1]
items = name.split(".")
layer_id = int(items[0])
type_id = int(items[1])
if type_id == 0:
if "bias" in name:
assert value.shape == feature_extractor.conv_layers[layer_id].conv.bias.data.shape, (
f"{full_name} has size {value.shape}, but"
f" {feature_extractor.conv_layers[layer_id].conv.bias.data.shape} was found."
)
feature_extractor.conv_layers[layer_id].conv.bias.data = value
logger.info(f"Feat extract conv layer {layer_id} was initialized from {full_name}.")
elif "weight" in name:
assert value.shape == feature_extractor.conv_layers[layer_id].conv.weight.data.shape, (
f"{full_name} has size {value.shape}, but"
f" {feature_extractor.conv_layers[layer_id].conv.weight.data.shape} was found."
)
feature_extractor.conv_layers[layer_id].conv.weight.data = value
logger.info(f"Feat extract conv layer {layer_id} was initialized from {full_name}.")
elif (type_id == 2 and not use_group_norm) or (type_id == 2 and layer_id == 0 and use_group_norm):
if "bias" in name:
assert value.shape == feature_extractor.conv_layers[layer_id].layer_norm.bias.data.shape, (
f"{full_name} has size {value.shape}, but {feature_extractor[layer_id].layer_norm.bias.data.shape} was"
" found."
)
feature_extractor.conv_layers[layer_id].layer_norm.bias.data = value
logger.info(f"Feat extract layer norm weight of layer {layer_id} was initialized from {full_name}.")
elif "weight" in name:
assert value.shape == feature_extractor.conv_layers[layer_id].layer_norm.weight.data.shape, (
f"{full_name} has size {value.shape}, but"
f" {feature_extractor[layer_id].layer_norm.weight.data.shape} was found."
)
feature_extractor.conv_layers[layer_id].layer_norm.weight.data = value
logger.info(f"Feat extract layer norm weight of layer {layer_id} was initialized from {full_name}.")
else:
unused_weights.append(full_name)
@torch.no_grad()
def convert_unispeech_checkpoint(
checkpoint_path, pytorch_dump_folder_path, config_path=None, dict_path=None, is_finetuned=True
):
"""
Copy/paste/tweak model's weights to transformers design.
"""
if config_path is not None:
config = UniSpeechConfig.from_pretrained(config_path)
else:
config = UniSpeechConfig()
if is_finetuned:
if dict_path:
target_dict = Dictionary.load_from_json(dict_path)
# important change bos & pad token id since CTC symbol is <pad> and
# not <s> as in fairseq
config.bos_token_id = target_dict.pad_index
config.pad_token_id = target_dict.bos_index
config.eos_token_id = target_dict.eos_index
config.vocab_size = len(target_dict.symbols)
vocab_path = os.path.join(pytorch_dump_folder_path, "vocab.json")
if not os.path.isdir(pytorch_dump_folder_path):
logger.error("--pytorch_dump_folder_path ({}) should be a directory".format(pytorch_dump_folder_path))
return
os.makedirs(pytorch_dump_folder_path, exist_ok=True)
vocab_dict = target_dict.indices
# fairseq has the <pad> and <s> switched
vocab_dict["<pad>"] = 42
vocab_dict["<s>"] = 43
with open(vocab_path, "w", encoding="utf-8") as vocab_handle:
json.dump(vocab_dict, vocab_handle)
tokenizer = Wav2Vec2PhonemeCTCTokenizer(
vocab_path,
unk_token=target_dict.unk_word,
pad_token=target_dict.pad_word,
bos_token=target_dict.bos_word,
eos_token=target_dict.eos_word,
word_delimiter_token="|",
do_lower_case=False,
)
return_attention_mask = True if config.feat_extract_norm == "layer" else False
feature_extractor = Wav2Vec2FeatureExtractor(
feature_size=1,
sampling_rate=16000,
padding_value=0,
do_normalize=True,
return_attention_mask=return_attention_mask,
)
processor = Wav2Vec2Processor(feature_extractor=feature_extractor, tokenizer=tokenizer)
processor.save_pretrained(pytorch_dump_folder_path)
hf_unispeech = UniSpeechForCTC(config)
else:
hf_unispeech = UniSpeechForPreTraining(config)
if is_finetuned:
model, _, _ = fairseq.checkpoint_utils.load_model_ensemble_and_task(
[checkpoint_path], arg_overrides={"data": "/".join(dict_path.split("/")[:-1]), "w2v_path": checkpoint_path}
)
else:
model, _, _ = fairseq.checkpoint_utils.load_model_ensemble_and_task([checkpoint_path])
model = model[0].eval()
recursively_load_weights(model, hf_unispeech, is_finetuned)
hf_unispeech.save_pretrained(pytorch_dump_folder_path)
if __name__ == "__main__":
parser = argparse.ArgumentParser()
parser.add_argument("--pytorch_dump_folder_path", default=None, type=str, help="Path to the output PyTorch model.")
parser.add_argument("--checkpoint_path", default=None, type=str, help="Path to fairseq checkpoint")
parser.add_argument("--dict_path", default=None, type=str, help="Path to dict of fine-tuned model")
parser.add_argument("--config_path", default=None, type=str, help="Path to hf config.json of model to convert")
parser.add_argument(
"--not_finetuned", action="store_true", help="Whether the model to convert is a fine-tuned model or not"
)
args = parser.parse_args()
convert_unispeech_checkpoint(
args.checkpoint_path, args.pytorch_dump_folder_path, args.config_path, args.dict_path, not args.not_finetuned
)
| 11,340 | 40.24 | 119 | py |
transformers | transformers-main/src/transformers/models/unispeech/configuration_unispeech.py | # coding=utf-8
# Copyright 2021 The Fairseq Authors and The HuggingFace Inc. team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
""" UniSpeech model configuration"""
import functools
import operator
from ...configuration_utils import PretrainedConfig
from ...utils import logging
logger = logging.get_logger(__name__)
UNISPEECH_PRETRAINED_CONFIG_ARCHIVE_MAP = {
"microsoft/unispeech-large-1500h-cv": (
"https://huggingface.co/microsoft/unispeech-large-1500h-cv/resolve/main/config.json"
),
# See all UniSpeech models at https://huggingface.co/models?filter=unispeech
}
class UniSpeechConfig(PretrainedConfig):
r"""
This is the configuration class to store the configuration of a [`UniSpeechModel`]. It is used to instantiate an
UniSpeech model according to the specified arguments, defining the model architecture. Instantiating a
configuration with the defaults will yield a similar configuration to that of the UniSpeech
[microsoft/unispeech-large-1500h-cv](https://huggingface.co/microsoft/unispeech-large-1500h-cv) architecture.
Configuration objects inherit from [`PretrainedConfig`] and can be used to control the model outputs. Read the
documentation from [`PretrainedConfig`] for more information.
Args:
vocab_size (`int`, *optional*, defaults to 32):
Vocabulary size of the UniSpeech model. Defines the number of different tokens that can be represented by
the `inputs_ids` passed when calling [`UniSpeechModel`]. Vocabulary size of the model. Defines the
different tokens that can be represented by the *inputs_ids* passed to the forward method of
[`UniSpeechModel`].
hidden_size (`int`, *optional*, defaults to 768):
Dimensionality of the encoder layers and the pooler layer.
num_hidden_layers (`int`, *optional*, defaults to 12):
Number of hidden layers in the Transformer encoder.
num_attention_heads (`int`, *optional*, defaults to 12):
Number of attention heads for each attention layer in the Transformer encoder.
intermediate_size (`int`, *optional*, defaults to 3072):
Dimensionality of the "intermediate" (i.e., feed-forward) layer in the Transformer encoder.
hidden_act (`str` or `function`, *optional*, defaults to `"gelu"`):
The non-linear activation function (function or string) in the encoder and pooler. If string, `"gelu"`,
`"relu"`, `"selu"` and `"gelu_new"` are supported.
hidden_dropout (`float`, *optional*, defaults to 0.1):
The dropout probability for all fully connected layers in the embeddings, encoder, and pooler.
attention_dropout (`float`, *optional*, defaults to 0.1):
The dropout ratio for the attention probabilities.
final_dropout (`float`, *optional*, defaults to 0.1):
The dropout probability for the final projection layer of [`UniSpeechForCTC`].
layerdrop (`float`, *optional*, defaults to 0.1):
The LayerDrop probability. See the [LayerDrop paper](see https://arxiv.org/abs/1909.11556) for more
details.
initializer_range (`float`, *optional*, defaults to 0.02):
The standard deviation of the truncated_normal_initializer for initializing all weight matrices.
layer_norm_eps (`float`, *optional*, defaults to 1e-12):
The epsilon used by the layer normalization layers.
feat_extract_norm (`str`, *optional*, defaults to `"group"`):
The norm to be applied to 1D convolutional layers in feature encoder. One of `"group"` for group
normalization of only the first 1D convolutional layer or `"layer"` for layer normalization of all 1D
convolutional layers.
feat_proj_dropout (`float`, *optional*, defaults to 0.0):
The dropout probability for output of the feature encoder.
feat_extract_activation (`str, `optional`, defaults to `"gelu"`):
The non-linear activation function (function or string) in the 1D convolutional layers of the feature
extractor. If string, `"gelu"`, `"relu"`, `"selu"` and `"gelu_new"` are supported.
feat_quantizer_dropout (`float`, *optional*, defaults to 0.0):
The dropout probabilitiy for quantized feature encoder states.
conv_dim (`Tuple[int]` or `List[int]`, *optional*, defaults to `(512, 512, 512, 512, 512, 512, 512)`):
A tuple of integers defining the number of input and output channels of each 1D convolutional layer in the
feature encoder. The length of *conv_dim* defines the number of 1D convolutional layers.
conv_stride (`Tuple[int]` or `List[int]`, *optional*, defaults to `(5, 2, 2, 2, 2, 2, 2)`):
A tuple of integers defining the stride of each 1D convolutional layer in the feature encoder. The length
of *conv_stride* defines the number of convolutional layers and has to match the length of *conv_dim*.
conv_kernel (`Tuple[int]` or `List[int]`, *optional*, defaults to `(10, 3, 3, 3, 3, 3, 3)`):
A tuple of integers defining the kernel size of each 1D convolutional layer in the feature encoder. The
length of *conv_kernel* defines the number of convolutional layers and has to match the length of
*conv_dim*.
conv_bias (`bool`, *optional*, defaults to `False`):
Whether the 1D convolutional layers have a bias.
num_conv_pos_embeddings (`int`, *optional*, defaults to 128):
Number of convolutional positional embeddings. Defines the kernel size of 1D convolutional positional
embeddings layer.
num_conv_pos_embedding_groups (`int`, *optional*, defaults to 16):
Number of groups of 1D convolutional positional embeddings layer.
do_stable_layer_norm (`bool`, *optional*, defaults to `False`):
Whether to apply *stable* layer norm architecture of the Transformer encoder. `do_stable_layer_norm is
True` corresponds to applying layer norm before the attention layer, whereas `do_stable_layer_norm is
False` corresponds to applying layer norm after the attention layer.
apply_spec_augment (`bool`, *optional*, defaults to `True`):
Whether to apply *SpecAugment* data augmentation to the outputs of the feature encoder. For reference see
[SpecAugment: A Simple Data Augmentation Method for Automatic Speech
Recognition](https://arxiv.org/abs/1904.08779).
mask_time_prob (`float`, *optional*, defaults to 0.05):
Percentage (between 0 and 1) of all feature vectors along the time axis which will be masked. The masking
procecure generates ''mask_time_prob*len(time_axis)/mask_time_length'' independent masks over the axis. If
reasoning from the propability of each feature vector to be chosen as the start of the vector span to be
masked, *mask_time_prob* should be `prob_vector_start*mask_time_length`. Note that overlap may decrease the
actual percentage of masked vectors. This is only relevant if `apply_spec_augment is True`.
mask_time_length (`int`, *optional*, defaults to 10):
Length of vector span along the time axis.
mask_time_min_masks (`int`, *optional*, defaults to 2),:
The minimum number of masks of length `mask_feature_length` generated along the time axis, each time step,
irrespectively of `mask_feature_prob`. Only relevant if ''mask_time_prob*len(time_axis)/mask_time_length <
mask_time_min_masks''
mask_feature_prob (`float`, *optional*, defaults to 0.0):
Percentage (between 0 and 1) of all feature vectors along the feature axis which will be masked. The
masking procecure generates ''mask_feature_prob*len(feature_axis)/mask_time_length'' independent masks over
the axis. If reasoning from the propability of each feature vector to be chosen as the start of the vector
span to be masked, *mask_feature_prob* should be `prob_vector_start*mask_feature_length`. Note that overlap
may decrease the actual percentage of masked vectors. This is only relevant if `apply_spec_augment is
True`.
mask_feature_length (`int`, *optional*, defaults to 10):
Length of vector span along the feature axis.
mask_feature_min_masks (`int`, *optional*, defaults to 0),:
The minimum number of masks of length `mask_feature_length` generated along the feature axis, each time
step, irrespectively of `mask_feature_prob`. Only relevant if
''mask_feature_prob*len(feature_axis)/mask_feature_length < mask_feature_min_masks''
num_codevectors_per_group (`int`, *optional*, defaults to 320):
Number of entries in each quantization codebook (group).
num_codevector_groups (`int`, *optional*, defaults to 2):
Number of codevector groups for product codevector quantization.
contrastive_logits_temperature (`float`, *optional*, defaults to 0.1):
The temperature *kappa* in the contrastive loss.
feat_quantizer_dropout (`float`, *optional*, defaults to 0.0):
The dropout probabilitiy for the output of the feature encoder that's used by the quantizer.
num_negatives (`int`, *optional*, defaults to 100):
Number of negative samples for the contrastive loss.
codevector_dim (`int`, *optional*, defaults to 256):
Dimensionality of the quantized feature vectors.
proj_codevector_dim (`int`, *optional*, defaults to 256):
Dimensionality of the final projection of both the quantized and the transformer features.
diversity_loss_weight (`int`, *optional*, defaults to 0.1):
The weight of the codebook diversity loss component.
ctc_loss_reduction (`str`, *optional*, defaults to `"mean"`):
Specifies the reduction to apply to the output of `torch.nn.CTCLoss`. Only relevant when training an
instance of [`UniSpeechForCTC`].
ctc_zero_infinity (`bool`, *optional*, defaults to `False`):
Whether to zero infinite losses and the associated gradients of `torch.nn.CTCLoss`. Infinite losses mainly
occur when the inputs are too short to be aligned to the targets. Only relevant when training an instance
of [`UniSpeechForCTC`].
use_weighted_layer_sum (`bool`, *optional*, defaults to `False`):
Whether to use a weighted average of layer outputs with learned weights. Only relevant when using an
instance of [`UniSpeechForSequenceClassification`].
classifier_proj_size (`int`, *optional*, defaults to 256):
Dimensionality of the projection before token mean-pooling for classification.
replace_prob (`float`, *optional*, defaults to 0.5):
Propability that transformer feature is replaced by quantized feature for pretraining.
Example:
```python
>>> from transformers import UniSpeechConfig, UniSpeechModel
>>> # Initializing a UniSpeech facebook/unispeech-base-960h style configuration
>>> configuration = UniSpeechConfig()
>>> # Initializing a model (with random weights) from the facebook/unispeech-base-960h style configuration
>>> model = UniSpeechModel(configuration)
>>> # Accessing the model configuration
>>> configuration = model.config
```"""
model_type = "unispeech"
def __init__(
self,
vocab_size=32,
hidden_size=768,
num_hidden_layers=12,
num_attention_heads=12,
intermediate_size=3072,
hidden_act="gelu",
hidden_dropout=0.1,
activation_dropout=0.1,
attention_dropout=0.1,
feat_proj_dropout=0.0,
feat_quantizer_dropout=0.0,
final_dropout=0.1,
layerdrop=0.1,
initializer_range=0.02,
layer_norm_eps=1e-5,
feat_extract_norm="group",
feat_extract_activation="gelu",
conv_dim=(512, 512, 512, 512, 512, 512, 512),
conv_stride=(5, 2, 2, 2, 2, 2, 2),
conv_kernel=(10, 3, 3, 3, 3, 2, 2),
conv_bias=False,
num_conv_pos_embeddings=128,
num_conv_pos_embedding_groups=16,
do_stable_layer_norm=False,
apply_spec_augment=True,
mask_time_prob=0.05,
mask_time_length=10,
mask_time_min_masks=2,
mask_feature_prob=0.0,
mask_feature_length=10,
mask_feature_min_masks=0,
num_codevectors_per_group=320,
num_codevector_groups=2,
contrastive_logits_temperature=0.1,
num_negatives=100,
codevector_dim=256,
proj_codevector_dim=256,
diversity_loss_weight=0.1,
ctc_loss_reduction="mean",
ctc_zero_infinity=False,
use_weighted_layer_sum=False,
classifier_proj_size=256,
num_ctc_classes=80,
pad_token_id=0,
bos_token_id=1,
eos_token_id=2,
replace_prob=0.5,
**kwargs,
):
super().__init__(**kwargs, pad_token_id=pad_token_id, bos_token_id=bos_token_id, eos_token_id=eos_token_id)
self.hidden_size = hidden_size
self.feat_extract_norm = feat_extract_norm
self.feat_extract_activation = feat_extract_activation
self.conv_dim = list(conv_dim)
self.conv_stride = list(conv_stride)
self.conv_kernel = list(conv_kernel)
self.conv_bias = conv_bias
self.num_conv_pos_embeddings = num_conv_pos_embeddings
self.num_conv_pos_embedding_groups = num_conv_pos_embedding_groups
self.num_feat_extract_layers = len(self.conv_dim)
self.num_hidden_layers = num_hidden_layers
self.intermediate_size = intermediate_size
self.hidden_act = hidden_act
self.num_attention_heads = num_attention_heads
self.hidden_dropout = hidden_dropout
self.attention_dropout = attention_dropout
self.activation_dropout = activation_dropout
self.feat_proj_dropout = feat_proj_dropout
self.final_dropout = final_dropout
self.layerdrop = layerdrop
self.layer_norm_eps = layer_norm_eps
self.initializer_range = initializer_range
self.num_ctc_classes = num_ctc_classes
self.vocab_size = vocab_size
self.do_stable_layer_norm = do_stable_layer_norm
self.use_weighted_layer_sum = use_weighted_layer_sum
self.classifier_proj_size = classifier_proj_size
if (
(len(self.conv_stride) != self.num_feat_extract_layers)
or (len(self.conv_kernel) != self.num_feat_extract_layers)
or (len(self.conv_dim) != self.num_feat_extract_layers)
):
raise ValueError(
"Configuration for convolutional layers is incorrect. It is required that `len(config.conv_dim)` =="
" `len(config.conv_stride)` == `len(config.conv_kernel)`, but is `len(config.conv_dim) ="
f" {len(self.conv_dim)}`, `len(config.conv_stride) = {len(self.conv_stride)}`,"
f" `len(config.conv_kernel) = {len(self.conv_kernel)}`."
)
# fine-tuning config parameters for SpecAugment: https://arxiv.org/abs/1904.08779
self.apply_spec_augment = apply_spec_augment
self.mask_time_prob = mask_time_prob
self.mask_time_length = mask_time_length
self.mask_time_min_masks = mask_time_min_masks
self.mask_feature_prob = mask_feature_prob
self.mask_feature_length = mask_feature_length
self.mask_feature_min_masks = mask_feature_min_masks
# parameters for pretraining with codevector quantized representations
self.num_codevectors_per_group = num_codevectors_per_group
self.num_codevector_groups = num_codevector_groups
self.contrastive_logits_temperature = contrastive_logits_temperature
self.feat_quantizer_dropout = feat_quantizer_dropout
self.num_negatives = num_negatives
self.codevector_dim = codevector_dim
self.proj_codevector_dim = proj_codevector_dim
self.diversity_loss_weight = diversity_loss_weight
# ctc loss
self.ctc_loss_reduction = ctc_loss_reduction
self.ctc_zero_infinity = ctc_zero_infinity
# pretraining loss
self.replace_prob = replace_prob
@property
def inputs_to_logits_ratio(self):
return functools.reduce(operator.mul, self.conv_stride, 1)
| 17,161 | 55.453947 | 119 | py |
transformers | transformers-main/src/transformers/models/unispeech/modeling_unispeech.py | # coding=utf-8
# Copyright 2021 The Fairseq Authors and the HuggingFace Inc. team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
""" PyTorch UniSpeech model."""
import math
import warnings
from dataclasses import dataclass
from typing import Optional, Tuple, Union
import numpy as np
import torch
import torch.utils.checkpoint
from torch import nn
from torch.nn import CrossEntropyLoss
from ...activations import ACT2FN
from ...deepspeed import is_deepspeed_zero3_enabled
from ...modeling_outputs import BaseModelOutput, CausalLMOutput, SequenceClassifierOutput, Wav2Vec2BaseModelOutput
from ...modeling_utils import PreTrainedModel
from ...utils import (
ModelOutput,
add_code_sample_docstrings,
add_start_docstrings,
add_start_docstrings_to_model_forward,
logging,
replace_return_docstrings,
)
from .configuration_unispeech import UniSpeechConfig
logger = logging.get_logger(__name__)
_HIDDEN_STATES_START_POSITION = 2
# General docstring
_CONFIG_FOR_DOC = "UniSpeechConfig"
# Base docstring
_CHECKPOINT_FOR_DOC = "patrickvonplaten/unispeech-large-1500h-cv-timit"
_EXPECTED_OUTPUT_SHAPE = [1, 292, 1024]
# CTC docstring
_CTC_EXPECTED_OUTPUT = "'mister quilter is the apposl of the midle classes and weare glad to welcom his gosepl'"
_CTC_EXPECTED_LOSS = 17.17
UNISPEECH_PRETRAINED_MODEL_ARCHIVE_LIST = [
"microsoft/unispeech-large-1500h-cv",
"microsoft/unispeech-large-multi-lingual-1500h-cv",
# See all UniSpeech models at https://huggingface.co/models?filter=unispeech
]
@dataclass
class UniSpeechForPreTrainingOutput(ModelOutput):
"""
Output type of [`UniSpeechForPreTrainingOutput`], with potential hidden states and attentions.
Args:
loss (*optional*, returned when model is in train mode, `torch.FloatTensor` of shape `(1,)`):
Total loss as the sum of the contrastive loss (L_m) and the diversity loss (L_d) as stated in the [official
paper](https://arxiv.org/pdf/2006.11477.pdf) . (classification) loss.
projected_states (`torch.FloatTensor` of shape `(batch_size, sequence_length, config.proj_codevector_dim)`):
Hidden-states of the model projected to *config.proj_codevector_dim* that can be used to predict the masked
projected quantized states.
projected_quantized_states (`torch.FloatTensor` of shape `(batch_size, sequence_length, config.proj_codevector_dim)`):
Quantized extracted feature vectors projected to *config.proj_codevector_dim* representing the positive
target vectors for contrastive loss.
hidden_states (`tuple(torch.FloatTensor)`, *optional*, returned when `output_hidden_states=True` is passed or when `config.output_hidden_states=True`):
Tuple of `torch.FloatTensor` (one for the output of the embeddings + one for the output of each layer) of
shape `(batch_size, sequence_length, hidden_size)`.
Hidden-states of the model at the output of each layer plus the initial embedding outputs.
attentions (`tuple(torch.FloatTensor)`, *optional*, returned when `output_attentions=True` is passed or when `config.output_attentions=True`):
Tuple of `torch.FloatTensor` (one for each layer) of shape `(batch_size, num_heads, sequence_length,
sequence_length)`.
Attentions weights after the attention softmax, used to compute the weighted average in the self-attention
heads.
"""
loss: Optional[torch.FloatTensor] = None
projected_states: torch.FloatTensor = None
projected_quantized_states: torch.FloatTensor = None
codevector_perplexity: torch.FloatTensor = None
hidden_states: Optional[Tuple[torch.FloatTensor]] = None
attentions: Optional[Tuple[torch.FloatTensor]] = None
# Copied from transformers.models.wav2vec2.modeling_wav2vec2._compute_mask_indices
def _compute_mask_indices(
shape: Tuple[int, int],
mask_prob: float,
mask_length: int,
attention_mask: Optional[torch.LongTensor] = None,
min_masks: int = 0,
) -> np.ndarray:
"""
Computes random mask spans for a given shape. Used to implement [SpecAugment: A Simple Data Augmentation Method for
ASR](https://arxiv.org/abs/1904.08779). Note that this method is not optimized to run on TPU and should be run on
CPU as part of the preprocessing during training.
Args:
shape: The shape for which to compute masks. This should be of a tuple of size 2 where
the first element is the batch size and the second element is the length of the axis to span.
mask_prob: The percentage of the whole axis (between 0 and 1) which will be masked. The number of
independently generated mask spans of length `mask_length` is computed by
`mask_prob*shape[1]/mask_length`. Note that due to overlaps, `mask_prob` is an upper bound and the
actual percentage will be smaller.
mask_length: size of the mask
min_masks: minimum number of masked spans
attention_mask: A (right-padded) attention mask which independently shortens the feature axis of
each batch dimension.
"""
batch_size, sequence_length = shape
if mask_length < 1:
raise ValueError("`mask_length` has to be bigger than 0.")
if mask_length > sequence_length:
raise ValueError(
f"`mask_length` has to be smaller than `sequence_length`, but got `mask_length`: {mask_length}"
f" and `sequence_length`: {sequence_length}`"
)
# epsilon is used for probabilistic rounding
epsilon = np.random.rand(1).item()
def compute_num_masked_span(input_length):
"""Given input length, compute how many spans should be masked"""
num_masked_span = int(mask_prob * input_length / mask_length + epsilon)
num_masked_span = max(num_masked_span, min_masks)
# make sure num masked span <= sequence_length
if num_masked_span * mask_length > sequence_length:
num_masked_span = sequence_length // mask_length
# make sure num_masked span is also <= input_length - (mask_length - 1)
if input_length - (mask_length - 1) < num_masked_span:
num_masked_span = max(input_length - (mask_length - 1), 0)
return num_masked_span
# compute number of masked spans in batch
input_lengths = (
attention_mask.sum(-1).detach().tolist()
if attention_mask is not None
else [sequence_length for _ in range(batch_size)]
)
# SpecAugment mask to fill
spec_aug_mask = np.zeros((batch_size, sequence_length), dtype=bool)
spec_aug_mask_idxs = []
max_num_masked_span = compute_num_masked_span(sequence_length)
if max_num_masked_span == 0:
return spec_aug_mask
for input_length in input_lengths:
# compute num of masked spans for this input
num_masked_span = compute_num_masked_span(input_length)
# get random indices to mask
spec_aug_mask_idx = np.random.choice(
np.arange(input_length - (mask_length - 1)), num_masked_span, replace=False
)
# pick first sampled index that will serve as a dummy index to pad vector
# to ensure same dimension for all batches due to probabilistic rounding
# Picking first sample just pads those vectors twice.
if len(spec_aug_mask_idx) == 0:
# this case can only happen if `input_length` is strictly smaller then
# `sequence_length` in which case the last token has to be a padding
# token which we can use as a dummy mask id
dummy_mask_idx = sequence_length - 1
else:
dummy_mask_idx = spec_aug_mask_idx[0]
spec_aug_mask_idx = np.concatenate(
[spec_aug_mask_idx, np.ones(max_num_masked_span - num_masked_span, dtype=np.int32) * dummy_mask_idx]
)
spec_aug_mask_idxs.append(spec_aug_mask_idx)
spec_aug_mask_idxs = np.array(spec_aug_mask_idxs)
# expand masked indices to masked spans
spec_aug_mask_idxs = np.broadcast_to(
spec_aug_mask_idxs[:, :, None], (batch_size, max_num_masked_span, mask_length)
)
spec_aug_mask_idxs = spec_aug_mask_idxs.reshape(batch_size, max_num_masked_span * mask_length)
# add offset to the starting indexes so that indexes now create a span
offsets = np.arange(mask_length)[None, None, :]
offsets = np.broadcast_to(offsets, (batch_size, max_num_masked_span, mask_length)).reshape(
batch_size, max_num_masked_span * mask_length
)
spec_aug_mask_idxs = spec_aug_mask_idxs + offsets
# ensure that we cannot have indices larger than sequence_length
if spec_aug_mask_idxs.max() > sequence_length - 1:
spec_aug_mask_idxs[spec_aug_mask_idxs > sequence_length - 1] = sequence_length - 1
# scatter indices to mask
np.put_along_axis(spec_aug_mask, spec_aug_mask_idxs, 1, -1)
return spec_aug_mask
# Copied from transformers.models.wav2vec2.modeling_wav2vec2.Wav2Vec2NoLayerNormConvLayer with Wav2Vec2->UniSpeech
class UniSpeechNoLayerNormConvLayer(nn.Module):
def __init__(self, config, layer_id=0):
super().__init__()
self.in_conv_dim = config.conv_dim[layer_id - 1] if layer_id > 0 else 1
self.out_conv_dim = config.conv_dim[layer_id]
self.conv = nn.Conv1d(
self.in_conv_dim,
self.out_conv_dim,
kernel_size=config.conv_kernel[layer_id],
stride=config.conv_stride[layer_id],
bias=config.conv_bias,
)
self.activation = ACT2FN[config.feat_extract_activation]
def forward(self, hidden_states):
hidden_states = self.conv(hidden_states)
hidden_states = self.activation(hidden_states)
return hidden_states
# Copied from transformers.models.wav2vec2.modeling_wav2vec2.Wav2Vec2LayerNormConvLayer with Wav2Vec2->UniSpeech
class UniSpeechLayerNormConvLayer(nn.Module):
def __init__(self, config, layer_id=0):
super().__init__()
self.in_conv_dim = config.conv_dim[layer_id - 1] if layer_id > 0 else 1
self.out_conv_dim = config.conv_dim[layer_id]
self.conv = nn.Conv1d(
self.in_conv_dim,
self.out_conv_dim,
kernel_size=config.conv_kernel[layer_id],
stride=config.conv_stride[layer_id],
bias=config.conv_bias,
)
self.layer_norm = nn.LayerNorm(self.out_conv_dim, elementwise_affine=True)
self.activation = ACT2FN[config.feat_extract_activation]
def forward(self, hidden_states):
hidden_states = self.conv(hidden_states)
hidden_states = hidden_states.transpose(-2, -1)
hidden_states = self.layer_norm(hidden_states)
hidden_states = hidden_states.transpose(-2, -1)
hidden_states = self.activation(hidden_states)
return hidden_states
# Copied from transformers.models.wav2vec2.modeling_wav2vec2.Wav2Vec2GroupNormConvLayer with Wav2Vec2->UniSpeech
class UniSpeechGroupNormConvLayer(nn.Module):
def __init__(self, config, layer_id=0):
super().__init__()
self.in_conv_dim = config.conv_dim[layer_id - 1] if layer_id > 0 else 1
self.out_conv_dim = config.conv_dim[layer_id]
self.conv = nn.Conv1d(
self.in_conv_dim,
self.out_conv_dim,
kernel_size=config.conv_kernel[layer_id],
stride=config.conv_stride[layer_id],
bias=config.conv_bias,
)
self.activation = ACT2FN[config.feat_extract_activation]
self.layer_norm = nn.GroupNorm(num_groups=self.out_conv_dim, num_channels=self.out_conv_dim, affine=True)
def forward(self, hidden_states):
hidden_states = self.conv(hidden_states)
hidden_states = self.layer_norm(hidden_states)
hidden_states = self.activation(hidden_states)
return hidden_states
# Copied from transformers.models.wav2vec2.modeling_wav2vec2.Wav2Vec2PositionalConvEmbedding with Wav2Vec2->UniSpeech
class UniSpeechPositionalConvEmbedding(nn.Module):
def __init__(self, config):
super().__init__()
self.conv = nn.Conv1d(
config.hidden_size,
config.hidden_size,
kernel_size=config.num_conv_pos_embeddings,
padding=config.num_conv_pos_embeddings // 2,
groups=config.num_conv_pos_embedding_groups,
)
weight_norm = nn.utils.weight_norm
if hasattr(nn.utils.parametrizations, "weight_norm"):
weight_norm = nn.utils.parametrizations.weight_norm
if is_deepspeed_zero3_enabled():
import deepspeed
with deepspeed.zero.GatheredParameters(self.conv.weight, modifier_rank=0):
self.conv = weight_norm(self.conv, name="weight", dim=2)
deepspeed.zero.register_external_parameter(self, self.conv.weight_v)
deepspeed.zero.register_external_parameter(self, self.conv.weight_g)
else:
self.conv = weight_norm(self.conv, name="weight", dim=2)
self.padding = UniSpeechSamePadLayer(config.num_conv_pos_embeddings)
self.activation = ACT2FN[config.feat_extract_activation]
def forward(self, hidden_states):
hidden_states = hidden_states.transpose(1, 2)
hidden_states = self.conv(hidden_states)
hidden_states = self.padding(hidden_states)
hidden_states = self.activation(hidden_states)
hidden_states = hidden_states.transpose(1, 2)
return hidden_states
# Copied from transformers.models.wav2vec2.modeling_wav2vec2.Wav2Vec2SamePadLayer with Wav2Vec2->UniSpeech
class UniSpeechSamePadLayer(nn.Module):
def __init__(self, num_conv_pos_embeddings):
super().__init__()
self.num_pad_remove = 1 if num_conv_pos_embeddings % 2 == 0 else 0
def forward(self, hidden_states):
if self.num_pad_remove > 0:
hidden_states = hidden_states[:, :, : -self.num_pad_remove]
return hidden_states
# Copied from transformers.models.wav2vec2.modeling_wav2vec2.Wav2Vec2FeatureEncoder with Wav2Vec2->UniSpeech
class UniSpeechFeatureEncoder(nn.Module):
"""Construct the features from raw audio waveform"""
def __init__(self, config):
super().__init__()
if config.feat_extract_norm == "group":
conv_layers = [UniSpeechGroupNormConvLayer(config, layer_id=0)] + [
UniSpeechNoLayerNormConvLayer(config, layer_id=i + 1)
for i in range(config.num_feat_extract_layers - 1)
]
elif config.feat_extract_norm == "layer":
conv_layers = [
UniSpeechLayerNormConvLayer(config, layer_id=i) for i in range(config.num_feat_extract_layers)
]
else:
raise ValueError(
f"`config.feat_extract_norm` is {config.feat_extract_norm}, but has to be one of ['group', 'layer']"
)
self.conv_layers = nn.ModuleList(conv_layers)
self.gradient_checkpointing = False
self._requires_grad = True
def _freeze_parameters(self):
for param in self.parameters():
param.requires_grad = False
self._requires_grad = False
def forward(self, input_values):
hidden_states = input_values[:, None]
# make sure hidden_states require grad for gradient_checkpointing
if self._requires_grad and self.training:
hidden_states.requires_grad = True
for conv_layer in self.conv_layers:
if self._requires_grad and self.gradient_checkpointing and self.training:
def create_custom_forward(module):
def custom_forward(*inputs):
return module(*inputs)
return custom_forward
hidden_states = torch.utils.checkpoint.checkpoint(
create_custom_forward(conv_layer),
hidden_states,
)
else:
hidden_states = conv_layer(hidden_states)
return hidden_states
class UniSpeechFeatureExtractor(UniSpeechFeatureEncoder):
def __init__(self, config):
super().__init__(config)
warnings.warn(
f"The class `{self.__class__.__name__}` has been depreciated "
"and will be removed in Transformers v5. "
f"Use `{self.__class__.__bases__[0].__name__}` instead.",
FutureWarning,
)
# Copied from transformers.models.wav2vec2.modeling_wav2vec2.Wav2Vec2FeatureProjection with Wav2Vec2->UniSpeech
class UniSpeechFeatureProjection(nn.Module):
def __init__(self, config):
super().__init__()
self.layer_norm = nn.LayerNorm(config.conv_dim[-1], eps=config.layer_norm_eps)
self.projection = nn.Linear(config.conv_dim[-1], config.hidden_size)
self.dropout = nn.Dropout(config.feat_proj_dropout)
def forward(self, hidden_states):
# non-projected hidden states are needed for quantization
norm_hidden_states = self.layer_norm(hidden_states)
hidden_states = self.projection(norm_hidden_states)
hidden_states = self.dropout(hidden_states)
return hidden_states, norm_hidden_states
# Copied from transformers.models.bart.modeling_bart.BartAttention with Bart->UniSpeech
class UniSpeechAttention(nn.Module):
"""Multi-headed attention from 'Attention Is All You Need' paper"""
def __init__(
self,
embed_dim: int,
num_heads: int,
dropout: float = 0.0,
is_decoder: bool = False,
bias: bool = True,
):
super().__init__()
self.embed_dim = embed_dim
self.num_heads = num_heads
self.dropout = dropout
self.head_dim = embed_dim // num_heads
if (self.head_dim * num_heads) != self.embed_dim:
raise ValueError(
f"embed_dim must be divisible by num_heads (got `embed_dim`: {self.embed_dim}"
f" and `num_heads`: {num_heads})."
)
self.scaling = self.head_dim**-0.5
self.is_decoder = is_decoder
self.k_proj = nn.Linear(embed_dim, embed_dim, bias=bias)
self.v_proj = nn.Linear(embed_dim, embed_dim, bias=bias)
self.q_proj = nn.Linear(embed_dim, embed_dim, bias=bias)
self.out_proj = nn.Linear(embed_dim, embed_dim, bias=bias)
def _shape(self, tensor: torch.Tensor, seq_len: int, bsz: int):
return tensor.view(bsz, seq_len, self.num_heads, self.head_dim).transpose(1, 2).contiguous()
def forward(
self,
hidden_states: torch.Tensor,
key_value_states: Optional[torch.Tensor] = None,
past_key_value: Optional[Tuple[torch.Tensor]] = None,
attention_mask: Optional[torch.Tensor] = None,
layer_head_mask: Optional[torch.Tensor] = None,
output_attentions: bool = False,
) -> Tuple[torch.Tensor, Optional[torch.Tensor], Optional[Tuple[torch.Tensor]]]:
"""Input shape: Batch x Time x Channel"""
# if key_value_states are provided this layer is used as a cross-attention layer
# for the decoder
is_cross_attention = key_value_states is not None
bsz, tgt_len, _ = hidden_states.size()
# get query proj
query_states = self.q_proj(hidden_states) * self.scaling
# get key, value proj
# `past_key_value[0].shape[2] == key_value_states.shape[1]`
# is checking that the `sequence_length` of the `past_key_value` is the same as
# the provided `key_value_states` to support prefix tuning
if (
is_cross_attention
and past_key_value is not None
and past_key_value[0].shape[2] == key_value_states.shape[1]
):
# reuse k,v, cross_attentions
key_states = past_key_value[0]
value_states = past_key_value[1]
elif is_cross_attention:
# cross_attentions
key_states = self._shape(self.k_proj(key_value_states), -1, bsz)
value_states = self._shape(self.v_proj(key_value_states), -1, bsz)
elif past_key_value is not None:
# reuse k, v, self_attention
key_states = self._shape(self.k_proj(hidden_states), -1, bsz)
value_states = self._shape(self.v_proj(hidden_states), -1, bsz)
key_states = torch.cat([past_key_value[0], key_states], dim=2)
value_states = torch.cat([past_key_value[1], value_states], dim=2)
else:
# self_attention
key_states = self._shape(self.k_proj(hidden_states), -1, bsz)
value_states = self._shape(self.v_proj(hidden_states), -1, bsz)
if self.is_decoder:
# if cross_attention save Tuple(torch.Tensor, torch.Tensor) of all cross attention key/value_states.
# Further calls to cross_attention layer can then reuse all cross-attention
# key/value_states (first "if" case)
# if uni-directional self-attention (decoder) save Tuple(torch.Tensor, torch.Tensor) of
# all previous decoder key/value_states. Further calls to uni-directional self-attention
# can concat previous decoder key/value_states to current projected key/value_states (third "elif" case)
# if encoder bi-directional self-attention `past_key_value` is always `None`
past_key_value = (key_states, value_states)
proj_shape = (bsz * self.num_heads, -1, self.head_dim)
query_states = self._shape(query_states, tgt_len, bsz).view(*proj_shape)
key_states = key_states.reshape(*proj_shape)
value_states = value_states.reshape(*proj_shape)
src_len = key_states.size(1)
attn_weights = torch.bmm(query_states, key_states.transpose(1, 2))
if attn_weights.size() != (bsz * self.num_heads, tgt_len, src_len):
raise ValueError(
f"Attention weights should be of size {(bsz * self.num_heads, tgt_len, src_len)}, but is"
f" {attn_weights.size()}"
)
if attention_mask is not None:
if attention_mask.size() != (bsz, 1, tgt_len, src_len):
raise ValueError(
f"Attention mask should be of size {(bsz, 1, tgt_len, src_len)}, but is {attention_mask.size()}"
)
attn_weights = attn_weights.view(bsz, self.num_heads, tgt_len, src_len) + attention_mask
attn_weights = attn_weights.view(bsz * self.num_heads, tgt_len, src_len)
attn_weights = nn.functional.softmax(attn_weights, dim=-1)
if layer_head_mask is not None:
if layer_head_mask.size() != (self.num_heads,):
raise ValueError(
f"Head mask for a single layer should be of size {(self.num_heads,)}, but is"
f" {layer_head_mask.size()}"
)
attn_weights = layer_head_mask.view(1, -1, 1, 1) * attn_weights.view(bsz, self.num_heads, tgt_len, src_len)
attn_weights = attn_weights.view(bsz * self.num_heads, tgt_len, src_len)
if output_attentions:
# this operation is a bit awkward, but it's required to
# make sure that attn_weights keeps its gradient.
# In order to do so, attn_weights have to be reshaped
# twice and have to be reused in the following
attn_weights_reshaped = attn_weights.view(bsz, self.num_heads, tgt_len, src_len)
attn_weights = attn_weights_reshaped.view(bsz * self.num_heads, tgt_len, src_len)
else:
attn_weights_reshaped = None
attn_probs = nn.functional.dropout(attn_weights, p=self.dropout, training=self.training)
attn_output = torch.bmm(attn_probs, value_states)
if attn_output.size() != (bsz * self.num_heads, tgt_len, self.head_dim):
raise ValueError(
f"`attn_output` should be of size {(bsz * self.num_heads, tgt_len, self.head_dim)}, but is"
f" {attn_output.size()}"
)
attn_output = attn_output.view(bsz, self.num_heads, tgt_len, self.head_dim)
attn_output = attn_output.transpose(1, 2)
# Use the `embed_dim` from the config (stored in the class) rather than `hidden_state` because `attn_output` can be
# partitioned across GPUs when using tensor-parallelism.
attn_output = attn_output.reshape(bsz, tgt_len, self.embed_dim)
attn_output = self.out_proj(attn_output)
return attn_output, attn_weights_reshaped, past_key_value
# Copied from transformers.models.wav2vec2.modeling_wav2vec2.Wav2Vec2FeedForward with Wav2Vec2->UniSpeech
class UniSpeechFeedForward(nn.Module):
def __init__(self, config):
super().__init__()
self.intermediate_dropout = nn.Dropout(config.activation_dropout)
self.intermediate_dense = nn.Linear(config.hidden_size, config.intermediate_size)
if isinstance(config.hidden_act, str):
self.intermediate_act_fn = ACT2FN[config.hidden_act]
else:
self.intermediate_act_fn = config.hidden_act
self.output_dense = nn.Linear(config.intermediate_size, config.hidden_size)
self.output_dropout = nn.Dropout(config.hidden_dropout)
def forward(self, hidden_states):
hidden_states = self.intermediate_dense(hidden_states)
hidden_states = self.intermediate_act_fn(hidden_states)
hidden_states = self.intermediate_dropout(hidden_states)
hidden_states = self.output_dense(hidden_states)
hidden_states = self.output_dropout(hidden_states)
return hidden_states
# Copied from transformers.models.wav2vec2.modeling_wav2vec2.Wav2Vec2EncoderLayer with Wav2Vec2->UniSpeech
class UniSpeechEncoderLayer(nn.Module):
def __init__(self, config):
super().__init__()
self.attention = UniSpeechAttention(
embed_dim=config.hidden_size,
num_heads=config.num_attention_heads,
dropout=config.attention_dropout,
is_decoder=False,
)
self.dropout = nn.Dropout(config.hidden_dropout)
self.layer_norm = nn.LayerNorm(config.hidden_size, eps=config.layer_norm_eps)
self.feed_forward = UniSpeechFeedForward(config)
self.final_layer_norm = nn.LayerNorm(config.hidden_size, eps=config.layer_norm_eps)
def forward(self, hidden_states, attention_mask=None, output_attentions=False):
attn_residual = hidden_states
hidden_states, attn_weights, _ = self.attention(
hidden_states, attention_mask=attention_mask, output_attentions=output_attentions
)
hidden_states = self.dropout(hidden_states)
hidden_states = attn_residual + hidden_states
hidden_states = self.layer_norm(hidden_states)
hidden_states = hidden_states + self.feed_forward(hidden_states)
hidden_states = self.final_layer_norm(hidden_states)
outputs = (hidden_states,)
if output_attentions:
outputs += (attn_weights,)
return outputs
# Copied from transformers.models.wav2vec2.modeling_wav2vec2.Wav2Vec2AttnAdapterLayer with Wav2Vec2->UniSpeech
class UniSpeechAttnAdapterLayer(nn.Module):
def __init__(self, config):
"""
Implements adapter modules directly with 3D tensor weight as parameters and without using ModuleList to speed
up training throughput.
"""
super().__init__()
self.input_dim = config.adapter_attn_dim
self.hidden_dim = config.hidden_size
self.norm = nn.LayerNorm(self.hidden_dim)
self.linear_1 = nn.Linear(self.hidden_dim, self.input_dim)
self.act_fn = nn.ReLU()
self.linear_2 = nn.Linear(self.input_dim, self.hidden_dim)
def forward(self, hidden_states: torch.FloatTensor):
hidden_states = self.norm(hidden_states)
hidden_states = self.linear_1(hidden_states)
hidden_states = self.act_fn(hidden_states)
hidden_states = self.linear_2(hidden_states)
return hidden_states
# Copied from transformers.models.wav2vec2.modeling_wav2vec2.Wav2Vec2EncoderLayerStableLayerNorm with Wav2Vec2->UniSpeech
class UniSpeechEncoderLayerStableLayerNorm(nn.Module):
def __init__(self, config):
super().__init__()
self.attention = UniSpeechAttention(
embed_dim=config.hidden_size,
num_heads=config.num_attention_heads,
dropout=config.attention_dropout,
is_decoder=False,
)
self.dropout = nn.Dropout(config.hidden_dropout)
self.layer_norm = nn.LayerNorm(config.hidden_size, eps=config.layer_norm_eps)
self.feed_forward = UniSpeechFeedForward(config)
self.final_layer_norm = nn.LayerNorm(config.hidden_size, eps=config.layer_norm_eps)
if getattr(config, "adapter_attn_dim", None) is not None:
self.adapter_layer = UniSpeechAttnAdapterLayer(config)
else:
self.adapter_layer = None
def forward(
self,
hidden_states: torch.Tensor,
attention_mask: Optional[torch.Tensor] = None,
output_attentions: bool = False,
):
attn_residual = hidden_states
hidden_states = self.layer_norm(hidden_states)
hidden_states, attn_weights, _ = self.attention(
hidden_states, attention_mask=attention_mask, output_attentions=output_attentions
)
hidden_states = self.dropout(hidden_states)
hidden_states = attn_residual + hidden_states
hidden_states = hidden_states + self.feed_forward(self.final_layer_norm(hidden_states))
if self.adapter_layer is not None:
hidden_states = hidden_states + self.adapter_layer(hidden_states)
outputs = (hidden_states,)
if output_attentions:
outputs += (attn_weights,)
return outputs
# Copied from transformers.models.wav2vec2.modeling_wav2vec2.Wav2Vec2Encoder with Wav2Vec2->UniSpeech
class UniSpeechEncoder(nn.Module):
def __init__(self, config):
super().__init__()
self.config = config
self.pos_conv_embed = UniSpeechPositionalConvEmbedding(config)
self.layer_norm = nn.LayerNorm(config.hidden_size, eps=config.layer_norm_eps)
self.dropout = nn.Dropout(config.hidden_dropout)
self.layers = nn.ModuleList([UniSpeechEncoderLayer(config) for _ in range(config.num_hidden_layers)])
self.gradient_checkpointing = False
def forward(
self,
hidden_states: torch.tensor,
attention_mask: Optional[torch.Tensor] = None,
output_attentions: bool = False,
output_hidden_states: bool = False,
return_dict: bool = True,
):
all_hidden_states = () if output_hidden_states else None
all_self_attentions = () if output_attentions else None
if attention_mask is not None:
# make sure padded tokens output 0
expand_attention_mask = attention_mask.unsqueeze(-1).repeat(1, 1, hidden_states.shape[2])
hidden_states[~expand_attention_mask] = 0
# extend attention_mask
attention_mask = 1.0 - attention_mask[:, None, None, :].to(dtype=hidden_states.dtype)
attention_mask = attention_mask * torch.finfo(hidden_states.dtype).min
attention_mask = attention_mask.expand(
attention_mask.shape[0], 1, attention_mask.shape[-1], attention_mask.shape[-1]
)
position_embeddings = self.pos_conv_embed(hidden_states)
hidden_states = hidden_states + position_embeddings
hidden_states = self.layer_norm(hidden_states)
hidden_states = self.dropout(hidden_states)
deepspeed_zero3_is_enabled = is_deepspeed_zero3_enabled()
for layer in self.layers:
if output_hidden_states:
all_hidden_states = all_hidden_states + (hidden_states,)
# add LayerDrop (see https://arxiv.org/abs/1909.11556 for description)
dropout_probability = torch.rand([])
skip_the_layer = True if self.training and (dropout_probability < self.config.layerdrop) else False
if not skip_the_layer or deepspeed_zero3_is_enabled:
# under deepspeed zero3 all gpus must run in sync
if self.gradient_checkpointing and self.training:
# create gradient checkpointing function
def create_custom_forward(module):
def custom_forward(*inputs):
return module(*inputs, output_attentions)
return custom_forward
layer_outputs = torch.utils.checkpoint.checkpoint(
create_custom_forward(layer),
hidden_states,
attention_mask,
)
else:
layer_outputs = layer(
hidden_states, attention_mask=attention_mask, output_attentions=output_attentions
)
hidden_states = layer_outputs[0]
if skip_the_layer:
layer_outputs = (None, None)
if output_attentions:
all_self_attentions = all_self_attentions + (layer_outputs[1],)
if output_hidden_states:
all_hidden_states = all_hidden_states + (hidden_states,)
if not return_dict:
return tuple(v for v in [hidden_states, all_hidden_states, all_self_attentions] if v is not None)
return BaseModelOutput(
last_hidden_state=hidden_states,
hidden_states=all_hidden_states,
attentions=all_self_attentions,
)
# Copied from transformers.models.wav2vec2.modeling_wav2vec2.Wav2Vec2EncoderStableLayerNorm with Wav2Vec2->UniSpeech
class UniSpeechEncoderStableLayerNorm(nn.Module):
def __init__(self, config):
super().__init__()
self.config = config
self.pos_conv_embed = UniSpeechPositionalConvEmbedding(config)
self.layer_norm = nn.LayerNorm(config.hidden_size, eps=config.layer_norm_eps)
self.dropout = nn.Dropout(config.hidden_dropout)
self.layers = nn.ModuleList(
[UniSpeechEncoderLayerStableLayerNorm(config) for _ in range(config.num_hidden_layers)]
)
self.gradient_checkpointing = False
def forward(
self,
hidden_states,
attention_mask=None,
output_attentions=False,
output_hidden_states=False,
return_dict=True,
):
all_hidden_states = () if output_hidden_states else None
all_self_attentions = () if output_attentions else None
if attention_mask is not None:
# make sure padded tokens are not attended to
expand_attention_mask = attention_mask.unsqueeze(-1).repeat(1, 1, hidden_states.shape[2])
hidden_states[~expand_attention_mask] = 0
# extend attention_mask
attention_mask = 1.0 - attention_mask[:, None, None, :].to(dtype=hidden_states.dtype)
attention_mask = attention_mask * torch.finfo(hidden_states.dtype).min
attention_mask = attention_mask.expand(
attention_mask.shape[0], 1, attention_mask.shape[-1], attention_mask.shape[-1]
)
position_embeddings = self.pos_conv_embed(hidden_states)
hidden_states = hidden_states + position_embeddings
hidden_states = self.dropout(hidden_states)
deepspeed_zero3_is_enabled = is_deepspeed_zero3_enabled()
for layer in self.layers:
if output_hidden_states:
all_hidden_states = all_hidden_states + (hidden_states,)
# add LayerDrop (see https://arxiv.org/abs/1909.11556 for description)
dropout_probability = torch.rand([])
skip_the_layer = True if self.training and (dropout_probability < self.config.layerdrop) else False
if not skip_the_layer or deepspeed_zero3_is_enabled:
# under deepspeed zero3 all gpus must run in sync
# XXX: could optimize this like synced_gpus in generate_utils but not sure if it's worth the code complication
if self.gradient_checkpointing and self.training:
# create gradient checkpointing function
def create_custom_forward(module):
def custom_forward(*inputs):
return module(*inputs, output_attentions)
return custom_forward
layer_outputs = torch.utils.checkpoint.checkpoint(
create_custom_forward(layer),
hidden_states,
attention_mask,
)
else:
layer_outputs = layer(
hidden_states, attention_mask=attention_mask, output_attentions=output_attentions
)
hidden_states = layer_outputs[0]
if skip_the_layer:
layer_outputs = (None, None)
if output_attentions:
all_self_attentions = all_self_attentions + (layer_outputs[1],)
hidden_states = self.layer_norm(hidden_states)
if output_hidden_states:
all_hidden_states = all_hidden_states + (hidden_states,)
if not return_dict:
return tuple(v for v in [hidden_states, all_hidden_states, all_self_attentions] if v is not None)
return BaseModelOutput(
last_hidden_state=hidden_states,
hidden_states=all_hidden_states,
attentions=all_self_attentions,
)
class UniSpeechGumbelVectorQuantizer(nn.Module):
"""
Vector quantization using gumbel softmax. See [CATEGORICAL REPARAMETERIZATION WITH
GUMBEL-SOFTMAX](https://arxiv.org/pdf/1611.01144.pdf) for more information.
"""
def __init__(self, config):
super().__init__()
self.num_groups = config.num_codevector_groups
self.num_vars = config.num_codevectors_per_group
if config.codevector_dim % self.num_groups != 0:
raise ValueError(
f"`config.codevector_dim {config.codevector_dim} must be divisible by `config.num_codevector_groups`"
f" {self.num_groups} for concatenation"
)
# storage for codebook variables (codewords)
self.codevectors = nn.Parameter(
torch.FloatTensor(1, self.num_groups * self.num_vars, config.codevector_dim // self.num_groups)
)
self.weight_proj = nn.Linear(config.conv_dim[-1], self.num_groups * self.num_vars)
# can be decayed for training
self.temperature = 2
@staticmethod
def _compute_perplexity(probs):
marginal_probs = probs.mean(dim=0)
perplexity = torch.exp(-torch.sum(marginal_probs * torch.log(marginal_probs + 1e-7), dim=-1)).sum()
return perplexity
def forward(self, hidden_states):
batch_size, sequence_length, hidden_size = hidden_states.shape
# project to codevector dim
hidden_states = self.weight_proj(hidden_states)
hidden_states = hidden_states.view(batch_size * sequence_length * self.num_groups, -1)
if self.training:
# sample code vector probs via gumbel in differentiateable way
codevector_probs = nn.functional.gumbel_softmax(
hidden_states.float(), tau=self.temperature, hard=True
).type_as(hidden_states)
# compute perplexity
codevector_soft_dist = torch.softmax(
hidden_states.view(batch_size * sequence_length, self.num_groups, -1).float(), dim=-1
)
perplexity = self._compute_perplexity(codevector_soft_dist)
else:
# take argmax in non-differentiable way
# comptute hard codevector distribution (one hot)
codevector_idx = hidden_states.argmax(dim=-1)
codevector_probs = hidden_states.new_zeros(*hidden_states.shape).scatter_(
-1, codevector_idx.view(-1, 1), 1.0
)
codevector_probs = codevector_probs.view(batch_size * sequence_length, self.num_groups, -1)
perplexity = self._compute_perplexity(codevector_probs)
codevector_probs = codevector_probs.view(batch_size * sequence_length, -1)
# use probs to retrieve codevectors
codevectors_per_group = codevector_probs.unsqueeze(-1) * self.codevectors
codevectors = codevectors_per_group.view(batch_size * sequence_length, self.num_groups, self.num_vars, -1)
codevectors = codevectors.sum(-2).view(batch_size, sequence_length, -1)
return codevectors, perplexity
class UniSpeechPreTrainedModel(PreTrainedModel):
"""
An abstract class to handle weights initialization and a simple interface for downloading and loading pretrained
models.
"""
config_class = UniSpeechConfig
base_model_prefix = "unispeech"
main_input_name = "input_values"
supports_gradient_checkpointing = True
def _init_weights(self, module):
"""Initialize the weights"""
# gumbel softmax requires special init
if isinstance(module, UniSpeechGumbelVectorQuantizer):
module.weight_proj.weight.data.normal_(mean=0.0, std=1)
module.weight_proj.bias.data.zero_()
nn.init.uniform_(module.codevectors)
elif isinstance(module, UniSpeechPositionalConvEmbedding):
nn.init.normal_(
module.conv.weight,
mean=0,
std=2 * math.sqrt(1 / (module.conv.kernel_size[0] * module.conv.in_channels)),
)
nn.init.constant_(module.conv.bias, 0)
elif isinstance(module, UniSpeechFeatureProjection):
k = math.sqrt(1 / module.projection.in_features)
nn.init.uniform_(module.projection.weight, a=-k, b=k)
nn.init.uniform_(module.projection.bias, a=-k, b=k)
elif isinstance(module, nn.Linear):
module.weight.data.normal_(mean=0.0, std=self.config.initializer_range)
if module.bias is not None:
module.bias.data.zero_()
elif isinstance(module, (nn.LayerNorm, nn.GroupNorm)):
module.bias.data.zero_()
module.weight.data.fill_(1.0)
elif isinstance(module, nn.Conv1d):
nn.init.kaiming_normal_(module.weight)
if module.bias is not None:
k = math.sqrt(module.groups / (module.in_channels * module.kernel_size[0]))
nn.init.uniform_(module.bias, a=-k, b=k)
def _get_feat_extract_output_lengths(self, input_lengths: Union[torch.LongTensor, int]):
"""
Computes the output length of the convolutional layers
"""
def _conv_out_length(input_length, kernel_size, stride):
# 1D convolutional layer output length formula taken
# from https://pytorch.org/docs/stable/generated/torch.nn.Conv1d.html
return torch.div(input_length - kernel_size, stride, rounding_mode="floor") + 1
for kernel_size, stride in zip(self.config.conv_kernel, self.config.conv_stride):
input_lengths = _conv_out_length(input_lengths, kernel_size, stride)
return input_lengths
def _get_feature_vector_attention_mask(self, feature_vector_length: int, attention_mask: torch.LongTensor):
# Effectively attention_mask.sum(-1), but not inplace to be able to run
# on inference mode.
non_padded_lengths = attention_mask.cumsum(dim=-1)[:, -1]
output_lengths = self._get_feat_extract_output_lengths(non_padded_lengths).to(torch.long)
batch_size = attention_mask.shape[0]
attention_mask = torch.zeros(
(batch_size, feature_vector_length), dtype=attention_mask.dtype, device=attention_mask.device
)
# these two operations makes sure that all values before the output lengths idxs are attended to
attention_mask[(torch.arange(attention_mask.shape[0], device=attention_mask.device), output_lengths - 1)] = 1
attention_mask = attention_mask.flip([-1]).cumsum(-1).flip([-1]).bool()
return attention_mask
def _set_gradient_checkpointing(self, module, value=False):
if isinstance(module, (UniSpeechEncoder, UniSpeechEncoderStableLayerNorm, UniSpeechFeatureEncoder)):
module.gradient_checkpointing = value
UNISPEECH_START_DOCSTRING = r"""
UniSpeech was proposed in [UniSpeech: Unified Speech Representation Learning with Labeled and Unlabeled
Data](https://arxiv.org/abs/2101.07597) by Chengyi Wang, Yu Wu, Yao Qian, Kenichi Kumatani, Shujie Liu, Furu Wei,
Michael Zeng, Xuedong Huang.
This model inherits from [`PreTrainedModel`]. Check the superclass documentation for the generic methods the
library implements for all its model (such as downloading or saving etc.).
This model is a PyTorch [torch.nn.Module](https://pytorch.org/docs/stable/nn.html#torch.nn.Module) sub-class. Use
it as a regular PyTorch Module and refer to the PyTorch documentation for all matter related to general usage and
behavior.
Parameters:
config ([`UniSpeechConfig`]): Model configuration class with all the parameters of the model.
Initializing with a config file does not load the weights associated with the model, only the
configuration. Check out the [`~PreTrainedModel.from_pretrained`] method to load the model weights.
"""
UNISPEECH_INPUTS_DOCSTRING = r"""
Args:
input_values (`torch.FloatTensor` of shape `(batch_size, sequence_length)`):
Float values of input raw speech waveform. Values can be obtained by loading a `.flac` or `.wav` audio file
into an array of type `List[float]` or a `numpy.ndarray`, *e.g.* via the soundfile library (`pip install
soundfile`). To prepare the array into `input_values`, the [`AutoProcessor`] should be used for padding and
conversion into a tensor of type `torch.FloatTensor`. See [`Wav2Vec2Processor.__call__`] for details.
attention_mask (`torch.LongTensor` of shape `(batch_size, sequence_length)`, *optional*):
Mask to avoid performing convolution and attention on padding token indices. Mask values selected in `[0,
1]`:
- 1 for tokens that are **not masked**,
- 0 for tokens that are **masked**.
[What are attention masks?](../glossary#attention-mask)
<Tip warning={true}>
`attention_mask` should only be passed if the corresponding processor has `config.return_attention_mask ==
True`. For all models whose processor has `config.return_attention_mask == False`, `attention_mask` should
**not** be passed to avoid degraded performance when doing batched inference. For such models
`input_values` should simply be padded with 0 and passed without `attention_mask`. Be aware that these
models also yield slightly different results depending on whether `input_values` is padded or not.
</Tip>
output_attentions (`bool`, *optional*):
Whether or not to return the attentions tensors of all attention layers. See `attentions` under returned
tensors for more detail.
output_hidden_states (`bool`, *optional*):
Whether or not to return the hidden states of all layers. See `hidden_states` under returned tensors for
more detail.
return_dict (`bool`, *optional*):
Whether or not to return a [`~utils.ModelOutput`] instead of a plain tuple.
"""
@add_start_docstrings(
"The bare UniSpeech Model transformer outputting raw hidden-states without any specific head on top.",
UNISPEECH_START_DOCSTRING,
)
class UniSpeechModel(UniSpeechPreTrainedModel):
def __init__(self, config: UniSpeechConfig):
super().__init__(config)
self.config = config
self.feature_extractor = UniSpeechFeatureEncoder(config)
self.feature_projection = UniSpeechFeatureProjection(config)
if config.mask_time_prob > 0.0 or config.mask_feature_prob > 0.0:
self.masked_spec_embed = nn.Parameter(torch.FloatTensor(config.hidden_size).uniform_())
if config.do_stable_layer_norm:
self.encoder = UniSpeechEncoderStableLayerNorm(config)
else:
self.encoder = UniSpeechEncoder(config)
# Initialize weights and apply final processing
self.post_init()
# Copied from transformers.models.wav2vec2.modeling_wav2vec2.Wav2Vec2Model._mask_hidden_states
def _mask_hidden_states(
self,
hidden_states: torch.FloatTensor,
mask_time_indices: Optional[torch.FloatTensor] = None,
attention_mask: Optional[torch.LongTensor] = None,
):
"""
Masks extracted features along time axis and/or along feature axis according to
[SpecAugment](https://arxiv.org/abs/1904.08779).
"""
# `config.apply_spec_augment` can set masking to False
if not getattr(self.config, "apply_spec_augment", True):
return hidden_states
# generate indices & apply SpecAugment along time axis
batch_size, sequence_length, hidden_size = hidden_states.size()
if mask_time_indices is not None:
# apply SpecAugment along time axis with given mask_time_indices
hidden_states[mask_time_indices] = self.masked_spec_embed.to(hidden_states.dtype)
elif self.config.mask_time_prob > 0 and self.training:
mask_time_indices = _compute_mask_indices(
(batch_size, sequence_length),
mask_prob=self.config.mask_time_prob,
mask_length=self.config.mask_time_length,
attention_mask=attention_mask,
min_masks=self.config.mask_time_min_masks,
)
mask_time_indices = torch.tensor(mask_time_indices, device=hidden_states.device, dtype=torch.bool)
hidden_states[mask_time_indices] = self.masked_spec_embed.to(hidden_states.dtype)
if self.config.mask_feature_prob > 0 and self.training:
# generate indices & apply SpecAugment along feature axis
mask_feature_indices = _compute_mask_indices(
(batch_size, hidden_size),
mask_prob=self.config.mask_feature_prob,
mask_length=self.config.mask_feature_length,
min_masks=self.config.mask_feature_min_masks,
)
mask_feature_indices = torch.tensor(mask_feature_indices, device=hidden_states.device, dtype=torch.bool)
mask_feature_indices = mask_feature_indices[:, None].expand(-1, sequence_length, -1)
hidden_states[mask_feature_indices] = 0
return hidden_states
@add_start_docstrings_to_model_forward(UNISPEECH_INPUTS_DOCSTRING)
@add_code_sample_docstrings(
checkpoint=_CHECKPOINT_FOR_DOC,
output_type=Wav2Vec2BaseModelOutput,
config_class=_CONFIG_FOR_DOC,
modality="audio",
expected_output=_EXPECTED_OUTPUT_SHAPE,
)
def forward(
self,
input_values: Optional[torch.Tensor],
attention_mask: Optional[torch.Tensor] = None,
mask_time_indices: Optional[torch.FloatTensor] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[Tuple, Wav2Vec2BaseModelOutput]:
output_attentions = output_attentions if output_attentions is not None else self.config.output_attentions
output_hidden_states = (
output_hidden_states if output_hidden_states is not None else self.config.output_hidden_states
)
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
extract_features = self.feature_extractor(input_values)
extract_features = extract_features.transpose(1, 2)
if attention_mask is not None:
# compute reduced attention_mask corresponding to feature vectors
attention_mask = self._get_feature_vector_attention_mask(extract_features.shape[1], attention_mask)
hidden_states, extract_features = self.feature_projection(extract_features)
hidden_states = self._mask_hidden_states(
hidden_states, mask_time_indices=mask_time_indices, attention_mask=attention_mask
)
encoder_outputs = self.encoder(
hidden_states,
attention_mask=attention_mask,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
hidden_states = encoder_outputs[0]
if not return_dict:
return (hidden_states, extract_features) + encoder_outputs[1:]
return Wav2Vec2BaseModelOutput(
last_hidden_state=hidden_states,
extract_features=extract_features,
hidden_states=encoder_outputs.hidden_states,
attentions=encoder_outputs.attentions,
)
@add_start_docstrings(
"""UniSpeech Model with a vector-quantization module and ctc loss for pre-training.""", UNISPEECH_START_DOCSTRING
)
class UniSpeechForPreTraining(UniSpeechPreTrainedModel):
def __init__(self, config: UniSpeechConfig):
super().__init__(config)
self.unispeech = UniSpeechModel(config)
self.dropout_features = nn.Dropout(config.feat_quantizer_dropout)
self.quantizer = UniSpeechGumbelVectorQuantizer(config)
self.project_q = nn.Linear(config.codevector_dim, config.proj_codevector_dim)
self.project_hid = nn.Linear(config.proj_codevector_dim, config.hidden_size)
self.ctc_proj = nn.Linear(config.hidden_size, config.num_ctc_classes)
self.dropout = nn.Dropout(config.final_dropout)
# Initialize weights and apply final processing
self.post_init()
def set_gumbel_temperature(self, temperature: int):
"""
Set the Gumbel softmax temperature to a given value. Only necessary for training
"""
self.quantizer.temperature = temperature
def freeze_feature_extractor(self):
"""
Calling this function will disable the gradient computation for the feature encoder so that its parameters will
not be updated during training.
"""
warnings.warn(
"The method `freeze_feature_extractor` is deprecated and will be removed in Transformers v5."
"Please use the equivalent `freeze_feature_encoder` method instead.",
FutureWarning,
)
self.freeze_feature_encoder()
def freeze_feature_encoder(self):
"""
Calling this function will disable the gradient computation for the feature encoder so that its parameter will
not be updated during training.
"""
self.unispeech.feature_extractor._freeze_parameters()
@staticmethod
def compute_contrastive_logits(
target_features: torch.FloatTensor,
negative_features: torch.FloatTensor,
predicted_features: torch.FloatTensor,
temperature: int = 1,
):
"""
Compute logits for contrastive loss based using cosine similarity as the distance measure between
`[positive_feature, negative_features]` and `[predicted_features]`. Additionally, temperature can be applied.
"""
target_features = torch.cat([target_features, negative_features], dim=0)
logits = torch.cosine_similarity(predicted_features.float(), target_features.float(), dim=-1)
logits = logits.type_as(target_features)
# apply temperature
logits = logits / temperature
return logits
@add_start_docstrings_to_model_forward(UNISPEECH_INPUTS_DOCSTRING)
@replace_return_docstrings(output_type=UniSpeechForPreTrainingOutput, config_class=_CONFIG_FOR_DOC)
def forward(
self,
input_values: Optional[torch.Tensor],
attention_mask: Optional[torch.Tensor] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[Tuple, UniSpeechForPreTrainingOutput]:
r"""
mask_time_indices (`torch.BoolTensor` of shape `(batch_size, sequence_length)`, *optional*):
Indices to mask extracted features for contrastive loss. When in training mode, model learns to predict
masked extracted features in *config.proj_codevector_dim* space.
sampled_negative_indices (`torch.BoolTensor` of shape `(batch_size, sequence_length, num_negatives)`, *optional*):
Indices indicating which quantized target vectors are used as negative sampled vectors in contrastive loss.
Required input for pre-training.
Returns:
Example:
```python
>>> import torch
>>> from transformers import AutoFeatureExtractor, UniSpeechForPreTraining
>>> feature_extractor = AutoFeatureExtractor.from_pretrained("microsoft/unispeech-large-1500h-cv")
>>> model = UniSpeechForPreTraining.from_pretrained("microsoft/unispeech-large-1500h-cv")
>>> # TODO: Add full pretraining example
```"""
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
outputs = self.unispeech(
input_values,
attention_mask=attention_mask,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
transformer_features = outputs[0]
# quantize all (unmasked) extracted features and project to final vq dim
extract_features = self.dropout_features(outputs[1])
quantized_features, codevector_perplexity = self.quantizer(extract_features)
# project quantized features twice
quantized_features = self.project_q(quantized_features)
quantized_features = self.project_hid(quantized_features)
prob_replace_matrix = torch.empty(transformer_features.size(0), transformer_features.size(1)).fill_(
self.config.replace_prob
)
prob_replace_matrix = prob_replace_matrix.transpose(0, 1)
sampled_replace_matrix = torch.bernoulli(prob_replace_matrix).bool().to(transformer_features.device)
sampled_replace_matrix = sampled_replace_matrix.transpose(0, 1)
sampled_replace_matrix = sampled_replace_matrix.unsqueeze(-1)
logits = transformer_features.masked_fill(sampled_replace_matrix, 0.0) + (
quantized_features.masked_fill(~sampled_replace_matrix, 0.0)
)
# project to ctc units
logits = self.dropout(logits)
logits = self.ctc_proj(logits)
# TODO(PVP) - add negative sampling & loss computation
loss = None
if not return_dict:
if loss is not None:
return (loss, transformer_features, quantized_features, codevector_perplexity) + outputs[2:]
return (transformer_features, quantized_features, codevector_perplexity) + outputs[2:]
return UniSpeechForPreTrainingOutput(
loss=loss,
projected_states=transformer_features,
projected_quantized_states=quantized_features,
codevector_perplexity=codevector_perplexity,
hidden_states=outputs.hidden_states,
attentions=outputs.attentions,
)
@add_start_docstrings(
"""UniSpeech Model with a `language modeling` head on top for Connectionist Temporal Classification (CTC).""",
UNISPEECH_START_DOCSTRING,
)
# Copied from transformers.models.wav2vec2.modeling_wav2vec2.Wav2Vec2ForCTC with Wav2Vec2->UniSpeech, wav2vec2->unispeech, WAV_2_VEC_2->UNISPEECH
class UniSpeechForCTC(UniSpeechPreTrainedModel):
def __init__(self, config, target_lang: Optional[str] = None):
super().__init__(config)
self.unispeech = UniSpeechModel(config)
self.dropout = nn.Dropout(config.final_dropout)
self.target_lang = target_lang
if config.vocab_size is None:
raise ValueError(
f"You are trying to instantiate {self.__class__} with a configuration that "
"does not define the vocabulary size of the language model head. Please "
"instantiate the model as follows: `UniSpeechForCTC.from_pretrained(..., vocab_size=vocab_size)`. "
"or define `vocab_size` of your model's configuration."
)
output_hidden_size = (
config.output_hidden_size if hasattr(config, "add_adapter") and config.add_adapter else config.hidden_size
)
self.lm_head = nn.Linear(output_hidden_size, config.vocab_size)
# Initialize weights and apply final processing
self.post_init()
def tie_weights(self):
"""
This method overwrites [`~PreTrainedModel.tie_weights`] so that adapter weights can be correctly loaded when
passing `target_lang=...` to `from_pretrained(...)`.
This method is **not** supposed to be called by the user and is prone to be changed in the future.
"""
# Note that `tie_weights` is usually used to tie input and output embedding weights. The method is re-purposed to
# correctly load adapter layers for UniSpeech so that we do not have to introduce a new API to
# [`PreTrainedModel`]. While slightly hacky, UniSpeech never has to tie input and output embeddings, so that it is
# ok to repurpose this function here.
target_lang = self.target_lang
if target_lang is not None and getattr(self.config, "adapter_attn_dim", None) is None:
raise ValueError(f"Cannot pass `target_lang`: {target_lang} if `config.adapter_attn_dim` is not defined.")
elif target_lang is None and getattr(self.config, "adapter_attn_dim", None) is not None:
logger.info("By default `target_lang` is set to 'eng'.")
elif target_lang is not None:
self.load_adapter(target_lang, force_load=True)
def freeze_feature_extractor(self):
"""
Calling this function will disable the gradient computation for the feature encoder so that its parameter will
not be updated during training.
"""
warnings.warn(
"The method `freeze_feature_extractor` is deprecated and will be removed in Transformers v5."
"Please use the equivalent `freeze_feature_encoder` method instead.",
FutureWarning,
)
self.freeze_feature_encoder()
def freeze_feature_encoder(self):
"""
Calling this function will disable the gradient computation for the feature encoder so that its parameter will
not be updated during training.
"""
self.unispeech.feature_extractor._freeze_parameters()
def freeze_base_model(self):
"""
Calling this function will disable the gradient computation for the base model so that its parameters will not
be updated during training. Only the classification head will be updated.
"""
for param in self.unispeech.parameters():
param.requires_grad = False
@add_start_docstrings_to_model_forward(UNISPEECH_INPUTS_DOCSTRING)
@add_code_sample_docstrings(
checkpoint=_CHECKPOINT_FOR_DOC,
output_type=CausalLMOutput,
config_class=_CONFIG_FOR_DOC,
expected_output=_CTC_EXPECTED_OUTPUT,
expected_loss=_CTC_EXPECTED_LOSS,
)
def forward(
self,
input_values: Optional[torch.Tensor],
attention_mask: Optional[torch.Tensor] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
labels: Optional[torch.Tensor] = None,
) -> Union[Tuple, CausalLMOutput]:
r"""
labels (`torch.LongTensor` of shape `(batch_size, target_length)`, *optional*):
Labels for connectionist temporal classification. Note that `target_length` has to be smaller or equal to
the sequence length of the output logits. Indices are selected in `[-100, 0, ..., config.vocab_size - 1]`.
All labels set to `-100` are ignored (masked), the loss is only computed for labels in `[0, ...,
config.vocab_size - 1]`.
"""
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
outputs = self.unispeech(
input_values,
attention_mask=attention_mask,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
hidden_states = outputs[0]
hidden_states = self.dropout(hidden_states)
logits = self.lm_head(hidden_states)
loss = None
if labels is not None:
if labels.max() >= self.config.vocab_size:
raise ValueError(f"Label values must be <= vocab_size: {self.config.vocab_size}")
# retrieve loss input_lengths from attention_mask
attention_mask = (
attention_mask if attention_mask is not None else torch.ones_like(input_values, dtype=torch.long)
)
input_lengths = self._get_feat_extract_output_lengths(attention_mask.sum(-1)).to(torch.long)
# assuming that padded tokens are filled with -100
# when not being attended to
labels_mask = labels >= 0
target_lengths = labels_mask.sum(-1)
flattened_targets = labels.masked_select(labels_mask)
# ctc_loss doesn't support fp16
log_probs = nn.functional.log_softmax(logits, dim=-1, dtype=torch.float32).transpose(0, 1)
with torch.backends.cudnn.flags(enabled=False):
loss = nn.functional.ctc_loss(
log_probs,
flattened_targets,
input_lengths,
target_lengths,
blank=self.config.pad_token_id,
reduction=self.config.ctc_loss_reduction,
zero_infinity=self.config.ctc_zero_infinity,
)
if not return_dict:
output = (logits,) + outputs[_HIDDEN_STATES_START_POSITION:]
return ((loss,) + output) if loss is not None else output
return CausalLMOutput(
loss=loss, logits=logits, hidden_states=outputs.hidden_states, attentions=outputs.attentions
)
@add_start_docstrings(
"""
UniSpeech Model with a sequence classification head on top (a linear layer over the pooled output) for tasks like
SUPERB Keyword Spotting.
""",
UNISPEECH_START_DOCSTRING,
)
class UniSpeechForSequenceClassification(UniSpeechPreTrainedModel):
def __init__(self, config):
super().__init__(config)
if hasattr(config, "add_adapter") and config.add_adapter:
raise ValueError(
"Sequence classification does not support the use of UniSpeech adapters (config.add_adapter=True)"
)
self.unispeech = UniSpeechModel(config)
num_layers = config.num_hidden_layers + 1 # transformer layers + input embeddings
if config.use_weighted_layer_sum:
self.layer_weights = nn.Parameter(torch.ones(num_layers) / num_layers)
self.projector = nn.Linear(config.hidden_size, config.classifier_proj_size)
self.classifier = nn.Linear(config.classifier_proj_size, config.num_labels)
# Initialize weights and apply final processing
self.post_init()
# Copied from transformers.models.wav2vec2.modeling_wav2vec2.Wav2Vec2ForSequenceClassification.freeze_feature_extractor
def freeze_feature_extractor(self):
"""
Calling this function will disable the gradient computation for the feature encoder so that its parameters will
not be updated during training.
"""
warnings.warn(
"The method `freeze_feature_extractor` is deprecated and will be removed in Transformers v5."
"Please use the equivalent `freeze_feature_encoder` method instead.",
FutureWarning,
)
self.freeze_feature_encoder()
# Copied from transformers.models.wav2vec2.modeling_wav2vec2.Wav2Vec2ForSequenceClassification.freeze_feature_encoder with wav2vec2->unispeech
def freeze_feature_encoder(self):
"""
Calling this function will disable the gradient computation for the feature encoder so that its parameter will
not be updated during training.
"""
self.unispeech.feature_extractor._freeze_parameters()
# Copied from transformers.models.wav2vec2.modeling_wav2vec2.Wav2Vec2ForSequenceClassification.freeze_base_model with wav2vec2->unispeech
def freeze_base_model(self):
"""
Calling this function will disable the gradient computation for the base model so that its parameters will not
be updated during training. Only the classification head will be updated.
"""
for param in self.unispeech.parameters():
param.requires_grad = False
@add_start_docstrings_to_model_forward(UNISPEECH_INPUTS_DOCSTRING)
@add_code_sample_docstrings(
checkpoint=_CHECKPOINT_FOR_DOC,
output_type=SequenceClassifierOutput,
config_class=_CONFIG_FOR_DOC,
modality="audio",
)
# Copied from transformers.models.wav2vec2.modeling_wav2vec2.Wav2Vec2ForSequenceClassification.forward with Wav2Vec2->UniSpeech, wav2vec2->unispeech
def forward(
self,
input_values: Optional[torch.Tensor],
attention_mask: Optional[torch.Tensor] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
labels: Optional[torch.Tensor] = None,
) -> Union[Tuple, SequenceClassifierOutput]:
r"""
labels (`torch.LongTensor` of shape `(batch_size,)`, *optional*):
Labels for computing the sequence classification/regression loss. Indices should be in `[0, ...,
config.num_labels - 1]`. If `config.num_labels == 1` a regression loss is computed (Mean-Square loss), If
`config.num_labels > 1` a classification loss is computed (Cross-Entropy).
"""
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
output_hidden_states = True if self.config.use_weighted_layer_sum else output_hidden_states
outputs = self.unispeech(
input_values,
attention_mask=attention_mask,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
if self.config.use_weighted_layer_sum:
hidden_states = outputs[_HIDDEN_STATES_START_POSITION]
hidden_states = torch.stack(hidden_states, dim=1)
norm_weights = nn.functional.softmax(self.layer_weights, dim=-1)
hidden_states = (hidden_states * norm_weights.view(-1, 1, 1)).sum(dim=1)
else:
hidden_states = outputs[0]
hidden_states = self.projector(hidden_states)
if attention_mask is None:
pooled_output = hidden_states.mean(dim=1)
else:
padding_mask = self._get_feature_vector_attention_mask(hidden_states.shape[1], attention_mask)
hidden_states[~padding_mask] = 0.0
pooled_output = hidden_states.sum(dim=1) / padding_mask.sum(dim=1).view(-1, 1)
logits = self.classifier(pooled_output)
loss = None
if labels is not None:
loss_fct = CrossEntropyLoss()
loss = loss_fct(logits.view(-1, self.config.num_labels), labels.view(-1))
if not return_dict:
output = (logits,) + outputs[_HIDDEN_STATES_START_POSITION:]
return ((loss,) + output) if loss is not None else output
return SequenceClassifierOutput(
loss=loss,
logits=logits,
hidden_states=outputs.hidden_states,
attentions=outputs.attentions,
)
| 73,175 | 43.241838 | 159 | py |
transformers | transformers-main/src/transformers/models/unispeech/__init__.py | # Copyright 2021 The HuggingFace Team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
from typing import TYPE_CHECKING
from ...utils import (
OptionalDependencyNotAvailable,
_LazyModule,
is_flax_available,
is_tf_available,
is_torch_available,
)
_import_structure = {"configuration_unispeech": ["UNISPEECH_PRETRAINED_CONFIG_ARCHIVE_MAP", "UniSpeechConfig"]}
try:
if not is_torch_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
_import_structure["modeling_unispeech"] = [
"UNISPEECH_PRETRAINED_MODEL_ARCHIVE_LIST",
"UniSpeechForCTC",
"UniSpeechForPreTraining",
"UniSpeechForSequenceClassification",
"UniSpeechModel",
"UniSpeechPreTrainedModel",
]
if TYPE_CHECKING:
from .configuration_unispeech import UNISPEECH_PRETRAINED_CONFIG_ARCHIVE_MAP, UniSpeechConfig
try:
if not is_torch_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
from .modeling_unispeech import (
UNISPEECH_PRETRAINED_MODEL_ARCHIVE_LIST,
UniSpeechForCTC,
UniSpeechForPreTraining,
UniSpeechForSequenceClassification,
UniSpeechModel,
UniSpeechPreTrainedModel,
)
else:
import sys
sys.modules[__name__] = _LazyModule(__name__, globals()["__file__"], _import_structure, module_spec=__spec__)
| 2,018 | 30.546875 | 113 | py |
transformers | transformers-main/src/transformers/models/nllb/__init__.py | # Copyright 2022 The HuggingFace Team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
from typing import TYPE_CHECKING
from ...utils import (
OptionalDependencyNotAvailable,
_LazyModule,
is_sentencepiece_available,
is_tokenizers_available,
is_torch_available,
)
_import_structure = {}
try:
if not is_sentencepiece_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
_import_structure["tokenization_nllb"] = ["NllbTokenizer"]
try:
if not is_tokenizers_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
_import_structure["tokenization_nllb_fast"] = ["NllbTokenizerFast"]
if TYPE_CHECKING:
try:
if not is_sentencepiece_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
from .tokenization_nllb import NllbTokenizer
try:
if not is_tokenizers_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
from .tokenization_nllb_fast import NllbTokenizerFast
else:
import sys
sys.modules[__name__] = _LazyModule(__name__, globals()["__file__"], _import_structure, module_spec=__spec__)
| 1,868 | 27.753846 | 113 | py |
transformers | transformers-main/src/transformers/models/wav2vec2_phoneme/tokenization_wav2vec2_phoneme.py | # coding=utf-8
# Copyright 2021 The Facebook Inc. and The HuggingFace Inc. team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
"""Tokenization class for Wav2Vec2Phoneme."""
import json
import os
import sys
from dataclasses import dataclass
from itertools import groupby
from typing import TYPE_CHECKING, Any, Dict, List, Optional, Tuple, Union
import numpy as np
from ...tokenization_utils import PreTrainedTokenizer, _insert_one_token_to_ordered_list
from ...tokenization_utils_base import AddedToken
from ...utils import (
ModelOutput,
is_flax_available,
is_tf_available,
is_torch_available,
logging,
requires_backends,
to_py_obj,
)
logger = logging.get_logger(__name__)
if TYPE_CHECKING:
if is_torch_available():
import torch
if is_tf_available():
import tensorflow as tf
if is_flax_available():
import jax.numpy as jnp # noqa: F401
VOCAB_FILES_NAMES = {
"vocab_file": "vocab.json",
"tokenizer_config_file": "tokenizer_config.json",
}
PRETRAINED_VOCAB_FILES_MAP = {
"vocab_file": {
"facebook/wav2vec2-lv-60-espeak-cv-ft": (
"https://huggingface.co/facebook/wav2vec2-lv-60-espeak-cv-ft/resolve/main/vocab.json"
),
},
"tokenizer_config_file": {
"facebook/wav2vec2-lv-60-espeak-cv-ft": (
"https://huggingface.co/facebook/wav2vec2-lv-60-espeak-cv-ft/resolve/main/tokenizer_config.json"
),
},
}
# Wav2Vec2Phoneme has no max input length
PRETRAINED_POSITIONAL_EMBEDDINGS_SIZES = {"facebook/wav2vec2-lv-60-espeak-cv-ft": sys.maxsize}
ListOfDict = List[Dict[str, Union[int, str]]]
@dataclass
class Wav2Vec2PhonemeCTCTokenizerOutput(ModelOutput):
"""
Output type of [` Wav2Vec2PhonemeCTCTokenizer`], with transcription.
Args:
text (list of `str` or `str`):
Decoded logits in text from. Usually the speech transcription.
char_offsets (list of `List[Dict[str, Union[int, str]]]` or `List[Dict[str, Union[int, str]]]`):
Offsets of the decoded characters. In combination with sampling rate and model downsampling rate char
offsets can be used to compute time stamps for each charater. Total logit score of the beam associated with
produced text.
"""
text: Union[List[str], str]
char_offsets: Union[List[ListOfDict], ListOfDict] = None
class Wav2Vec2PhonemeCTCTokenizer(PreTrainedTokenizer):
"""
Constructs a Wav2Vec2PhonemeCTC tokenizer.
This tokenizer inherits from [`PreTrainedTokenizer`] which contains some of the main methods. Users should refer to
the superclass for more information regarding such methods.
Args:
vocab_file (`str`):
File containing the vocabulary.
bos_token (`str`, *optional*, defaults to `"<s>"`):
The beginning of sentence token.
eos_token (`str`, *optional*, defaults to `"</s>"`):
The end of sentence token.
unk_token (`str`, *optional*, defaults to `"<unk>"`):
The unknown token. A token that is not in the vocabulary cannot be converted to an ID and is set to be this
token instead.
pad_token (`str`, *optional*, defaults to `"<pad>"`):
The token used for padding, for example when batching sequences of different lengths.
do_phonemize (`bool`, *optional*, defaults to `True`):
Whether the tokenizer should phonetize the input or not. Only if a sequence of phonemes is passed to the
tokenizer, `do_phonemize` should be set to `False`.
phonemizer_lang (`str`, *optional*, defaults to `"en-us"`):
The language of the phoneme set to which the tokenizer should phonetize the input text to.
phonemizer_backend (`str`, *optional*. defaults to `"espeak"`):
The backend phonetization library that shall be used by the phonemizer library. Defaults to `espeak-ng`.
See the [phonemizer package](https://github.com/bootphon/phonemizer#readme). for more information.
**kwargs
Additional keyword arguments passed along to [`PreTrainedTokenizer`]
"""
vocab_files_names = VOCAB_FILES_NAMES
pretrained_vocab_files_map = PRETRAINED_VOCAB_FILES_MAP
max_model_input_sizes = PRETRAINED_POSITIONAL_EMBEDDINGS_SIZES
model_input_names = ["input_ids", "attention_mask"]
def __init__(
self,
vocab_file,
bos_token="<s>",
eos_token="</s>",
unk_token="<unk>",
pad_token="<pad>",
phone_delimiter_token=" ",
word_delimiter_token=None,
do_phonemize=True,
phonemizer_lang="en-us",
phonemizer_backend="espeak",
**kwargs,
):
super().__init__(
unk_token=unk_token,
bos_token=bos_token,
eos_token=eos_token,
pad_token=pad_token,
word_delimiter_token=word_delimiter_token,
phone_delimiter_token=phone_delimiter_token,
do_phonemize=do_phonemize,
phonemizer_lang=phonemizer_lang,
phonemizer_backend=phonemizer_backend,
**kwargs,
)
self._word_delimiter_token = word_delimiter_token
self._phone_delimiter_token = phone_delimiter_token
self.do_phonemize = do_phonemize
self.phonemizer_lang = phonemizer_lang
self.phonemizer_backend = phonemizer_backend
if do_phonemize:
self.init_backend(self.phonemizer_lang)
with open(vocab_file, encoding="utf-8") as vocab_handle:
self.encoder = json.load(vocab_handle)
self.decoder = {v: k for k, v in self.encoder.items()}
@property
def vocab_size(self) -> int:
return len(self.decoder)
def get_vocab(self) -> Dict:
return dict(self.encoder, **self.added_tokens_encoder)
def init_backend(self, phonemizer_lang: str):
"""
Initializes the backend.
Args:
phonemizer_lang (`str`): The language to be used.
"""
requires_backends(self, "phonemizer")
from phonemizer.backend import BACKENDS
self.backend = BACKENDS[self.phonemizer_backend](phonemizer_lang, language_switch="remove-flags")
def prepare_for_tokenization(
self,
text: str,
is_split_into_words: bool = False,
phonemizer_lang: Optional[str] = None,
do_phonemize: Optional[bool] = None,
) -> Tuple[str, Dict[str, Any]]:
"""
Performs any necessary transformations before tokenization.
This method should pop the arguments from kwargs and return the remaining `kwargs` as well. We test the
`kwargs` at the end of the encoding process to be sure all the arguments have been used.
Args:
text (`str`):
The text to prepare.
is_split_into_words (`bool`, *optional*, defaults to `False`):
Whether or not the input is already pre-tokenized (e.g., split into words). If set to `True`, the
tokenizer assumes the input is already split into words (for instance, by splitting it on whitespace)
which it will tokenize. This is useful for NER or token classification.
phonemizer_lang (`str`, *optional*):
The language of the phoneme set to which the tokenizer should phonetize the input text to.
do_phonemize (`bool`, *optional*):
Whether the tokenizer should phonetize the input text or not. Only if a sequence of phonemes is passed
to the tokenizer, `do_phonemize` should be set to `False`.
Returns:
`Tuple[str, Dict[str, Any]]`: The prepared text and the unused kwargs.
"""
if is_split_into_words:
text = " " + text
# set whether tokenizer should phonemize or not
if do_phonemize is not None:
self.do_phonemize = do_phonemize
# set the correct phonemizer language
if phonemizer_lang is not None:
self.phonemizer_lang = phonemizer_lang
self.init_backend(phonemizer_lang)
return (text, {})
def _tokenize(self, text, **kwargs):
"""
Converts a string in a sequence of tokens (string), using the tokenizer.
"""
# make sure whitespace is stripped to prevent <unk>
text = text.strip()
# phonemize
if self.do_phonemize:
text = text.lower()
# create list of phonemes
text = self.phonemize(text, self.phonemizer_lang)
# make sure ' ' is between phonemes
tokens = text.split(" ")
tokens = list(filter(lambda p: p.strip() != "", tokens))
return tokens
def phonemize(self, text: str, phonemizer_lang: Optional[str] = None) -> str:
from phonemizer.separator import Separator
word_delimiter = self.word_delimiter_token + " " if self.word_delimiter_token is not None else ""
if phonemizer_lang is not None and phonemizer_lang != self.phonemizer_lang:
self.init_backend(phonemizer_lang)
else:
phonemizer_lang = self.phonemizer_lang
separator = Separator(phone=self.phone_delimiter_token, word=word_delimiter, syllable="")
phonemes = self.backend.phonemize(
[text],
separator=separator,
)
phonemes = phonemes[0].strip()
return phonemes
@property
def word_delimiter_token(self) -> str:
"""
`str`: Word delimiter token. Log an error if used while not having been set.
"""
if self._word_delimiter_token is None and self.verbose:
return None
return str(self._word_delimiter_token)
@property
def word_delimiter_token_id(self) -> Optional[int]:
"""
`Optional[int]`: Id of the word_delimiter_token in the vocabulary. Returns `None` if the token has not been
set.
"""
if self._word_delimiter_token is None:
return None
return self.convert_tokens_to_ids(self.word_delimiter_token)
@word_delimiter_token.setter
def word_delimiter_token(self, value):
self._word_delimiter_token = value
@word_delimiter_token_id.setter
def word_delimiter_token_id(self, value):
self._word_delimiter_token = self.convert_tokens_to_ids(value)
@property
def phone_delimiter_token(self) -> str:
"""
`str`: Word delimiter token. Log an error if used while not having been set.
"""
if self._phone_delimiter_token is None and self.verbose:
logger.error("Using phone_delimiter_token, but it is not set yet.")
return None
return str(self._phone_delimiter_token)
@property
def phone_delimiter_token_id(self) -> Optional[int]:
"""
`Optional[int]`: Id of the phone_delimiter_token in the vocabulary. Returns `None` if the token has not been
set.
"""
if self._phone_delimiter_token is None:
return None
return self.convert_tokens_to_ids(self.phone_delimiter_token)
@phone_delimiter_token.setter
def phone_delimiter_token(self, value):
self._phone_delimiter_token = value
@phone_delimiter_token_id.setter
def phone_delimiter_token_id(self, value):
self._phone_delimiter_token = self.convert_tokens_to_ids(value)
def _convert_token_to_id(self, token: str) -> int:
"""Converts a token (str) in an index (integer) using the vocab."""
return self.encoder.get(token, self.encoder.get(self.unk_token))
def _convert_id_to_token(self, index: int) -> str:
"""Converts an index (integer) in a token (str) using the vocab."""
result = self.decoder.get(index, self.unk_token)
return result
def convert_tokens_to_string(
self,
tokens: List[str],
group_tokens: bool = True,
spaces_between_special_tokens: bool = False,
filter_word_delimiter_token: bool = True,
output_char_offsets: bool = False,
) -> str:
"""
Converts a connectionist-temporal-classification (CTC) output tokens into a single string.
"""
# group same tokens into non-repeating tokens in CTC style decoding
if group_tokens:
chars, char_repetitions = zip(*((token, len(list(group_iter))) for token, group_iter in groupby(tokens)))
else:
chars = tokens
char_repetitions = len(tokens) * [1]
# filter self.pad_token which is used as CTC-blank token
processed_chars = list(filter(lambda char: char != self.pad_token, chars))
# also filter self.word_delimiter_token if not not
if filter_word_delimiter_token and self.word_delimiter_token is not None:
processed_chars = list(filter(lambda token: token != self.word_delimiter_token, processed_chars))
# retrieve offsets
char_offsets = None
if output_char_offsets:
word_delimiter_token_for_offsets = (
self.word_delimiter_token if filter_word_delimiter_token is True else None
)
char_offsets = self._compute_offsets(
char_repetitions, chars, self.pad_token, word_delimiter_token=word_delimiter_token_for_offsets
)
if len(char_offsets) != len(processed_chars):
raise ValueError(
f"`char_offsets`: {char_offsets} and `processed_tokens`: {processed_chars}"
" have to be of the same length, but are: `len(offsets)`: "
f"{len(char_offsets)} and `len(processed_tokens)`: {len(processed_chars)}"
)
# set tokens to correct processed token
for i, char in enumerate(processed_chars):
char_offsets[i]["char"] = char
string = " ".join(processed_chars).strip()
return {"text": string, "char_offsets": char_offsets}
@staticmethod
def _compute_offsets(
char_repetitions: List[int], chars: List[str], ctc_token: int, word_delimiter_token: Optional[int] = None
) -> List[Dict[str, Union[str, int]]]:
end_indices = np.asarray(char_repetitions).cumsum()
start_indices = np.concatenate(([0], end_indices[:-1]))
offsets = [
{"char": t, "start_offset": s, "end_offset": e} for t, s, e in zip(chars, start_indices, end_indices)
]
# filter out CTC token
offsets = list(filter(lambda offsets: offsets["char"] != ctc_token, offsets))
# filter out word delimiter token if necessary
if word_delimiter_token is not None:
offsets = list(filter(lambda offsets: offsets["char"] != word_delimiter_token, offsets))
return offsets
def _decode(
self,
token_ids: List[int],
skip_special_tokens: bool = False,
clean_up_tokenization_spaces: bool = None,
group_tokens: bool = True,
filter_word_delimiter_token: bool = True,
spaces_between_special_tokens: bool = False,
output_char_offsets: bool = False,
) -> str:
"""
special _decode function is needed for Wav2Vec2PhonemeTokenizer because added tokens should be treated exactly
the same as tokens of the base vocabulary and therefore the function `convert_tokens_to_string` has to be
called on the whole token list and not individually on added tokens
"""
filtered_tokens = self.convert_ids_to_tokens(token_ids, skip_special_tokens=skip_special_tokens)
result = []
for token in filtered_tokens:
if skip_special_tokens and token in self.all_special_ids:
continue
result.append(token)
string_output = self.convert_tokens_to_string(
result,
group_tokens=group_tokens,
spaces_between_special_tokens=spaces_between_special_tokens,
filter_word_delimiter_token=filter_word_delimiter_token,
output_char_offsets=output_char_offsets,
)
text = string_output["text"]
clean_up_tokenization_spaces = (
clean_up_tokenization_spaces
if clean_up_tokenization_spaces is not None
else self.clean_up_tokenization_spaces
)
if clean_up_tokenization_spaces:
text = self.clean_up_tokenization(text)
if output_char_offsets:
return Wav2Vec2PhonemeCTCTokenizerOutput(text=text, char_offsets=string_output["char_offsets"])
else:
return text
# overwritten from `tokenization_utils_base.py` because we need docs for `output_char_offsets` here
def decode(
self,
token_ids: Union[int, List[int], "np.ndarray", "torch.Tensor", "tf.Tensor"],
skip_special_tokens: bool = False,
clean_up_tokenization_spaces: bool = None,
output_char_offsets: bool = False,
**kwargs,
) -> str:
"""
Converts a sequence of ids in a string, using the tokenizer and vocabulary with options to remove special
tokens and clean up tokenization spaces.
Similar to doing `self.convert_tokens_to_string(self.convert_ids_to_tokens(token_ids))`.
Args:
token_ids (`Union[int, List[int], np.ndarray, torch.Tensor, tf.Tensor]`):
List of tokenized input ids. Can be obtained using the `__call__` method.
skip_special_tokens (`bool`, *optional*, defaults to `False`):
Whether or not to remove special tokens in the decoding.
clean_up_tokenization_spaces (`bool`, *optional*):
Whether or not to clean up the tokenization spaces.
output_char_offsets (`bool`, *optional*, defaults to `False`):
Whether or not to output character offsets. Character offsets can be used in combination with the
sampling rate and model downsampling rate to compute the time-stamps of transcribed characters.
<Tip>
Please take a look at the Example of [`~models.wav2vec2.tokenization_wav2vec2.decode`] to better
understand how to make use of `output_word_offsets`.
[`~model.wav2vec2_phoneme.tokenization_wav2vec2_phoneme.batch_decode`] works the same way with
phonemes.
</Tip>
kwargs (additional keyword arguments, *optional*):
Will be passed to the underlying model specific decode method.
Returns:
`str` or [`~models.wav2vec2.tokenization_wav2vec2_phoneme.Wav2Vec2PhonemeCTCTokenizerOutput`]: The decoded
sentence. Will be a [`~models.wav2vec2.tokenization_wav2vec2_phoneme.Wav2Vec2PhonemeCTCTokenizerOutput`]
when `output_char_offsets == True`.
"""
# Convert inputs to python lists
token_ids = to_py_obj(token_ids)
return self._decode(
token_ids=token_ids,
skip_special_tokens=skip_special_tokens,
clean_up_tokenization_spaces=clean_up_tokenization_spaces,
output_char_offsets=output_char_offsets,
**kwargs,
)
# overwritten from `tokenization_utils_base.py` because tokenizer can output
# `ModelOutput` which should not be a list for batched output and because
# we need docs for `output_char_offsets` here
def batch_decode(
self,
sequences: Union[List[int], List[List[int]], "np.ndarray", "torch.Tensor", "tf.Tensor"],
skip_special_tokens: bool = False,
clean_up_tokenization_spaces: bool = None,
output_char_offsets: bool = False,
**kwargs,
) -> List[str]:
"""
Convert a list of lists of token ids into a list of strings by calling decode.
Args:
sequences (`Union[List[int], List[List[int]], np.ndarray, torch.Tensor, tf.Tensor]`):
List of tokenized input ids. Can be obtained using the `__call__` method.
skip_special_tokens (`bool`, *optional*, defaults to `False`):
Whether or not to remove special tokens in the decoding.
clean_up_tokenization_spaces (`bool`, *optional*):
Whether or not to clean up the tokenization spaces.
output_char_offsets (`bool`, *optional*, defaults to `False`):
Whether or not to output character offsets. Character offsets can be used in combination with the
sampling rate and model downsampling rate to compute the time-stamps of transcribed characters.
<Tip>
Please take a look at the Example of [`~models.wav2vec2.tokenization_wav2vec2.decode`] to better
understand how to make use of `output_word_offsets`.
[`~model.wav2vec2_phoneme.tokenization_wav2vec2_phoneme.batch_decode`] works analogous with phonemes
and batched output.
</Tip>
kwargs (additional keyword arguments, *optional*):
Will be passed to the underlying model specific decode method.
Returns:
`List[str]` or [`~models.wav2vec2.tokenization_wav2vec2_phoneme.Wav2Vec2PhonemeCTCTokenizerOutput`]: The
decoded sentence. Will be a
[`~models.wav2vec2.tokenization_wav2vec2_phoneme.Wav2Vec2PhonemeCTCTokenizerOutput`] when
`output_char_offsets == True`.
"""
batch_decoded = [
self.decode(
seq,
skip_special_tokens=skip_special_tokens,
clean_up_tokenization_spaces=clean_up_tokenization_spaces,
output_char_offsets=output_char_offsets,
**kwargs,
)
for seq in sequences
]
if output_char_offsets:
# transform list of dicts to dict of lists
return Wav2Vec2PhonemeCTCTokenizerOutput({k: [d[k] for d in batch_decoded] for k in batch_decoded[0]})
return batch_decoded
def save_vocabulary(self, save_directory: str, filename_prefix: Optional[str] = None) -> Tuple[str]:
if not os.path.isdir(save_directory):
logger.error(f"Vocabulary path ({save_directory}) should be a directory")
return
vocab_file = os.path.join(
save_directory, (filename_prefix + "-" if filename_prefix else "") + VOCAB_FILES_NAMES["vocab_file"]
)
with open(vocab_file, "w", encoding="utf-8") as f:
f.write(json.dumps(self.encoder, indent=2, sort_keys=True, ensure_ascii=False) + "\n")
return (vocab_file,)
def _add_tokens(self, new_tokens: Union[List[str], List[AddedToken]], special_tokens: bool = False) -> int:
"""
Add a list of new tokens to the tokenizer class. If the new tokens are not in the vocabulary, they are added to
it with indices starting from length of the current vocabulary.
Args:
new_tokens (`List[str]`or `List[tokenizers.AddedToken]`):
Token(s) to add in vocabulary. A token is only added if it's not already in the vocabulary (tested by
checking if the tokenizer assign the index of the `unk_token` to them).
special_tokens (`bool`, *optional*, defaults to `False`):
Whether or not the tokens should be added as special tokens.
Returns:
`int`: The number of tokens actually added to the vocabulary.
Examples:
```python
# Let's see how to increase the vocabulary of Bert model and tokenizer
tokenizer = Wav2Vec2PhonemeCTCTokenizer.from_pretrained("facebook/wav2vec2-lv-60-espeak-cv-ft")
model = Wav2Vec2PhonemeForCTC.from_pretrained("facebook/wav2vec2-lv-60-espeak-cv-ft")
num_added_toks = tokenizer.add_tokens(["new_tok1", "my_new-tok2"])
print("We have added", num_added_toks, "tokens")
# Note: resize_token_embeddings expects to receive the full size of the new vocabulary, i.e. the length of the tokenizer.
model.resize_token_embeddings(len(tokenizer))
```"""
new_tokens = [str(tok) for tok in new_tokens]
tokens_to_add = []
for token in new_tokens:
if not isinstance(token, str):
raise ValueError(f"Token {token} has to be of type string, but is of type {type(token)}.")
assert isinstance(token, str)
if (
token != self.unk_token
and self.convert_tokens_to_ids(token) == self.convert_tokens_to_ids(self.unk_token)
and token not in tokens_to_add
):
tokens_to_add.append(token)
if self.verbose:
logger.info(f"Adding {token} to the vocabulary")
added_tok_encoder = {tok: len(self) + i for i, tok in enumerate(tokens_to_add)}
added_tok_decoder = {v: k for k, v in added_tok_encoder.items()}
self.added_tokens_encoder.update(added_tok_encoder)
self.added_tokens_decoder.update(added_tok_decoder)
# Make sure we don't split on any special tokens (even they were already in the vocab before)
for token in tokens_to_add:
if len(token) > 1:
self._additional_special_tokens.append(AddedToken(token))
_insert_one_token_to_ordered_list(self.unique_no_split_tokens, token)
self._create_trie(self.unique_no_split_tokens)
return len(tokens_to_add)
| 26,089 | 39.957614 | 129 | py |
transformers | transformers-main/src/transformers/models/mpnet/modeling_mpnet.py | # coding=utf-8
# Copyright 2018 The HuggingFace Inc. team, Microsoft Corporation.
# Copyright (c) 2018, NVIDIA CORPORATION. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
"""PyTorch MPNet model."""
import math
from typing import Optional, Tuple, Union
import torch
from torch import nn
from torch.nn import BCEWithLogitsLoss, CrossEntropyLoss, MSELoss
from ...activations import ACT2FN, gelu
from ...modeling_outputs import (
BaseModelOutput,
BaseModelOutputWithPooling,
MaskedLMOutput,
MultipleChoiceModelOutput,
QuestionAnsweringModelOutput,
SequenceClassifierOutput,
TokenClassifierOutput,
)
from ...modeling_utils import PreTrainedModel
from ...pytorch_utils import find_pruneable_heads_and_indices, prune_linear_layer
from ...utils import add_code_sample_docstrings, add_start_docstrings, add_start_docstrings_to_model_forward, logging
from .configuration_mpnet import MPNetConfig
logger = logging.get_logger(__name__)
_CHECKPOINT_FOR_DOC = "microsoft/mpnet-base"
_CONFIG_FOR_DOC = "MPNetConfig"
MPNET_PRETRAINED_MODEL_ARCHIVE_LIST = [
"microsoft/mpnet-base",
]
class MPNetPreTrainedModel(PreTrainedModel):
config_class = MPNetConfig
pretrained_model_archive_map = MPNET_PRETRAINED_MODEL_ARCHIVE_LIST
base_model_prefix = "mpnet"
def _init_weights(self, module):
"""Initialize the weights"""
if isinstance(module, nn.Linear):
# Slightly different from the TF version which uses truncated_normal for initialization
# cf https://github.com/pytorch/pytorch/pull/5617
module.weight.data.normal_(mean=0.0, std=self.config.initializer_range)
if module.bias is not None:
module.bias.data.zero_()
elif isinstance(module, nn.Embedding):
module.weight.data.normal_(mean=0.0, std=self.config.initializer_range)
if module.padding_idx is not None:
module.weight.data[module.padding_idx].zero_()
elif isinstance(module, nn.LayerNorm):
module.bias.data.zero_()
module.weight.data.fill_(1.0)
class MPNetEmbeddings(nn.Module):
def __init__(self, config):
super().__init__()
self.padding_idx = 1
self.word_embeddings = nn.Embedding(config.vocab_size, config.hidden_size, padding_idx=self.padding_idx)
self.position_embeddings = nn.Embedding(
config.max_position_embeddings, config.hidden_size, padding_idx=self.padding_idx
)
self.LayerNorm = nn.LayerNorm(config.hidden_size, eps=config.layer_norm_eps)
self.dropout = nn.Dropout(config.hidden_dropout_prob)
self.register_buffer(
"position_ids", torch.arange(config.max_position_embeddings).expand((1, -1)), persistent=False
)
def forward(self, input_ids=None, position_ids=None, inputs_embeds=None, **kwargs):
if position_ids is None:
if input_ids is not None:
position_ids = create_position_ids_from_input_ids(input_ids, self.padding_idx)
else:
position_ids = self.create_position_ids_from_inputs_embeds(inputs_embeds)
if input_ids is not None:
input_shape = input_ids.size()
else:
input_shape = inputs_embeds.size()[:-1]
seq_length = input_shape[1]
if position_ids is None:
position_ids = self.position_ids[:, :seq_length]
if inputs_embeds is None:
inputs_embeds = self.word_embeddings(input_ids)
position_embeddings = self.position_embeddings(position_ids)
embeddings = inputs_embeds + position_embeddings
embeddings = self.LayerNorm(embeddings)
embeddings = self.dropout(embeddings)
return embeddings
def create_position_ids_from_inputs_embeds(self, inputs_embeds):
"""
We are provided embeddings directly. We cannot infer which are padded so just generate sequential position ids.
Args:
inputs_embeds: torch.Tensor
Returns: torch.Tensor
"""
input_shape = inputs_embeds.size()[:-1]
sequence_length = input_shape[1]
position_ids = torch.arange(
self.padding_idx + 1, sequence_length + self.padding_idx + 1, dtype=torch.long, device=inputs_embeds.device
)
return position_ids.unsqueeze(0).expand(input_shape)
class MPNetSelfAttention(nn.Module):
def __init__(self, config):
super().__init__()
if config.hidden_size % config.num_attention_heads != 0 and not hasattr(config, "embedding_size"):
raise ValueError(
f"The hidden size ({config.hidden_size}) is not a multiple of the number of attention "
f"heads ({config.num_attention_heads})"
)
self.num_attention_heads = config.num_attention_heads
self.attention_head_size = int(config.hidden_size / config.num_attention_heads)
self.all_head_size = self.num_attention_heads * self.attention_head_size
self.q = nn.Linear(config.hidden_size, self.all_head_size)
self.k = nn.Linear(config.hidden_size, self.all_head_size)
self.v = nn.Linear(config.hidden_size, self.all_head_size)
self.o = nn.Linear(config.hidden_size, config.hidden_size)
self.dropout = nn.Dropout(config.attention_probs_dropout_prob)
def transpose_for_scores(self, x):
new_x_shape = x.size()[:-1] + (self.num_attention_heads, self.attention_head_size)
x = x.view(*new_x_shape)
return x.permute(0, 2, 1, 3)
def forward(
self,
hidden_states,
attention_mask=None,
head_mask=None,
position_bias=None,
output_attentions=False,
**kwargs,
):
q = self.q(hidden_states)
k = self.k(hidden_states)
v = self.v(hidden_states)
q = self.transpose_for_scores(q)
k = self.transpose_for_scores(k)
v = self.transpose_for_scores(v)
# Take the dot product between "query" and "key" to get the raw attention scores.
attention_scores = torch.matmul(q, k.transpose(-1, -2))
attention_scores = attention_scores / math.sqrt(self.attention_head_size)
# Apply relative position embedding (precomputed in MPNetEncoder) if provided.
if position_bias is not None:
attention_scores += position_bias
if attention_mask is not None:
attention_scores = attention_scores + attention_mask
# Normalize the attention scores to probabilities.
attention_probs = nn.functional.softmax(attention_scores, dim=-1)
attention_probs = self.dropout(attention_probs)
if head_mask is not None:
attention_probs = attention_probs * head_mask
c = torch.matmul(attention_probs, v)
c = c.permute(0, 2, 1, 3).contiguous()
new_c_shape = c.size()[:-2] + (self.all_head_size,)
c = c.view(*new_c_shape)
o = self.o(c)
outputs = (o, attention_probs) if output_attentions else (o,)
return outputs
class MPNetAttention(nn.Module):
def __init__(self, config):
super().__init__()
self.attn = MPNetSelfAttention(config)
self.LayerNorm = nn.LayerNorm(config.hidden_size, eps=config.layer_norm_eps)
self.dropout = nn.Dropout(config.hidden_dropout_prob)
self.pruned_heads = set()
def prune_heads(self, heads):
if len(heads) == 0:
return
heads, index = find_pruneable_heads_and_indices(
heads, self.attn.num_attention_heads, self.attn.attention_head_size, self.pruned_heads
)
self.attn.q = prune_linear_layer(self.attn.q, index)
self.attn.k = prune_linear_layer(self.attn.k, index)
self.attn.v = prune_linear_layer(self.attn.v, index)
self.attn.o = prune_linear_layer(self.attn.o, index, dim=1)
self.attn.num_attention_heads = self.attn.num_attention_heads - len(heads)
self.attn.all_head_size = self.attn.attention_head_size * self.attn.num_attention_heads
self.pruned_heads = self.pruned_heads.union(heads)
def forward(
self,
hidden_states,
attention_mask=None,
head_mask=None,
position_bias=None,
output_attentions=False,
**kwargs,
):
self_outputs = self.attn(
hidden_states,
attention_mask,
head_mask,
position_bias,
output_attentions=output_attentions,
)
attention_output = self.LayerNorm(self.dropout(self_outputs[0]) + hidden_states)
outputs = (attention_output,) + self_outputs[1:] # add attentions if we output them
return outputs
# Copied from transformers.models.bert.modeling_bert.BertIntermediate
class MPNetIntermediate(nn.Module):
def __init__(self, config):
super().__init__()
self.dense = nn.Linear(config.hidden_size, config.intermediate_size)
if isinstance(config.hidden_act, str):
self.intermediate_act_fn = ACT2FN[config.hidden_act]
else:
self.intermediate_act_fn = config.hidden_act
def forward(self, hidden_states: torch.Tensor) -> torch.Tensor:
hidden_states = self.dense(hidden_states)
hidden_states = self.intermediate_act_fn(hidden_states)
return hidden_states
# Copied from transformers.models.bert.modeling_bert.BertOutput
class MPNetOutput(nn.Module):
def __init__(self, config):
super().__init__()
self.dense = nn.Linear(config.intermediate_size, config.hidden_size)
self.LayerNorm = nn.LayerNorm(config.hidden_size, eps=config.layer_norm_eps)
self.dropout = nn.Dropout(config.hidden_dropout_prob)
def forward(self, hidden_states: torch.Tensor, input_tensor: torch.Tensor) -> torch.Tensor:
hidden_states = self.dense(hidden_states)
hidden_states = self.dropout(hidden_states)
hidden_states = self.LayerNorm(hidden_states + input_tensor)
return hidden_states
class MPNetLayer(nn.Module):
def __init__(self, config):
super().__init__()
self.attention = MPNetAttention(config)
self.intermediate = MPNetIntermediate(config)
self.output = MPNetOutput(config)
def forward(
self,
hidden_states,
attention_mask=None,
head_mask=None,
position_bias=None,
output_attentions=False,
**kwargs,
):
self_attention_outputs = self.attention(
hidden_states,
attention_mask,
head_mask,
position_bias=position_bias,
output_attentions=output_attentions,
)
attention_output = self_attention_outputs[0]
outputs = self_attention_outputs[1:] # add self attentions if we output attention weights
intermediate_output = self.intermediate(attention_output)
layer_output = self.output(intermediate_output, attention_output)
outputs = (layer_output,) + outputs
return outputs
class MPNetEncoder(nn.Module):
def __init__(self, config):
super().__init__()
self.config = config
self.n_heads = config.num_attention_heads
self.layer = nn.ModuleList([MPNetLayer(config) for _ in range(config.num_hidden_layers)])
self.relative_attention_bias = nn.Embedding(config.relative_attention_num_buckets, self.n_heads)
def forward(
self,
hidden_states: torch.Tensor,
attention_mask: Optional[torch.Tensor] = None,
head_mask: Optional[torch.Tensor] = None,
output_attentions: bool = False,
output_hidden_states: bool = False,
return_dict: bool = False,
**kwargs,
):
position_bias = self.compute_position_bias(hidden_states)
all_hidden_states = () if output_hidden_states else None
all_attentions = () if output_attentions else None
for i, layer_module in enumerate(self.layer):
if output_hidden_states:
all_hidden_states = all_hidden_states + (hidden_states,)
layer_outputs = layer_module(
hidden_states,
attention_mask,
head_mask[i],
position_bias,
output_attentions=output_attentions,
**kwargs,
)
hidden_states = layer_outputs[0]
if output_attentions:
all_attentions = all_attentions + (layer_outputs[1],)
# Add last layer
if output_hidden_states:
all_hidden_states = all_hidden_states + (hidden_states,)
if not return_dict:
return tuple(v for v in [hidden_states, all_hidden_states, all_attentions] if v is not None)
return BaseModelOutput(
last_hidden_state=hidden_states,
hidden_states=all_hidden_states,
attentions=all_attentions,
)
def compute_position_bias(self, x, position_ids=None, num_buckets=32):
bsz, qlen, klen = x.size(0), x.size(1), x.size(1)
if position_ids is not None:
context_position = position_ids[:, :, None]
memory_position = position_ids[:, None, :]
else:
context_position = torch.arange(qlen, dtype=torch.long)[:, None]
memory_position = torch.arange(klen, dtype=torch.long)[None, :]
relative_position = memory_position - context_position
rp_bucket = self.relative_position_bucket(relative_position, num_buckets=num_buckets)
rp_bucket = rp_bucket.to(x.device)
values = self.relative_attention_bias(rp_bucket)
values = values.permute([2, 0, 1]).unsqueeze(0)
values = values.expand((bsz, -1, qlen, klen)).contiguous()
return values
@staticmethod
def relative_position_bucket(relative_position, num_buckets=32, max_distance=128):
ret = 0
n = -relative_position
num_buckets //= 2
ret += (n < 0).to(torch.long) * num_buckets
n = torch.abs(n)
max_exact = num_buckets // 2
is_small = n < max_exact
val_if_large = max_exact + (
torch.log(n.float() / max_exact) / math.log(max_distance / max_exact) * (num_buckets - max_exact)
).to(torch.long)
val_if_large = torch.min(val_if_large, torch.full_like(val_if_large, num_buckets - 1))
ret += torch.where(is_small, n, val_if_large)
return ret
# Copied from transformers.models.bert.modeling_bert.BertPooler
class MPNetPooler(nn.Module):
def __init__(self, config):
super().__init__()
self.dense = nn.Linear(config.hidden_size, config.hidden_size)
self.activation = nn.Tanh()
def forward(self, hidden_states: torch.Tensor) -> torch.Tensor:
# We "pool" the model by simply taking the hidden state corresponding
# to the first token.
first_token_tensor = hidden_states[:, 0]
pooled_output = self.dense(first_token_tensor)
pooled_output = self.activation(pooled_output)
return pooled_output
MPNET_START_DOCSTRING = r"""
This model inherits from [`PreTrainedModel`]. Check the superclass documentation for the generic methods the
library implements for all its model (such as downloading or saving, resizing the input embeddings, pruning heads
etc.)
This model is also a PyTorch [torch.nn.Module](https://pytorch.org/docs/stable/nn.html#torch.nn.Module) subclass.
Use it as a regular PyTorch Module and refer to the PyTorch documentation for all matter related to general usage
and behavior.
Parameters:
config ([`MPNetConfig`]): Model configuration class with all the parameters of the model.
Initializing with a config file does not load the weights associated with the model, only the
configuration. Check out the [`~PreTrainedModel.from_pretrained`] method to load the model weights.
"""
MPNET_INPUTS_DOCSTRING = r"""
Args:
input_ids (`torch.LongTensor` of shape `({0})`):
Indices of input sequence tokens in the vocabulary.
Indices can be obtained using [`AutoTokenizer`]. See [`PreTrainedTokenizer.encode`] and
[`PreTrainedTokenizer.__call__`] for details.
[What are input IDs?](../glossary#input-ids)
attention_mask (`torch.FloatTensor` of shape `(batch_size, sequence_length)`, *optional*):
Mask to avoid performing attention on padding token indices. Mask values selected in `[0, 1]`:
- 1 for tokens that are **not masked**,
- 0 for tokens that are **masked**.
[What are attention masks?](../glossary#attention-mask)
position_ids (`torch.LongTensor` of shape `({0})`, *optional*):
Indices of positions of each input sequence tokens in the position embeddings. Selected in the range `[0,
config.max_position_embeddings - 1]`.
[What are position IDs?](../glossary#position-ids)
head_mask (`torch.FloatTensor` of shape `(num_heads,)` or `(num_layers, num_heads)`, *optional*):
Mask to nullify selected heads of the self-attention modules. Mask values selected in `[0, 1]`:
- 1 indicates the head is **not masked**,
- 0 indicates the head is **masked**.
inputs_embeds (`torch.FloatTensor` of shape `({0}, hidden_size)`, *optional*):
Optionally, instead of passing `input_ids` you can choose to directly pass an embedded representation. This
is useful if you want more control over how to convert *input_ids* indices into associated vectors than the
model's internal embedding lookup matrix.
output_attentions (`bool`, *optional*):
Whether or not to return the attentions tensors of all attention layers. See `attentions` under returned
tensors for more detail.
output_hidden_states (`bool`, *optional*):
Whether or not to return the hidden states of all layers. See `hidden_states` under returned tensors for
more detail.
return_dict (`bool`, *optional*):
Whether or not to return a [`~utils.ModelOutput`] instead of a plain tuple.
"""
@add_start_docstrings(
"The bare MPNet Model transformer outputting raw hidden-states without any specific head on top.",
MPNET_START_DOCSTRING,
)
class MPNetModel(MPNetPreTrainedModel):
def __init__(self, config, add_pooling_layer=True):
super().__init__(config)
self.config = config
self.embeddings = MPNetEmbeddings(config)
self.encoder = MPNetEncoder(config)
self.pooler = MPNetPooler(config) if add_pooling_layer else None
# Initialize weights and apply final processing
self.post_init()
def get_input_embeddings(self):
return self.embeddings.word_embeddings
def set_input_embeddings(self, value):
self.embeddings.word_embeddings = value
def _prune_heads(self, heads_to_prune):
"""
Prunes heads of the model. heads_to_prune: dict of {layer_num: list of heads to prune in this layer} See base
class PreTrainedModel
"""
for layer, heads in heads_to_prune.items():
self.encoder.layer[layer].attention.prune_heads(heads)
@add_start_docstrings_to_model_forward(MPNET_INPUTS_DOCSTRING.format("batch_size, sequence_length"))
@add_code_sample_docstrings(
checkpoint=_CHECKPOINT_FOR_DOC,
output_type=BaseModelOutputWithPooling,
config_class=_CONFIG_FOR_DOC,
)
def forward(
self,
input_ids: Optional[torch.LongTensor] = None,
attention_mask: Optional[torch.FloatTensor] = None,
position_ids: Optional[torch.LongTensor] = None,
head_mask: Optional[torch.FloatTensor] = None,
inputs_embeds: Optional[torch.FloatTensor] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
**kwargs,
) -> Union[Tuple[torch.Tensor], BaseModelOutputWithPooling]:
output_attentions = output_attentions if output_attentions is not None else self.config.output_attentions
output_hidden_states = (
output_hidden_states if output_hidden_states is not None else self.config.output_hidden_states
)
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
if input_ids is not None and inputs_embeds is not None:
raise ValueError("You cannot specify both input_ids and inputs_embeds at the same time")
elif input_ids is not None:
input_shape = input_ids.size()
elif inputs_embeds is not None:
input_shape = inputs_embeds.size()[:-1]
else:
raise ValueError("You have to specify either input_ids or inputs_embeds")
device = input_ids.device if input_ids is not None else inputs_embeds.device
if attention_mask is None:
attention_mask = torch.ones(input_shape, device=device)
extended_attention_mask: torch.Tensor = self.get_extended_attention_mask(attention_mask, input_shape)
head_mask = self.get_head_mask(head_mask, self.config.num_hidden_layers)
embedding_output = self.embeddings(input_ids=input_ids, position_ids=position_ids, inputs_embeds=inputs_embeds)
encoder_outputs = self.encoder(
embedding_output,
attention_mask=extended_attention_mask,
head_mask=head_mask,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
sequence_output = encoder_outputs[0]
pooled_output = self.pooler(sequence_output) if self.pooler is not None else None
if not return_dict:
return (sequence_output, pooled_output) + encoder_outputs[1:]
return BaseModelOutputWithPooling(
last_hidden_state=sequence_output,
pooler_output=pooled_output,
hidden_states=encoder_outputs.hidden_states,
attentions=encoder_outputs.attentions,
)
class MPNetForMaskedLM(MPNetPreTrainedModel):
_tied_weights_keys = ["lm_head.decoder"]
def __init__(self, config):
super().__init__(config)
self.mpnet = MPNetModel(config, add_pooling_layer=False)
self.lm_head = MPNetLMHead(config)
# Initialize weights and apply final processing
self.post_init()
def get_output_embeddings(self):
return self.lm_head.decoder
def set_output_embeddings(self, new_embeddings):
self.lm_head.decoder = new_embeddings
@add_start_docstrings_to_model_forward(MPNET_INPUTS_DOCSTRING.format("batch_size, sequence_length"))
@add_code_sample_docstrings(
checkpoint=_CHECKPOINT_FOR_DOC,
output_type=MaskedLMOutput,
config_class=_CONFIG_FOR_DOC,
)
def forward(
self,
input_ids: Optional[torch.LongTensor] = None,
attention_mask: Optional[torch.FloatTensor] = None,
position_ids: Optional[torch.LongTensor] = None,
head_mask: Optional[torch.FloatTensor] = None,
inputs_embeds: Optional[torch.FloatTensor] = None,
labels: Optional[torch.LongTensor] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[Tuple[torch.Tensor], MaskedLMOutput]:
r"""
labels (`torch.LongTensor` of shape `(batch_size, sequence_length)`, *optional*):
Labels for computing the masked language modeling loss. Indices should be in `[-100, 0, ...,
config.vocab_size]` (see `input_ids` docstring) Tokens with indices set to `-100` are ignored (masked), the
loss is only computed for the tokens with labels in `[0, ..., config.vocab_size]`
"""
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
outputs = self.mpnet(
input_ids,
attention_mask=attention_mask,
position_ids=position_ids,
head_mask=head_mask,
inputs_embeds=inputs_embeds,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
sequence_output = outputs[0]
prediction_scores = self.lm_head(sequence_output)
masked_lm_loss = None
if labels is not None:
loss_fct = CrossEntropyLoss()
masked_lm_loss = loss_fct(prediction_scores.view(-1, self.config.vocab_size), labels.view(-1))
if not return_dict:
output = (prediction_scores,) + outputs[2:]
return ((masked_lm_loss,) + output) if masked_lm_loss is not None else output
return MaskedLMOutput(
loss=masked_lm_loss,
logits=prediction_scores,
hidden_states=outputs.hidden_states,
attentions=outputs.attentions,
)
class MPNetLMHead(nn.Module):
"""MPNet Head for masked and permuted language modeling."""
def __init__(self, config):
super().__init__()
self.dense = nn.Linear(config.hidden_size, config.hidden_size)
self.layer_norm = nn.LayerNorm(config.hidden_size, eps=config.layer_norm_eps)
self.decoder = nn.Linear(config.hidden_size, config.vocab_size, bias=False)
self.bias = nn.Parameter(torch.zeros(config.vocab_size))
# Need a link between the two variables so that the bias is correctly resized with `resize_token_embeddings`
self.decoder.bias = self.bias
def forward(self, features, **kwargs):
x = self.dense(features)
x = gelu(x)
x = self.layer_norm(x)
# project back to size of vocabulary with bias
x = self.decoder(x)
return x
@add_start_docstrings(
"""
MPNet Model transformer with a sequence classification/regression head on top (a linear layer on top of the pooled
output) e.g. for GLUE tasks.
""",
MPNET_START_DOCSTRING,
)
class MPNetForSequenceClassification(MPNetPreTrainedModel):
def __init__(self, config):
super().__init__(config)
self.num_labels = config.num_labels
self.mpnet = MPNetModel(config, add_pooling_layer=False)
self.classifier = MPNetClassificationHead(config)
# Initialize weights and apply final processing
self.post_init()
@add_start_docstrings_to_model_forward(MPNET_INPUTS_DOCSTRING.format("batch_size, sequence_length"))
@add_code_sample_docstrings(
checkpoint=_CHECKPOINT_FOR_DOC,
output_type=SequenceClassifierOutput,
config_class=_CONFIG_FOR_DOC,
)
def forward(
self,
input_ids: Optional[torch.LongTensor] = None,
attention_mask: Optional[torch.FloatTensor] = None,
position_ids: Optional[torch.LongTensor] = None,
head_mask: Optional[torch.FloatTensor] = None,
inputs_embeds: Optional[torch.FloatTensor] = None,
labels: Optional[torch.LongTensor] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[Tuple[torch.Tensor], SequenceClassifierOutput]:
r"""
labels (`torch.LongTensor` of shape `(batch_size,)`, *optional*):
Labels for computing the sequence classification/regression loss. Indices should be in `[0, ...,
config.num_labels - 1]`. If `config.num_labels == 1` a regression loss is computed (Mean-Square loss), If
`config.num_labels > 1` a classification loss is computed (Cross-Entropy).
"""
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
outputs = self.mpnet(
input_ids,
attention_mask=attention_mask,
position_ids=position_ids,
head_mask=head_mask,
inputs_embeds=inputs_embeds,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
sequence_output = outputs[0]
logits = self.classifier(sequence_output)
loss = None
if labels is not None:
if self.config.problem_type is None:
if self.num_labels == 1:
self.config.problem_type = "regression"
elif self.num_labels > 1 and (labels.dtype == torch.long or labels.dtype == torch.int):
self.config.problem_type = "single_label_classification"
else:
self.config.problem_type = "multi_label_classification"
if self.config.problem_type == "regression":
loss_fct = MSELoss()
if self.num_labels == 1:
loss = loss_fct(logits.squeeze(), labels.squeeze())
else:
loss = loss_fct(logits, labels)
elif self.config.problem_type == "single_label_classification":
loss_fct = CrossEntropyLoss()
loss = loss_fct(logits.view(-1, self.num_labels), labels.view(-1))
elif self.config.problem_type == "multi_label_classification":
loss_fct = BCEWithLogitsLoss()
loss = loss_fct(logits, labels)
if not return_dict:
output = (logits,) + outputs[2:]
return ((loss,) + output) if loss is not None else output
return SequenceClassifierOutput(
loss=loss,
logits=logits,
hidden_states=outputs.hidden_states,
attentions=outputs.attentions,
)
@add_start_docstrings(
"""
MPNet Model with a multiple choice classification head on top (a linear layer on top of the pooled output and a
softmax) e.g. for RocStories/SWAG tasks.
""",
MPNET_START_DOCSTRING,
)
class MPNetForMultipleChoice(MPNetPreTrainedModel):
def __init__(self, config):
super().__init__(config)
self.mpnet = MPNetModel(config)
self.dropout = nn.Dropout(config.hidden_dropout_prob)
self.classifier = nn.Linear(config.hidden_size, 1)
# Initialize weights and apply final processing
self.post_init()
@add_start_docstrings_to_model_forward(MPNET_INPUTS_DOCSTRING.format("batch_size, num_choices, sequence_length"))
@add_code_sample_docstrings(
checkpoint=_CHECKPOINT_FOR_DOC,
output_type=MultipleChoiceModelOutput,
config_class=_CONFIG_FOR_DOC,
)
def forward(
self,
input_ids: Optional[torch.LongTensor] = None,
attention_mask: Optional[torch.FloatTensor] = None,
position_ids: Optional[torch.LongTensor] = None,
head_mask: Optional[torch.FloatTensor] = None,
inputs_embeds: Optional[torch.FloatTensor] = None,
labels: Optional[torch.LongTensor] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[Tuple[torch.Tensor], MultipleChoiceModelOutput]:
r"""
labels (`torch.LongTensor` of shape `(batch_size,)`, *optional*):
Labels for computing the multiple choice classification loss. Indices should be in `[0, ...,
num_choices-1]` where `num_choices` is the size of the second dimension of the input tensors. (See
`input_ids` above)
"""
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
num_choices = input_ids.shape[1] if input_ids is not None else inputs_embeds.shape[1]
flat_input_ids = input_ids.view(-1, input_ids.size(-1)) if input_ids is not None else None
flat_position_ids = position_ids.view(-1, position_ids.size(-1)) if position_ids is not None else None
flat_attention_mask = attention_mask.view(-1, attention_mask.size(-1)) if attention_mask is not None else None
flat_inputs_embeds = (
inputs_embeds.view(-1, inputs_embeds.size(-2), inputs_embeds.size(-1))
if inputs_embeds is not None
else None
)
outputs = self.mpnet(
flat_input_ids,
position_ids=flat_position_ids,
attention_mask=flat_attention_mask,
head_mask=head_mask,
inputs_embeds=flat_inputs_embeds,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
pooled_output = outputs[1]
pooled_output = self.dropout(pooled_output)
logits = self.classifier(pooled_output)
reshaped_logits = logits.view(-1, num_choices)
loss = None
if labels is not None:
loss_fct = CrossEntropyLoss()
loss = loss_fct(reshaped_logits, labels)
if not return_dict:
output = (reshaped_logits,) + outputs[2:]
return ((loss,) + output) if loss is not None else output
return MultipleChoiceModelOutput(
loss=loss,
logits=reshaped_logits,
hidden_states=outputs.hidden_states,
attentions=outputs.attentions,
)
@add_start_docstrings(
"""
MPNet Model with a token classification head on top (a linear layer on top of the hidden-states output) e.g. for
Named-Entity-Recognition (NER) tasks.
""",
MPNET_START_DOCSTRING,
)
class MPNetForTokenClassification(MPNetPreTrainedModel):
def __init__(self, config):
super().__init__(config)
self.num_labels = config.num_labels
self.mpnet = MPNetModel(config, add_pooling_layer=False)
self.dropout = nn.Dropout(config.hidden_dropout_prob)
self.classifier = nn.Linear(config.hidden_size, config.num_labels)
# Initialize weights and apply final processing
self.post_init()
@add_start_docstrings_to_model_forward(MPNET_INPUTS_DOCSTRING.format("batch_size, sequence_length"))
@add_code_sample_docstrings(
checkpoint=_CHECKPOINT_FOR_DOC,
output_type=TokenClassifierOutput,
config_class=_CONFIG_FOR_DOC,
)
def forward(
self,
input_ids: Optional[torch.LongTensor] = None,
attention_mask: Optional[torch.FloatTensor] = None,
position_ids: Optional[torch.LongTensor] = None,
head_mask: Optional[torch.FloatTensor] = None,
inputs_embeds: Optional[torch.FloatTensor] = None,
labels: Optional[torch.LongTensor] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[Tuple[torch.Tensor], TokenClassifierOutput]:
r"""
labels (`torch.LongTensor` of shape `(batch_size, sequence_length)`, *optional*):
Labels for computing the token classification loss. Indices should be in `[0, ..., config.num_labels - 1]`.
"""
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
outputs = self.mpnet(
input_ids,
attention_mask=attention_mask,
position_ids=position_ids,
head_mask=head_mask,
inputs_embeds=inputs_embeds,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
sequence_output = outputs[0]
sequence_output = self.dropout(sequence_output)
logits = self.classifier(sequence_output)
loss = None
if labels is not None:
loss_fct = CrossEntropyLoss()
loss = loss_fct(logits.view(-1, self.num_labels), labels.view(-1))
if not return_dict:
output = (logits,) + outputs[2:]
return ((loss,) + output) if loss is not None else output
return TokenClassifierOutput(
loss=loss,
logits=logits,
hidden_states=outputs.hidden_states,
attentions=outputs.attentions,
)
class MPNetClassificationHead(nn.Module):
"""Head for sentence-level classification tasks."""
def __init__(self, config):
super().__init__()
self.dense = nn.Linear(config.hidden_size, config.hidden_size)
self.dropout = nn.Dropout(config.hidden_dropout_prob)
self.out_proj = nn.Linear(config.hidden_size, config.num_labels)
def forward(self, features, **kwargs):
x = features[:, 0, :] # take <s> token (equiv. to BERT's [CLS] token)
x = self.dropout(x)
x = self.dense(x)
x = torch.tanh(x)
x = self.dropout(x)
x = self.out_proj(x)
return x
@add_start_docstrings(
"""
MPNet Model with a span classification head on top for extractive question-answering tasks like SQuAD (a linear
layers on top of the hidden-states output to compute `span start logits` and `span end logits`).
""",
MPNET_START_DOCSTRING,
)
class MPNetForQuestionAnswering(MPNetPreTrainedModel):
def __init__(self, config):
super().__init__(config)
self.num_labels = config.num_labels
self.mpnet = MPNetModel(config, add_pooling_layer=False)
self.qa_outputs = nn.Linear(config.hidden_size, config.num_labels)
# Initialize weights and apply final processing
self.post_init()
@add_start_docstrings_to_model_forward(MPNET_INPUTS_DOCSTRING.format("batch_size, sequence_length"))
@add_code_sample_docstrings(
checkpoint=_CHECKPOINT_FOR_DOC,
output_type=QuestionAnsweringModelOutput,
config_class=_CONFIG_FOR_DOC,
)
def forward(
self,
input_ids: Optional[torch.LongTensor] = None,
attention_mask: Optional[torch.FloatTensor] = None,
position_ids: Optional[torch.LongTensor] = None,
head_mask: Optional[torch.FloatTensor] = None,
inputs_embeds: Optional[torch.FloatTensor] = None,
start_positions: Optional[torch.LongTensor] = None,
end_positions: Optional[torch.LongTensor] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[Tuple[torch.Tensor], QuestionAnsweringModelOutput]:
r"""
start_positions (`torch.LongTensor` of shape `(batch_size,)`, *optional*):
Labels for position (index) of the start of the labelled span for computing the token classification loss.
Positions are clamped to the length of the sequence (`sequence_length`). Position outside of the sequence
are not taken into account for computing the loss.
end_positions (`torch.LongTensor` of shape `(batch_size,)`, *optional*):
Labels for position (index) of the end of the labelled span for computing the token classification loss.
Positions are clamped to the length of the sequence (`sequence_length`). Position outside of the sequence
are not taken into account for computing the loss.
"""
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
outputs = self.mpnet(
input_ids,
attention_mask=attention_mask,
position_ids=position_ids,
head_mask=head_mask,
inputs_embeds=inputs_embeds,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
sequence_output = outputs[0]
logits = self.qa_outputs(sequence_output)
start_logits, end_logits = logits.split(1, dim=-1)
start_logits = start_logits.squeeze(-1).contiguous()
end_logits = end_logits.squeeze(-1).contiguous()
total_loss = None
if start_positions is not None and end_positions is not None:
# If we are on multi-GPU, split add a dimension
if len(start_positions.size()) > 1:
start_positions = start_positions.squeeze(-1)
if len(end_positions.size()) > 1:
end_positions = end_positions.squeeze(-1)
# sometimes the start/end positions are outside our model inputs, we ignore these terms
ignored_index = start_logits.size(1)
start_positions = start_positions.clamp(0, ignored_index)
end_positions = end_positions.clamp(0, ignored_index)
loss_fct = CrossEntropyLoss(ignore_index=ignored_index)
start_loss = loss_fct(start_logits, start_positions)
end_loss = loss_fct(end_logits, end_positions)
total_loss = (start_loss + end_loss) / 2
if not return_dict:
output = (start_logits, end_logits) + outputs[2:]
return ((total_loss,) + output) if total_loss is not None else output
return QuestionAnsweringModelOutput(
loss=total_loss,
start_logits=start_logits,
end_logits=end_logits,
hidden_states=outputs.hidden_states,
attentions=outputs.attentions,
)
def create_position_ids_from_input_ids(input_ids, padding_idx):
"""
Replace non-padding symbols with their position numbers. Position numbers begin at padding_idx+1. Padding symbols
are ignored. This is modified from fairseq's `utils.make_positions`. :param torch.Tensor x: :return torch.Tensor:
"""
# The series of casts and type-conversions here are carefully balanced to both work with ONNX export and XLA.
mask = input_ids.ne(padding_idx).int()
incremental_indices = torch.cumsum(mask, dim=1).type_as(mask) * mask
return incremental_indices.long() + padding_idx
| 42,548 | 39.330806 | 119 | py |
transformers | transformers-main/src/transformers/models/mpnet/__init__.py | # Copyright 2020 The HuggingFace Team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
from typing import TYPE_CHECKING
from ...utils import (
OptionalDependencyNotAvailable,
_LazyModule,
is_flax_available,
is_tf_available,
is_tokenizers_available,
is_torch_available,
)
_import_structure = {
"configuration_mpnet": ["MPNET_PRETRAINED_CONFIG_ARCHIVE_MAP", "MPNetConfig"],
"tokenization_mpnet": ["MPNetTokenizer"],
}
try:
if not is_tokenizers_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
_import_structure["tokenization_mpnet_fast"] = ["MPNetTokenizerFast"]
try:
if not is_torch_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
_import_structure["modeling_mpnet"] = [
"MPNET_PRETRAINED_MODEL_ARCHIVE_LIST",
"MPNetForMaskedLM",
"MPNetForMultipleChoice",
"MPNetForQuestionAnswering",
"MPNetForSequenceClassification",
"MPNetForTokenClassification",
"MPNetLayer",
"MPNetModel",
"MPNetPreTrainedModel",
]
try:
if not is_tf_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
_import_structure["modeling_tf_mpnet"] = [
"TF_MPNET_PRETRAINED_MODEL_ARCHIVE_LIST",
"TFMPNetEmbeddings",
"TFMPNetForMaskedLM",
"TFMPNetForMultipleChoice",
"TFMPNetForQuestionAnswering",
"TFMPNetForSequenceClassification",
"TFMPNetForTokenClassification",
"TFMPNetMainLayer",
"TFMPNetModel",
"TFMPNetPreTrainedModel",
]
if TYPE_CHECKING:
from .configuration_mpnet import MPNET_PRETRAINED_CONFIG_ARCHIVE_MAP, MPNetConfig
from .tokenization_mpnet import MPNetTokenizer
try:
if not is_tokenizers_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
from .tokenization_mpnet_fast import MPNetTokenizerFast
try:
if not is_torch_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
from .modeling_mpnet import (
MPNET_PRETRAINED_MODEL_ARCHIVE_LIST,
MPNetForMaskedLM,
MPNetForMultipleChoice,
MPNetForQuestionAnswering,
MPNetForSequenceClassification,
MPNetForTokenClassification,
MPNetLayer,
MPNetModel,
MPNetPreTrainedModel,
)
try:
if not is_tf_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
from .modeling_tf_mpnet import (
TF_MPNET_PRETRAINED_MODEL_ARCHIVE_LIST,
TFMPNetEmbeddings,
TFMPNetForMaskedLM,
TFMPNetForMultipleChoice,
TFMPNetForQuestionAnswering,
TFMPNetForSequenceClassification,
TFMPNetForTokenClassification,
TFMPNetMainLayer,
TFMPNetModel,
TFMPNetPreTrainedModel,
)
else:
import sys
sys.modules[__name__] = _LazyModule(__name__, globals()["__file__"], _import_structure, module_spec=__spec__)
| 3,875 | 28.587786 | 113 | py |
transformers | transformers-main/src/transformers/models/mpnet/modeling_tf_mpnet.py | # coding=utf-8
# Copyright 2018 The HuggingFace Inc. team, Microsoft Corporation.
# Copyright (c) 2018, NVIDIA CORPORATION. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
""" TF 2.0 MPNet model."""
from __future__ import annotations
import math
import warnings
from typing import Optional, Tuple, Union
import numpy as np
import tensorflow as tf
from ...activations_tf import get_tf_activation
from ...modeling_tf_outputs import (
TFBaseModelOutput,
TFBaseModelOutputWithPooling,
TFMaskedLMOutput,
TFMultipleChoiceModelOutput,
TFQuestionAnsweringModelOutput,
TFSequenceClassifierOutput,
TFTokenClassifierOutput,
)
from ...modeling_tf_utils import (
TFMaskedLanguageModelingLoss,
TFModelInputType,
TFMultipleChoiceLoss,
TFPreTrainedModel,
TFQuestionAnsweringLoss,
TFSequenceClassificationLoss,
TFTokenClassificationLoss,
get_initializer,
keras_serializable,
unpack_inputs,
)
from ...tf_utils import check_embeddings_within_bounds, shape_list, stable_softmax
from ...utils import (
add_code_sample_docstrings,
add_start_docstrings,
add_start_docstrings_to_model_forward,
logging,
)
from .configuration_mpnet import MPNetConfig
logger = logging.get_logger(__name__)
_CHECKPOINT_FOR_DOC = "microsoft/mpnet-base"
_CONFIG_FOR_DOC = "MPNetConfig"
TF_MPNET_PRETRAINED_MODEL_ARCHIVE_LIST = [
"microsoft/mpnet-base",
]
class TFMPNetPreTrainedModel(TFPreTrainedModel):
"""
An abstract class to handle weights initialization and a simple interface for downloading and loading pretrained
models.
"""
config_class = MPNetConfig
base_model_prefix = "mpnet"
class TFMPNetEmbeddings(tf.keras.layers.Layer):
"""Construct the embeddings from word, position embeddings."""
def __init__(self, config, **kwargs):
super().__init__(**kwargs)
self.padding_idx = 1
self.config = config
self.hidden_size = config.hidden_size
self.max_position_embeddings = config.max_position_embeddings
self.initializer_range = config.initializer_range
self.LayerNorm = tf.keras.layers.LayerNormalization(epsilon=config.layer_norm_eps, name="LayerNorm")
self.dropout = tf.keras.layers.Dropout(rate=config.hidden_dropout_prob)
def build(self, input_shape: tf.TensorShape):
with tf.name_scope("word_embeddings"):
self.weight = self.add_weight(
name="weight",
shape=[self.config.vocab_size, self.hidden_size],
initializer=get_initializer(initializer_range=self.initializer_range),
)
with tf.name_scope("position_embeddings"):
self.position_embeddings = self.add_weight(
name="embeddings",
shape=[self.max_position_embeddings, self.hidden_size],
initializer=get_initializer(initializer_range=self.initializer_range),
)
super().build(input_shape)
def create_position_ids_from_input_ids(self, input_ids):
"""
Replace non-padding symbols with their position numbers. Position numbers begin at padding_idx+1. Padding
symbols are ignored. This is modified from fairseq's `utils.make_positions`.
Args:
input_ids: tf.Tensor
Returns: tf.Tensor
"""
mask = tf.cast(tf.math.not_equal(input_ids, self.padding_idx), dtype=input_ids.dtype)
incremental_indices = tf.math.cumsum(mask, axis=1) * mask
return incremental_indices + self.padding_idx
def call(self, input_ids=None, position_ids=None, inputs_embeds=None, training=False):
"""
Applies embedding based on inputs tensor.
Returns:
final_embeddings (`tf.Tensor`): output embedding tensor.
"""
assert not (input_ids is None and inputs_embeds is None)
if input_ids is not None:
check_embeddings_within_bounds(input_ids, self.config.vocab_size)
inputs_embeds = tf.gather(params=self.weight, indices=input_ids)
input_shape = shape_list(inputs_embeds)[:-1]
if position_ids is None:
if input_ids is not None:
# Create the position ids from the input token ids. Any padded tokens remain padded.
position_ids = self.create_position_ids_from_input_ids(input_ids=input_ids)
else:
position_ids = tf.expand_dims(
tf.range(start=self.padding_idx + 1, limit=input_shape[-1] + self.padding_idx + 1), axis=0
)
position_embeds = tf.gather(params=self.position_embeddings, indices=position_ids)
final_embeddings = inputs_embeds + position_embeds
final_embeddings = self.LayerNorm(inputs=final_embeddings)
final_embeddings = self.dropout(inputs=final_embeddings, training=training)
return final_embeddings
# Copied from transformers.models.bert.modeling_tf_bert.TFBertPooler with Bert->MPNet
class TFMPNetPooler(tf.keras.layers.Layer):
def __init__(self, config: MPNetConfig, **kwargs):
super().__init__(**kwargs)
self.dense = tf.keras.layers.Dense(
units=config.hidden_size,
kernel_initializer=get_initializer(config.initializer_range),
activation="tanh",
name="dense",
)
def call(self, hidden_states: tf.Tensor) -> tf.Tensor:
# We "pool" the model by simply taking the hidden state corresponding
# to the first token.
first_token_tensor = hidden_states[:, 0]
pooled_output = self.dense(inputs=first_token_tensor)
return pooled_output
class TFMPNetSelfAttention(tf.keras.layers.Layer):
def __init__(self, config, **kwargs):
super().__init__(**kwargs)
if config.hidden_size % config.num_attention_heads != 0:
raise ValueError(
f"The hidden size ({config.hidden_size}) is not a multiple of the number of attention "
f"heads ({config.num_attention_heads}"
)
self.num_attention_heads = config.num_attention_heads
assert config.hidden_size % config.num_attention_heads == 0
self.attention_head_size = int(config.hidden_size / config.num_attention_heads)
self.all_head_size = self.num_attention_heads * self.attention_head_size
self.q = tf.keras.layers.Dense(
self.all_head_size, kernel_initializer=get_initializer(config.initializer_range), name="q"
)
self.k = tf.keras.layers.Dense(
self.all_head_size, kernel_initializer=get_initializer(config.initializer_range), name="k"
)
self.v = tf.keras.layers.Dense(
self.all_head_size, kernel_initializer=get_initializer(config.initializer_range), name="v"
)
self.o = tf.keras.layers.Dense(
config.hidden_size, kernel_initializer=get_initializer(config.initializer_range), name="o"
)
self.dropout = tf.keras.layers.Dropout(config.attention_probs_dropout_prob)
def transpose_for_scores(self, x, batch_size):
# Reshape from [batch_size, seq_length, all_head_size] to [batch_size, seq_length, num_attention_heads, attention_head_size]
x = tf.reshape(x, (batch_size, -1, self.num_attention_heads, self.attention_head_size))
return tf.transpose(x, perm=[0, 2, 1, 3])
def call(self, hidden_states, attention_mask, head_mask, output_attentions, position_bias=None, training=False):
batch_size = shape_list(hidden_states)[0]
q = self.q(hidden_states)
k = self.k(hidden_states)
v = self.v(hidden_states)
q = self.transpose_for_scores(q, batch_size)
k = self.transpose_for_scores(k, batch_size)
v = self.transpose_for_scores(v, batch_size)
attention_scores = tf.matmul(q, k, transpose_b=True)
dk = tf.cast(shape_list(k)[-1], attention_scores.dtype)
attention_scores = attention_scores / tf.math.sqrt(dk)
# Apply relative position embedding (precomputed in MPNetEncoder) if provided.
if position_bias is not None:
attention_scores += position_bias
if attention_mask is not None:
attention_scores = attention_scores + attention_mask
attention_probs = stable_softmax(attention_scores, axis=-1)
attention_probs = self.dropout(attention_probs, training=training)
if head_mask is not None:
attention_probs = attention_probs * head_mask
c = tf.matmul(attention_probs, v)
c = tf.transpose(c, perm=[0, 2, 1, 3])
c = tf.reshape(c, (batch_size, -1, self.all_head_size))
o = self.o(c)
outputs = (o, attention_probs) if output_attentions else (o,)
return outputs
class TFMPNetAttention(tf.keras.layers.Layer):
def __init__(self, config, **kwargs):
super().__init__(**kwargs)
self.attn = TFMPNetSelfAttention(config, name="attn")
self.LayerNorm = tf.keras.layers.LayerNormalization(epsilon=config.layer_norm_eps, name="LayerNorm")
self.dropout = tf.keras.layers.Dropout(config.hidden_dropout_prob)
def prune_heads(self, heads):
raise NotImplementedError
def call(self, input_tensor, attention_mask, head_mask, output_attentions, position_bias=None, training=False):
self_outputs = self.attn(
input_tensor, attention_mask, head_mask, output_attentions, position_bias=position_bias, training=training
)
attention_output = self.LayerNorm(self.dropout(self_outputs[0]) + input_tensor)
outputs = (attention_output,) + self_outputs[1:] # add attentions if we output them
return outputs
# Copied from transformers.models.bert.modeling_tf_bert.TFBertIntermediate with Bert->MPNet
class TFMPNetIntermediate(tf.keras.layers.Layer):
def __init__(self, config: MPNetConfig, **kwargs):
super().__init__(**kwargs)
self.dense = tf.keras.layers.Dense(
units=config.intermediate_size, kernel_initializer=get_initializer(config.initializer_range), name="dense"
)
if isinstance(config.hidden_act, str):
self.intermediate_act_fn = get_tf_activation(config.hidden_act)
else:
self.intermediate_act_fn = config.hidden_act
def call(self, hidden_states: tf.Tensor) -> tf.Tensor:
hidden_states = self.dense(inputs=hidden_states)
hidden_states = self.intermediate_act_fn(hidden_states)
return hidden_states
# Copied from transformers.models.bert.modeling_tf_bert.TFBertOutput with Bert->MPNet
class TFMPNetOutput(tf.keras.layers.Layer):
def __init__(self, config: MPNetConfig, **kwargs):
super().__init__(**kwargs)
self.dense = tf.keras.layers.Dense(
units=config.hidden_size, kernel_initializer=get_initializer(config.initializer_range), name="dense"
)
self.LayerNorm = tf.keras.layers.LayerNormalization(epsilon=config.layer_norm_eps, name="LayerNorm")
self.dropout = tf.keras.layers.Dropout(rate=config.hidden_dropout_prob)
def call(self, hidden_states: tf.Tensor, input_tensor: tf.Tensor, training: bool = False) -> tf.Tensor:
hidden_states = self.dense(inputs=hidden_states)
hidden_states = self.dropout(inputs=hidden_states, training=training)
hidden_states = self.LayerNorm(inputs=hidden_states + input_tensor)
return hidden_states
class TFMPNetLayer(tf.keras.layers.Layer):
def __init__(self, config, **kwargs):
super().__init__(**kwargs)
self.attention = TFMPNetAttention(config, name="attention")
self.intermediate = TFMPNetIntermediate(config, name="intermediate")
self.out = TFMPNetOutput(config, name="output")
def call(self, hidden_states, attention_mask, head_mask, output_attentions, position_bias=None, training=False):
self_attention_outputs = self.attention(
hidden_states, attention_mask, head_mask, output_attentions, position_bias=position_bias, training=training
)
attention_output = self_attention_outputs[0]
outputs = self_attention_outputs[1:] # add self attentions if we output attention weights
intermediate_output = self.intermediate(attention_output)
layer_output = self.out(intermediate_output, attention_output, training=training)
outputs = (layer_output,) + outputs # add attentions if we output them
return outputs
class TFMPNetEncoder(tf.keras.layers.Layer):
def __init__(self, config, **kwargs):
super().__init__(**kwargs)
self.config = config
self.n_heads = config.num_attention_heads
self.output_attentions = config.output_attentions
self.output_hidden_states = config.output_hidden_states
self.relative_attention_num_buckets = config.relative_attention_num_buckets
self.initializer_range = config.initializer_range
self.layer = [TFMPNetLayer(config, name=f"layer_._{i}") for i in range(config.num_hidden_layers)]
self.relative_attention_num_buckets = config.relative_attention_num_buckets
def build(self, input_shape):
with tf.name_scope("relative_attention_bias"):
self.relative_attention_bias = self.add_weight(
name="embeddings",
shape=[self.relative_attention_num_buckets, self.n_heads],
initializer=get_initializer(self.initializer_range),
)
return super().build(input_shape)
def call(
self,
hidden_states,
attention_mask,
head_mask,
output_attentions,
output_hidden_states,
return_dict,
training=False,
):
position_bias = self.compute_position_bias(hidden_states)
all_hidden_states = () if output_hidden_states else None
all_attentions = () if output_attentions else None
for i, layer_module in enumerate(self.layer):
if output_hidden_states:
all_hidden_states = all_hidden_states + (hidden_states,)
layer_outputs = layer_module(
hidden_states,
attention_mask,
head_mask[i],
output_attentions,
position_bias=position_bias,
training=training,
)
hidden_states = layer_outputs[0]
if output_attentions:
all_attentions = all_attentions + (layer_outputs[1],)
# Add last layer
if output_hidden_states:
all_hidden_states = all_hidden_states + (hidden_states,)
if not return_dict:
return tuple(v for v in [hidden_states, all_hidden_states, all_attentions] if v is not None)
return TFBaseModelOutput(
last_hidden_state=hidden_states, hidden_states=all_hidden_states, attentions=all_attentions
)
@staticmethod
def _relative_position_bucket(relative_position, num_buckets=32, max_distance=128):
ret = 0
n = -relative_position
num_buckets //= 2
ret += tf.cast(tf.math.less(n, 0), dtype=relative_position.dtype) * num_buckets
n = tf.math.abs(n)
# now n is in the range [0, inf)
max_exact = num_buckets // 2
is_small = tf.math.less(n, max_exact)
val_if_large = max_exact + tf.cast(
tf.math.log(n / max_exact) / math.log(max_distance / max_exact) * (num_buckets - max_exact),
dtype=relative_position.dtype,
)
val_if_large = tf.math.minimum(val_if_large, num_buckets - 1)
ret += tf.where(is_small, n, val_if_large)
return ret
def compute_position_bias(self, x, position_ids=None):
"""Compute binned relative position bias"""
input_shape = shape_list(x)
qlen, klen = input_shape[1], input_shape[1]
if position_ids is not None:
context_position = position_ids[:, :, None]
memory_position = position_ids[:, None, :]
else:
context_position = tf.range(qlen)[:, None]
memory_position = tf.range(klen)[None, :]
relative_position = memory_position - context_position # shape (qlen, klen)
rp_bucket = self._relative_position_bucket(
relative_position,
num_buckets=self.relative_attention_num_buckets,
)
values = tf.gather(self.relative_attention_bias, rp_bucket) # shape (qlen, klen, num_heads)
values = tf.expand_dims(tf.transpose(values, [2, 0, 1]), axis=0) # shape (1, num_heads, qlen, klen)
return values
@keras_serializable
class TFMPNetMainLayer(tf.keras.layers.Layer):
config_class = MPNetConfig
def __init__(self, config, **kwargs):
super().__init__(**kwargs)
self.config = config
self.num_hidden_layers = config.num_hidden_layers
self.initializer_range = config.initializer_range
self.output_attentions = config.output_attentions
self.output_hidden_states = config.output_hidden_states
self.return_dict = config.use_return_dict
self.encoder = TFMPNetEncoder(config, name="encoder")
self.pooler = TFMPNetPooler(config, name="pooler")
# The embeddings must be the last declaration in order to follow the weights order
self.embeddings = TFMPNetEmbeddings(config, name="embeddings")
# Copied from transformers.models.bert.modeling_tf_bert.TFBertMainLayer.get_input_embeddings
def get_input_embeddings(self) -> tf.keras.layers.Layer:
return self.embeddings
# Copied from transformers.models.bert.modeling_tf_bert.TFBertMainLayer.set_input_embeddings
def set_input_embeddings(self, value: tf.Variable):
self.embeddings.weight = value
self.embeddings.vocab_size = shape_list(value)[0]
# Copied from transformers.models.bert.modeling_tf_bert.TFBertMainLayer._prune_heads
def _prune_heads(self, heads_to_prune):
"""
Prunes heads of the model. heads_to_prune: dict of {layer_num: list of heads to prune in this layer} See base
class PreTrainedModel
"""
raise NotImplementedError
@unpack_inputs
def call(
self,
input_ids=None,
attention_mask=None,
position_ids=None,
head_mask=None,
inputs_embeds=None,
output_attentions=None,
output_hidden_states=None,
return_dict=None,
training=False,
):
if input_ids is not None and inputs_embeds is not None:
raise ValueError("You cannot specify both input_ids and inputs_embeds at the same time")
elif input_ids is not None:
input_shape = shape_list(input_ids)
elif inputs_embeds is not None:
input_shape = shape_list(inputs_embeds)[:-1]
else:
raise ValueError("You have to specify either input_ids or inputs_embeds")
if attention_mask is None:
attention_mask = tf.fill(input_shape, 1)
embedding_output = self.embeddings(
input_ids,
position_ids,
inputs_embeds,
training=training,
)
# We create a 3D attention mask from a 2D tensor mask.
# Sizes are [batch_size, 1, 1, to_seq_length]
# So we can broadcast to [batch_size, num_heads, from_seq_length, to_seq_length]
# this attention mask is more simple than the triangular masking of causal attention
# used in OpenAI GPT, we just need to prepare the broadcast dimension here.
extended_attention_mask = tf.reshape(attention_mask, (input_shape[0], 1, 1, input_shape[1]))
# Since attention_mask is 1.0 for positions we want to attend and 0.0 for
# masked positions, this operation will create a tensor which is 0.0 for
# positions we want to attend and -10000.0 for masked positions.
# Since we are adding it to the raw scores before the softmax, this is
# effectively the same as removing these entirely.
extended_attention_mask = tf.cast(extended_attention_mask, embedding_output.dtype)
one_cst = tf.constant(1.0, dtype=embedding_output.dtype)
ten_thousand_cst = tf.constant(-10000.0, dtype=embedding_output.dtype)
extended_attention_mask = tf.multiply(tf.subtract(one_cst, extended_attention_mask), ten_thousand_cst)
# Prepare head mask if needed
# 1.0 in head_mask indicate we keep the head
# attention_probs has shape bsz x n_heads x N x N
# input head_mask has shape [num_heads] or [num_hidden_layers x num_heads]
# and head_mask is converted to shape [num_hidden_layers x batch x num_heads x seq_length x seq_length]
if head_mask is not None:
raise NotImplementedError
else:
head_mask = [None] * self.num_hidden_layers
encoder_outputs = self.encoder(
embedding_output,
extended_attention_mask,
head_mask,
output_attentions,
output_hidden_states,
return_dict,
training=training,
)
sequence_output = encoder_outputs[0]
pooled_output = self.pooler(sequence_output)
if not return_dict:
return (
sequence_output,
pooled_output,
) + encoder_outputs[1:]
return TFBaseModelOutputWithPooling(
last_hidden_state=sequence_output,
pooler_output=pooled_output,
hidden_states=encoder_outputs.hidden_states,
attentions=encoder_outputs.attentions,
)
MPNET_START_DOCSTRING = r"""
This model inherits from [`TFPreTrainedModel`]. Check the superclass documentation for the generic methods the
library implements for all its model (such as downloading or saving, resizing the input embeddings, pruning heads
etc.)
This model is also a [tf.keras.Model](https://www.tensorflow.org/api_docs/python/tf/keras/Model) subclass. Use it
as a regular TF 2.0 Keras Model and refer to the TF 2.0 documentation for all matter related to general usage and
behavior.
<Tip>
TensorFlow models and layers in `transformers` accept two formats as input:
- having all inputs as keyword arguments (like PyTorch models), or
- having all inputs as a list, tuple or dict in the first positional argument.
The reason the second format is supported is that Keras methods prefer this format when passing inputs to models
and layers. Because of this support, when using methods like `model.fit()` things should "just work" for you - just
pass your inputs and labels in any format that `model.fit()` supports! If, however, you want to use the second
format outside of Keras methods like `fit()` and `predict()`, such as when creating your own layers or models with
the Keras `Functional` API, there are three possibilities you can use to gather all the input Tensors in the first
positional argument:
- a single Tensor with `input_ids` only and nothing else: `model(input_ids)`
- a list of varying length with one or several input Tensors IN THE ORDER given in the docstring:
`model([input_ids, attention_mask])` or `model([input_ids, attention_mask, token_type_ids])`
- a dictionary with one or several input Tensors associated to the input names given in the docstring:
`model({"input_ids": input_ids, "token_type_ids": token_type_ids})`
Note that when creating models and layers with
[subclassing](https://keras.io/guides/making_new_layers_and_models_via_subclassing/) then you don't need to worry
about any of this, as you can just pass inputs like you would to any other Python function!
</Tip>
Args:
config ([`MPNetConfig`]): Model configuration class with all the parameters of the model.
Initializing with a config file does not load the weights associated with the model, only the
configuration. Check out the [`~PreTrainedModel.from_pretrained`] method to load the model weights.
"""
MPNET_INPUTS_DOCSTRING = r"""
Args:
input_ids (`Numpy array` or `tf.Tensor` of shape `({0})`):
Indices of input sequence tokens in the vocabulary.
Indices can be obtained using [`AutoTokenizer`]. See [`PreTrainedTokenizer.__call__`] and
[`PreTrainedTokenizer.encode`] for details.
[What are input IDs?](../glossary#input-ids)
attention_mask (`Numpy array` or `tf.Tensor` of shape `({0})`, *optional*):
Mask to avoid performing attention on padding token indices. Mask values selected in `[0, 1]`:
- 1 for tokens that are **not masked**,
- 0 for tokens that are **masked**.
[What are attention masks?](../glossary#attention-mask)
position_ids (`Numpy array` or `tf.Tensor` of shape `({0})`, *optional*):
Indices of positions of each input sequence tokens in the position embeddings. Selected in the range `[0,
config.max_position_embeddings - 1]`.
[What are position IDs?](../glossary#position-ids)
head_mask (`Numpy array` or `tf.Tensor` of shape `(num_heads,)` or `(num_layers, num_heads)`, *optional*):
Mask to nullify selected heads of the self-attention modules. Mask values selected in `[0, 1]`:
- 1 indicates the head is **not masked**,
- 0 indicates the head is **masked**.
inputs_embeds (`tf.Tensor` of shape `({0}, hidden_size)`, *optional*):
Optionally, instead of passing `input_ids` you can choose to directly pass an embedded representation. This
is useful if you want more control over how to convert `input_ids` indices into associated vectors than the
model's internal embedding lookup matrix.
output_attentions (`bool`, *optional*):
Whether or not to return the attentions tensors of all attention layers. See `attentions` under returned
tensors for more detail. This argument can be used only in eager mode, in graph mode the value in the
config will be used instead.
output_hidden_states (`bool`, *optional*):
Whether or not to return the hidden states of all layers. See `hidden_states` under returned tensors for
more detail. This argument can be used only in eager mode, in graph mode the value in the config will be
used instead.
return_dict (`bool`, *optional*):
Whether or not to return a [`~utils.ModelOutput`] instead of a plain tuple. This argument can be used in
eager mode, in graph mode the value will always be set to True.
training (`bool`, *optional*, defaults to `False`):
Whether or not to use the model in training mode (some modules like dropout modules have different
behaviors between training and evaluation).
"""
@add_start_docstrings(
"The bare MPNet Model transformer outputting raw hidden-states without any specific head on top.",
MPNET_START_DOCSTRING,
)
class TFMPNetModel(TFMPNetPreTrainedModel):
def __init__(self, config, *inputs, **kwargs):
super().__init__(config, *inputs, **kwargs)
self.mpnet = TFMPNetMainLayer(config, name="mpnet")
@unpack_inputs
@add_start_docstrings_to_model_forward(MPNET_INPUTS_DOCSTRING.format("batch_size, sequence_length"))
@add_code_sample_docstrings(
checkpoint=_CHECKPOINT_FOR_DOC,
output_type=TFBaseModelOutput,
config_class=_CONFIG_FOR_DOC,
)
def call(
self,
input_ids: TFModelInputType | None = None,
attention_mask: Optional[Union[np.array, tf.Tensor]] = None,
position_ids: Optional[Union[np.array, tf.Tensor]] = None,
head_mask: Optional[Union[np.array, tf.Tensor]] = None,
inputs_embeds: tf.Tensor | None = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
training: bool = False,
) -> Union[TFBaseModelOutput, Tuple[tf.Tensor]]:
outputs = self.mpnet(
input_ids=input_ids,
attention_mask=attention_mask,
position_ids=position_ids,
head_mask=head_mask,
inputs_embeds=inputs_embeds,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
training=training,
)
return outputs
class TFMPNetLMHead(tf.keras.layers.Layer):
"""MPNet head for masked and permuted language modeling"""
def __init__(self, config, input_embeddings, **kwargs):
super().__init__(**kwargs)
self.config = config
self.hidden_size = config.hidden_size
self.dense = tf.keras.layers.Dense(
config.hidden_size, kernel_initializer=get_initializer(config.initializer_range), name="dense"
)
self.layer_norm = tf.keras.layers.LayerNormalization(epsilon=config.layer_norm_eps, name="layer_norm")
self.act = get_tf_activation("gelu")
# The output weights are the same as the input embeddings, but there is
# an output-only bias for each token.
self.decoder = input_embeddings
def build(self, input_shape):
self.bias = self.add_weight(shape=(self.config.vocab_size,), initializer="zeros", trainable=True, name="bias")
super().build(input_shape)
def get_output_embeddings(self):
return self.decoder
def set_output_embeddings(self, value):
self.decoder.weight = value
self.decoder.vocab_size = shape_list(value)[0]
def get_bias(self):
return {"bias": self.bias}
def set_bias(self, value):
self.bias = value["bias"]
self.config.vocab_size = shape_list(value["bias"])[0]
def call(self, hidden_states):
hidden_states = self.dense(hidden_states)
hidden_states = self.act(hidden_states)
hidden_states = self.layer_norm(hidden_states)
# project back to size of vocabulary with bias
seq_length = shape_list(tensor=hidden_states)[1]
hidden_states = tf.reshape(tensor=hidden_states, shape=[-1, self.hidden_size])
hidden_states = tf.matmul(a=hidden_states, b=self.decoder.weight, transpose_b=True)
hidden_states = tf.reshape(tensor=hidden_states, shape=[-1, seq_length, self.config.vocab_size])
hidden_states = tf.nn.bias_add(value=hidden_states, bias=self.bias)
return hidden_states
@add_start_docstrings("""MPNet Model with a `language modeling` head on top.""", MPNET_START_DOCSTRING)
class TFMPNetForMaskedLM(TFMPNetPreTrainedModel, TFMaskedLanguageModelingLoss):
_keys_to_ignore_on_load_missing = [r"pooler"]
def __init__(self, config, *inputs, **kwargs):
super().__init__(config, *inputs, **kwargs)
self.mpnet = TFMPNetMainLayer(config, name="mpnet")
self.lm_head = TFMPNetLMHead(config, self.mpnet.embeddings, name="lm_head")
def get_lm_head(self):
return self.lm_head
def get_prefix_bias_name(self):
warnings.warn("The method get_prefix_bias_name is deprecated. Please use `get_bias` instead.", FutureWarning)
return self.name + "/" + self.lm_head.name
@unpack_inputs
@add_start_docstrings_to_model_forward(MPNET_INPUTS_DOCSTRING.format("batch_size, sequence_length"))
@add_code_sample_docstrings(
checkpoint=_CHECKPOINT_FOR_DOC,
output_type=TFMaskedLMOutput,
config_class=_CONFIG_FOR_DOC,
)
def call(
self,
input_ids: TFModelInputType | None = None,
attention_mask: np.ndarray | tf.Tensor | None = None,
position_ids: np.ndarray | tf.Tensor | None = None,
head_mask: np.ndarray | tf.Tensor | None = None,
inputs_embeds: tf.Tensor | None = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
labels: tf.Tensor | None = None,
training: bool = False,
) -> Union[TFMaskedLMOutput, Tuple[tf.Tensor]]:
r"""
labels (`tf.Tensor` of shape `(batch_size, sequence_length)`, *optional*):
Labels for computing the masked language modeling loss. Indices should be in `[-100, 0, ...,
config.vocab_size]` (see `input_ids` docstring) Tokens with indices set to `-100` are ignored (masked), the
loss is only computed for the tokens with labels in `[0, ..., config.vocab_size]`
"""
outputs = self.mpnet(
input_ids,
attention_mask=attention_mask,
position_ids=position_ids,
head_mask=head_mask,
inputs_embeds=inputs_embeds,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
training=training,
)
sequence_output = outputs[0]
prediction_scores = self.lm_head(sequence_output)
loss = None if labels is None else self.hf_compute_loss(labels, prediction_scores)
if not return_dict:
output = (prediction_scores,) + outputs[2:]
return ((loss,) + output) if loss is not None else output
return TFMaskedLMOutput(
loss=loss,
logits=prediction_scores,
hidden_states=outputs.hidden_states,
attentions=outputs.attentions,
)
class TFMPNetClassificationHead(tf.keras.layers.Layer):
"""Head for sentence-level classification tasks."""
def __init__(self, config, **kwargs):
super().__init__(**kwargs)
self.dense = tf.keras.layers.Dense(
config.hidden_size,
kernel_initializer=get_initializer(config.initializer_range),
activation="tanh",
name="dense",
)
self.dropout = tf.keras.layers.Dropout(config.hidden_dropout_prob)
self.out_proj = tf.keras.layers.Dense(
config.num_labels, kernel_initializer=get_initializer(config.initializer_range), name="out_proj"
)
def call(self, features, training=False):
x = features[:, 0, :] # take <s> token (equiv. to [CLS])
x = self.dropout(x, training=training)
x = self.dense(x)
x = self.dropout(x, training=training)
x = self.out_proj(x)
return x
@add_start_docstrings(
"""
MPNet Model transformer with a sequence classification/regression head on top (a linear layer on top of the pooled
output) e.g. for GLUE tasks.
""",
MPNET_START_DOCSTRING,
)
class TFMPNetForSequenceClassification(TFMPNetPreTrainedModel, TFSequenceClassificationLoss):
_keys_to_ignore_on_load_missing = [r"pooler"]
def __init__(self, config, *inputs, **kwargs):
super().__init__(config, *inputs, **kwargs)
self.num_labels = config.num_labels
self.mpnet = TFMPNetMainLayer(config, name="mpnet")
self.classifier = TFMPNetClassificationHead(config, name="classifier")
@unpack_inputs
@add_start_docstrings_to_model_forward(MPNET_INPUTS_DOCSTRING.format("batch_size, sequence_length"))
@add_code_sample_docstrings(
checkpoint=_CHECKPOINT_FOR_DOC,
output_type=TFSequenceClassifierOutput,
config_class=_CONFIG_FOR_DOC,
)
def call(
self,
input_ids: TFModelInputType | None = None,
attention_mask: Optional[Union[np.array, tf.Tensor]] = None,
position_ids: Optional[Union[np.array, tf.Tensor]] = None,
head_mask: Optional[Union[np.array, tf.Tensor]] = None,
inputs_embeds: tf.Tensor | None = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
labels: tf.Tensor | None = None,
training: bool = False,
) -> Union[TFSequenceClassifierOutput, Tuple[tf.Tensor]]:
r"""
labels (`tf.Tensor` of shape `(batch_size,)`, *optional*):
Labels for computing the sequence classification/regression loss. Indices should be in `[0, ...,
config.num_labels - 1]`. If `config.num_labels == 1` a regression loss is computed (Mean-Square loss), If
`config.num_labels > 1` a classification loss is computed (Cross-Entropy).
"""
outputs = self.mpnet(
input_ids,
attention_mask=attention_mask,
position_ids=position_ids,
head_mask=head_mask,
inputs_embeds=inputs_embeds,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
training=training,
)
sequence_output = outputs[0]
logits = self.classifier(sequence_output, training=training)
loss = None if labels is None else self.hf_compute_loss(labels, logits)
if not return_dict:
output = (logits,) + outputs[2:]
return ((loss,) + output) if loss is not None else output
return TFSequenceClassifierOutput(
loss=loss,
logits=logits,
hidden_states=outputs.hidden_states,
attentions=outputs.attentions,
)
@add_start_docstrings(
"""
MPNet Model with a multiple choice classification head on top (a linear layer on top of the pooled output and a
softmax) e.g. for RocStories/SWAG tasks.
""",
MPNET_START_DOCSTRING,
)
class TFMPNetForMultipleChoice(TFMPNetPreTrainedModel, TFMultipleChoiceLoss):
def __init__(self, config, *inputs, **kwargs):
super().__init__(config, *inputs, **kwargs)
self.mpnet = TFMPNetMainLayer(config, name="mpnet")
self.dropout = tf.keras.layers.Dropout(config.hidden_dropout_prob)
self.classifier = tf.keras.layers.Dense(
1, kernel_initializer=get_initializer(config.initializer_range), name="classifier"
)
@unpack_inputs
@add_start_docstrings_to_model_forward(MPNET_INPUTS_DOCSTRING.format("batch_size, num_choices, sequence_length"))
@add_code_sample_docstrings(
checkpoint=_CHECKPOINT_FOR_DOC,
output_type=TFMultipleChoiceModelOutput,
config_class=_CONFIG_FOR_DOC,
)
def call(
self,
input_ids: TFModelInputType | None = None,
attention_mask: np.ndarray | tf.Tensor | None = None,
position_ids: np.ndarray | tf.Tensor | None = None,
head_mask: np.ndarray | tf.Tensor | None = None,
inputs_embeds: tf.Tensor | None = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
labels: tf.Tensor | None = None,
training: bool = False,
) -> Union[TFMultipleChoiceModelOutput, Tuple[tf.Tensor]]:
r"""
labels (`tf.Tensor` of shape `(batch_size,)`, *optional*):
Labels for computing the multiple choice classification loss. Indices should be in `[0, ..., num_choices]`
where `num_choices` is the size of the second dimension of the input tensors. (See `input_ids` above)
"""
if input_ids is not None:
num_choices = shape_list(input_ids)[1]
seq_length = shape_list(input_ids)[2]
else:
num_choices = shape_list(inputs_embeds)[1]
seq_length = shape_list(inputs_embeds)[2]
flat_input_ids = tf.reshape(input_ids, (-1, seq_length)) if input_ids is not None else None
flat_attention_mask = tf.reshape(attention_mask, (-1, seq_length)) if attention_mask is not None else None
flat_position_ids = tf.reshape(position_ids, (-1, seq_length)) if position_ids is not None else None
flat_inputs_embeds = (
tf.reshape(inputs_embeds, (-1, seq_length, shape_list(inputs_embeds)[3]))
if inputs_embeds is not None
else None
)
outputs = self.mpnet(
flat_input_ids,
flat_attention_mask,
flat_position_ids,
head_mask,
flat_inputs_embeds,
output_attentions,
output_hidden_states,
return_dict=return_dict,
training=training,
)
pooled_output = outputs[1]
pooled_output = self.dropout(pooled_output, training=training)
logits = self.classifier(pooled_output)
reshaped_logits = tf.reshape(logits, (-1, num_choices))
loss = None if labels is None else self.hf_compute_loss(labels, reshaped_logits)
if not return_dict:
output = (reshaped_logits,) + outputs[2:]
return ((loss,) + output) if loss is not None else output
return TFMultipleChoiceModelOutput(
loss=loss,
logits=reshaped_logits,
hidden_states=outputs.hidden_states,
attentions=outputs.attentions,
)
@add_start_docstrings(
"""
MPNet Model with a token classification head on top (a linear layer on top of the hidden-states output) e.g. for
Named-Entity-Recognition (NER) tasks.
""",
MPNET_START_DOCSTRING,
)
class TFMPNetForTokenClassification(TFMPNetPreTrainedModel, TFTokenClassificationLoss):
_keys_to_ignore_on_load_missing = [r"pooler"]
def __init__(self, config, *inputs, **kwargs):
super().__init__(config, *inputs, **kwargs)
self.num_labels = config.num_labels
self.mpnet = TFMPNetMainLayer(config, name="mpnet")
self.dropout = tf.keras.layers.Dropout(config.hidden_dropout_prob)
self.classifier = tf.keras.layers.Dense(
config.num_labels, kernel_initializer=get_initializer(config.initializer_range), name="classifier"
)
@unpack_inputs
@add_start_docstrings_to_model_forward(MPNET_INPUTS_DOCSTRING.format("batch_size, sequence_length"))
@add_code_sample_docstrings(
checkpoint=_CHECKPOINT_FOR_DOC,
output_type=TFTokenClassifierOutput,
config_class=_CONFIG_FOR_DOC,
)
def call(
self,
input_ids: TFModelInputType | None = None,
attention_mask: np.ndarray | tf.Tensor | None = None,
position_ids: np.ndarray | tf.Tensor | None = None,
head_mask: np.ndarray | tf.Tensor | None = None,
inputs_embeds: tf.Tensor | None = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
labels: tf.Tensor | None = None,
training: bool = False,
) -> Union[TFTokenClassifierOutput, Tuple[tf.Tensor]]:
r"""
labels (`tf.Tensor` of shape `(batch_size, sequence_length)`, *optional*):
Labels for computing the token classification loss. Indices should be in `[0, ..., config.num_labels - 1]`.
"""
outputs = self.mpnet(
input_ids=input_ids,
attention_mask=attention_mask,
position_ids=position_ids,
head_mask=head_mask,
inputs_embeds=inputs_embeds,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
training=training,
)
sequence_output = outputs[0]
sequence_output = self.dropout(sequence_output, training=training)
logits = self.classifier(sequence_output)
loss = None if labels is None else self.hf_compute_loss(labels, logits)
if not return_dict:
output = (logits,) + outputs[1:]
return ((loss,) + output) if loss is not None else output
return TFTokenClassifierOutput(
loss=loss,
logits=logits,
hidden_states=outputs.hidden_states,
attentions=outputs.attentions,
)
@add_start_docstrings(
"""
MPNet Model with a span classification head on top for extractive question-answering tasks like SQuAD (a linear
layers on top of the hidden-states output to compute `span start logits` and `span end logits`).
""",
MPNET_START_DOCSTRING,
)
class TFMPNetForQuestionAnswering(TFMPNetPreTrainedModel, TFQuestionAnsweringLoss):
_keys_to_ignore_on_load_missing = [r"pooler"]
def __init__(self, config, *inputs, **kwargs):
super().__init__(config, *inputs, **kwargs)
self.num_labels = config.num_labels
self.mpnet = TFMPNetMainLayer(config, name="mpnet")
self.qa_outputs = tf.keras.layers.Dense(
config.num_labels, kernel_initializer=get_initializer(config.initializer_range), name="qa_outputs"
)
@unpack_inputs
@add_start_docstrings_to_model_forward(MPNET_INPUTS_DOCSTRING.format("batch_size, sequence_length"))
@add_code_sample_docstrings(
checkpoint=_CHECKPOINT_FOR_DOC,
output_type=TFQuestionAnsweringModelOutput,
config_class=_CONFIG_FOR_DOC,
)
def call(
self,
input_ids: TFModelInputType | None = None,
attention_mask: Optional[Union[np.array, tf.Tensor]] = None,
position_ids: Optional[Union[np.array, tf.Tensor]] = None,
head_mask: Optional[Union[np.array, tf.Tensor]] = None,
inputs_embeds: tf.Tensor | None = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
start_positions: tf.Tensor | None = None,
end_positions: tf.Tensor | None = None,
training: bool = False,
**kwargs,
) -> Union[TFQuestionAnsweringModelOutput, Tuple[tf.Tensor]]:
r"""
start_positions (`tf.Tensor` of shape `(batch_size,)`, *optional*):
Labels for position (index) of the start of the labelled span for computing the token classification loss.
Positions are clamped to the length of the sequence (`sequence_length`). Position outside of the sequence
are not taken into account for computing the loss.
end_positions (`tf.Tensor` of shape `(batch_size,)`, *optional*):
Labels for position (index) of the end of the labelled span for computing the token classification loss.
Positions are clamped to the length of the sequence (`sequence_length`). Position outside of the sequence
are not taken into account for computing the loss.
"""
outputs = self.mpnet(
input_ids,
attention_mask=attention_mask,
position_ids=position_ids,
head_mask=head_mask,
inputs_embeds=inputs_embeds,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
training=training,
)
sequence_output = outputs[0]
logits = self.qa_outputs(sequence_output)
start_logits, end_logits = tf.split(logits, 2, axis=-1)
start_logits = tf.squeeze(start_logits, axis=-1)
end_logits = tf.squeeze(end_logits, axis=-1)
loss = None
if start_positions is not None and end_positions is not None:
labels = {"start_position": start_positions, "end_position": end_positions}
loss = self.hf_compute_loss(labels, (start_logits, end_logits))
if not return_dict:
output = (start_logits, end_logits) + outputs[2:]
return ((loss,) + output) if loss is not None else output
return TFQuestionAnsweringModelOutput(
loss=loss,
start_logits=start_logits,
end_logits=end_logits,
hidden_states=outputs.hidden_states,
attentions=outputs.attentions,
)
| 48,395 | 40.648881 | 132 | py |
transformers | transformers-main/src/transformers/models/prophetnet/convert_prophetnet_original_pytorch_checkpoint_to_pytorch.py | # coding=utf-8
# Copyright 2020 The HuggingFace Inc. team.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
"""Convert ProphetNet checkpoint."""
import argparse
from torch import nn
# transformers_old should correspond to branch `save_old_prophetnet_model_structure` here
# original prophetnet_checkpoints are saved under `patrickvonplaten/..._old` respectively
from transformers_old.modeling_prophetnet import (
ProphetNetForConditionalGeneration as ProphetNetForConditionalGenerationOld,
)
from transformers_old.modeling_xlm_prophetnet import (
XLMProphetNetForConditionalGeneration as XLMProphetNetForConditionalGenerationOld,
)
from transformers import ProphetNetForConditionalGeneration, XLMProphetNetForConditionalGeneration, logging
logger = logging.get_logger(__name__)
logging.set_verbosity_info()
def convert_prophetnet_checkpoint_to_pytorch(prophetnet_checkpoint_path: str, pytorch_dump_folder_path: str):
"""
Copy/paste/tweak prohpetnet's weights to our prophetnet structure.
"""
if "xprophetnet" in prophetnet_checkpoint_path:
prophet_old = XLMProphetNetForConditionalGenerationOld.from_pretrained(prophetnet_checkpoint_path)
prophet, loading_info = XLMProphetNetForConditionalGeneration.from_pretrained(
prophetnet_checkpoint_path, output_loading_info=True
)
else:
prophet_old = ProphetNetForConditionalGenerationOld.from_pretrained(prophetnet_checkpoint_path)
prophet, loading_info = ProphetNetForConditionalGeneration.from_pretrained(
prophetnet_checkpoint_path, output_loading_info=True
)
special_keys = ["key_proj", "value_proj", "query_proj"]
mapping = {
"self_attn": "ngram_self_attn",
"cross_attn": "encoder_attn",
"cross_attn_layer_norm": "encoder_attn_layer_norm",
"feed_forward_layer_norm": "final_layer_norm",
"feed_forward": "",
"intermediate": "fc1",
"output": "fc2",
"key_proj": "k_proj",
"query_proj": "q_proj",
"value_proj": "v_proj",
"word_embeddings": "embed_tokens",
"embeddings_layer_norm": "emb_layer_norm",
"relative_pos_embeddings": "relative_linear",
"ngram_embeddings": "ngram_input_embed",
"position_embeddings": "embed_positions",
}
for key in loading_info["missing_keys"]:
attributes = key.split(".")
if attributes[0] == "lm_head":
model = prophet
old_model = prophet_old
else:
model = prophet.prophetnet
old_model = prophet_old.model
is_key_init = False
for attribute in attributes:
if attribute in mapping:
old_attribute = mapping[attribute]
if not hasattr(old_model, old_attribute) and len(old_attribute) > 0:
old_attribute = attribute
elif hasattr(old_model, attribute):
old_attribute = attribute
if attribute == "weight":
assert old_model.weight.shape == model.weight.shape, "Shapes have to match!"
model.weight = old_model.weight
logger.info(f"{attribute} is initialized.")
is_key_init = True
break
elif attribute == "bias":
assert old_model.bias.shape == model.bias.shape, "Shapes have to match!"
model.bias = old_model.bias
logger.info(f"{attribute} is initialized")
is_key_init = True
break
elif attribute in special_keys and hasattr(old_model, "in_proj_weight"):
embed_dim = old_model.in_proj_weight.shape[0] // 3
param = getattr(model, attribute)
param.weight.shape == old_model.in_proj_weight[:embed_dim, :].shape, "Shapes have to match"
param.bias.shape == old_model.in_proj_bias[:embed_dim].shape, "Shapes have to match"
if attribute == "query_proj":
model.query_proj.weight = nn.Parameter(old_model.in_proj_weight[:embed_dim, :])
model.query_proj.bias = nn.Parameter(old_model.in_proj_bias[:embed_dim])
elif attribute == "key_proj":
model.key_proj.weight = nn.Parameter(old_model.in_proj_weight[embed_dim : 2 * embed_dim, :])
model.key_proj.bias = nn.Parameter(old_model.in_proj_bias[embed_dim : 2 * embed_dim])
elif attribute == "value_proj":
model.value_proj.weight = nn.Parameter(old_model.in_proj_weight[2 * embed_dim :, :])
model.value_proj.bias = nn.Parameter(old_model.in_proj_bias[2 * embed_dim :])
is_key_init = True
break
elif attribute == "position_embeddings":
assert (
model.position_embeddings.weight.shape[-1] == old_model.embed_positions.weight.shape[-1]
), "Hidden size has to match"
assert model.position_embeddings.weight.shape[0] == 512, "We want 512 position_embeddings."
model.position_embeddings.weight = nn.Parameter(old_model.embed_positions.weight[:512, :])
is_key_init = True
break
if attribute.isdigit():
model = model[int(attribute)]
old_model = old_model[int(old_attribute)]
else:
model = getattr(model, attribute)
if old_attribute == "":
old_model = old_model
else:
if not hasattr(old_model, old_attribute):
raise ValueError(f"{old_model} does not have {old_attribute}")
old_model = getattr(old_model, old_attribute)
if not is_key_init:
raise ValueError(f"{key} was not correctly initialized!")
print(f"Saving model to {pytorch_dump_folder_path}")
prophet.save_pretrained(pytorch_dump_folder_path)
if __name__ == "__main__":
parser = argparse.ArgumentParser()
# Required parameters
parser.add_argument(
"--prophetnet_checkpoint_path", default=None, type=str, required=True, help="Path the official PyTorch dump."
)
parser.add_argument(
"--pytorch_dump_folder_path", default=None, type=str, required=True, help="Path to the output PyTorch model."
)
args = parser.parse_args()
convert_prophetnet_checkpoint_to_pytorch(args.prophetnet_checkpoint_path, args.pytorch_dump_folder_path)
| 7,055 | 42.826087 | 117 | py |
transformers | transformers-main/src/transformers/models/prophetnet/__init__.py | # Copyright 2020 The HuggingFace Team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
from typing import TYPE_CHECKING
from ...utils import OptionalDependencyNotAvailable, _LazyModule, is_torch_available
_import_structure = {
"configuration_prophetnet": ["PROPHETNET_PRETRAINED_CONFIG_ARCHIVE_MAP", "ProphetNetConfig"],
"tokenization_prophetnet": ["ProphetNetTokenizer"],
}
try:
if not is_torch_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
_import_structure["modeling_prophetnet"] = [
"PROPHETNET_PRETRAINED_MODEL_ARCHIVE_LIST",
"ProphetNetDecoder",
"ProphetNetEncoder",
"ProphetNetForCausalLM",
"ProphetNetForConditionalGeneration",
"ProphetNetModel",
"ProphetNetPreTrainedModel",
]
if TYPE_CHECKING:
from .configuration_prophetnet import PROPHETNET_PRETRAINED_CONFIG_ARCHIVE_MAP, ProphetNetConfig
from .tokenization_prophetnet import ProphetNetTokenizer
try:
if not is_torch_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
from .modeling_prophetnet import (
PROPHETNET_PRETRAINED_MODEL_ARCHIVE_LIST,
ProphetNetDecoder,
ProphetNetEncoder,
ProphetNetForCausalLM,
ProphetNetForConditionalGeneration,
ProphetNetModel,
ProphetNetPreTrainedModel,
)
else:
import sys
sys.modules[__name__] = _LazyModule(__name__, globals()["__file__"], _import_structure, module_spec=__spec__)
| 2,157 | 31.69697 | 113 | py |
transformers | transformers-main/src/transformers/models/prophetnet/modeling_prophetnet.py | # coding=utf-8
# Copyright 2020 The Microsoft Authors and The HuggingFace Inc. team.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
""" PyTorch ProphetNet model, ported from ProphetNet repo(fairsequery_states version)."""
import copy
import math
import warnings
from dataclasses import dataclass
from typing import Optional, Tuple, Union
import torch
import torch.utils.checkpoint
from torch import Tensor, nn
from torch.nn import LayerNorm
from ...activations import ACT2FN
from ...modeling_outputs import BaseModelOutput
from ...modeling_utils import PreTrainedModel
from ...utils import (
ModelOutput,
add_start_docstrings,
add_start_docstrings_to_model_forward,
logging,
replace_return_docstrings,
)
from .configuration_prophetnet import ProphetNetConfig
logger = logging.get_logger(__name__)
_CONFIG_FOR_DOC = "ProphenetConfig"
_CHECKPOINT_FOR_DOC = "microsoft/prophetnet-large-uncased"
PROPHETNET_PRETRAINED_MODEL_ARCHIVE_LIST = [
"microsoft/prophetnet-large-uncased",
# See all ProphetNet models at https://huggingface.co/models?filter=prophetnet
]
PROPHETNET_START_DOCSTRING = r"""
This model inherits from [`PreTrainedModel`]. Check the superclass documentation for the generic methods the
library implements for all its model (such as downloading or saving, resizing the input embeddings, pruning heads
etc.)
Original ProphetNet code can be found [here](https://github.com/microsoft/ProphetNet). Checkpoints were converted
from original Fairseq checkpoints. For more information on the checkpoint conversion, please take a look at the
file `convert_prophetnet_original_pytorch_checkpoint_to_pytorch.py`.
This model is a PyTorch [torch.nn.Module](https://pytorch.org/docs/stable/nn.html#torch.nn.Module) sub-class. Use
it as a regular PyTorch Module and refer to the PyTorch documentation for all matters related to general usage and
behavior.
Parameters:
config ([`ProphetNetConfig`]): Model configuration class with all the parameters of the model.
Initializing with a config file does not load the weights associated with the model, only the
configuration. Check out the [`~PreTrainedModel.from_pretrained`] method to load the model weights.
"""
PROPHETNET_INPUTS_DOCSTRING = r"""
Args:
input_ids (`torch.LongTensor` of shape `(batch_size, sequence_length)`):
Indices of input sequence tokens in the vocabulary. Padding will be ignored by default should you provide
it.
Indices can be obtained using [`AutoTokenizer`]. See [`PreTrainedTokenizer.encode`] and
[`PreTrainedTokenizer.__call__`] for details.
[What are input IDs?](../glossary#input-ids)
attention_mask (`torch.Tensor` of shape `(batch_size, sequence_length)`, *optional*):
Mask to avoid performing attention on padding token indices. Mask values selected in `[0, 1]`:
- 1 for tokens that are **not masked**,
- 0 for tokens that are **masked**.
[What are attention masks?](../glossary#attention-mask)
decoder_input_ids (`torch.LongTensor` of shape `(batch_size, target_sequence_length)`, *optional*):
Indices of decoder input sequence tokens in the vocabulary.
Indices can be obtained using [`AutoTokenizer`]. See [`PreTrainedTokenizer.encode`] and
[`PreTrainedTokenizer.__call__`] for details.
[What are decoder input IDs?](../glossary#decoder-input-ids)
ProphetNet uses the `eos_token_id` as the starting token for `decoder_input_ids` generation. If
`past_key_values` is used, optionally only the last `decoder_input_ids` have to be input (see
`past_key_values`).
decoder_attention_mask (`torch.BoolTensor` of shape `(batch_size, target_sequence_length)`, *optional*):
Default behavior: generate a tensor that ignores pad tokens in `decoder_input_ids`. Causal mask will also
be used by default.
head_mask (`torch.Tensor` of shape `(encoder_layers, encoder_attention_heads)`, *optional*):
Mask to nullify selected heads of the attention modules in the encoder. Mask values selected in `[0, 1]`:
- 1 indicates the head is **not masked**,
- 0 indicates the head is **masked**.
decoder_head_mask (`torch.Tensor` of shape `(decoder_layers, decoder_attention_heads)`, *optional*):
Mask to nullify selected heads of the attention modules in the decoder. Mask values selected in `[0, 1]`:
- 1 indicates the head is **not masked**,
- 0 indicates the head is **masked**.
cross_attn_head_mask (`torch.Tensor` of shape `(decoder_layers, decoder_attention_heads)`, *optional*):
Mask to nullify selected heads of the cross-attention modules. Mask values selected in `[0, 1]`:
- 1 indicates the head is **not masked**,
- 0 indicates the head is **masked**.
encoder_outputs (`tuple(tuple(torch.FloatTensor)`, *optional*):
Tuple consists of (`last_hidden_state`, *optional*: `hidden_states`, *optional*: `attentions`)
`last_hidden_state` of shape `(batch_size, sequence_length, hidden_size)`, *optional*) is a sequence of
hidden-states at the output of the last layer of the encoder. Used in the cross-attention of the decoder.
past_key_values (`tuple(tuple(torch.FloatTensor))` of length `config.n_layers` with each tuple having 4 tensors of shape `(batch_size, num_heads, sequence_length - 1, embed_size_per_head)`):
Contains precomputed key and value hidden-states of the attention blocks. Can be used to speed up decoding.
If `past_key_values` are used, the user can optionally input only the last `decoder_input_ids` (those that
don't have their past key value states given to this model) of shape `(batch_size, 1)` instead of all
`decoder_input_ids` of shape `(batch_size, sequence_length)`.
use_cache (`bool`, *optional*):
If set to `True`, `past_key_values` key value states are returned and can be used to speed up decoding (see
`past_key_values`).
output_attentions (`bool`, *optional*):
Whether or not to return the attentions tensors of all attention layers. See `attentions` under returned
tensors for more detail.
output_hidden_states (`bool`, *optional*):
Whether or not to return the hidden states of all layers. See `hidden_states` under returned tensors for
more detail.
return_dict (`bool`, *optional*):
Whether or not to return a [`~utils.ModelOutput`] instead of a plain tuple.
"""
PROPHETNET_STANDALONE_INPUTS_DOCSTRING = r"""
Args:
input_ids (`torch.LongTensor` of shape `(batch_size, sequence_length)`):
Indices of input sequence tokens in the vocabulary. Padding will be ignored by default should you provide
it.
Indices can be obtained using [`AutoTokenizer`]. See [`PreTrainedTokenizer.encode`] and
[`PreTrainedTokenizer.__call__`] for details.
[What are input IDs?](../glossary#input-ids)
attention_mask (`torch.Tensor` of shape `(batch_size, sequence_length)`, *optional*):
Mask to avoid performing attention on padding token indices. Mask values selected in `[0, 1]`:
- 1 for tokens that are **not masked**,
- 0 for tokens that are **masked**.
[What are attention masks?](../glossary#attention-mask)
head_mask (`torch.Tensor` of shape `(encoder_layers, encoder_attention_heads)`, *optional*):
Mask to nullify selected heads of the attention modules in the encoder. Mask values selected in `[0, 1]`:
- 1 indicates the head is **not masked**,
- 0 indicates the head is **masked**.
output_attentions (`bool`, *optional*):
Whether or not to return the attentions tensors of all attention layers. See `attentions` under returned
tensors for more detail.
output_hidden_states (`bool`, *optional*):
Whether or not to return the hidden states of all layers. See `hidden_states` under returned tensors for
more detail.
return_dict (`bool`, *optional*):
Whether or not to return a [`~utils.ModelOutput`] instead of a plain tuple.
"""
def softmax(hidden_state, dim, onnx_trace=False):
if onnx_trace:
return nn.functional.softmax(hidden_state.float(), dim=dim)
else:
return nn.functional.softmax(hidden_state, dim=dim, dtype=torch.float32)
def ngram_attention_bias(sequence_length, ngram, device, dtype):
"""
This function computes the bias for the predict stream
"""
left_block = (
torch.ones((ngram, sequence_length, sequence_length), device=device, dtype=dtype) * torch.finfo(dtype).min
)
right_block = left_block.detach().clone()
# create bias
for stream_idx in range(ngram):
right_block[stream_idx].fill_diagonal_(0, wrap=False)
left_block[stream_idx].triu_(-stream_idx + 1)
left_block[:, :, 0] = 0
return torch.cat([left_block, right_block], dim=2)
def compute_relative_buckets(num_buckets, max_distance, relative_positions, is_bidirectional=False):
"""
This function computes individual parts of the relative position buckets. For more detail, see paper.
"""
inv_relative_positions = -relative_positions
rel_positions_bucket = 0
if is_bidirectional:
num_buckets = num_buckets // 2
rel_positions_bucket = (
rel_positions_bucket
+ torch.lt(inv_relative_positions, torch.zeros_like(inv_relative_positions)).int() * num_buckets
)
inv_relative_positions = torch.abs(inv_relative_positions)
else:
inv_relative_positions = torch.max(inv_relative_positions, torch.zeros_like(inv_relative_positions))
max_exact = num_buckets // 2
is_small = torch.lt(inv_relative_positions, max_exact)
val_if_large = max_exact + torch.log(inv_relative_positions.float() / max_exact) / math.log(
max_distance / max_exact
) * (num_buckets - max_exact)
val_if_large = torch.min(val_if_large, torch.ones_like(val_if_large) * (num_buckets - 1)).int()
rel_positions_bucket = rel_positions_bucket + torch.where(is_small, inv_relative_positions.int(), val_if_large)
return rel_positions_bucket
def compute_all_stream_relative_buckets(num_buckets, max_distance, position_ids):
"""
This function computes both main and predict relative position buckets. For more detail, see paper.
"""
# main stream
main_stream_relative_positions = position_ids.unsqueeze(1).repeat(1, position_ids.size(-1), 1)
main_stream_relative_positions = main_stream_relative_positions - position_ids.unsqueeze(-1)
# predicting stream
predicting_stream_relative_positions = torch.cat((position_ids - 1, position_ids), dim=-1).unsqueeze(1)
predicting_stream_relative_positions = predicting_stream_relative_positions.repeat(1, position_ids.size(-1), 1)
predicting_stream_relative_positions = predicting_stream_relative_positions - position_ids.unsqueeze(-1)
# get both position buckets
main_relative_position_buckets = compute_relative_buckets(
num_buckets, max_distance, main_stream_relative_positions, is_bidirectional=False
)
predict_relative_position_buckets = compute_relative_buckets(
num_buckets, max_distance, predicting_stream_relative_positions, is_bidirectional=False
)
return main_relative_position_buckets, predict_relative_position_buckets
@dataclass
class ProphetNetSeq2SeqLMOutput(ModelOutput):
"""
Base class for sequence-to-sequence language models outputs.
Args:
loss (`torch.FloatTensor` of shape `(1,)`, *optional*, returned when `labels` is provided):
Language modeling loss.
logits (`torch.FloatTensor` of shape `(batch_size, decoder_sequence_length, config.vocab_size)`):
Prediction scores of the main stream language modeling head (scores for each vocabulary token before
SoftMax).
logits_ngram (`torch.FloatTensor` of shape `(batch_size, ngram * decoder_sequence_length, config.vocab_size)`):
Prediction scores of the predict stream language modeling head (scores for each vocabulary token before
SoftMax).
past_key_values (`List[torch.FloatTensor]`, *optional*, returned when `use_cache=True` is passed or when `config.use_cache=True`):
List of `torch.FloatTensor` of length `config.n_layers`, with each tensor of shape `(2, batch_size,
num_attn_heads, decoder_sequence_length, embed_size_per_head)`).
Contains pre-computed hidden-states (key and values in the attention blocks) of the decoder that can be
used (see `past_key_values` input) to speed up sequential decoding.
decoder_hidden_states (`tuple(torch.FloatTensor)`, *optional*, returned when `output_hidden_states=True` is passed or when `config.output_hidden_states=True`):
Tuple of `torch.FloatTensor` (one for the output of the embeddings + one for the output of each layer) of
shape `(batch_size, decoder_sequence_length, hidden_size)`.
Hidden-states of main stream of the decoder at the output of each layer plus the initial embedding outputs.
decoder_ngram_hidden_states (`tuple(torch.FloatTensor)`, *optional*, returned when `output_hidden_states=True` is passed or when `config.output_hidden_states=True`):
Tuple of `torch.FloatTensor` (one for the output of the embeddings + one for the output of each layer) of
shape `(batch_size, ngram * decoder_sequence_length, hidden_size)`.
Hidden-states of the predict stream of the decoder at the output of each layer plus the initial embedding
outputs.
decoder_attentions (`tuple(torch.FloatTensor)`, *optional*, returned when `output_attentions=True` is passed or when `config.output_attentions=True`):
Tuple of `torch.FloatTensor` (one for each layer) of shape `(batch_size, num_attn_heads,
decoder_sequence_length, decoder_sequence_length)`.
Attentions weights of the decoder, after the attention softmax, used to compute the weighted average in the
self-attention heads.
decoder_ngram_attentions (`tuple(torch.FloatTensor)`, *optional*, returned when `output_attentions=True` is passed or when `config.output_attentions=True`):
Tuple of `torch.FloatTensor` (one for each layer) of shape `(batch_size, num_attn_heads,
decoder_sequence_length, decoder_sequence_length)`.
Attentions weights of the predict stream of the decoder, after the attention softmax, used to compute the
weighted average in the self-attention heads.
cross_attentions (`tuple(torch.FloatTensor)`, *optional*, returned when `output_attentions=True` is passed or when `config.output_attentions=True`):
Tuple of `torch.FloatTensor` (one for each layer) of shape `(batch_size, num_attn_heads,
encoder_sequence_length, decoder_sequence_length)`.
Attentions weights of the cross-attention layer of the decoder, after the attention softmax, used to
compute the weighted average in the
encoder_last_hidden_state (`torch.FloatTensor` of shape `(batch_size, encoder_sequence_length, hidden_size)`, *optional*):
Sequence of hidden-states at the output of the last layer of the encoder of the model.
encoder_hidden_states (`tuple(torch.FloatTensor)`, *optional*, returned when `output_hidden_states=True` is passed or when `config.output_hidden_states=True`):
Tuple of `torch.FloatTensor` (one for the output of the embeddings + one for the output of each layer) of
shape `(batch_size, encoder_sequence_length, hidden_size)`.
Hidden-states of the encoder at the output of each layer plus the initial embedding outputs.
encoder_attentions (`tuple(torch.FloatTensor)`, *optional*, returned when `output_attentions=True` is passed or when `config.output_attentions=True`):
Tuple of `torch.FloatTensor` (one for each layer) of shape `(batch_size, num_attn_heads,
encoder_sequence_length, encoder_sequence_length)`. Attentions weights of the encoder, after the attention
softmax, used to compute the weighted average in the self-attention heads.
"""
loss: Optional[torch.FloatTensor] = None
logits: torch.FloatTensor = None
logits_ngram: Optional[torch.FloatTensor] = None
past_key_values: Optional[Tuple[torch.FloatTensor]] = None
decoder_hidden_states: Optional[Tuple[torch.FloatTensor]] = None
decoder_ngram_hidden_states: Optional[Tuple[torch.FloatTensor]] = None
decoder_attentions: Optional[Tuple[torch.FloatTensor]] = None
decoder_ngram_attentions: Optional[Tuple[torch.FloatTensor]] = None
cross_attentions: Optional[Tuple[torch.FloatTensor]] = None
encoder_last_hidden_state: Optional[torch.FloatTensor] = None
encoder_hidden_states: Optional[Tuple[torch.FloatTensor]] = None
encoder_attentions: Optional[Tuple[torch.FloatTensor]] = None
@property
def decoder_cross_attentions(self):
warnings.warn(
"`decoder_cross_attentions` is deprecated and will be removed soon. Please use `cross_attentions`"
" instead.",
FutureWarning,
)
return self.cross_attentions
@dataclass
class ProphetNetSeq2SeqModelOutput(ModelOutput):
"""
Base class for model encoder's outputs that also contains : pre-computed hidden states that can speed up sequential
decoding.
Args:
last_hidden_state (`torch.FloatTensor` of shape `(batch_size, decoder_sequence_length, hidden_size)`):
Sequence of main stream hidden-states at the output of the last layer of the decoder of the model.
If `past_key_values` is used only the last hidden-state of the sequences of shape `(batch_size, 1,
hidden_size)` is output.
last_hidden_state_ngram (`torch.FloatTensor` of shape `(batch_size,ngram * decoder_sequence_length, config.vocab_size)`, *optional*):
Sequence of predict stream hidden-states at the output of the last layer of the decoder of the model.
past_key_values (`List[torch.FloatTensor]`, *optional*, returned when `use_cache=True` is passed or when `config.use_cache=True`):
List of `torch.FloatTensor` of length `config.n_layers`, with each tensor of shape `(2, batch_size,
num_attn_heads, decoder_sequence_length, embed_size_per_head)`).
Contains pre-computed hidden-states (key and values in the attention blocks) of the decoder that can be
used (see `past_key_values` input) to speed up sequential decoding.
decoder_hidden_states (`tuple(torch.FloatTensor)`, *optional*, returned when `output_hidden_states=True` is passed or when `config.output_hidden_states=True`):
Tuple of `torch.FloatTensor` (one for the output of the embeddings + one for the output of each layer) of
shape `(batch_size, decoder_sequence_length, hidden_size)`.
Hidden-states of main stream of the decoder at the output of each layer plus the initial embedding outputs.
decoder_ngram_hidden_states (`tuple(torch.FloatTensor)`, *optional*, returned when `output_hidden_states=True` is passed or when `config.output_hidden_states=True`):
Tuple of `torch.FloatTensor` (one for the output of the embeddings + one for the output of each layer) of
shape `(batch_size, ngram * decoder_sequence_length, hidden_size)`.
Hidden-states of the predict stream of the decoder at the output of each layer plus the initial embedding
outputs.
decoder_attentions (`tuple(torch.FloatTensor)`, *optional*, returned when `output_attentions=True` is passed or when `config.output_attentions=True`):
Tuple of `torch.FloatTensor` (one for each layer) of shape `(batch_size, num_attn_heads,
decoder_sequence_length, decoder_sequence_length)`.
Attentions weights of the decoder, after the attention softmax, used to compute the weighted average in the
self-attention heads.
decoder_ngram_attentions (`tuple(torch.FloatTensor)`, *optional*, returned when `output_attentions=True` is passed or when `config.output_attentions=True`):
Tuple of `torch.FloatTensor` (one for each layer) of shape `(batch_size, num_attn_heads,
decoder_sequence_length, decoder_sequence_length)`.
Attentions weights of the predict stream of the decoder, after the attention softmax, used to compute the
weighted average in the
cross_attentions (`tuple(torch.FloatTensor)`, *optional*, returned when `output_attentions=True` is passed or when `config.output_attentions=True`):
Tuple of `torch.FloatTensor` (one for each layer) of shape `(batch_size, num_attn_heads,
encoder_sequence_length, decoder_sequence_length)`.
Attentions weights of the cross-attention layer of the decoder, after the attention softmax, used to
compute the weighted average in the
encoder_last_hidden_state (`torch.FloatTensor` of shape `(batch_size, encoder_sequence_length, hidden_size)`, *optional*):
Sequence of hidden-states at the output of the last layer of the encoder of the model.
encoder_hidden_states (`tuple(torch.FloatTensor)`, *optional*, returned when `output_hidden_states=True` is passed or when `config.output_hidden_states=True`):
Tuple of `torch.FloatTensor` (one for the output of the embeddings + one for the output of each layer) of
shape `(batch_size, encoder_sequence_length, hidden_size)`.
Hidden-states of the encoder at the output of each layer plus the initial embedding outputs.
encoder_attentions (`tuple(torch.FloatTensor)`, *optional*, returned when `output_attentions=True` is passed or when `config.output_attentions=True`):
Tuple of `torch.FloatTensor` (one for each layer) of shape `(batch_size, num_attn_heads,
encoder_sequence_length, encoder_sequence_length)`.
Attentions weights of the encoder, after the attention softmax, used to compute the weighted average in the
self-attention heads.
"""
last_hidden_state: torch.FloatTensor
last_hidden_state_ngram: Optional[torch.FloatTensor] = None
past_key_values: Optional[Tuple[torch.FloatTensor]] = None
decoder_hidden_states: Optional[Tuple[torch.FloatTensor]] = None
decoder_ngram_hidden_states: Optional[Tuple[torch.FloatTensor]] = None
decoder_attentions: Optional[Tuple[torch.FloatTensor]] = None
decoder_ngram_attentions: Optional[Tuple[torch.FloatTensor]] = None
cross_attentions: Optional[Tuple[torch.FloatTensor]] = None
encoder_last_hidden_state: Optional[torch.FloatTensor] = None
encoder_hidden_states: Optional[Tuple[torch.FloatTensor]] = None
encoder_attentions: Optional[Tuple[torch.FloatTensor]] = None
@property
def decoder_cross_attentions(self):
warnings.warn(
"`decoder_cross_attentions` is deprecated and will be removed soon. Please use `cross_attentions`"
" instead.",
FutureWarning,
)
return self.cross_attentions
@dataclass
class ProphetNetDecoderModelOutput(ModelOutput):
"""
Base class for model's outputs that may also contain a past key/values (to speed up sequential decoding).
Args:
last_hidden_state (`torch.FloatTensor` of shape `(batch_size, decoder_sequence_length, hidden_size)`):
Sequence of main stream hidden-states at the output of the last layer of the decoder of the model.
If `past_key_values` is used only the last hidden-state of the sequences of shape `(batch_size, 1,
hidden_size)` is output.
last_hidden_state_ngram (`torch.FloatTensor` of shape `(batch_size, ngram * decoder_sequence_length, config.vocab_size)`):
Sequence of predict stream hidden-states at the output of the last layer of the decoder of the model.
past_key_values (`List[torch.FloatTensor]`, *optional*, returned when `use_cache=True` is passed or when `config.use_cache=True`):
List of `torch.FloatTensor` of length `config.n_layers`, with each tensor of shape `(2, batch_size,
num_attn_heads, decoder_sequence_length, embed_size_per_head)`).
Contains pre-computed hidden-states (key and values in the attention blocks) of the decoder that can be
used (see `past_key_values` input) to speed up sequential decoding.
hidden_states (`tuple(torch.FloatTensor)`, *optional*, returned when `output_hidden_states=True` is passed or when `config.output_hidden_states=True`):
Tuple of `torch.FloatTensor` (one for the output of the embeddings + one for the output of each layer) of
shape `(batch_size, decoder_sequence_length, hidden_size)`.
Hidden-states of main stream of the decoder at the output of each layer plus the initial embedding outputs.
ngram_hidden_states (`tuple(torch.FloatTensor)`, *optional*, returned when `output_hidden_states=True` is passed or when `config.output_hidden_states=True`):
Tuple of `torch.FloatTensor` (one for the output of the embeddings + one for the output of each layer) of
shape `(batch_size, ngram * decoder_sequence_length, hidden_size)`.
Hidden-states of the predict stream of the decoder at the output of each layer plus the initial embedding
outputs.
attentions (`tuple(torch.FloatTensor)`, *optional*, returned when `output_attentions=True` is passed or when `config.output_attentions=True`):
Tuple of `torch.FloatTensor` (one for each layer) of shape `(batch_size, num_attn_heads,
decoder_sequence_length, decoder_sequence_length)`.
Attentions weights of the decoder, after the attention softmax, used to compute the weighted average in the
self-attention heads.
ngram_attentions (`tuple(torch.FloatTensor)`, *optional*, returned when `output_attentions=True` is passed or when `config.output_attentions=True`):
Tuple of `torch.FloatTensor` (one for each layer) of shape `(batch_size, num_attn_heads,
decoder_sequence_length, decoder_sequence_length)`.
Attentions weights of the predict stream of the decoder, after the attention softmax, used to compute the
weighted average in the
cross_attentions (`tuple(torch.FloatTensor)`, *optional*, returned when `output_attentions=True` is passed or when `config.output_attentions=True`):
Tuple of `torch.FloatTensor` (one for each layer) of shape `(batch_size, num_attn_heads,
encoder_sequence_length, decoder_sequence_length)`.
Attentions weights of the cross-attention layer of the decoder, after the attention softmax, used to
compute the weighted average in the
"""
last_hidden_state: torch.FloatTensor
last_hidden_state_ngram: Optional[torch.FloatTensor] = None
past_key_values: Optional[Tuple[torch.FloatTensor]] = None
hidden_states: Optional[Tuple[torch.FloatTensor]] = None
hidden_states_ngram: Optional[Tuple[torch.FloatTensor]] = None
attentions: Optional[Tuple[torch.FloatTensor]] = None
ngram_attentions: Optional[Tuple[torch.FloatTensor]] = None
cross_attentions: Optional[Tuple[torch.FloatTensor]] = None
@dataclass
class ProphetNetDecoderLMOutput(ModelOutput):
"""
Base class for model's outputs that may also contain a past key/values (to speed up sequential decoding).
Args:
loss (`torch.FloatTensor` of shape `(1,)`, *optional*, returned when `labels` is provided):
Language modeling loss.
logits (`torch.FloatTensor` of shape `(batch_size, decoder_sequence_length, config.vocab_size)`):
Prediction scores of the main stream language modeling head (scores for each vocabulary token before
SoftMax).
logits_ngram (`torch.FloatTensor` of shape `(batch_size, ngram * decoder_sequence_length, config.vocab_size)`):
Prediction scores of the predict stream language modeling head (scores for each vocabulary token before
SoftMax).
past_key_values (`List[torch.FloatTensor]`, *optional*, returned when `use_cache=True` is passed or when `config.use_cache=True`):
List of `torch.FloatTensor` of length `config.n_layers`, with each tensor of shape `(2, batch_size,
num_attn_heads, decoder_sequence_length, embed_size_per_head)`).
Contains pre-computed hidden-states (key and values in the attention blocks) of the decoder that can be
used (see `past_key_values` input) to speed up sequential decoding.
hidden_states (`tuple(torch.FloatTensor)`, *optional*, returned when `output_hidden_states=True` is passed or when `config.output_hidden_states=True`):
Tuple of `torch.FloatTensor` (one for the output of the embeddings + one for the output of each layer) of
shape `(batch_size, decoder_sequence_length, hidden_size)`.
Hidden-states of main stream of the decoder at the output of each layer plus the initial embedding outputs.
ngram_hidden_states (`tuple(torch.FloatTensor)`, *optional*, returned when `output_hidden_states=True` is passed or when `config.output_hidden_states=True`):
Tuple of `torch.FloatTensor` (one for the output of the embeddings + one for the output of each layer) of
shape `(batch_size, ngram * decoder_sequence_length, hidden_size)`.
Hidden-states of the predict stream of the decoder at the output of each layer plus the initial embedding
outputs.
attentions (`tuple(torch.FloatTensor)`, *optional*, returned when `output_attentions=True` is passed or when `config.output_attentions=True`):
Tuple of `torch.FloatTensor` (one for each layer) of shape `(batch_size, num_attn_heads,
decoder_sequence_length, decoder_sequence_length)`.
Attentions weights of the decoder, after the attention softmax, used to compute the weighted average in the
self-attention heads.
ngram_attentions (`tuple(torch.FloatTensor)`, *optional*, returned when `output_attentions=True` is passed or when `config.output_attentions=True`):
Tuple of `torch.FloatTensor` (one for each layer) of shape `(batch_size, num_attn_heads,
decoder_sequence_length, decoder_sequence_length)`.
Attentions weights of the predict stream of the decoder, after the attention softmax, used to compute the
weighted average in the
cross_attentions (`tuple(torch.FloatTensor)`, *optional*, returned when `output_attentions=True` is passed or when `config.output_attentions=True`):
Tuple of `torch.FloatTensor` (one for each layer) of shape `(batch_size, num_attn_heads,
encoder_sequence_length, decoder_sequence_length)`.
Attentions weights of the cross-attention layer of the decoder, after the attention softmax, used to
compute the weighted average in the
"""
loss: Optional[torch.FloatTensor] = None
logits: torch.FloatTensor = None
logits_ngram: Optional[torch.FloatTensor] = None
past_key_values: Optional[Tuple[torch.FloatTensor]] = None
hidden_states: Optional[Tuple[torch.FloatTensor]] = None
hidden_states_ngram: Optional[Tuple[torch.FloatTensor]] = None
attentions: Optional[Tuple[torch.FloatTensor]] = None
ngram_attentions: Optional[Tuple[torch.FloatTensor]] = None
cross_attentions: Optional[Tuple[torch.FloatTensor]] = None
class ProphetNetPreTrainedModel(PreTrainedModel):
config_class = ProphetNetConfig
base_model_prefix = "prophetnet"
supports_gradient_checkpointing = True
def _init_weights(self, module):
if isinstance(module, nn.Linear):
module.weight.data.normal_(mean=0.0, std=self.config.init_std)
if module.bias is not None:
module.bias.data.zero_()
elif isinstance(module, nn.Embedding):
module.weight.data.normal_(mean=0.0, std=self.config.init_std)
if module.padding_idx is not None:
module.weight.data[module.padding_idx].zero_()
def _set_gradient_checkpointing(self, module, value=False):
if isinstance(module, (ProphetNetDecoder, ProphetNetEncoder)):
module.gradient_checkpointing = value
def _shift_right(self, input_ids):
decoder_start_token_id = self.config.decoder_start_token_id
pad_token_id = self.config.pad_token_id
assert decoder_start_token_id is not None, (
"self.model.config.decoder_start_token_id has to be defined. In ProphetNet it is usually set to the"
" pad_token_id. See ProphetNet docs for more information"
)
# shift inputs to the right
shifted_input_ids = input_ids.new_zeros(input_ids.shape)
shifted_input_ids[..., 1:] = input_ids[..., :-1].clone()
shifted_input_ids[..., 0] = decoder_start_token_id
assert pad_token_id is not None, "self.model.config.pad_token_id has to be defined."
# replace possible -100 values in labels by `pad_token_id`
shifted_input_ids.masked_fill_(shifted_input_ids == -100, pad_token_id)
assert torch.all(shifted_input_ids >= 0).item(), "Verify that `shifted_input_ids` has only positive values"
return shifted_input_ids
class ProphetNetPositionalEmbeddings(nn.Embedding):
"""
This module learns positional embeddings up to a fixed maximum size. Padding ids are ignored by either offsetting
based on padding_idx or by setting padding_idx to None and ensuring that the appropriate position ids are passed to
the forward function.
"""
def __init__(self, config: ProphetNetConfig) -> None:
self.max_length = config.max_position_embeddings
super().__init__(config.max_position_embeddings, config.hidden_size, config.pad_token_id)
def forward(self, inputs_shape, device, attention_mask=None, past_key_values=None, position_ids=None):
assert (position_ids is None) or (
self.padding_idx is None
), "If position_ids is pre-computed then padding_idx should not be set."
if position_ids is None:
if past_key_values is not None:
# position_ids is the same for every token when decoding a single step
# Without the int() cast, it doesn't work in some cases when exporting to ONNX
prev_num_input_ids = past_key_values[0][0].shape[2]
num_input_ids = inputs_shape[1] + prev_num_input_ids
position_ids = torch.ones((1, 1), dtype=torch.long, device=device) * (
int(self.padding_idx + num_input_ids)
)
else:
if attention_mask is None:
attention_mask = torch.ones(inputs_shape, dtype=torch.long, device=device)
# retrieve position_ids from input_ids / attention_mask
position_ids = (
torch.cumsum(attention_mask, dim=1).type_as(attention_mask) * attention_mask
).long() + self.padding_idx
# make sure position_ids are not bigger then max_length
position_ids = position_ids.clamp(0, self.max_length - 1)
return super().forward(position_ids), position_ids
def _forward(self, position_ids):
return super().forward(position_ids)
class ProphetNetAttention(nn.Module):
"""Multi-headed attention from 'Attention Is All You Need' paper"""
def __init__(
self,
config: ProphetNetConfig,
num_attn_heads: int,
):
super().__init__()
hidden_size = config.hidden_size
self.attention_dropout = config.attention_dropout
self.dropout = config.dropout
self.num_attn_heads = num_attn_heads
self.head_dim = hidden_size // num_attn_heads
assert self.head_dim * num_attn_heads == hidden_size, (
"`config.hidden_size` must be divisible by `config.num_encoder_attention_heads` and"
" `config.num_decoder_attention_heads`"
)
self.key_proj = nn.Linear(hidden_size, hidden_size)
self.value_proj = nn.Linear(hidden_size, hidden_size)
self.query_proj = nn.Linear(hidden_size, hidden_size)
self.out_proj = nn.Linear(hidden_size, hidden_size)
def _shape(self, tensor: torch.Tensor, seq_len: int, bsz: int):
return tensor.view(bsz, seq_len, self.num_attn_heads, self.head_dim).transpose(1, 2).contiguous()
def forward(
self,
hidden_states,
key_value_states: Optional[Tensor] = None,
attention_mask: Optional[Tensor] = None,
layer_head_mask: Optional[Tensor] = None,
past_key_value: Optional[Tuple[Tensor]] = None,
output_attentions: bool = False,
) -> Tuple[Tensor, Optional[Tensor]]:
batch_size, tgt_len, hidden_size = hidden_states.size()
# if key_value_states are provided this layer is used as a cross-attention layer
# for the decoder
is_cross_attention = key_value_states is not None
assert list(hidden_states.size()) == [
batch_size,
tgt_len,
hidden_size,
], f"Size of hidden states should be {batch_size, tgt_len, hidden_size}, but is {hidden_states.size()}"
# previous time steps are cached - no need to recompute key and value if they are static
query_states = self.query_proj(hidden_states) / (self.head_dim**0.5)
if is_cross_attention and past_key_value is not None:
# reuse k,v, cross_attentions
key_states = past_key_value[0]
value_states = past_key_value[1]
elif is_cross_attention:
# cross_attentions
key_states = self._shape(self.key_proj(key_value_states), -1, batch_size)
value_states = self._shape(self.value_proj(key_value_states), -1, batch_size)
else:
# self_attention
key_states = self._shape(self.key_proj(hidden_states), -1, batch_size)
value_states = self._shape(self.value_proj(hidden_states), -1, batch_size)
if is_cross_attention:
# if cross_attention save Tuple(torch.Tensor, torch.Tensor) of all cross attention key/value_states.
# Further calls to cross_attention layer can then reuse all cross-attention
# key/value_states (first "if" case)
# if encoder bi-directional self-attention `past_key_value` is always `None`
past_key_value = (key_states, value_states)
# project states into the correct shape
proj_shape = (batch_size, self.num_attn_heads, -1, self.head_dim)
query_states = self._shape(query_states, tgt_len, batch_size).view(*proj_shape)
key_states = key_states.view(*proj_shape)
value_states = value_states.view(*proj_shape)
src_len = key_states.size(2)
attn_weights = torch.einsum("bsij,bsjk->bsik", query_states, key_states.transpose(2, 3))
expected_shape = (batch_size, self.num_attn_heads, tgt_len, src_len)
if attn_weights.size() != expected_shape:
raise ValueError(f"Attention weights should have size {expected_shape}, but is {attn_weights.size()}")
# This is part of a workaround to get around fork/join parallelism not supporting Optional types.
if attention_mask is not None and attention_mask.dim() == 0:
attention_mask = None
expected_shape = (batch_size, self.num_attn_heads, 1, src_len)
if attention_mask is not None and attention_mask.size() != expected_shape:
raise ValueError(f"Attention mask should have size {expected_shape}, but is {attention_mask.size()}")
if attention_mask is not None: # don't attend to padding symbols
attn_weights = attn_weights + attention_mask
if output_attentions:
attn_weights_reshaped = attn_weights
else:
attn_weights_reshaped = None
attn_weights = nn.functional.softmax(attn_weights, dim=-1)
if layer_head_mask is not None:
assert layer_head_mask.size() == (self.num_attn_heads,), (
f"Head mask for a single layer should be of size {(self.num_attn_heads,)}, but is"
f" {layer_head_mask.size()}"
)
attn_weights = layer_head_mask.view(1, -1, 1, 1) * attn_weights.view(
batch_size, self.num_attn_heads, tgt_len, src_len
)
# apply head_mask also on attn_weights_reshaped which is used for n-gram attention inside the model
attn_weights_reshaped = layer_head_mask.view(1, -1, 1, 1) * attn_weights_reshaped
attn_probs = nn.functional.dropout(
attn_weights,
p=self.attention_dropout,
training=self.training,
)
attn_output = torch.einsum("bsij,bsjk->bsik", attn_probs, value_states)
expected_shape = (batch_size, self.num_attn_heads, tgt_len, self.head_dim)
if attn_output.size() != expected_shape:
raise ValueError(f"`attn_output` should have shape {expected_shape}, but is of shape {attn_output.size()}")
attn_output = attn_output.transpose(1, 2).reshape(batch_size, tgt_len, hidden_size)
attn_output = self.out_proj(attn_output)
attn_output = nn.functional.dropout(attn_output, p=self.dropout, training=self.training)
return attn_output, attn_weights_reshaped, past_key_value
class ProphetNetFeedForward(nn.Module):
"""
This is the residual two feed-forward layer block based on the original Transformer implementation.
"""
def __init__(self, config: ProphetNetConfig, ffn_dim: int):
super().__init__()
self.activation_fn = ACT2FN[config.activation_function]
self.intermediate = nn.Linear(config.hidden_size, ffn_dim)
self.output = nn.Linear(ffn_dim, config.hidden_size)
self.activation_dropout = config.activation_dropout
self.dropout = config.dropout
def forward(self, hidden_states):
hidden_states = self.intermediate(hidden_states)
hidden_states = self.activation_fn(hidden_states)
hidden_states = nn.functional.dropout(hidden_states, p=self.activation_dropout, training=self.training)
hidden_states = self.output(hidden_states)
hidden_states = nn.functional.dropout(hidden_states, p=self.dropout, training=self.training)
return hidden_states
class ProphetNetNgramSelfAttention(nn.Module):
def __init__(self, config: ProphetNetConfig):
super().__init__()
self.hidden_size = config.hidden_size
self.num_buckets = config.num_buckets
self.relative_max_distance = config.relative_max_distance
self.num_attn_heads = config.num_decoder_attention_heads
self.dropout = config.dropout
self.attention_dropout = config.attention_dropout
self.head_dim = config.hidden_size // self.num_attn_heads
self.ngram = config.ngram
assert (
self.head_dim * self.num_attn_heads == config.hidden_size
), "config.hidden_size must be divisible by num_attn_heads"
# key, value, query projection
self.key_proj = nn.Linear(config.hidden_size, config.hidden_size)
self.value_proj = nn.Linear(config.hidden_size, config.hidden_size)
self.query_proj = nn.Linear(config.hidden_size, config.hidden_size)
# out projection
self.out_proj = nn.Linear(config.hidden_size, config.hidden_size)
# rel position embeddings
self.relative_pos_embeddings = nn.Linear(config.hidden_size, self.num_buckets * self.num_attn_heads)
# for onnx runtime
self.onnx_trace = False
def _shape(self, tensor, seq_len, batch_size):
return tensor.view(batch_size, seq_len, self.num_attn_heads, self.head_dim).transpose(1, 2).contiguous()
def prepare_for_onnx_export_(self):
self.onnx_trace = True
def forward(
self,
hidden_states,
past_key_value: Optional[Tuple[Tensor]] = None,
attention_mask=None,
layer_head_mask=None,
extended_predict_attention_mask=None,
main_relative_position_buckets=None,
predict_relative_position_buckets=None,
position_ids=None,
):
batch_size, ngram_sequence_length, hidden_size = hidden_states.size()
assert list(hidden_states.size()) == [batch_size, ngram_sequence_length, hidden_size], (
f"`hidden_states` should be of shape {batch_size, ngram_sequence_length, hidden_size}, but is of shape"
f" {hidden_states.shape}"
)
# project
query_states = self.query_proj(hidden_states)
key_states = self.key_proj(hidden_states)
value_states = self.value_proj(hidden_states)
# normalize
query_states = query_states / (self.head_dim**0.5)
# reshape
query_states = self._shape(query_states, ngram_sequence_length, batch_size)
key_states = self._shape(key_states, -1, batch_size)
value_states = self._shape(value_states, -1, batch_size)
proj_shape = (batch_size, self.num_attn_heads, -1, self.head_dim)
query_states = query_states.view(*proj_shape)
key_states = key_states.view(*proj_shape)
value_states = value_states.view(*proj_shape)
# chunk into main stream and predict stream
hidden_states_list = hidden_states.chunk(1 + self.ngram, dim=1)
query_states_list = query_states.chunk(1 + self.ngram, dim=2)
key_states_list = key_states.chunk(1 + self.ngram, dim=2)
value_states_list = value_states.chunk(1 + self.ngram, dim=2)
main_hidden_states, hidden_states_predict_list = hidden_states_list[0], hidden_states_list[1:]
main_query_states, predict_query_states_list = query_states_list[0], query_states_list[1:]
main_key_states, predict_key_states_list = key_states_list[0], key_states_list[1:]
main_value_states, predict_value_states_list = value_states_list[0], value_states_list[1:]
# saved states are stored with shape (batch_size, num_attn_heads, seq_len, head_dim)
if past_key_value is not None:
prev_main_key_states = past_key_value[0]
main_key_states = torch.cat((prev_main_key_states, main_key_states), dim=2)
prev_main_value_states = past_key_value[1]
main_value_states = torch.cat((prev_main_value_states, main_value_states), dim=2)
# Update cache
past_key_value = (main_key_states, main_value_states)
# get seq_length of main stream only
sequence_length = ngram_sequence_length // (1 + self.ngram)
# MAIN-STREAM
# main attn weights
# [batch_size, number_heads, sequence_length, head_dimesion]
# x [batch_size, number_heads, head_dimesion, sequence_length]
# -> [batch_size, number_heads, sequence_length, sequence_length]
main_attn_weights = torch.einsum("bntc,bncs->bnts", main_query_states, main_key_states.transpose(2, 3))
# retrieve relative position embeddings for each layer -> see paper for more details
main_relative_pos_embeddings = self.get_main_relative_pos_embeddings(
main_hidden_states, main_attn_weights, position_ids, main_relative_position_buckets
)
main_attn_weights = main_attn_weights + main_relative_pos_embeddings
if attention_mask is not None:
main_attn_weights = main_attn_weights + attention_mask
main_attn_probs = softmax(
main_attn_weights,
dim=-1,
onnx_trace=self.onnx_trace,
).type_as(main_attn_weights)
if layer_head_mask is not None:
assert layer_head_mask.size() == (self.num_attn_heads,), (
f"Head mask for a single layer should be of size {(self.num_attn_heads,)}, but is"
f" {layer_head_mask.size()}"
)
main_attn_probs = layer_head_mask.view(1, -1, 1, 1) * main_attn_probs.view(
batch_size, self.num_attn_heads, -1, sequence_length
)
main_attn_probs = nn.functional.dropout(main_attn_probs, p=self.attention_dropout, training=self.training)
# project to attn_output
# [batch_size, number_heads, sequence_length, sequence_length]
# x [batch_size, number_heads, sequence_length, head_dimesion]
# -> [batch_size, number_heads, sequence_length, head_dimesion]
main_attn_output = torch.einsum("bntc,bncs->bnts", main_attn_probs, main_value_states)
# reshape so that num_heads dim is merged into last `head_dim` axis
main_attn_output = main_attn_output.transpose(1, 2).reshape(batch_size, 1, sequence_length, hidden_size)
main_attn_output = self.out_proj(main_attn_output)
# PREDICT-STREAM
# [batch_size, ngram, number_heads, sequence_length, head_dimesion]
predict_query_states = torch.stack(predict_query_states_list, 1).view(
batch_size, self.ngram, self.num_attn_heads, sequence_length, self.head_dim
)
# [batch_size, ngram, number_heads, 2*sequence_length, head_dimesion]
predict_key_states = torch.stack([torch.cat([main_key_states, key], 2) for key in predict_key_states_list], 1)
# [batch_size, sequence_length, ngram, hidden_size]
predict_hidden_states = torch.stack(hidden_states_predict_list, dim=2)
# [batch_size, number_heads, ngram, 2*sequence_length, head_dimesion]
predict_value_states = torch.cat(
[torch.cat([main_value_states, v_p], 2).unsqueeze(2) for v_p in predict_value_states_list], 2
)
# [batch_size, ngram, number_heads, sequence_length, head_dimesion]
# x [batch_size, ngram, number_heads, 2*sequence_length, head_dimesion]
# -> [batch_size, ngram, number_heads, sequence_length, 2*sequence_length]
predict_attn_weights = torch.einsum("bnhtc,bnhsc->bnhts", (predict_query_states, predict_key_states))
# retrieve relative position embeddings for each layer -> see paper for more details
# [batch_size, ngram, number_heads, sequence_length, predict_relative_pos_embeddings]
predict_relative_pos_embeddings = self.get_predict_relative_pos_embeddings(
predict_hidden_states, predict_attn_weights, position_ids, predict_relative_position_buckets
)
# [batch_size, ngram, number_heads, sequence_length, 2*sequence_length]
predict_attn_weights = predict_attn_weights + predict_relative_pos_embeddings
if extended_predict_attention_mask is not None:
# Permuting Predict attention mask to [batch_size, ngram, number_heads, sequence_length, 2*sequence_length]
extended_predict_attention_mask = extended_predict_attention_mask.permute(0, 2, 1, 3, 4)
extended_predict_attention_mask = extended_predict_attention_mask.to(predict_attn_weights.dtype)
predict_attn_weights = predict_attn_weights + extended_predict_attention_mask
predict_attn_probs = softmax(
predict_attn_weights,
dim=-1,
onnx_trace=self.onnx_trace,
).type_as(predict_attn_weights)
if layer_head_mask is not None:
assert layer_head_mask.size() == (self.num_attn_heads,), (
f"Head mask for a single layer should be of size {(self.num_attn_heads,)}, but is"
f" {layer_head_mask.size()}"
)
predict_attn_probs = layer_head_mask.view(1, 1, -1, 1, 1) * predict_attn_probs
predict_attn_probs = nn.functional.dropout(
predict_attn_probs, p=self.attention_dropout, training=self.training
)
# project to attention output
# [batch_size, ngram, number_heads, sequence_length, 2*sequence_length]
# x [batch_size, ngram, number_heads, 2*sequence_length, head_dimesion]
# -> [batch_size, ngram, number_heads, sequence_length, head_dimesion]
predict_attn_output = torch.einsum(
"bnhts,bnhsc->bnhtc", (predict_attn_probs, predict_value_states.transpose(1, 2))
)
# reshape so that num_heads dim is merged into last `head_dim` axis
# [batch_size, ngram, number_heads, sequence_length, head_dimesion] -> [batch_size, ngram, sequence_length, hidden_size]
predict_attn_output = predict_attn_output.transpose(2, 3)
predict_attn_output = predict_attn_output.reshape(batch_size, self.ngram, sequence_length, hidden_size)
predict_attn_output = self.out_proj(predict_attn_output)
# concat to single attn output
# [batch_size, (1+ngram)*sequence_length, hidden_size]
attn_output = torch.cat([main_attn_output, predict_attn_output], 1).view(batch_size, -1, hidden_size)
# reshape into better form for `config.output_attentions`
main_attn_probs = main_attn_probs.view(batch_size, self.num_attn_heads, sequence_length, -1)
attn_output = nn.functional.dropout(attn_output, p=self.dropout, training=self.training)
return attn_output, main_attn_probs, predict_attn_probs, past_key_value
def get_main_relative_pos_embeddings(
self, hidden_states, attn_weights, position_ids, main_relative_position_buckets
):
# input hidden_states [batch_size, sequence_length, hidden_size]
# input attn_weights [batch_size, num_heads, sequence_length, sequence_length]
# input position_ids [batch_size, sequence_length] or [1,1]
batch_size, num_attn_heads, tgt_len, src_len = attn_weights.shape
attn_weights = attn_weights.view(batch_size, num_attn_heads, tgt_len, src_len)
if main_relative_position_buckets is None:
batch_size, sequence_length = hidden_states.shape[:2]
relative_positions = (
torch.arange(1, attn_weights.shape[-1] + 1)
.unsqueeze(0)
.unsqueeze(0)
.repeat(batch_size, sequence_length, 1)
.to(position_ids.device)
)
# [batch_size, sequence_length, sequence_length+1]
relative_positions = relative_positions - position_ids.unsqueeze(0).repeat(batch_size, sequence_length, 1)
main_relative_position_buckets = compute_relative_buckets(
self.num_buckets, self.relative_max_distance, relative_positions, False
)
# [batch_size, sequence_length, num_buckets * num_heads]
rel_pos_embeddings = self.relative_pos_embeddings(hidden_states)
rel_pos_embeddings = rel_pos_embeddings.view(
rel_pos_embeddings.shape[:2] + (self.num_buckets, self.num_attn_heads)
)
rel_pos_embeddings = rel_pos_embeddings.permute(0, 3, 1, 2)
# [batch_size, num_heads, sequence_length, num_buckets]
rel_pos_embeddings = rel_pos_embeddings.reshape(attn_weights.shape[:3] + (-1,))
main_relative_position_buckets = main_relative_position_buckets.repeat(1, self.num_attn_heads, 1)
# [batch_size * num_heads * sequence_length, sequence_length]
main_relative_position_buckets = main_relative_position_buckets.view(
-1, main_relative_position_buckets.shape[-1]
)
main_relative_position_buckets = main_relative_position_buckets.long()
# [batch_size * num_heads * sequence_length, sequence_length]
rel_pos_embeddings = rel_pos_embeddings.reshape(-1, rel_pos_embeddings.size(-1))
main_relative_pos_embeddings = torch.gather(rel_pos_embeddings, dim=1, index=main_relative_position_buckets)
main_relative_pos_embeddings = main_relative_pos_embeddings.view(batch_size, num_attn_heads, tgt_len, -1)
return main_relative_pos_embeddings
def get_predict_relative_pos_embeddings(
self, hidden_states, attn_weights, position_ids, predict_relative_position_buckets
):
# input hidden_states [batch_size, sequence_length, ngram, hidden_size]
# input attn_weights [batch_size, ngram, num_heads, sequence_length, 2*sequence_length]
# input position_ids [batch_size, sequence_length] or [1,1]
# input predict_relative_position_buckets [batch_size, sequence_length, 2*sequence_length] or None
batch_size, sequence_length = hidden_states.shape[0:2]
if predict_relative_position_buckets is None:
key_sequence_length = attn_weights.shape[-1]
assert (
position_ids[0][0] == key_sequence_length - 1
), "`position_ids` are incorrect. They should be of the format 1 2 3 4 5 ... (key_sequence_length - 1)"
relative_positions = (
torch.arange(0, key_sequence_length)
.unsqueeze(0)
.unsqueeze(0)
.repeat(batch_size, sequence_length, 1)
.to(position_ids.device)
)
relative_positions = relative_positions - position_ids.unsqueeze(0).repeat(batch_size, sequence_length, 1)
predict_relative_position_buckets = compute_relative_buckets(
self.num_buckets, self.relative_max_distance, relative_positions, False
)
# [batch_size, ngram, sequence_length, hidden_size]
hidden_states = hidden_states.transpose(1, 2)
rel_pos_embeddings = self.relative_pos_embeddings(hidden_states)
# [batch_size, ngram, sequence_length, num_buckets, num_heads]
rel_pos_embeddings = rel_pos_embeddings.view(
hidden_states.shape[:-1] + (self.num_buckets, self.num_attn_heads)
)
rel_pos_embeddings = rel_pos_embeddings.permute(0, 2, 1, 4, 3)
# [batch_size * ngram * sequence_length * num_heads, num_buckets]
rel_pos_embeddings = rel_pos_embeddings.reshape(-1, self.num_buckets)
# [ngram, batch_size, num_heads * sequence_length, -1]
predict_relative_position_buckets = predict_relative_position_buckets.unsqueeze(0)
predict_relative_position_buckets = predict_relative_position_buckets.repeat(
self.ngram, 1, self.num_attn_heads, 1
)
# [ngram * batch_size * num_heads * sequence_length, -1]
predict_relative_position_buckets = predict_relative_position_buckets.view(
-1, predict_relative_position_buckets.size(-1)
).long()
predict_relative_pos_embeddings = torch.gather(
rel_pos_embeddings, dim=1, index=predict_relative_position_buckets
)
# [batch_size, gram, num_heads, sequence_length, -1]
predict_relative_pos_embeddings = predict_relative_pos_embeddings.view(
batch_size, self.ngram, self.num_attn_heads, sequence_length, -1
)
return predict_relative_pos_embeddings
class ProphetNetEncoderLayer(nn.Module):
"""
Encoder block for Prophetnet
"""
def __init__(self, config: ProphetNetConfig):
super().__init__()
# 1st residual block
self.self_attn = ProphetNetAttention(config, config.num_encoder_attention_heads)
self.self_attn_layer_norm = LayerNorm(config.hidden_size)
# 2nd residual block
self.feed_forward = ProphetNetFeedForward(config, config.encoder_ffn_dim)
self.feed_forward_layer_norm = LayerNorm(config.hidden_size)
def forward(
self,
hidden_states,
attention_mask,
layer_head_mask,
output_attentions: bool = False,
):
# 1st residual block
attention_output, attn_weights, _ = self.self_attn(
hidden_states=hidden_states,
attention_mask=attention_mask,
layer_head_mask=layer_head_mask,
output_attentions=output_attentions,
)
hidden_states = self.self_attn_layer_norm(attention_output + hidden_states)
# 2nd residual block
feed_forward_output = self.feed_forward(hidden_states)
hidden_states = self.feed_forward_layer_norm(feed_forward_output + hidden_states)
outputs = (hidden_states,)
if output_attentions:
outputs += (attn_weights,)
return outputs
class ProphetNetDecoderLayer(nn.Module):
"""
Decoder block for Prophetnet
"""
def __init__(self, config: ProphetNetConfig):
super().__init__()
# 1st residual block
self.self_attn = ProphetNetNgramSelfAttention(config)
self.self_attn_layer_norm = LayerNorm(config.hidden_size)
# 2nd residual block
if config.add_cross_attention:
self.cross_attn = ProphetNetAttention(config, config.num_decoder_attention_heads)
self.cross_attn_layer_norm = LayerNorm(config.hidden_size)
# 3rd residual block
self.feed_forward = ProphetNetFeedForward(config, config.decoder_ffn_dim)
self.feed_forward_layer_norm = LayerNorm(config.hidden_size)
def forward(
self,
hidden_states,
attention_mask=None,
encoder_hidden_states=None,
encoder_attn_mask=None,
layer_head_mask=None,
cross_attn_layer_head_mask=None,
extended_predict_attention_mask=None,
main_relative_position_buckets=None,
predict_relative_position_buckets=None,
position_ids=None,
past_key_value=None,
use_cache: bool = True,
output_attentions: bool = False,
):
# 1st residual block
# decoder uni-directional self-attention cached key/values tuple is at positions 1,2
self_attn_past_key_value = past_key_value[:2] if past_key_value is not None else None
ngram_attention_output, self_attn_weights, self_attn_weights_ngram, present_key_value = self.self_attn(
hidden_states=hidden_states,
past_key_value=self_attn_past_key_value,
attention_mask=attention_mask,
layer_head_mask=layer_head_mask,
extended_predict_attention_mask=extended_predict_attention_mask,
main_relative_position_buckets=main_relative_position_buckets,
predict_relative_position_buckets=predict_relative_position_buckets,
position_ids=position_ids,
)
hidden_states = self.self_attn_layer_norm(hidden_states + ngram_attention_output)
# cross_attn cached key/values tuple is at positions 3,4 of present_key_value tuple
cross_attn_past_key_value = past_key_value[-2:] if past_key_value is not None else None
cross_attn_weights = None
if encoder_hidden_states is not None:
# 2nd residual block
attention_output, cross_attn_weights, cross_attn_present_key_value = self.cross_attn(
hidden_states=hidden_states,
key_value_states=encoder_hidden_states,
attention_mask=encoder_attn_mask,
layer_head_mask=cross_attn_layer_head_mask,
past_key_value=cross_attn_past_key_value,
output_attentions=output_attentions,
)
hidden_states = self.cross_attn_layer_norm(attention_output + hidden_states)
# add cross-attn to positions 3,4 of present_key_value tuple
present_key_value = present_key_value + cross_attn_present_key_value
# 3rd residual block
feed_forward_output = self.feed_forward(hidden_states)
hidden_states = self.feed_forward_layer_norm(feed_forward_output + hidden_states)
outputs = (hidden_states,)
if output_attentions:
outputs += (self_attn_weights, self_attn_weights_ngram, cross_attn_weights)
if use_cache:
outputs += (present_key_value,)
return outputs
@add_start_docstrings(
"The standalone encoder part of the ProphetNetModel.",
PROPHETNET_START_DOCSTRING,
)
class ProphetNetEncoder(ProphetNetPreTrainedModel):
r"""
word_embeddings (`torch.nn.Embeddings` of shape `(config.vocab_size, config.hidden_size)`, *optional*):
The word embedding parameters. This can be used to initialize [`ProphetNetEncoder`] with pre-defined word
embeddings instead of randomly initialized word embeddings.
"""
def __init__(self, config: ProphetNetConfig, word_embeddings: nn.Embedding = None):
super().__init__(config)
self.word_embeddings = (
word_embeddings
if word_embeddings is not None
else nn.Embedding(config.vocab_size, config.hidden_size, padding_idx=config.pad_token_id)
)
self.position_embeddings = ProphetNetPositionalEmbeddings(config)
self.embeddings_layer_norm = LayerNorm(config.hidden_size)
self.layers = nn.ModuleList([ProphetNetEncoderLayer(config) for _ in range(config.num_encoder_layers)])
self.gradient_checkpointing = False
# Initialize weights and apply final processing
self.post_init()
def get_input_embeddings(self):
return self.word_embeddings
def set_input_embeddings(self, value):
self.word_embeddings = value
@add_start_docstrings_to_model_forward(PROPHETNET_STANDALONE_INPUTS_DOCSTRING)
@replace_return_docstrings(output_type=BaseModelOutput, config_class=_CONFIG_FOR_DOC)
def forward(
self,
input_ids: Optional[torch.Tensor] = None,
attention_mask: Optional[torch.Tensor] = None,
head_mask: Optional[torch.Tensor] = None,
inputs_embeds: Optional[torch.Tensor] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[Tuple, BaseModelOutput]:
r"""
Returns:
Example:
```python
>>> from transformers import AutoTokenizer, ProphetNetEncoder
>>> import torch
>>> tokenizer = AutoTokenizer.from_pretrained("microsoft/prophetnet-large-uncased")
>>> model = ProphetNetEncoder.from_pretrained("patrickvonplaten/prophetnet-large-uncased-standalone")
>>> inputs = tokenizer("Hello, my dog is cute", return_tensors="pt")
>>> outputs = model(**inputs)
>>> last_hidden_states = outputs.last_hidden_state
```"""
output_attentions = output_attentions if output_attentions is not None else self.config.output_attentions
output_hidden_states = (
output_hidden_states if output_hidden_states is not None else self.config.output_hidden_states
)
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
if input_ids is None and inputs_embeds is None:
raise ValueError("Either input_ids or inputs_embeds has to be passed.")
elif input_ids is not None and inputs_embeds is not None:
raise ValueError("Make sure to only pass input_ids or inputs_embeds.")
elif input_ids is not None and inputs_embeds is None:
inputs_embeds = self.word_embeddings(input_ids)
# prepare attention mask
if attention_mask is not None:
extended_attention_mask = (
1.0 - attention_mask[:, None, None, :].repeat(1, self.config.num_encoder_attention_heads, 1, 1)
) * torch.finfo(self.dtype).min
extended_attention_mask = extended_attention_mask.to(inputs_embeds.dtype)
else:
extended_attention_mask = None
position_embeddings, position_ids = self.position_embeddings(inputs_embeds.shape[:2], inputs_embeds.device)
hidden_states = inputs_embeds + position_embeddings
hidden_states = self.embeddings_layer_norm(hidden_states)
hidden_states = nn.functional.dropout(hidden_states, p=self.config.dropout, training=self.training)
encoder_hidden_states = () if output_hidden_states else None
all_attentions = () if output_attentions else None
# check if head_mask has a correct number of layers specified if desired
if head_mask is not None:
assert head_mask.size()[0] == (
len(self.layers)
), f"The head_mask should be specified for {len(self.layers)} layers, but it is for {head_mask.size()[0]}."
for idx, encoder_layer in enumerate(self.layers):
if output_hidden_states:
encoder_hidden_states = encoder_hidden_states + (hidden_states,)
if self.gradient_checkpointing and self.training:
def create_custom_forward(module):
def custom_forward(*inputs):
return module(*inputs, output_attentions)
return custom_forward
layer_outputs = torch.utils.checkpoint.checkpoint(
create_custom_forward(encoder_layer),
hidden_states,
extended_attention_mask,
(head_mask[idx] if head_mask is not None else None),
)
else:
layer_outputs = encoder_layer(
hidden_states,
attention_mask=extended_attention_mask,
layer_head_mask=(head_mask[idx] if head_mask is not None else None),
output_attentions=output_attentions,
)
hidden_states = layer_outputs[0]
if output_attentions:
all_attentions = all_attentions + (layer_outputs[1],)
if output_hidden_states:
encoder_hidden_states = encoder_hidden_states + (hidden_states,)
if not return_dict:
return tuple(v for v in [hidden_states, encoder_hidden_states, all_attentions] if v is not None)
return BaseModelOutput(
last_hidden_state=hidden_states, hidden_states=encoder_hidden_states, attentions=all_attentions
)
@add_start_docstrings(
"The standalone decoder part of the ProphetNetModel.",
PROPHETNET_START_DOCSTRING,
)
class ProphetNetDecoder(ProphetNetPreTrainedModel):
r"""
word_embeddings (`torch.nn.Embeddings` of shape `(config.vocab_size, config.hidden_size)`, *optional*):
The word embedding parameters. This can be used to initialize [`ProphetNetEncoder`] with pre-defined word
embeddings instead of randomly initialized word embeddings.
"""
def __init__(self, config: ProphetNetConfig, word_embeddings: Optional[nn.Embedding] = None):
super().__init__(config)
self.ngram = config.ngram
self.num_buckets = config.num_buckets
self.relative_max_distance = config.relative_max_distance
self.dropout = config.dropout
self.max_target_positions = config.max_position_embeddings
self.word_embeddings = (
word_embeddings
if word_embeddings is not None
else nn.Embedding(config.vocab_size, config.hidden_size, padding_idx=config.pad_token_id)
)
self.position_embeddings = ProphetNetPositionalEmbeddings(config)
self.ngram_embeddings = nn.Embedding(self.ngram, config.hidden_size, None)
self.layers = nn.ModuleList([ProphetNetDecoderLayer(config) for _ in range(config.num_decoder_layers)])
self.embeddings_layer_norm = LayerNorm(config.hidden_size)
self.gradient_checkpointing = False
# Initialize weights and apply final processing
self.post_init()
def get_input_embeddings(self):
return self.word_embeddings
def set_input_embeddings(self, value):
self.word_embeddings = value
@add_start_docstrings_to_model_forward(PROPHETNET_STANDALONE_INPUTS_DOCSTRING)
@replace_return_docstrings(output_type=ProphetNetDecoderModelOutput, config_class=_CONFIG_FOR_DOC)
def forward(
self,
input_ids: Optional[torch.Tensor] = None,
attention_mask: Optional[torch.Tensor] = None,
encoder_hidden_states: Optional[torch.Tensor] = None,
encoder_attention_mask: Optional[torch.Tensor] = None,
head_mask: Optional[torch.Tensor] = None,
cross_attn_head_mask: Optional[torch.Tensor] = None,
past_key_values: Optional[Tuple[Tuple[torch.Tensor]]] = None,
inputs_embeds: Optional[torch.Tensor] = None,
use_cache: Optional[bool] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[Tuple, ProphetNetDecoderModelOutput]:
r"""
encoder_hidden_states (`torch.FloatTensor` of shape `(batch_size, sequence_length, hidden_size)`, *optional*):
Sequence of hidden-states at the output of the last layer of the encoder. Used in the cross-attention if
the model is configured as a decoder.
encoder_attention_mask (`torch.FloatTensor` of shape `(batch_size, sequence_length)`, *optional*):
Mask to avoid performing attention on the padding token indices of the encoder input. This mask is used in
the cross-attention if the model is configured as a decoder. Mask values selected in `[0, 1]`:
cross_attn_head_mask (`torch.Tensor` of shape `(decoder_layers, decoder_attention_heads)`, *optional*):
Mask to nullify selected heads of the cross-attention modules. Mask values selected in `[0, 1]`:
- 1 indicates the head is **not masked**,
- 0 indicates the head is **masked**.
past_key_values (`tuple(tuple(torch.FloatTensor))` of length `config.n_layers` with each tuple having 4 tensors of shape `(batch_size, num_heads, sequence_length - 1, embed_size_per_head)`):
Contains precomputed key and value hidden-states of the attention blocks. Can be used to speed up decoding.
If `past_key_values` are used, the user can optionally input only the last `decoder_input_ids` (those that
don't have their past key value states given to this model) of shape `(batch_size, 1)` instead of all
`decoder_input_ids` of shape `(batch_size, sequence_length)`.
use_cache (`bool`, *optional*):
If set to `True`, `past_key_values` key value states are returned and can be used to speed up decoding (see
`past_key_values`).
- 1 for tokens that are **not masked**,
- 0 for tokens that are **masked**.
Returns:
Example:
```python
>>> from transformers import AutoTokenizer, ProphetNetDecoder
>>> import torch
>>> tokenizer = AutoTokenizer.from_pretrained("microsoft/prophetnet-large-uncased")
>>> model = ProphetNetDecoder.from_pretrained("microsoft/prophetnet-large-uncased", add_cross_attention=False)
>>> inputs = tokenizer("Hello, my dog is cute", return_tensors="pt")
>>> outputs = model(**inputs)
>>> last_hidden_states = outputs.last_hidden_state
```"""
use_cache = use_cache if use_cache is not None else self.config.use_cache
output_attentions = output_attentions if output_attentions is not None else self.config.output_attentions
output_hidden_states = (
output_hidden_states if output_hidden_states is not None else self.config.output_hidden_states
)
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
if input_ids is None and inputs_embeds is None:
raise ValueError("Either `decoder_input_ids` or `decoder_inputs_embeds` has to be passed.")
elif input_ids is not None and inputs_embeds is not None:
raise ValueError("Make sure to only pass `decoder_input_ids` or `decoder_inputs_embeds`.")
elif input_ids is not None and inputs_embeds is None:
inputs_embeds = self.word_embeddings(input_ids)
batch_size, sequence_length = inputs_embeds.shape[:2]
main_stream_pos_embed, position_ids = self.position_embeddings(
(batch_size, sequence_length),
device=inputs_embeds.device,
past_key_values=past_key_values,
)
if past_key_values is not None:
main_relative_position_buckets, predict_relative_position_buckets = None, None
else:
(
main_relative_position_buckets,
predict_relative_position_buckets,
) = self.compute_buffered_relative_buckets(position_ids)
predicting_stream_pos_embed = self.position_embeddings._forward(position_ids + 1)
# add position embeddings
hidden_states = inputs_embeds + main_stream_pos_embed
ngram_embeddings = self.ngram_embeddings.weight
# prepare attention mask
if past_key_values is not None:
assert (
hidden_states.size(1) == 1
), "At the moment `use_cache` is only supported for `decoder_input_ids` of length 1"
ngram_hidden_states = [
(ngram_embeddings[ngram - 1] + predicting_stream_pos_embed).repeat(batch_size, 1, 1)
for ngram in range(self.ngram)
]
extended_attention_mask = None
extended_predict_attention_mask = None
else:
ngram_hidden_states = [
(ngram_embeddings[ngram - 1] + predicting_stream_pos_embed) for ngram in range(self.ngram)
]
extended_attention_mask = self.prepare_attention_mask(hidden_states, attention_mask)
extended_predict_attention_mask = self.prepare_predict_attention_mask(hidden_states, attention_mask)
# prepare encoder attention mask
if encoder_attention_mask is not None:
extended_encoder_attention_mask = (
1.0 - encoder_attention_mask[:, None, None, :].repeat(1, self.config.num_decoder_attention_heads, 1, 1)
) * torch.finfo(self.dtype).min
extended_encoder_attention_mask = extended_encoder_attention_mask.to(inputs_embeds.dtype)
else:
extended_encoder_attention_mask = None
hidden_states = torch.cat([hidden_states] + ngram_hidden_states, 1)
if self.embeddings_layer_norm:
hidden_states = self.embeddings_layer_norm(hidden_states)
hidden_states = nn.functional.dropout(hidden_states, p=self.dropout, training=self.training)
# init attentions, hidden_states and cache with empty tuples
all_main_stream_hidden_states = () if output_hidden_states else None
all_ngram_stream_hidden_states = () if output_hidden_states and self.config.ngram > 0 else None
all_main_stream_attns = () if output_attentions else None
all_ngram_stream_attns = () if output_attentions else None
all_cross_attns = () if output_attentions and self.config.add_cross_attention else None
if self.gradient_checkpointing and self.training:
if use_cache:
logger.warning_once(
"`use_cache=True` is incompatible with gradient checkpointing. Setting `use_cache=False`..."
)
use_cache = False
present_key_values = () if use_cache else None
# check if head_mask/cross_attn_head_mask has a correct number of layers specified if desired
for attn_mask, mask_name in zip([head_mask, cross_attn_head_mask], ["head_mask", "cross_attn_head_mask"]):
if attn_mask is not None:
assert attn_mask.size()[0] == (len(self.layers)), (
f"The `{mask_name}` should be specified for {len(self.layers)} layers, but it is for"
f" {head_mask.size()[0]}."
)
for idx, decoder_layer in enumerate(self.layers):
if output_hidden_states:
# grad cannot be kept because tensor is sliced
all_main_stream_hidden_states += (hidden_states[:, :sequence_length],)
if self.config.ngram > 0:
all_ngram_stream_hidden_states += (hidden_states[:, sequence_length:],)
past_key_value = past_key_values[idx] if past_key_values is not None else None
if self.gradient_checkpointing and self.training:
def create_custom_forward(module):
def custom_forward(*inputs):
# None for past_key_value
return module(*inputs, use_cache, output_attentions)
return custom_forward
layer_outputs = torch.utils.checkpoint.checkpoint(
create_custom_forward(decoder_layer),
hidden_states,
extended_attention_mask,
encoder_hidden_states,
extended_encoder_attention_mask,
(head_mask[idx] if head_mask is not None else None),
(cross_attn_head_mask[idx] if cross_attn_head_mask is not None else None),
extended_predict_attention_mask,
main_relative_position_buckets,
predict_relative_position_buckets,
position_ids,
None,
)
else:
layer_outputs = decoder_layer(
hidden_states,
attention_mask=extended_attention_mask,
encoder_hidden_states=encoder_hidden_states,
encoder_attn_mask=extended_encoder_attention_mask,
layer_head_mask=(head_mask[idx] if head_mask is not None else None),
cross_attn_layer_head_mask=(
cross_attn_head_mask[idx] if cross_attn_head_mask is not None else None
),
extended_predict_attention_mask=extended_predict_attention_mask,
main_relative_position_buckets=main_relative_position_buckets,
predict_relative_position_buckets=predict_relative_position_buckets,
position_ids=position_ids,
past_key_value=past_key_value,
use_cache=use_cache,
output_attentions=output_attentions,
)
hidden_states = layer_outputs[0]
if use_cache:
present_key_values += (layer_outputs[4 if output_attentions else 1],)
if output_attentions:
all_main_stream_attns += (layer_outputs[1],)
all_ngram_stream_attns += (layer_outputs[2],)
if self.config.add_cross_attention:
all_cross_attns += (layer_outputs[3],)
if output_hidden_states:
all_main_stream_hidden_states += (hidden_states[:, :sequence_length],)
if self.config.ngram > 0:
all_ngram_stream_hidden_states += (hidden_states[:, sequence_length:],)
# split last_hidden_state for return
last_hidden_state = hidden_states[:, :sequence_length]
last_hidden_state_ngram = hidden_states[:, sequence_length:] if self.config.ngram > 0 else None
if not return_dict:
return tuple(
v
for v in [
last_hidden_state,
last_hidden_state_ngram,
present_key_values,
all_main_stream_hidden_states,
all_ngram_stream_hidden_states,
all_main_stream_attns,
all_ngram_stream_attns,
all_cross_attns,
]
if v is not None
)
return ProphetNetDecoderModelOutput(
last_hidden_state=last_hidden_state,
last_hidden_state_ngram=last_hidden_state_ngram,
past_key_values=present_key_values,
hidden_states=all_main_stream_hidden_states,
hidden_states_ngram=all_ngram_stream_hidden_states,
attentions=all_main_stream_attns,
ngram_attentions=all_ngram_stream_attns,
cross_attentions=all_cross_attns,
)
def compute_buffered_relative_buckets(self, position_ids):
batch_size, sequence_length = position_ids.shape
position_ids = torch.arange(1, self.max_target_positions).to(position_ids.device).repeat(1, 1)
main_relative_buckets, predict_relative_buckets = compute_all_stream_relative_buckets(
self.num_buckets, self.relative_max_distance, position_ids
)
# buffer relative buckets
main_relative_buckets = main_relative_buckets[:, :sequence_length, :sequence_length].repeat(batch_size, 1, 1)
predict_relative_buckets = torch.cat(
[
predict_relative_buckets[:, :sequence_length, :sequence_length],
predict_relative_buckets[
:, :sequence_length, self.max_target_positions : self.max_target_positions + sequence_length
],
],
2,
).repeat(batch_size, 1, 1)
return main_relative_buckets, predict_relative_buckets
def prepare_attention_mask(self, hidden_states, attention_mask):
batch_size, seq_length = hidden_states.shape[:2]
# get causal mask
causal_mask = torch.full(
(seq_length, seq_length),
torch.finfo(hidden_states.dtype).min,
dtype=hidden_states.dtype,
device=hidden_states.device,
)
causal_mask = torch.triu(causal_mask, 1)
extended_causal_mask = causal_mask[:seq_length, :seq_length][None, None, :, :].expand(
(batch_size, self.config.num_decoder_attention_heads) + causal_mask.shape
)
# add usual attention mask
if attention_mask is not None:
extended_attention_mask = (1.0 - attention_mask[:, None, None, :]) * torch.finfo(self.dtype).min
extended_attention_mask = extended_causal_mask + extended_attention_mask
else:
extended_attention_mask = extended_causal_mask
return extended_attention_mask.to(hidden_states.dtype)
def prepare_predict_attention_mask(self, hidden_states, attention_mask):
batch_size, seq_length = hidden_states.shape[:2]
# get causal mask
predict_causal_mask = ngram_attention_bias(
self.max_target_positions, self.ngram, hidden_states.device, hidden_states.dtype
)
predict_causal_mask = torch.cat(
[
predict_causal_mask[:, :seq_length, :seq_length],
predict_causal_mask[
:, :seq_length, self.max_target_positions : self.max_target_positions + seq_length
],
],
dim=-1,
)
extended_predict_causal_mask = predict_causal_mask[None, None, :, :, :].expand(
(batch_size, self.config.num_decoder_attention_heads) + predict_causal_mask.shape
)
# add usual attention mask
if attention_mask is not None:
extended_attention_mask = (1.0 - attention_mask[:, None, None, None, :]) * torch.finfo(self.dtype).min
extended_attention_mask = extended_attention_mask.expand(
(batch_size, self.config.num_decoder_attention_heads, self.ngram, seq_length, seq_length)
)
# predicted stream attention_mask should always be 0
extended_attention_mask = torch.cat(
[extended_attention_mask, torch.zeros_like(extended_attention_mask)], dim=-1
)
extended_predict_attention_mask = extended_predict_causal_mask + extended_attention_mask
else:
extended_predict_attention_mask = extended_predict_causal_mask
return extended_predict_attention_mask.to(hidden_states.dtype)
@add_start_docstrings(
"The bare ProphetNet Model outputting raw hidden-states without any specific head on top.",
PROPHETNET_START_DOCSTRING,
)
class ProphetNetModel(ProphetNetPreTrainedModel):
_tied_weights_keys = ["encoder.word_embeddings.weight", "decoder.word_embeddings.weight"]
def __init__(self, config: ProphetNetConfig):
super().__init__(config)
self.word_embeddings = nn.Embedding(config.vocab_size, config.hidden_size, padding_idx=config.pad_token_id)
encoder_config = copy.deepcopy(config)
encoder_config.is_encoder_decoder = False
encoder_config.use_cache = False
self.encoder = ProphetNetEncoder(encoder_config, self.word_embeddings)
decoder_config = copy.deepcopy(config)
decoder_config.is_decoder = True
decoder_config.is_encoder_decoder = False
self.decoder = ProphetNetDecoder(decoder_config, self.word_embeddings)
# Initialize weights and apply final processing
self.post_init()
def get_input_embeddings(self):
return self.word_embeddings
def set_input_embeddings(self, value):
self.word_embeddings = value
self.encoder.word_embeddings = self.word_embeddings
self.decoder.word_embeddings = self.word_embeddings
def get_encoder(self):
return self.encoder
def get_decoder(self):
return self.decoder
@add_start_docstrings_to_model_forward(PROPHETNET_INPUTS_DOCSTRING)
@replace_return_docstrings(output_type=ProphetNetSeq2SeqModelOutput, config_class=_CONFIG_FOR_DOC)
def forward(
self,
input_ids: Optional[torch.Tensor] = None,
attention_mask: Optional[torch.Tensor] = None,
decoder_input_ids: Optional[torch.Tensor] = None,
decoder_attention_mask: Optional[torch.BoolTensor] = None,
head_mask: Optional[torch.Tensor] = None,
decoder_head_mask: Optional[torch.Tensor] = None,
cross_attn_head_mask: Optional[torch.Tensor] = None,
encoder_outputs: Optional[Tuple] = None,
past_key_values: Optional[Tuple[Tuple[torch.Tensor]]] = None,
inputs_embeds: Optional[torch.Tensor] = None,
decoder_inputs_embeds: Optional[torch.Tensor] = None,
use_cache: Optional[bool] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[Tuple, ProphetNetSeq2SeqModelOutput]:
r"""
Returns:
Example:
```python
>>> from transformers import AutoTokenizer, ProphetNetModel
>>> tokenizer = AutoTokenizer.from_pretrained("microsoft/prophetnet-large-uncased")
>>> model = ProphetNetModel.from_pretrained("microsoft/prophetnet-large-uncased")
>>> input_ids = tokenizer(
... "Studies have been shown that owning a dog is good for you", return_tensors="pt"
... ).input_ids # Batch size 1
>>> decoder_input_ids = tokenizer("Studies show that", return_tensors="pt").input_ids # Batch size 1
>>> outputs = model(input_ids=input_ids, decoder_input_ids=decoder_input_ids)
>>> last_hidden_states = outputs.last_hidden_state # main stream hidden states
>>> last_hidden_states_ngram = outputs.last_hidden_state_ngram # predict hidden states
```"""
use_cache = use_cache if use_cache is not None else self.config.use_cache
output_attentions = output_attentions if output_attentions is not None else self.config.output_attentions
output_hidden_states = (
output_hidden_states if output_hidden_states is not None else self.config.output_hidden_states
)
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
if encoder_outputs is None:
encoder_outputs = self.encoder(
input_ids=input_ids,
attention_mask=attention_mask,
head_mask=head_mask,
inputs_embeds=inputs_embeds,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
# decoder outputs consists of (dec_features, past_key_values, dec_hidden, dec_attn)
decoder_outputs = self.decoder(
input_ids=decoder_input_ids,
attention_mask=decoder_attention_mask,
encoder_hidden_states=encoder_outputs[0],
encoder_attention_mask=attention_mask,
head_mask=decoder_head_mask,
cross_attn_head_mask=cross_attn_head_mask,
past_key_values=past_key_values,
inputs_embeds=decoder_inputs_embeds,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
use_cache=use_cache,
return_dict=return_dict,
)
if not return_dict:
return decoder_outputs + encoder_outputs
return ProphetNetSeq2SeqModelOutput(
last_hidden_state=decoder_outputs.last_hidden_state,
last_hidden_state_ngram=decoder_outputs.last_hidden_state_ngram,
past_key_values=decoder_outputs.past_key_values,
decoder_hidden_states=decoder_outputs.hidden_states,
decoder_ngram_hidden_states=decoder_outputs.hidden_states_ngram,
decoder_attentions=decoder_outputs.attentions,
decoder_ngram_attentions=decoder_outputs.ngram_attentions,
cross_attentions=decoder_outputs.cross_attentions,
encoder_last_hidden_state=encoder_outputs.last_hidden_state,
encoder_hidden_states=encoder_outputs.hidden_states,
encoder_attentions=encoder_outputs.attentions,
)
@add_start_docstrings(
"The ProphetNet Model with a language modeling head. Can be used for sequence generation tasks.",
PROPHETNET_START_DOCSTRING,
)
class ProphetNetForConditionalGeneration(ProphetNetPreTrainedModel):
_tied_weights_keys = ["encoder.word_embeddings.weight", "decoder.word_embeddings.weight", "lm_head.weight"]
def __init__(self, config: ProphetNetConfig):
super().__init__(config)
self.prophetnet = ProphetNetModel(config)
self.padding_idx = config.pad_token_id
self.disable_ngram_loss = config.disable_ngram_loss
self.lm_head = nn.Linear(config.hidden_size, config.vocab_size, bias=False)
# Initialize weights and apply final processing
self.post_init()
def get_output_embeddings(self):
return self.lm_head
def set_output_embeddings(self, new_embeddings):
self.lm_head = new_embeddings
def get_input_embeddings(self):
return self.prophetnet.word_embeddings
@add_start_docstrings_to_model_forward(PROPHETNET_INPUTS_DOCSTRING)
@replace_return_docstrings(output_type=ProphetNetSeq2SeqLMOutput, config_class=_CONFIG_FOR_DOC)
def forward(
self,
input_ids: Optional[torch.Tensor] = None,
attention_mask: Optional[torch.Tensor] = None,
decoder_input_ids: Optional[torch.Tensor] = None,
decoder_attention_mask: Optional[torch.BoolTensor] = None,
head_mask: Optional[torch.Tensor] = None,
decoder_head_mask: Optional[torch.Tensor] = None,
cross_attn_head_mask: Optional[torch.Tensor] = None,
encoder_outputs: Optional[torch.Tensor] = None,
past_key_values: Optional[Tuple[Tuple[torch.Tensor]]] = None,
inputs_embeds: Optional[torch.Tensor] = None,
decoder_inputs_embeds: Optional[torch.Tensor] = None,
labels: Optional[torch.Tensor] = None,
use_cache: Optional[bool] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[Tuple, ProphetNetSeq2SeqLMOutput]:
r"""
labels (`torch.LongTensor` of shape `(batch_size,)`, *optional*):
Labels for computing the sequence classification/regression loss. Indices should be in `[-100, 0, ...,
config.vocab_size - 1]`. All labels set to `-100` are ignored (masked), the loss is only computed for
labels in `[0, ..., config.vocab_size]`
Returns:
Example:
```python
>>> from transformers import AutoTokenizer, ProphetNetForConditionalGeneration
>>> tokenizer = AutoTokenizer.from_pretrained("microsoft/prophetnet-large-uncased")
>>> model = ProphetNetForConditionalGeneration.from_pretrained("microsoft/prophetnet-large-uncased")
>>> input_ids = tokenizer(
... "Studies have been shown that owning a dog is good for you", return_tensors="pt"
... ).input_ids # Batch size 1
>>> decoder_input_ids = tokenizer("Studies show that", return_tensors="pt").input_ids # Batch size 1
>>> outputs = model(input_ids=input_ids, decoder_input_ids=decoder_input_ids)
>>> logits_next_token = outputs.logits # logits to predict next token as usual
>>> logits_ngram_next_tokens = outputs.logits_ngram # logits to predict 2nd, 3rd, ... next tokens
```"""
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
if labels is not None and decoder_input_ids is None and decoder_inputs_embeds is None:
# get decoder inputs from shifting lm labels to the right
decoder_input_ids = self._shift_right(labels)
outputs = self.prophetnet(
input_ids=input_ids,
attention_mask=attention_mask,
decoder_input_ids=decoder_input_ids,
decoder_attention_mask=decoder_attention_mask,
head_mask=head_mask,
decoder_head_mask=decoder_head_mask,
cross_attn_head_mask=cross_attn_head_mask,
encoder_outputs=encoder_outputs,
past_key_values=past_key_values,
inputs_embeds=inputs_embeds,
decoder_inputs_embeds=decoder_inputs_embeds,
use_cache=use_cache,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
batch_size, sequence_length = (
decoder_input_ids.shape if decoder_input_ids is not None else decoder_inputs_embeds.shape[:2]
)
predicting_streams = outputs[1].view(batch_size, self.config.ngram, sequence_length, -1)
predict_logits = self.lm_head(predicting_streams)
logits = predict_logits[:, 0]
logits_ngram = predict_logits[:, 1:] if self.config.ngram > 1 else None
# To use .view in loss computation, make sure that logits is contiguous.
if not logits.is_contiguous():
logits = logits.contiguous()
loss = None
if labels is not None:
loss = self._compute_loss(predict_logits, labels)
if not return_dict:
all_logits = tuple(v for v in [logits, logits_ngram] if v is not None)
return (loss,) + all_logits + outputs[2:] if loss is not None else all_logits + outputs[2:]
else:
return ProphetNetSeq2SeqLMOutput(
loss=loss,
logits=logits,
logits_ngram=logits_ngram,
past_key_values=outputs.past_key_values,
decoder_hidden_states=outputs.decoder_hidden_states,
decoder_ngram_hidden_states=outputs.decoder_ngram_hidden_states,
decoder_attentions=outputs.decoder_attentions,
decoder_ngram_attentions=outputs.decoder_ngram_attentions,
cross_attentions=outputs.cross_attentions,
encoder_last_hidden_state=outputs.encoder_last_hidden_state,
encoder_hidden_states=outputs.encoder_hidden_states,
encoder_attentions=outputs.encoder_attentions,
)
def _compute_loss(self, logits, labels, ignore_index=-100):
expend_targets = labels.new_zeros(self.config.ngram, labels.size(0), labels.size(1)).fill_(ignore_index)
for i in range(self.config.ngram):
if i > 0 and self.disable_ngram_loss:
break
expend_targets[i, :, :] = labels
logits = logits.transpose(0, 1).contiguous()
lprobs = nn.functional.log_softmax(
logits.view(-1, logits.size(-1)),
dim=-1,
dtype=torch.float32,
)
loss = nn.functional.nll_loss(lprobs, expend_targets.view(-1), reduction="mean")
if self.config.eps > 0.0:
smooth_loss = -lprobs.sum(dim=-1, keepdim=True)
non_masked_tokens = expend_targets.ne(ignore_index).view(-1)
smooth_loss = smooth_loss[non_masked_tokens]
smooth_loss = smooth_loss.mean()
eps_i = self.config.eps / lprobs.size(-1)
loss = (1.0 - self.config.eps) * loss + eps_i * smooth_loss
return loss
def prepare_inputs_for_generation(
self,
decoder_input_ids,
past_key_values=None,
attention_mask=None,
head_mask=None,
decoder_head_mask=None,
cross_attn_head_mask=None,
use_cache=None,
encoder_outputs=None,
**kwargs,
):
assert encoder_outputs is not None, "`encoder_outputs` have to be passed for generation."
if past_key_values:
decoder_input_ids = decoder_input_ids[:, -1:]
# first step, decoder_cached_states are empty
return {
"input_ids": None, # encoder_outputs is defined. input_ids not needed
"encoder_outputs": encoder_outputs,
"past_key_values": past_key_values,
"decoder_input_ids": decoder_input_ids,
"attention_mask": attention_mask,
"head_mask": head_mask,
"decoder_head_mask": decoder_head_mask,
"cross_attn_head_mask": cross_attn_head_mask,
"use_cache": use_cache,
}
def prepare_decoder_input_ids_from_labels(self, labels: torch.Tensor):
return self._shift_right(labels)
@staticmethod
# Copied from transformers.models.bart.modeling_bart.BartForConditionalGeneration._reorder_cache
def _reorder_cache(past_key_values, beam_idx):
reordered_past = ()
for layer_past in past_key_values:
# cached cross_attention states don't have to be reordered -> they are always the same
reordered_past += (
tuple(past_state.index_select(0, beam_idx) for past_state in layer_past[:2]) + layer_past[2:],
)
return reordered_past
def get_encoder(self):
return self.prophetnet.encoder
def get_decoder(self):
return self.prophetnet.decoder
@add_start_docstrings(
"The standalone decoder part of the ProphetNetModel with a lm head on top. The model can be used for causal"
" language modeling.",
PROPHETNET_START_DOCSTRING,
)
class ProphetNetForCausalLM(ProphetNetPreTrainedModel):
_tied_weights_keys = ["lm_head.weight"]
def __init__(self, config: ProphetNetConfig):
# set config for CLM
config = copy.deepcopy(config)
config.is_decoder = True
config.is_encoder_decoder = False
super().__init__(config)
self.prophetnet = ProphetNetDecoderWrapper(config)
self.padding_idx = config.pad_token_id
self.disable_ngram_loss = config.disable_ngram_loss
self.lm_head = nn.Linear(config.hidden_size, config.vocab_size, bias=False)
# Initialize weights and apply final processing
self.post_init()
def get_input_embeddings(self):
return self.prophetnet.decoder.word_embeddings
def set_input_embeddings(self, value):
self.prophetnet.decoder.word_embeddings = value
def get_output_embeddings(self):
return self.lm_head
def set_output_embeddings(self, new_embeddings):
self.lm_head = new_embeddings
def set_decoder(self, decoder):
self.prophetnet.decoder = decoder
def get_decoder(self):
return self.prophetnet.decoder
@add_start_docstrings_to_model_forward(PROPHETNET_STANDALONE_INPUTS_DOCSTRING)
@replace_return_docstrings(output_type=ProphetNetDecoderLMOutput, config_class=_CONFIG_FOR_DOC)
def forward(
self,
input_ids: Optional[torch.Tensor] = None,
attention_mask: Optional[torch.Tensor] = None,
encoder_hidden_states: Optional[torch.Tensor] = None,
encoder_attention_mask: Optional[torch.Tensor] = None,
head_mask: Optional[torch.Tensor] = None,
cross_attn_head_mask: Optional[torch.Tensor] = None,
past_key_values: Optional[Tuple[Tuple[torch.Tensor]]] = None,
inputs_embeds: Optional[torch.Tensor] = None,
labels: Optional[torch.Tensor] = None,
use_cache: Optional[bool] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[Tuple, ProphetNetDecoderLMOutput]:
r"""
encoder_hidden_states (`torch.FloatTensor` of shape `(batch_size, sequence_length, hidden_size)`, *optional*):
Sequence of hidden-states at the output of the last layer of the encoder. Used in the cross-attention if
the model is configured as a decoder.
encoder_attention_mask (`torch.FloatTensor` of shape `(batch_size, sequence_length)`, *optional*):
Mask to avoid performing attention on the padding token indices of the encoder input. This mask is used in
the cross-attention if the model is configured as a decoder. Mask values selected in `[0, 1]`:
cross_attn_head_mask (`torch.Tensor` of shape `(decoder_layers, decoder_attention_heads)`, *optional*):
Mask to nullify selected heads of the cross-attention modules. Mask values selected in `[0, 1]`:
- 1 indicates the head is **not masked**,
- 0 indicates the head is **masked**.
past_key_values (`tuple(tuple(torch.FloatTensor))` of length `config.n_layers` with each tuple having 4 tensors of shape `(batch_size, num_heads, sequence_length - 1, embed_size_per_head)`):
Contains precomputed key and value hidden-states of the attention blocks. Can be used to speed up decoding.
If `past_key_values` are used, the user can optionally input only the last `decoder_input_ids` (those that
don't have their past key value states given to this model) of shape `(batch_size, 1)` instead of all
`decoder_input_ids` of shape `(batch_size, sequence_length)`.
use_cache (`bool`, *optional*):
If set to `True`, `past_key_values` key value states are returned and can be used to speed up decoding (see
`past_key_values`).
- 1 for tokens that are **not masked**,
- 0 for tokens that are **masked**.
labels (`torch.LongTensor` of shape `(batch_size, sequence_length)`, *optional*):
Labels for computing the left-to-right language modeling loss (next word prediction). Indices should be in
`[-100, 0, ..., config.vocab_size]` (see `input_ids` docstring) Tokens with indices set to `-100` are
ignored (masked), the loss is only computed for the tokens with labels n `[0, ..., config.vocab_size]`
Returns:
Example:
```python
>>> from transformers import AutoTokenizer, ProphetNetForCausalLM
>>> import torch
>>> tokenizer = AutoTokenizer.from_pretrained("microsoft/prophetnet-large-uncased")
>>> model = ProphetNetForCausalLM.from_pretrained("microsoft/prophetnet-large-uncased")
>>> assert model.config.is_decoder, f"{model.__class__} has to be configured as a decoder."
>>> inputs = tokenizer("Hello, my dog is cute", return_tensors="pt")
>>> outputs = model(**inputs)
>>> logits = outputs.logits
>>> # Model can also be used with EncoderDecoder framework
>>> from transformers import BertTokenizer, EncoderDecoderModel, AutoTokenizer
>>> import torch
>>> tokenizer_enc = BertTokenizer.from_pretrained("bert-large-uncased")
>>> tokenizer_dec = AutoTokenizer.from_pretrained("microsoft/prophetnet-large-uncased")
>>> model = EncoderDecoderModel.from_encoder_decoder_pretrained(
... "bert-large-uncased", "microsoft/prophetnet-large-uncased"
... )
>>> ARTICLE = (
... "the us state department said wednesday it had received no "
... "formal word from bolivia that it was expelling the us ambassador there "
... "but said the charges made against him are `` baseless ."
... )
>>> input_ids = tokenizer_enc(ARTICLE, return_tensors="pt").input_ids
>>> labels = tokenizer_dec(
... "us rejects charges against its ambassador in bolivia", return_tensors="pt"
... ).input_ids
>>> outputs = model(input_ids=input_ids, decoder_input_ids=labels[:, :-1], labels=labels[:, 1:])
>>> loss = outputs.loss
```"""
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
# decoder outputs consists of (dec_features, past_key_values, dec_hidden, dec_attn)
outputs = self.prophetnet.decoder(
input_ids=input_ids,
attention_mask=attention_mask,
encoder_hidden_states=encoder_hidden_states,
encoder_attention_mask=encoder_attention_mask,
head_mask=head_mask,
cross_attn_head_mask=cross_attn_head_mask,
past_key_values=past_key_values,
inputs_embeds=inputs_embeds,
use_cache=use_cache,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
batch_size, sequence_length = input_ids.shape if input_ids is not None else inputs_embeds.shape[:2]
predicting_streams = outputs[1].view(batch_size, self.config.ngram, sequence_length, -1)
predict_logits = self.lm_head(predicting_streams)
logits = predict_logits[:, 0]
logits_ngram = predict_logits[:, 1:] if self.config.ngram > 1 else None
loss = None
if labels is not None:
loss = self._compute_loss(predict_logits, labels)
if not return_dict:
all_logits = tuple(v for v in [logits, logits_ngram] if v is not None)
return (loss,) + all_logits + outputs[2:] if loss is not None else all_logits + outputs[2:]
else:
return ProphetNetDecoderLMOutput(
loss=loss,
logits=logits,
logits_ngram=logits_ngram,
past_key_values=outputs.past_key_values,
hidden_states=outputs.hidden_states,
hidden_states_ngram=outputs.hidden_states_ngram,
attentions=outputs.attentions,
ngram_attentions=outputs.ngram_attentions,
cross_attentions=outputs.cross_attentions,
)
def _compute_loss(self, logits, labels, ignore_index=-100):
expend_targets = labels.new_zeros(self.config.ngram, labels.size(0), labels.size(1)).fill_(ignore_index)
for i in range(self.config.ngram):
if i > 0 and self.disable_ngram_loss:
break
expend_targets[i, :, :] = labels
logits = logits.transpose(0, 1).contiguous()
lprobs = nn.functional.log_softmax(
logits.view(-1, logits.size(-1)),
dim=-1,
dtype=torch.float32,
)
loss = nn.functional.nll_loss(lprobs, expend_targets.view(-1), reduction="mean")
if self.config.eps > 0.0:
smooth_loss = -lprobs.sum(dim=-1, keepdim=True)
non_masked_tokens = expend_targets.ne(ignore_index).view(-1)
smooth_loss = smooth_loss[non_masked_tokens]
smooth_loss = smooth_loss.mean()
eps_i = self.config.eps / lprobs.size(-1)
loss = (1.0 - self.config.eps) * loss + eps_i * smooth_loss
return loss
def prepare_inputs_for_generation(
self,
input_ids,
past_key_values=None,
attention_mask=None,
head_mask=None,
use_cache=None,
**kwargs,
):
# if model is used as a decoder in encoder-decoder model, the decoder attention mask is created on the fly
if attention_mask is None:
attention_mask = input_ids.new_ones(input_ids.shape)
if past_key_values:
input_ids = input_ids[:, -1:]
# first step, decoder_cached_states are empty
return {
"input_ids": input_ids, # encoder_outputs is defined. input_ids not needed
"attention_mask": attention_mask,
"head_mask": head_mask,
"past_key_values": past_key_values,
"use_cache": use_cache,
}
@staticmethod
# Copied from transformers.models.bart.modeling_bart.BartForCausalLM._reorder_cache
def _reorder_cache(past_key_values, beam_idx):
reordered_past = ()
for layer_past in past_key_values:
reordered_past += (tuple(past_state.index_select(0, beam_idx) for past_state in layer_past),)
return reordered_past
class ProphetNetDecoderWrapper(ProphetNetPreTrainedModel):
"""
This is a wrapper class, so that [`ProphetNetForCausalLM`] can correctly be loaded from pretrained prophetnet
classes.
"""
def __init__(self, config: ProphetNetConfig):
super().__init__(config)
self.decoder = ProphetNetDecoder(config)
def forward(self, *args, **kwargs):
return self.decoder(*args, **kwargs)
| 114,949 | 48.313599 | 198 | py |
transformers | transformers-main/src/transformers/models/speecht5/modeling_speecht5.py | # coding=utf-8
# Copyright 2023 The Fairseq Authors, Microsoft Research, and the HuggingFace Inc. team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
""" PyTorch SpeechT5 model."""
import math
import warnings
from typing import List, Optional, Tuple, Union
import numpy as np
import torch
import torch.utils.checkpoint
from torch import nn
from torch.nn import BCEWithLogitsLoss, CrossEntropyLoss, L1Loss
from ...activations import ACT2FN
from ...deepspeed import is_deepspeed_zero3_enabled
from ...modeling_outputs import (
BaseModelOutput,
BaseModelOutputWithPastAndCrossAttentions,
Seq2SeqLMOutput,
Seq2SeqModelOutput,
Seq2SeqSpectrogramOutput,
)
from ...modeling_utils import PreTrainedModel
from ...utils import add_start_docstrings, add_start_docstrings_to_model_forward, logging, replace_return_docstrings
from .configuration_speecht5 import SpeechT5Config, SpeechT5HifiGanConfig
logger = logging.get_logger(__name__)
_HIDDEN_STATES_START_POSITION = 1
# General docstring
_CONFIG_FOR_DOC = "SpeechT5Config"
SPEECHT5_PRETRAINED_MODEL_ARCHIVE_LIST = [
"microsoft/speecht5_asr",
"microsoft/speecht5_tts",
"microsoft/speecht5_vc",
# See all SpeechT5 models at https://huggingface.co/models?filter=speecht5
]
# Copied from transformers.models.bart.modeling_bart.shift_tokens_right
def shift_tokens_right(input_ids: torch.Tensor, pad_token_id: int, decoder_start_token_id: int):
"""
Shift input ids one token to the right.
"""
shifted_input_ids = input_ids.new_zeros(input_ids.shape)
shifted_input_ids[:, 1:] = input_ids[:, :-1].clone()
shifted_input_ids[:, 0] = decoder_start_token_id
if pad_token_id is None:
raise ValueError("self.model.config.pad_token_id has to be defined.")
# replace possible -100 values in labels by `pad_token_id`
shifted_input_ids.masked_fill_(shifted_input_ids == -100, pad_token_id)
return shifted_input_ids
def shift_spectrograms_right(input_values: torch.Tensor, reduction_factor: int = 1):
"""
Shift input spectrograms one timestep to the right. Also applies the reduction factor to the sequence length.
"""
# thin out frames for reduction factor
if reduction_factor > 1:
input_values = input_values[:, reduction_factor - 1 :: reduction_factor]
shifted_input_values = input_values.new_zeros(input_values.shape)
shifted_input_values[:, 1:] = input_values[:, :-1].clone()
# replace possible -100 values in labels by zeros
shifted_input_values.masked_fill_(shifted_input_values == -100.0, 0.0)
return shifted_input_values
# Copied from transformers.models.bart.modeling_bart._make_causal_mask
def _make_causal_mask(
input_ids_shape: torch.Size, dtype: torch.dtype, device: torch.device, past_key_values_length: int = 0
):
"""
Make causal mask used for bi-directional self-attention.
"""
bsz, tgt_len = input_ids_shape
mask = torch.full((tgt_len, tgt_len), torch.finfo(dtype).min, device=device)
mask_cond = torch.arange(mask.size(-1), device=device)
mask.masked_fill_(mask_cond < (mask_cond + 1).view(mask.size(-1), 1), 0)
mask = mask.to(dtype)
if past_key_values_length > 0:
mask = torch.cat([torch.zeros(tgt_len, past_key_values_length, dtype=dtype, device=device), mask], dim=-1)
return mask[None, None, :, :].expand(bsz, 1, tgt_len, tgt_len + past_key_values_length)
# Copied from transformers.models.bart.modeling_bart._expand_mask
def _expand_mask(mask: torch.Tensor, dtype: torch.dtype, tgt_len: Optional[int] = None):
"""
Expands attention_mask from `[bsz, seq_len]` to `[bsz, 1, tgt_seq_len, src_seq_len]`.
"""
bsz, src_len = mask.size()
tgt_len = tgt_len if tgt_len is not None else src_len
expanded_mask = mask[:, None, None, :].expand(bsz, 1, tgt_len, src_len).to(dtype)
inverted_mask = 1.0 - expanded_mask
return inverted_mask.masked_fill(inverted_mask.to(torch.bool), torch.finfo(dtype).min)
# Copied from transformers.models.wav2vec2.modeling_wav2vec2._compute_mask_indices
def _compute_mask_indices(
shape: Tuple[int, int],
mask_prob: float,
mask_length: int,
attention_mask: Optional[torch.LongTensor] = None,
min_masks: int = 0,
) -> np.ndarray:
"""
Computes random mask spans for a given shape. Used to implement [SpecAugment: A Simple Data Augmentation Method for
ASR](https://arxiv.org/abs/1904.08779). Note that this method is not optimized to run on TPU and should be run on
CPU as part of the preprocessing during training.
Args:
shape: The shape for which to compute masks. This should be of a tuple of size 2 where
the first element is the batch size and the second element is the length of the axis to span.
mask_prob: The percentage of the whole axis (between 0 and 1) which will be masked. The number of
independently generated mask spans of length `mask_length` is computed by
`mask_prob*shape[1]/mask_length`. Note that due to overlaps, `mask_prob` is an upper bound and the
actual percentage will be smaller.
mask_length: size of the mask
min_masks: minimum number of masked spans
attention_mask: A (right-padded) attention mask which independently shortens the feature axis of
each batch dimension.
"""
batch_size, sequence_length = shape
if mask_length < 1:
raise ValueError("`mask_length` has to be bigger than 0.")
if mask_length > sequence_length:
raise ValueError(
f"`mask_length` has to be smaller than `sequence_length`, but got `mask_length`: {mask_length}"
f" and `sequence_length`: {sequence_length}`"
)
# epsilon is used for probabilistic rounding
epsilon = np.random.rand(1).item()
def compute_num_masked_span(input_length):
"""Given input length, compute how many spans should be masked"""
num_masked_span = int(mask_prob * input_length / mask_length + epsilon)
num_masked_span = max(num_masked_span, min_masks)
# make sure num masked span <= sequence_length
if num_masked_span * mask_length > sequence_length:
num_masked_span = sequence_length // mask_length
# make sure num_masked span is also <= input_length - (mask_length - 1)
if input_length - (mask_length - 1) < num_masked_span:
num_masked_span = max(input_length - (mask_length - 1), 0)
return num_masked_span
# compute number of masked spans in batch
input_lengths = (
attention_mask.sum(-1).detach().tolist()
if attention_mask is not None
else [sequence_length for _ in range(batch_size)]
)
# SpecAugment mask to fill
spec_aug_mask = np.zeros((batch_size, sequence_length), dtype=bool)
spec_aug_mask_idxs = []
max_num_masked_span = compute_num_masked_span(sequence_length)
if max_num_masked_span == 0:
return spec_aug_mask
for input_length in input_lengths:
# compute num of masked spans for this input
num_masked_span = compute_num_masked_span(input_length)
# get random indices to mask
spec_aug_mask_idx = np.random.choice(
np.arange(input_length - (mask_length - 1)), num_masked_span, replace=False
)
# pick first sampled index that will serve as a dummy index to pad vector
# to ensure same dimension for all batches due to probabilistic rounding
# Picking first sample just pads those vectors twice.
if len(spec_aug_mask_idx) == 0:
# this case can only happen if `input_length` is strictly smaller then
# `sequence_length` in which case the last token has to be a padding
# token which we can use as a dummy mask id
dummy_mask_idx = sequence_length - 1
else:
dummy_mask_idx = spec_aug_mask_idx[0]
spec_aug_mask_idx = np.concatenate(
[spec_aug_mask_idx, np.ones(max_num_masked_span - num_masked_span, dtype=np.int32) * dummy_mask_idx]
)
spec_aug_mask_idxs.append(spec_aug_mask_idx)
spec_aug_mask_idxs = np.array(spec_aug_mask_idxs)
# expand masked indices to masked spans
spec_aug_mask_idxs = np.broadcast_to(
spec_aug_mask_idxs[:, :, None], (batch_size, max_num_masked_span, mask_length)
)
spec_aug_mask_idxs = spec_aug_mask_idxs.reshape(batch_size, max_num_masked_span * mask_length)
# add offset to the starting indexes so that indexes now create a span
offsets = np.arange(mask_length)[None, None, :]
offsets = np.broadcast_to(offsets, (batch_size, max_num_masked_span, mask_length)).reshape(
batch_size, max_num_masked_span * mask_length
)
spec_aug_mask_idxs = spec_aug_mask_idxs + offsets
# ensure that we cannot have indices larger than sequence_length
if spec_aug_mask_idxs.max() > sequence_length - 1:
spec_aug_mask_idxs[spec_aug_mask_idxs > sequence_length - 1] = sequence_length - 1
# scatter indices to mask
np.put_along_axis(spec_aug_mask, spec_aug_mask_idxs, 1, -1)
return spec_aug_mask
# Copied from transformers.models.wav2vec2.modeling_wav2vec2.Wav2Vec2NoLayerNormConvLayer with Wav2Vec2->SpeechT5
class SpeechT5NoLayerNormConvLayer(nn.Module):
def __init__(self, config, layer_id=0):
super().__init__()
self.in_conv_dim = config.conv_dim[layer_id - 1] if layer_id > 0 else 1
self.out_conv_dim = config.conv_dim[layer_id]
self.conv = nn.Conv1d(
self.in_conv_dim,
self.out_conv_dim,
kernel_size=config.conv_kernel[layer_id],
stride=config.conv_stride[layer_id],
bias=config.conv_bias,
)
self.activation = ACT2FN[config.feat_extract_activation]
def forward(self, hidden_states):
hidden_states = self.conv(hidden_states)
hidden_states = self.activation(hidden_states)
return hidden_states
# Copied from transformers.models.wav2vec2.modeling_wav2vec2.Wav2Vec2LayerNormConvLayer with Wav2Vec2->SpeechT5
class SpeechT5LayerNormConvLayer(nn.Module):
def __init__(self, config, layer_id=0):
super().__init__()
self.in_conv_dim = config.conv_dim[layer_id - 1] if layer_id > 0 else 1
self.out_conv_dim = config.conv_dim[layer_id]
self.conv = nn.Conv1d(
self.in_conv_dim,
self.out_conv_dim,
kernel_size=config.conv_kernel[layer_id],
stride=config.conv_stride[layer_id],
bias=config.conv_bias,
)
self.layer_norm = nn.LayerNorm(self.out_conv_dim, elementwise_affine=True)
self.activation = ACT2FN[config.feat_extract_activation]
def forward(self, hidden_states):
hidden_states = self.conv(hidden_states)
hidden_states = hidden_states.transpose(-2, -1)
hidden_states = self.layer_norm(hidden_states)
hidden_states = hidden_states.transpose(-2, -1)
hidden_states = self.activation(hidden_states)
return hidden_states
# Copied from transformers.models.wav2vec2.modeling_wav2vec2.Wav2Vec2GroupNormConvLayer with Wav2Vec2->SpeechT5
class SpeechT5GroupNormConvLayer(nn.Module):
def __init__(self, config, layer_id=0):
super().__init__()
self.in_conv_dim = config.conv_dim[layer_id - 1] if layer_id > 0 else 1
self.out_conv_dim = config.conv_dim[layer_id]
self.conv = nn.Conv1d(
self.in_conv_dim,
self.out_conv_dim,
kernel_size=config.conv_kernel[layer_id],
stride=config.conv_stride[layer_id],
bias=config.conv_bias,
)
self.activation = ACT2FN[config.feat_extract_activation]
self.layer_norm = nn.GroupNorm(num_groups=self.out_conv_dim, num_channels=self.out_conv_dim, affine=True)
def forward(self, hidden_states):
hidden_states = self.conv(hidden_states)
hidden_states = self.layer_norm(hidden_states)
hidden_states = self.activation(hidden_states)
return hidden_states
# Copied from transformers.models.speech_to_text.modeling_speech_to_text.Speech2TextSinusoidalPositionalEmbedding with Speech2Text->SpeechT5
class SpeechT5SinusoidalPositionalEmbedding(nn.Module):
"""This module produces sinusoidal positional embeddings of any length."""
def __init__(self, num_positions: int, embedding_dim: int, padding_idx: Optional[int] = None):
super().__init__()
self.offset = 2
self.embedding_dim = embedding_dim
self.padding_idx = padding_idx
self.make_weights(num_positions + self.offset, embedding_dim, padding_idx)
def make_weights(self, num_embeddings: int, embedding_dim: int, padding_idx: Optional[int] = None):
emb_weights = self.get_embedding(num_embeddings, embedding_dim, padding_idx)
if hasattr(self, "weights"):
# in forward put the weights on the correct dtype and device of the param
emb_weights = emb_weights.to(dtype=self.weights.dtype, device=self.weights.device)
self.weights = nn.Parameter(emb_weights)
self.weights.requires_grad = False
self.weights.detach_()
@staticmethod
def get_embedding(num_embeddings: int, embedding_dim: int, padding_idx: Optional[int] = None):
"""
Build sinusoidal embeddings. This matches the implementation in tensor2tensor, but differs slightly from the
description in Section 3.5 of "Attention Is All You Need".
"""
half_dim = embedding_dim // 2
emb = math.log(10000) / (half_dim - 1)
emb = torch.exp(torch.arange(half_dim, dtype=torch.float) * -emb)
emb = torch.arange(num_embeddings, dtype=torch.float).unsqueeze(1) * emb.unsqueeze(0)
emb = torch.cat([torch.sin(emb), torch.cos(emb)], dim=1).view(num_embeddings, -1)
if embedding_dim % 2 == 1:
# zero pad
emb = torch.cat([emb, torch.zeros(num_embeddings, 1)], dim=1)
if padding_idx is not None:
emb[padding_idx, :] = 0
return emb.to(torch.get_default_dtype())
@torch.no_grad()
def forward(self, input_ids: torch.Tensor, past_key_values_length: int = 0):
bsz, seq_len = input_ids.size()
# Create the position ids from the input token ids. Any padded tokens remain padded.
position_ids = self.create_position_ids_from_input_ids(input_ids, self.padding_idx, past_key_values_length).to(
input_ids.device
)
# expand embeddings if needed
max_pos = self.padding_idx + 1 + seq_len
if max_pos > self.weights.size(0):
self.make_weights(max_pos + self.offset, self.embedding_dim, self.padding_idx)
return self.weights.index_select(0, position_ids.view(-1)).view(bsz, seq_len, -1).detach()
def create_position_ids_from_input_ids(
self, input_ids: torch.Tensor, padding_idx: int, past_key_values_length: Optional[int] = 0
):
"""
Replace non-padding symbols with their position numbers. Position numbers begin at padding_idx+1. Padding
symbols are ignored. This is modified from fairseq's `utils.make_positions`.
Args:
x: torch.Tensor x:
Returns: torch.Tensor
"""
# The series of casts and type-conversions here are carefully balanced to both work with ONNX export and XLA.
mask = input_ids.ne(padding_idx).int()
incremental_indices = (torch.cumsum(mask, dim=1).type_as(mask) + past_key_values_length) * mask
return incremental_indices.long() + padding_idx
# Copied from transformers.models.wav2vec2.modeling_wav2vec2.Wav2Vec2PositionalConvEmbedding with Wav2Vec2->SpeechT5
class SpeechT5PositionalConvEmbedding(nn.Module):
def __init__(self, config):
super().__init__()
self.conv = nn.Conv1d(
config.hidden_size,
config.hidden_size,
kernel_size=config.num_conv_pos_embeddings,
padding=config.num_conv_pos_embeddings // 2,
groups=config.num_conv_pos_embedding_groups,
)
weight_norm = nn.utils.weight_norm
if hasattr(nn.utils.parametrizations, "weight_norm"):
weight_norm = nn.utils.parametrizations.weight_norm
if is_deepspeed_zero3_enabled():
import deepspeed
with deepspeed.zero.GatheredParameters(self.conv.weight, modifier_rank=0):
self.conv = weight_norm(self.conv, name="weight", dim=2)
deepspeed.zero.register_external_parameter(self, self.conv.weight_v)
deepspeed.zero.register_external_parameter(self, self.conv.weight_g)
else:
self.conv = weight_norm(self.conv, name="weight", dim=2)
self.padding = SpeechT5SamePadLayer(config.num_conv_pos_embeddings)
self.activation = ACT2FN[config.feat_extract_activation]
def forward(self, hidden_states):
hidden_states = hidden_states.transpose(1, 2)
hidden_states = self.conv(hidden_states)
hidden_states = self.padding(hidden_states)
hidden_states = self.activation(hidden_states)
hidden_states = hidden_states.transpose(1, 2)
return hidden_states
class SpeechT5ScaledPositionalEncoding(nn.Module):
"""
Scaled positional encoding, see §3.2 in https://arxiv.org/abs/1809.08895
"""
def __init__(self, dropout, dim, max_len=5000):
pe = torch.zeros(max_len, dim)
position = torch.arange(0, max_len).unsqueeze(1)
div_term = torch.exp((torch.arange(0, dim, 2, dtype=torch.float) * -(math.log(10000.0) / dim)))
pe[:, 0::2] = torch.sin(position.float() * div_term)
pe[:, 1::2] = torch.cos(position.float() * div_term)
pe = pe.unsqueeze(0)
super().__init__()
self.register_buffer("pe", pe, persistent=False)
self.dropout = nn.Dropout(p=dropout)
self.dim = dim
self.alpha = torch.nn.Parameter(torch.tensor(1.0))
def forward(self, emb):
emb = emb + self.alpha * self.pe[:, : emb.size(1)]
emb = self.dropout(emb)
return emb
class SpeechT5RelativePositionalEncoding(torch.nn.Module):
def __init__(self, dim, max_length=1000):
super().__init__()
self.dim = dim
self.max_length = max_length
self.pe_k = torch.nn.Embedding(2 * max_length, dim)
def forward(self, hidden_states):
seq_len = hidden_states.shape[1]
pos_seq = torch.arange(0, seq_len).long().to(hidden_states.device)
pos_seq = pos_seq[:, None] - pos_seq[None, :]
pos_seq[pos_seq < -self.max_length] = -self.max_length
pos_seq[pos_seq >= self.max_length] = self.max_length - 1
pos_seq = pos_seq + self.max_length
return self.pe_k(pos_seq)
# Copied from transformers.models.wav2vec2.modeling_wav2vec2.Wav2Vec2SamePadLayer with Wav2Vec2->SpeechT5
class SpeechT5SamePadLayer(nn.Module):
def __init__(self, num_conv_pos_embeddings):
super().__init__()
self.num_pad_remove = 1 if num_conv_pos_embeddings % 2 == 0 else 0
def forward(self, hidden_states):
if self.num_pad_remove > 0:
hidden_states = hidden_states[:, :, : -self.num_pad_remove]
return hidden_states
# Copied from transformers.models.wav2vec2.modeling_wav2vec2.Wav2Vec2FeatureEncoder with Wav2Vec2->SpeechT5
class SpeechT5FeatureEncoder(nn.Module):
"""Construct the features from raw audio waveform"""
def __init__(self, config):
super().__init__()
if config.feat_extract_norm == "group":
conv_layers = [SpeechT5GroupNormConvLayer(config, layer_id=0)] + [
SpeechT5NoLayerNormConvLayer(config, layer_id=i + 1) for i in range(config.num_feat_extract_layers - 1)
]
elif config.feat_extract_norm == "layer":
conv_layers = [
SpeechT5LayerNormConvLayer(config, layer_id=i) for i in range(config.num_feat_extract_layers)
]
else:
raise ValueError(
f"`config.feat_extract_norm` is {config.feat_extract_norm}, but has to be one of ['group', 'layer']"
)
self.conv_layers = nn.ModuleList(conv_layers)
self.gradient_checkpointing = False
self._requires_grad = True
def _freeze_parameters(self):
for param in self.parameters():
param.requires_grad = False
self._requires_grad = False
def forward(self, input_values):
hidden_states = input_values[:, None]
# make sure hidden_states require grad for gradient_checkpointing
if self._requires_grad and self.training:
hidden_states.requires_grad = True
for conv_layer in self.conv_layers:
if self._requires_grad and self.gradient_checkpointing and self.training:
def create_custom_forward(module):
def custom_forward(*inputs):
return module(*inputs)
return custom_forward
hidden_states = torch.utils.checkpoint.checkpoint(
create_custom_forward(conv_layer),
hidden_states,
)
else:
hidden_states = conv_layer(hidden_states)
return hidden_states
# Copied from transformers.models.wav2vec2.modeling_wav2vec2.Wav2Vec2FeatureProjection with Wav2Vec2->SpeechT5
class SpeechT5FeatureProjection(nn.Module):
def __init__(self, config):
super().__init__()
self.layer_norm = nn.LayerNorm(config.conv_dim[-1], eps=config.layer_norm_eps)
self.projection = nn.Linear(config.conv_dim[-1], config.hidden_size)
self.dropout = nn.Dropout(config.feat_proj_dropout)
def forward(self, hidden_states):
# non-projected hidden states are needed for quantization
norm_hidden_states = self.layer_norm(hidden_states)
hidden_states = self.projection(norm_hidden_states)
hidden_states = self.dropout(hidden_states)
return hidden_states, norm_hidden_states
class SpeechT5SpeechEncoderPrenet(nn.Module):
def __init__(self, config):
super().__init__()
self.config = config
self.feature_encoder = SpeechT5FeatureEncoder(config)
self.feature_projection = SpeechT5FeatureProjection(config)
# model only needs masking vector if mask prob is > 0.0
if config.mask_time_prob > 0.0 or config.mask_feature_prob > 0.0:
self.masked_spec_embed = nn.Parameter(torch.FloatTensor(config.hidden_size).uniform_())
self.pos_conv_embed = SpeechT5PositionalConvEmbedding(config)
self.pos_sinusoidal_embed = SpeechT5SinusoidalPositionalEmbedding(
config.max_speech_positions + config.pad_token_id + 1,
config.hidden_size,
config.pad_token_id,
)
def freeze_feature_encoder(self):
self.feature_encoder._freeze_parameters()
def forward(
self,
input_values: torch.Tensor,
attention_mask: Optional[torch.LongTensor] = None,
mask_time_indices: Optional[torch.FloatTensor] = None,
):
extract_features = self.feature_encoder(input_values)
extract_features = extract_features.transpose(1, 2)
if attention_mask is not None:
# compute reduced attention_mask corresponding to feature vectors
attention_mask = self._get_feature_vector_attention_mask(
extract_features.shape[1],
attention_mask,
)
hidden_states, extract_features = self.feature_projection(extract_features)
hidden_states = self._mask_hidden_states(
hidden_states, mask_time_indices=mask_time_indices, attention_mask=attention_mask
)
positional_conv_embedding = self.pos_conv_embed(hidden_states)
hidden_states = hidden_states + positional_conv_embedding
if attention_mask is not None:
padding_mask = attention_mask.ne(1).long()
else:
padding_mask = torch.zeros(hidden_states.shape[:2], dtype=torch.long, device=hidden_states.device)
positional_sinusoidal_embeddings = self.pos_sinusoidal_embed(padding_mask)
hidden_states = hidden_states + positional_sinusoidal_embeddings
return hidden_states, attention_mask
# Copied from transformers.models.unispeech.modeling_unispeech.UniSpeechPreTrainedModel._get_feature_vector_attention_mask
def _get_feature_vector_attention_mask(self, feature_vector_length: int, attention_mask: torch.LongTensor):
# Effectively attention_mask.sum(-1), but not inplace to be able to run
# on inference mode.
non_padded_lengths = attention_mask.cumsum(dim=-1)[:, -1]
output_lengths = self._get_feat_extract_output_lengths(non_padded_lengths).to(torch.long)
batch_size = attention_mask.shape[0]
attention_mask = torch.zeros(
(batch_size, feature_vector_length), dtype=attention_mask.dtype, device=attention_mask.device
)
# these two operations makes sure that all values before the output lengths idxs are attended to
attention_mask[(torch.arange(attention_mask.shape[0], device=attention_mask.device), output_lengths - 1)] = 1
attention_mask = attention_mask.flip([-1]).cumsum(-1).flip([-1]).bool()
return attention_mask
# Copied from transformers.models.unispeech.modeling_unispeech.UniSpeechPreTrainedModel._get_feat_extract_output_lengths
def _get_feat_extract_output_lengths(self, input_lengths: Union[torch.LongTensor, int]):
"""
Computes the output length of the convolutional layers
"""
def _conv_out_length(input_length, kernel_size, stride):
# 1D convolutional layer output length formula taken
# from https://pytorch.org/docs/stable/generated/torch.nn.Conv1d.html
return torch.div(input_length - kernel_size, stride, rounding_mode="floor") + 1
for kernel_size, stride in zip(self.config.conv_kernel, self.config.conv_stride):
input_lengths = _conv_out_length(input_lengths, kernel_size, stride)
return input_lengths
# Copied from transformers.models.wav2vec2.modeling_wav2vec2.Wav2Vec2Model._mask_hidden_states
def _mask_hidden_states(
self,
hidden_states: torch.FloatTensor,
mask_time_indices: Optional[torch.FloatTensor] = None,
attention_mask: Optional[torch.LongTensor] = None,
):
"""
Masks extracted features along time axis and/or along feature axis according to
[SpecAugment](https://arxiv.org/abs/1904.08779).
"""
# `config.apply_spec_augment` can set masking to False
if not getattr(self.config, "apply_spec_augment", True):
return hidden_states
# generate indices & apply SpecAugment along time axis
batch_size, sequence_length, hidden_size = hidden_states.size()
if mask_time_indices is not None:
# apply SpecAugment along time axis with given mask_time_indices
hidden_states[mask_time_indices] = self.masked_spec_embed.to(hidden_states.dtype)
elif self.config.mask_time_prob > 0 and self.training:
mask_time_indices = _compute_mask_indices(
(batch_size, sequence_length),
mask_prob=self.config.mask_time_prob,
mask_length=self.config.mask_time_length,
attention_mask=attention_mask,
min_masks=self.config.mask_time_min_masks,
)
mask_time_indices = torch.tensor(mask_time_indices, device=hidden_states.device, dtype=torch.bool)
hidden_states[mask_time_indices] = self.masked_spec_embed.to(hidden_states.dtype)
if self.config.mask_feature_prob > 0 and self.training:
# generate indices & apply SpecAugment along feature axis
mask_feature_indices = _compute_mask_indices(
(batch_size, hidden_size),
mask_prob=self.config.mask_feature_prob,
mask_length=self.config.mask_feature_length,
min_masks=self.config.mask_feature_min_masks,
)
mask_feature_indices = torch.tensor(mask_feature_indices, device=hidden_states.device, dtype=torch.bool)
mask_feature_indices = mask_feature_indices[:, None].expand(-1, sequence_length, -1)
hidden_states[mask_feature_indices] = 0
return hidden_states
class SpeechT5SpeechDecoderPrenet(nn.Module):
def __init__(self, config):
super().__init__()
self.config = config
self.layers = nn.ModuleList(
[
nn.Linear(
config.num_mel_bins if i == 0 else config.speech_decoder_prenet_units,
config.speech_decoder_prenet_units,
)
for i in range(config.speech_decoder_prenet_layers)
]
)
self.final_layer = nn.Linear(config.speech_decoder_prenet_units, config.hidden_size)
self.encode_positions = SpeechT5ScaledPositionalEncoding(
config.positional_dropout,
config.hidden_size,
config.max_speech_positions,
)
self.speaker_embeds_layer = nn.Linear(config.speaker_embedding_dim + config.hidden_size, config.hidden_size)
def forward(
self,
input_values: torch.Tensor,
speaker_embeddings: Optional[torch.Tensor] = None,
):
# Dropout is always applied, even when evaluating. See §2.2 in https://arxiv.org/abs/1712.05884.
inputs_embeds = input_values
for layer in self.layers:
inputs_embeds = nn.functional.relu(layer(inputs_embeds))
inputs_embeds = nn.functional.dropout(
inputs_embeds, self.config.speech_decoder_prenet_dropout, training=True
)
inputs_embeds = self.final_layer(inputs_embeds)
inputs_embeds = self.encode_positions(inputs_embeds)
if speaker_embeddings is not None:
speaker_embeddings = nn.functional.normalize(speaker_embeddings)
speaker_embeddings = speaker_embeddings.unsqueeze(1)
speaker_embeddings = speaker_embeddings.expand(-1, inputs_embeds.size(1), -1)
inputs_embeds = torch.cat([inputs_embeds, speaker_embeddings], dim=-1)
inputs_embeds = nn.functional.relu(self.speaker_embeds_layer(inputs_embeds))
return inputs_embeds
class SpeechT5BatchNormConvLayer(nn.Module):
def __init__(self, config, layer_id=0):
super().__init__()
if layer_id == 0:
in_conv_dim = config.num_mel_bins
else:
in_conv_dim = config.speech_decoder_postnet_units
if layer_id == config.speech_decoder_postnet_layers - 1:
out_conv_dim = config.num_mel_bins
else:
out_conv_dim = config.speech_decoder_postnet_units
self.conv = nn.Conv1d(
in_conv_dim,
out_conv_dim,
kernel_size=config.speech_decoder_postnet_kernel,
stride=1,
padding=(config.speech_decoder_postnet_kernel - 1) // 2,
bias=False,
)
self.batch_norm = nn.BatchNorm1d(out_conv_dim)
if layer_id < config.speech_decoder_postnet_layers - 1:
self.activation = nn.Tanh()
else:
self.activation = None
self.dropout = nn.Dropout(config.speech_decoder_postnet_dropout)
def forward(self, hidden_states):
hidden_states = self.conv(hidden_states)
hidden_states = self.batch_norm(hidden_states)
if self.activation is not None:
hidden_states = self.activation(hidden_states)
hidden_states = self.dropout(hidden_states)
return hidden_states
class SpeechT5SpeechDecoderPostnet(nn.Module):
def __init__(self, config):
super().__init__()
self.config = config
self.feat_out = nn.Linear(config.hidden_size, config.num_mel_bins * config.reduction_factor)
self.prob_out = nn.Linear(config.hidden_size, config.reduction_factor)
self.layers = nn.ModuleList(
[SpeechT5BatchNormConvLayer(config, i) for i in range(config.speech_decoder_postnet_layers)]
)
def forward(self, hidden_states: torch.Tensor):
outputs_before_postnet = self.feat_out(hidden_states).view(hidden_states.size(0), -1, self.config.num_mel_bins)
outputs_after_postnet = self.postnet(outputs_before_postnet)
logits = self.prob_out(hidden_states).view(hidden_states.size(0), -1)
return outputs_before_postnet, outputs_after_postnet, logits
def postnet(self, hidden_states: torch.Tensor):
layer_output = hidden_states.transpose(1, 2)
for layer in self.layers:
layer_output = layer(layer_output)
return hidden_states + layer_output.transpose(1, 2)
class SpeechT5TextEncoderPrenet(nn.Module):
def __init__(self, config):
super().__init__()
self.config = config
self.embed_tokens = nn.Embedding(config.vocab_size, config.hidden_size, config.pad_token_id)
self.encode_positions = SpeechT5ScaledPositionalEncoding(
config.positional_dropout,
config.hidden_size,
config.max_text_positions,
)
def get_input_embeddings(self):
return self.embed_tokens
def set_input_embeddings(self, value):
self.embed_tokens = value
def forward(self, input_ids: torch.Tensor):
inputs_embeds = self.embed_tokens(input_ids)
inputs_embeds = self.encode_positions(inputs_embeds)
return inputs_embeds
class SpeechT5TextDecoderPrenet(nn.Module):
def __init__(self, config):
super().__init__()
self.config = config
self.dropout = nn.Dropout(config.positional_dropout)
self.embed_scale = math.sqrt(config.hidden_size) if config.scale_embedding else 1.0
self.embed_tokens = nn.Embedding(config.vocab_size, config.hidden_size, config.pad_token_id)
self.embed_positions = SpeechT5SinusoidalPositionalEmbedding(
config.max_text_positions + config.pad_token_id + 1,
config.hidden_size,
config.pad_token_id,
)
def get_input_embeddings(self):
return self.embed_tokens
def set_input_embeddings(self, value):
self.embed_tokens = value
def forward(
self,
input_ids: torch.Tensor,
attention_mask: Optional[torch.LongTensor] = None,
past_key_values: Optional[List[torch.FloatTensor]] = None,
):
if input_ids is not None:
input_shape = input_ids.size()
input_ids = input_ids.view(-1, input_shape[-1])
else:
raise ValueError("You have to specify `decoder_input_ids`")
past_key_values_length = past_key_values[0][0].shape[2] if past_key_values is not None else 0
positions = self.embed_positions(input_ids, past_key_values_length)
inputs_embeds = self.embed_tokens(input_ids) * self.embed_scale
inputs_embeds += positions
inputs_embeds = self.dropout(inputs_embeds)
return inputs_embeds, attention_mask
class SpeechT5TextDecoderPostnet(nn.Module):
def __init__(self, config):
super().__init__()
self.config = config
self.lm_head = nn.Linear(config.hidden_size, config.vocab_size, bias=False)
def forward(self, hidden_states: torch.Tensor):
return self.lm_head(hidden_states)
def get_output_embeddings(self):
return self.lm_head
def set_output_embeddings(self, new_embeddings):
self.lm_head = new_embeddings
class SpeechT5Attention(nn.Module):
"""
Multi-headed attention from 'Attention Is All You Need' paper with relative position bias (see
https://aclanthology.org/N18-2074.pdf)
"""
def __init__(
self,
embed_dim: int,
num_heads: int,
dropout: float = 0.0,
is_decoder: bool = False,
bias: bool = True,
):
super().__init__()
self.embed_dim = embed_dim
self.num_heads = num_heads
self.dropout = dropout
self.head_dim = embed_dim // num_heads
if (self.head_dim * num_heads) != self.embed_dim:
raise ValueError(
f"embed_dim must be divisible by num_heads (got `embed_dim`: {self.embed_dim}"
f" and `num_heads`: {num_heads})."
)
self.scaling = self.head_dim**-0.5
self.is_decoder = is_decoder
self.k_proj = nn.Linear(embed_dim, embed_dim, bias=bias)
self.v_proj = nn.Linear(embed_dim, embed_dim, bias=bias)
self.q_proj = nn.Linear(embed_dim, embed_dim, bias=bias)
self.out_proj = nn.Linear(embed_dim, embed_dim, bias=bias)
def _shape(self, tensor: torch.Tensor, seq_len: int, bsz: int):
return tensor.view(bsz, seq_len, self.num_heads, self.head_dim).transpose(1, 2).contiguous()
def forward(
self,
hidden_states: torch.Tensor,
key_value_states: Optional[torch.Tensor] = None,
past_key_value: Optional[Tuple[torch.Tensor]] = None,
attention_mask: Optional[torch.Tensor] = None,
layer_head_mask: Optional[torch.Tensor] = None,
position_bias: Optional[torch.Tensor] = None,
output_attentions: bool = False,
) -> Tuple[torch.Tensor, Optional[torch.Tensor], Optional[Tuple[torch.Tensor]]]:
"""Input shape: Batch x Time x Channel"""
# if key_value_states are provided this layer is used as a cross-attention layer
# for the decoder
is_cross_attention = key_value_states is not None
bsz, tgt_len, _ = hidden_states.size()
# get query proj
query_states = self.q_proj(hidden_states) * self.scaling
# get key, value proj
if is_cross_attention and past_key_value is not None:
# reuse k,v, cross_attentions
key_states = past_key_value[0]
value_states = past_key_value[1]
elif is_cross_attention:
# cross_attentions
key_states = self._shape(self.k_proj(key_value_states), -1, bsz)
value_states = self._shape(self.v_proj(key_value_states), -1, bsz)
elif past_key_value is not None:
# reuse k, v, self_attention
key_states = self._shape(self.k_proj(hidden_states), -1, bsz)
value_states = self._shape(self.v_proj(hidden_states), -1, bsz)
key_states = torch.cat([past_key_value[0], key_states], dim=2)
value_states = torch.cat([past_key_value[1], value_states], dim=2)
else:
# self_attention
key_states = self._shape(self.k_proj(hidden_states), -1, bsz)
value_states = self._shape(self.v_proj(hidden_states), -1, bsz)
if self.is_decoder:
# if cross_attention save Tuple(torch.Tensor, torch.Tensor) of all cross attention key/value_states.
# Further calls to cross_attention layer can then reuse all cross-attention
# key/value_states (first "if" case)
# if uni-directional self-attention (decoder) save Tuple(torch.Tensor, torch.Tensor) of
# all previous decoder key/value_states. Further calls to uni-directional self-attention
# can concat previous decoder key/value_states to current projected key/value_states (third "elif" case)
# if encoder bi-directional self-attention `past_key_value` is always `None`
past_key_value = (key_states, value_states)
proj_shape = (bsz * self.num_heads, -1, self.head_dim)
query_states = self._shape(query_states, tgt_len, bsz).view(*proj_shape)
key_states = key_states.view(*proj_shape)
value_states = value_states.view(*proj_shape)
src_len = key_states.size(1)
attn_weights = torch.bmm(query_states, key_states.transpose(1, 2))
if attn_weights.size() != (bsz * self.num_heads, tgt_len, src_len):
raise ValueError(
f"Attention weights should be of size {(bsz * self.num_heads, tgt_len, src_len)}, but is"
f" {attn_weights.size()}"
)
# relative attention bias
if position_bias is not None:
reshape_q = query_states.contiguous().view(bsz * self.num_heads, -1, self.head_dim).transpose(0, 1)
rel_pos_bias = torch.matmul(reshape_q, position_bias.transpose(-2, -1))
rel_pos_bias = rel_pos_bias.transpose(0, 1).view(
bsz * self.num_heads, position_bias.size(0), position_bias.size(1)
)
attn_weights += rel_pos_bias
if attention_mask is not None:
if attention_mask.size() != (bsz, 1, tgt_len, src_len):
raise ValueError(
f"Attention mask should be of size {(bsz, 1, tgt_len, src_len)}, but is {attention_mask.size()}"
)
attn_weights = attn_weights.view(bsz, self.num_heads, tgt_len, src_len) + attention_mask
attn_weights = attn_weights.view(bsz * self.num_heads, tgt_len, src_len)
attn_weights = nn.functional.softmax(attn_weights, dim=-1)
if layer_head_mask is not None:
if layer_head_mask.size() != (self.num_heads,):
raise ValueError(
f"Head mask for a single layer should be of size {(self.num_heads,)}, but is"
f" {layer_head_mask.size()}"
)
attn_weights = layer_head_mask.view(1, -1, 1, 1) * attn_weights.view(bsz, self.num_heads, tgt_len, src_len)
attn_weights = attn_weights.view(bsz * self.num_heads, tgt_len, src_len)
if output_attentions:
# this operation is a bit awkward, but it's required to
# make sure that attn_weights keeps its gradient.
# In order to do so, attn_weights have to be reshaped
# twice and have to be reused in the following
attn_weights_reshaped = attn_weights.view(bsz, self.num_heads, tgt_len, src_len)
attn_weights = attn_weights_reshaped.view(bsz * self.num_heads, tgt_len, src_len)
else:
attn_weights_reshaped = None
attn_probs = nn.functional.dropout(attn_weights, p=self.dropout, training=self.training)
attn_output = torch.bmm(attn_probs, value_states)
if attn_output.size() != (bsz * self.num_heads, tgt_len, self.head_dim):
raise ValueError(
f"`attn_output` should be of size {(bsz, self.num_heads, tgt_len, self.head_dim)}, but is"
f" {attn_output.size()}"
)
attn_output = attn_output.view(bsz, self.num_heads, tgt_len, self.head_dim)
attn_output = attn_output.transpose(1, 2)
# Use the `embed_dim` from the config (stored in the class) rather than `hidden_state` because `attn_output` can be
# partitioned aross GPUs when using tensor-parallelism.
attn_output = attn_output.reshape(bsz, tgt_len, self.embed_dim)
attn_output = self.out_proj(attn_output)
return attn_output, attn_weights_reshaped, past_key_value
class SpeechT5FeedForward(nn.Module):
def __init__(self, config, intermediate_size):
super().__init__()
self.intermediate_dropout = nn.Dropout(config.activation_dropout)
self.intermediate_dense = nn.Linear(config.hidden_size, intermediate_size)
if isinstance(config.hidden_act, str):
self.intermediate_act_fn = ACT2FN[config.hidden_act]
else:
self.intermediate_act_fn = config.hidden_act
self.output_dense = nn.Linear(intermediate_size, config.hidden_size)
self.output_dropout = nn.Dropout(config.hidden_dropout)
def forward(self, hidden_states):
hidden_states = self.intermediate_dense(hidden_states)
hidden_states = self.intermediate_act_fn(hidden_states)
hidden_states = self.intermediate_dropout(hidden_states)
hidden_states = self.output_dense(hidden_states)
hidden_states = self.output_dropout(hidden_states)
return hidden_states
class SpeechT5EncoderLayer(nn.Module):
def __init__(self, config: SpeechT5Config):
super().__init__()
self.attention = SpeechT5Attention(
embed_dim=config.hidden_size,
num_heads=config.encoder_attention_heads,
dropout=config.attention_dropout,
is_decoder=False,
)
self.dropout = nn.Dropout(config.hidden_dropout)
self.layer_norm = nn.LayerNorm(config.hidden_size, eps=config.layer_norm_eps)
self.feed_forward = SpeechT5FeedForward(config, config.encoder_ffn_dim)
self.final_layer_norm = nn.LayerNorm(config.hidden_size, eps=config.layer_norm_eps)
def forward(
self,
hidden_states: torch.Tensor,
attention_mask: Optional[torch.Tensor] = None,
layer_head_mask: Optional[torch.Tensor] = None,
position_bias: Optional[torch.Tensor] = None,
output_attentions: bool = False,
):
"""
Args:
hidden_states (`torch.FloatTensor`):
input to the layer of shape `(batch, seq_len, hidden_size)`
attention_mask (`torch.FloatTensor`):
attention mask of size `(batch, 1, tgt_len, src_len)` where padding elements are indicated by very
large negative values.
layer_head_mask (`torch.FloatTensor`): mask for attention heads in a given layer of size
`(config.encoder_attention_heads,)`.
position_bias (`torch.FloatTensor`):
relative position embeddings of size `(seq_len, seq_len, hidden_size // encoder_attention_heads)`
output_attentions (`bool`, *optional*):
Whether or not to return the attentions tensors of all attention layers. See `attentions` under
returned tensors for more detail.
"""
residual = hidden_states
hidden_states, attn_weights, _ = self.attention(
hidden_states=hidden_states,
attention_mask=attention_mask,
layer_head_mask=layer_head_mask,
position_bias=position_bias,
output_attentions=output_attentions,
)
hidden_states = self.dropout(hidden_states)
hidden_states = residual + hidden_states
hidden_states = self.layer_norm(hidden_states)
hidden_states = hidden_states + self.feed_forward(hidden_states)
hidden_states = self.final_layer_norm(hidden_states)
outputs = (hidden_states,)
if output_attentions:
outputs += (attn_weights,)
return outputs
class SpeechT5DecoderLayer(nn.Module):
def __init__(self, config: SpeechT5Config):
super().__init__()
self.self_attn = SpeechT5Attention(
embed_dim=config.hidden_size,
num_heads=config.decoder_attention_heads,
dropout=config.attention_dropout,
is_decoder=True,
)
self.dropout = nn.Dropout(config.hidden_dropout)
self.self_attn_layer_norm = nn.LayerNorm(config.hidden_size, eps=config.layer_norm_eps)
self.encoder_attn = SpeechT5Attention(
config.hidden_size,
config.decoder_attention_heads,
dropout=config.attention_dropout,
is_decoder=True,
)
self.encoder_attn_layer_norm = nn.LayerNorm(config.hidden_size, eps=config.layer_norm_eps)
self.feed_forward = SpeechT5FeedForward(config, config.decoder_ffn_dim)
self.final_layer_norm = nn.LayerNorm(config.hidden_size, eps=config.layer_norm_eps)
def forward(
self,
hidden_states: torch.Tensor,
attention_mask: Optional[torch.Tensor] = None,
encoder_hidden_states: Optional[torch.Tensor] = None,
encoder_attention_mask: Optional[torch.Tensor] = None,
layer_head_mask: Optional[torch.Tensor] = None,
cross_attn_layer_head_mask: Optional[torch.Tensor] = None,
past_key_value: Optional[Tuple[torch.Tensor]] = None,
output_attentions: Optional[bool] = False,
use_cache: Optional[bool] = True,
):
"""
Args:
hidden_states (`torch.FloatTensor`): input to the layer of shape `(batch, seq_len, hidden_size)`
attention_mask (`torch.FloatTensor`): attention mask of size
`(batch, 1, tgt_len, src_len)` where padding elements are indicated by very large negative values.
encoder_hidden_states (`torch.FloatTensor`):
cross attention input to the layer of shape `(batch, seq_len, hidden_size)`
encoder_attention_mask (`torch.FloatTensor`): encoder attention mask of size
`(batch, 1, tgt_len, src_len)` where padding elements are indicated by very large negative values.
layer_head_mask (`torch.FloatTensor`): mask for attention heads in a given layer of size
`(encoder_attention_heads,)`.
cross_attn_layer_head_mask (`torch.FloatTensor`): mask for cross-attention heads in a given layer of
size `(decoder_attention_heads,)`.
past_key_value (`Tuple(torch.FloatTensor)`): cached past key and value projection states
output_attentions (`bool`, *optional*):
Whether or not to return the attentions tensors of all attention layers. See `attentions` under
returned tensors for more detail.
"""
residual = hidden_states
# Self Attention
# decoder uni-directional self-attention cached key/values tuple is at positions 1,2
self_attn_past_key_value = past_key_value[:2] if past_key_value is not None else None
# add present self-attn cache to positions 1,2 of present_key_value tuple
hidden_states, self_attn_weights, present_key_value = self.self_attn(
hidden_states=hidden_states,
past_key_value=self_attn_past_key_value,
attention_mask=attention_mask,
layer_head_mask=layer_head_mask,
output_attentions=output_attentions,
)
hidden_states = self.dropout(hidden_states)
hidden_states = residual + hidden_states
hidden_states = self.self_attn_layer_norm(hidden_states)
# Cross-Attention Block
cross_attn_present_key_value = None
cross_attn_weights = None
if encoder_hidden_states is not None:
residual = hidden_states
# cross_attn cached key/values tuple is at positions 3,4 of present_key_value tuple
cross_attn_past_key_value = past_key_value[-2:] if past_key_value is not None else None
hidden_states, cross_attn_weights, cross_attn_present_key_value = self.encoder_attn(
hidden_states=hidden_states,
key_value_states=encoder_hidden_states,
attention_mask=encoder_attention_mask,
layer_head_mask=cross_attn_layer_head_mask,
past_key_value=cross_attn_past_key_value,
output_attentions=output_attentions,
)
hidden_states = self.dropout(hidden_states)
hidden_states = residual + hidden_states
hidden_states = self.encoder_attn_layer_norm(hidden_states)
# add cross-attn to positions 3,4 of present_key_value tuple
present_key_value = present_key_value + cross_attn_present_key_value
# Fully Connected
hidden_states = hidden_states + self.feed_forward(hidden_states)
hidden_states = self.final_layer_norm(hidden_states)
outputs = (hidden_states,)
if output_attentions:
outputs += (self_attn_weights, cross_attn_weights)
if use_cache:
outputs += (present_key_value,)
return outputs
class SpeechT5PreTrainedModel(PreTrainedModel):
"""
An abstract class to handle weights initialization and a simple interface for downloading and loading pretrained
models.
"""
config_class = SpeechT5Config
base_model_prefix = "speecht5"
main_input_name = "input_values"
supports_gradient_checkpointing = True
def _init_weights(self, module):
"""Initialize the weights"""
if isinstance(module, SpeechT5PositionalConvEmbedding):
nn.init.normal_(
module.conv.weight,
mean=0,
std=2 * math.sqrt(1 / (module.conv.kernel_size[0] * module.conv.in_channels)),
)
nn.init.constant_(module.conv.bias, 0)
elif isinstance(module, SpeechT5FeatureProjection):
k = math.sqrt(1 / module.projection.in_features)
nn.init.uniform_(module.projection.weight, a=-k, b=k)
nn.init.uniform_(module.projection.bias, a=-k, b=k)
elif isinstance(module, nn.Linear):
module.weight.data.normal_(mean=0.0, std=self.config.initializer_range)
if module.bias is not None:
module.bias.data.zero_()
elif isinstance(module, (nn.LayerNorm, nn.GroupNorm)):
module.bias.data.zero_()
module.weight.data.fill_(1.0)
elif isinstance(module, nn.Conv1d):
nn.init.kaiming_normal_(module.weight)
if module.bias is not None:
k = math.sqrt(module.groups / (module.in_channels * module.kernel_size[0]))
nn.init.uniform_(module.bias, a=-k, b=k)
elif isinstance(module, nn.Embedding):
module.weight.data.normal_(mean=0.0, std=self.config.initializer_range)
if module.padding_idx is not None:
module.weight.data[module.padding_idx].zero_()
def _set_gradient_checkpointing(self, module, value=False):
if isinstance(module, (SpeechT5Encoder, SpeechT5Decoder, SpeechT5FeatureEncoder)):
module.gradient_checkpointing = value
class SpeechT5Encoder(SpeechT5PreTrainedModel):
"""
Transformer encoder consisting of *config.encoder_layers* layers. Each layer is a [`SpeechT5EncoderLayer`].
"""
def __init__(self, config: SpeechT5Config):
super().__init__(config)
self.layer_norm = nn.LayerNorm(config.hidden_size, eps=config.layer_norm_eps)
self.dropout = nn.Dropout(config.hidden_dropout)
self.layerdrop = config.encoder_layerdrop
self.layers = nn.ModuleList([SpeechT5EncoderLayer(config) for _ in range(config.encoder_layers)])
self.embed_positions = SpeechT5RelativePositionalEncoding(
config.hidden_size // config.encoder_attention_heads, config.encoder_max_relative_position
)
self.gradient_checkpointing = False
# Initialize weights and apply final processing
self.post_init()
def forward(
self,
hidden_states: torch.FloatTensor,
attention_mask: Optional[torch.Tensor] = None,
head_mask: Optional[torch.Tensor] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[Tuple, BaseModelOutput]:
"""
Args:
hidden_states (`torch.FloatTensor` of shape `(batch_size, sequence_length, feature_size)`):
Features extracted from the speech or text input by the encoder prenet.
attention_mask (`torch.Tensor` of shape `(batch_size, sequence_length)`, *optional*):
Mask to avoid performing convolution and attention on padding token indices. Mask values selected in
`[0, 1]`:
- 1 for tokens that are **not masked**,
- 0 for tokens that are **masked**.
[What are attention masks?](../glossary#attention-mask)
output_attentions (`bool`, *optional*):
Whether or not to return the attentions tensors of all attention layers. See `attentions` under
returned tensors for more detail.
head_mask (`torch.Tensor` of shape `(encoder_layers, encoder_attention_heads)`, *optional*):
Mask to nullify selected heads of the attention modules. Mask values selected in `[0, 1]`:
- 1 indicates the head is **not masked**,
- 0 indicates the head is **masked**.
output_hidden_states (`bool`, *optional*):
Whether or not to return the hidden states of all layers. See `hidden_states` under returned tensors
for more detail.
return_dict (`bool`, *optional*):
Whether or not to return a [`~utils.ModelOutput`] instead of a plain tuple.
"""
output_attentions = output_attentions if output_attentions is not None else self.config.output_attentions
output_hidden_states = (
output_hidden_states if output_hidden_states is not None else self.config.output_hidden_states
)
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
# expand attention_mask
if attention_mask is not None:
# [bsz, seq_len] -> [bsz, 1, tgt_seq_len, src_seq_len]
attention_mask = _expand_mask(attention_mask, hidden_states.dtype)
hidden_states = self.layer_norm(hidden_states)
hidden_states = self.dropout(hidden_states)
position_bias = self.embed_positions(hidden_states)
deepspeed_zero3_is_enabled = is_deepspeed_zero3_enabled()
all_hidden_states = () if output_hidden_states else None
all_self_attentions = () if output_attentions else None
# check if head_mask has a correct number of layers specified if desired
if head_mask is not None:
if head_mask.size()[0] != len(self.layers):
raise ValueError(
f"The head_mask should be specified for {len(self.layers)} layers, but it is for"
f" {head_mask.size()[0]}."
)
for idx, encoder_layer in enumerate(self.layers):
if output_hidden_states:
all_hidden_states = all_hidden_states + (hidden_states,)
# add LayerDrop (see https://arxiv.org/abs/1909.11556 for description)
skip_the_layer = False
if self.training:
dropout_probability = torch.rand([])
skip_the_layer = dropout_probability < self.layerdrop
if not skip_the_layer or deepspeed_zero3_is_enabled:
# under deepspeed zero3 all gpus must run in sync
if self.gradient_checkpointing and self.training:
# create gradient checkpointing function
def create_custom_forward(module):
def custom_forward(*inputs):
return module(*inputs, output_attentions)
return custom_forward
layer_outputs = torch.utils.checkpoint.checkpoint(
create_custom_forward(encoder_layer),
hidden_states,
attention_mask,
(head_mask[idx] if head_mask is not None else None),
position_bias,
)
else:
layer_outputs = encoder_layer(
hidden_states,
attention_mask=attention_mask,
position_bias=position_bias,
layer_head_mask=(head_mask[idx] if head_mask is not None else None),
output_attentions=output_attentions,
)
hidden_states = layer_outputs[0]
if skip_the_layer:
layer_outputs = (None, None)
if output_attentions:
all_self_attentions = all_self_attentions + (layer_outputs[1],)
if output_hidden_states:
all_hidden_states = all_hidden_states + (hidden_states,)
if not return_dict:
return tuple(v for v in [hidden_states, all_hidden_states, all_self_attentions] if v is not None)
return BaseModelOutput(
last_hidden_state=hidden_states,
hidden_states=all_hidden_states,
attentions=all_self_attentions,
)
class SpeechT5EncoderWithSpeechPrenet(SpeechT5PreTrainedModel):
"""
Wrapper around SpeechT5Encoder that applies SpeechT5SpeechEncoderPrenet to convert the audio waveform data to
hidden features.
"""
def __init__(self, config: SpeechT5Config):
super().__init__(config)
self.prenet = SpeechT5SpeechEncoderPrenet(config)
self.wrapped_encoder = SpeechT5Encoder(config)
self.gradient_checkpointing = False
# Initialize weights and apply final processing
self.post_init()
def forward(
self,
input_values: torch.FloatTensor,
attention_mask: Optional[torch.Tensor] = None,
head_mask: Optional[torch.Tensor] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[Tuple, BaseModelOutput]:
hidden_states, attention_mask = self.prenet(input_values, attention_mask)
outputs = self.wrapped_encoder(
hidden_states=hidden_states,
attention_mask=attention_mask,
head_mask=head_mask,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
return outputs
class SpeechT5EncoderWithTextPrenet(SpeechT5PreTrainedModel):
"""
Wrapper around SpeechT5Encoder that applies SpeechT5TextEncoderPrenet to convert the input_ids to hidden features.
"""
def __init__(self, config: SpeechT5Config):
super().__init__(config)
self.prenet = SpeechT5TextEncoderPrenet(config)
self.wrapped_encoder = SpeechT5Encoder(config)
self.gradient_checkpointing = False
# Initialize weights and apply final processing
self.post_init()
def get_input_embeddings(self):
return self.prenet.get_input_embeddings()
def set_input_embeddings(self, value):
self.prenet.set_input_embeddings(value)
def forward(
self,
input_values: torch.FloatTensor,
attention_mask: Optional[torch.Tensor] = None,
head_mask: Optional[torch.Tensor] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[Tuple, BaseModelOutput]:
hidden_states = self.prenet(input_values)
outputs = self.wrapped_encoder(
hidden_states=hidden_states,
attention_mask=attention_mask,
head_mask=head_mask,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
return outputs
class SpeechT5EncoderWithoutPrenet(SpeechT5PreTrainedModel):
"""
This wrapper class is a helper class to correctly load pretrained checkpoints when used in combination with
[`SpeechT5Model`].
"""
def __init__(self, config: SpeechT5Config):
super().__init__(config)
self.wrapped_encoder = SpeechT5Encoder(config)
self.gradient_checkpointing = False
# Initialize weights and apply final processing
self.post_init()
def forward(
self,
input_values: torch.FloatTensor,
attention_mask: Optional[torch.Tensor] = None,
head_mask: Optional[torch.Tensor] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[Tuple, BaseModelOutput]:
return self.wrapped_encoder(
hidden_states=input_values,
attention_mask=attention_mask,
head_mask=head_mask,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
class SpeechT5Decoder(SpeechT5PreTrainedModel):
"""
Transformer decoder consisting of *config.decoder_layers* layers. Each layer is a [`SpeechT5DecoderLayer`]
"""
def __init__(self, config: SpeechT5Config):
super().__init__(config)
self.layerdrop = config.decoder_layerdrop
self.layers = nn.ModuleList([SpeechT5DecoderLayer(config) for _ in range(config.decoder_layers)])
self.gradient_checkpointing = False
# Initialize weights and apply final processing
self.post_init()
# Copied from transformers.models.bart.modeling_bart.BartDecoder._prepare_decoder_attention_mask
def _prepare_decoder_attention_mask(self, attention_mask, input_shape, inputs_embeds, past_key_values_length):
# create causal mask
# [bsz, seq_len] -> [bsz, 1, tgt_seq_len, src_seq_len]
combined_attention_mask = None
if input_shape[-1] > 1:
combined_attention_mask = _make_causal_mask(
input_shape,
inputs_embeds.dtype,
device=inputs_embeds.device,
past_key_values_length=past_key_values_length,
)
if attention_mask is not None:
# [bsz, seq_len] -> [bsz, 1, tgt_seq_len, src_seq_len]
expanded_attn_mask = _expand_mask(attention_mask, inputs_embeds.dtype, tgt_len=input_shape[-1]).to(
inputs_embeds.device
)
combined_attention_mask = (
expanded_attn_mask if combined_attention_mask is None else expanded_attn_mask + combined_attention_mask
)
return combined_attention_mask
def forward(
self,
hidden_states: Optional[torch.FloatTensor] = None,
attention_mask: Optional[torch.LongTensor] = None,
encoder_hidden_states: Optional[torch.FloatTensor] = None,
encoder_attention_mask: Optional[torch.LongTensor] = None,
head_mask: Optional[torch.Tensor] = None,
cross_attn_head_mask: Optional[torch.Tensor] = None,
past_key_values: Optional[List[torch.FloatTensor]] = None,
use_cache: Optional[bool] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[Tuple, BaseModelOutputWithPastAndCrossAttentions]:
r"""
Args:
hidden_states (`torch.FloatTensor` of shape `(batch_size, sequence_length, feature_size)`):
Features extracted from the speech or text input by the decoder prenet.
attention_mask (`torch.LongTensor` of shape `(batch_size, sequence_length)`, *optional*):
Mask to avoid performing attention on padding token indices. Mask values selected in `[0, 1]`:
- 1 for tokens that are **not masked**,
- 0 for tokens that are **masked**.
[What are attention masks?](../glossary#attention-mask)
encoder_hidden_states (`torch.FloatTensor` of shape `(batch_size, encoder_sequence_length, hidden_size)`, *optional*):
Sequence of hidden-states at the output of the last layer of the encoder. Used in the cross-attention
of the decoder.
encoder_attention_mask (`torch.LongTensor` of shape `(batch_size, encoder_sequence_length)`, *optional*):
Mask to avoid performing cross-attention on padding tokens indices of encoder input_ids. Mask values
selected in `[0, 1]`:
- 1 for tokens that are **not masked**,
- 0 for tokens that are **masked**.
[What are attention masks?](../glossary#attention-mask)
head_mask (`torch.Tensor` of shape `(decoder_layers, decoder_attention_heads)`, *optional*):
Mask to nullify selected heads of the attention modules. Mask values selected in `[0, 1]`:
- 1 indicates the head is **not masked**,
- 0 indicates the head is **masked**.
cross_attn_head_mask (`torch.Tensor` of shape `(decoder_layers, decoder_attention_heads)`, *optional*):
Mask to nullify selected heads of the cross-attention modules in the decoder to avoid performing
cross-attention on hidden heads. Mask values selected in `[0, 1]`:
- 1 indicates the head is **not masked**,
- 0 indicates the head is **masked**.
past_key_values (`tuple(tuple(torch.FloatTensor))`, *optional*, returned when `use_cache=True` is passed or when `config.use_cache=True`):
Tuple of `tuple(torch.FloatTensor)` of length `config.n_layers`, with each tuple having 2 tensors of
shape `(batch_size, num_heads, sequence_length, embed_size_per_head)`) and 2 additional tensors of
shape `(batch_size, num_heads, encoder_sequence_length, embed_size_per_head)`.
Contains pre-computed hidden-states (key and values in the self-attention blocks and in the
cross-attention blocks) that can be used (see `past_key_values` input) to speed up sequential decoding.
If `past_key_values` are used, the user can optionally input only the last `decoder_input_ids` (those
that don't have their past key value states given to this model) of shape `(batch_size, 1)` instead of
all `decoder_input_ids` of shape `(batch_size, sequence_length)`. inputs_embeds (`torch.FloatTensor` of
shape `(batch_size, sequence_length, hidden_size)`, *optional*): Optionally, instead of passing
`input_ids` you can choose to directly pass an embedded representation. This is useful if you want more
control over how to convert `input_ids` indices into associated vectors than the model's internal
embedding lookup matrix.
output_attentions (`bool`, *optional*):
Whether or not to return the attentions tensors of all attention layers. See `attentions` under
returned tensors for more detail.
output_hidden_states (`bool`, *optional*):
Whether or not to return the hidden states of all layers. See `hidden_states` under returned tensors
for more detail.
return_dict (`bool`, *optional*):
Whether or not to return a [`~utils.ModelOutput`] instead of a plain tuple.
"""
output_attentions = output_attentions if output_attentions is not None else self.config.output_attentions
output_hidden_states = (
output_hidden_states if output_hidden_states is not None else self.config.output_hidden_states
)
use_cache = use_cache if use_cache is not None else self.config.use_cache
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
input_shape = hidden_states.size()[:-1]
past_key_values_length = past_key_values[0][0].shape[2] if past_key_values is not None else 0
attention_mask = self._prepare_decoder_attention_mask(
attention_mask, input_shape, hidden_states, past_key_values_length
)
# expand encoder attention mask
if encoder_hidden_states is not None and encoder_attention_mask is not None:
# [bsz, seq_len] -> [bsz, 1, tgt_seq_len, src_seq_len]
encoder_attention_mask = _expand_mask(encoder_attention_mask, hidden_states.dtype, tgt_len=input_shape[-1])
deepspeed_zero3_is_enabled = is_deepspeed_zero3_enabled()
if self.gradient_checkpointing and self.training:
if use_cache:
logger.warning_once(
"`use_cache=True` is incompatible with gradient checkpointing. Setting `use_cache=False`..."
)
use_cache = False
# decoder layers
all_hidden_states = () if output_hidden_states else None
all_self_attentions = () if output_attentions else None
all_cross_attentions = () if (output_attentions and encoder_hidden_states is not None) else None
next_decoder_cache = () if use_cache else None
# check if head_mask/cross_attn_head_mask has a correct number of layers specified if desired
for attn_mask, mask_name in zip([head_mask, cross_attn_head_mask], ["head_mask", "cross_attn_head_mask"]):
if attn_mask is not None:
if attn_mask.size()[0] != (len(self.layers)):
raise ValueError(
f"The `{mask_name}` should be specified for {len(self.layers)} layers, but it is for"
f" {head_mask.size()[0]}."
)
for idx, decoder_layer in enumerate(self.layers):
if output_hidden_states:
all_hidden_states = all_hidden_states + (hidden_states,)
# add LayerDrop (see https://arxiv.org/abs/1909.11556 for description)
skip_the_layer = False
if self.training:
dropout_probability = torch.rand([])
skip_the_layer = dropout_probability < self.layerdrop
if skip_the_layer and not deepspeed_zero3_is_enabled:
continue
past_key_value = past_key_values[idx] if past_key_values is not None else None
if self.gradient_checkpointing and self.training:
def create_custom_forward(module):
def custom_forward(*inputs):
# None for past_key_value
return module(*inputs, output_attentions, use_cache)
return custom_forward
layer_outputs = torch.utils.checkpoint.checkpoint(
create_custom_forward(decoder_layer),
hidden_states,
attention_mask,
encoder_hidden_states,
encoder_attention_mask,
head_mask[idx] if head_mask is not None else None,
cross_attn_head_mask[idx] if cross_attn_head_mask is not None else None,
None,
)
else:
layer_outputs = decoder_layer(
hidden_states,
attention_mask=attention_mask,
encoder_hidden_states=encoder_hidden_states,
encoder_attention_mask=encoder_attention_mask,
layer_head_mask=(head_mask[idx] if head_mask is not None else None),
cross_attn_layer_head_mask=(
cross_attn_head_mask[idx] if cross_attn_head_mask is not None else None
),
past_key_value=past_key_value,
output_attentions=output_attentions,
use_cache=use_cache,
)
hidden_states = layer_outputs[0]
if use_cache:
next_decoder_cache += (layer_outputs[3 if output_attentions else 1],)
if output_attentions:
all_self_attentions = all_self_attentions + (layer_outputs[1],)
if encoder_hidden_states is not None:
all_cross_attentions = all_cross_attentions + (layer_outputs[2],)
if output_hidden_states:
all_hidden_states = all_hidden_states + (hidden_states,)
next_cache = next_decoder_cache if use_cache else None
if not return_dict:
return tuple(
v
for v in [hidden_states, next_cache, all_hidden_states, all_self_attentions, all_cross_attentions]
if v is not None
)
return BaseModelOutputWithPastAndCrossAttentions(
last_hidden_state=hidden_states,
past_key_values=next_cache,
hidden_states=all_hidden_states,
attentions=all_self_attentions,
cross_attentions=all_cross_attentions,
)
class SpeechT5DecoderWithSpeechPrenet(SpeechT5PreTrainedModel):
"""
Wrapper around SpeechT5Decoder that applies SpeechT5SpeechDecoderPrenet to convert log-mel filterbanks to hidden
features.
"""
def __init__(self, config: SpeechT5Config):
super().__init__(config)
self.prenet = SpeechT5SpeechDecoderPrenet(config)
self.wrapped_decoder = SpeechT5Decoder(config)
self.gradient_checkpointing = False
# Initialize weights and apply final processing
self.post_init()
def forward(
self,
input_values: Optional[torch.FloatTensor] = None,
attention_mask: Optional[torch.LongTensor] = None,
encoder_hidden_states: Optional[torch.FloatTensor] = None,
encoder_attention_mask: Optional[torch.LongTensor] = None,
speaker_embeddings: Optional[torch.Tensor] = None,
head_mask: Optional[torch.Tensor] = None,
cross_attn_head_mask: Optional[torch.Tensor] = None,
past_key_values: Optional[List[torch.FloatTensor]] = None,
use_cache: Optional[bool] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[Tuple, BaseModelOutputWithPastAndCrossAttentions]:
decoder_hidden_states = self.prenet(input_values, speaker_embeddings)
outputs = self.wrapped_decoder(
hidden_states=decoder_hidden_states,
attention_mask=attention_mask,
encoder_hidden_states=encoder_hidden_states,
encoder_attention_mask=encoder_attention_mask,
head_mask=head_mask,
cross_attn_head_mask=cross_attn_head_mask,
past_key_values=past_key_values,
use_cache=use_cache,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
return outputs
class SpeechT5DecoderWithTextPrenet(SpeechT5PreTrainedModel):
"""
Wrapper around SpeechT5Decoder that applies SpeechT5TextDecoderPrenet to convert input tokens to hidden features.
"""
def __init__(self, config: SpeechT5Config):
super().__init__(config)
self.prenet = SpeechT5TextDecoderPrenet(config)
self.wrapped_decoder = SpeechT5Decoder(config)
self.gradient_checkpointing = False
# Initialize weights and apply final processing
self.post_init()
def get_input_embeddings(self):
return self.prenet.get_input_embeddings()
def set_input_embeddings(self, value):
self.prenet.set_input_embeddings(value)
def forward(
self,
input_values: Optional[torch.FloatTensor] = None,
attention_mask: Optional[torch.LongTensor] = None,
encoder_hidden_states: Optional[torch.FloatTensor] = None,
encoder_attention_mask: Optional[torch.LongTensor] = None,
head_mask: Optional[torch.Tensor] = None,
cross_attn_head_mask: Optional[torch.Tensor] = None,
past_key_values: Optional[List[torch.FloatTensor]] = None,
use_cache: Optional[bool] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[Tuple, BaseModelOutputWithPastAndCrossAttentions]:
decoder_hidden_states, attention_mask = self.prenet(input_values, attention_mask, past_key_values)
outputs = self.wrapped_decoder(
hidden_states=decoder_hidden_states,
attention_mask=attention_mask,
encoder_hidden_states=encoder_hidden_states,
encoder_attention_mask=encoder_attention_mask,
head_mask=head_mask,
cross_attn_head_mask=cross_attn_head_mask,
past_key_values=past_key_values,
use_cache=use_cache,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
return outputs
class SpeechT5DecoderWithoutPrenet(SpeechT5PreTrainedModel):
"""
This wrapper class is a helper class to correctly load pretrained checkpoints when used in combination with
[`SpeechT5Model`].
"""
def __init__(self, config: SpeechT5Config):
super().__init__(config)
self.wrapped_decoder = SpeechT5Decoder(config)
self.gradient_checkpointing = False
# Initialize weights and apply final processing
self.post_init()
def forward(
self,
input_values: Optional[torch.FloatTensor] = None,
attention_mask: Optional[torch.LongTensor] = None,
encoder_hidden_states: Optional[torch.FloatTensor] = None,
encoder_attention_mask: Optional[torch.LongTensor] = None,
head_mask: Optional[torch.Tensor] = None,
cross_attn_head_mask: Optional[torch.Tensor] = None,
past_key_values: Optional[List[torch.FloatTensor]] = None,
use_cache: Optional[bool] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[Tuple, BaseModelOutputWithPastAndCrossAttentions]:
outputs = self.wrapped_decoder(
hidden_states=input_values,
attention_mask=attention_mask,
encoder_hidden_states=encoder_hidden_states,
encoder_attention_mask=encoder_attention_mask,
head_mask=head_mask,
cross_attn_head_mask=cross_attn_head_mask,
past_key_values=past_key_values,
use_cache=use_cache,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
return outputs
class SpeechT5GuidedMultiheadAttentionLoss(nn.Module):
"""
Guided attention loss from the paper [Efficiently Trainable Text-to-Speech System Based on Deep Convolutional
Networks with Guided Attention](https://arxiv.org/abs/1710.08969), adapted for multi-head attention.
"""
def __init__(self, config: SpeechT5Config):
super().__init__()
self.sigma = config.guided_attention_loss_sigma
self.scale = config.guided_attention_loss_scale
def forward(
self, attentions: torch.FloatTensor, input_masks: torch.BoolTensor, output_masks: torch.BoolTensor
) -> torch.Tensor:
"""
Compute the attention loss.
Args:
attentions (`torch.FloatTensor` of shape `(batch_size, layers * heads, output_sequence_length, input_sequence_length)`):
Batch of multi-head attention weights
input_masks (`torch.BoolTensor` of shape `(batch_size, input_sequence_length)`):
Input attention mask as booleans.
output_masks (`torch.BoolTensor` of shape `(batch_size, output_sequence_length)`):
Target attention mask as booleans.
Returns:
`torch.Tensor` with the loss value
"""
guided_attn_masks = self._make_guided_attention_masks(input_masks, output_masks, attentions.device)
masks = output_masks.unsqueeze(-1) & input_masks.unsqueeze(-2)
masks = masks.to(attentions.device).unsqueeze(1)
losses = guided_attn_masks * attentions
loss = torch.mean(losses.masked_select(masks))
return self.scale * loss
def _make_guided_attention_masks(self, input_masks, output_masks, device):
input_lengths = input_masks.sum(-1)
output_lengths = output_masks.sum(-1)
guided_attn_masks = torch.zeros((len(input_masks), output_masks.shape[1], input_masks.shape[1]), device=device)
for idx, (ilen, olen) in enumerate(zip(input_lengths, output_lengths)):
guided_attn_masks[idx, :olen, :ilen] = self._make_guided_attention_mask(ilen, olen, self.sigma, device)
return guided_attn_masks.unsqueeze(1)
@staticmethod
def _make_guided_attention_mask(input_length, output_length, sigma, device):
grid_y, grid_x = torch.meshgrid(
torch.arange(input_length, device=device),
torch.arange(output_length, device=device),
indexing="xy",
)
grid_x = grid_x.float() / output_length
grid_y = grid_y.float() / input_length
return 1.0 - torch.exp(-((grid_y - grid_x) ** 2) / (2 * (sigma**2)))
class SpeechT5SpectrogramLoss(nn.Module):
"""
Loss computation used by SpeechT5ForTextToSpeech.
"""
def __init__(self, config: SpeechT5Config):
super().__init__()
self.use_guided_attention_loss = config.use_guided_attention_loss
self.guided_attention_loss_num_heads = config.guided_attention_loss_num_heads
self.reduction_factor = config.reduction_factor
self.l1_criterion = L1Loss()
self.bce_criterion = BCEWithLogitsLoss(pos_weight=torch.tensor(5.0))
if self.use_guided_attention_loss:
self.attn_criterion = SpeechT5GuidedMultiheadAttentionLoss(config)
def forward(
self,
attention_mask: torch.LongTensor,
outputs_before_postnet: torch.FloatTensor,
outputs_after_postnet: torch.FloatTensor,
logits: torch.FloatTensor,
labels: torch.FloatTensor,
cross_attentions: Optional[torch.FloatTensor] = None,
) -> torch.Tensor:
padding_mask = labels != -100.0
# mask out the padded portions
labels = labels.masked_select(padding_mask)
outputs_before_postnet = outputs_before_postnet.masked_select(padding_mask)
outputs_after_postnet = outputs_after_postnet.masked_select(padding_mask)
# spectrogram loss
l1_loss = self.l1_criterion(outputs_after_postnet, labels) + self.l1_criterion(outputs_before_postnet, labels)
# construct stop labels from the padding mask
masks = padding_mask[:, :, 0]
stop_labels = torch.cat([~masks * 1.0, torch.ones(masks.size(0), 1).to(masks.device)], dim=1)
stop_labels = stop_labels[:, 1:].masked_select(masks)
logits = logits.masked_select(masks)
# stop token loss
bce_loss = self.bce_criterion(logits, stop_labels)
# combined loss
loss = l1_loss + bce_loss
# guided attention loss
if self.use_guided_attention_loss:
attn = torch.cat([x[:, : self.guided_attention_loss_num_heads] for x in cross_attentions], dim=1)
input_masks = attention_mask == 1
output_masks = padding_mask[:, :, 0]
if self.reduction_factor > 1:
output_masks = output_masks[:, self.reduction_factor - 1 :: self.reduction_factor]
attn_loss = self.attn_criterion(attn, input_masks, output_masks)
loss += attn_loss
return loss
SPEECHT5_BASE_START_DOCSTRING = r"""
This model inherits from [`PreTrainedModel`]. Check the superclass documentation for the generic methods the
library implements for all its model (such as downloading or saving, resizing the input embeddings, pruning heads
etc.)
This model is also a PyTorch [torch.nn.Module](https://pytorch.org/docs/stable/nn.html#torch.nn.Module) subclass.
Use it as a regular PyTorch Module and refer to the PyTorch documentation for all matter related to general usage
and behavior.
Parameters:
config ([`SpeechT5Config`]):
Model configuration class with all the parameters of the model. Initializing with a config file does not
load the weights associated with the model, only the configuration. Check out the
[`~PreTrainedModel.from_pretrained`] method to load the model weights.
encoder ([`SpeechT5EncoderWithSpeechPrenet`] or [`SpeechT5EncoderWithTextPrenet`] or `None`):
The Transformer encoder module that applies the appropiate speech or text encoder prenet. If `None`,
[`SpeechT5EncoderWithoutPrenet`] will be used and the `input_values` are assumed to be hidden states.
decoder ([`SpeechT5DecoderWithSpeechPrenet`] or [`SpeechT5DecoderWithTextPrenet`] or `None`):
The Transformer decoder module that applies the appropiate speech or text decoder prenet. If `None`,
[`SpeechT5DecoderWithoutPrenet`] will be used and the `decoder_input_values` are assumed to be hidden
states.
"""
SPEECHT5_START_DOCSTRING = r"""
This model inherits from [`PreTrainedModel`]. Check the superclass documentation for the generic methods the
library implements for all its model (such as downloading or saving, resizing the input embeddings, pruning heads
etc.)
This model is also a PyTorch [torch.nn.Module](https://pytorch.org/docs/stable/nn.html#torch.nn.Module) subclass.
Use it as a regular PyTorch Module and refer to the PyTorch documentation for all matter related to general usage
and behavior.
Parameters:
config ([`SpeechT5Config`]):
Model configuration class with all the parameters of the model. Initializing with a config file does not
load the weights associated with the model, only the configuration. Check out the
[`~PreTrainedModel.from_pretrained`] method to load the model weights.
"""
SPEECHT5_INPUTS_DOCSTRING = r"""
Args:
attention_mask (`torch.LongTensor` of shape `(batch_size, sequence_length)`, *optional*):
Mask to avoid performing convolution and attention on padding token indices. Mask values selected in `[0,
1]`:
- 1 for tokens that are **not masked**,
- 0 for tokens that are **masked**.
[What are attention masks?](../glossary#attention-mask)
<Tip warning={true}>
`attention_mask` should only be passed if the corresponding processor has `config.return_attention_mask ==
True`. For all models whose processor has `config.return_attention_mask == False`, `attention_mask` should
**not** be passed to avoid degraded performance when doing batched inference. For such models
`input_values` should simply be padded with 0 and passed without `attention_mask`. Be aware that these
models also yield slightly different results depending on whether `input_values` is padded or not.
</Tip>
decoder_attention_mask (`torch.LongTensor` of shape `(batch_size, target_sequence_length)`, *optional*):
Default behavior: generate a tensor that ignores pad tokens in `decoder_input_values`. Causal mask will
also be used by default.
If you want to change padding behavior, you should read [`SpeechT5Decoder._prepare_decoder_attention_mask`]
and modify to your needs. See diagram 1 in [the paper](https://arxiv.org/abs/1910.13461) for more
information on the default strategy.
head_mask (`torch.FloatTensor` of shape `(encoder_layers, encoder_attention_heads)`, *optional*):
Mask to nullify selected heads of the attention modules in the encoder. Mask values selected in `[0, 1]`:
- 1 indicates the head is **not masked**,
- 0 indicates the head is **masked**.
decoder_head_mask (`torch.FloatTensor` of shape `(decoder_layers, decoder_attention_heads)`, *optional*):
Mask to nullify selected heads of the attention modules in the decoder. Mask values selected in `[0, 1]`:
- 1 indicates the head is **not masked**,
- 0 indicates the head is **masked**.
cross_attn_head_mask (`torch.Tensor` of shape `(decoder_layers, decoder_attention_heads)`, *optional*):
Mask to nullify selected heads of the cross-attention modules. Mask values selected in `[0, 1]`:
- 1 indicates the head is **not masked**,
- 0 indicates the head is **masked**.
encoder_outputs (`tuple(tuple(torch.FloatTensor)`, *optional*):
Tuple consists of (`last_hidden_state`, *optional*: `hidden_states`, *optional*: `attentions`)
`last_hidden_state` of shape `(batch_size, sequence_length, hidden_size)`, *optional*) is a sequence of
hidden-states at the output of the last layer of the encoder. Used in the cross-attention of the decoder.
past_key_values (`tuple(tuple(torch.FloatTensor))`, *optional*, returned when `use_cache=True` is passed or when `config.use_cache=True`):
Tuple of `tuple(torch.FloatTensor)` of length `config.n_layers`, with each tuple having 2 tensors of shape
`(batch_size, num_heads, sequence_length, embed_size_per_head)`) and 2 additional tensors of shape
`(batch_size, num_heads, encoder_sequence_length, embed_size_per_head)`.
Contains pre-computed hidden-states (key and values in the self-attention blocks and in the cross-attention
blocks) that can be used (see `past_key_values` input) to speed up sequential decoding.
If `past_key_values` are used, the user can optionally input only the last `decoder_input_values` (those
that don't have their past key value states given to this model) of shape `(batch_size, 1)` instead of all
`decoder_input_values` of shape `(batch_size, sequence_length)`. decoder_inputs_embeds (`torch.FloatTensor`
of shape `(batch_size, target_sequence_length, hidden_size)`, *optional*): Optionally, instead of passing
`decoder_input_values` you can choose to directly pass an embedded representation. If `past_key_values` is
used, optionally only the last `decoder_inputs_embeds` have to be input (see `past_key_values`). This is
useful if you want more control over how to convert `decoder_input_values` indices into associated vectors
than the model's internal embedding lookup matrix.
use_cache (`bool`, *optional*):
If set to `True`, `past_key_values` key value states are returned and can be used to speed up decoding (see
`past_key_values`).
output_attentions (`bool`, *optional*):
Whether or not to return the attentions tensors of all attention layers. See `attentions` under returned
tensors for more detail.
output_hidden_states (`bool`, *optional*):
Whether or not to return the hidden states of all layers. See `hidden_states` under returned tensors for
more detail.
return_dict (`bool`, *optional*):
Whether or not to return a [`~utils.ModelOutput`] instead of a plain tuple.
"""
@add_start_docstrings(
"The bare SpeechT5 Encoder-Decoder Model outputting raw hidden-states without any specific pre- or post-nets.",
SPEECHT5_BASE_START_DOCSTRING,
)
class SpeechT5Model(SpeechT5PreTrainedModel):
def __init__(
self,
config: SpeechT5Config,
encoder: Optional[nn.Module] = None,
decoder: Optional[nn.Module] = None,
):
super().__init__(config)
self.config = config
self.encoder = SpeechT5EncoderWithoutPrenet(config) if encoder is None else encoder
self.decoder = SpeechT5DecoderWithoutPrenet(config) if decoder is None else decoder
# Initialize weights and apply final processing
self.post_init()
def get_input_embeddings(self):
if isinstance(self.encoder, SpeechT5EncoderWithTextPrenet):
return self.encoder.get_input_embeddings()
if isinstance(self.decoder, SpeechT5DecoderWithTextPrenet):
return self.decoder.get_input_embeddings()
return None
def set_input_embeddings(self, value):
if isinstance(self.encoder, SpeechT5EncoderWithTextPrenet):
self.encoder.set_input_embeddings(value)
if isinstance(self.decoder, SpeechT5DecoderWithTextPrenet):
self.decoder.set_input_embeddings(value)
def get_encoder(self):
return self.encoder
def get_decoder(self):
return self.decoder
def freeze_feature_encoder(self):
"""
Calling this function will disable the gradient computation for the feature encoder so that its parameter will
not be updated during training.
"""
if isinstance(self.encoder, SpeechT5EncoderWithSpeechPrenet):
self.encoder.prenet.freeze_feature_encoder()
@add_start_docstrings_to_model_forward(SPEECHT5_INPUTS_DOCSTRING)
@replace_return_docstrings(output_type=Seq2SeqModelOutput, config_class=_CONFIG_FOR_DOC)
def forward(
self,
input_values: Optional[torch.Tensor] = None,
attention_mask: Optional[torch.LongTensor] = None,
decoder_input_values: Optional[torch.Tensor] = None,
decoder_attention_mask: Optional[torch.LongTensor] = None,
head_mask: Optional[torch.FloatTensor] = None,
decoder_head_mask: Optional[torch.FloatTensor] = None,
cross_attn_head_mask: Optional[torch.Tensor] = None,
encoder_outputs: Optional[Tuple[Tuple[torch.FloatTensor]]] = None,
past_key_values: Optional[Tuple[Tuple[torch.FloatTensor]]] = None,
use_cache: Optional[bool] = None,
speaker_embeddings: Optional[torch.FloatTensor] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[Tuple[torch.FloatTensor], Seq2SeqModelOutput]:
r"""
input_values (`torch.Tensor` of shape `(batch_size, sequence_length)`):
Depending on which encoder is being used, the `input_values` are either: float values of the input raw
speech waveform, or indices of input sequence tokens in the vocabulary, or hidden states.
decoder_input_values (`torch.Tensor` of shape `(batch_size, target_sequence_length)`, *optional*):
Depending on which decoder is being used, the `decoder_input_values` are either: float values of log-mel
filterbank features extracted from the raw speech waveform, or indices of decoder input sequence tokens in
the vocabulary, or hidden states.
speaker_embeddings (`torch.FloatTensor` of shape `(batch_size, config.speaker_embedding_dim)`, *optional*):
Tensor containing the speaker embeddings.
Returns:
"""
output_attentions = output_attentions if output_attentions is not None else self.config.output_attentions
output_hidden_states = (
output_hidden_states if output_hidden_states is not None else self.config.output_hidden_states
)
use_cache = use_cache if use_cache is not None else self.config.use_cache
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
# Encode if needed (training, first prediction pass)
if encoder_outputs is None:
encoder_outputs = self.encoder(
input_values=input_values,
attention_mask=attention_mask,
head_mask=head_mask,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
# If the user passed a tuple for encoder_outputs, we wrap it in a BaseModelOutput when return_dict=True
elif return_dict and not isinstance(encoder_outputs, BaseModelOutput):
encoder_outputs = BaseModelOutput(
last_hidden_state=encoder_outputs[0],
hidden_states=encoder_outputs[1] if len(encoder_outputs) > 1 else None,
attentions=encoder_outputs[2] if len(encoder_outputs) > 2 else None,
)
# downsample encoder attention mask (only for encoders with speech input)
if attention_mask is not None and isinstance(self.encoder, SpeechT5EncoderWithSpeechPrenet):
encoder_attention_mask = self.encoder.prenet._get_feature_vector_attention_mask(
encoder_outputs[0].shape[1], attention_mask
)
else:
encoder_attention_mask = attention_mask
if isinstance(self.decoder, SpeechT5DecoderWithSpeechPrenet):
decoder_args = {"speaker_embeddings": speaker_embeddings}
else:
decoder_args = {}
decoder_outputs = self.decoder(
input_values=decoder_input_values,
attention_mask=decoder_attention_mask,
encoder_hidden_states=encoder_outputs[0],
encoder_attention_mask=encoder_attention_mask,
head_mask=decoder_head_mask,
cross_attn_head_mask=cross_attn_head_mask,
past_key_values=past_key_values,
use_cache=use_cache,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
**decoder_args,
)
if not return_dict:
return decoder_outputs + encoder_outputs
return Seq2SeqModelOutput(
last_hidden_state=decoder_outputs.last_hidden_state,
past_key_values=decoder_outputs.past_key_values,
decoder_hidden_states=decoder_outputs.hidden_states,
decoder_attentions=decoder_outputs.attentions,
cross_attentions=decoder_outputs.cross_attentions,
encoder_last_hidden_state=encoder_outputs.last_hidden_state,
encoder_hidden_states=encoder_outputs.hidden_states,
encoder_attentions=encoder_outputs.attentions,
)
@add_start_docstrings(
"""SpeechT5 Model with a speech encoder and a text decoder.""",
SPEECHT5_START_DOCSTRING,
)
class SpeechT5ForSpeechToText(SpeechT5PreTrainedModel):
_tied_weights_keys = ["text_decoder_postnet.lm_head.weight"]
def __init__(self, config: SpeechT5Config):
super().__init__(config)
if config.vocab_size is None:
raise ValueError(
f"You are trying to instantiate {self.__class__} with a configuration that does not define the"
" vocabulary size of the language model head. Please instantiate the model as follows:"
" `SpeechT5ForSpeechToText.from_pretrained(..., vocab_size=vocab_size)`. or define `vocab_size` of"
" your model's configuration."
)
speech_encoder = SpeechT5EncoderWithSpeechPrenet(config)
text_decoder = SpeechT5DecoderWithTextPrenet(config)
self.speecht5 = SpeechT5Model(config, speech_encoder, text_decoder)
self.text_decoder_postnet = SpeechT5TextDecoderPostnet(config)
# Initialize weights and apply final processing
self.post_init()
def get_encoder(self):
return self.speecht5.get_encoder()
def get_decoder(self):
return self.speecht5.get_decoder()
def freeze_feature_encoder(self):
"""
Calling this function will disable the gradient computation for the feature encoder so that its parameter will
not be updated during training.
"""
self.get_encoder().prenet.freeze_feature_encoder()
def resize_token_embeddings(self, new_num_tokens: int) -> nn.Embedding:
new_embeddings = super().resize_token_embeddings(new_num_tokens)
return new_embeddings
def get_output_embeddings(self):
return self.text_decoder_postnet.get_output_embeddings()
def set_output_embeddings(self, new_embeddings):
self.text_decoder_postnet.set_output_embeddings(new_embeddings)
@add_start_docstrings_to_model_forward(SPEECHT5_INPUTS_DOCSTRING)
@replace_return_docstrings(output_type=Seq2SeqLMOutput, config_class=_CONFIG_FOR_DOC)
def forward(
self,
input_values: Optional[torch.FloatTensor] = None,
attention_mask: Optional[torch.LongTensor] = None,
decoder_input_ids: Optional[torch.LongTensor] = None,
decoder_attention_mask: Optional[torch.LongTensor] = None,
head_mask: Optional[torch.FloatTensor] = None,
decoder_head_mask: Optional[torch.FloatTensor] = None,
cross_attn_head_mask: Optional[torch.Tensor] = None,
encoder_outputs: Optional[Tuple[Tuple[torch.FloatTensor]]] = None,
past_key_values: Optional[Tuple[Tuple[torch.FloatTensor]]] = None,
use_cache: Optional[bool] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
labels: Optional[torch.LongTensor] = None,
) -> Union[Tuple, Seq2SeqLMOutput]:
r"""
input_values (`torch.FloatTensor` of shape `(batch_size, sequence_length)`):
Float values of input raw speech waveform. Values can be obtained by loading a *.flac* or *.wav* audio file
into an array of type `List[float]` or a `numpy.ndarray`, *e.g.* via the soundfile library (*pip install
soundfile*). To prepare the array into `input_values`, the [`SpeechT5Processor`] should be used for padding
and conversion into a tensor of type `torch.FloatTensor`. See [`SpeechT5Processor.__call__`] for details.
decoder_input_ids (`torch.LongTensor` of shape `(batch_size, target_sequence_length)`, *optional*):
Indices of decoder input sequence tokens in the vocabulary.
Indices can be obtained using [`SpeechT5Tokenizer`]. See [`PreTrainedTokenizer.encode`] and
[`PreTrainedTokenizer.__call__`] for details.
[What are decoder input IDs?](../glossary#decoder-input-ids)
SpeechT5 uses the `eos_token_id` as the starting token for `decoder_input_ids` generation. If
`past_key_values` is used, optionally only the last `decoder_input_ids` have to be input (see
`past_key_values`).
labels (`torch.LongTensor` of shape `(batch_size, sequence_length)`, *optional*):
Labels for computing the language modeling loss. Indices should either be in `[0, ..., config.vocab_size]`
or -100 (see `input_ids` docstring). Tokens with indices set to `-100` are ignored (masked), the loss is
only computed for the tokens with labels in `[0, ..., config.vocab_size]`.
Label indices can be obtained using [`SpeechT5Tokenizer`]. See [`PreTrainedTokenizer.encode`] and
[`PreTrainedTokenizer.__call__`] for details.
Returns:
Example:
```python
>>> from transformers import SpeechT5Processor, SpeechT5ForSpeechToText
>>> from datasets import load_dataset
>>> dataset = load_dataset(
... "hf-internal-testing/librispeech_asr_demo", "clean", split="validation"
... ) # doctest: +IGNORE_RESULT
>>> dataset = dataset.sort("id")
>>> sampling_rate = dataset.features["audio"].sampling_rate
>>> processor = SpeechT5Processor.from_pretrained("microsoft/speecht5_asr")
>>> model = SpeechT5ForSpeechToText.from_pretrained("microsoft/speecht5_asr")
>>> # audio file is decoded on the fly
>>> inputs = processor(audio=dataset[0]["audio"]["array"], sampling_rate=sampling_rate, return_tensors="pt")
>>> predicted_ids = model.generate(**inputs, max_length=100)
>>> # transcribe speech
>>> transcription = processor.batch_decode(predicted_ids, skip_special_tokens=True)
>>> transcription[0]
'mister quilter is the apostle of the middle classes and we are glad to welcome his gospel'
```
```python
>>> inputs["labels"] = processor(text_target=dataset[0]["text"], return_tensors="pt").input_ids
>>> # compute loss
>>> loss = model(**inputs).loss
>>> round(loss.item(), 2)
19.68
```
"""
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
if labels is not None:
if decoder_input_ids is None:
decoder_input_ids = shift_tokens_right(
labels, self.config.pad_token_id, self.config.decoder_start_token_id
)
outputs = self.speecht5(
input_values=input_values,
attention_mask=attention_mask,
decoder_input_values=decoder_input_ids,
decoder_attention_mask=decoder_attention_mask,
head_mask=head_mask,
decoder_head_mask=decoder_head_mask,
cross_attn_head_mask=cross_attn_head_mask,
encoder_outputs=encoder_outputs,
past_key_values=past_key_values,
use_cache=use_cache,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=True,
)
logits = self.text_decoder_postnet(outputs[0])
loss = None
if labels is not None:
loss_fct = CrossEntropyLoss()
loss = loss_fct(logits.view(-1, self.config.vocab_size), labels.view(-1))
if not return_dict:
output = (logits,) + outputs[1:]
return ((loss,) + output) if loss is not None else output
return Seq2SeqLMOutput(
loss=loss,
logits=logits,
past_key_values=outputs.past_key_values,
decoder_hidden_states=outputs.decoder_hidden_states,
decoder_attentions=outputs.decoder_attentions,
cross_attentions=outputs.cross_attentions,
encoder_last_hidden_state=outputs.encoder_last_hidden_state,
encoder_hidden_states=outputs.encoder_hidden_states,
encoder_attentions=outputs.encoder_attentions,
)
def prepare_inputs_for_generation(
self,
decoder_input_ids,
past_key_values=None,
attention_mask=None,
head_mask=None,
decoder_head_mask=None,
cross_attn_head_mask=None,
use_cache=None,
encoder_outputs=None,
**kwargs,
):
# cut decoder_input_ids if past is used
if past_key_values is not None:
decoder_input_ids = decoder_input_ids[:, -1:]
return {
"encoder_outputs": encoder_outputs,
"past_key_values": past_key_values,
"decoder_input_ids": decoder_input_ids,
"attention_mask": attention_mask,
"head_mask": head_mask,
"decoder_head_mask": decoder_head_mask,
"cross_attn_head_mask": cross_attn_head_mask,
"use_cache": use_cache, # change this to avoid caching (presumably for debugging)
}
@staticmethod
def _reorder_cache(past_key_values, beam_idx):
reordered_past = ()
for layer_past in past_key_values:
reordered_past += (tuple(past_state.index_select(0, beam_idx) for past_state in layer_past),)
return reordered_past
def _generate_speech(
model: SpeechT5PreTrainedModel,
input_values: torch.FloatTensor,
speaker_embeddings: Optional[torch.FloatTensor] = None,
threshold: float = 0.5,
minlenratio: float = 0.0,
maxlenratio: float = 20.0,
vocoder: Optional[nn.Module] = None,
output_cross_attentions: bool = False,
) -> Union[torch.FloatTensor, Tuple[torch.FloatTensor, torch.FloatTensor]]:
encoder_attention_mask = torch.ones_like(input_values)
encoder_out = model.speecht5.encoder(
input_values=input_values,
attention_mask=encoder_attention_mask,
return_dict=True,
)
encoder_last_hidden_state = encoder_out.last_hidden_state
# downsample encoder attention mask
if isinstance(model.speecht5.encoder, SpeechT5EncoderWithSpeechPrenet):
encoder_attention_mask = model.speecht5.encoder.prenet._get_feature_vector_attention_mask(
encoder_out[0].shape[1], encoder_attention_mask
)
maxlen = int(encoder_last_hidden_state.size(1) * maxlenratio / model.config.reduction_factor)
minlen = int(encoder_last_hidden_state.size(1) * minlenratio / model.config.reduction_factor)
# Start the output sequence with a mel spectrum that is all zeros.
output_sequence = encoder_last_hidden_state.new_zeros(1, 1, model.config.num_mel_bins)
spectrogram = []
cross_attentions = []
past_key_values = None
idx = 0
while True:
idx += 1
# Run the decoder prenet on the entire output sequence.
decoder_hidden_states = model.speecht5.decoder.prenet(output_sequence, speaker_embeddings)
# Run the decoder layers on the last element of the prenet output.
decoder_out = model.speecht5.decoder.wrapped_decoder(
hidden_states=decoder_hidden_states[:, -1:],
attention_mask=None,
encoder_hidden_states=encoder_last_hidden_state,
encoder_attention_mask=encoder_attention_mask,
past_key_values=past_key_values,
use_cache=True,
output_attentions=output_cross_attentions,
return_dict=True,
)
if output_cross_attentions:
cross_attentions.append(torch.cat(decoder_out.cross_attentions, dim=0))
last_decoder_output = decoder_out.last_hidden_state[0, -1]
past_key_values = decoder_out.past_key_values
# Predict the new mel spectrum for this step in the sequence.
spectrum = model.speech_decoder_postnet.feat_out(last_decoder_output)
spectrum = spectrum.view(model.config.reduction_factor, model.config.num_mel_bins)
spectrogram.append(spectrum)
# Extend the output sequence with the new mel spectrum.
output_sequence = torch.cat((output_sequence, spectrum[-1].view(1, 1, model.config.num_mel_bins)), dim=1)
# Predict the probability that this is the stop token.
prob = torch.sigmoid(model.speech_decoder_postnet.prob_out(last_decoder_output))
# Finished when stop token or maximum length is reached.
if idx >= minlen and (int(sum(prob >= threshold)) > 0 or idx >= maxlen):
spectrogram = torch.cat(spectrogram, dim=0).unsqueeze(0)
spectrogram = model.speech_decoder_postnet.postnet(spectrogram)
spectrogram = spectrogram.squeeze(0)
break
if vocoder is not None:
outputs = vocoder(spectrogram)
else:
outputs = spectrogram
if output_cross_attentions:
cross_attentions = torch.cat(cross_attentions, dim=2)
outputs = (outputs, cross_attentions)
return outputs
@add_start_docstrings(
"""SpeechT5 Model with a text encoder and a speech decoder.""",
SPEECHT5_START_DOCSTRING,
)
class SpeechT5ForTextToSpeech(SpeechT5PreTrainedModel):
main_input_name = "input_ids"
def __init__(self, config: SpeechT5Config):
super().__init__(config)
if config.vocab_size is None:
raise ValueError(
f"You are trying to instantiate {self.__class__} with a configuration that does not define the"
" vocabulary size of the language model head. Please instantiate the model as follows:"
" `SpeechT5ForTextToSpeech.from_pretrained(..., vocab_size=vocab_size)`. or define `vocab_size` of"
" your model's configuration."
)
text_encoder = SpeechT5EncoderWithTextPrenet(config)
speech_decoder = SpeechT5DecoderWithSpeechPrenet(config)
self.speecht5 = SpeechT5Model(config, text_encoder, speech_decoder)
self.speech_decoder_postnet = SpeechT5SpeechDecoderPostnet(config)
# Initialize weights and apply final processing
self.post_init()
def get_encoder(self):
return self.speecht5.get_encoder()
def get_decoder(self):
return self.speecht5.get_decoder()
@add_start_docstrings_to_model_forward(SPEECHT5_INPUTS_DOCSTRING)
@replace_return_docstrings(output_type=Seq2SeqSpectrogramOutput, config_class=_CONFIG_FOR_DOC)
def forward(
self,
input_ids: Optional[torch.LongTensor] = None,
attention_mask: Optional[torch.LongTensor] = None,
decoder_input_values: Optional[torch.FloatTensor] = None,
decoder_attention_mask: Optional[torch.LongTensor] = None,
head_mask: Optional[torch.FloatTensor] = None,
decoder_head_mask: Optional[torch.FloatTensor] = None,
cross_attn_head_mask: Optional[torch.Tensor] = None,
encoder_outputs: Optional[Tuple[Tuple[torch.FloatTensor]]] = None,
past_key_values: Optional[Tuple[Tuple[torch.FloatTensor]]] = None,
use_cache: Optional[bool] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
speaker_embeddings: Optional[torch.FloatTensor] = None,
labels: Optional[torch.FloatTensor] = None,
stop_labels: Optional[torch.Tensor] = None,
) -> Union[Tuple, Seq2SeqSpectrogramOutput]:
r"""
input_ids (`torch.LongTensor` of shape `(batch_size, sequence_length)`):
Indices of input sequence tokens in the vocabulary. The `batch_size` should be 1 currently.
Indices can be obtained using [`SpeechT5Tokenizer`]. See [`~PreTrainedTokenizer.encode`] and
[`~PreTrainedTokenizer.__call__`] for details.
[What are input IDs?](../glossary#input-ids)
decoder_input_values (`torch.FloatTensor` of shape `(batch_size, sequence_length, config.num_mel_bins)`):
Float values of input mel spectrogram.
SpeechT5 uses an all-zero spectrum as the starting token for `decoder_input_values` generation. If
`past_key_values` is used, optionally only the last `decoder_input_values` have to be input (see
`past_key_values`).
speaker_embeddings (`torch.FloatTensor` of shape `(batch_size, config.speaker_embedding_dim)`, *optional*):
Tensor containing the speaker embeddings.
labels (`torch.FloatTensor` of shape `(batch_size, sequence_length, config.num_mel_bins)`, *optional*):
Float values of target mel spectrogram. Timesteps set to `-100.0` are ignored (masked) for the loss
computation. Spectrograms can be obtained using [`SpeechT5Processor`]. See [`SpeechT5Processor.__call__`]
for details.
Returns:
Example:
```python
>>> from transformers import SpeechT5Processor, SpeechT5ForTextToSpeech, SpeechT5HifiGan, set_seed
>>> import torch
>>> processor = SpeechT5Processor.from_pretrained("microsoft/speecht5_tts")
>>> model = SpeechT5ForTextToSpeech.from_pretrained("microsoft/speecht5_tts")
>>> vocoder = SpeechT5HifiGan.from_pretrained("microsoft/speecht5_hifigan")
>>> inputs = processor(text="Hello, my dog is cute", return_tensors="pt")
>>> speaker_embeddings = torch.zeros((1, 512)) # or load xvectors from a file
>>> set_seed(555) # make deterministic
>>> # generate speech
>>> speech = model.generate_speech(inputs["input_ids"], speaker_embeddings, vocoder=vocoder)
>>> speech.shape
torch.Size([15872])
```
"""
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
if stop_labels is not None:
warnings.warn(
"The argument `stop_labels` is deprecated and will be removed in version 4.30.0 of Transformers",
FutureWarning,
)
if labels is not None:
if decoder_input_values is None:
decoder_input_values = shift_spectrograms_right(labels, self.config.reduction_factor)
if self.config.use_guided_attention_loss:
output_attentions = True
outputs = self.speecht5(
input_values=input_ids,
attention_mask=attention_mask,
decoder_input_values=decoder_input_values,
decoder_attention_mask=decoder_attention_mask,
head_mask=head_mask,
decoder_head_mask=decoder_head_mask,
cross_attn_head_mask=cross_attn_head_mask,
encoder_outputs=encoder_outputs,
past_key_values=past_key_values,
use_cache=use_cache,
speaker_embeddings=speaker_embeddings,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=True,
)
outputs_before_postnet, outputs_after_postnet, logits = self.speech_decoder_postnet(outputs[0])
loss = None
if labels is not None:
criterion = SpeechT5SpectrogramLoss(self.config)
loss = criterion(
attention_mask,
outputs_before_postnet,
outputs_after_postnet,
logits,
labels,
outputs.cross_attentions,
)
if not return_dict:
output = (outputs_after_postnet,) + outputs[1:]
return ((loss,) + output) if loss is not None else output
return Seq2SeqSpectrogramOutput(
loss=loss,
spectrogram=outputs_after_postnet,
past_key_values=outputs.past_key_values,
decoder_hidden_states=outputs.decoder_hidden_states,
decoder_attentions=outputs.decoder_attentions,
cross_attentions=outputs.cross_attentions,
encoder_last_hidden_state=outputs.encoder_last_hidden_state,
encoder_hidden_states=outputs.encoder_hidden_states,
encoder_attentions=outputs.encoder_attentions,
)
@torch.no_grad()
def generate_speech(
self,
input_ids: torch.LongTensor,
speaker_embeddings: Optional[torch.FloatTensor] = None,
threshold: float = 0.5,
minlenratio: float = 0.0,
maxlenratio: float = 20.0,
vocoder: Optional[nn.Module] = None,
output_cross_attentions: bool = False,
) -> Union[torch.FloatTensor, Tuple[torch.FloatTensor, torch.FloatTensor]]:
r"""
Converts a sequence of input tokens into a sequence of mel spectrograms, which are subsequently turned into a
speech waveform using a vocoder.
Args:
input_ids (`torch.LongTensor` of shape `(batch_size, sequence_length)`):
Indices of input sequence tokens in the vocabulary. The `batch_size` should be 1 currently.
Indices can be obtained using [`SpeechT5Tokenizer`]. See [`~PreTrainedTokenizer.encode`] and
[`~PreTrainedTokenizer.__call__`] for details.
[What are input IDs?](../glossary#input-ids)
speaker_embeddings (`torch.FloatTensor` of shape `(batch_size, config.speaker_embedding_dim)`, *optional*):
Tensor containing the speaker embeddings.
threshold (`float`, *optional*, defaults to 0.5):
The generated sequence ends when the predicted stop token probability exceeds this value.
minlenratio (`float`, *optional*, defaults to 0.0):
Used to calculate the minimum required length for the output sequence.
maxlenratio (`float`, *optional*, defaults to 20.0):
Used to calculate the maximum allowed length for the output sequence.
vocoder (`nn.Module`, *optional*, defaults to `None`):
The vocoder that converts the mel spectrogram into a speech waveform. If `None`, the output is the mel
spectrogram.
output_cross_attentions (`bool`, *optional*, defaults to `False`):
Whether or not to return the attentions tensors of the decoder's cross-attention layers.
Returns:
`tuple(torch.FloatTensor)` comprising various elements depending on the inputs:
- **spectrogram** (*optional*, returned when no `vocoder` is provided) `torch.FloatTensor` of shape
`(output_sequence_length, config.num_mel_bins)` -- The predicted log-mel spectrogram.
- **waveform** (*optional*, returned when a `vocoder` is provided) `torch.FloatTensor` of shape
`(num_frames,)` -- The predicted speech waveform.
- **cross_attentions** (*optional*, returned when `output_cross_attentions` is `True`) `torch.FloatTensor`
of shape `(config.decoder_layers, config.decoder_attention_heads, output_sequence_length,
input_sequence_length)` -- The outputs of the decoder's cross-attention layers.
"""
return _generate_speech(
self,
input_ids,
speaker_embeddings,
threshold,
minlenratio,
maxlenratio,
vocoder,
output_cross_attentions,
)
@add_start_docstrings(
"""SpeechT5 Model with a speech encoder and a speech decoder.""",
SPEECHT5_START_DOCSTRING,
)
class SpeechT5ForSpeechToSpeech(SpeechT5PreTrainedModel):
def __init__(self, config: SpeechT5Config):
super().__init__(config)
speech_encoder = SpeechT5EncoderWithSpeechPrenet(config)
speech_decoder = SpeechT5DecoderWithSpeechPrenet(config)
self.speecht5 = SpeechT5Model(config, speech_encoder, speech_decoder)
self.speech_decoder_postnet = SpeechT5SpeechDecoderPostnet(config)
# Initialize weights and apply final processing
self.post_init()
def get_encoder(self):
return self.speecht5.get_encoder()
def get_decoder(self):
return self.speecht5.get_decoder()
def freeze_feature_encoder(self):
"""
Calling this function will disable the gradient computation for the feature encoder so that its parameter will
not be updated during training.
"""
self.get_encoder().prenet.freeze_feature_encoder()
@add_start_docstrings_to_model_forward(SPEECHT5_INPUTS_DOCSTRING)
@replace_return_docstrings(output_type=Seq2SeqSpectrogramOutput, config_class=_CONFIG_FOR_DOC)
def forward(
self,
input_values: Optional[torch.FloatTensor] = None,
attention_mask: Optional[torch.LongTensor] = None,
decoder_input_values: Optional[torch.FloatTensor] = None,
decoder_attention_mask: Optional[torch.LongTensor] = None,
head_mask: Optional[torch.FloatTensor] = None,
decoder_head_mask: Optional[torch.FloatTensor] = None,
cross_attn_head_mask: Optional[torch.Tensor] = None,
encoder_outputs: Optional[Tuple[Tuple[torch.FloatTensor]]] = None,
past_key_values: Optional[Tuple[Tuple[torch.FloatTensor]]] = None,
use_cache: Optional[bool] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
speaker_embeddings: Optional[torch.FloatTensor] = None,
labels: Optional[torch.FloatTensor] = None,
stop_labels: Optional[torch.Tensor] = None,
) -> Union[Tuple, Seq2SeqSpectrogramOutput]:
r"""
input_values (`torch.FloatTensor` of shape `(batch_size, sequence_length)`):
Float values of input raw speech waveform. Values can be obtained by loading a *.flac* or *.wav* audio file
into an array of type `List[float]` or a `numpy.ndarray`, *e.g.* via the soundfile library (*pip install
soundfile*). To prepare the array into `input_values`, the [`SpeechT5Processor`] should be used for padding
and conversion into a tensor of type `torch.FloatTensor`. See [`SpeechT5Processor.__call__`] for details.
decoder_input_values (`torch.FloatTensor` of shape `(batch_size, sequence_length, config.num_mel_bins)`):
Float values of input mel spectrogram.
SpeechT5 uses an all-zero spectrum as the starting token for `decoder_input_values` generation. If
`past_key_values` is used, optionally only the last `decoder_input_values` have to be input (see
`past_key_values`).
speaker_embeddings (`torch.FloatTensor` of shape `(batch_size, config.speaker_embedding_dim)`, *optional*):
Tensor containing the speaker embeddings.
labels (`torch.FloatTensor` of shape `(batch_size, sequence_length, config.num_mel_bins)`, *optional*):
Float values of target mel spectrogram. Spectrograms can be obtained using [`SpeechT5Processor`]. See
[`SpeechT5Processor.__call__`] for details.
Returns:
Example:
```python
>>> from transformers import SpeechT5Processor, SpeechT5ForSpeechToSpeech, SpeechT5HifiGan, set_seed
>>> from datasets import load_dataset
>>> import torch
>>> dataset = load_dataset(
... "hf-internal-testing/librispeech_asr_demo", "clean", split="validation"
... ) # doctest: +IGNORE_RESULT
>>> dataset = dataset.sort("id")
>>> sampling_rate = dataset.features["audio"].sampling_rate
>>> processor = SpeechT5Processor.from_pretrained("microsoft/speecht5_vc")
>>> model = SpeechT5ForSpeechToSpeech.from_pretrained("microsoft/speecht5_vc")
>>> vocoder = SpeechT5HifiGan.from_pretrained("microsoft/speecht5_hifigan")
>>> # audio file is decoded on the fly
>>> inputs = processor(audio=dataset[0]["audio"]["array"], sampling_rate=sampling_rate, return_tensors="pt")
>>> speaker_embeddings = torch.zeros((1, 512)) # or load xvectors from a file
>>> set_seed(555) # make deterministic
>>> # generate speech
>>> speech = model.generate_speech(inputs["input_values"], speaker_embeddings, vocoder=vocoder)
>>> speech.shape
torch.Size([77824])
```
"""
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
if stop_labels is not None:
warnings.warn(
"The argument `stop_labels` is deprecated and will be removed in version 4.30.0 of Transformers",
FutureWarning,
)
if labels is not None:
if decoder_input_values is None:
decoder_input_values = shift_spectrograms_right(labels, self.config.reduction_factor)
outputs = self.speecht5(
input_values=input_values,
attention_mask=attention_mask,
decoder_input_values=decoder_input_values,
decoder_attention_mask=decoder_attention_mask,
head_mask=head_mask,
decoder_head_mask=decoder_head_mask,
cross_attn_head_mask=cross_attn_head_mask,
encoder_outputs=encoder_outputs,
past_key_values=past_key_values,
use_cache=use_cache,
speaker_embeddings=speaker_embeddings,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=True,
)
_, spectrogram, logits = self.speech_decoder_postnet(outputs[0])
loss = None
if not return_dict:
output = (spectrogram,) + outputs[1:]
return ((loss,) + output) if loss is not None else output
return Seq2SeqSpectrogramOutput(
loss=loss,
spectrogram=spectrogram,
past_key_values=outputs.past_key_values,
decoder_hidden_states=outputs.decoder_hidden_states,
decoder_attentions=outputs.decoder_attentions,
cross_attentions=outputs.cross_attentions,
encoder_last_hidden_state=outputs.encoder_last_hidden_state,
encoder_hidden_states=outputs.encoder_hidden_states,
encoder_attentions=outputs.encoder_attentions,
)
@torch.no_grad()
def generate_speech(
self,
input_values: torch.FloatTensor,
speaker_embeddings: Optional[torch.FloatTensor] = None,
threshold: float = 0.5,
minlenratio: float = 0.0,
maxlenratio: float = 20.0,
vocoder: Optional[nn.Module] = None,
output_cross_attentions: bool = False,
) -> torch.FloatTensor:
r"""
Converts a raw speech waveform into a sequence of mel spectrograms, which are subsequently turned back into a
speech waveform using a vocoder.
Args:
input_values (`torch.FloatTensor` of shape `(batch_size, sequence_length)`):
Float values of input raw speech waveform. The `batch_size` should be 1 currently.
Values can be obtained by loading a *.flac* or *.wav* audio file into an array of type `List[float]` or
a `numpy.ndarray`, *e.g.* via the soundfile library (*pip install soundfile*). To prepare the array
into `input_values`, the [`SpeechT5Processor`] should be used for padding and conversion into a tensor
of type `torch.FloatTensor`. See [`SpeechT5Processor.__call__`] for details.
speaker_embeddings (`torch.FloatTensor` of shape `(batch_size, config.speaker_embedding_dim)`, *optional*):
Tensor containing the speaker embeddings.
threshold (`float`, *optional*, defaults to 0.5):
The generated sequence ends when the predicted stop token probability exceeds this value.
minlenratio (`float`, *optional*, defaults to 0.0):
Used to calculate the minimum required length for the output sequence.
maxlenratio (`float`, *optional*, defaults to 20.0):
Used to calculate the maximum allowed length for the output sequence.
vocoder (`nn.Module`, *optional*, defaults to `None`):
The vocoder that converts the mel spectrogram into a speech waveform. If `None`, the output is the mel
spectrogram.
output_cross_attentions (`bool`, *optional*, defaults to `False`):
Whether or not to return the attentions tensors of the decoder's cross-attention layers.
Returns:
`tuple(torch.FloatTensor)` comprising various elements depending on the inputs:
- **spectrogram** (*optional*, returned when no `vocoder` is provided) `torch.FloatTensor` of shape
`(output_sequence_length, config.num_mel_bins)` -- The predicted log-mel spectrogram.
- **waveform** (*optional*, returned when a `vocoder` is provided) `torch.FloatTensor` of shape
`(num_frames,)` -- The predicted speech waveform.
- **cross_attentions** (*optional*, returned when `output_cross_attentions` is `True`) `torch.FloatTensor`
of shape `(config.decoder_layers, config.decoder_attention_heads, output_sequence_length,
input_sequence_length)` -- The outputs of the decoder's cross-attention layers.
"""
if speaker_embeddings is None:
speaker_embeddings = torch.zeros((1, 512), device=input_values.device)
return _generate_speech(
self,
input_values,
speaker_embeddings,
threshold,
minlenratio,
maxlenratio,
vocoder,
output_cross_attentions,
)
HIFIGAN_START_DOCSTRING = r"""
This model inherits from [`PreTrainedModel`]. Check the superclass documentation for the generic methods the
library implements for all its model (such as downloading or saving, resizing the input embeddings, pruning heads
etc.)
This model is also a PyTorch [torch.nn.Module](https://pytorch.org/docs/stable/nn.html#torch.nn.Module) subclass.
Use it as a regular PyTorch Module and refer to the PyTorch documentation for all matter related to general usage
and behavior.
Parameters:
config ([`SpeechT5HifiGanConfig`]):
Model configuration class with all the parameters of the model. Initializing with a config file does not
load the weights associated with the model, only the configuration. Check out the
[`~PreTrainedModel.from_pretrained`] method to load the model weights.
"""
class HifiGanResidualBlock(nn.Module):
def __init__(self, channels, kernel_size=3, dilation=(1, 3, 5), leaky_relu_slope=0.1):
super().__init__()
self.leaky_relu_slope = leaky_relu_slope
self.convs1 = nn.ModuleList(
[
nn.Conv1d(
channels,
channels,
kernel_size,
stride=1,
dilation=dilation[i],
padding=self.get_padding(kernel_size, dilation[i]),
)
for i in range(len(dilation))
]
)
self.convs2 = nn.ModuleList(
[
nn.Conv1d(
channels,
channels,
kernel_size,
stride=1,
dilation=1,
padding=self.get_padding(kernel_size, 1),
)
for _ in range(len(dilation))
]
)
def get_padding(self, kernel_size, dilation=1):
return (kernel_size * dilation - dilation) // 2
def apply_weight_norm(self):
for layer in self.convs1:
nn.utils.weight_norm(layer)
for layer in self.convs2:
nn.utils.weight_norm(layer)
def remove_weight_norm(self):
for layer in self.convs1:
nn.utils.remove_weight_norm(layer)
for layer in self.convs2:
nn.utils.remove_weight_norm(layer)
def forward(self, hidden_states):
for conv1, conv2 in zip(self.convs1, self.convs2):
residual = hidden_states
hidden_states = nn.functional.leaky_relu(hidden_states, self.leaky_relu_slope)
hidden_states = conv1(hidden_states)
hidden_states = nn.functional.leaky_relu(hidden_states, self.leaky_relu_slope)
hidden_states = conv2(hidden_states)
hidden_states = hidden_states + residual
return hidden_states
@add_start_docstrings(
"""HiFi-GAN vocoder.""",
HIFIGAN_START_DOCSTRING,
)
class SpeechT5HifiGan(PreTrainedModel):
config_class = SpeechT5HifiGanConfig
main_input_name = "spectrogram"
def __init__(self, config: SpeechT5HifiGanConfig):
super().__init__(config)
self.num_kernels = len(config.resblock_kernel_sizes)
self.num_upsamples = len(config.upsample_rates)
self.conv_pre = nn.Conv1d(
config.model_in_dim,
config.upsample_initial_channel,
kernel_size=7,
stride=1,
padding=3,
)
self.upsampler = nn.ModuleList()
for i, (upsample_rate, kernel_size) in enumerate(zip(config.upsample_rates, config.upsample_kernel_sizes)):
self.upsampler.append(
nn.ConvTranspose1d(
config.upsample_initial_channel // (2**i),
config.upsample_initial_channel // (2 ** (i + 1)),
kernel_size=kernel_size,
stride=upsample_rate,
padding=(kernel_size - upsample_rate) // 2,
)
)
self.resblocks = nn.ModuleList()
for i in range(len(self.upsampler)):
channels = config.upsample_initial_channel // (2 ** (i + 1))
for kernel_size, dilation in zip(config.resblock_kernel_sizes, config.resblock_dilation_sizes):
self.resblocks.append(HifiGanResidualBlock(channels, kernel_size, dilation, config.leaky_relu_slope))
self.conv_post = nn.Conv1d(channels, 1, kernel_size=7, stride=1, padding=3)
self.register_buffer("mean", torch.zeros(config.model_in_dim))
self.register_buffer("scale", torch.ones(config.model_in_dim))
# Initialize weights and apply final processing
self.post_init()
def _init_weights(self, module):
"""Initialize the weights."""
if isinstance(module, (nn.Linear, nn.Conv1d)):
module.weight.data.normal_(mean=0.0, std=self.config.initializer_range)
if module.bias is not None:
module.bias.data.zero_()
def apply_weight_norm(self):
nn.utils.weight_norm(self.conv_pre)
for layer in self.upsampler:
nn.utils.weight_norm(layer)
for layer in self.resblocks:
layer.apply_weight_norm()
nn.utils.weight_norm(self.conv_post)
def remove_weight_norm(self):
nn.utils.remove_weight_norm(self.conv_pre)
for layer in self.upsampler:
nn.utils.remove_weight_norm(layer)
for layer in self.resblocks:
layer.remove_weight_norm()
nn.utils.remove_weight_norm(self.conv_post)
def forward(self, spectrogram: torch.FloatTensor) -> torch.FloatTensor:
r"""
Converts a log-mel spectrogram into a speech waveform. Passing a batch of log-mel spectrograms returns a batch
of speech waveforms. Passing a single, un-batched log-mel spectrogram returns a single, un-batched speech
waveform.
Args:
spectrogram (`torch.FloatTensor`):
Tensor containing the log-mel spectrograms. Can be batched and of shape `(batch_size, sequence_length,
config.model_in_dim)`, or un-batched and of shape `(sequence_length, config.model_in_dim)`.
Returns:
`torch.FloatTensor`: Tensor containing the speech waveform. If the input spectrogram is batched, will be of
shape `(batch_size, num_frames,)`. If un-batched, will be of shape `(num_frames,)`.
"""
if self.config.normalize_before:
spectrogram = (spectrogram - self.mean) / self.scale
is_batched = spectrogram.dim() == 3
if not is_batched:
spectrogram = spectrogram.unsqueeze(0)
hidden_states = spectrogram.transpose(2, 1)
hidden_states = self.conv_pre(hidden_states)
for i in range(self.num_upsamples):
hidden_states = nn.functional.leaky_relu(hidden_states, self.config.leaky_relu_slope)
hidden_states = self.upsampler[i](hidden_states)
res_state = self.resblocks[i * self.num_kernels](hidden_states)
for j in range(1, self.num_kernels):
res_state += self.resblocks[i * self.num_kernels + j](hidden_states)
hidden_states = res_state / self.num_kernels
hidden_states = nn.functional.leaky_relu(hidden_states)
hidden_states = self.conv_post(hidden_states)
hidden_states = torch.tanh(hidden_states)
if not is_batched:
# remove batch dim and collapse tensor to 1-d audio waveform
waveform = hidden_states.squeeze(0).transpose(1, 0).view(-1)
else:
# remove seq-len dim since this collapses to 1
waveform = hidden_states.squeeze(1)
return waveform
| 144,021 | 43.355405 | 150 | py |
transformers | transformers-main/src/transformers/models/speecht5/convert_hifigan.py | # coding=utf-8
# Copyright 2023 The HuggingFace Inc. team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
"""Convert SpeechT5 HiFi-GAN checkpoint."""
import argparse
import numpy as np
import torch
from transformers import SpeechT5HifiGan, SpeechT5HifiGanConfig, logging
logging.set_verbosity_info()
logger = logging.get_logger("transformers.models.speecht5")
def load_weights(checkpoint, hf_model, config):
hf_model.apply_weight_norm()
hf_model.conv_pre.weight_g.data = checkpoint["input_conv.weight_g"]
hf_model.conv_pre.weight_v.data = checkpoint["input_conv.weight_v"]
hf_model.conv_pre.bias.data = checkpoint["input_conv.bias"]
for i in range(len(config.upsample_rates)):
hf_model.upsampler[i].weight_g.data = checkpoint[f"upsamples.{i}.1.weight_g"]
hf_model.upsampler[i].weight_v.data = checkpoint[f"upsamples.{i}.1.weight_v"]
hf_model.upsampler[i].bias.data = checkpoint[f"upsamples.{i}.1.bias"]
for i in range(len(config.upsample_rates) * len(config.resblock_kernel_sizes)):
for j in range(len(config.resblock_dilation_sizes)):
hf_model.resblocks[i].convs1[j].weight_g.data = checkpoint[f"blocks.{i}.convs1.{j}.1.weight_g"]
hf_model.resblocks[i].convs1[j].weight_v.data = checkpoint[f"blocks.{i}.convs1.{j}.1.weight_v"]
hf_model.resblocks[i].convs1[j].bias.data = checkpoint[f"blocks.{i}.convs1.{j}.1.bias"]
hf_model.resblocks[i].convs2[j].weight_g.data = checkpoint[f"blocks.{i}.convs2.{j}.1.weight_g"]
hf_model.resblocks[i].convs2[j].weight_v.data = checkpoint[f"blocks.{i}.convs2.{j}.1.weight_v"]
hf_model.resblocks[i].convs2[j].bias.data = checkpoint[f"blocks.{i}.convs2.{j}.1.bias"]
hf_model.conv_post.weight_g.data = checkpoint["output_conv.1.weight_g"]
hf_model.conv_post.weight_v.data = checkpoint["output_conv.1.weight_v"]
hf_model.conv_post.bias.data = checkpoint["output_conv.1.bias"]
hf_model.remove_weight_norm()
@torch.no_grad()
def convert_hifigan_checkpoint(
checkpoint_path,
stats_path,
pytorch_dump_folder_path,
config_path=None,
repo_id=None,
):
if config_path is not None:
config = SpeechT5HifiGanConfig.from_pretrained(config_path)
else:
config = SpeechT5HifiGanConfig()
model = SpeechT5HifiGan(config)
orig_checkpoint = torch.load(checkpoint_path)
load_weights(orig_checkpoint["model"]["generator"], model, config)
stats = np.load(stats_path)
mean = stats[0].reshape(-1)
scale = stats[1].reshape(-1)
model.mean = torch.from_numpy(mean).float()
model.scale = torch.from_numpy(scale).float()
model.save_pretrained(pytorch_dump_folder_path)
if repo_id:
print("Pushing to the hub...")
model.push_to_hub(repo_id)
if __name__ == "__main__":
parser = argparse.ArgumentParser()
parser.add_argument("--checkpoint_path", required=True, default=None, type=str, help="Path to original checkpoint")
parser.add_argument("--stats_path", required=True, default=None, type=str, help="Path to stats.npy file")
parser.add_argument("--config_path", default=None, type=str, help="Path to hf config.json of model to convert")
parser.add_argument(
"--pytorch_dump_folder_path", required=True, default=None, type=str, help="Path to the output PyTorch model."
)
parser.add_argument(
"--push_to_hub", default=None, type=str, help="Where to upload the converted model on the 🤗 hub."
)
args = parser.parse_args()
convert_hifigan_checkpoint(
args.checkpoint_path,
args.stats_path,
args.pytorch_dump_folder_path,
args.config_path,
args.push_to_hub,
)
| 4,238 | 37.889908 | 119 | py |
transformers | transformers-main/src/transformers/models/speecht5/__init__.py | # Copyright 2023 The HuggingFace Team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
from typing import TYPE_CHECKING
from ...utils import (
OptionalDependencyNotAvailable,
_LazyModule,
is_sentencepiece_available,
is_torch_available,
)
_import_structure = {
"configuration_speecht5": [
"SPEECHT5_PRETRAINED_CONFIG_ARCHIVE_MAP",
"SPEECHT5_PRETRAINED_HIFIGAN_CONFIG_ARCHIVE_MAP",
"SpeechT5Config",
"SpeechT5HifiGanConfig",
],
"feature_extraction_speecht5": ["SpeechT5FeatureExtractor"],
"processing_speecht5": ["SpeechT5Processor"],
}
try:
if not is_sentencepiece_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
_import_structure["tokenization_speecht5"] = ["SpeechT5Tokenizer"]
try:
if not is_torch_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
_import_structure["modeling_speecht5"] = [
"SPEECHT5_PRETRAINED_MODEL_ARCHIVE_LIST",
"SpeechT5ForSpeechToText",
"SpeechT5ForSpeechToSpeech",
"SpeechT5ForTextToSpeech",
"SpeechT5Model",
"SpeechT5PreTrainedModel",
"SpeechT5HifiGan",
]
if TYPE_CHECKING:
from .configuration_speecht5 import (
SPEECHT5_PRETRAINED_CONFIG_ARCHIVE_MAP,
SPEECHT5_PRETRAINED_HIFIGAN_CONFIG_ARCHIVE_MAP,
SpeechT5Config,
SpeechT5HifiGanConfig,
)
from .feature_extraction_speecht5 import SpeechT5FeatureExtractor
from .processing_speecht5 import SpeechT5Processor
try:
if not is_sentencepiece_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
from .tokenization_speecht5 import SpeechT5Tokenizer
try:
if not is_torch_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
from .modeling_speecht5 import (
SPEECHT5_PRETRAINED_MODEL_ARCHIVE_LIST,
SpeechT5ForSpeechToSpeech,
SpeechT5ForSpeechToText,
SpeechT5ForTextToSpeech,
SpeechT5HifiGan,
SpeechT5Model,
SpeechT5PreTrainedModel,
)
else:
import sys
sys.modules[__name__] = _LazyModule(__name__, globals()["__file__"], _import_structure, module_spec=__spec__)
| 2,971 | 29.639175 | 113 | py |
transformers | transformers-main/src/transformers/models/speecht5/feature_extraction_speecht5.py | # coding=utf-8
# Copyright 2023 The HuggingFace Inc. team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
"""Feature extractor class for SpeechT5."""
import warnings
from typing import Any, Dict, List, Optional, Union
import numpy as np
from ...audio_utils import mel_filter_bank, optimal_fft_length, spectrogram, window_function
from ...feature_extraction_sequence_utils import SequenceFeatureExtractor
from ...feature_extraction_utils import BatchFeature
from ...utils import PaddingStrategy, TensorType, logging
logger = logging.get_logger(__name__)
class SpeechT5FeatureExtractor(SequenceFeatureExtractor):
r"""
Constructs a SpeechT5 feature extractor.
This class can pre-process a raw speech signal by (optionally) normalizing to zero-mean unit-variance, for use by
the SpeechT5 speech encoder prenet.
This class can also extract log-mel filter bank features from raw speech, for use by the SpeechT5 speech decoder
prenet.
This feature extractor inherits from [`~feature_extraction_sequence_utils.SequenceFeatureExtractor`] which contains
most of the main methods. Users should refer to this superclass for more information regarding those methods.
Args:
feature_size (`int`, *optional*, defaults to 1):
The feature dimension of the extracted features.
sampling_rate (`int`, *optional*, defaults to 16000):
The sampling rate at which the audio files should be digitalized expressed in hertz (Hz).
padding_value (`float`, *optional*, defaults to 0.0):
The value that is used to fill the padding values.
do_normalize (`bool`, *optional*, defaults to `False`):
Whether or not to zero-mean unit-variance normalize the input. Normalizing can help to significantly
improve the performance for some models.
num_mel_bins (`int`, *optional*, defaults to 80):
The number of mel-frequency bins in the extracted spectrogram features.
hop_length (`int`, *optional*, defaults to 16):
Number of ms between windows. Otherwise referred to as "shift" in many papers.
win_length (`int`, *optional*, defaults to 64):
Number of ms per window.
win_function (`str`, *optional*, defaults to `"hann_window"`):
Name for the window function used for windowing, must be accessible via `torch.{win_function}`
frame_signal_scale (`float`, *optional*, defaults to 1.0):
Constant multiplied in creating the frames before applying DFT. This argument is deprecated.
fmin (`float`, *optional*, defaults to 80):
Minimum mel frequency in Hz.
fmax (`float`, *optional*, defaults to 7600):
Maximum mel frequency in Hz.
mel_floor (`float`, *optional*, defaults to 1e-10):
Minimum value of mel frequency banks.
reduction_factor (`int`, *optional*, defaults to 2):
Spectrogram length reduction factor. This argument is deprecated.
return_attention_mask (`bool`, *optional*, defaults to `True`):
Whether or not [`~SpeechT5FeatureExtractor.__call__`] should return `attention_mask`.
"""
model_input_names = ["input_values", "attention_mask"]
def __init__(
self,
feature_size: int = 1,
sampling_rate: int = 16000,
padding_value: float = 0.0,
do_normalize: bool = False,
num_mel_bins: int = 80,
hop_length: int = 16,
win_length: int = 64,
win_function: str = "hann_window",
frame_signal_scale: float = 1.0,
fmin: float = 80,
fmax: float = 7600,
mel_floor: float = 1e-10,
reduction_factor: int = 2,
return_attention_mask: bool = True,
**kwargs,
):
super().__init__(feature_size=feature_size, sampling_rate=sampling_rate, padding_value=padding_value, **kwargs)
self.do_normalize = do_normalize
self.return_attention_mask = return_attention_mask
self.num_mel_bins = num_mel_bins
self.hop_length = hop_length
self.win_length = win_length
self.win_function = win_function
self.frame_signal_scale = frame_signal_scale
self.fmin = fmin
self.fmax = fmax
self.mel_floor = mel_floor
self.reduction_factor = reduction_factor
self.sample_size = win_length * sampling_rate // 1000
self.sample_stride = hop_length * sampling_rate // 1000
self.n_fft = optimal_fft_length(self.sample_size)
self.n_freqs = (self.n_fft // 2) + 1
self.window = window_function(window_length=self.sample_size, name=self.win_function, periodic=True)
self.mel_filters = mel_filter_bank(
num_frequency_bins=self.n_freqs,
num_mel_filters=self.num_mel_bins,
min_frequency=self.fmin,
max_frequency=self.fmax,
sampling_rate=self.sampling_rate,
norm="slaney",
mel_scale="slaney",
)
if frame_signal_scale != 1.0:
warnings.warn(
"The argument `frame_signal_scale` is deprecated and will be removed in version 4.30.0 of Transformers",
FutureWarning,
)
if reduction_factor != 2.0:
warnings.warn(
"The argument `reduction_factor` is deprecated and will be removed in version 4.30.0 of Transformers",
FutureWarning,
)
@staticmethod
# Copied from transformers.models.wav2vec2.feature_extraction_wav2vec2.Wav2Vec2FeatureExtractor.zero_mean_unit_var_norm
def zero_mean_unit_var_norm(
input_values: List[np.ndarray], attention_mask: List[np.ndarray], padding_value: float = 0.0
) -> List[np.ndarray]:
"""
Every array in the list is normalized to have zero mean and unit variance
"""
if attention_mask is not None:
attention_mask = np.array(attention_mask, np.int32)
normed_input_values = []
for vector, length in zip(input_values, attention_mask.sum(-1)):
normed_slice = (vector - vector[:length].mean()) / np.sqrt(vector[:length].var() + 1e-7)
if length < normed_slice.shape[0]:
normed_slice[length:] = padding_value
normed_input_values.append(normed_slice)
else:
normed_input_values = [(x - x.mean()) / np.sqrt(x.var() + 1e-7) for x in input_values]
return normed_input_values
def _extract_mel_features(
self,
one_waveform: np.ndarray,
) -> np.ndarray:
"""
Extracts log-mel filterbank features for one waveform array (unbatched).
"""
log_mel_spec = spectrogram(
one_waveform,
window=self.window,
frame_length=self.sample_size,
hop_length=self.sample_stride,
fft_length=self.n_fft,
mel_filters=self.mel_filters,
mel_floor=self.mel_floor,
log_mel="log10",
)
return log_mel_spec.T
def __call__(
self,
audio: Optional[Union[np.ndarray, List[float], List[np.ndarray], List[List[float]]]] = None,
audio_target: Optional[Union[np.ndarray, List[float], List[np.ndarray], List[List[float]]]] = None,
padding: Union[bool, str, PaddingStrategy] = False,
max_length: Optional[int] = None,
truncation: bool = False,
pad_to_multiple_of: Optional[int] = None,
return_attention_mask: Optional[bool] = None,
return_tensors: Optional[Union[str, TensorType]] = None,
sampling_rate: Optional[int] = None,
**kwargs,
) -> BatchFeature:
"""
Main method to featurize and prepare for the model one or several sequence(s).
Pass in a value for `audio` to extract waveform features. Pass in a value for `audio_target` to extract log-mel
spectrogram features.
Args:
audio (`np.ndarray`, `List[float]`, `List[np.ndarray]`, `List[List[float]]`, *optional*):
The sequence or batch of sequences to be processed. Each sequence can be a numpy array, a list of float
values, a list of numpy arrays or a list of list of float values. This outputs waveform features. Must
be mono channel audio, not stereo, i.e. single float per timestep.
audio_target (`np.ndarray`, `List[float]`, `List[np.ndarray]`, `List[List[float]]`, *optional*):
The sequence or batch of sequences to be processed as targets. Each sequence can be a numpy array, a
list of float values, a list of numpy arrays or a list of list of float values. This outputs log-mel
spectrogram features.
padding (`bool`, `str` or [`~utils.PaddingStrategy`], *optional*, defaults to `False`):
Select a strategy to pad the returned sequences (according to the model's padding side and padding
index) among:
- `True` or `'longest'`: Pad to the longest sequence in the batch (or no padding if only a single
sequence if provided).
- `'max_length'`: Pad to a maximum length specified with the argument `max_length` or to the maximum
acceptable input length for the model if that argument is not provided.
- `False` or `'do_not_pad'` (default): No padding (i.e., can output a batch with sequences of different
lengths).
max_length (`int`, *optional*):
Maximum length of the returned list and optionally padding length (see above).
truncation (`bool`):
Activates truncation to cut input sequences longer than *max_length* to *max_length*.
pad_to_multiple_of (`int`, *optional*):
If set will pad the sequence to a multiple of the provided value.
This is especially useful to enable the use of Tensor Cores on NVIDIA hardware with compute capability
`>= 7.5` (Volta), or on TPUs which benefit from having sequence lengths be a multiple of 128.
return_attention_mask (`bool`, *optional*):
Whether to return the attention mask. If left to the default, will return the attention mask according
to the specific feature_extractor's default.
[What are attention masks?](../glossary#attention-mask)
return_tensors (`str` or [`~utils.TensorType`], *optional*):
If set, will return tensors instead of list of python integers. Acceptable values are:
- `'tf'`: Return TensorFlow `tf.constant` objects.
- `'pt'`: Return PyTorch `torch.Tensor` objects.
- `'np'`: Return Numpy `np.ndarray` objects.
sampling_rate (`int`, *optional*):
The sampling rate at which the `audio` or `audio_target` input was sampled. It is strongly recommended
to pass `sampling_rate` at the forward call to prevent silent errors.
"""
if audio is None and audio_target is None:
raise ValueError("You must provide either `audio` or `audio_target` values.")
if sampling_rate is not None:
if sampling_rate != self.sampling_rate:
raise ValueError(
f"The model corresponding to this feature extractor: {self} was trained using a sampling rate of"
f" {self.sampling_rate}. Please make sure that the provided audio input was sampled with"
f" {self.sampling_rate} and not {sampling_rate}."
)
else:
logger.warning(
"It is strongly recommended to pass the ``sampling_rate`` argument to this function. "
"Failing to do so can result in silent errors that might be hard to debug."
)
if audio is not None:
inputs = self._process_audio(
audio,
False,
padding,
max_length,
truncation,
pad_to_multiple_of,
return_attention_mask,
return_tensors,
**kwargs,
)
else:
inputs = None
if audio_target is not None:
inputs_target = self._process_audio(
audio_target,
True,
padding,
max_length,
truncation,
pad_to_multiple_of,
return_attention_mask,
return_tensors,
**kwargs,
)
if inputs is None:
return inputs_target
else:
inputs["labels"] = inputs_target["input_values"]
decoder_attention_mask = inputs_target.get("attention_mask")
if decoder_attention_mask is not None:
inputs["decoder_attention_mask"] = decoder_attention_mask
return inputs
def _process_audio(
self,
speech: Union[np.ndarray, List[float], List[np.ndarray], List[List[float]]],
is_target: bool = False,
padding: Union[bool, str, PaddingStrategy] = False,
max_length: Optional[int] = None,
truncation: bool = False,
pad_to_multiple_of: Optional[int] = None,
return_attention_mask: Optional[bool] = None,
return_tensors: Optional[Union[str, TensorType]] = None,
**kwargs,
) -> BatchFeature:
is_batched_numpy = isinstance(speech, np.ndarray) and len(speech.shape) > 1
if is_batched_numpy and len(speech.shape) > 2:
raise ValueError(f"Only mono-channel audio is supported for input to {self}")
is_batched = is_batched_numpy or (
isinstance(speech, (list, tuple)) and (isinstance(speech[0], (np.ndarray, tuple, list)))
)
if is_batched:
speech = [np.asarray(speech, dtype=np.float32) for speech in speech]
elif not is_batched and not isinstance(speech, np.ndarray):
speech = np.asarray(speech, dtype=np.float32)
elif isinstance(speech, np.ndarray) and speech.dtype is np.dtype(np.float64):
speech = speech.astype(np.float32)
# always return batch
if not is_batched:
speech = [speech]
# needed to make pad() work on spectrogram inputs
feature_size_hack = self.feature_size
# convert into correct format for padding
if is_target:
features = [self._extract_mel_features(waveform) for waveform in speech]
encoded_inputs = BatchFeature({"input_values": features})
self.feature_size = self.num_mel_bins
else:
encoded_inputs = BatchFeature({"input_values": speech})
padded_inputs = self.pad(
encoded_inputs,
padding=padding,
max_length=max_length,
truncation=truncation,
pad_to_multiple_of=pad_to_multiple_of,
return_attention_mask=return_attention_mask,
**kwargs,
)
self.feature_size = feature_size_hack
# convert input values to correct format
input_values = padded_inputs["input_values"]
if not isinstance(input_values[0], np.ndarray):
padded_inputs["input_values"] = [np.asarray(array, dtype=np.float32) for array in input_values]
elif (
not isinstance(input_values, np.ndarray)
and isinstance(input_values[0], np.ndarray)
and input_values[0].dtype is np.dtype(np.float64)
):
padded_inputs["input_values"] = [array.astype(np.float32) for array in input_values]
elif isinstance(input_values, np.ndarray) and input_values.dtype is np.dtype(np.float64):
padded_inputs["input_values"] = input_values.astype(np.float32)
# convert attention_mask to correct format
attention_mask = padded_inputs.get("attention_mask")
if attention_mask is not None:
padded_inputs["attention_mask"] = [np.asarray(array, dtype=np.int32) for array in attention_mask]
# zero-mean and unit-variance normalization
if not is_target and self.do_normalize:
attention_mask = (
attention_mask
if self._get_padding_strategies(padding, max_length=max_length) is not PaddingStrategy.DO_NOT_PAD
else None
)
padded_inputs["input_values"] = self.zero_mean_unit_var_norm(
padded_inputs["input_values"], attention_mask=attention_mask, padding_value=self.padding_value
)
if return_tensors is not None:
padded_inputs = padded_inputs.convert_to_tensors(return_tensors)
return padded_inputs
def to_dict(self) -> Dict[str, Any]:
output = super().to_dict()
# Don't serialize these as they are derived from the other properties.
names = ["window", "mel_filters", "sample_size", "sample_stride", "n_fft", "n_freqs"]
for name in names:
if name in output:
del output[name]
return output
| 17,809 | 44.203046 | 123 | py |
transformers | transformers-main/src/transformers/models/speecht5/convert_speecht5_original_pytorch_checkpoint_to_pytorch.py | # coding=utf-8
# Copyright 2023 The HuggingFace Inc. team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
"""Convert SpeechT5 checkpoint."""
import argparse
import torch
from transformers import (
SpeechT5Config,
SpeechT5FeatureExtractor,
SpeechT5ForSpeechToSpeech,
SpeechT5ForSpeechToText,
SpeechT5ForTextToSpeech,
SpeechT5Processor,
SpeechT5Tokenizer,
logging,
)
from transformers.tokenization_utils import AddedToken
logging.set_verbosity_info()
logger = logging.get_logger("transformers.models.speecht5")
MAPPING_SPEECH_ENCODER_PRENET = {
"speech_encoder_prenet.layer_norm": "speecht5.encoder.prenet.feature_projection.layer_norm",
"speech_encoder_prenet.post_extract_proj": "speecht5.encoder.prenet.feature_projection.projection",
"speech_encoder_prenet.pos_conv.0": "speecht5.encoder.prenet.pos_conv_embed.conv",
"speech_encoder_prenet.mask_emb": "speecht5.encoder.prenet.masked_spec_embed",
}
MAPPING_TEXT_ENCODER_PRENET = {
"text_encoder_prenet.encoder_prenet.0": "speecht5.encoder.prenet.embed_tokens",
"text_encoder_prenet.encoder_prenet.1.alpha": "speecht5.encoder.prenet.encode_positions.alpha",
}
MAPPING_SPEECH_DECODER_PRENET = {
"speech_decoder_prenet.decoder_prenet.0.0.prenet.0.0": "speecht5.decoder.prenet.layers.0",
"speech_decoder_prenet.decoder_prenet.0.0.prenet.1.0": "speecht5.decoder.prenet.layers.1",
"speech_decoder_prenet.decoder_prenet.0.1": "speecht5.decoder.prenet.final_layer",
"speech_decoder_prenet.decoder_prenet.1.alpha": "speecht5.decoder.prenet.encode_positions.alpha",
"speech_decoder_prenet.spkembs_layer.0": "speecht5.decoder.prenet.speaker_embeds_layer",
}
MAPPING_SPEECH_DECODER_POSTNET = {
"speech_decoder_postnet.feat_out": "speech_decoder_postnet.feat_out",
"speech_decoder_postnet.prob_out": "speech_decoder_postnet.prob_out",
"speech_decoder_postnet.postnet.postnet.0.0": "speech_decoder_postnet.layers.0.conv",
"speech_decoder_postnet.postnet.postnet.0.1": "speech_decoder_postnet.layers.0.batch_norm",
"speech_decoder_postnet.postnet.postnet.1.0": "speech_decoder_postnet.layers.1.conv",
"speech_decoder_postnet.postnet.postnet.1.1": "speech_decoder_postnet.layers.1.batch_norm",
"speech_decoder_postnet.postnet.postnet.2.0": "speech_decoder_postnet.layers.2.conv",
"speech_decoder_postnet.postnet.postnet.2.1": "speech_decoder_postnet.layers.2.batch_norm",
"speech_decoder_postnet.postnet.postnet.3.0": "speech_decoder_postnet.layers.3.conv",
"speech_decoder_postnet.postnet.postnet.3.1": "speech_decoder_postnet.layers.3.batch_norm",
"speech_decoder_postnet.postnet.postnet.4.0": "speech_decoder_postnet.layers.4.conv",
"speech_decoder_postnet.postnet.postnet.4.1": "speech_decoder_postnet.layers.4.batch_norm",
}
MAPPING_TEXT_DECODER_PRENET = {
"text_decoder_prenet.embed_tokens": "speecht5.decoder.prenet.embed_tokens",
}
MAPPING_TEXT_DECODER_POSTNET = {
"text_decoder_postnet.output_projection": "text_decoder_postnet.lm_head",
}
MAPPING_ENCODER = {
"encoder.layers.*.self_attn.k_proj": "speecht5.encoder.wrapped_encoder.layers.*.attention.k_proj",
"encoder.layers.*.self_attn.v_proj": "speecht5.encoder.wrapped_encoder.layers.*.attention.v_proj",
"encoder.layers.*.self_attn.q_proj": "speecht5.encoder.wrapped_encoder.layers.*.attention.q_proj",
"encoder.layers.*.self_attn.out_proj": "speecht5.encoder.wrapped_encoder.layers.*.attention.out_proj",
"encoder.layers.*.self_attn_layer_norm": "speecht5.encoder.wrapped_encoder.layers.*.layer_norm",
"encoder.layers.*.fc1": "speecht5.encoder.wrapped_encoder.layers.*.feed_forward.intermediate_dense",
"encoder.layers.*.fc2": "speecht5.encoder.wrapped_encoder.layers.*.feed_forward.output_dense",
"encoder.layers.*.final_layer_norm": "speecht5.encoder.wrapped_encoder.layers.*.final_layer_norm",
"encoder.layer_norm": "speecht5.encoder.wrapped_encoder.layer_norm",
"encoder.pos_emb.pe_k": "speecht5.encoder.wrapped_encoder.embed_positions.pe_k",
}
MAPPING_DECODER = {
"decoder.layers.*.self_attn.k_proj": "speecht5.decoder.wrapped_decoder.layers.*.self_attn.k_proj",
"decoder.layers.*.self_attn.v_proj": "speecht5.decoder.wrapped_decoder.layers.*.self_attn.v_proj",
"decoder.layers.*.self_attn.q_proj": "speecht5.decoder.wrapped_decoder.layers.*.self_attn.q_proj",
"decoder.layers.*.self_attn.out_proj": "speecht5.decoder.wrapped_decoder.layers.*.self_attn.out_proj",
"decoder.layers.*.self_attn_layer_norm": "speecht5.decoder.wrapped_decoder.layers.*.self_attn_layer_norm",
"decoder.layers.*.encoder_attn.k_proj": "speecht5.decoder.wrapped_decoder.layers.*.encoder_attn.k_proj",
"decoder.layers.*.encoder_attn.v_proj": "speecht5.decoder.wrapped_decoder.layers.*.encoder_attn.v_proj",
"decoder.layers.*.encoder_attn.q_proj": "speecht5.decoder.wrapped_decoder.layers.*.encoder_attn.q_proj",
"decoder.layers.*.encoder_attn.out_proj": "speecht5.decoder.wrapped_decoder.layers.*.encoder_attn.out_proj",
"decoder.layers.*.encoder_attn_layer_norm": "speecht5.decoder.wrapped_decoder.layers.*.encoder_attn_layer_norm",
"decoder.layers.*.fc1": "speecht5.decoder.wrapped_decoder.layers.*.feed_forward.intermediate_dense",
"decoder.layers.*.fc2": "speecht5.decoder.wrapped_decoder.layers.*.feed_forward.output_dense",
"decoder.layers.*.final_layer_norm": "speecht5.decoder.wrapped_decoder.layers.*.final_layer_norm",
}
MAPPING_S2T = {
**MAPPING_SPEECH_ENCODER_PRENET,
**MAPPING_ENCODER,
**MAPPING_DECODER,
**MAPPING_TEXT_DECODER_PRENET,
**MAPPING_TEXT_DECODER_POSTNET,
}
MAPPING_T2S = {
**MAPPING_TEXT_ENCODER_PRENET,
**MAPPING_ENCODER,
**MAPPING_DECODER,
**MAPPING_SPEECH_DECODER_PRENET,
**MAPPING_SPEECH_DECODER_POSTNET,
}
MAPPING_S2S = {
**MAPPING_SPEECH_ENCODER_PRENET,
**MAPPING_ENCODER,
**MAPPING_DECODER,
**MAPPING_SPEECH_DECODER_PRENET,
**MAPPING_SPEECH_DECODER_POSTNET,
}
TOP_LEVEL_KEYS = []
IGNORE_KEYS = [
"encoder.version",
"encoder.layers.*.norm_k.weight",
"encoder.layers.*.norm_k.bias",
"decoder.version",
"decoder.layers.*.norm_k.weight",
"decoder.layers.*.norm_k.bias",
"decoder.pos_emb.pe_k",
"speech_encoder_prenet.embed_positions._float_tensor",
"text_decoder_prenet.embed_positions._float_tensor",
]
IGNORE_KEYS_S2T = IGNORE_KEYS + [
"encoder.proj",
"text_encoder_prenet.*",
"speech_decoder_prenet.*",
"speech_decoder_postnet.*",
]
IGNORE_KEYS_T2S = IGNORE_KEYS + [
"encoder.proj",
"speech_encoder_prenet.*",
"text_decoder_prenet.*",
"text_decoder_postnet.*",
]
IGNORE_KEYS_S2S = IGNORE_KEYS + [
"encoder.proj",
"text_encoder_prenet.*",
"text_decoder_prenet.*",
"text_decoder_postnet.*",
]
def set_recursively(hf_pointer, key, value, full_name, weight_type):
for attribute in key.split("."):
hf_pointer = getattr(hf_pointer, attribute)
if weight_type is not None:
hf_shape = getattr(hf_pointer, weight_type).shape
else:
hf_shape = hf_pointer.shape
if hf_shape != value.shape:
raise ValueError(
f"Shape of hf {key + '.' + weight_type if weight_type is not None else ''} is {hf_shape}, but should be"
f" {value.shape} for {full_name}"
)
if weight_type == "weight":
hf_pointer.weight.data = value
elif weight_type == "weight_g":
hf_pointer.weight_g.data = value
elif weight_type == "weight_v":
hf_pointer.weight_v.data = value
elif weight_type == "bias":
hf_pointer.bias.data = value
elif weight_type == "running_mean":
hf_pointer.running_mean.data = value
elif weight_type == "running_var":
hf_pointer.running_var.data = value
elif weight_type == "num_batches_tracked":
hf_pointer.num_batches_tracked.data = value
else:
hf_pointer.data = value
logger.info(f"{key + ('.' + weight_type if weight_type is not None else '')} was initialized from {full_name}.")
def should_ignore(name, ignore_keys):
for key in ignore_keys:
if key.endswith(".*"):
if name.startswith(key[:-1]):
return True
elif ".*." in key:
prefix, suffix = key.split(".*.")
if prefix in name and suffix in name:
return True
elif key in name:
return True
return False
def recursively_load_weights(fairseq_dict, hf_model, task):
unused_weights = []
if task == "s2t":
feature_encoder = hf_model.speecht5.encoder.prenet.feature_encoder
MAPPING = MAPPING_S2T
IGNORE_KEYS = IGNORE_KEYS_S2T
elif task == "t2s":
feature_encoder = None
MAPPING = MAPPING_T2S
IGNORE_KEYS = IGNORE_KEYS_T2S
elif task == "s2s":
feature_encoder = hf_model.speecht5.encoder.prenet.feature_encoder
MAPPING = MAPPING_S2S
IGNORE_KEYS = IGNORE_KEYS_S2S
else:
raise ValueError(f"Unsupported task: {task}")
for name, value in fairseq_dict.items():
if should_ignore(name, IGNORE_KEYS):
logger.info(f"{name} was ignored")
continue
is_used = False
if "conv_layers" in name:
load_conv_layer(
name,
value,
feature_encoder,
unused_weights,
hf_model.config.feat_extract_norm == "group",
)
is_used = True
else:
for key, mapped_key in MAPPING.items():
# mapped_key = "speecht5." + mapped_key if mapped_key not in TOP_LEVEL_KEYS else mapped_key
if "*" in key:
prefix, suffix = key.split(".*.")
if prefix in name and suffix in name:
key = suffix
# if key in name or key.split("w2v_model.")[-1] == name.split(".")[0]:
if key in name:
is_used = True
if "*" in mapped_key:
layer_index = name.split(key)[0].split(".")[-2]
mapped_key = mapped_key.replace("*", layer_index)
if "weight_g" in name:
weight_type = "weight_g"
elif "weight_v" in name:
weight_type = "weight_v"
elif "bias" in name:
weight_type = "bias"
elif "weight" in name:
weight_type = "weight"
elif "running_mean" in name:
weight_type = "running_mean"
elif "running_var" in name:
weight_type = "running_var"
elif "num_batches_tracked" in name:
weight_type = "num_batches_tracked"
else:
weight_type = None
set_recursively(hf_model, mapped_key, value, name, weight_type)
continue
if not is_used:
unused_weights.append(name)
logger.warning(f"Unused weights: {unused_weights}")
def load_conv_layer(full_name, value, feature_extractor, unused_weights, use_group_norm):
name = full_name.split("conv_layers.")[-1]
items = name.split(".")
layer_id = int(items[0])
type_id = int(items[1])
if type_id == 0:
if "bias" in name:
if value.shape != feature_extractor.conv_layers[layer_id].conv.bias.data.shape:
raise ValueError(
f"{full_name} has size {value.shape}, but"
f" {feature_extractor.conv_layers[layer_id].conv.bias.data.shape} was found."
)
feature_extractor.conv_layers[layer_id].conv.bias.data = value
logger.info(f"Feat extract conv layer {layer_id} was initialized from {full_name}.")
elif "weight" in name:
if value.shape != feature_extractor.conv_layers[layer_id].conv.weight.data.shape:
raise ValueError(
f"{full_name} has size {value.shape}, but"
f" {feature_extractor.conv_layers[layer_id].conv.weight.data.shape} was found."
)
feature_extractor.conv_layers[layer_id].conv.weight.data = value
logger.info(f"Feat extract conv layer {layer_id} was initialized from {full_name}.")
elif (type_id == 2 and not use_group_norm) or (type_id == 2 and layer_id == 0 and use_group_norm):
if "bias" in name:
if value.shape != feature_extractor.conv_layers[layer_id].layer_norm.bias.data.shape:
raise ValueError(
f"{full_name} has size {value.shape}, but"
f" {feature_extractor.conv_layers[layer_id].layer_norm.bias.data.shape} was found."
)
feature_extractor.conv_layers[layer_id].layer_norm.bias.data = value
logger.info(f"Feat extract layer norm weight of layer {layer_id} was initialized from {full_name}.")
elif "weight" in name:
if value.shape != feature_extractor.conv_layers[layer_id].layer_norm.weight.data.shape:
raise ValueError(
f"{full_name} has size {value.shape}, but"
f" {feature_extractor.conv_layers[layer_id].layer_norm.weight.data.shape} was found."
)
feature_extractor.conv_layers[layer_id].layer_norm.weight.data = value
logger.info(f"Feat extract layer norm weight of layer {layer_id} was initialized from {full_name}.")
else:
unused_weights.append(full_name)
@torch.no_grad()
def convert_speecht5_checkpoint(
task,
checkpoint_path,
pytorch_dump_folder_path,
config_path=None,
vocab_path=None,
repo_id=None,
):
"""
Copy/paste/tweak model's weights to transformers design.
"""
if config_path is not None:
config = SpeechT5Config.from_pretrained(config_path)
else:
config = SpeechT5Config()
if task == "s2t":
config.max_length = config.max_text_positions
model = SpeechT5ForSpeechToText(config)
elif task == "t2s":
config.max_speech_positions = 1876
config.max_text_positions = 600
config.max_length = config.max_speech_positions
model = SpeechT5ForTextToSpeech(config)
elif task == "s2s":
config.max_speech_positions = 1876
config.max_length = config.max_speech_positions
model = SpeechT5ForSpeechToSpeech(config)
else:
raise ValueError(f"Unknown task name: {task}")
if vocab_path:
tokenizer = SpeechT5Tokenizer(vocab_path, model_max_length=config.max_text_positions)
# Mask token behaves like a normal word, i.e. include the space before it
mask_token = AddedToken("<mask>", lstrip=True, rstrip=False)
tokenizer.mask_token = mask_token
tokenizer.add_special_tokens({"mask_token": mask_token})
tokenizer.add_tokens(["<ctc_blank>"])
feature_extractor = SpeechT5FeatureExtractor()
processor = SpeechT5Processor(tokenizer=tokenizer, feature_extractor=feature_extractor)
processor.save_pretrained(pytorch_dump_folder_path)
fairseq_checkpoint = torch.load(checkpoint_path)
recursively_load_weights(fairseq_checkpoint["model"], model, task)
model.save_pretrained(pytorch_dump_folder_path)
if repo_id:
print("Pushing to the hub...")
processor.push_to_hub(repo_id)
model.push_to_hub(repo_id)
if __name__ == "__main__":
parser = argparse.ArgumentParser()
parser.add_argument(
"--task",
default="s2t",
type=str,
help="Type of the SpeechT5 model you'd like to convert. Should be one of 's2t', 't2s', 's2s'.",
)
parser.add_argument("--checkpoint_path", required=True, default=None, type=str, help="Path to fairseq checkpoint")
parser.add_argument("--vocab_path", default=None, type=str, help="Path to SentencePiece model")
parser.add_argument("--config_path", default=None, type=str, help="Path to hf config.json of model to convert")
parser.add_argument(
"--pytorch_dump_folder_path", required=True, default=None, type=str, help="Path to the output PyTorch model."
)
parser.add_argument(
"--push_to_hub", default=None, type=str, help="Where to upload the converted model on the 🤗 hub."
)
args = parser.parse_args()
convert_speecht5_checkpoint(
args.task,
args.checkpoint_path,
args.pytorch_dump_folder_path,
args.config_path,
args.vocab_path,
args.push_to_hub,
)
| 17,191 | 41.766169 | 118 | py |
transformers | transformers-main/src/transformers/models/mask2former/convert_mask2former_original_pytorch_checkpoint_to_pytorch.py | # coding=utf-8
# Copyright 2022 Meta Platforms, Inc. and The HuggingFace Inc. team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
import json
import sys
from argparse import ArgumentParser
from dataclasses import dataclass
from pathlib import Path
from pprint import pformat
from typing import Any, Dict, Iterator, List, Set, Tuple
import requests
import torch
import torchvision.transforms as T
from detectron2.checkpoint import DetectionCheckpointer
from detectron2.config import get_cfg
from detectron2.projects.deeplab import add_deeplab_config
from huggingface_hub import hf_hub_download
from PIL import Image
from torch import Tensor, nn
from transformers import (
Mask2FormerConfig,
Mask2FormerForUniversalSegmentation,
Mask2FormerImageProcessor,
Mask2FormerModel,
SwinConfig,
)
from transformers.models.mask2former.modeling_mask2former import (
Mask2FormerForUniversalSegmentationOutput,
Mask2FormerModelOutput,
)
from transformers.utils import logging
StateDict = Dict[str, Tensor]
logging.set_verbosity_info()
logger = logging.get_logger()
torch.manual_seed(0)
class TrackedStateDict:
def __init__(self, to_track: Dict):
"""This class "tracks" a python dictionary by keeping track of which item is accessed.
Args:
to_track (Dict): The dictionary we wish to track
"""
self.to_track = to_track
self._seen: Set[str] = set()
def __getitem__(self, key: str) -> Any:
return self.to_track[key]
def __setitem__(self, key: str, item: Any):
self._seen.add(key)
self.to_track[key] = item
def diff(self) -> List[str]:
"""This method returns a set difference between the keys in the tracked state dict and the one we have access so far.
This is an effective method to check if we have update all the keys
Returns:
List[str]: List of keys not yet updated
"""
return set(self.to_track.keys()) - self._seen
def copy(self) -> Dict:
# proxy the call to the internal dictionary
return self.to_track.copy()
# We will verify our results on an image of cute cats
def prepare_img():
url = "http://images.cocodataset.org/val2017/000000039769.jpg"
img_data = requests.get(url, stream=True).raw
im = Image.open(img_data)
return im
@dataclass
class Args:
"""Fake command line arguments needed by mask2former/detectron implementation"""
config_file: str
def setup_cfg(args: Args):
# load config from file and command-line arguments
cfg = get_cfg()
add_deeplab_config(cfg)
add_maskformer2_config(cfg)
cfg.merge_from_file(args.config_file)
cfg.freeze()
return cfg
class OriginalMask2FormerConfigToOursConverter:
def __call__(self, original_config: object) -> Mask2FormerConfig:
model = original_config.MODEL
repo_id = "huggingface/label-files"
if model.SEM_SEG_HEAD.NUM_CLASSES == 847:
filename = "mask2former-ade20k-full-id2label.json"
elif model.SEM_SEG_HEAD.NUM_CLASSES == 150:
filename = "ade20k-id2label.json"
elif model.SEM_SEG_HEAD.NUM_CLASSES == 80:
filename = "coco-detection-mmdet-id2label.json"
elif model.SEM_SEG_HEAD.NUM_CLASSES == 171:
filename = "mask2former-coco-stuff-id2label.json"
elif model.SEM_SEG_HEAD.NUM_CLASSES == 133:
filename = "coco-panoptic-id2label.json"
elif model.SEM_SEG_HEAD.NUM_CLASSES == 19:
filename = "cityscapes-id2label.json"
elif model.SEM_SEG_HEAD.NUM_CLASSES == 8:
filename = "cityscapes-instance-id2label.json"
elif model.SEM_SEG_HEAD.NUM_CLASSES == 65:
filename = "mapillary-vistas-id2label.json"
id2label = json.load(open(hf_hub_download(repo_id, filename, repo_type="dataset"), "r"))
id2label = {int(k): v for k, v in id2label.items()}
label2id = {label: idx for idx, label in id2label.items()}
if model.SWIN.EMBED_DIM == 96:
backbone_config = SwinConfig.from_pretrained(
"microsoft/swin-tiny-patch4-window7-224", out_features=["stage1", "stage2", "stage3", "stage4"]
)
elif model.SWIN.EMBED_DIM == 128:
backbone_config = SwinConfig(
embed_dim=128,
window_size=12,
depths=(2, 2, 18, 2),
num_heads=(4, 8, 16, 32),
out_features=["stage1", "stage2", "stage3", "stage4"],
)
elif model.SWIN.EMBED_DIM == 192:
backbone_config = SwinConfig.from_pretrained(
"microsoft/swin-large-patch4-window12-384", out_features=["stage1", "stage2", "stage3", "stage4"]
)
else:
raise ValueError(f"embed dim {model.SWIN.EMBED_DIM} not supported for Swin!")
backbone_config.drop_path_rate = model.SWIN.DROP_PATH_RATE
backbone_config.attention_probs_dropout_prob = model.SWIN.ATTN_DROP_RATE
backbone_config.depths = model.SWIN.DEPTHS
config: Mask2FormerConfig = Mask2FormerConfig(
ignore_value=model.SEM_SEG_HEAD.IGNORE_VALUE,
num_labels=model.SEM_SEG_HEAD.NUM_CLASSES,
num_queries=model.MASK_FORMER.NUM_OBJECT_QUERIES,
no_object_weight=model.MASK_FORMER.NO_OBJECT_WEIGHT,
class_weight=model.MASK_FORMER.CLASS_WEIGHT,
mask_weight=model.MASK_FORMER.MASK_WEIGHT,
dice_weight=model.MASK_FORMER.DICE_WEIGHT,
train_num_points=model.MASK_FORMER.TRAIN_NUM_POINTS,
oversample_ratio=model.MASK_FORMER.OVERSAMPLE_RATIO,
importance_sample_ratio=model.MASK_FORMER.IMPORTANCE_SAMPLE_RATIO,
init_std=0.02,
init_xavier_std=1.0,
use_auxiliary_loss=model.MASK_FORMER.DEEP_SUPERVISION,
feature_strides=[4, 8, 16, 32],
backbone_config=backbone_config,
id2label=id2label,
label2id=label2id,
feature_size=model.SEM_SEG_HEAD.CONVS_DIM,
mask_feature_size=model.SEM_SEG_HEAD.MASK_DIM,
hidden_dim=model.MASK_FORMER.HIDDEN_DIM,
encoder_layers=model.SEM_SEG_HEAD.TRANSFORMER_ENC_LAYERS,
encoder_feedforward_dim=1024,
decoder_layers=model.MASK_FORMER.DEC_LAYERS,
num_attention_heads=model.MASK_FORMER.NHEADS,
dropout=model.MASK_FORMER.DROPOUT,
dim_feedforward=model.MASK_FORMER.DIM_FEEDFORWARD,
pre_norm=model.MASK_FORMER.PRE_NORM,
enforce_input_proj=model.MASK_FORMER.ENFORCE_INPUT_PROJ,
common_stride=model.SEM_SEG_HEAD.COMMON_STRIDE,
)
return config
class OriginalMask2FormerConfigToImageProcessorConverter:
def __call__(self, original_config: object) -> Mask2FormerImageProcessor:
model = original_config.MODEL
model_input = original_config.INPUT
return Mask2FormerImageProcessor(
image_mean=(torch.tensor(model.PIXEL_MEAN) / 255).tolist(),
image_std=(torch.tensor(model.PIXEL_STD) / 255).tolist(),
size=model_input.MIN_SIZE_TEST,
max_size=model_input.MAX_SIZE_TEST,
num_labels=model.SEM_SEG_HEAD.NUM_CLASSES,
ignore_index=model.SEM_SEG_HEAD.IGNORE_VALUE,
size_divisibility=32,
)
class OriginalMask2FormerCheckpointToOursConverter:
def __init__(self, original_model: nn.Module, config: Mask2FormerConfig):
self.original_model = original_model
self.config = config
def pop_all(self, renamed_keys: List[Tuple[str, str]], dst_state_dict: StateDict, src_state_dict: StateDict):
for src_key, dst_key in renamed_keys:
dst_state_dict[dst_key] = src_state_dict.pop(src_key)
def replace_maskformer_swin_backbone(
self, dst_state_dict: StateDict, src_state_dict: StateDict, config: Mask2FormerConfig
):
dst_prefix: str = "pixel_level_module.encoder"
src_prefix: str = "backbone"
renamed_keys = [
(
f"{src_prefix}.patch_embed.proj.weight",
f"{dst_prefix}.model.embeddings.patch_embeddings.projection.weight",
),
(f"{src_prefix}.patch_embed.proj.bias", f"{dst_prefix}.model.embeddings.patch_embeddings.projection.bias"),
(f"{src_prefix}.patch_embed.norm.weight", f"{dst_prefix}.model.embeddings.norm.weight"),
(f"{src_prefix}.patch_embed.norm.bias", f"{dst_prefix}.model.embeddings.norm.bias"),
]
num_layers = len(config.backbone_config.depths)
for layer_idx in range(num_layers):
for block_idx in range(config.backbone_config.depths[layer_idx]):
renamed_keys.extend(
[ # src, dst
(
f"{src_prefix}.layers.{layer_idx}.blocks.{block_idx}.norm1.weight",
f"{dst_prefix}.model.encoder.layers.{layer_idx}.blocks.{block_idx}.layernorm_before.weight",
),
(
f"{src_prefix}.layers.{layer_idx}.blocks.{block_idx}.norm1.bias",
f"{dst_prefix}.model.encoder.layers.{layer_idx}.blocks.{block_idx}.layernorm_before.bias",
),
(
f"{src_prefix}.layers.{layer_idx}.blocks.{block_idx}.attn.relative_position_bias_table",
f"{dst_prefix}.model.encoder.layers.{layer_idx}.blocks.{block_idx}.attention.self.relative_position_bias_table",
),
]
)
# now we need to handle the attentions
# read in weights + bias of input projection layer of cross-attention
src_att_weight = src_state_dict[f"{src_prefix}.layers.{layer_idx}.blocks.{block_idx}.attn.qkv.weight"]
src_att_bias = src_state_dict[f"{src_prefix}.layers.{layer_idx}.blocks.{block_idx}.attn.qkv.bias"]
size = src_att_weight.shape[0]
offset = size // 3
dst_state_dict[
f"{dst_prefix}.model.encoder.layers.{layer_idx}.blocks.{block_idx}.attention.self.query.weight"
] = src_att_weight[:offset, :]
dst_state_dict[
f"{dst_prefix}.model.encoder.layers.{layer_idx}.blocks.{block_idx}.attention.self.query.bias"
] = src_att_bias[:offset]
dst_state_dict[
f"{dst_prefix}.model.encoder.layers.{layer_idx}.blocks.{block_idx}.attention.self.key.weight"
] = src_att_weight[offset : offset * 2, :]
dst_state_dict[
f"{dst_prefix}.model.encoder.layers.{layer_idx}.blocks.{block_idx}.attention.self.key.bias"
] = src_att_bias[offset : offset * 2]
dst_state_dict[
f"{dst_prefix}.model.encoder.layers.{layer_idx}.blocks.{block_idx}.attention.self.value.weight"
] = src_att_weight[-offset:, :]
dst_state_dict[
f"{dst_prefix}.model.encoder.layers.{layer_idx}.blocks.{block_idx}.attention.self.value.bias"
] = src_att_bias[-offset:]
# let's pop them
src_state_dict.pop(f"{src_prefix}.layers.{layer_idx}.blocks.{block_idx}.attn.qkv.weight")
src_state_dict.pop(f"{src_prefix}.layers.{layer_idx}.blocks.{block_idx}.attn.qkv.bias")
# proj
renamed_keys.extend(
[
(
f"{src_prefix}.layers.{layer_idx}.blocks.{block_idx}.attn.proj.weight",
f"{dst_prefix}.model.encoder.layers.{layer_idx}.blocks.{block_idx}.attention.output.dense.weight",
),
(
f"{src_prefix}.layers.{layer_idx}.blocks.{block_idx}.attn.proj.bias",
f"{dst_prefix}.model.encoder.layers.{layer_idx}.blocks.{block_idx}.attention.output.dense.bias",
),
]
)
# second norm
renamed_keys.extend(
[
(
f"{src_prefix}.layers.{layer_idx}.blocks.{block_idx}.norm2.weight",
f"{dst_prefix}.model.encoder.layers.{layer_idx}.blocks.{block_idx}.layernorm_after.weight",
),
(
f"{src_prefix}.layers.{layer_idx}.blocks.{block_idx}.norm2.bias",
f"{dst_prefix}.model.encoder.layers.{layer_idx}.blocks.{block_idx}.layernorm_after.bias",
),
]
)
# mlp
renamed_keys.extend(
[
(
f"{src_prefix}.layers.{layer_idx}.blocks.{block_idx}.mlp.fc1.weight",
f"{dst_prefix}.model.encoder.layers.{layer_idx}.blocks.{block_idx}.intermediate.dense.weight",
),
(
f"{src_prefix}.layers.{layer_idx}.blocks.{block_idx}.mlp.fc1.bias",
f"{dst_prefix}.model.encoder.layers.{layer_idx}.blocks.{block_idx}.intermediate.dense.bias",
),
(
f"{src_prefix}.layers.{layer_idx}.blocks.{block_idx}.mlp.fc2.weight",
f"{dst_prefix}.model.encoder.layers.{layer_idx}.blocks.{block_idx}.output.dense.weight",
),
(
f"{src_prefix}.layers.{layer_idx}.blocks.{block_idx}.mlp.fc2.bias",
f"{dst_prefix}.model.encoder.layers.{layer_idx}.blocks.{block_idx}.output.dense.bias",
),
]
)
renamed_keys.extend(
[
(
f"{src_prefix}.layers.{layer_idx}.blocks.{block_idx}.attn.relative_position_index",
f"{dst_prefix}.model.encoder.layers.{layer_idx}.blocks.{block_idx}.attention.self.relative_position_index",
)
]
)
if layer_idx < num_layers - 1:
# patch merging
renamed_keys.extend(
[
(
f"{src_prefix}.layers.{layer_idx}.downsample.reduction.weight",
f"{dst_prefix}.model.encoder.layers.{layer_idx}.downsample.reduction.weight",
),
(
f"{src_prefix}.layers.{layer_idx}.downsample.norm.weight",
f"{dst_prefix}.model.encoder.layers.{layer_idx}.downsample.norm.weight",
),
(
f"{src_prefix}.layers.{layer_idx}.downsample.norm.bias",
f"{dst_prefix}.model.encoder.layers.{layer_idx}.downsample.norm.bias",
),
]
)
# hidden states norms
renamed_keys.extend(
[
(
f"{src_prefix}.norm{layer_idx}.weight",
f"{dst_prefix}.hidden_states_norms.{layer_idx}.weight",
),
(
f"{src_prefix}.norm{layer_idx}.bias",
f"{dst_prefix}.hidden_states_norms.{layer_idx}.bias",
),
]
)
self.pop_all(renamed_keys, dst_state_dict, src_state_dict)
def replace_swin_backbone(self, dst_state_dict: StateDict, src_state_dict: StateDict, config: Mask2FormerConfig):
dst_prefix: str = "pixel_level_module.encoder"
src_prefix: str = "backbone"
renamed_keys = [
(
f"{src_prefix}.patch_embed.proj.weight",
f"{dst_prefix}.embeddings.patch_embeddings.projection.weight",
),
(f"{src_prefix}.patch_embed.proj.bias", f"{dst_prefix}.embeddings.patch_embeddings.projection.bias"),
(f"{src_prefix}.patch_embed.norm.weight", f"{dst_prefix}.embeddings.norm.weight"),
(f"{src_prefix}.patch_embed.norm.bias", f"{dst_prefix}.embeddings.norm.bias"),
]
for layer_idx in range(len(config.backbone_config.depths)):
for block_idx in range(config.backbone_config.depths[layer_idx]):
renamed_keys.extend(
[ # src, dst
(
f"{src_prefix}.layers.{layer_idx}.blocks.{block_idx}.norm1.weight",
f"{dst_prefix}.encoder.layers.{layer_idx}.blocks.{block_idx}.layernorm_before.weight",
),
(
f"{src_prefix}.layers.{layer_idx}.blocks.{block_idx}.norm1.bias",
f"{dst_prefix}.encoder.layers.{layer_idx}.blocks.{block_idx}.layernorm_before.bias",
),
(
f"{src_prefix}.layers.{layer_idx}.blocks.{block_idx}.attn.relative_position_bias_table",
f"{dst_prefix}.encoder.layers.{layer_idx}.blocks.{block_idx}.attention.self.relative_position_bias_table",
),
]
)
# now we need to handle the attentions
# read in weights + bias of input projection layer of cross-attention
src_att_weight = src_state_dict[f"{src_prefix}.layers.{layer_idx}.blocks.{block_idx}.attn.qkv.weight"]
src_att_bias = src_state_dict[f"{src_prefix}.layers.{layer_idx}.blocks.{block_idx}.attn.qkv.bias"]
size = src_att_weight.shape[0]
offset = size // 3
dst_state_dict[
f"{dst_prefix}.encoder.layers.{layer_idx}.blocks.{block_idx}.attention.self.query.weight"
] = src_att_weight[:offset, :]
dst_state_dict[
f"{dst_prefix}.encoder.layers.{layer_idx}.blocks.{block_idx}.attention.self.query.bias"
] = src_att_bias[:offset]
dst_state_dict[
f"{dst_prefix}.encoder.layers.{layer_idx}.blocks.{block_idx}.attention.self.key.weight"
] = src_att_weight[offset : offset * 2, :]
dst_state_dict[
f"{dst_prefix}.encoder.layers.{layer_idx}.blocks.{block_idx}.attention.self.key.bias"
] = src_att_bias[offset : offset * 2]
dst_state_dict[
f"{dst_prefix}.encoder.layers.{layer_idx}.blocks.{block_idx}.attention.self.value.weight"
] = src_att_weight[-offset:, :]
dst_state_dict[
f"{dst_prefix}.encoder.layers.{layer_idx}.blocks.{block_idx}.attention.self.value.bias"
] = src_att_bias[-offset:]
# let's pop them
src_state_dict.pop(f"{src_prefix}.layers.{layer_idx}.blocks.{block_idx}.attn.qkv.weight")
src_state_dict.pop(f"{src_prefix}.layers.{layer_idx}.blocks.{block_idx}.attn.qkv.bias")
# proj
renamed_keys.extend(
[
(
f"{src_prefix}.layers.{layer_idx}.blocks.{block_idx}.attn.proj.weight",
f"{dst_prefix}.encoder.layers.{layer_idx}.blocks.{block_idx}.attention.output.dense.weight",
),
(
f"{src_prefix}.layers.{layer_idx}.blocks.{block_idx}.attn.proj.bias",
f"{dst_prefix}.encoder.layers.{layer_idx}.blocks.{block_idx}.attention.output.dense.bias",
),
]
)
# second norm
renamed_keys.extend(
[
(
f"{src_prefix}.layers.{layer_idx}.blocks.{block_idx}.norm2.weight",
f"{dst_prefix}.encoder.layers.{layer_idx}.blocks.{block_idx}.layernorm_after.weight",
),
(
f"{src_prefix}.layers.{layer_idx}.blocks.{block_idx}.norm2.bias",
f"{dst_prefix}.encoder.layers.{layer_idx}.blocks.{block_idx}.layernorm_after.bias",
),
]
)
# mlp
renamed_keys.extend(
[
(
f"{src_prefix}.layers.{layer_idx}.blocks.{block_idx}.mlp.fc1.weight",
f"{dst_prefix}.encoder.layers.{layer_idx}.blocks.{block_idx}.intermediate.dense.weight",
),
(
f"{src_prefix}.layers.{layer_idx}.blocks.{block_idx}.mlp.fc1.bias",
f"{dst_prefix}.encoder.layers.{layer_idx}.blocks.{block_idx}.intermediate.dense.bias",
),
(
f"{src_prefix}.layers.{layer_idx}.blocks.{block_idx}.mlp.fc2.weight",
f"{dst_prefix}.encoder.layers.{layer_idx}.blocks.{block_idx}.output.dense.weight",
),
(
f"{src_prefix}.layers.{layer_idx}.blocks.{block_idx}.mlp.fc2.bias",
f"{dst_prefix}.encoder.layers.{layer_idx}.blocks.{block_idx}.output.dense.bias",
),
]
)
renamed_keys.extend(
[
(
f"{src_prefix}.layers.{layer_idx}.blocks.{block_idx}.attn.relative_position_index",
f"{dst_prefix}.encoder.layers.{layer_idx}.blocks.{block_idx}.attention.self.relative_position_index",
)
]
)
if layer_idx < 3:
# patch merging
renamed_keys.extend(
[
(
f"{src_prefix}.layers.{layer_idx}.downsample.reduction.weight",
f"{dst_prefix}.encoder.layers.{layer_idx}.downsample.reduction.weight",
),
(
f"{src_prefix}.layers.{layer_idx}.downsample.norm.weight",
f"{dst_prefix}.encoder.layers.{layer_idx}.downsample.norm.weight",
),
(
f"{src_prefix}.layers.{layer_idx}.downsample.norm.bias",
f"{dst_prefix}.encoder.layers.{layer_idx}.downsample.norm.bias",
),
]
)
# hidden states norms
renamed_keys.extend(
[
(
f"{src_prefix}.norm{layer_idx}.weight",
f"{dst_prefix}.hidden_states_norms.stage{layer_idx+1}.weight",
),
(
f"{src_prefix}.norm{layer_idx}.bias",
f"{dst_prefix}.hidden_states_norms.stage{layer_idx+1}.bias",
),
]
)
self.pop_all(renamed_keys, dst_state_dict, src_state_dict)
# Backbone + Pixel Decoder
def replace_pixel_module(self, dst_state_dict: StateDict, src_state_dict: StateDict):
dst_prefix: str = "pixel_level_module.decoder"
src_prefix: str = "sem_seg_head.pixel_decoder"
self.replace_swin_backbone(dst_state_dict, src_state_dict, self.config)
def rename_keys_for_weight_bias(src_prefix: str, dst_prefix: str):
return [
(f"{src_prefix}.weight", f"{dst_prefix}.weight"),
(f"{src_prefix}.bias", f"{dst_prefix}.bias"),
]
def rename_keys_for_self_attn(src_prefix: str, dst_prefix: str):
self_attn_keys = []
self_attn_keys.extend(
rename_keys_for_weight_bias(f"{src_prefix}.attention_weights", f"{dst_prefix}.attention_weights")
)
self_attn_keys.extend(
rename_keys_for_weight_bias(f"{src_prefix}.output_proj", f"{dst_prefix}.output_proj")
)
self_attn_keys.extend(
rename_keys_for_weight_bias(f"{src_prefix}.sampling_offsets", f"{dst_prefix}.sampling_offsets")
)
self_attn_keys.extend(rename_keys_for_weight_bias(f"{src_prefix}.value_proj", f"{dst_prefix}.value_proj"))
return self_attn_keys
def rename_keys_for_encoder_layer(src_prefix: str, dst_prefix: str):
encoder_keys = []
encoder_keys.extend(rename_keys_for_weight_bias(f"{src_prefix}.linear1", f"{dst_prefix}.fc1"))
encoder_keys.extend(rename_keys_for_weight_bias(f"{src_prefix}.linear2", f"{dst_prefix}.fc2"))
encoder_keys.extend(
rename_keys_for_weight_bias(f"{src_prefix}.norm1", f"{dst_prefix}.self_attn_layer_norm")
)
encoder_keys.extend(rename_keys_for_weight_bias(f"{src_prefix}.norm2", f"{dst_prefix}.final_layer_norm"))
encoder_keys.extend(rename_keys_for_self_attn(f"{src_prefix}.self_attn", f"{dst_prefix}.self_attn"))
return encoder_keys
# convolution layer for final features
renamed_keys = [
(f"{src_prefix}.adapter_1.weight", f"{dst_prefix}.adapter_1.0.weight"),
(f"{src_prefix}.adapter_1.norm.weight", f"{dst_prefix}.adapter_1.1.weight"),
(f"{src_prefix}.adapter_1.norm.bias", f"{dst_prefix}.adapter_1.1.bias"),
]
renamed_keys.extend(
[
(f"{src_prefix}.layer_1.weight", f"{dst_prefix}.layer_1.0.weight"),
(f"{src_prefix}.layer_1.norm.weight", f"{dst_prefix}.layer_1.1.weight"),
(f"{src_prefix}.layer_1.norm.bias", f"{dst_prefix}.layer_1.1.bias"),
]
)
# proj layers
for i in range(3):
for j in range(2):
renamed_keys.extend(
[
(f"{src_prefix}.input_proj.{i}.{j}.weight", f"{dst_prefix}.input_projections.{i}.{j}.weight"),
(f"{src_prefix}.input_proj.{i}.{j}.bias", f"{dst_prefix}.input_projections.{i}.{j}.bias"),
]
)
renamed_keys.extend([(f"{src_prefix}.transformer.level_embed", f"{dst_prefix}.level_embed")])
# layers
for layer_idx in range(self.config.encoder_layers):
renamed_keys.extend(
rename_keys_for_encoder_layer(
f"{src_prefix}.transformer.encoder.layers.{layer_idx}", f"{dst_prefix}.encoder.layers.{layer_idx}"
)
)
# proj
renamed_keys.extend(
[
(f"{src_prefix}.mask_features.weight", f"{dst_prefix}.mask_projection.weight"),
(f"{src_prefix}.mask_features.bias", f"{dst_prefix}.mask_projection.bias"),
]
)
self.pop_all(renamed_keys, dst_state_dict, src_state_dict)
# Transformer Decoder
def rename_keys_in_masked_attention_decoder(self, dst_state_dict: StateDict, src_state_dict: StateDict):
dst_prefix: str = "transformer_module.decoder"
src_prefix: str = "sem_seg_head.predictor"
rename_keys = []
for i in range(self.config.decoder_layers - 1):
rename_keys.append(
(
f"{src_prefix}.transformer_self_attention_layers.{i}.self_attn.out_proj.weight",
f"{dst_prefix}.layers.{i}.self_attn.out_proj.weight",
)
)
rename_keys.append(
(
f"{src_prefix}.transformer_self_attention_layers.{i}.self_attn.out_proj.bias",
f"{dst_prefix}.layers.{i}.self_attn.out_proj.bias",
)
)
rename_keys.append(
(
f"{src_prefix}.transformer_self_attention_layers.{i}.norm.weight",
f"{dst_prefix}.layers.{i}.self_attn_layer_norm.weight",
)
)
rename_keys.append(
(
f"{src_prefix}.transformer_self_attention_layers.{i}.norm.bias",
f"{dst_prefix}.layers.{i}.self_attn_layer_norm.bias",
)
)
rename_keys.append(
(
f"{src_prefix}.transformer_cross_attention_layers.{i}.multihead_attn.in_proj_weight",
f"{dst_prefix}.layers.{i}.cross_attn.in_proj_weight",
)
)
rename_keys.append(
(
f"{src_prefix}.transformer_cross_attention_layers.{i}.multihead_attn.in_proj_bias",
f"{dst_prefix}.layers.{i}.cross_attn.in_proj_bias",
)
)
rename_keys.append(
(
f"{src_prefix}.transformer_cross_attention_layers.{i}.multihead_attn.out_proj.weight",
f"{dst_prefix}.layers.{i}.cross_attn.out_proj.weight",
)
)
rename_keys.append(
(
f"{src_prefix}.transformer_cross_attention_layers.{i}.multihead_attn.out_proj.bias",
f"{dst_prefix}.layers.{i}.cross_attn.out_proj.bias",
)
)
rename_keys.append(
(
f"{src_prefix}.transformer_cross_attention_layers.{i}.norm.weight",
f"{dst_prefix}.layers.{i}.cross_attn_layer_norm.weight",
)
)
rename_keys.append(
(
f"{src_prefix}.transformer_cross_attention_layers.{i}.norm.bias",
f"{dst_prefix}.layers.{i}.cross_attn_layer_norm.bias",
)
)
rename_keys.append(
(f"{src_prefix}.transformer_ffn_layers.{i}.linear1.weight", f"{dst_prefix}.layers.{i}.fc1.weight")
)
rename_keys.append(
(f"{src_prefix}.transformer_ffn_layers.{i}.linear1.bias", f"{dst_prefix}.layers.{i}.fc1.bias")
)
rename_keys.append(
(f"{src_prefix}.transformer_ffn_layers.{i}.linear2.weight", f"{dst_prefix}.layers.{i}.fc2.weight")
)
rename_keys.append(
(f"{src_prefix}.transformer_ffn_layers.{i}.linear2.bias", f"{dst_prefix}.layers.{i}.fc2.bias")
)
rename_keys.append(
(
f"{src_prefix}.transformer_ffn_layers.{i}.norm.weight",
f"{dst_prefix}.layers.{i}.final_layer_norm.weight",
)
)
rename_keys.append(
(
f"{src_prefix}.transformer_ffn_layers.{i}.norm.bias",
f"{dst_prefix}.layers.{i}.final_layer_norm.bias",
)
)
return rename_keys
def replace_masked_attention_decoder(self, dst_state_dict: StateDict, src_state_dict: StateDict):
dst_prefix: str = "transformer_module.decoder"
src_prefix: str = "sem_seg_head.predictor"
renamed_keys = self.rename_keys_in_masked_attention_decoder(dst_state_dict, src_state_dict)
# add more
renamed_keys.extend(
[
(f"{src_prefix}.decoder_norm.weight", f"{dst_prefix}.layernorm.weight"),
(f"{src_prefix}.decoder_norm.bias", f"{dst_prefix}.layernorm.bias"),
]
)
mlp_len = 3
for i in range(mlp_len):
renamed_keys.extend(
[
(
f"{src_prefix}.mask_embed.layers.{i}.weight",
f"{dst_prefix}.mask_predictor.mask_embedder.{i}.0.weight",
),
(
f"{src_prefix}.mask_embed.layers.{i}.bias",
f"{dst_prefix}.mask_predictor.mask_embedder.{i}.0.bias",
),
]
)
self.pop_all(renamed_keys, dst_state_dict, src_state_dict)
def replace_keys_qkv_transformer_decoder(self, dst_state_dict: StateDict, src_state_dict: StateDict):
dst_prefix: str = "transformer_module.decoder.layers"
src_prefix: str = "sem_seg_head.predictor"
for i in range(self.config.decoder_layers - 1):
# read in weights + bias of input projection layer of self-attention
in_proj_weight = src_state_dict.pop(
f"{src_prefix}.transformer_self_attention_layers.{i}.self_attn.in_proj_weight"
)
in_proj_bias = src_state_dict.pop(
f"{src_prefix}.transformer_self_attention_layers.{i}.self_attn.in_proj_bias"
)
# next, add query, keys and values (in that order) to the state dict
dst_state_dict[f"{dst_prefix}.{i}.self_attn.q_proj.weight"] = in_proj_weight[:256, :]
dst_state_dict[f"{dst_prefix}.{i}.self_attn.q_proj.bias"] = in_proj_bias[:256]
dst_state_dict[f"{dst_prefix}.{i}.self_attn.k_proj.weight"] = in_proj_weight[256:512, :]
dst_state_dict[f"{dst_prefix}.{i}.self_attn.k_proj.bias"] = in_proj_bias[256:512]
dst_state_dict[f"{dst_prefix}.{i}.self_attn.v_proj.weight"] = in_proj_weight[-256:, :]
dst_state_dict[f"{dst_prefix}.{i}.self_attn.v_proj.bias"] = in_proj_bias[-256:]
def replace_transformer_module(self, dst_state_dict: StateDict, src_state_dict: StateDict):
dst_prefix: str = "transformer_module"
src_prefix: str = "sem_seg_head.predictor"
self.replace_masked_attention_decoder(dst_state_dict, src_state_dict)
renamed_keys = [
(f"{src_prefix}.query_embed.weight", f"{dst_prefix}.queries_embedder.weight"),
(f"{src_prefix}.query_feat.weight", f"{dst_prefix}.queries_features.weight"),
(f"{src_prefix}.level_embed.weight", f"{dst_prefix}.level_embed.weight"),
]
self.pop_all(renamed_keys, dst_state_dict, src_state_dict)
self.replace_keys_qkv_transformer_decoder(dst_state_dict, src_state_dict)
def replace_universal_segmentation_module(self, dst_state_dict: StateDict, src_state_dict: StateDict):
dst_prefix: str = ""
src_prefix: str = "sem_seg_head.predictor"
renamed_keys = [
(f"{src_prefix}.class_embed.weight", f"{dst_prefix}class_predictor.weight"),
(f"{src_prefix}.class_embed.bias", f"{dst_prefix}class_predictor.bias"),
]
logger.info(f"Replacing keys {pformat(renamed_keys)}")
self.pop_all(renamed_keys, dst_state_dict, src_state_dict)
def convert(self, mask2former: Mask2FormerModel) -> Mask2FormerModel:
dst_state_dict = TrackedStateDict(mask2former.state_dict())
src_state_dict = self.original_model.state_dict()
self.replace_pixel_module(dst_state_dict, src_state_dict)
self.replace_transformer_module(dst_state_dict, src_state_dict)
logger.info(f"Missed keys are {pformat(dst_state_dict.diff())}")
logger.info(f"Not copied keys are {pformat(src_state_dict.keys())}")
logger.info("🙌 Done")
state_dict = {key: dst_state_dict[key] for key in dst_state_dict.to_track.keys()}
mask2former.load_state_dict(state_dict)
return mask2former
def convert_universal_segmentation(
self, mask2former: Mask2FormerForUniversalSegmentation
) -> Mask2FormerForUniversalSegmentation:
dst_state_dict = TrackedStateDict(mask2former.state_dict())
src_state_dict = self.original_model.state_dict()
self.replace_universal_segmentation_module(dst_state_dict, src_state_dict)
state_dict = {key: dst_state_dict[key] for key in dst_state_dict.to_track.keys()}
mask2former.load_state_dict(state_dict)
return mask2former
@staticmethod
def using_dirs(checkpoints_dir: Path, config_dir: Path) -> Iterator[Tuple[object, Path, Path]]:
checkpoints: List[Path] = checkpoints_dir.glob("**/*.pkl")
for checkpoint in checkpoints:
logger.info(f"💪 Converting {checkpoint.stem}")
# find associated config file
# dataset_name e.g 'coco'
dataset_name = checkpoint.parents[2].stem
if dataset_name == "ade":
dataset_name = dataset_name.replace("ade", "ade20k")
# task type e.g 'instance-segmentation'
segmentation_task = checkpoint.parents[1].stem
# config file corresponding to checkpoint
config_file_name = f"{checkpoint.parents[0].stem}.yaml"
config: Path = config_dir / dataset_name / segmentation_task / "swin" / config_file_name
yield config, checkpoint
def test(
original_model,
our_model: Mask2FormerForUniversalSegmentation,
image_processor: Mask2FormerImageProcessor,
tolerance: float,
):
with torch.no_grad():
original_model = original_model.eval()
our_model = our_model.eval()
im = prepare_img()
x = image_processor(images=im, return_tensors="pt")["pixel_values"]
original_model_backbone_features = original_model.backbone(x.clone())
our_model_output: Mask2FormerModelOutput = our_model.model(x.clone(), output_hidden_states=True)
# Test backbone
for original_model_feature, our_model_feature in zip(
original_model_backbone_features.values(), our_model_output.encoder_hidden_states
):
assert torch.allclose(
original_model_feature, our_model_feature, atol=tolerance
), "The backbone features are not the same."
# Test pixel decoder
mask_features, _, multi_scale_features = original_model.sem_seg_head.pixel_decoder.forward_features(
original_model_backbone_features
)
for original_model_feature, our_model_feature in zip(
multi_scale_features, our_model_output.pixel_decoder_hidden_states
):
assert torch.allclose(
original_model_feature, our_model_feature, atol=tolerance
), "The pixel decoder feature are not the same"
# Let's test the full model
tr_complete = T.Compose(
[T.Resize((384, 384)), T.ToTensor()],
)
y = (tr_complete(im) * 255.0).to(torch.int).float()
# modify original Mask2Former code to return mask and class logits
original_class_logits, original_mask_logits = original_model([{"image": y.clone().squeeze(0)}])
our_model_out: Mask2FormerForUniversalSegmentationOutput = our_model(x.clone())
our_mask_logits = our_model_out.masks_queries_logits
our_class_logits = our_model_out.class_queries_logits
assert original_mask_logits.shape == our_mask_logits.shape, "Output masks shapes are not matching."
assert original_class_logits.shape == our_class_logits.shape, "Output class logits shapes are not matching."
assert torch.allclose(
original_class_logits, our_class_logits, atol=tolerance
), "The class logits are not the same."
assert torch.allclose(
original_mask_logits, our_mask_logits, atol=tolerance
), "The predicted masks are not the same."
logger.info("✅ Test passed!")
def get_model_name(checkpoint_file: Path):
# model_name_raw is something like maskformer2_swin_small_bs16_50ep
model_name_raw: str = checkpoint_file.parents[0].stem
# `segmentation_task_type` must be one of the following: `instance-segmentation`, `panoptic-segmentation`, `semantic-segmentation`
segmentation_task_name: str = checkpoint_file.parents[1].stem
if segmentation_task_name not in ["instance-segmentation", "panoptic-segmentation", "semantic-segmentation"]:
raise ValueError(
f"{segmentation_task_name} must be wrong since acceptable values are: instance-segmentation,"
" panoptic-segmentation, semantic-segmentation."
)
# dataset name must be one of the following: `coco`, `ade`, `cityscapes`, `mapillary-vistas`
dataset_name: str = checkpoint_file.parents[2].stem
if dataset_name not in ["coco", "ade", "cityscapes", "mapillary-vistas"]:
raise ValueError(
f"{dataset_name} must be wrong since we didn't find 'coco' or 'ade' or 'cityscapes' or 'mapillary-vistas'"
" in it "
)
backbone = "swin"
backbone_types = ["tiny", "small", "base_IN21k", "base", "large"]
backbone_type = list(filter(lambda x: x in model_name_raw, backbone_types))[0].replace("_", "-")
model_name = f"mask2former-{backbone}-{backbone_type}-{dataset_name}-{segmentation_task_name.split('-')[0]}"
return model_name
if __name__ == "__main__":
parser = ArgumentParser(
description="Command line to convert the original mask2formers (with swin backbone) to our implementations."
)
parser.add_argument(
"--checkpoints_dir",
type=Path,
help=(
"A directory containing the model's checkpoints. The directory has to have the following structure:"
" <DIR_NAME>/<DATASET_NAME>/<SEGMENTATION_TASK_NAME>/<CONFIG_NAME>.pkl"
),
)
parser.add_argument(
"--configs_dir",
type=Path,
help=(
"A directory containing the model's configs, see detectron2 doc. The directory has to have the following"
" structure: <DIR_NAME>/<DATASET_NAME>/<SEGMENTATION_TASK_NAME>/<CONFIG_NAME>.yaml"
),
)
parser.add_argument(
"--mask2former_dir",
required=True,
type=Path,
help=(
"A path to Mask2Former's original implementation directory. You can download from here:"
" https://github.com/facebookresearch/Mask2Former"
),
)
args = parser.parse_args()
checkpoints_dir: Path = args.checkpoints_dir
config_dir: Path = args.configs_dir
mask2former_dir: Path = args.mask2former_dir
# append the path to the parents to mask2former dir
sys.path.append(str(mask2former_dir.parent))
# import original Mask2Former config and model from original source code repo
from Mask2Former.mask2former.config import add_maskformer2_config
from Mask2Former.mask2former.maskformer_model import MaskFormer as OriginalMask2Former
for config_file, checkpoint_file in OriginalMask2FormerCheckpointToOursConverter.using_dirs(
checkpoints_dir, config_dir
):
model_name = get_model_name(checkpoint_file)
image_processor = OriginalMask2FormerConfigToImageProcessorConverter()(
setup_cfg(Args(config_file=config_file))
)
image_processor.size = {"height": 384, "width": 384}
original_config = setup_cfg(Args(config_file=config_file))
mask2former_kwargs = OriginalMask2Former.from_config(original_config)
original_model = OriginalMask2Former(**mask2former_kwargs).eval()
DetectionCheckpointer(original_model).load(str(checkpoint_file))
config: Mask2FormerConfig = OriginalMask2FormerConfigToOursConverter()(original_config)
mask2former = Mask2FormerModel(config=config).eval()
converter = OriginalMask2FormerCheckpointToOursConverter(original_model, config)
mask2former = converter.convert(mask2former)
mask2former_for_segmentation = Mask2FormerForUniversalSegmentation(config=config).eval()
mask2former_for_segmentation.model = mask2former
mask2former_for_segmentation = converter.convert_universal_segmentation(mask2former_for_segmentation)
tolerance = 3e-1
high_tolerance_models = [
"mask2former-swin-base-IN21k-coco-instance",
"mask2former-swin-base-coco-instance",
"mask2former-swin-small-cityscapes-semantic",
]
if model_name in high_tolerance_models:
tolerance = 3e-1
logger.info(f"🪄 Testing {model_name}...")
test(original_model, mask2former_for_segmentation, image_processor, tolerance)
logger.info(f"🪄 Pushing {model_name} to hub...")
image_processor.push_to_hub(model_name)
mask2former_for_segmentation.push_to_hub(model_name)
| 45,674 | 43.779412 | 140 | py |
transformers | transformers-main/src/transformers/models/mask2former/modeling_mask2former.py | # coding=utf-8
# Copyright 2022 Meta Platforms, Inc. and The HuggingFace Inc. team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
""" PyTorch Mask2Former model."""
import math
import warnings
from dataclasses import dataclass
from typing import Dict, List, Optional, Tuple
import numpy as np
import torch
from torch import Tensor, nn
from ... import AutoBackbone
from ...activations import ACT2FN
from ...file_utils import (
ModelOutput,
add_start_docstrings,
add_start_docstrings_to_model_forward,
is_scipy_available,
replace_return_docstrings,
requires_backends,
)
from ...modeling_outputs import BaseModelOutput, BaseModelOutputWithCrossAttentions
from ...modeling_utils import PreTrainedModel
from ...utils import logging
from .configuration_mask2former import Mask2FormerConfig
if is_scipy_available():
from scipy.optimize import linear_sum_assignment
logger = logging.get_logger(__name__)
_CONFIG_FOR_DOC = "Mask2FormerConfig"
_CHECKPOINT_FOR_DOC = "facebook/mask2former-swin-small-coco-instance"
_IMAGE_PROCESSOR_FOR_DOC = "Mask2FormerImageProcessor"
MASK2FORMER_PRETRAINED_MODEL_ARCHIVE_LIST = [
"facebook/mask2former-swin-small-coco-instance",
# See all mask2former models at https://huggingface.co/models?filter=mask2former
]
@dataclass
class Mask2FormerPixelDecoderOutput(ModelOutput):
"""
Mask2Former's pixel decoder module output, practically a Multi-Scale Deformable Attention based decoder. It returns
the mask features and the multiscale features.
Args:
multi_scale_features (`tuple(torch.FloatTensor)`):
Tuple of multi-scale features of scales [1/8, 1/16, 1/32] and shape `(batch_size, num_channels, height,
width)`from the Multi-Scale Deformable Attenntion based Pixel Decoder.
mask_features (`torch.FloatTensor`):
Tensor of shape `(batch_size, num_channels, height, width)`, 1/4 scale features from the last Pixel Decoder
Layer.
attentions (`tuple(torch.FloatTensor)`, *optional*):
Tuple of `torch.FloatTensor` (one for each layer) of shape `(batch_size, num_heads, sequence_length,
sequence_length)`. Attentions weights from pixel decoder. Returned when `output_attentions=True` is passed
or when `config.output_attentions=True`
"""
multi_scale_features: Tuple[torch.FloatTensor] = None
mask_features: torch.FloatTensor = None
attentions: Optional[Tuple[torch.FloatTensor]] = None
@dataclass
class Mask2FormerMaskedAttentionDecoderOutput(BaseModelOutputWithCrossAttentions):
"""
Base class for outputs of the Transformer decoder. This class adds two attributes to
BaseModelOutputWithCrossAttentions for mask predictions logits and a tuple of intermediate decoder activations,
i.e. the output of each decoder layer, each of them gone through a layernorm.
Args:
last_hidden_state (`torch.FloatTensor` of shape `(batch_size, sequence_length, hidden_size)`):
Sequence of hidden-states at the output of the last layer of the model.
hidden_states (`tuple(torch.FloatTensor)`, *optional*):
Tuple of `torch.FloatTensor` (one for the output of the embeddings + one for the output of each layer) of
shape `(batch_size, sequence_length, hidden_size)`. Hidden-states of the model at the output of each layer
plus the initial embedding outputs. Returned when `output_hidden_states=True`.
attentions (`tuple(torch.FloatTensor)`, *optional*):
Tuple of `torch.FloatTensor` (one for each layer) of shape `(batch_size, num_heads, sequence_length,
sequence_length)`. Attentions weights after the attention softmax, used to compute the weighted average in
the self-attention heads. Returned when `output_attentions=True`.
masks_queries_logits (`tuple(torch.FloatTensor)` of shape `(batch_size, num_queries, height, width)`):
Tuple of mask predictions from all layers of the transformer decoder.
intermediate_hidden_states (`tuple(torch.FloatTensor)` of shape `(num_queries, 1, hidden_size)`):
Intermediate decoder activations, i.e. the output of each decoder layer, each of them gone through a
layernorm.
"""
last_hidden_state: torch.FloatTensor = None
hidden_states: Optional[Tuple[torch.FloatTensor]] = None
attentions: Optional[torch.FloatTensor] = None
masks_queries_logits: Tuple[torch.FloatTensor] = None
intermediate_hidden_states: Tuple[torch.FloatTensor] = None
@dataclass
class Mask2FormerPixelLevelModuleOutput(ModelOutput):
"""
Mask2Former's pixel level module output. It returns the output of the encoder (optional) and all hidden states
(multi-scale features) from the `decoder`. By default, the `encoder` is a Swin Backbone and the `decoder` is a
Multi-Scale Deformable Attention based decoder.
The `decoder_last_hidden_state` are the **per-pixel embeddings** while `decoder_hidden_states` refer to multi-scale
feature maps produced using **multi-scaling strategy** defined in the paper.
Args:
encoder_last_hidden_state (`torch.FloatTensor`):
Last hidden states (final feature map of shape `(batch_size, num_channels, height, width)`) of the last
stage of the encoder.
encoder_hidden_states (`tuple(torch.FloatTensor)`, *optional*):
Tuple of `torch.FloatTensor` of shape `(batch_size, num_channels, height, width)`. Hidden states (also
called feature maps) of the model at the output of each stage. Returned if output_hidden_states is set to
True.
decoder_last_hidden_state (`torch.FloatTensor` of shape `(batch_size, num_channels, height, width)):
1/4 scale features from the last Pixel Decoder Layer.
decoder_hidden_states (`tuple(torch.FloatTensor)`):
Tuple of `torch.FloatTensor` of shape `(batch_size, num_channels, height, width)`. Hidden states (also
called feature maps) of the model at the output of each stage.
"""
encoder_last_hidden_state: torch.FloatTensor = None
encoder_hidden_states: Optional[Tuple[torch.FloatTensor]] = None
decoder_last_hidden_state: torch.FloatTensor = None
decoder_hidden_states: Tuple[torch.FloatTensor] = None
@dataclass
class Mask2FormerModelOutput(ModelOutput):
"""
Class for outputs of [`Mask2FormerModel`]. This class returns all the needed hidden states to compute the logits.
Args:
encoder_last_hidden_state (`torch.FloatTensor` of shape `(batch_size, num_channels, height, width)`, *optional*):
Last hidden states (final feature map) of the last stage of the encoder model (backbone). Returned when
`output_hidden_states=True` is passed.
encoder_hidden_states (`tuple(torch.FloatTensor)`, *optional*):
Tuple of `torch.FloatTensor` (one for the output of the embeddings + one for the output of each stage) of
shape `(batch_size, num_channels, height, width)`. Hidden-states (also called feature maps) of the encoder
model at the output of each stage. Returned when `output_hidden_states=True` is passed.
pixel_decoder_last_hidden_state (`torch.FloatTensor` of shape `(batch_size, num_channels, height, width)`, *optional*):
Last hidden states (final feature map) of the last stage of the pixel decoder model.
pixel_decoder_hidden_states (`tuple(torch.FloatTensor)`, , *optional*, returned when `output_hidden_states=True` is passed or when `config.output_hidden_states=True`):
Tuple of `torch.FloatTensor` (one for the output of the embeddings + one for the output of each stage) of
shape `(batch_size, num_channels, height, width)`. Hidden-states (also called feature maps) of the pixel
decoder model at the output of each stage. Returned when `output_hidden_states=True` is passed.
transformer_decoder_last_hidden_state (`tuple(torch.FloatTensor)`):
Final output of the transformer decoder `(batch_size, sequence_length, hidden_size)`.
transformer_decoder_hidden_states (`tuple(torch.FloatTensor)`, *optional*):
Tuple of `torch.FloatTensor` (one for the output of the embeddings + one for the output of each stage) of
shape `(batch_size, sequence_length, hidden_size)`. Hidden-states (also called feature maps) of the
transformer decoder at the output of each stage. Returned when `output_hidden_states=True` is passed.
transformer_decoder_intermediate_states (`tuple(torch.FloatTensor)` of shape `(num_queries, 1, hidden_size)`):
Intermediate decoder activations, i.e. the output of each decoder layer, each of them gone through a
layernorm.
masks_queries_logits (`tuple(torch.FloatTensor)` of shape `(batch_size, num_queries, height, width)`)
Mask Predictions from each layer in the transformer decoder.
attentions (`tuple(tuple(torch.FloatTensor))`, *optional*, returned when `output_attentions=True` is passed):
Tuple of `tuple(torch.FloatTensor)` (one for each layer) of shape `(batch_size, num_heads, sequence_length,
sequence_length)`. Self attentions weights from transformer decoder.
"""
encoder_last_hidden_state: torch.FloatTensor = None
pixel_decoder_last_hidden_state: torch.FloatTensor = None
transformer_decoder_last_hidden_state: torch.FloatTensor = None
encoder_hidden_states: Optional[Tuple[torch.FloatTensor]] = None
pixel_decoder_hidden_states: Optional[Tuple[torch.FloatTensor]] = None
transformer_decoder_hidden_states: Optional[Tuple[torch.FloatTensor]] = None
transformer_decoder_intermediate_states: Tuple[torch.FloatTensor] = None
masks_queries_logits: Tuple[torch.FloatTensor] = None
attentions: Optional[Tuple[torch.FloatTensor]] = None
@dataclass
class Mask2FormerForUniversalSegmentationOutput(ModelOutput):
"""
Class for outputs of [`Mask2FormerForUniversalSegmentationOutput`].
This output can be directly passed to [`~Mask2FormerImageProcessor.post_process_semantic_segmentation`] or
[`~Mask2FormerImageProcessor.post_process_instance_segmentation`] or
[`~Mask2FormerImageProcessor.post_process_panoptic_segmentation`] to compute final segmentation maps. Please, see
[`~Mask2FormerImageProcessor] for details regarding usage.
Args:
loss (`torch.Tensor`, *optional*):
The computed loss, returned when labels are present.
class_queries_logits (`torch.FloatTensor`):
A tensor of shape `(batch_size, num_queries, num_labels + 1)` representing the proposed classes for each
query. Note the `+ 1` is needed because we incorporate the null class.
masks_queries_logits (`torch.FloatTensor`):
A tensor of shape `(batch_size, num_queries, height, width)` representing the proposed masks for each
query.
auxiliary_logits (`List[Dict(str, torch.FloatTensor)]`, *optional*):
List of class and mask predictions from each layer of the transformer decoder.
encoder_last_hidden_state (`torch.FloatTensor` of shape `(batch_size, num_channels, height, width)`):
Last hidden states (final feature map) of the last stage of the encoder model (backbone).
encoder_hidden_states (`tuple(torch.FloatTensor)`, *optional*, returned when `output_hidden_states=True` is passed or when `config.output_hidden_states=True`):
Tuple of `torch.FloatTensor` (one for the output of the embeddings + one for the output of each stage) of
shape `(batch_size, num_channels, height, width)`. Hidden-states (also called feature maps) of the encoder
model at the output of each stage.
pixel_decoder_last_hidden_state (`torch.FloatTensor` of shape `(batch_size, num_channels, height, width)`):
Last hidden states (final feature map) of the last stage of the pixel decoder model.
pixel_decoder_hidden_states (`tuple(torch.FloatTensor)`, *optional*, returned when `output_hidden_states=True` is passed or when `config.output_hidden_states=True`):
Tuple of `torch.FloatTensor` (one for the output of the embeddings + one for the output of each stage) of
shape `(batch_size, num_channels, height, width)`. Hidden-states (also called feature maps) of the pixel
decoder model at the output of each stage.
transformer_decoder_last_hidden_state (`tuple(torch.FloatTensor)`):
Final output of the transformer decoder `(batch_size, sequence_length, hidden_size)`.
transformer_decoder_hidden_states (`tuple(torch.FloatTensor)`, *optional*, returned when `output_hidden_states=True` is passed or when `config.output_hidden_states=True`):
Tuple of `torch.FloatTensor` (one for the output of the embeddings + one for the output of each stage) of
shape `(batch_size, sequence_length, hidden_size)`. Hidden-states (also called feature maps) of the
transformer decoder at the output of each stage.
attentions (`tuple(tuple(torch.FloatTensor))`, *optional*, returned when `output_attentions=True` is passed or when `config.output_attentions=True`):
Tuple of `tuple(torch.FloatTensor)` (one for each layer) of shape `(batch_size, num_heads, sequence_length,
sequence_length)`. Self and Cross Attentions weights from transformer decoder.
"""
loss: Optional[torch.FloatTensor] = None
class_queries_logits: torch.FloatTensor = None
masks_queries_logits: torch.FloatTensor = None
auxiliary_logits: Optional[List[Dict[str, torch.FloatTensor]]] = None
encoder_last_hidden_state: torch.FloatTensor = None
pixel_decoder_last_hidden_state: torch.FloatTensor = None
transformer_decoder_last_hidden_state: torch.FloatTensor = None
encoder_hidden_states: Optional[Tuple[torch.FloatTensor]] = None
pixel_decoder_hidden_states: Optional[Tuple[torch.FloatTensor]] = None
transformer_decoder_hidden_states: Optional[torch.FloatTensor] = None
attentions: Optional[Tuple[torch.FloatTensor]] = None
# Copied from transformers.models.detr.modeling_detr._expand_mask
def _expand_mask(mask: torch.Tensor, dtype: torch.dtype, target_len: Optional[int] = None):
"""
Expands attention_mask from `[batch_size, seq_len]` to `[batch_size, 1, target_seq_len, source_seq_len]`.
"""
batch_size, source_len = mask.size()
target_len = target_len if target_len is not None else source_len
expanded_mask = mask[:, None, None, :].expand(batch_size, 1, target_len, source_len).to(dtype)
inverted_mask = 1.0 - expanded_mask
return inverted_mask.masked_fill(inverted_mask.bool(), torch.finfo(dtype).min)
# Adapted from https://github.com/facebookresearch/detectron2/blob/main/projects/PointRend/point_rend/point_features.py
def sample_point(
input_features: torch.Tensor, point_coordinates: torch.Tensor, add_dim=False, **kwargs
) -> torch.Tensor:
"""
A wrapper around `torch.nn.functional.grid_sample` to support 3D point_coordinates tensors.
Args:
input_features (`torch.Tensor` of shape (batch_size, channels, height, width)):
A tensor that contains features map on a height * width grid
point_coordinates (`torch.Tensor` of shape (batch_size, num_points, 2) or (batch_size, grid_height, grid_width,:
2)):
A tensor that contains [0, 1] * [0, 1] normalized point coordinates
add_dim (`bool`):
boolean value to keep track of added dimension
Returns:
point_features (`torch.Tensor` of shape (batch_size, channels, num_points) or (batch_size, channels,
height_grid, width_grid):
A tensor that contains features for points in `point_coordinates`.
"""
if point_coordinates.dim() == 3:
add_dim = True
point_coordinates = point_coordinates.unsqueeze(2)
# use nn.function.grid_sample to get features for points in `point_coordinates` via bilinear interpolation
point_features = torch.nn.functional.grid_sample(input_features, 2.0 * point_coordinates - 1.0, **kwargs)
if add_dim:
point_features = point_features.squeeze(3)
return point_features
# Copied from transformers.models.maskformer.modeling_maskformer.dice_loss
def dice_loss(inputs: Tensor, labels: Tensor, num_masks: int) -> Tensor:
r"""
Compute the DICE loss, similar to generalized IOU for masks as follows:
$$ \mathcal{L}_{\text{dice}(x, y) = 1 - \frac{2 * x \cap y }{x \cup y + 1}} $$
In practice, since `labels` is a binary mask, (only 0s and 1s), dice can be computed as follow
$$ \mathcal{L}_{\text{dice}(x, y) = 1 - \frac{2 * x * y }{x + y + 1}} $$
Args:
inputs (`torch.Tensor`):
A tensor representing a mask.
labels (`torch.Tensor`):
A tensor with the same shape as inputs. Stores the binary classification labels for each element in inputs
(0 for the negative class and 1 for the positive class).
num_masks (`int`):
The number of masks present in the current batch, used for normalization.
Returns:
`torch.Tensor`: The computed loss.
"""
probs = inputs.sigmoid().flatten(1)
numerator = 2 * (probs * labels).sum(-1)
denominator = probs.sum(-1) + labels.sum(-1)
loss = 1 - (numerator + 1) / (denominator + 1)
loss = loss.sum() / num_masks
return loss
def sigmoid_cross_entropy_loss(inputs: torch.Tensor, labels: torch.Tensor, num_masks: int) -> torch.Tensor:
r"""
Args:
inputs (`torch.Tensor`):
A float tensor of arbitrary shape.
labels (`torch.Tensor`):
A tensor with the same shape as inputs. Stores the binary classification labels for each element in inputs
(0 for the negative class and 1 for the positive class).
Returns:
loss (`torch.Tensor`): The computed loss.
"""
criterion = nn.BCEWithLogitsLoss(reduction="none")
cross_entropy_loss = criterion(inputs, labels)
loss = cross_entropy_loss.mean(1).sum() / num_masks
return loss
# Copied from transformers.models.maskformer.modeling_maskformer.pair_wise_dice_loss
def pair_wise_dice_loss(inputs: Tensor, labels: Tensor) -> Tensor:
"""
A pair wise version of the dice loss, see `dice_loss` for usage.
Args:
inputs (`torch.Tensor`):
A tensor representing a mask
labels (`torch.Tensor`):
A tensor with the same shape as inputs. Stores the binary classification labels for each element in inputs
(0 for the negative class and 1 for the positive class).
Returns:
`torch.Tensor`: The computed loss between each pairs.
"""
inputs = inputs.sigmoid().flatten(1)
numerator = 2 * torch.einsum("nc,mc->nm", inputs, labels)
# using broadcasting to get a [num_queries, NUM_CLASSES] matrix
denominator = inputs.sum(-1)[:, None] + labels.sum(-1)[None, :]
loss = 1 - (numerator + 1) / (denominator + 1)
return loss
def pair_wise_sigmoid_cross_entropy_loss(inputs: torch.Tensor, labels: torch.Tensor) -> torch.Tensor:
r"""
A pair wise version of the cross entropy loss, see `sigmoid_cross_entropy_loss` for usage.
Args:
inputs (`torch.Tensor`):
A tensor representing a mask.
labels (`torch.Tensor`):
A tensor with the same shape as inputs. Stores the binary classification labels for each element in inputs
(0 for the negative class and 1 for the positive class).
Returns:
loss (`torch.Tensor`): The computed loss between each pairs.
"""
height_and_width = inputs.shape[1]
criterion = nn.BCEWithLogitsLoss(reduction="none")
cross_entropy_loss_pos = criterion(inputs, torch.ones_like(inputs))
cross_entropy_loss_neg = criterion(inputs, torch.zeros_like(inputs))
loss = torch.einsum("nc,mc->nm", cross_entropy_loss_pos, labels) + torch.einsum(
"nc,mc->nm", cross_entropy_loss_neg, (1 - labels)
)
loss = loss / height_and_width
return loss
# Adapted from https://github.com/facebookresearch/Mask2Former/blob/main/mask2former/modeling/matcher.py
class Mask2FormerHungarianMatcher(nn.Module):
"""This class computes an assignment between the labels and the predictions of the network.
For efficiency reasons, the labels don't include the no_object. Because of this, in general, there are more
predictions than labels. In this case, we do a 1-to-1 matching of the best predictions, while the others are
un-matched (and thus treated as non-objects).
"""
def __init__(
self, cost_class: float = 1.0, cost_mask: float = 1.0, cost_dice: float = 1.0, num_points: int = 12544
):
"""Creates the matcher
Params:
cost_class (`float`, *optional*, defaults to 1.0):
Relative weight of the classification error in the matching cost.
cost_mask (`float`, *optional*, defaults to 1.0):
This is the relative weight of the focal loss of the binary mask in the matching cost.
cost_dice (`float`, *optional*, defaults to 1.0):
This is the relative weight of the dice loss of the binary mask in the matching cost.
num_points (`int`, *optional*, defaults to 12544):
No. of points to sample on which the mask loss will be calculated. The same set of K points are
uniformly sampled for all prediction and ground truth masks to construct the cost matrix for bipartite
matching.
"""
super().__init__()
if cost_class == 0 and cost_mask == 0 and cost_dice == 0:
raise ValueError("All costs cant be 0")
self.num_points = num_points
self.cost_class = cost_class
self.cost_mask = cost_mask
self.cost_dice = cost_dice
@torch.no_grad()
def forward(
self,
masks_queries_logits: torch.Tensor,
class_queries_logits: torch.Tensor,
mask_labels: torch.Tensor,
class_labels: torch.Tensor,
) -> List[Tuple[Tensor]]:
"""
Params:
masks_queries_logits (`torch.Tensor`):
A tensor of dim `batch_size, num_queries, num_labels` with the classification logits.
class_queries_logits (`torch.Tensor`):
A tensor of dim `batch_size, num_queries, height, width` with the predicted masks.
class_labels (`torch.Tensor`):
A tensor of dim `num_target_boxes` (where num_target_boxes is the number of ground-truth objects in the
target) containing the class labels.
mask_labels (`torch.Tensor`):
A tensor of dim `num_target_boxes, height, width` containing the target masks.
Returns:
matched_indices (`List[Tuple[Tensor]]`): A list of size batch_size, containing tuples of (index_i, index_j)
where:
- index_i is the indices of the selected predictions (in order)
- index_j is the indices of the corresponding selected labels (in order)
For each batch element, it holds:
len(index_i) = len(index_j) = min(num_queries, num_target_boxes).
"""
indices: List[Tuple[np.array]] = []
# iterate through batch size
batch_size = masks_queries_logits.shape[0]
for i in range(batch_size):
pred_probs = class_queries_logits[i].softmax(-1)
pred_mask = masks_queries_logits[i]
# Compute the classification cost. Contrary to the loss, we don't use the NLL, but approximate it in 1 - proba[target class]. The 1 is a constant that doesn't change the matching, it can be ommitted.
cost_class = -pred_probs[:, class_labels[i]]
target_mask = mask_labels[i].to(pred_mask)
target_mask = target_mask[:, None]
pred_mask = pred_mask[:, None]
# Sample ground truth and predicted masks
point_coordinates = torch.rand(1, self.num_points, 2, device=pred_mask.device)
target_coordinates = point_coordinates.repeat(target_mask.shape[0], 1, 1)
target_mask = sample_point(target_mask, target_coordinates, align_corners=False).squeeze(1)
pred_coordinates = point_coordinates.repeat(pred_mask.shape[0], 1, 1)
pred_mask = sample_point(pred_mask, pred_coordinates, align_corners=False).squeeze(1)
# compute the cross entropy loss between each mask pairs -> shape (num_queries, num_labels)
cost_mask = pair_wise_sigmoid_cross_entropy_loss(pred_mask, target_mask)
# Compute the dice loss betwen each mask pairs -> shape (num_queries, num_labels)
cost_dice = pair_wise_dice_loss(pred_mask, target_mask)
# final cost matrix
cost_matrix = self.cost_mask * cost_mask + self.cost_class * cost_class + self.cost_dice * cost_dice
# do the assigmented using the hungarian algorithm in scipy
assigned_indices: Tuple[np.array] = linear_sum_assignment(cost_matrix.cpu())
indices.append(assigned_indices)
# It could be stacked in one tensor
matched_indices = [
(torch.as_tensor(i, dtype=torch.int64), torch.as_tensor(j, dtype=torch.int64)) for i, j in indices
]
return matched_indices
# Adapted from https://github.com/facebookresearch/Mask2Former/blob/main/mask2former/modeling/criterion.py
class Mask2FormerLoss(nn.Module):
def __init__(self, config: Mask2FormerConfig, weight_dict: Dict[str, float]):
"""
The Mask2Former Loss. The loss is computed very similar to DETR. The process happens in two steps: 1) we
compute hungarian assignment between ground truth masks and the outputs of the model 2) we supervise each pair
of matched ground-truth / prediction (supervise class and mask)
Args:
config (`Mask2FormerConfig`):
The configuration for Mask2Former model also containing loss calculation specific parameters.
weight_dict (`Dict[str, float]`):
A dictionary of weights to be applied to the different losses.
"""
super().__init__()
requires_backends(self, ["scipy"])
self.num_labels = config.num_labels
self.weight_dict = weight_dict
# Weight to apply to the null class
self.eos_coef = config.no_object_weight
empty_weight = torch.ones(self.num_labels + 1)
empty_weight[-1] = self.eos_coef
self.register_buffer("empty_weight", empty_weight)
# pointwise mask loss parameters
self.num_points = config.train_num_points
self.oversample_ratio = config.oversample_ratio
self.importance_sample_ratio = config.importance_sample_ratio
self.matcher = Mask2FormerHungarianMatcher(
cost_class=1.0,
cost_dice=config.dice_weight,
cost_mask=config.mask_weight,
num_points=self.num_points,
)
def _max_by_axis(self, sizes: List[List[int]]) -> List[int]:
maxes = sizes[0]
for sublist in sizes[1:]:
for index, item in enumerate(sublist):
maxes[index] = max(maxes[index], item)
return maxes
# Adapted from nested_tensor_from_tensor_list() in original implementation
def _pad_images_to_max_in_batch(self, tensors: List[Tensor]) -> Tuple[Tensor, Tensor]:
# get the maximum size in the batch
max_size = self._max_by_axis([list(tensor.shape) for tensor in tensors])
# compute final size
batch_shape = [len(tensors)] + max_size
batch_size, _, height, width = batch_shape
dtype = tensors[0].dtype
device = tensors[0].device
padded_tensors = torch.zeros(batch_shape, dtype=dtype, device=device)
padding_masks = torch.ones((batch_size, height, width), dtype=torch.bool, device=device)
# pad the tensors to the size of the biggest one
for tensor, padded_tensor, padding_mask in zip(tensors, padded_tensors, padding_masks):
padded_tensor[: tensor.shape[0], : tensor.shape[1], : tensor.shape[2]].copy_(tensor)
padding_mask[: tensor.shape[1], : tensor.shape[2]] = False
return padded_tensors, padding_masks
def loss_labels(
self, class_queries_logits: Tensor, class_labels: List[Tensor], indices: Tuple[np.array]
) -> Dict[str, Tensor]:
"""Compute the losses related to the labels using cross entropy.
Args:
class_queries_logits (`torch.Tensor`):
A tensor of shape `batch_size, num_queries, num_labels`
class_labels (`List[torch.Tensor]`):
List of class labels of shape `(labels)`.
indices (`Tuple[np.array])`:
The indices computed by the Hungarian matcher.
Returns:
`Dict[str, Tensor]`: A dict of `torch.Tensor` containing the following key:
- **loss_cross_entropy** -- The loss computed using cross entropy on the predicted and ground truth labels.
"""
pred_logits = class_queries_logits
batch_size, num_queries, _ = pred_logits.shape
criterion = nn.CrossEntropyLoss(weight=self.empty_weight)
idx = self._get_predictions_permutation_indices(indices) # shape of (batch_size, num_queries)
target_classes_o = torch.cat(
[target[j] for target, (_, j) in zip(class_labels, indices)]
) # shape of (batch_size, num_queries)
target_classes = torch.full(
(batch_size, num_queries), fill_value=self.num_labels, dtype=torch.int64, device=pred_logits.device
)
target_classes[idx] = target_classes_o
# Permute target_classes (batch_size, num_queries, num_labels) -> (batch_size, num_labels, num_queries)
pred_logits_transposed = pred_logits.transpose(1, 2)
loss_ce = criterion(pred_logits_transposed, target_classes)
losses = {"loss_cross_entropy": loss_ce}
return losses
def loss_masks(
self,
masks_queries_logits: torch.Tensor,
mask_labels: List[torch.Tensor],
indices: Tuple[np.array],
num_masks: int,
) -> Dict[str, torch.Tensor]:
"""Compute the losses related to the masks using sigmoid_cross_entropy_loss and dice loss.
Args:
masks_queries_logits (`torch.Tensor`):
A tensor of shape `(batch_size, num_queries, height, width)`.
mask_labels (`torch.Tensor`):
List of mask labels of shape `(labels, height, width)`.
indices (`Tuple[np.array])`:
The indices computed by the Hungarian matcher.
num_masks (`int)`:
The number of masks, used for normalization.
Returns:
losses (`Dict[str, Tensor]`): A dict of `torch.Tensor` containing two keys:
- **loss_mask** -- The loss computed using sigmoid cross entropy loss on the predicted and ground truth.
masks.
- **loss_dice** -- The loss computed using dice loss on the predicted on the predicted and ground truth,
masks.
"""
src_idx = self._get_predictions_permutation_indices(indices)
tgt_idx = self._get_targets_permutation_indices(indices)
# shape (batch_size * num_queries, height, width)
pred_masks = masks_queries_logits[src_idx]
# shape (batch_size, num_queries, height, width)
# pad all and stack the targets to the num_labels dimension
target_masks, _ = self._pad_images_to_max_in_batch(mask_labels)
target_masks = target_masks[tgt_idx]
# No need to upsample predictions as we are using normalized coordinates
pred_masks = pred_masks[:, None]
target_masks = target_masks[:, None]
# Sample point coordinates
with torch.no_grad():
point_coordinates = self.sample_points_using_uncertainty(
pred_masks,
lambda logits: self.calculate_uncertainty(logits),
self.num_points,
self.oversample_ratio,
self.importance_sample_ratio,
)
point_labels = sample_point(target_masks, point_coordinates, align_corners=False).squeeze(1)
point_logits = sample_point(pred_masks, point_coordinates, align_corners=False).squeeze(1)
losses = {
"loss_mask": sigmoid_cross_entropy_loss(point_logits, point_labels, num_masks),
"loss_dice": dice_loss(point_logits, point_labels, num_masks),
}
del pred_masks
del target_masks
return losses
def _get_predictions_permutation_indices(self, indices):
# Permute predictions following indices
batch_indices = torch.cat([torch.full_like(src, i) for i, (src, _) in enumerate(indices)])
predictions_indices = torch.cat([src for (src, _) in indices])
return batch_indices, predictions_indices
def _get_targets_permutation_indices(self, indices):
# Permute labels following indices
batch_indices = torch.cat([torch.full_like(tgt, i) for i, (_, tgt) in enumerate(indices)])
target_indices = torch.cat([tgt for (_, tgt) in indices])
return batch_indices, target_indices
def calculate_uncertainty(self, logits: torch.Tensor) -> torch.Tensor:
"""
In Mask2Former paper, uncertainty is estimated as L1 distance between 0.0 and the logit prediction in 'logits'
for the foreground class in `classes`.
Args:
logits (`torch.Tensor`):
A tensor of shape (R, 1, ...) for class-specific or class-agnostic, where R is the total number of predicted masks in all images and C is:
the number of foreground classes. The values are logits.
Returns:
scores (`torch.Tensor`): A tensor of shape (R, 1, ...) that contains uncertainty scores with the most
uncertain locations having the highest uncertainty score.
"""
uncertainty_scores = -(torch.abs(logits))
return uncertainty_scores
def sample_points_using_uncertainty(
self,
logits: torch.Tensor,
uncertainty_function,
num_points: int,
oversample_ratio: int,
importance_sample_ratio: float,
) -> torch.Tensor:
"""
This function is meant for sampling points in [0, 1] * [0, 1] coordinate space based on their uncertainty. The
uncertainty is calculated for each point using the passed `uncertainty function` that takes points logit
prediction as input.
Args:
logits (`float`):
Logit predictions for P points.
uncertainty_function:
A function that takes logit predictions for P points and returns their uncertainties.
num_points (`int`):
The number of points P to sample.
oversample_ratio (`int`):
Oversampling parameter.
importance_sample_ratio (`float`):
Ratio of points that are sampled via importance sampling.
Returns:
point_coordinates (`torch.Tensor`):
Coordinates for P sampled points.
"""
num_boxes = logits.shape[0]
num_points_sampled = int(num_points * oversample_ratio)
# Get random point coordinates
point_coordinates = torch.rand(num_boxes, num_points_sampled, 2, device=logits.device)
# Get sampled prediction value for the point coordinates
point_logits = sample_point(logits, point_coordinates, align_corners=False)
# Calculate the uncertainties based on the sampled prediction values of the points
point_uncertainties = uncertainty_function(point_logits)
num_uncertain_points = int(importance_sample_ratio * num_points)
num_random_points = num_points - num_uncertain_points
idx = torch.topk(point_uncertainties[:, 0, :], k=num_uncertain_points, dim=1)[1]
shift = num_points_sampled * torch.arange(num_boxes, dtype=torch.long, device=logits.device)
idx += shift[:, None]
point_coordinates = point_coordinates.view(-1, 2)[idx.view(-1), :].view(num_boxes, num_uncertain_points, 2)
if num_random_points > 0:
point_coordinates = torch.cat(
[point_coordinates, torch.rand(num_boxes, num_random_points, 2, device=logits.device)],
dim=1,
)
return point_coordinates
def forward(
self,
masks_queries_logits: torch.Tensor,
class_queries_logits: torch.Tensor,
mask_labels: List[torch.Tensor],
class_labels: List[torch.Tensor],
auxiliary_predictions: Optional[Dict[str, torch.Tensor]] = None,
) -> Dict[str, torch.Tensor]:
"""
This performs the loss computation.
Args:
masks_queries_logits (`torch.Tensor`):
A tensor of shape `(batch_size, num_queries, height, width)`.
class_queries_logits (`torch.Tensor`):
A tensor of shape `(batch_size, num_queries, num_labels)`.
mask_labels (`torch.Tensor`):
List of mask labels of shape `(labels, height, width)`.
class_labels (`List[torch.Tensor]`):
List of class labels of shape `(labels)`.
auxiliary_predictions (`Dict[str, torch.Tensor]`, *optional*):
if `use_auxiliary_loss` was set to `true` in [`Mask2FormerConfig`], then it contains the logits from
the inner layers of the Mask2FormerMaskedAttentionDecoder.
Returns:
losses (`Dict[str, Tensor]`): A dict of `torch.Tensor` containing three keys:
- **loss_cross_entropy** -- The loss computed using cross entropy on the predicted and ground truth labels.
- **loss_mask** -- The loss computed using sigmoid cross_entropy loss on the predicted and ground truth
masks.
- **loss_dice** -- The loss computed using dice loss on the predicted on the predicted and ground truth
masks.
if `use_auxiliary_loss` was set to `true` in [`Mask2FormerConfig`], the dictionary contains additional
losses for each auxiliary predictions.
"""
# retrieve the matching between the outputs of the last layer and the labels
indices = self.matcher(masks_queries_logits, class_queries_logits, mask_labels, class_labels)
# compute the average number of target masks for normalization purposes
num_masks = self.get_num_masks(class_labels, device=class_labels[0].device)
# get all the losses
losses: Dict[str, Tensor] = {
**self.loss_masks(masks_queries_logits, mask_labels, indices, num_masks),
**self.loss_labels(class_queries_logits, class_labels, indices),
}
# in case of auxiliary losses, we repeat this process with the output of each intermediate layer.
if auxiliary_predictions is not None:
for idx, aux_outputs in enumerate(auxiliary_predictions):
masks_queries_logits = aux_outputs["masks_queries_logits"]
class_queries_logits = aux_outputs["class_queries_logits"]
loss_dict = self.forward(masks_queries_logits, class_queries_logits, mask_labels, class_labels)
loss_dict = {f"{key}_{idx}": value for key, value in loss_dict.items()}
losses.update(loss_dict)
return losses
def get_num_masks(self, class_labels: torch.Tensor, device: torch.device) -> torch.Tensor:
"""
Computes the average number of target masks across the batch, for normalization purposes.
"""
num_masks = sum([len(classes) for classes in class_labels])
num_masks_pt = torch.as_tensor([num_masks], dtype=torch.float, device=device)
return num_masks_pt
# Copied from transformers.models.deformable_detr.modeling_deformable_detr.multi_scale_deformable_attention
def multi_scale_deformable_attention(
value: Tensor, value_spatial_shapes: Tensor, sampling_locations: Tensor, attention_weights: Tensor
) -> Tensor:
batch_size, _, num_heads, hidden_dim = value.shape
_, num_queries, num_heads, num_levels, num_points, _ = sampling_locations.shape
value_list = value.split([height.item() * width.item() for height, width in value_spatial_shapes], dim=1)
sampling_grids = 2 * sampling_locations - 1
sampling_value_list = []
for level_id, (height, width) in enumerate(value_spatial_shapes):
# batch_size, height*width, num_heads, hidden_dim
# -> batch_size, height*width, num_heads*hidden_dim
# -> batch_size, num_heads*hidden_dim, height*width
# -> batch_size*num_heads, hidden_dim, height, width
value_l_ = (
value_list[level_id].flatten(2).transpose(1, 2).reshape(batch_size * num_heads, hidden_dim, height, width)
)
# batch_size, num_queries, num_heads, num_points, 2
# -> batch_size, num_heads, num_queries, num_points, 2
# -> batch_size*num_heads, num_queries, num_points, 2
sampling_grid_l_ = sampling_grids[:, :, :, level_id].transpose(1, 2).flatten(0, 1)
# batch_size*num_heads, hidden_dim, num_queries, num_points
sampling_value_l_ = nn.functional.grid_sample(
value_l_, sampling_grid_l_, mode="bilinear", padding_mode="zeros", align_corners=False
)
sampling_value_list.append(sampling_value_l_)
# (batch_size, num_queries, num_heads, num_levels, num_points)
# -> (batch_size, num_heads, num_queries, num_levels, num_points)
# -> (batch_size, num_heads, 1, num_queries, num_levels*num_points)
attention_weights = attention_weights.transpose(1, 2).reshape(
batch_size * num_heads, 1, num_queries, num_levels * num_points
)
output = (
(torch.stack(sampling_value_list, dim=-2).flatten(-2) * attention_weights)
.sum(-1)
.view(batch_size, num_heads * hidden_dim, num_queries)
)
return output.transpose(1, 2).contiguous()
# Copied from transformers.models.maskformer.modeling_maskformer.MaskFormerSinePositionEmbedding with MaskFormer->Mask2Former
class Mask2FormerSinePositionEmbedding(nn.Module):
"""
This is a more standard version of the position embedding, very similar to the one used by the Attention is all you
need paper, generalized to work on images.
"""
def __init__(
self, num_pos_feats: int = 64, temperature: int = 10000, normalize: bool = False, scale: Optional[float] = None
):
super().__init__()
if scale is not None and normalize is False:
raise ValueError("normalize should be True if scale is passed")
self.num_pos_feats = num_pos_feats
self.temperature = temperature
self.normalize = normalize
self.scale = 2 * math.pi if scale is None else scale
def forward(self, x: Tensor, mask: Optional[Tensor] = None) -> Tensor:
if mask is None:
mask = torch.zeros((x.size(0), x.size(2), x.size(3)), device=x.device, dtype=torch.bool)
not_mask = ~mask
y_embed = not_mask.cumsum(1, dtype=torch.float32)
x_embed = not_mask.cumsum(2, dtype=torch.float32)
if self.normalize:
eps = 1e-6
y_embed = y_embed / (y_embed[:, -1:, :] + eps) * self.scale
x_embed = x_embed / (x_embed[:, :, -1:] + eps) * self.scale
dim_t = torch.arange(self.num_pos_feats, dtype=torch.float32, device=x.device)
dim_t = self.temperature ** (2 * torch.div(dim_t, 2, rounding_mode="floor") / self.num_pos_feats)
pos_x = x_embed[:, :, :, None] / dim_t
pos_y = y_embed[:, :, :, None] / dim_t
pos_x = torch.stack((pos_x[:, :, :, 0::2].sin(), pos_x[:, :, :, 1::2].cos()), dim=4).flatten(3)
pos_y = torch.stack((pos_y[:, :, :, 0::2].sin(), pos_y[:, :, :, 1::2].cos()), dim=4).flatten(3)
pos = torch.cat((pos_y, pos_x), dim=3).permute(0, 3, 1, 2)
return pos
# Modified from transformers.models.detr.modeling_deformable_detr.DeformableDetrMultiscaleDeformableAttention
class Mask2FormerPixelDecoderEncoderMultiscaleDeformableAttention(nn.Module):
"""
Multiscale deformable attention as proposed in Deformable DETR.
"""
def __init__(self, embed_dim: int, num_heads: int, n_levels: int, n_points: int):
super().__init__()
if embed_dim % num_heads != 0:
raise ValueError(
f"embed_dim (d_model) must be divisible by num_heads, but got {embed_dim} and {num_heads}"
)
dim_per_head = embed_dim // num_heads
# check if dim_per_head is power of 2
if not ((dim_per_head & (dim_per_head - 1) == 0) and dim_per_head != 0):
warnings.warn(
"You'd better set embed_dim (d_model) in DeformableDetrMultiscaleDeformableAttention to make the"
" dimension of each attention head a power of 2 which is more efficient in the authors' CUDA"
" implementation."
)
self.im2col_step = 128
self.d_model = embed_dim
self.n_levels = n_levels
self.n_heads = num_heads
self.n_points = n_points
self.sampling_offsets = nn.Linear(embed_dim, num_heads * n_levels * n_points * 2)
self.attention_weights = nn.Linear(embed_dim, num_heads * n_levels * n_points)
self.value_proj = nn.Linear(embed_dim, embed_dim)
self.output_proj = nn.Linear(embed_dim, embed_dim)
def with_pos_embed(self, tensor: torch.Tensor, position_embeddings: Optional[Tensor]):
return tensor if position_embeddings is None else tensor + position_embeddings
def forward(
self,
hidden_states: torch.Tensor,
attention_mask: Optional[torch.Tensor] = None,
encoder_hidden_states=None,
encoder_attention_mask=None,
position_embeddings: Optional[torch.Tensor] = None,
reference_points=None,
spatial_shapes=None,
level_start_index=None,
output_attentions: bool = False,
):
# add position embeddings to the hidden states before projecting to queries and keys
if position_embeddings is not None:
hidden_states = self.with_pos_embed(hidden_states, position_embeddings)
batch_size, num_queries, _ = hidden_states.shape
batch_size, sequence_length, _ = encoder_hidden_states.shape
if (spatial_shapes[:, 0] * spatial_shapes[:, 1]).sum() != sequence_length:
raise ValueError(
"Make sure to align the spatial shapes with the sequence length of the encoder hidden states"
)
value = self.value_proj(encoder_hidden_states)
if attention_mask is not None:
# we invert the attention_mask
value = value.masked_fill(attention_mask[..., None], float(0))
value = value.view(batch_size, sequence_length, self.n_heads, self.d_model // self.n_heads)
sampling_offsets = self.sampling_offsets(hidden_states).view(
batch_size, num_queries, self.n_heads, self.n_levels, self.n_points, 2
)
attention_weights = self.attention_weights(hidden_states).view(
batch_size, num_queries, self.n_heads, self.n_levels * self.n_points
)
attention_weights = nn.functional.softmax(attention_weights, -1).view(
batch_size, num_queries, self.n_heads, self.n_levels, self.n_points
)
# batch_size, num_queries, n_heads, n_levels, n_points, 2
if reference_points.shape[-1] == 2:
offset_normalizer = torch.stack([spatial_shapes[..., 1], spatial_shapes[..., 0]], -1)
sampling_locations = (
reference_points[:, :, None, :, None, :]
+ sampling_offsets / offset_normalizer[None, None, None, :, None, :]
)
elif reference_points.shape[-1] == 4:
sampling_locations = (
reference_points[:, :, None, :, None, :2]
+ sampling_offsets / self.n_points * reference_points[:, :, None, :, None, 2:] * 0.5
)
else:
raise ValueError(f"Last dim of reference_points must be 2 or 4, but got {reference_points.shape[-1]}")
output = multi_scale_deformable_attention(value, spatial_shapes, sampling_locations, attention_weights)
output = self.output_proj(output)
return output, attention_weights
class Mask2FormerPixelDecoderEncoderLayer(nn.Module):
def __init__(self, config: Mask2FormerConfig):
super().__init__()
self.embed_dim = config.feature_size
self.self_attn = Mask2FormerPixelDecoderEncoderMultiscaleDeformableAttention(
embed_dim=self.embed_dim,
num_heads=config.num_attention_heads,
n_levels=3,
n_points=4,
)
self.self_attn_layer_norm = nn.LayerNorm(self.embed_dim)
self.dropout = config.dropout
self.activation_fn = nn.functional.relu
self.activation_dropout = config.dropout
self.fc1 = nn.Linear(self.embed_dim, config.encoder_feedforward_dim)
self.fc2 = nn.Linear(config.encoder_feedforward_dim, self.embed_dim)
self.final_layer_norm = nn.LayerNorm(self.embed_dim)
def forward(
self,
hidden_states: torch.Tensor,
attention_mask: torch.Tensor,
position_embeddings: torch.Tensor = None,
reference_points=None,
spatial_shapes=None,
level_start_index=None,
output_attentions: bool = False,
):
"""
Args:
hidden_states (`torch.FloatTensor` of shape `(batch_size, sequence_length, hidden_size)`):
Input to the layer.
attention_mask (`torch.FloatTensor` of shape `(batch_size, sequence_length)`):
Attention mask.
position_embeddings (`torch.FloatTensor`, *optional*):
Position embeddings, to be added to `hidden_states`.
reference_points (`torch.FloatTensor`, *optional*):
Reference points.
spatial_shapes (`torch.LongTensor`, *optional*):
Spatial shapes of the backbone feature maps.
level_start_index (`torch.LongTensor`, *optional*):
Level start index.
output_attentions (`bool`, *optional*):
Whether or not to return the attentions tensors of all attention layers. See `attentions` under
returned tensors for more detail.
"""
residual = hidden_states
# Apply Multi-scale Deformable Attention Module on the multi-scale feature maps.
hidden_states, attn_weights = self.self_attn(
hidden_states=hidden_states,
attention_mask=attention_mask,
encoder_hidden_states=hidden_states,
encoder_attention_mask=attention_mask,
position_embeddings=position_embeddings,
reference_points=reference_points,
spatial_shapes=spatial_shapes,
level_start_index=level_start_index,
output_attentions=output_attentions,
)
hidden_states = nn.functional.dropout(hidden_states, p=self.dropout, training=self.training)
hidden_states = residual + hidden_states
hidden_states = self.self_attn_layer_norm(hidden_states)
residual = hidden_states
hidden_states = self.activation_fn(self.fc1(hidden_states))
hidden_states = nn.functional.dropout(hidden_states, p=self.activation_dropout, training=self.training)
hidden_states = self.fc2(hidden_states)
hidden_states = nn.functional.dropout(hidden_states, p=self.dropout, training=self.training)
hidden_states = residual + hidden_states
hidden_states = self.final_layer_norm(hidden_states)
if self.training:
if torch.isinf(hidden_states).any() or torch.isnan(hidden_states).any():
clamp_value = torch.finfo(hidden_states.dtype).max - 1000
hidden_states = torch.clamp(hidden_states, min=-clamp_value, max=clamp_value)
outputs = (hidden_states,)
if output_attentions:
outputs += (attn_weights.transpose(1, 0),)
return outputs
# Modified from from transformers.models.detr.modeling_deformable_detr.DeformableDetrEncoder with DeformableDetrEncoder->Mask2FormerPixelDecoderEncoderOnly
class Mask2FormerPixelDecoderEncoderOnly(nn.Module):
"""
Transformer encoder consisting of *config.encoder_layers* deformable attention layers. Each layer is a
[`Mask2FormerPixelDecoderEncoderLayer`]. The encoder updates the flattened multi-scale feature maps through
multiple deformable attention layers.
Args:
config: Mask2FormerConfig
"""
def __init__(self, config: Mask2FormerConfig):
super().__init__()
self.config = config
self.dropout = config.dropout
self.layers = nn.ModuleList(
[Mask2FormerPixelDecoderEncoderLayer(config) for _ in range(config.encoder_layers)]
)
@staticmethod
def get_reference_points(spatial_shapes, valid_ratios, device):
"""
Get reference points for each feature map. Used in decoder.
Args:
spatial_shapes (`torch.LongTensor`):
Spatial shapes of each feature map, has shape of `(num_feature_levels, 2)`.
valid_ratios (`torch.FloatTensor`):
Valid ratios of each feature map, has shape of `(batch_size, num_feature_levels, 2)`.
device (`torch.device`):
Device on which to create the tensors.
Returns:
`torch.FloatTensor` of shape `(batch_size, num_queries, num_feature_levels, 2)`
"""
reference_points_list = []
for lvl, (height, width) in enumerate(spatial_shapes):
ref_y, ref_x = torch.meshgrid(
torch.linspace(0.5, height - 0.5, height, dtype=torch.float32, device=device),
torch.linspace(0.5, width - 0.5, width, dtype=torch.float32, device=device),
indexing="ij",
)
ref_y = ref_y.reshape(-1)[None] / (valid_ratios[:, None, lvl, 1] * height)
ref_x = ref_x.reshape(-1)[None] / (valid_ratios[:, None, lvl, 0] * width)
ref = torch.stack((ref_x, ref_y), -1)
reference_points_list.append(ref)
reference_points = torch.cat(reference_points_list, 1)
reference_points = reference_points[:, :, None] * valid_ratios[:, None]
return reference_points
def forward(
self,
inputs_embeds=None,
attention_mask=None,
position_embeddings=None,
spatial_shapes=None,
level_start_index=None,
valid_ratios=None,
output_attentions=None,
output_hidden_states=None,
return_dict=None,
):
r"""
Args:
inputs_embeds (`torch.FloatTensor` of shape `(batch_size, sequence_length, hidden_size)`):
Flattened feature map (output of the backbone + projection layer) that is passed to the encoder.
attention_mask (`torch.Tensor` of shape `(batch_size, sequence_length)`, *optional*):
Mask to avoid performing attention on padding pixel features. Mask values selected in `[0, 1]`:
- 1 for pixel features that are real (i.e. **not masked**),
- 0 for pixel features that are padding (i.e. **masked**).
[What are attention masks?](../glossary#attention-mask)
position_embeddings (`torch.FloatTensor` of shape `(batch_size, sequence_length, hidden_size)`):
Position embeddings that are added to the queries and keys in each self-attention layer.
spatial_shapes (`torch.LongTensor` of shape `(num_feature_levels, 2)`):
Spatial shapes of each feature map.
level_start_index (`torch.LongTensor` of shape `(num_feature_levels)`):
Starting index of each feature map.
valid_ratios (`torch.FloatTensor` of shape `(batch_size, num_feature_levels, 2)`):
Ratio of valid area in each feature level.
output_attentions (`bool`, *optional*):
Whether or not to return the attentions tensors of all attention layers. See `attentions` under
returned tensors for more detail.
output_hidden_states (`bool`, *optional*):
Whether or not to return the hidden states of all layers. See `hidden_states` under returned tensors
for more detail.
return_dict (`bool`, *optional*):
Whether or not to return a [`~file_utils.ModelOutput`] instead of a plain tuple.
"""
output_attentions = output_attentions if output_attentions is not None else self.config.output_attentions
output_hidden_states = (
output_hidden_states if output_hidden_states is not None else self.config.output_hidden_states
)
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
hidden_states = inputs_embeds
reference_points = self.get_reference_points(spatial_shapes, valid_ratios, device=inputs_embeds.device)
all_hidden_states = () if output_hidden_states else None
all_attentions = () if output_attentions else None
for i, encoder_layer in enumerate(self.layers):
if output_hidden_states:
all_hidden_states += (hidden_states.transpose(1, 0),)
layer_outputs = encoder_layer(
hidden_states,
attention_mask,
position_embeddings=position_embeddings,
reference_points=reference_points,
spatial_shapes=spatial_shapes,
level_start_index=level_start_index,
output_attentions=output_attentions,
)
hidden_states = layer_outputs[0]
if output_attentions:
all_attentions = all_attentions + (layer_outputs[1],)
if output_hidden_states:
all_hidden_states += (hidden_states.transpose(1, 0),)
return BaseModelOutput(
last_hidden_state=hidden_states, hidden_states=all_hidden_states, attentions=all_attentions
)
# Modified from from transformers.models.detr.modeling_deformable_detr.DeformableDetrModel with DeformableDetrModel->Mask2FormerPixelDecoder
class Mask2FormerPixelDecoder(nn.Module):
def __init__(self, config: Mask2FormerConfig, feature_channels):
super().__init__()
self.config = config
feature_dim = config.feature_size
mask_dim = config.mask_feature_size
num_pos_features = feature_dim // 2
self.position_embedding = Mask2FormerSinePositionEmbedding(num_pos_feats=num_pos_features, normalize=True)
self.num_feature_levels = 3
transformer_in_channels = feature_channels[-self.num_feature_levels :]
self.transformer_feature_strides = config.feature_strides[-self.num_feature_levels :]
self.feature_channels = feature_channels
self.level_embed = nn.Parameter(torch.Tensor(self.num_feature_levels, feature_dim))
# Create input projection layers
if self.num_feature_levels > 1:
input_projections_list = []
for in_channels in transformer_in_channels[::-1]:
input_projections_list.append(
nn.Sequential(
nn.Conv2d(in_channels, feature_dim, kernel_size=1),
nn.GroupNorm(32, feature_dim),
)
)
self.input_projections = nn.ModuleList(input_projections_list)
else:
self.input_projections = nn.ModuleList(
[
nn.Sequential(
nn.Conv2d(transformer_in_channels[-1], feature_dim, kernel_size=1),
nn.GroupNorm(32, feature_dim),
)
]
)
self.encoder = Mask2FormerPixelDecoderEncoderOnly(config)
self.mask_projection = nn.Conv2d(feature_dim, mask_dim, kernel_size=1, stride=1, padding=0)
# Extra FPN levels
stride = min(self.transformer_feature_strides)
self.common_stride = config.common_stride
self.num_fpn_levels = int(np.log2(stride) - np.log2(self.common_stride))
lateral_convs = []
output_convs = []
for idx, in_channels in enumerate(self.feature_channels[: self.num_fpn_levels]):
lateral_conv = nn.Sequential(
nn.Conv2d(in_channels, feature_dim, kernel_size=1, bias=False),
nn.GroupNorm(32, feature_dim),
)
output_conv = nn.Sequential(
nn.Conv2d(feature_dim, feature_dim, kernel_size=3, stride=1, padding=1, bias=False),
nn.GroupNorm(32, feature_dim),
nn.ReLU(),
)
self.add_module("adapter_{}".format(idx + 1), lateral_conv)
self.add_module("layer_{}".format(idx + 1), output_conv)
lateral_convs.append(lateral_conv)
output_convs.append(output_conv)
# Order convolutional layers from low to high resolution
self.lateral_convolutions = lateral_convs[::-1]
self.output_convolutions = output_convs[::-1]
def get_valid_ratio(self, mask):
"""Get the valid ratio of all feature maps."""
_, height, width = mask.shape
valid_height = torch.sum(~mask[:, :, 0], 1)
valid_width = torch.sum(~mask[:, 0, :], 1)
valid_ratio_heigth = valid_height.float() / height
valid_ratio_width = valid_width.float() / width
valid_ratio = torch.stack([valid_ratio_width, valid_ratio_heigth], -1)
return valid_ratio
def forward(
self,
features,
encoder_outputs=None,
output_attentions=None,
output_hidden_states=None,
return_dict=None,
):
output_attentions = output_attentions if output_attentions is not None else self.config.output_attentions
output_hidden_states = (
output_hidden_states if output_hidden_states is not None else self.config.output_hidden_states
)
# Apply 1x1 convolution to reduce the channel dimension to d_model (256 by default)
input_embeds = []
position_embeddings = []
for level, x in enumerate(features[::-1][: self.num_feature_levels]):
input_embeds.append(self.input_projections[level](x.float()))
position_embeddings.append(self.position_embedding(x.float()))
masks = [
torch.zeros((x.size(0), x.size(2), x.size(3)), device=x.device, dtype=torch.bool) for x in input_embeds
]
# Prepare encoder inputs (by flattening)
spatial_shapes = [(embed.shape[2], embed.shape[3]) for embed in input_embeds]
input_embeds_flat = torch.cat([embed.flatten(2).transpose(1, 2) for embed in input_embeds], 1)
spatial_shapes = torch.as_tensor(spatial_shapes, dtype=torch.long, device=input_embeds_flat.device)
masks_flat = torch.cat([mask.flatten(1) for mask in masks], 1)
position_embeddings = [embed.flatten(2).transpose(1, 2) for embed in position_embeddings]
level_pos_embed_flat = [x + self.level_embed[i].view(1, 1, -1) for i, x in enumerate(position_embeddings)]
level_pos_embed_flat = torch.cat(level_pos_embed_flat, 1)
level_start_index = torch.cat((spatial_shapes.new_zeros((1,)), spatial_shapes.prod(1).cumsum(0)[:-1]))
valid_ratios = torch.stack([self.get_valid_ratio(mask) for mask in masks], 1)
# Send input_embeds_flat + masks_flat + level_pos_embed_flat (backbone + proj layer output) through encoder
if encoder_outputs is None:
encoder_outputs = self.encoder(
inputs_embeds=input_embeds_flat,
attention_mask=masks_flat,
position_embeddings=level_pos_embed_flat,
spatial_shapes=spatial_shapes,
level_start_index=level_start_index,
valid_ratios=valid_ratios,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
last_hidden_state = encoder_outputs.last_hidden_state
batch_size = last_hidden_state.shape[0]
split_sizes = [None] * self.num_feature_levels
for i in range(self.num_feature_levels):
if i < self.num_feature_levels - 1:
split_sizes[i] = level_start_index[i + 1] - level_start_index[i]
else:
split_sizes[i] = last_hidden_state.shape[1] - level_start_index[i]
encoder_output = torch.split(last_hidden_state, [size.item() for size in split_sizes], dim=1)
# Compute final features
outputs = [
x.transpose(1, 2).view(batch_size, -1, spatial_shapes[i][0], spatial_shapes[i][1])
for i, x in enumerate(encoder_output)
]
# Append extra FPN levels to outputs, ordered from low to high resolution
for idx, feature in enumerate(features[: self.num_fpn_levels][::-1]):
lateral_conv = self.lateral_convolutions[idx]
output_conv = self.output_convolutions[idx]
current_fpn = lateral_conv(feature.float())
# Following FPN implementation, we use nearest upsampling here
out = current_fpn + nn.functional.interpolate(
outputs[-1], size=current_fpn.shape[-2:], mode="bilinear", align_corners=False
)
out = output_conv(out)
outputs.append(out)
num_cur_levels = 0
multi_scale_features = []
for out in outputs:
if num_cur_levels < self.num_feature_levels:
multi_scale_features.append(out)
num_cur_levels += 1
return Mask2FormerPixelDecoderOutput(
mask_features=self.mask_projection(outputs[-1]),
multi_scale_features=tuple(multi_scale_features),
attentions=encoder_outputs.attentions,
)
class Mask2FormerPixelLevelModule(nn.Module):
def __init__(self, config: Mask2FormerConfig):
"""
Pixel Level Module proposed in [Masked-attention Mask Transformer for Universal Image
Segmentation](https://arxiv.org/abs/2112.01527). It runs the input image through a backbone and a pixel
decoder, generating multi-scale feature maps and pixel embeddings.
Args:
config ([`Mask2FormerConfig`]):
The configuration used to instantiate this model.
"""
super().__init__()
self.encoder = AutoBackbone.from_config(config.backbone_config)
self.decoder = Mask2FormerPixelDecoder(config, feature_channels=self.encoder.channels)
def forward(self, pixel_values: Tensor, output_hidden_states: bool = False) -> Mask2FormerPixelLevelModuleOutput:
backbone_features = self.encoder(pixel_values).feature_maps
decoder_output = self.decoder(backbone_features, output_hidden_states=output_hidden_states)
return Mask2FormerPixelLevelModuleOutput(
encoder_last_hidden_state=backbone_features[-1],
encoder_hidden_states=tuple(backbone_features) if output_hidden_states else None,
decoder_last_hidden_state=decoder_output.mask_features,
decoder_hidden_states=decoder_output.multi_scale_features,
)
# Modified from transformers.models.detr.modeling_detr.DetrAttention with Detr->Mask2Former
class Mask2FormerAttention(nn.Module):
"""
Multi-headed attention from 'Attention Is All You Need' paper. Here, we add position embeddings to the queries and
keys (as explained in the DETR paper).
"""
def __init__(
self,
embed_dim: int,
num_heads: int,
dropout: float = 0.0,
is_decoder: bool = False,
bias: bool = True,
):
super().__init__()
self.embed_dim = embed_dim
self.num_heads = num_heads
self.dropout = dropout
self.head_dim = embed_dim // num_heads
if self.head_dim * num_heads != self.embed_dim:
raise ValueError(
f"embed_dim must be divisible by num_heads (got `embed_dim`: {self.embed_dim} and `num_heads`:"
f" {num_heads})."
)
self.scaling = self.head_dim**-0.5
self.k_proj = nn.Linear(embed_dim, embed_dim, bias=bias)
self.v_proj = nn.Linear(embed_dim, embed_dim, bias=bias)
self.q_proj = nn.Linear(embed_dim, embed_dim, bias=bias)
self.out_proj = nn.Linear(embed_dim, embed_dim, bias=bias)
def _shape(self, tensor: torch.Tensor, seq_len: int, batch_size: int):
return tensor.view(batch_size, seq_len, self.num_heads, self.head_dim).transpose(1, 2).contiguous()
def with_pos_embed(self, tensor: torch.Tensor, position_embeddings: Optional[Tensor]):
return tensor if position_embeddings is None else tensor + position_embeddings
def forward(
self,
hidden_states: torch.Tensor,
attention_mask: Optional[torch.Tensor] = None,
position_embeddings: Optional[torch.Tensor] = None,
key_value_states: Optional[torch.Tensor] = None,
key_value_position_embeddings: Optional[torch.Tensor] = None,
output_attentions: bool = False,
) -> Tuple[torch.Tensor, Optional[torch.Tensor], Optional[Tuple[torch.Tensor]]]:
"""Input shape: Batch x Time x Channel"""
hidden_states = hidden_states.permute(1, 0, 2) if hidden_states is not None else None
position_embeddings = position_embeddings.permute(1, 0, 2) if position_embeddings is not None else None
key_value_states = key_value_states.permute(1, 0, 2) if key_value_states is not None else None
key_value_position_embeddings = (
key_value_position_embeddings.permute(1, 0, 2) if key_value_position_embeddings is not None else None
)
# if key_value_states are provided this layer is used as a cross-attention layer
# for the decoder
is_cross_attention = key_value_states is not None
batch_size, target_len, embed_dim = hidden_states.size()
# add position embeddings to the hidden states before projecting to queries and keys
if position_embeddings is not None:
hidden_states_original = hidden_states
hidden_states = self.with_pos_embed(hidden_states, position_embeddings)
# add key-value position embeddings to the key value states
if key_value_position_embeddings is not None:
key_value_states_original = key_value_states
key_value_states = self.with_pos_embed(key_value_states, key_value_position_embeddings)
# get query proj
query_states = self.q_proj(hidden_states) * self.scaling
# get key, value proj
if is_cross_attention:
# cross_attentions
key_states = self._shape(self.k_proj(key_value_states), -1, batch_size)
value_states = self._shape(self.v_proj(key_value_states_original), -1, batch_size)
else:
# self_attention
key_states = self._shape(self.k_proj(hidden_states), -1, batch_size)
value_states = self._shape(self.v_proj(hidden_states_original), -1, batch_size)
proj_shape = (batch_size * self.num_heads, -1, self.head_dim)
query_states = self._shape(query_states, target_len, batch_size).view(*proj_shape)
key_states = key_states.view(*proj_shape)
value_states = value_states.view(*proj_shape)
source_len = key_states.size(1)
attn_weights = torch.bmm(query_states, key_states.transpose(1, 2))
if attn_weights.size() != (batch_size * self.num_heads, target_len, source_len):
raise ValueError(
f"Attention weights should be of size {(batch_size * self.num_heads, target_len, source_len)}, but is"
f" {attn_weights.size()}"
)
if attention_mask is not None:
if attention_mask.size() != (batch_size * self.num_heads, target_len, source_len):
raise ValueError(
f"Attention mask should be of size {(target_len, batch_size * self.num_heads, source_len)}, but is"
f" {attention_mask.size()}"
)
attn_weights += attention_mask
attn_weights = nn.functional.softmax(attn_weights, dim=-1)
if output_attentions:
# this operation is a bit awkward, but it's required to
# make sure that attn_weights keeps its gradient.
# In order to do so, attn_weights have to reshaped
# twice and have to be reused in the following
attn_weights_reshaped = attn_weights.view(batch_size, self.num_heads, target_len, source_len)
attn_weights = attn_weights_reshaped.view(batch_size * self.num_heads, target_len, source_len)
else:
attn_weights_reshaped = None
attn_probs = nn.functional.dropout(attn_weights, p=self.dropout, training=self.training)
attn_output = torch.bmm(attn_probs, value_states)
if attn_output.size() != (batch_size * self.num_heads, target_len, self.head_dim):
raise ValueError(
f"`attn_output` should be of size {(batch_size, self.num_heads, target_len, self.head_dim)}, but is"
f" {attn_output.size()}"
)
attn_output = attn_output.view(batch_size, self.num_heads, target_len, self.head_dim)
attn_output = attn_output.transpose(1, 2)
attn_output = attn_output.reshape(batch_size, target_len, embed_dim)
attn_output = self.out_proj(attn_output).permute(1, 0, 2)
return attn_output, attn_weights_reshaped
class Mask2FormerMaskedAttentionDecoderLayer(nn.Module):
"""
The Mask2FormerMaskedAttentionDecoderLayer is made up of self-attention, cross (masked) attention as well as FFN
blocks. The cross attention block used as part of `Mask2FormerMaskedAttentionDecoderLayer` is actually a `masked
attention` block that restricts the attention to localized features centered around predicted segments which leads
to faster convergence and improved performance. The order of self and cross (i.e. masked) attention blocks have
also been swapped in Mask2FormerMaskedAttentionDecoder compared to a standard DetrDecoder as an optimization
improvement.
Args:
config (`Mask2FormerConfig`):
The configuration used to initialize the Mask2FormerMaskedAttentionDecoder.
"""
def __init__(self, config: Mask2FormerConfig):
super().__init__()
self.config = config
self.embed_dim = self.config.hidden_dim
self.pre_norm = self.config.pre_norm
self.self_attn = Mask2FormerAttention(
embed_dim=self.embed_dim,
num_heads=config.num_attention_heads,
dropout=config.dropout,
is_decoder=True,
)
self.dropout = self.config.dropout
self.activation_fn = ACT2FN[self.config.activation_function]
self.activation_dropout = self.config.dropout
self.self_attn_layer_norm = nn.LayerNorm(self.embed_dim)
self.cross_attn = nn.MultiheadAttention(self.embed_dim, self.config.num_attention_heads, self.config.dropout)
self.cross_attn_layer_norm = nn.LayerNorm(self.embed_dim)
self.fc1 = nn.Linear(self.embed_dim, self.config.dim_feedforward)
self.fc2 = nn.Linear(self.config.dim_feedforward, self.embed_dim)
self.final_layer_norm = nn.LayerNorm(self.embed_dim)
def with_pos_embed(self, tensor, pos: Optional[Tensor]):
return tensor if pos is None else tensor + pos
def forward_post(
self,
hidden_states: torch.Tensor,
level_index: int = None,
attention_mask: Optional[torch.Tensor] = None,
position_embeddings: Optional[torch.Tensor] = None,
query_position_embeddings: Optional[torch.Tensor] = None,
encoder_hidden_states: Optional[torch.Tensor] = None,
encoder_attention_mask: Optional[torch.Tensor] = None,
output_attentions: Optional[bool] = False,
):
# Masked(Cross)-Attention Block
cross_attn_weights = None
self_attn_weights = None
residual = hidden_states
hidden_states, cross_attn_weights = self.cross_attn(
query=self.with_pos_embed(hidden_states, query_position_embeddings),
key=self.with_pos_embed(encoder_hidden_states[level_index], position_embeddings[level_index]),
value=encoder_hidden_states[level_index],
attn_mask=encoder_attention_mask,
key_padding_mask=None,
)
hidden_states = nn.functional.dropout(hidden_states, p=self.dropout, training=self.training)
hidden_states = residual + hidden_states
hidden_states = self.cross_attn_layer_norm(hidden_states)
# Self Attention Block
residual = hidden_states
hidden_states, self_attn_weights = self.self_attn(
hidden_states=hidden_states,
position_embeddings=query_position_embeddings,
attention_mask=None,
output_attentions=True,
)
hidden_states = nn.functional.dropout(hidden_states, p=self.dropout, training=self.training)
hidden_states = residual + hidden_states
hidden_states = self.self_attn_layer_norm(hidden_states)
# Fully Connected
residual = hidden_states
hidden_states = self.activation_fn(self.fc1(hidden_states))
hidden_states = nn.functional.dropout(hidden_states, p=self.activation_dropout, training=self.training)
hidden_states = self.fc2(hidden_states)
hidden_states = nn.functional.dropout(hidden_states, p=self.dropout, training=self.training)
hidden_states = residual + hidden_states
hidden_states = self.final_layer_norm(hidden_states)
outputs = (hidden_states,)
if output_attentions:
outputs += (self_attn_weights, cross_attn_weights)
return outputs
def forward_pre(
self,
hidden_states: torch.Tensor,
level_index: int = None,
attention_mask: Optional[torch.Tensor] = None,
position_embeddings: Optional[torch.Tensor] = None,
query_position_embeddings: Optional[torch.Tensor] = None,
encoder_hidden_states: Optional[torch.Tensor] = None,
encoder_attention_mask: Optional[torch.Tensor] = None,
output_attentions: Optional[bool] = False,
):
# Masked(Cross)-Attention Block
cross_attn_weights = None
self_attn_weights = None
residual = hidden_states
hidden_states = self.cross_attn_layer_norm(hidden_states)
hidden_states, cross_attn_weights = self.cross_attn(
query=self.with_pos_embed(hidden_states, query_position_embeddings),
key=self.with_pos_embed(encoder_hidden_states[level_index], position_embeddings[level_index]),
value=encoder_hidden_states[level_index],
attn_mask=encoder_attention_mask,
key_padding_mask=None,
)
hidden_states = nn.functional.dropout(hidden_states, p=self.dropout, training=self.training)
hidden_states = residual + hidden_states
# Self Attention Block
residual = hidden_states
hidden_states = self.self_attn_layer_norm(hidden_states)
hidden_states, self_attn_weights = self.self_attn(
hidden_states=hidden_states,
position_embeddings=query_position_embeddings,
attention_mask=None,
output_attentions=True,
)
hidden_states = nn.functional.dropout(hidden_states, p=self.dropout, training=self.training)
hidden_states = residual + hidden_states
# Fully Connected
residual = hidden_states
hidden_states = self.final_layer_norm(hidden_states)
hidden_states = self.activation_fn(self.fc1(hidden_states))
hidden_states = nn.functional.dropout(hidden_states, p=self.activation_dropout, training=self.training)
hidden_states = self.fc2(hidden_states)
hidden_states = nn.functional.dropout(hidden_states, p=self.dropout, training=self.training)
hidden_states = residual + hidden_states
outputs = (hidden_states,)
if output_attentions:
outputs += (self_attn_weights, cross_attn_weights)
return outputs
def forward(
self,
hidden_states: torch.Tensor,
level_index: int = None,
attention_mask: Optional[torch.Tensor] = None,
position_embeddings: Optional[torch.Tensor] = None,
query_position_embeddings: Optional[torch.Tensor] = None,
encoder_hidden_states: Optional[torch.Tensor] = None,
encoder_attention_mask: Optional[torch.Tensor] = None,
output_attentions: Optional[bool] = False,
):
"""
Args:
hidden_states (`torch.FloatTensor`):
Input to the layer of shape `(seq_len, batch, embed_dim)`.
attention_mask (`torch.FloatTensor`):
Attention mask of shape `(1, seq_len, tgt_len, src_len)`.
position_embeddings (`torch.FloatTensor`, *optional*):
Position embeddings that are added to the keys in the masked-attention layer.
query_position_embeddings (`torch.FloatTensor`, *optional*):
Position embeddings that are added to the queries and keys in the self-attention layer.
encoder_hidden_states (`torch.FloatTensor`):
Cross attention input to the layer of shape `(seq_len, batch, embed_dim)`.
encoder_attention_mask (`torch.FloatTensor`):
Encoder attention mask of size`(1, seq_len, tgt_len, src_len)`.
output_attentions (`bool`, *optional*):
Whether or not to return the attentions tensors of all attention layers. See `attentions` under
returned tensors for more detail.
"""
if self.pre_norm:
outputs = self.forward_pre(
hidden_states=hidden_states,
level_index=level_index,
position_embeddings=position_embeddings,
query_position_embeddings=query_position_embeddings,
encoder_hidden_states=encoder_hidden_states,
encoder_attention_mask=encoder_attention_mask,
output_attentions=output_attentions,
)
else:
outputs = self.forward_post(
hidden_states=hidden_states,
level_index=level_index,
position_embeddings=position_embeddings,
query_position_embeddings=query_position_embeddings,
encoder_hidden_states=encoder_hidden_states,
encoder_attention_mask=encoder_attention_mask,
output_attentions=output_attentions,
)
return outputs
class Mask2FormerMaskedAttentionDecoder(nn.Module):
"""
Transformer decoder consisting of *config.decoder_layers* layers. Each layer is a
[`Mask2FormerMaskedAttentionDecoderLayer`]. The decoder updates the query embeddings through multiple cross
(masked) and self-attention layers. The decoder uses a new **masked attention** mechanism instead of the standard
cross-attention, which extracts localized features by constraining cross-attention to within the foreground region
of the predicted mask for each query, instead of attending to the full feature map.
Args:
config (`Mask2FormerConfig`):
Configuration used to instantiate Mask2FormerMaskedAttentionDecoder.
"""
def __init__(self, config: Mask2FormerConfig):
super().__init__()
self.config = config
self.mask_feature_size = config.mask_feature_size
self.dropout = config.dropout
self.layerdrop = config.dropout
self.num_feature_levels = 3 # level embedding (3 scales)
self.decoder_layers = config.decoder_layers - 1
self.layers = nn.ModuleList(
[Mask2FormerMaskedAttentionDecoderLayer(self.config) for _ in range(self.decoder_layers)]
)
self.layernorm = nn.LayerNorm(config.hidden_dim)
self.mask_predictor = Mask2FormerMaskPredictor(
hidden_size=config.hidden_dim,
num_heads=config.num_attention_heads,
mask_feature_size=self.mask_feature_size,
)
self.gradient_checkpointing = False
def forward(
self,
inputs_embeds: torch.Tensor = None,
multi_stage_positional_embeddings: torch.Tensor = None,
pixel_embeddings: torch.Tensor = None,
encoder_hidden_states: torch.Tensor = None,
query_position_embeddings: torch.Tensor = None,
feature_size_list: List = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
):
r"""
Args:
inputs_embeds (`torch.FloatTensor` of shape `(num_queries, batch_size, hidden_size)`):
The query embeddings that are passed into the decoder.
multi_stage_positional_embeddings (`torch.FloatTensor` of shape `(height*width, batch_size, num_channels)`):
Position embeddings that are added to the keys in each cross(masked)-attention layer.
pixel_embeddings (`torch.FloatTensor`):
Tensor of shape `(batch_size, num_channels, height, width)`, 1/4 scale features from the last Pixel
Decoder.
query_position_embeddings (`torch.FloatTensor` of shape `(num_queries, batch_size, hidden_size)`):
, *optional*): Position embeddings that are added to the queries and keys in each self-attention layer.
encoder_hidden_states (`torch.FloatTensor` of shape `(batch_size, encoder_sequence_length, hidden_size)`):
Sequence of hidden-states at the output of the last layer of the encoder. Used in the
cross(masked)-attention of the decoder.
feature_size_list (`List[torch.Size]` ):
This is a list containing shapes (height & width) of multi-scale features from the Pixel Decoder.
output_attentions (`bool`, *optional*):
Whether or not to return the attentions tensors of all attention layers. See `attentions` under
returned tensors for more detail.
output_hidden_states (`bool`, *optional*):
Whether or not to return the hidden states of all layers. See `hidden_states` under returned tensors
for more detail.
return_dict (`bool`, *optional*):
Whether or not to return a [`~utils.ModelOutput`] instead of a plain tuple.
"""
output_attentions = output_attentions if output_attentions is not None else self.config.output_attentions
output_hidden_states = (
output_hidden_states if output_hidden_states is not None else self.config.output_hidden_states
)
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
if inputs_embeds is not None:
hidden_states = inputs_embeds
# intermediate hidden states with layernorm applied - required for predicting class logits
intermediate = ()
# decoder layers
all_hidden_states = () if output_hidden_states else None
attentions = () if output_attentions else None
# intermediate mask predictions from transformer decoder layers
intermediate_mask_predictions = ()
intermediate_hidden_states = self.layernorm(inputs_embeds)
intermediate += (intermediate_hidden_states,)
predicted_mask, attention_mask = self.mask_predictor(
intermediate_hidden_states, pixel_embeddings, feature_size_list[0]
)
intermediate_mask_predictions += (predicted_mask,)
for idx, decoder_layer in enumerate(self.layers):
if output_hidden_states:
all_hidden_states += (hidden_states,)
dropout_probability = torch.rand([])
if self.training and (dropout_probability < self.layerdrop):
continue
if self.gradient_checkpointing and self.training:
def create_custom_forward(module):
def custom_forward(*inputs):
return module(*inputs, output_attentions)
return custom_forward
layer_outputs = torch.utils.checkpoint.checkpoint(
create_custom_forward(decoder_layer),
hidden_states,
attention_mask,
encoder_hidden_states,
None,
None,
)
else:
level_index = idx % self.num_feature_levels
attention_mask[torch.where(attention_mask.sum(-1) == attention_mask.shape[-1])] = False
layer_outputs = decoder_layer(
hidden_states,
level_index=level_index,
position_embeddings=multi_stage_positional_embeddings,
query_position_embeddings=query_position_embeddings,
encoder_hidden_states=encoder_hidden_states,
encoder_attention_mask=attention_mask,
output_attentions=output_attentions,
)
intermediate_hidden_states = self.layernorm(layer_outputs[0])
predicted_mask, attention_mask = self.mask_predictor(
intermediate_hidden_states,
pixel_embeddings,
feature_size_list[(idx + 1) % self.num_feature_levels],
)
intermediate_mask_predictions += (predicted_mask,)
# add intermediate hidden states with layer norm applied which will be used for predicting class logits
intermediate += (intermediate_hidden_states,)
hidden_states = layer_outputs[0]
if output_attentions:
attentions += (layer_outputs[1],)
# add hidden states from the last decoder layer
if output_hidden_states:
all_hidden_states += (hidden_states,)
hidden_states = hidden_states.transpose(1, 0)
if not return_dict:
outputs = [hidden_states, all_hidden_states, attentions, intermediate, intermediate_mask_predictions]
return tuple(v for v in outputs if v is not None)
return Mask2FormerMaskedAttentionDecoderOutput(
last_hidden_state=hidden_states,
hidden_states=all_hidden_states,
attentions=attentions,
intermediate_hidden_states=intermediate,
masks_queries_logits=intermediate_mask_predictions,
)
# Copied from transformers.models.maskformer.modeling_maskformer.PredictionBlock with MaskFormer->Mask2Former
class Mask2FormerPredictionBlock(nn.Module):
def __init__(self, in_dim: int, out_dim: int, activation: nn.Module) -> None:
super().__init__()
self.layers = [nn.Linear(in_dim, out_dim), activation]
# Maintain submodule indexing as if part of a Sequential block
for i, layer in enumerate(self.layers):
self.add_module(str(i), layer)
def forward(self, input: Tensor) -> Tensor:
hidden_state = input
for layer in self.layers:
hidden_state = layer(hidden_state)
return hidden_state
class Mask2FormerMLPPredictionHead(nn.Module):
def __init__(self, input_dim: int, hidden_dim: int, output_dim: int, num_layers: int = 3):
"""
A classic Multi Layer Perceptron (MLP).
Args:
input_dim (`int`):
The input dimensions.
hidden_dim (`int`):
The hidden dimensions.
output_dim (`int`):
The output dimensions.
num_layers (int, *optional*, defaults to 3):
The number of layers.
"""
super().__init__()
in_dims = [input_dim] + [hidden_dim] * (num_layers - 1)
out_dims = [hidden_dim] * (num_layers - 1) + [output_dim]
self.layers = []
for i, (in_dim, out_dim) in enumerate(zip(in_dims, out_dims)):
activation = nn.ReLU() if i < num_layers - 1 else nn.Identity()
layer = Mask2FormerPredictionBlock(in_dim, out_dim, activation=activation)
self.layers.append(layer)
# Provide backwards compatibility from when the class inherited from nn.Sequential
# In nn.Sequential subclasses, the name given to the layer is its index in the sequence.
# In nn.Module subclasses they derived from the instance attribute they are assigned to e.g.
# self.my_layer_name = Layer()
# We can't give instance attributes integer names i.e. self.0 is not permitted and so need to register
# explicitly
self.add_module(str(i), layer)
def forward(self, input: Tensor) -> Tensor:
hidden_state = input
for layer in self.layers:
hidden_state = layer(hidden_state)
return hidden_state
class Mask2FormerMaskPredictor(nn.Module):
def __init__(self, hidden_size: int, num_heads: int, mask_feature_size: torch.Tensor):
"""
This class is used to get the predicted mask for a given Mask2FormerMaskedAttentionDecoder layer. It also
generates the binarized attention mask associated with the given predicted mask. The attention mask obtained
using predicted mask of the (l-1)th decoder layer is fed to the cross(masked)-attention block of the next
decoder layer as input.
Args:
hidden_size (`int`):
The feature dimension of the Mask2FormerMaskedAttentionDecoder
num_heads (`int`):
The number of heads used in the Mask2FormerMaskedAttentionDecoder
mask_feature_size (`torch.Tensor`):
one of the output dimensions of the predicted masks for each query
"""
super().__init__()
self.hidden_size = hidden_size
self.num_heads = num_heads
self.mask_embedder = Mask2FormerMLPPredictionHead(self.hidden_size, self.hidden_size, mask_feature_size)
def forward(self, outputs: torch.Tensor, pixel_embeddings: torch.Tensor, attention_mask_target_size: int = None):
mask_embeddings = self.mask_embedder(outputs.transpose(0, 1))
# Sum up over the channels
outputs_mask = torch.einsum("bqc, bchw -> bqhw", mask_embeddings, pixel_embeddings)
attention_mask = nn.functional.interpolate(
outputs_mask, size=attention_mask_target_size, mode="bilinear", align_corners=False
)
attention_mask = attention_mask.sigmoid().flatten(2).unsqueeze(1).repeat(1, self.num_heads, 1, 1)
attention_mask = (attention_mask.flatten(0, 1) < 0.5).bool()
attention_mask = attention_mask.detach()
return outputs_mask, attention_mask
class Mask2FormerTransformerModule(nn.Module):
"""
The Mask2Former's transformer module.
"""
def __init__(self, in_features: int, config: Mask2FormerConfig):
super().__init__()
hidden_dim = config.hidden_dim
self.num_feature_levels = 3
self.position_embedder = Mask2FormerSinePositionEmbedding(num_pos_feats=hidden_dim // 2, normalize=True)
self.queries_embedder = nn.Embedding(config.num_queries, hidden_dim)
self.queries_features = nn.Embedding(config.num_queries, hidden_dim)
self.input_projections = []
for _ in range(self.num_feature_levels):
if in_features != hidden_dim or config.enforce_input_projection:
self.input_projections.append(nn.Conv2d(in_features, hidden_dim, kernel_size=1))
else:
self.input_projections.append(nn.Sequential())
self.decoder = Mask2FormerMaskedAttentionDecoder(config=config)
self.level_embed = nn.Embedding(self.num_feature_levels, hidden_dim)
def forward(
self,
multi_scale_features: List[Tensor],
mask_features: Tensor,
output_hidden_states: bool = False,
output_attentions: bool = False,
) -> Mask2FormerMaskedAttentionDecoderOutput:
multi_stage_features = []
multi_stage_positional_embeddings = []
size_list = []
for i in range(self.num_feature_levels):
size_list.append(multi_scale_features[i].shape[-2:])
multi_stage_positional_embeddings.append(self.position_embedder(multi_scale_features[i], None).flatten(2))
multi_stage_features.append(
self.input_projections[i](multi_scale_features[i]).flatten(2)
+ self.level_embed.weight[i][None, :, None]
)
# Flatten (batch_size, num_channels, height, width) -> (height*width, batch_size, num_channels)
multi_stage_positional_embeddings[-1] = multi_stage_positional_embeddings[-1].permute(2, 0, 1)
multi_stage_features[-1] = multi_stage_features[-1].permute(2, 0, 1)
_, batch_size, _ = multi_stage_features[0].shape
# [num_queries, batch_size, num_channels]
query_embeddings = self.queries_embedder.weight.unsqueeze(1).repeat(1, batch_size, 1)
query_features = self.queries_features.weight.unsqueeze(1).repeat(1, batch_size, 1)
decoder_output = self.decoder(
inputs_embeds=query_features,
multi_stage_positional_embeddings=multi_stage_positional_embeddings,
pixel_embeddings=mask_features,
encoder_hidden_states=multi_stage_features,
query_position_embeddings=query_embeddings,
feature_size_list=size_list,
output_hidden_states=output_hidden_states,
output_attentions=output_attentions,
return_dict=True,
)
return decoder_output
MASK2FORMER_START_DOCSTRING = r"""
This model is a PyTorch [torch.nn.Module](https://pytorch.org/docs/stable/nn.html#torch.nn.Module) sub-class. Use
it as a regular PyTorch Module and refer to the PyTorch documentation for all matter related to general usage and
behavior.
Parameters:
config ([`Mask2FormerConfig`]): Model configuration class with all the parameters of the model.
Initializing with a config file does not load the weights associated with the model, only the
configuration. Check out the [`~PreTrainedModel.from_pretrained`] method to load the model weights.
"""
MASK2FORMER_INPUTS_DOCSTRING = r"""
Args:
pixel_values (`torch.FloatTensor` of shape `(batch_size, num_channels, height, width)`):
Pixel values. Pixel values can be obtained using [`AutoImageProcessor`]. See
[`AutoImageProcessor.preprocess`] for details.
pixel_mask (`torch.LongTensor` of shape `(batch_size, height, width)`, *optional*):
Mask to avoid performing attention on padding pixel values. Mask values selected in `[0, 1]`:
- 1 for pixels that are real (i.e. **not masked**),
- 0 for pixels that are padding (i.e. **masked**).
[What are attention masks?](../glossary#attention-mask)
output_hidden_states (`bool`, *optional*):
Whether or not to return the hidden states of all layers. See `hidden_states` under returned tensors for
more detail.
output_attentions (`bool`, *optional*):
Whether or not to return the attentions tensors of Detr's decoder attention layers.
return_dict (`bool`, *optional*):
Whether or not to return a [`~Mask2FormerModelOutput`] instead of a plain tuple.
"""
class Mask2FormerPreTrainedModel(PreTrainedModel):
config_class = Mask2FormerConfig
base_model_prefix = "model"
main_input_name = "pixel_values"
def _init_weights(self, module: nn.Module):
xavier_std = self.config.init_xavier_std
std = self.config.init_std
if isinstance(module, Mask2FormerTransformerModule):
if module.input_projections is not None:
for input_projection in module.input_projections:
if not isinstance(input_projection, nn.Sequential):
nn.init.xavier_uniform_(input_projection.weight, gain=xavier_std)
nn.init.constant_(input_projection.bias, 0)
elif isinstance(module, Mask2FormerPixelDecoderEncoderMultiscaleDeformableAttention):
nn.init.constant_(module.sampling_offsets.weight.data, 0.0)
thetas = torch.arange(module.n_heads, dtype=torch.float32) * (2.0 * math.pi / module.n_heads)
grid_init = torch.stack([thetas.cos(), thetas.sin()], -1)
grid_init = (
(grid_init / grid_init.abs().max(-1, keepdim=True)[0])
.view(module.n_heads, 1, 1, 2)
.repeat(1, module.n_levels, module.n_points, 1)
)
for i in range(module.n_points):
grid_init[:, :, i, :] *= i + 1
with torch.no_grad():
module.sampling_offsets.bias = nn.Parameter(grid_init.view(-1))
nn.init.constant_(module.attention_weights.weight.data, 0.0)
nn.init.constant_(module.attention_weights.bias.data, 0.0)
nn.init.xavier_uniform_(module.value_proj.weight.data)
nn.init.constant_(module.value_proj.bias.data, 0.0)
nn.init.xavier_uniform_(module.output_proj.weight.data)
nn.init.constant_(module.output_proj.bias.data, 0.0)
elif isinstance(module, Mask2FormerMaskedAttentionDecoderLayer):
for p in module.parameters():
if p.dim() > 1:
nn.init.xavier_uniform_(p, gain=xavier_std)
elif isinstance(module, Mask2FormerPixelLevelModule):
for submodule in module.modules():
if isinstance(submodule, (nn.Conv2d, nn.Linear)):
submodule.weight.data.normal_(mean=0.0, std=std)
if submodule.bias is not None:
submodule.bias.data.zero_()
elif isinstance(module, Mask2FormerPixelDecoder):
for p in module.parameters():
if p.dim() > 1:
nn.init.xavier_uniform_(p)
nn.init.normal_(module.level_embed, std=0)
elif isinstance(module, Mask2FormerPixelDecoderEncoderOnly):
for p in module.parameters():
if p.dim() > 1:
nn.init.xavier_uniform_(p)
elif isinstance(module, (nn.Linear, nn.Conv2d, nn.BatchNorm2d)):
module.weight.data.normal_(mean=0.0, std=std)
if module.bias is not None:
module.bias.data.zero_()
elif isinstance(module, nn.Embedding):
module.weight.data.normal_(mean=0.0, std=std)
if module.padding_idx is not None:
module.weight.data[module.padding_idx].zero_()
if hasattr(module, "reference_points"):
nn.init.xavier_uniform_(module.reference_points.weight.data, gain=1.0)
nn.init.constant_(module.reference_points.bias.data, 0.0)
@add_start_docstrings(
"The bare Mask2Former Model outputting raw hidden-states without any specific head on top.",
MASK2FORMER_START_DOCSTRING,
)
class Mask2FormerModel(Mask2FormerPreTrainedModel):
main_input_name = "pixel_values"
def __init__(self, config: Mask2FormerConfig):
super().__init__(config)
self.pixel_level_module = Mask2FormerPixelLevelModule(config)
self.transformer_module = Mask2FormerTransformerModule(in_features=config.feature_size, config=config)
self.post_init()
@add_start_docstrings_to_model_forward(MASK2FORMER_INPUTS_DOCSTRING)
@replace_return_docstrings(output_type=Mask2FormerModelOutput, config_class=_CONFIG_FOR_DOC)
def forward(
self,
pixel_values: Tensor,
pixel_mask: Optional[Tensor] = None,
output_hidden_states: Optional[bool] = None,
output_attentions: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Mask2FormerModelOutput:
r"""
Returns:
`Mask2FormerModelOutput`
Examples:
```python
>>> import torch
>>> from PIL import Image
>>> import requests
>>> from transformers import AutoImageProcessor, Mask2FormerModel
>>> # load image
>>> url = "http://images.cocodataset.org/val2017/000000039769.jpg"
>>> image = Image.open(requests.get(url, stream=True).raw)
>>> # load image preprocessor and Mask2FormerModel trained on COCO instance segmentation dataset
>>> image_processor = AutoImageProcessor.from_pretrained("facebook/mask2former-swin-small-coco-instance")
>>> model = Mask2FormerModel.from_pretrained("facebook/mask2former-swin-small-coco-instance")
>>> inputs = image_processor(image, return_tensors="pt")
>>> # forward pass
>>> with torch.no_grad():
... outputs = model(**inputs)
>>> # model outputs last hidden states of shape (batch_size, num_queries, hidden_size)
>>> print(outputs.transformer_decoder_last_hidden_state.shape)
torch.Size([1, 100, 256])
```
"""
output_attentions = output_attentions if output_attentions is not None else self.config.output_attentions
output_hidden_states = (
output_hidden_states if output_hidden_states is not None else self.config.output_hidden_states
)
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
batch_size, _, height, width = pixel_values.shape
if pixel_mask is None:
pixel_mask = torch.ones((batch_size, height, width), device=pixel_values.device)
pixel_level_module_output = self.pixel_level_module(
pixel_values=pixel_values, output_hidden_states=output_hidden_states
)
transformer_module_output = self.transformer_module(
multi_scale_features=pixel_level_module_output.decoder_hidden_states,
mask_features=pixel_level_module_output.decoder_last_hidden_state,
output_hidden_states=True,
output_attentions=output_attentions,
)
encoder_hidden_states = None
pixel_decoder_hidden_states = None
transformer_decoder_hidden_states = None
transformer_decoder_intermediate_states = None
if output_hidden_states:
encoder_hidden_states = pixel_level_module_output.encoder_hidden_states
pixel_decoder_hidden_states = pixel_level_module_output.decoder_hidden_states
transformer_decoder_hidden_states = transformer_module_output.hidden_states
transformer_decoder_intermediate_states = transformer_module_output.intermediate_hidden_states
output = Mask2FormerModelOutput(
encoder_last_hidden_state=pixel_level_module_output.encoder_last_hidden_state,
pixel_decoder_last_hidden_state=pixel_level_module_output.decoder_last_hidden_state,
transformer_decoder_last_hidden_state=transformer_module_output.last_hidden_state,
encoder_hidden_states=encoder_hidden_states,
pixel_decoder_hidden_states=pixel_decoder_hidden_states,
transformer_decoder_hidden_states=transformer_decoder_hidden_states,
transformer_decoder_intermediate_states=transformer_decoder_intermediate_states,
attentions=transformer_module_output.attentions,
masks_queries_logits=transformer_module_output.masks_queries_logits,
)
if not return_dict:
output = tuple(v for v in output.values() if v is not None)
return output
@add_start_docstrings(
"The Mask2Former Model with heads on top for instance/semantic/panoptic segmentation.",
MASK2FORMER_START_DOCSTRING,
)
class Mask2FormerForUniversalSegmentation(Mask2FormerPreTrainedModel):
main_input_name = "pixel_values"
def __init__(self, config: Mask2FormerConfig):
super().__init__(config)
self.model = Mask2FormerModel(config)
self.weight_dict: Dict[str, float] = {
"loss_cross_entropy": config.class_weight,
"loss_mask": config.mask_weight,
"loss_dice": config.dice_weight,
}
self.class_predictor = nn.Linear(config.hidden_dim, config.num_labels + 1)
self.criterion = Mask2FormerLoss(config=config, weight_dict=self.weight_dict)
self.post_init()
def get_loss_dict(
self,
masks_queries_logits: Tensor,
class_queries_logits: Tensor,
mask_labels: Tensor,
class_labels: Tensor,
auxiliary_predictions: Dict[str, Tensor],
) -> Dict[str, Tensor]:
loss_dict: Dict[str, Tensor] = self.criterion(
masks_queries_logits=masks_queries_logits,
class_queries_logits=class_queries_logits,
mask_labels=mask_labels,
class_labels=class_labels,
auxiliary_predictions=auxiliary_predictions,
)
# weight each loss by `self.weight_dict[<LOSS_NAME>]` including auxiliary losses
for key, weight in self.weight_dict.items():
for loss_key, loss in loss_dict.items():
if key in loss_key:
loss *= weight
return loss_dict
def get_loss(self, loss_dict: Dict[str, Tensor]) -> Tensor:
return sum(loss_dict.values())
def get_auxiliary_logits(self, classes: torch.Tensor, output_masks: torch.Tensor):
auxiliary_logits: List[Dict(str, Tensor)] = []
for aux_binary_masks, aux_classes in zip(output_masks[:-1], classes[:-1]):
auxiliary_logits.append({"masks_queries_logits": aux_binary_masks, "class_queries_logits": aux_classes})
return auxiliary_logits
@add_start_docstrings_to_model_forward(MASK2FORMER_INPUTS_DOCSTRING)
@replace_return_docstrings(output_type=Mask2FormerForUniversalSegmentationOutput, config_class=_CONFIG_FOR_DOC)
def forward(
self,
pixel_values: Tensor,
mask_labels: Optional[List[Tensor]] = None,
class_labels: Optional[List[Tensor]] = None,
pixel_mask: Optional[Tensor] = None,
output_hidden_states: Optional[bool] = None,
output_auxiliary_logits: Optional[bool] = None,
output_attentions: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Mask2FormerForUniversalSegmentationOutput:
r"""
mask_labels (`List[torch.Tensor]`, *optional*):
List of mask labels of shape `(num_labels, height, width)` to be fed to a model
class_labels (`List[torch.LongTensor]`, *optional*):
list of target class labels of shape `(num_labels, height, width)` to be fed to a model. They identify the
labels of `mask_labels`, e.g. the label of `mask_labels[i][j]` if `class_labels[i][j]`.
Returns:
`Mask2FormerUniversalSegmentationOutput`
Examples:
Instance segmentation example:
```python
>>> from transformers import AutoImageProcessor, Mask2FormerForUniversalSegmentation
>>> from PIL import Image
>>> import requests
>>> import torch
>>> # Load Mask2Former trained on COCO instance segmentation dataset
>>> image_processor = AutoImageProcessor.from_pretrained("facebook/mask2former-swin-small-coco-instance")
>>> model = Mask2FormerForUniversalSegmentation.from_pretrained(
... "facebook/mask2former-swin-small-coco-instance"
... )
>>> url = "http://images.cocodataset.org/val2017/000000039769.jpg"
>>> image = Image.open(requests.get(url, stream=True).raw)
>>> inputs = image_processor(image, return_tensors="pt")
>>> with torch.no_grad():
... outputs = model(**inputs)
>>> # Model predicts class_queries_logits of shape `(batch_size, num_queries)`
>>> # and masks_queries_logits of shape `(batch_size, num_queries, height, width)`
>>> class_queries_logits = outputs.class_queries_logits
>>> masks_queries_logits = outputs.masks_queries_logits
>>> # Perform post-processing to get instance segmentation map
>>> pred_instance_map = image_processor.post_process_semantic_segmentation(
... outputs, target_sizes=[image.size[::-1]]
... )[0]
>>> print(pred_instance_map.shape)
torch.Size([480, 640])
```
Semantic segmentation example:
```python
>>> from transformers import AutoImageProcessor, Mask2FormerForUniversalSegmentation
>>> from PIL import Image
>>> import requests
>>> import torch
>>> # Load Mask2Former trained on ADE20k semantic segmentation dataset
>>> image_processor = AutoImageProcessor.from_pretrained("facebook/mask2former-swin-small-ade-semantic")
>>> model = Mask2FormerForUniversalSegmentation.from_pretrained("facebook/mask2former-swin-small-ade-semantic")
>>> url = (
... "https://huggingface.co/datasets/hf-internal-testing/fixtures_ade20k/resolve/main/ADE_val_00000001.jpg"
... )
>>> image = Image.open(requests.get(url, stream=True).raw)
>>> inputs = image_processor(image, return_tensors="pt")
>>> with torch.no_grad():
... outputs = model(**inputs)
>>> # Model predicts class_queries_logits of shape `(batch_size, num_queries)`
>>> # and masks_queries_logits of shape `(batch_size, num_queries, height, width)`
>>> class_queries_logits = outputs.class_queries_logits
>>> masks_queries_logits = outputs.masks_queries_logits
>>> # Perform post-processing to get semantic segmentation map
>>> pred_semantic_map = image_processor.post_process_semantic_segmentation(
... outputs, target_sizes=[image.size[::-1]]
... )[0]
>>> print(pred_semantic_map.shape)
torch.Size([512, 683])
```
Panoptic segmentation example:
```python
>>> from transformers import AutoImageProcessor, Mask2FormerForUniversalSegmentation
>>> from PIL import Image
>>> import requests
>>> import torch
>>> # Load Mask2Former trained on CityScapes panoptic segmentation dataset
>>> image_processor = AutoImageProcessor.from_pretrained("facebook/mask2former-swin-small-cityscapes-panoptic")
>>> model = Mask2FormerForUniversalSegmentation.from_pretrained(
... "facebook/mask2former-swin-small-cityscapes-panoptic"
... )
>>> url = "https://cdn-media.huggingface.co/Inference-API/Sample-results-on-the-Cityscapes-dataset-The-above-images-show-how-our-method-can-handle.png"
>>> image = Image.open(requests.get(url, stream=True).raw)
>>> inputs = image_processor(image, return_tensors="pt")
>>> with torch.no_grad():
... outputs = model(**inputs)
>>> # Model predicts class_queries_logits of shape `(batch_size, num_queries)`
>>> # and masks_queries_logits of shape `(batch_size, num_queries, height, width)`
>>> class_queries_logits = outputs.class_queries_logits
>>> masks_queries_logits = outputs.masks_queries_logits
>>> # Perform post-processing to get panoptic segmentation map
>>> pred_panoptic_map = image_processor.post_process_panoptic_segmentation(
... outputs, target_sizes=[image.size[::-1]]
... )[0]["segmentation"]
>>> print(pred_panoptic_map.shape)
torch.Size([338, 676])
```
"""
output_attentions = output_attentions if output_attentions is not None else self.config.output_attentions
output_hidden_states = (
output_hidden_states if output_hidden_states is not None else self.config.output_hidden_states
)
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
outputs = self.model(
pixel_values=pixel_values,
pixel_mask=pixel_mask,
output_hidden_states=output_hidden_states or self.config.use_auxiliary_loss,
output_attentions=output_attentions,
return_dict=True,
)
loss, loss_dict, auxiliary_logits = None, None, None
class_queries_logits = ()
for decoder_output in outputs.transformer_decoder_intermediate_states:
class_prediction = self.class_predictor(decoder_output.transpose(0, 1))
class_queries_logits += (class_prediction,)
masks_queries_logits = outputs.masks_queries_logits
auxiliary_logits = self.get_auxiliary_logits(class_queries_logits, masks_queries_logits)
if mask_labels is not None and class_labels is not None:
loss_dict = self.get_loss_dict(
masks_queries_logits=masks_queries_logits[-1],
class_queries_logits=class_queries_logits[-1],
mask_labels=mask_labels,
class_labels=class_labels,
auxiliary_predictions=auxiliary_logits,
)
loss = self.get_loss(loss_dict)
encoder_hidden_states = None
pixel_decoder_hidden_states = None
transformer_decoder_hidden_states = None
if output_hidden_states:
encoder_hidden_states = outputs.encoder_hidden_states
pixel_decoder_hidden_states = outputs.pixel_decoder_hidden_states
transformer_decoder_hidden_states = outputs.transformer_decoder_hidden_states
output_auxiliary_logits = (
self.config.output_auxiliary_logits if output_auxiliary_logits is None else output_auxiliary_logits
)
if not output_auxiliary_logits:
auxiliary_logits = None
output = Mask2FormerForUniversalSegmentationOutput(
loss=loss,
class_queries_logits=class_queries_logits[-1],
masks_queries_logits=masks_queries_logits[-1],
auxiliary_logits=auxiliary_logits,
encoder_last_hidden_state=outputs.encoder_last_hidden_state,
pixel_decoder_last_hidden_state=outputs.pixel_decoder_last_hidden_state,
transformer_decoder_last_hidden_state=outputs.transformer_decoder_last_hidden_state,
encoder_hidden_states=encoder_hidden_states,
pixel_decoder_hidden_states=pixel_decoder_hidden_states,
transformer_decoder_hidden_states=transformer_decoder_hidden_states,
attentions=outputs.attentions,
)
if not return_dict:
output = tuple(v for v in output.values() if v is not None)
if loss is not None:
output = ((loss)) + output
return output
| 120,588 | 46.123486 | 211 | py |
transformers | transformers-main/src/transformers/models/mask2former/__init__.py | # Copyright 2022 The HuggingFace Team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
from typing import TYPE_CHECKING
from ...utils import OptionalDependencyNotAvailable, _LazyModule, is_torch_available, is_vision_available
_import_structure = {
"configuration_mask2former": [
"MASK2FORMER_PRETRAINED_CONFIG_ARCHIVE_MAP",
"Mask2FormerConfig",
],
}
try:
if not is_vision_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
_import_structure["image_processing_mask2former"] = ["Mask2FormerImageProcessor"]
try:
if not is_torch_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
_import_structure["modeling_mask2former"] = [
"MASK2FORMER_PRETRAINED_MODEL_ARCHIVE_LIST",
"Mask2FormerForUniversalSegmentation",
"Mask2FormerModel",
"Mask2FormerPreTrainedModel",
]
if TYPE_CHECKING:
from .configuration_mask2former import MASK2FORMER_PRETRAINED_CONFIG_ARCHIVE_MAP, Mask2FormerConfig
try:
if not is_vision_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
from .image_processing_mask2former import Mask2FormerImageProcessor
try:
if not is_torch_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
from .modeling_mask2former import (
MASK2FORMER_PRETRAINED_MODEL_ARCHIVE_LIST,
Mask2FormerForUniversalSegmentation,
Mask2FormerModel,
Mask2FormerPreTrainedModel,
)
else:
import sys
sys.modules[__name__] = _LazyModule(__name__, globals()["__file__"], _import_structure)
| 2,357 | 30.026316 | 105 | py |
transformers | transformers-main/src/transformers/models/mask2former/image_processing_mask2former.py | # coding=utf-8
# Copyright 2022 The HuggingFace Inc. team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
"""Image processor class for Mask2Former."""
import math
import warnings
from typing import Any, Dict, Iterable, List, Optional, Set, Tuple, Union
import numpy as np
from ...image_processing_utils import BaseImageProcessor, BatchFeature, get_size_dict
from ...image_transforms import (
PaddingMode,
get_resize_output_image_size,
normalize,
pad,
rescale,
resize,
to_channel_dimension_format,
)
from ...image_utils import (
ChannelDimension,
ImageInput,
PILImageResampling,
get_image_size,
infer_channel_dimension_format,
is_batched,
to_numpy_array,
valid_images,
)
from ...utils import (
IMAGENET_DEFAULT_MEAN,
IMAGENET_DEFAULT_STD,
TensorType,
is_torch_available,
is_torch_tensor,
logging,
)
logger = logging.get_logger(__name__)
if is_torch_available():
import torch
from torch import nn
# Copied from transformers.models.detr.image_processing_detr.max_across_indices
def max_across_indices(values: Iterable[Any]) -> List[Any]:
"""
Return the maximum value across all indices of an iterable of values.
"""
return [max(values_i) for values_i in zip(*values)]
# Copied from transformers.models.detr.image_processing_detr.get_max_height_width
def get_max_height_width(images: List[np.ndarray]) -> List[int]:
"""
Get the maximum height and width across all images in a batch.
"""
input_channel_dimension = infer_channel_dimension_format(images[0])
if input_channel_dimension == ChannelDimension.FIRST:
_, max_height, max_width = max_across_indices([img.shape for img in images])
elif input_channel_dimension == ChannelDimension.LAST:
max_height, max_width, _ = max_across_indices([img.shape for img in images])
else:
raise ValueError(f"Invalid channel dimension format: {input_channel_dimension}")
return (max_height, max_width)
# Copied from transformers.models.detr.image_processing_detr.make_pixel_mask
def make_pixel_mask(image: np.ndarray, output_size: Tuple[int, int]) -> np.ndarray:
"""
Make a pixel mask for the image, where 1 indicates a valid pixel and 0 indicates padding.
Args:
image (`np.ndarray`):
Image to make the pixel mask for.
output_size (`Tuple[int, int]`):
Output size of the mask.
"""
input_height, input_width = get_image_size(image)
mask = np.zeros(output_size, dtype=np.int64)
mask[:input_height, :input_width] = 1
return mask
# Copied from transformers.models.detr.image_processing_detr.binary_mask_to_rle
def binary_mask_to_rle(mask):
"""
Converts given binary mask of shape `(height, width)` to the run-length encoding (RLE) format.
Args:
mask (`torch.Tensor` or `numpy.array`):
A binary mask tensor of shape `(height, width)` where 0 denotes background and 1 denotes the target
segment_id or class_id.
Returns:
`List`: Run-length encoded list of the binary mask. Refer to COCO API for more information about the RLE
format.
"""
if is_torch_tensor(mask):
mask = mask.numpy()
pixels = mask.flatten()
pixels = np.concatenate([[0], pixels, [0]])
runs = np.where(pixels[1:] != pixels[:-1])[0] + 1
runs[1::2] -= runs[::2]
return list(runs)
# Copied from transformers.models.detr.image_processing_detr.convert_segmentation_to_rle
def convert_segmentation_to_rle(segmentation):
"""
Converts given segmentation map of shape `(height, width)` to the run-length encoding (RLE) format.
Args:
segmentation (`torch.Tensor` or `numpy.array`):
A segmentation map of shape `(height, width)` where each value denotes a segment or class id.
Returns:
`List[List]`: A list of lists, where each list is the run-length encoding of a segment / class id.
"""
segment_ids = torch.unique(segmentation)
run_length_encodings = []
for idx in segment_ids:
mask = torch.where(segmentation == idx, 1, 0)
rle = binary_mask_to_rle(mask)
run_length_encodings.append(rle)
return run_length_encodings
# Copied from transformers.models.detr.image_processing_detr.remove_low_and_no_objects
def remove_low_and_no_objects(masks, scores, labels, object_mask_threshold, num_labels):
"""
Binarize the given masks using `object_mask_threshold`, it returns the associated values of `masks`, `scores` and
`labels`.
Args:
masks (`torch.Tensor`):
A tensor of shape `(num_queries, height, width)`.
scores (`torch.Tensor`):
A tensor of shape `(num_queries)`.
labels (`torch.Tensor`):
A tensor of shape `(num_queries)`.
object_mask_threshold (`float`):
A number between 0 and 1 used to binarize the masks.
Raises:
`ValueError`: Raised when the first dimension doesn't match in all input tensors.
Returns:
`Tuple[`torch.Tensor`, `torch.Tensor`, `torch.Tensor`]`: The `masks`, `scores` and `labels` without the region
< `object_mask_threshold`.
"""
if not (masks.shape[0] == scores.shape[0] == labels.shape[0]):
raise ValueError("mask, scores and labels must have the same shape!")
to_keep = labels.ne(num_labels) & (scores > object_mask_threshold)
return masks[to_keep], scores[to_keep], labels[to_keep]
# Copied from transformers.models.detr.image_processing_detr.check_segment_validity
def check_segment_validity(mask_labels, mask_probs, k, mask_threshold=0.5, overlap_mask_area_threshold=0.8):
# Get the mask associated with the k class
mask_k = mask_labels == k
mask_k_area = mask_k.sum()
# Compute the area of all the stuff in query k
original_area = (mask_probs[k] >= mask_threshold).sum()
mask_exists = mask_k_area > 0 and original_area > 0
# Eliminate disconnected tiny segments
if mask_exists:
area_ratio = mask_k_area / original_area
if not area_ratio.item() > overlap_mask_area_threshold:
mask_exists = False
return mask_exists, mask_k
# Copied from transformers.models.detr.image_processing_detr.compute_segments
def compute_segments(
mask_probs,
pred_scores,
pred_labels,
mask_threshold: float = 0.5,
overlap_mask_area_threshold: float = 0.8,
label_ids_to_fuse: Optional[Set[int]] = None,
target_size: Tuple[int, int] = None,
):
height = mask_probs.shape[1] if target_size is None else target_size[0]
width = mask_probs.shape[2] if target_size is None else target_size[1]
segmentation = torch.zeros((height, width), dtype=torch.int32, device=mask_probs.device)
segments: List[Dict] = []
if target_size is not None:
mask_probs = nn.functional.interpolate(
mask_probs.unsqueeze(0), size=target_size, mode="bilinear", align_corners=False
)[0]
current_segment_id = 0
# Weigh each mask by its prediction score
mask_probs *= pred_scores.view(-1, 1, 1)
mask_labels = mask_probs.argmax(0) # [height, width]
# Keep track of instances of each class
stuff_memory_list: Dict[str, int] = {}
for k in range(pred_labels.shape[0]):
pred_class = pred_labels[k].item()
should_fuse = pred_class in label_ids_to_fuse
# Check if mask exists and large enough to be a segment
mask_exists, mask_k = check_segment_validity(
mask_labels, mask_probs, k, mask_threshold, overlap_mask_area_threshold
)
if mask_exists:
if pred_class in stuff_memory_list:
current_segment_id = stuff_memory_list[pred_class]
else:
current_segment_id += 1
# Add current object segment to final segmentation map
segmentation[mask_k] = current_segment_id
segment_score = round(pred_scores[k].item(), 6)
segments.append(
{
"id": current_segment_id,
"label_id": pred_class,
"was_fused": should_fuse,
"score": segment_score,
}
)
if should_fuse:
stuff_memory_list[pred_class] = current_segment_id
return segmentation, segments
# TODO: (Amy) Move to image_transforms
def convert_segmentation_map_to_binary_masks(
segmentation_map: "np.ndarray",
instance_id_to_semantic_id: Optional[Dict[int, int]] = None,
ignore_index: Optional[int] = None,
reduce_labels: bool = False,
):
if reduce_labels and ignore_index is None:
raise ValueError("If `reduce_labels` is True, `ignore_index` must be provided.")
if reduce_labels:
segmentation_map = np.where(segmentation_map == 0, ignore_index, segmentation_map - 1)
# Get unique ids (class or instance ids based on input)
all_labels = np.unique(segmentation_map)
# Drop background label if applicable
if ignore_index is not None:
all_labels = all_labels[all_labels != ignore_index]
# Generate a binary mask for each object instance
binary_masks = [(segmentation_map == i) for i in all_labels]
binary_masks = np.stack(binary_masks, axis=0) # (num_labels, height, width)
# Convert instance ids to class ids
if instance_id_to_semantic_id is not None:
labels = np.zeros(all_labels.shape[0])
for label in all_labels:
class_id = instance_id_to_semantic_id[label + 1 if reduce_labels else label]
labels[all_labels == label] = class_id - 1 if reduce_labels else class_id
else:
labels = all_labels
return binary_masks.astype(np.float32), labels.astype(np.int64)
def get_mask2former_resize_output_image_size(
image: np.ndarray,
size: Union[int, Tuple[int, int], List[int], Tuple[int]],
max_size: Optional[int] = None,
size_divisor: int = 0,
default_to_square: bool = True,
) -> tuple:
"""
Computes the output size given the desired size.
Args:
input_image (`np.ndarray`):
The input image.
size (`int`, `Tuple[int, int]`, `List[int]`, `Tuple[int]`):
The size of the output image.
default_to_square (`bool`, *optional*, defaults to `True`):
Whether to default to square if no size is provided.
max_size (`int`, *optional*):
The maximum size of the output image.
size_divisible (`int`, *optional*, defaults to `0`):
If size_divisible is given, the output image size will be divisible by the number.
Returns:
`Tuple[int, int]`: The output size.
"""
output_size = get_resize_output_image_size(
input_image=image, size=size, default_to_square=default_to_square, max_size=max_size
)
if size_divisor > 0:
height, width = output_size
height = int(math.ceil(height / size_divisor) * size_divisor)
width = int(math.ceil(width / size_divisor) * size_divisor)
output_size = (height, width)
return output_size
class Mask2FormerImageProcessor(BaseImageProcessor):
r"""
Constructs a Mask2Former image processor. The image processor can be used to prepare image(s) and optional targets
for the model.
This image processor inherits from [`BaseImageProcessor`] which contains most of the main methods. Users should
refer to this superclass for more information regarding those methods.
Args:
do_resize (`bool`, *optional*, defaults to `True`):
Whether to resize the input to a certain `size`.
size (`int`, *optional*, defaults to 800):
Resize the input to the given size. Only has an effect if `do_resize` is set to `True`. If size is a
sequence like `(width, height)`, output size will be matched to this. If size is an int, smaller edge of
the image will be matched to this number. i.e, if `height > width`, then image will be rescaled to `(size *
height / width, size)`.
max_size (`int`, *optional*, defaults to 1333):
The largest size an image dimension can have (otherwise it's capped). Only has an effect if `do_resize` is
set to `True`.
resample (`int`, *optional*, defaults to `PIL.Image.Resampling.BILINEAR`):
An optional resampling filter. This can be one of `PIL.Image.Resampling.NEAREST`,
`PIL.Image.Resampling.BOX`, `PIL.Image.Resampling.BILINEAR`, `PIL.Image.Resampling.HAMMING`,
`PIL.Image.Resampling.BICUBIC` or `PIL.Image.Resampling.LANCZOS`. Only has an effect if `do_resize` is set
to `True`.
size_divisor (`int`, *optional*, defaults to 32):
Some backbones need images divisible by a certain number. If not passed, it defaults to the value used in
Swin Transformer.
do_rescale (`bool`, *optional*, defaults to `True`):
Whether to rescale the input to a certain `scale`.
rescale_factor (`float`, *optional*, defaults to 1/ 255):
Rescale the input by the given factor. Only has an effect if `do_rescale` is set to `True`.
do_normalize (`bool`, *optional*, defaults to `True`):
Whether or not to normalize the input with mean and standard deviation.
image_mean (`int`, *optional*, defaults to `[0.485, 0.456, 0.406]`):
The sequence of means for each channel, to be used when normalizing images. Defaults to the ImageNet mean.
image_std (`int`, *optional*, defaults to `[0.229, 0.224, 0.225]`):
The sequence of standard deviations for each channel, to be used when normalizing images. Defaults to the
ImageNet std.
ignore_index (`int`, *optional*):
Label to be assigned to background pixels in segmentation maps. If provided, segmentation map pixels
denoted with 0 (background) will be replaced with `ignore_index`.
reduce_labels (`bool`, *optional*, defaults to `False`):
Whether or not to decrement all label values of segmentation maps by 1. Usually used for datasets where 0
is used for background, and background itself is not included in all classes of a dataset (e.g. ADE20k).
The background label will be replaced by `ignore_index`.
"""
model_input_names = ["pixel_values", "pixel_mask"]
def __init__(
self,
do_resize: bool = True,
size: Dict[str, int] = None,
size_divisor: int = 32,
resample: PILImageResampling = PILImageResampling.BILINEAR,
do_rescale: bool = True,
rescale_factor: float = 1 / 255,
do_normalize: bool = True,
image_mean: Union[float, List[float]] = None,
image_std: Union[float, List[float]] = None,
ignore_index: Optional[int] = None,
reduce_labels: bool = False,
**kwargs,
):
if "size_divisibility" in kwargs:
warnings.warn(
"The `size_divisibility` argument is deprecated and will be removed in v4.27. Please use "
"`size_divisor` instead.",
FutureWarning,
)
size_divisor = kwargs.pop("size_divisibility")
if "max_size" in kwargs:
warnings.warn(
"The `max_size` argument is deprecated and will be removed in v4.27. Please use size['longest_edge']"
" instead.",
FutureWarning,
)
# We make max_size a private attribute so we can pass it as a default value in the preprocess method whilst
# `size` can still be pass in as an int
self._max_size = kwargs.pop("max_size")
else:
self._max_size = 1333
size = size if size is not None else {"shortest_edge": 800, "longest_edge": self._max_size}
size = get_size_dict(size, max_size=self._max_size, default_to_square=False)
super().__init__(**kwargs)
self.do_resize = do_resize
self.size = size
self.resample = resample
self.size_divisor = size_divisor
self.do_rescale = do_rescale
self.rescale_factor = rescale_factor
self.do_normalize = do_normalize
self.image_mean = image_mean if image_mean is not None else IMAGENET_DEFAULT_MEAN
self.image_std = image_std if image_std is not None else IMAGENET_DEFAULT_STD
self.ignore_index = ignore_index
self.reduce_labels = reduce_labels
@classmethod
def from_dict(cls, image_processor_dict: Dict[str, Any], **kwargs):
"""
Overrides the `from_dict` method from the base class to make sure parameters are updated if image processor is
created using from_dict and kwargs e.g. `Mask2FormerImageProcessor.from_pretrained(checkpoint, max_size=800)`
"""
image_processor_dict = image_processor_dict.copy()
if "max_size" in kwargs:
image_processor_dict["max_size"] = kwargs.pop("max_size")
if "size_divisibility" in kwargs:
image_processor_dict["size_divisibility"] = kwargs.pop("size_divisibility")
return super().from_dict(image_processor_dict, **kwargs)
def resize(
self,
image: np.ndarray,
size: Dict[str, int],
size_divisor: int = 0,
resample: PILImageResampling = PILImageResampling.BILINEAR,
data_format=None,
**kwargs,
) -> np.ndarray:
"""
Resize the image to the given size. Size can be min_size (scalar) or `(height, width)` tuple. If size is an
int, smaller edge of the image will be matched to this number.
"""
if "max_size" in kwargs:
warnings.warn(
"The `max_size` parameter is deprecated and will be removed in v4.27. "
"Please specify in `size['longest_edge'] instead`.",
FutureWarning,
)
max_size = kwargs.pop("max_size")
else:
max_size = None
size = get_size_dict(size, max_size=max_size, default_to_square=False)
if "shortest_edge" in size and "longest_edge" in size:
size, max_size = size["shortest_edge"], size["longest_edge"]
elif "height" in size and "width" in size:
size = (size["height"], size["width"])
max_size = None
else:
raise ValueError(
"Size must contain 'height' and 'width' keys or 'shortest_edge' and 'longest_edge' keys. Got"
f" {size.keys()}."
)
size = get_mask2former_resize_output_image_size(
image=image,
size=size,
max_size=max_size,
size_divisor=size_divisor,
default_to_square=False,
)
image = resize(image, size=size, resample=resample, data_format=data_format)
return image
def rescale(
self, image: np.ndarray, rescale_factor: float, data_format: Optional[ChannelDimension] = None
) -> np.ndarray:
"""
Rescale the image by the given factor.
"""
return rescale(image, rescale_factor, data_format=data_format)
def normalize(
self,
image: np.ndarray,
mean: Union[float, Iterable[float]],
std: Union[float, Iterable[float]],
data_format: Optional[ChannelDimension] = None,
) -> np.ndarray:
"""
Normalize the image with the given mean and standard deviation.
"""
return normalize(image, mean=mean, std=std, data_format=data_format)
def convert_segmentation_map_to_binary_masks(
self,
segmentation_map: "np.ndarray",
instance_id_to_semantic_id: Optional[Dict[int, int]] = None,
ignore_index: Optional[int] = None,
reduce_labels: bool = False,
):
reduce_labels = reduce_labels if reduce_labels is not None else self.reduce_labels
ignore_index = ignore_index if ignore_index is not None else self.ignore_index
return convert_segmentation_map_to_binary_masks(
segmentation_map=segmentation_map,
instance_id_to_semantic_id=instance_id_to_semantic_id,
ignore_index=ignore_index,
reduce_labels=reduce_labels,
)
def __call__(self, images, segmentation_maps=None, **kwargs) -> BatchFeature:
return self.preprocess(images, segmentation_maps=segmentation_maps, **kwargs)
def _preprocess(
self,
image: ImageInput,
do_resize: bool = None,
size: Dict[str, int] = None,
size_divisor: int = None,
resample: PILImageResampling = None,
do_rescale: bool = None,
rescale_factor: float = None,
do_normalize: bool = None,
image_mean: Optional[Union[float, List[float]]] = None,
image_std: Optional[Union[float, List[float]]] = None,
):
if do_resize:
image = self.resize(image, size=size, size_divisor=size_divisor, resample=resample)
if do_rescale:
image = self.rescale(image, rescale_factor=rescale_factor)
if do_normalize:
image = self.normalize(image, mean=image_mean, std=image_std)
return image
def _preprocess_image(
self,
image: ImageInput,
do_resize: bool = None,
size: Dict[str, int] = None,
size_divisor: int = None,
resample: PILImageResampling = None,
do_rescale: bool = None,
rescale_factor: float = None,
do_normalize: bool = None,
image_mean: Optional[Union[float, List[float]]] = None,
image_std: Optional[Union[float, List[float]]] = None,
data_format: Optional[Union[str, ChannelDimension]] = None,
) -> np.ndarray:
"""Preprocesses a single image."""
# All transformations expect numpy arrays.
image = to_numpy_array(image)
image = self._preprocess(
image=image,
do_resize=do_resize,
size=size,
size_divisor=size_divisor,
resample=resample,
do_rescale=do_rescale,
rescale_factor=rescale_factor,
do_normalize=do_normalize,
image_mean=image_mean,
image_std=image_std,
)
if data_format is not None:
image = to_channel_dimension_format(image, data_format)
return image
def _preprocess_mask(
self,
segmentation_map: ImageInput,
do_resize: bool = None,
size: Dict[str, int] = None,
size_divisor: int = 0,
) -> np.ndarray:
"""Preprocesses a single mask."""
segmentation_map = to_numpy_array(segmentation_map)
# Add channel dimension if missing - needed for certain transformations
added_channel_dim = False
if segmentation_map.ndim == 2:
added_channel_dim = True
segmentation_map = segmentation_map[None, ...]
# TODO: (Amy)
# Remork segmentation map processing to include reducing labels and resizing which doesn't
# drop segment IDs > 255.
segmentation_map = self._preprocess(
image=segmentation_map,
do_resize=do_resize,
resample=PILImageResampling.NEAREST,
size=size,
size_divisor=size_divisor,
do_rescale=False,
do_normalize=False,
)
# Remove extra channel dimension if added for processing
if added_channel_dim:
segmentation_map = segmentation_map.squeeze(0)
return segmentation_map
def preprocess(
self,
images: ImageInput,
segmentation_maps: Optional[ImageInput] = None,
instance_id_to_semantic_id: Optional[Dict[int, int]] = None,
do_resize: Optional[bool] = None,
size: Optional[Dict[str, int]] = None,
size_divisor: Optional[int] = None,
resample: PILImageResampling = None,
do_rescale: Optional[bool] = None,
rescale_factor: Optional[float] = None,
do_normalize: Optional[bool] = None,
image_mean: Optional[Union[float, List[float]]] = None,
image_std: Optional[Union[float, List[float]]] = None,
ignore_index: Optional[int] = None,
reduce_labels: Optional[bool] = None,
return_tensors: Optional[Union[str, TensorType]] = None,
data_format: Union[str, ChannelDimension] = ChannelDimension.FIRST,
**kwargs,
) -> BatchFeature:
if "pad_and_return_pixel_mask" in kwargs:
warnings.warn(
"The `pad_and_return_pixel_mask` argument is deprecated and will be removed in a future version",
FutureWarning,
)
do_resize = do_resize if do_resize is not None else self.do_resize
size = size if size is not None else self.size
size = get_size_dict(size, default_to_square=False, max_size=self._max_size)
size_divisor = size_divisor if size_divisor is not None else self.size_divisor
resample = resample if resample is not None else self.resample
do_rescale = do_rescale if do_rescale is not None else self.do_rescale
rescale_factor = rescale_factor if rescale_factor is not None else self.rescale_factor
do_normalize = do_normalize if do_normalize is not None else self.do_normalize
image_mean = image_mean if image_mean is not None else self.image_mean
image_std = image_std if image_std is not None else self.image_std
ignore_index = ignore_index if ignore_index is not None else self.ignore_index
reduce_labels = reduce_labels if reduce_labels is not None else self.reduce_labels
if do_resize is not None and size is None or size_divisor is None:
raise ValueError("If `do_resize` is True, `size` and `size_divisor` must be provided.")
if do_rescale is not None and rescale_factor is None:
raise ValueError("If `do_rescale` is True, `rescale_factor` must be provided.")
if do_normalize is not None and (image_mean is None or image_std is None):
raise ValueError("If `do_normalize` is True, `image_mean` and `image_std` must be provided.")
if not valid_images(images):
raise ValueError(
"Invalid image type. Must be of type PIL.Image.Image, numpy.ndarray, "
"torch.Tensor, tf.Tensor or jax.ndarray."
)
if segmentation_maps is not None and not valid_images(segmentation_maps):
raise ValueError(
"Invalid segmentation map type. Must be of type PIL.Image.Image, numpy.ndarray, "
"torch.Tensor, tf.Tensor or jax.ndarray."
)
if not is_batched(images):
images = [images]
segmentation_maps = [segmentation_maps] if segmentation_maps is not None else None
if segmentation_maps is not None and len(images) != len(segmentation_maps):
raise ValueError("Images and segmentation maps must have the same length.")
images = [
self._preprocess_image(
image,
do_resize=do_resize,
size=size,
size_divisor=size_divisor,
resample=resample,
do_rescale=do_rescale,
rescale_factor=rescale_factor,
do_normalize=do_normalize,
image_mean=image_mean,
image_std=image_std,
data_format=data_format,
)
for image in images
]
if segmentation_maps is not None:
segmentation_maps = [
self._preprocess_mask(segmentation_map, do_resize, size, size_divisor)
for segmentation_map in segmentation_maps
]
encoded_inputs = self.encode_inputs(
images, segmentation_maps, instance_id_to_semantic_id, ignore_index, reduce_labels, return_tensors
)
return encoded_inputs
# Copied from transformers.models.detr.image_processing_detr.DetrImageProcessor._pad_image
def _pad_image(
self,
image: np.ndarray,
output_size: Tuple[int, int],
constant_values: Union[float, Iterable[float]] = 0,
data_format: Optional[ChannelDimension] = None,
) -> np.ndarray:
"""
Pad an image with zeros to the given size.
"""
input_height, input_width = get_image_size(image)
output_height, output_width = output_size
pad_bottom = output_height - input_height
pad_right = output_width - input_width
padding = ((0, pad_bottom), (0, pad_right))
padded_image = pad(
image, padding, mode=PaddingMode.CONSTANT, constant_values=constant_values, data_format=data_format
)
return padded_image
# Copied from transformers.models.detr.image_processing_detr.DetrImageProcessor.pad
def pad(
self,
images: List[np.ndarray],
constant_values: Union[float, Iterable[float]] = 0,
return_pixel_mask: bool = True,
return_tensors: Optional[Union[str, TensorType]] = None,
data_format: Optional[ChannelDimension] = None,
) -> np.ndarray:
"""
Pads a batch of images to the bottom and right of the image with zeros to the size of largest height and width
in the batch and optionally returns their corresponding pixel mask.
Args:
image (`np.ndarray`):
Image to pad.
constant_values (`float` or `Iterable[float]`, *optional*):
The value to use for the padding if `mode` is `"constant"`.
return_pixel_mask (`bool`, *optional*, defaults to `True`):
Whether to return a pixel mask.
input_channel_dimension (`ChannelDimension`, *optional*):
The channel dimension format of the image. If not provided, it will be inferred from the input image.
data_format (`str` or `ChannelDimension`, *optional*):
The channel dimension format of the image. If not provided, it will be the same as the input image.
"""
pad_size = get_max_height_width(images)
padded_images = [
self._pad_image(image, pad_size, constant_values=constant_values, data_format=data_format)
for image in images
]
data = {"pixel_values": padded_images}
if return_pixel_mask:
masks = [make_pixel_mask(image=image, output_size=pad_size) for image in images]
data["pixel_mask"] = masks
return BatchFeature(data=data, tensor_type=return_tensors)
def encode_inputs(
self,
pixel_values_list: List[ImageInput],
segmentation_maps: ImageInput = None,
instance_id_to_semantic_id: Optional[Union[List[Dict[int, int]], Dict[int, int]]] = None,
ignore_index: Optional[int] = None,
reduce_labels: bool = False,
return_tensors: Optional[Union[str, TensorType]] = None,
):
"""
Pad images up to the largest image in a batch and create a corresponding `pixel_mask`.
Mask2Former addresses semantic segmentation with a mask classification paradigm, thus input segmentation maps
will be converted to lists of binary masks and their respective labels. Let's see an example, assuming
`segmentation_maps = [[2,6,7,9]]`, the output will contain `mask_labels =
[[1,0,0,0],[0,1,0,0],[0,0,1,0],[0,0,0,1]]` (four binary masks) and `class_labels = [2,6,7,9]`, the labels for
each mask.
Args:
pixel_values_list (`List[ImageInput]`):
List of images (pixel values) to be padded. Each image should be a tensor of shape `(channels, height,
width)`.
segmentation_maps (`ImageInput`, *optional*):
The corresponding semantic segmentation maps with the pixel-wise annotations.
(`bool`, *optional*, defaults to `True`):
Whether or not to pad images up to the largest image in a batch and create a pixel mask.
If left to the default, will return a pixel mask that is:
- 1 for pixels that are real (i.e. **not masked**),
- 0 for pixels that are padding (i.e. **masked**).
instance_id_to_semantic_id (`List[Dict[int, int]]` or `Dict[int, int]`, *optional*):
A mapping between object instance ids and class ids. If passed, `segmentation_maps` is treated as an
instance segmentation map where each pixel represents an instance id. Can be provided as a single
dictionary with a global/dataset-level mapping or as a list of dictionaries (one per image), to map
instance ids in each image separately.
return_tensors (`str` or [`~file_utils.TensorType`], *optional*):
If set, will return tensors instead of NumPy arrays. If set to `'pt'`, return PyTorch `torch.Tensor`
objects.
Returns:
[`BatchFeature`]: A [`BatchFeature`] with the following fields:
- **pixel_values** -- Pixel values to be fed to a model.
- **pixel_mask** -- Pixel mask to be fed to a model (when `=True` or if `pixel_mask` is in
`self.model_input_names`).
- **mask_labels** -- Optional list of mask labels of shape `(labels, height, width)` to be fed to a model
(when `annotations` are provided).
- **class_labels** -- Optional list of class labels of shape `(labels)` to be fed to a model (when
`annotations` are provided). They identify the labels of `mask_labels`, e.g. the label of
`mask_labels[i][j]` if `class_labels[i][j]`.
"""
ignore_index = self.ignore_index if ignore_index is None else ignore_index
reduce_labels = self.reduce_labels if reduce_labels is None else reduce_labels
pixel_values_list = [to_numpy_array(pixel_values) for pixel_values in pixel_values_list]
encoded_inputs = self.pad(pixel_values_list, return_tensors=return_tensors)
if segmentation_maps is not None:
mask_labels = []
class_labels = []
pad_size = get_max_height_width(pixel_values_list)
# Convert to list of binary masks and labels
for idx, segmentation_map in enumerate(segmentation_maps):
segmentation_map = to_numpy_array(segmentation_map)
if isinstance(instance_id_to_semantic_id, list):
instance_id = instance_id_to_semantic_id[idx]
else:
instance_id = instance_id_to_semantic_id
# Use instance2class_id mapping per image
masks, classes = self.convert_segmentation_map_to_binary_masks(
segmentation_map, instance_id, ignore_index=ignore_index, reduce_labels=reduce_labels
)
# We add an axis to make them compatible with the transformations library
# this will be removed in the future
masks = [mask[None, ...] for mask in masks]
masks = [
self._pad_image(image=mask, output_size=pad_size, constant_values=ignore_index) for mask in masks
]
masks = np.concatenate(masks, axis=0)
mask_labels.append(torch.from_numpy(masks))
class_labels.append(torch.from_numpy(classes))
# we cannot batch them since they don't share a common class size
encoded_inputs["mask_labels"] = mask_labels
encoded_inputs["class_labels"] = class_labels
return encoded_inputs
def post_process_semantic_segmentation(
self, outputs, target_sizes: Optional[List[Tuple[int, int]]] = None
) -> "torch.Tensor":
"""
Converts the output of [`Mask2FormerForUniversalSegmentation`] into semantic segmentation maps. Only supports
PyTorch.
Args:
outputs ([`Mask2FormerForUniversalSegmentation`]):
Raw outputs of the model.
target_sizes (`List[Tuple[int, int]]`, *optional*):
List of length (batch_size), where each list item (`Tuple[int, int]]`) corresponds to the requested
final size (height, width) of each prediction. If left to None, predictions will not be resized.
Returns:
`List[torch.Tensor]`:
A list of length `batch_size`, where each item is a semantic segmentation map of shape (height, width)
corresponding to the target_sizes entry (if `target_sizes` is specified). Each entry of each
`torch.Tensor` correspond to a semantic class id.
"""
class_queries_logits = outputs.class_queries_logits # [batch_size, num_queries, num_classes+1]
masks_queries_logits = outputs.masks_queries_logits # [batch_size, num_queries, height, width]
# Scale back to preprocessed image size - (384, 384) for all models
masks_queries_logits = torch.nn.functional.interpolate(
masks_queries_logits, size=(384, 384), mode="bilinear", align_corners=False
)
# Remove the null class `[..., :-1]`
masks_classes = class_queries_logits.softmax(dim=-1)[..., :-1]
masks_probs = masks_queries_logits.sigmoid() # [batch_size, num_queries, height, width]
# Semantic segmentation logits of shape (batch_size, num_classes, height, width)
segmentation = torch.einsum("bqc, bqhw -> bchw", masks_classes, masks_probs)
batch_size = class_queries_logits.shape[0]
# Resize logits and compute semantic segmentation maps
if target_sizes is not None:
if batch_size != len(target_sizes):
raise ValueError(
"Make sure that you pass in as many target sizes as the batch dimension of the logits"
)
semantic_segmentation = []
for idx in range(batch_size):
resized_logits = torch.nn.functional.interpolate(
segmentation[idx].unsqueeze(dim=0), size=target_sizes[idx], mode="bilinear", align_corners=False
)
semantic_map = resized_logits[0].argmax(dim=0)
semantic_segmentation.append(semantic_map)
else:
semantic_segmentation = segmentation.argmax(dim=1)
semantic_segmentation = [semantic_segmentation[i] for i in range(semantic_segmentation.shape[0])]
return semantic_segmentation
def post_process_instance_segmentation(
self,
outputs,
threshold: float = 0.5,
mask_threshold: float = 0.5,
overlap_mask_area_threshold: float = 0.8,
target_sizes: Optional[List[Tuple[int, int]]] = None,
return_coco_annotation: Optional[bool] = False,
return_binary_maps: Optional[bool] = False,
) -> List[Dict]:
"""
Converts the output of [`Mask2FormerForUniversalSegmentationOutput`] into instance segmentation predictions.
Only supports PyTorch.
Args:
outputs ([`Mask2FormerForUniversalSegmentation`]):
Raw outputs of the model.
threshold (`float`, *optional*, defaults to 0.5):
The probability score threshold to keep predicted instance masks.
mask_threshold (`float`, *optional*, defaults to 0.5):
Threshold to use when turning the predicted masks into binary values.
overlap_mask_area_threshold (`float`, *optional*, defaults to 0.8):
The overlap mask area threshold to merge or discard small disconnected parts within each binary
instance mask.
target_sizes (`List[Tuple]`, *optional*):
List of length (batch_size), where each list item (`Tuple[int, int]]`) corresponds to the requested
final size (height, width) of each prediction. If left to None, predictions will not be resized.
return_coco_annotation (`bool`, *optional*, defaults to `False`):
If set to `True`, segmentation maps are returned in COCO run-length encoding (RLE) format.
return_binary_maps (`bool`, *optional*, defaults to `False`):
If set to `True`, segmentation maps are returned as a concatenated tensor of binary segmentation maps
(one per detected instance).
Returns:
`List[Dict]`: A list of dictionaries, one per image, each dictionary containing two keys:
- **segmentation** -- A tensor of shape `(height, width)` where each pixel represents a `segment_id` or
`List[List]` run-length encoding (RLE) of the segmentation map if return_coco_annotation is set to
`True`. Set to `None` if no mask if found above `threshold`.
- **segments_info** -- A dictionary that contains additional information on each segment.
- **id** -- An integer representing the `segment_id`.
- **label_id** -- An integer representing the label / semantic class id corresponding to `segment_id`.
- **score** -- Prediction score of segment with `segment_id`.
"""
if return_coco_annotation and return_binary_maps:
raise ValueError("return_coco_annotation and return_binary_maps can not be both set to True.")
# [batch_size, num_queries, num_classes+1]
class_queries_logits = outputs.class_queries_logits
# [batch_size, num_queries, height, width]
masks_queries_logits = outputs.masks_queries_logits
# Scale back to preprocessed image size - (384, 384) for all models
masks_queries_logits = torch.nn.functional.interpolate(
masks_queries_logits, size=(384, 384), mode="bilinear", align_corners=False
)
device = masks_queries_logits.device
num_classes = class_queries_logits.shape[-1] - 1
num_queries = class_queries_logits.shape[-2]
# Loop over items in batch size
results: List[Dict[str, TensorType]] = []
for i in range(class_queries_logits.shape[0]):
mask_pred = masks_queries_logits[i]
mask_cls = class_queries_logits[i]
scores = torch.nn.functional.softmax(mask_cls, dim=-1)[:, :-1]
labels = torch.arange(num_classes, device=device).unsqueeze(0).repeat(num_queries, 1).flatten(0, 1)
scores_per_image, topk_indices = scores.flatten(0, 1).topk(num_queries, sorted=False)
labels_per_image = labels[topk_indices]
topk_indices = torch.div(topk_indices, num_classes, rounding_mode="floor")
mask_pred = mask_pred[topk_indices]
pred_masks = (mask_pred > 0).float()
# Calculate average mask prob
mask_scores_per_image = (mask_pred.sigmoid().flatten(1) * pred_masks.flatten(1)).sum(1) / (
pred_masks.flatten(1).sum(1) + 1e-6
)
pred_scores = scores_per_image * mask_scores_per_image
pred_classes = labels_per_image
segmentation = torch.zeros((384, 384)) - 1
if target_sizes is not None:
segmentation = torch.zeros(target_sizes[i]) - 1
pred_masks = torch.nn.functional.interpolate(
pred_masks.unsqueeze(0), size=target_sizes[i], mode="nearest"
)[0]
instance_maps, segments = [], []
current_segment_id = 0
for j in range(num_queries):
score = pred_scores[j].item()
if not torch.all(pred_masks[j] == 0) and score >= threshold:
segmentation[pred_masks[j] == 1] = current_segment_id
segments.append(
{
"id": current_segment_id,
"label_id": pred_classes[j].item(),
"was_fused": False,
"score": round(score, 6),
}
)
current_segment_id += 1
instance_maps.append(pred_masks[j])
# Return segmentation map in run-length encoding (RLE) format
if return_coco_annotation:
segmentation = convert_segmentation_to_rle(segmentation)
# Return a concatenated tensor of binary instance maps
if return_binary_maps and len(instance_maps) != 0:
segmentation = torch.stack(instance_maps, dim=0)
results.append({"segmentation": segmentation, "segments_info": segments})
return results
def post_process_panoptic_segmentation(
self,
outputs,
threshold: float = 0.5,
mask_threshold: float = 0.5,
overlap_mask_area_threshold: float = 0.8,
label_ids_to_fuse: Optional[Set[int]] = None,
target_sizes: Optional[List[Tuple[int, int]]] = None,
) -> List[Dict]:
"""
Converts the output of [`Mask2FormerForUniversalSegmentationOutput`] into image panoptic segmentation
predictions. Only supports PyTorch.
Args:
outputs ([`Mask2FormerForUniversalSegmentationOutput`]):
The outputs from [`Mask2FormerForUniversalSegmentation`].
threshold (`float`, *optional*, defaults to 0.5):
The probability score threshold to keep predicted instance masks.
mask_threshold (`float`, *optional*, defaults to 0.5):
Threshold to use when turning the predicted masks into binary values.
overlap_mask_area_threshold (`float`, *optional*, defaults to 0.8):
The overlap mask area threshold to merge or discard small disconnected parts within each binary
instance mask.
label_ids_to_fuse (`Set[int]`, *optional*):
The labels in this state will have all their instances be fused together. For instance we could say
there can only be one sky in an image, but several persons, so the label ID for sky would be in that
set, but not the one for person.
target_sizes (`List[Tuple]`, *optional*):
List of length (batch_size), where each list item (`Tuple[int, int]]`) corresponds to the requested
final size (height, width) of each prediction in batch. If left to None, predictions will not be
resized.
Returns:
`List[Dict]`: A list of dictionaries, one per image, each dictionary containing two keys:
- **segmentation** -- a tensor of shape `(height, width)` where each pixel represents a `segment_id`, set
to `None` if no mask if found above `threshold`. If `target_sizes` is specified, segmentation is resized
to the corresponding `target_sizes` entry.
- **segments_info** -- A dictionary that contains additional information on each segment.
- **id** -- an integer representing the `segment_id`.
- **label_id** -- An integer representing the label / semantic class id corresponding to `segment_id`.
- **was_fused** -- a boolean, `True` if `label_id` was in `label_ids_to_fuse`, `False` otherwise.
Multiple instances of the same class / label were fused and assigned a single `segment_id`.
- **score** -- Prediction score of segment with `segment_id`.
"""
if label_ids_to_fuse is None:
logger.warning("`label_ids_to_fuse` unset. No instance will be fused.")
label_ids_to_fuse = set()
class_queries_logits = outputs.class_queries_logits # [batch_size, num_queries, num_classes+1]
masks_queries_logits = outputs.masks_queries_logits # [batch_size, num_queries, height, width]
# Scale back to preprocessed image size - (384, 384) for all models
masks_queries_logits = torch.nn.functional.interpolate(
masks_queries_logits, size=(384, 384), mode="bilinear", align_corners=False
)
batch_size = class_queries_logits.shape[0]
num_labels = class_queries_logits.shape[-1] - 1
mask_probs = masks_queries_logits.sigmoid() # [batch_size, num_queries, height, width]
# Predicted label and score of each query (batch_size, num_queries)
pred_scores, pred_labels = nn.functional.softmax(class_queries_logits, dim=-1).max(-1)
# Loop over items in batch size
results: List[Dict[str, TensorType]] = []
for i in range(batch_size):
mask_probs_item, pred_scores_item, pred_labels_item = remove_low_and_no_objects(
mask_probs[i], pred_scores[i], pred_labels[i], threshold, num_labels
)
# No mask found
if mask_probs_item.shape[0] <= 0:
height, width = target_sizes[i] if target_sizes is not None else mask_probs_item.shape[1:]
segmentation = torch.zeros((height, width)) - 1
results.append({"segmentation": segmentation, "segments_info": []})
continue
# Get segmentation map and segment information of batch item
target_size = target_sizes[i] if target_sizes is not None else None
segmentation, segments = compute_segments(
mask_probs=mask_probs_item,
pred_scores=pred_scores_item,
pred_labels=pred_labels_item,
mask_threshold=mask_threshold,
overlap_mask_area_threshold=overlap_mask_area_threshold,
label_ids_to_fuse=label_ids_to_fuse,
target_size=target_size,
)
results.append({"segmentation": segmentation, "segments_info": segments})
return results
| 50,612 | 43.989333 | 119 | py |
transformers | transformers-main/src/transformers/models/bart/modeling_flax_bart.py | # coding=utf-8
# Copyright 2021 The Fairseq Authors and The Google Flax Team Authors And The HuggingFace Inc. team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
""" Flax Bart model."""
import math
import random
from functools import partial
from typing import Callable, Optional, Tuple
import flax.linen as nn
import jax
import jax.numpy as jnp
from flax.core.frozen_dict import FrozenDict, freeze, unfreeze
from flax.linen import combine_masks, make_causal_mask
from flax.linen.attention import dot_product_attention_weights
from flax.traverse_util import flatten_dict, unflatten_dict
from jax import lax
from jax.random import PRNGKey
from ...modeling_flax_outputs import (
FlaxBaseModelOutput,
FlaxBaseModelOutputWithPastAndCrossAttentions,
FlaxCausalLMOutputWithCrossAttentions,
FlaxSeq2SeqLMOutput,
FlaxSeq2SeqModelOutput,
FlaxSeq2SeqQuestionAnsweringModelOutput,
FlaxSeq2SeqSequenceClassifierOutput,
)
from ...modeling_flax_utils import (
ACT2FN,
FlaxPreTrainedModel,
append_call_sample_docstring,
append_replace_return_docstrings,
overwrite_call_docstring,
)
from ...utils import add_start_docstrings, add_start_docstrings_to_model_forward, logging, replace_return_docstrings
from .configuration_bart import BartConfig
logger = logging.get_logger(__name__)
_CHECKPOINT_FOR_DOC = "facebook/bart-base"
_CONFIG_FOR_DOC = "BartConfig"
BART_START_DOCSTRING = r"""
This model inherits from [`FlaxPreTrainedModel`]. Check the superclass documentation for the generic methods the
library implements for all its model (such as downloading or saving, resizing the input embeddings, pruning heads
etc.)
This model is also a Flax Linen
[flax.nn.Module](https://flax.readthedocs.io/en/latest/_autosummary/flax.nn.module.html) subclass. Use it as a
regular Flax Module and refer to the Flax documentation for all matter related to general usage and behavior.
Finally, this model supports inherent JAX features such as:
- [Just-In-Time (JIT) compilation](https://jax.readthedocs.io/en/latest/jax.html#just-in-time-compilation-jit)
- [Automatic Differentiation](https://jax.readthedocs.io/en/latest/jax.html#automatic-differentiation)
- [Vectorization](https://jax.readthedocs.io/en/latest/jax.html#vectorization-vmap)
- [Parallelization](https://jax.readthedocs.io/en/latest/jax.html#parallelization-pmap)
Parameters:
config ([`BartConfig`]): Model configuration class with all the parameters of the model.
Initializing with a config file does not load the weights associated with the model, only the
configuration. Check out the [`~FlaxPreTrainedModel.from_pretrained`] method to load the model weights.
dtype (`jax.numpy.dtype`, *optional*, defaults to `jax.numpy.float32`):
The data type of the computation. Can be one of `jax.numpy.float32`, `jax.numpy.float16` (on GPUs) and
`jax.numpy.bfloat16` (on TPUs).
This can be used to enable mixed-precision training or half-precision inference on GPUs or TPUs. If
specified all the computation will be performed with the given `dtype`.
**Note that this only specifies the dtype of the computation and does not influence the dtype of model
parameters.**
If you wish to change the dtype of the model parameters, see [`~FlaxPreTrainedModel.to_fp16`] and
[`~FlaxPreTrainedModel.to_bf16`].
"""
BART_INPUTS_DOCSTRING = r"""
Args:
input_ids (`jnp.ndarray` of shape `(batch_size, sequence_length)`):
Indices of input sequence tokens in the vocabulary. Padding will be ignored by default should you provide
it.
Indices can be obtained using [`AutoTokenizer`]. See [`PreTrainedTokenizer.encode`] and
[`PreTrainedTokenizer.__call__`] for details.
[What are input IDs?](../glossary#input-ids)
attention_mask (`jnp.ndarray` of shape `(batch_size, sequence_length)`, *optional*):
Mask to avoid performing attention on padding token indices. Mask values selected in `[0, 1]`:
- 1 for tokens that are **not masked**,
- 0 for tokens that are **masked**.
[What are attention masks?](../glossary#attention-mask)
decoder_input_ids (`jnp.ndarray` of shape `(batch_size, target_sequence_length)`, *optional*):
Indices of decoder input sequence tokens in the vocabulary.
Indices can be obtained using [`AutoTokenizer`]. See [`PreTrainedTokenizer.encode`] and
[`PreTrainedTokenizer.__call__`] for details.
[What are decoder input IDs?](../glossary#decoder-input-ids)
For translation and summarization training, `decoder_input_ids` should be provided. If no
`decoder_input_ids` is provided, the model will create this tensor by shifting the `input_ids` to the right
for denoising pre-training following the paper.
decoder_attention_mask (`jnp.ndarray` of shape `(batch_size, target_sequence_length)`, *optional*):
Default behavior: generate a tensor that ignores pad tokens in `decoder_input_ids`. Causal mask will also
be used by default.
If you want to change padding behavior, you should modify to your needs. See diagram 1 in [the
paper](https://arxiv.org/abs/1910.13461) for more information on the default strategy.
position_ids (`numpy.ndarray` of shape `(batch_size, sequence_length)`, *optional*):
Indices of positions of each input sequence tokens in the position embeddings. Selected in the range `[0,
config.max_position_embeddings - 1]`.
decoder_position_ids (`numpy.ndarray` of shape `(batch_size, sequence_length)`, *optional*):
Indices of positions of each decoder input sequence tokens in the position embeddings. Selected in the
range `[0, config.max_position_embeddings - 1]`.
output_attentions (`bool`, *optional*):
Whether or not to return the attentions tensors of all attention layers. See `attentions` under returned
tensors for more detail.
output_hidden_states (`bool`, *optional*):
Whether or not to return the hidden states of all layers. See `hidden_states` under returned tensors for
more detail.
return_dict (`bool`, *optional*):
Whether or not to return a [`~utils.ModelOutput`] instead of a plain tuple.
"""
BART_ENCODE_INPUTS_DOCSTRING = r"""
Args:
input_ids (`jnp.ndarray` of shape `(batch_size, sequence_length)`):
Indices of input sequence tokens in the vocabulary. Padding will be ignored by default should you provide
it.
Indices can be obtained using [`AutoTokenizer`]. See [`PreTrainedTokenizer.encode`] and
[`PreTrainedTokenizer.__call__`] for details.
[What are input IDs?](../glossary#input-ids)
attention_mask (`jnp.ndarray` of shape `(batch_size, sequence_length)`, *optional*):
Mask to avoid performing attention on padding token indices. Mask values selected in `[0, 1]`:
- 1 for tokens that are **not masked**,
- 0 for tokens that are **masked**.
[What are attention masks?](../glossary#attention-mask)
position_ids (`numpy.ndarray` of shape `(batch_size, sequence_length)`, *optional*):
Indices of positions of each input sequence tokens in the position embeddings. Selected in the range `[0,
config.max_position_embeddings - 1]`.
output_attentions (`bool`, *optional*):
Whether or not to return the attentions tensors of all attention layers. See `attentions` under returned
tensors for more detail.
output_hidden_states (`bool`, *optional*):
Whether or not to return the hidden states of all layers. See `hidden_states` under returned tensors for
more detail.
return_dict (`bool`, *optional*):
Whether or not to return a [`~utils.ModelOutput`] instead of a plain tuple.
"""
BART_DECODE_INPUTS_DOCSTRING = r"""
Args:
decoder_input_ids (`jnp.ndarray` of shape `(batch_size, target_sequence_length)`):
Indices of decoder input sequence tokens in the vocabulary.
Indices can be obtained using [`AutoTokenizer`]. See [`PreTrainedTokenizer.encode`] and
[`PreTrainedTokenizer.__call__`] for details.
[What are decoder input IDs?](../glossary#decoder-input-ids)
For translation and summarization training, `decoder_input_ids` should be provided. If no
`decoder_input_ids` is provided, the model will create this tensor by shifting the `input_ids` to the right
for denoising pre-training following the paper.
encoder_outputs (`tuple(tuple(jnp.ndarray)`):
Tuple consists of (`last_hidden_state`, *optional*: `hidden_states`, *optional*: `attentions`)
`last_hidden_state` of shape `(batch_size, sequence_length, hidden_size)`, *optional*) is a sequence of
hidden-states at the output of the last layer of the encoder. Used in the cross-attention of the decoder.
encoder_attention_mask (`jnp.ndarray` of shape `(batch_size, sequence_length)`, *optional*):
Mask to avoid performing attention on padding token indices. Mask values selected in `[0, 1]`:
- 1 for tokens that are **not masked**,
- 0 for tokens that are **masked**.
[What are attention masks?](../glossary#attention-mask)
decoder_attention_mask (`jnp.ndarray` of shape `(batch_size, target_sequence_length)`, *optional*):
Default behavior: generate a tensor that ignores pad tokens in `decoder_input_ids`. Causal mask will also
be used by default.
If you want to change padding behavior, you should modify to your needs. See diagram 1 in [the
paper](https://arxiv.org/abs/1910.13461) for more information on the default strategy.
decoder_position_ids (`numpy.ndarray` of shape `(batch_size, sequence_length)`, *optional*):
Indices of positions of each decoder input sequence tokens in the position embeddings. Selected in the
range `[0, config.max_position_embeddings - 1]`.
past_key_values (`Dict[str, np.ndarray]`, *optional*, returned by `init_cache` or when passing previous `past_key_values`):
Dictionary of pre-computed hidden-states (key and values in the attention blocks) that can be used for fast
auto-regressive decoding. Pre-computed key and value hidden-states are of shape *[batch_size, max_length]*.
output_attentions (`bool`, *optional*):
Whether or not to return the attentions tensors of all attention layers. See `attentions` under returned
tensors for more detail.
output_hidden_states (`bool`, *optional*):
Whether or not to return the hidden states of all layers. See `hidden_states` under returned tensors for
more detail.
return_dict (`bool`, *optional*):
Whether or not to return a [`~utils.ModelOutput`] instead of a plain tuple.
"""
def shift_tokens_right(input_ids: jnp.array, pad_token_id: int, decoder_start_token_id: int) -> jnp.ndarray:
"""
Shift input ids one token to the right.
"""
shifted_input_ids = jnp.zeros_like(input_ids)
shifted_input_ids = shifted_input_ids.at[:, 1:].set(input_ids[:, :-1])
shifted_input_ids = shifted_input_ids.at[:, 0].set(decoder_start_token_id)
shifted_input_ids = jnp.where(shifted_input_ids == -100, pad_token_id, shifted_input_ids)
return shifted_input_ids
class FlaxBartAttention(nn.Module):
config: BartConfig
embed_dim: int
num_heads: int
dropout: float = 0.0
causal: bool = False
bias: bool = True
dtype: jnp.dtype = jnp.float32 # the dtype of the computation
def setup(self) -> None:
self.head_dim = self.embed_dim // self.num_heads
if self.head_dim * self.num_heads != self.embed_dim:
raise ValueError(
f"embed_dim must be divisible by num_heads (got `embed_dim`: {self.embed_dim}"
f" and `num_heads`: {self.num_heads})."
)
dense = partial(
nn.Dense,
self.embed_dim,
use_bias=self.bias,
dtype=self.dtype,
kernel_init=jax.nn.initializers.normal(self.config.init_std),
)
self.q_proj, self.k_proj, self.v_proj = dense(), dense(), dense()
self.out_proj = dense()
self.dropout_layer = nn.Dropout(rate=self.dropout)
if self.causal:
self.causal_mask = make_causal_mask(
jnp.ones((1, self.config.max_position_embeddings), dtype="bool"), dtype="bool"
)
def _split_heads(self, hidden_states):
return hidden_states.reshape(hidden_states.shape[:2] + (self.num_heads, self.head_dim))
def _merge_heads(self, hidden_states):
return hidden_states.reshape(hidden_states.shape[:2] + (self.embed_dim,))
@nn.compact
def _concatenate_to_cache(self, key, value, query, attention_mask):
"""
This function takes projected key, value states from a single input token and concatenates the states to cached
states from previous steps. This function is slighly adapted from the official Flax repository:
https://github.com/google/flax/blob/491ce18759622506588784b4fca0e4bf05f8c8cd/flax/linen/attention.py#L252
"""
# detect if we're initializing by absence of existing cache data.
is_initialized = self.has_variable("cache", "cached_key")
cached_key = self.variable("cache", "cached_key", jnp.zeros, key.shape, key.dtype)
cached_value = self.variable("cache", "cached_value", jnp.zeros, value.shape, value.dtype)
cache_index = self.variable("cache", "cache_index", lambda: jnp.array(0, dtype=jnp.int32))
if is_initialized:
*batch_dims, max_length, num_heads, depth_per_head = cached_key.value.shape
# update key, value caches with our new 1d spatial slices
cur_index = cache_index.value
indices = (0,) * len(batch_dims) + (cur_index, 0, 0)
key = lax.dynamic_update_slice(cached_key.value, key, indices)
value = lax.dynamic_update_slice(cached_value.value, value, indices)
cached_key.value = key
cached_value.value = value
num_updated_cache_vectors = query.shape[1]
cache_index.value = cache_index.value + num_updated_cache_vectors
# causal mask for cached decoder self-attention: our single query position should only attend to those key positions that have already been generated and cached, not the remaining zero elements.
pad_mask = jnp.broadcast_to(
jnp.arange(max_length) < cur_index + num_updated_cache_vectors,
tuple(batch_dims) + (1, num_updated_cache_vectors, max_length),
)
attention_mask = combine_masks(pad_mask, attention_mask)
return key, value, attention_mask
def __call__(
self,
hidden_states: jnp.ndarray,
key_value_states: Optional[jnp.ndarray] = None,
attention_mask: Optional[jnp.ndarray] = None,
init_cache: bool = False,
deterministic: bool = True,
) -> Tuple[jnp.ndarray]:
"""Input shape: Batch x Time x Channel"""
# if key_value_states are provided this layer is used as a cross-attention layer
# for the decoder
is_cross_attention = key_value_states is not None
batch_size = hidden_states.shape[0]
# get query proj
query_states = self.q_proj(hidden_states)
# get key, value proj
if is_cross_attention:
# cross_attentions
key_states = self.k_proj(key_value_states)
value_states = self.v_proj(key_value_states)
else:
# self_attention
key_states = self.k_proj(hidden_states)
value_states = self.v_proj(hidden_states)
query_states = self._split_heads(query_states)
key_states = self._split_heads(key_states)
value_states = self._split_heads(value_states)
# handle cache prepare causal attention mask
if self.causal:
query_length, key_length = query_states.shape[1], key_states.shape[1]
if self.has_variable("cache", "cached_key"):
mask_shift = self.variables["cache"]["cache_index"]
max_decoder_length = self.variables["cache"]["cached_key"].shape[1]
causal_mask = lax.dynamic_slice(
self.causal_mask, (0, 0, mask_shift, 0), (1, 1, query_length, max_decoder_length)
)
else:
causal_mask = self.causal_mask[:, :, :query_length, :key_length]
causal_mask = jnp.broadcast_to(causal_mask, (batch_size,) + causal_mask.shape[1:])
# combine masks if needed
if attention_mask is not None and self.causal:
attention_mask = jnp.broadcast_to(jnp.expand_dims(attention_mask, axis=(-3, -2)), causal_mask.shape)
attention_mask = combine_masks(attention_mask, causal_mask)
elif self.causal:
attention_mask = causal_mask
elif attention_mask is not None:
attention_mask = jnp.expand_dims(attention_mask, axis=(-3, -2))
# During fast autoregressive decoding, we feed one position at a time,
# and cache the keys and values step by step.
if self.causal and (self.has_variable("cache", "cached_key") or init_cache):
key_states, value_states, attention_mask = self._concatenate_to_cache(
key_states, value_states, query_states, attention_mask
)
# Convert the boolean attention mask to an attention bias.
if attention_mask is not None:
# attention mask in the form of attention bias
attention_bias = lax.select(
attention_mask > 0,
jnp.full(attention_mask.shape, 0.0).astype(self.dtype),
jnp.full(attention_mask.shape, jnp.finfo(self.dtype).min).astype(self.dtype),
)
else:
attention_bias = None
dropout_rng = None
if not deterministic and self.dropout > 0.0:
dropout_rng = self.make_rng("dropout")
attn_weights = dot_product_attention_weights(
query_states,
key_states,
bias=attention_bias,
dropout_rng=dropout_rng,
dropout_rate=self.dropout,
broadcast_dropout=True,
deterministic=deterministic,
dtype=self.dtype,
precision=None,
)
attn_output = jnp.einsum("...hqk,...khd->...qhd", attn_weights, value_states)
attn_output = self._merge_heads(attn_output)
attn_output = self.out_proj(attn_output)
return attn_output, attn_weights
class FlaxBartEncoderLayer(nn.Module):
config: BartConfig
dtype: jnp.dtype = jnp.float32
def setup(self) -> None:
self.embed_dim = self.config.d_model
self.self_attn = FlaxBartAttention(
config=self.config,
embed_dim=self.embed_dim,
num_heads=self.config.encoder_attention_heads,
dropout=self.config.attention_dropout,
dtype=self.dtype,
)
self.self_attn_layer_norm = nn.LayerNorm(dtype=self.dtype, epsilon=1e-05)
self.dropout_layer = nn.Dropout(rate=self.config.dropout)
self.activation_fn = ACT2FN[self.config.activation_function]
self.activation_dropout_layer = nn.Dropout(rate=self.config.activation_dropout)
self.fc1 = nn.Dense(
self.config.encoder_ffn_dim,
dtype=self.dtype,
kernel_init=jax.nn.initializers.normal(self.config.init_std),
)
self.fc2 = nn.Dense(
self.embed_dim, dtype=self.dtype, kernel_init=jax.nn.initializers.normal(self.config.init_std)
)
self.final_layer_norm = nn.LayerNorm(dtype=self.dtype, epsilon=1e-05)
def __call__(
self,
hidden_states: jnp.ndarray,
attention_mask: jnp.ndarray,
output_attentions: bool = True,
deterministic: bool = True,
) -> Tuple[jnp.ndarray]:
residual = hidden_states
hidden_states, attn_weights = self.self_attn(hidden_states=hidden_states, attention_mask=attention_mask)
hidden_states = self.dropout_layer(hidden_states, deterministic=deterministic)
hidden_states = residual + hidden_states
hidden_states = self.self_attn_layer_norm(hidden_states)
residual = hidden_states
hidden_states = self.activation_fn(self.fc1(hidden_states))
hidden_states = self.activation_dropout_layer(hidden_states, deterministic=deterministic)
hidden_states = self.fc2(hidden_states)
hidden_states = self.dropout_layer(hidden_states, deterministic=deterministic)
hidden_states = residual + hidden_states
hidden_states = self.final_layer_norm(hidden_states)
outputs = (hidden_states,)
if output_attentions:
outputs += (attn_weights,)
return outputs
class FlaxBartEncoderLayerCollection(nn.Module):
config: BartConfig
dtype: jnp.dtype = jnp.float32 # the dtype of the computation
def setup(self):
self.layers = [
FlaxBartEncoderLayer(self.config, name=str(i), dtype=self.dtype) for i in range(self.config.encoder_layers)
]
self.layerdrop = self.config.encoder_layerdrop
def __call__(
self,
hidden_states,
attention_mask,
deterministic: bool = True,
output_attentions: bool = False,
output_hidden_states: bool = False,
return_dict: bool = True,
):
all_attentions = () if output_attentions else None
all_hidden_states = () if output_hidden_states else None
for encoder_layer in self.layers:
if output_hidden_states:
all_hidden_states = all_hidden_states + (hidden_states,)
# add LayerDrop (see https://arxiv.org/abs/1909.11556 for description)
dropout_probability = random.uniform(0, 1)
if not deterministic and (dropout_probability < self.layerdrop): # skip the layer
layer_outputs = (None, None)
else:
layer_outputs = encoder_layer(
hidden_states,
attention_mask,
output_attentions,
deterministic,
)
hidden_states = layer_outputs[0]
if output_attentions:
all_attentions = all_attentions + (layer_outputs[1],)
if output_hidden_states:
all_hidden_states += (hidden_states,)
outputs = (hidden_states, all_hidden_states, all_attentions)
if not return_dict:
return tuple(v for v in outputs if v is not None)
return FlaxBaseModelOutput(
last_hidden_state=hidden_states, hidden_states=all_hidden_states, attentions=all_attentions
)
class FlaxBartDecoderLayer(nn.Module):
config: BartConfig
dtype: jnp.dtype = jnp.float32
def setup(self) -> None:
self.embed_dim = self.config.d_model
self.self_attn = FlaxBartAttention(
config=self.config,
embed_dim=self.embed_dim,
num_heads=self.config.decoder_attention_heads,
dropout=self.config.attention_dropout,
causal=True,
dtype=self.dtype,
)
self.dropout_layer = nn.Dropout(rate=self.config.dropout)
self.activation_fn = ACT2FN[self.config.activation_function]
self.activation_dropout_layer = nn.Dropout(rate=self.config.activation_dropout)
self.self_attn_layer_norm = nn.LayerNorm(dtype=self.dtype, epsilon=1e-05)
self.encoder_attn = FlaxBartAttention(
config=self.config,
embed_dim=self.embed_dim,
num_heads=self.config.decoder_attention_heads,
dropout=self.config.attention_dropout,
dtype=self.dtype,
)
self.encoder_attn_layer_norm = nn.LayerNorm(dtype=self.dtype, epsilon=1e-05)
self.fc1 = nn.Dense(
self.config.decoder_ffn_dim,
dtype=self.dtype,
kernel_init=jax.nn.initializers.normal(self.config.init_std),
)
self.fc2 = nn.Dense(
self.embed_dim, dtype=self.dtype, kernel_init=jax.nn.initializers.normal(self.config.init_std)
)
self.final_layer_norm = nn.LayerNorm(dtype=self.dtype, epsilon=1e-05)
def __call__(
self,
hidden_states: jnp.ndarray,
attention_mask: jnp.ndarray,
encoder_hidden_states: Optional[jnp.ndarray] = None,
encoder_attention_mask: Optional[jnp.ndarray] = None,
init_cache: bool = False,
output_attentions: bool = True,
deterministic: bool = True,
) -> Tuple[jnp.ndarray]:
residual = hidden_states
# Self Attention
hidden_states, self_attn_weights = self.self_attn(
hidden_states=hidden_states, attention_mask=attention_mask, init_cache=init_cache
)
hidden_states = self.dropout_layer(hidden_states, deterministic=deterministic)
hidden_states = residual + hidden_states
hidden_states = self.self_attn_layer_norm(hidden_states)
# Cross-Attention Block
cross_attn_weights = None
if encoder_hidden_states is not None:
residual = hidden_states
hidden_states, cross_attn_weights = self.encoder_attn(
hidden_states=hidden_states,
key_value_states=encoder_hidden_states,
attention_mask=encoder_attention_mask,
)
hidden_states = self.dropout_layer(hidden_states, deterministic=deterministic)
hidden_states = residual + hidden_states
hidden_states = self.encoder_attn_layer_norm(hidden_states)
# Fully Connected
residual = hidden_states
hidden_states = self.activation_fn(self.fc1(hidden_states))
hidden_states = self.activation_dropout_layer(hidden_states, deterministic=deterministic)
hidden_states = self.fc2(hidden_states)
hidden_states = self.dropout_layer(hidden_states, deterministic=deterministic)
hidden_states = residual + hidden_states
hidden_states = self.final_layer_norm(hidden_states)
outputs = (hidden_states,)
if output_attentions:
outputs += (self_attn_weights, cross_attn_weights)
return outputs
class FlaxBartDecoderLayerCollection(nn.Module):
config: BartConfig
dtype: jnp.dtype = jnp.float32 # the dtype of the computation
def setup(self):
self.layers = [
FlaxBartDecoderLayer(self.config, name=str(i), dtype=self.dtype) for i in range(self.config.decoder_layers)
]
self.layerdrop = self.config.decoder_layerdrop
def __call__(
self,
hidden_states,
attention_mask,
encoder_hidden_states: Optional[jnp.ndarray] = None,
encoder_attention_mask: Optional[jnp.ndarray] = None,
deterministic: bool = True,
init_cache: bool = False,
output_attentions: bool = False,
output_hidden_states: bool = False,
return_dict: bool = True,
):
# decoder layers
all_hidden_states = () if output_hidden_states else None
all_self_attns = () if output_attentions else None
all_cross_attentions = () if (output_attentions and encoder_hidden_states is not None) else None
for decoder_layer in self.layers:
if output_hidden_states:
all_hidden_states += (hidden_states,)
# add LayerDrop (see https://arxiv.org/abs/1909.11556 for description)
dropout_probability = random.uniform(0, 1)
if not deterministic and (dropout_probability < self.layerdrop):
layer_outputs = (None, None, None)
else:
layer_outputs = decoder_layer(
hidden_states,
attention_mask=attention_mask,
encoder_hidden_states=encoder_hidden_states,
encoder_attention_mask=encoder_attention_mask,
init_cache=init_cache,
output_attentions=output_attentions,
deterministic=deterministic,
)
hidden_states = layer_outputs[0]
if output_attentions:
all_self_attns += (layer_outputs[1],)
if encoder_hidden_states is not None:
all_cross_attentions += (layer_outputs[2],)
# add hidden states from the last decoder layer
if output_hidden_states:
all_hidden_states += (hidden_states,)
outputs = [hidden_states, all_hidden_states, all_self_attns, all_cross_attentions]
if not return_dict:
return tuple(v for v in outputs if v is not None)
return FlaxBaseModelOutputWithPastAndCrossAttentions(
last_hidden_state=hidden_states,
hidden_states=all_hidden_states,
attentions=all_self_attns,
cross_attentions=all_cross_attentions,
)
class FlaxBartClassificationHead(nn.Module):
"""Head for sentence-level classification tasks."""
config: BartConfig
inner_dim: int
num_classes: int
pooler_dropout: float
dtype: jnp.dtype = jnp.float32
def setup(self):
self.dense = nn.Dense(
self.inner_dim, dtype=self.dtype, kernel_init=jax.nn.initializers.normal(self.config.init_std)
)
self.dropout = nn.Dropout(rate=self.pooler_dropout)
self.out_proj = nn.Dense(
self.num_classes,
dtype=self.dtype,
kernel_init=jax.nn.initializers.normal(self.config.init_std),
)
def __call__(self, hidden_states: jnp.ndarray, deterministic: bool):
hidden_states = self.dropout(hidden_states, deterministic=deterministic)
hidden_states = self.dense(hidden_states)
hidden_states = jnp.tanh(hidden_states)
hidden_states = self.dropout(hidden_states, deterministic=deterministic)
hidden_states = self.out_proj(hidden_states)
return hidden_states
class FlaxBartEncoder(nn.Module):
config: BartConfig
embed_tokens: nn.Embed
dtype: jnp.dtype = jnp.float32 # the dtype of the computation
def setup(self):
self.dropout_layer = nn.Dropout(rate=self.config.dropout)
embed_dim = self.config.d_model
self.padding_idx = self.config.pad_token_id
self.max_source_positions = self.config.max_position_embeddings
self.embed_scale = math.sqrt(embed_dim) if self.config.scale_embedding else 1.0
# Bart is set up so that if padding_idx is specified then offset the embedding ids by 2
# and adjust num_embeddings appropriately. Other models don't have this hack
self.offset = 2
self.embed_positions = nn.Embed(
self.config.max_position_embeddings + self.offset,
embed_dim,
embedding_init=jax.nn.initializers.normal(self.config.init_std),
dtype=self.dtype,
)
self.layers = FlaxBartEncoderLayerCollection(self.config, self.dtype)
self.layernorm_embedding = nn.LayerNorm(dtype=self.dtype, epsilon=1e-05)
def __call__(
self,
input_ids,
attention_mask,
position_ids,
output_attentions: bool = False,
output_hidden_states: bool = False,
return_dict: bool = True,
deterministic: bool = True,
):
input_shape = input_ids.shape
input_ids = input_ids.reshape(-1, input_shape[-1])
inputs_embeds = self.embed_tokens(input_ids) * self.embed_scale
embed_pos = self.embed_positions(position_ids + self.offset)
hidden_states = inputs_embeds + embed_pos
hidden_states = self.layernorm_embedding(hidden_states)
hidden_states = self.dropout_layer(hidden_states, deterministic=deterministic)
outputs = self.layers(
hidden_states,
attention_mask,
deterministic=deterministic,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
if not return_dict:
return outputs
return FlaxBaseModelOutput(
last_hidden_state=outputs.last_hidden_state,
hidden_states=outputs.hidden_states,
attentions=outputs.attentions,
)
class FlaxBartDecoder(nn.Module):
config: BartConfig
embed_tokens: nn.Embed
dtype: jnp.dtype = jnp.float32 # the dtype of the computation
def setup(self):
self.dropout_layer = nn.Dropout(rate=self.config.dropout)
embed_dim = self.config.d_model
self.padding_idx = self.config.pad_token_id
self.max_target_positions = self.config.max_position_embeddings
self.embed_scale = math.sqrt(self.config.d_model) if self.config.scale_embedding else 1.0
# Bart is set up so that if padding_idx is specified then offset the embedding ids by 2
# and adjust num_embeddings appropriately. Other models don't have this hack
self.offset = 2
self.embed_positions = nn.Embed(
self.config.max_position_embeddings + self.offset,
embed_dim,
embedding_init=jax.nn.initializers.normal(self.config.init_std),
dtype=self.dtype,
)
self.layers = FlaxBartDecoderLayerCollection(self.config, self.dtype)
self.layernorm_embedding = nn.LayerNorm(dtype=self.dtype, epsilon=1e-05)
def __call__(
self,
input_ids,
attention_mask,
position_ids,
encoder_hidden_states: Optional[jnp.ndarray] = None,
encoder_attention_mask: Optional[jnp.ndarray] = None,
init_cache: bool = False,
output_attentions: bool = False,
output_hidden_states: bool = False,
return_dict: bool = True,
deterministic: bool = True,
):
input_shape = input_ids.shape
input_ids = input_ids.reshape(-1, input_shape[-1])
inputs_embeds = self.embed_tokens(input_ids) * self.embed_scale
# embed positions
positions = self.embed_positions(position_ids + self.offset)
hidden_states = inputs_embeds + positions
hidden_states = self.layernorm_embedding(hidden_states)
hidden_states = self.dropout_layer(hidden_states, deterministic=deterministic)
outputs = self.layers(
hidden_states,
attention_mask,
encoder_hidden_states,
encoder_attention_mask,
deterministic=deterministic,
init_cache=init_cache,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
if not return_dict:
return outputs
return FlaxBaseModelOutputWithPastAndCrossAttentions(
last_hidden_state=outputs.last_hidden_state,
hidden_states=outputs.hidden_states,
attentions=outputs.attentions,
cross_attentions=outputs.cross_attentions,
)
class FlaxBartModule(nn.Module):
config: BartConfig
dtype: jnp.dtype = jnp.float32 # the dtype of the computation
def setup(self):
self.shared = nn.Embed(
self.config.vocab_size,
self.config.d_model,
embedding_init=jax.nn.initializers.normal(self.config.init_std),
dtype=self.dtype,
)
self.encoder = FlaxBartEncoder(self.config, dtype=self.dtype, embed_tokens=self.shared)
self.decoder = FlaxBartDecoder(self.config, dtype=self.dtype, embed_tokens=self.shared)
def _get_encoder_module(self):
return self.encoder
def _get_decoder_module(self):
return self.decoder
def __call__(
self,
input_ids,
attention_mask,
decoder_input_ids,
decoder_attention_mask,
position_ids,
decoder_position_ids,
output_attentions: bool = False,
output_hidden_states: bool = False,
return_dict: bool = True,
deterministic: bool = True,
):
encoder_outputs = self.encoder(
input_ids=input_ids,
attention_mask=attention_mask,
position_ids=position_ids,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
deterministic=deterministic,
)
decoder_outputs = self.decoder(
input_ids=decoder_input_ids,
attention_mask=decoder_attention_mask,
position_ids=decoder_position_ids,
encoder_hidden_states=encoder_outputs[0],
encoder_attention_mask=attention_mask,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
deterministic=deterministic,
)
if not return_dict:
return decoder_outputs + encoder_outputs
return FlaxSeq2SeqModelOutput(
last_hidden_state=decoder_outputs.last_hidden_state,
decoder_hidden_states=decoder_outputs.hidden_states,
decoder_attentions=decoder_outputs.attentions,
cross_attentions=decoder_outputs.cross_attentions,
encoder_last_hidden_state=encoder_outputs.last_hidden_state,
encoder_hidden_states=encoder_outputs.hidden_states,
encoder_attentions=encoder_outputs.attentions,
)
class FlaxBartPreTrainedModel(FlaxPreTrainedModel):
config_class = BartConfig
base_model_prefix: str = "model"
module_class: nn.Module = None
def __init__(
self,
config: BartConfig,
input_shape: Tuple[int] = (1, 1),
seed: int = 0,
dtype: jnp.dtype = jnp.float32,
_do_init: bool = True,
**kwargs,
):
module = self.module_class(config=config, dtype=dtype, **kwargs)
super().__init__(config, module, input_shape=input_shape, seed=seed, dtype=dtype, _do_init=_do_init)
def init_weights(self, rng: jax.random.PRNGKey, input_shape: Tuple, params: FrozenDict = None) -> FrozenDict:
# init input tensors
input_ids = jnp.zeros(input_shape, dtype="i4")
# make sure initialization pass will work for FlaxBartForSequenceClassificationModule
input_ids = input_ids.at[(..., -1)].set(self.config.eos_token_id)
attention_mask = jnp.ones_like(input_ids)
decoder_input_ids = input_ids
decoder_attention_mask = jnp.ones_like(input_ids)
batch_size, sequence_length = input_ids.shape
position_ids = jnp.broadcast_to(jnp.arange(sequence_length)[None, :], (batch_size, sequence_length))
decoder_position_ids = jnp.broadcast_to(jnp.arange(sequence_length)[None, :], (batch_size, sequence_length))
params_rng, dropout_rng = jax.random.split(rng)
rngs = {"params": params_rng, "dropout": dropout_rng}
random_params = self.module.init(
rngs,
input_ids,
attention_mask,
decoder_input_ids,
decoder_attention_mask,
position_ids,
decoder_position_ids,
)["params"]
if params is not None:
random_params = flatten_dict(unfreeze(random_params))
params = flatten_dict(unfreeze(params))
for missing_key in self._missing_keys:
params[missing_key] = random_params[missing_key]
self._missing_keys = set()
return freeze(unflatten_dict(params))
else:
return random_params
def init_cache(self, batch_size, max_length, encoder_outputs):
r"""
Args:
batch_size (`int`):
batch_size used for fast auto-regressive decoding. Defines the batch size of the initialized cache.
max_length (`int`):
maximum possible length for auto-regressive decoding. Defines the sequence length of the initialized
cache.
encoder_outputs (`Union[FlaxBaseModelOutput, tuple(tuple(jnp.ndarray)]`):
`encoder_outputs` consists of (`last_hidden_state`, *optional*: `hidden_states`, *optional*:
`attentions`). `last_hidden_state` of shape `(batch_size, sequence_length, hidden_size)`, *optional*)
is a sequence of hidden-states at the output of the last layer of the encoder. Used in the
cross-attention of the decoder.
"""
# init input variables to retrieve cache
decoder_input_ids = jnp.ones((batch_size, max_length), dtype="i4")
decoder_attention_mask = jnp.ones_like(decoder_input_ids)
decoder_position_ids = jnp.broadcast_to(
jnp.arange(jnp.atleast_2d(decoder_input_ids).shape[-1]), decoder_input_ids.shape
)
def _decoder_forward(module, decoder_input_ids, decoder_attention_mask, decoder_position_ids, **kwargs):
decoder_module = module._get_decoder_module()
return decoder_module(
decoder_input_ids,
decoder_attention_mask,
decoder_position_ids,
**kwargs,
)
init_variables = self.module.init(
jax.random.PRNGKey(0),
decoder_input_ids=decoder_input_ids,
decoder_attention_mask=decoder_attention_mask,
decoder_position_ids=decoder_position_ids,
encoder_hidden_states=encoder_outputs[0],
init_cache=True,
method=_decoder_forward, # we only need to call the decoder to init the cache
)
return unfreeze(init_variables["cache"])
@add_start_docstrings(BART_ENCODE_INPUTS_DOCSTRING)
@replace_return_docstrings(output_type=FlaxBaseModelOutput, config_class=BartConfig)
def encode(
self,
input_ids: jnp.ndarray,
attention_mask: Optional[jnp.ndarray] = None,
position_ids: Optional[jnp.ndarray] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
train: bool = False,
params: dict = None,
dropout_rng: PRNGKey = None,
):
r"""
Returns:
Example:
```python
>>> from transformers import AutoTokenizer, FlaxBartForConditionalGeneration
>>> model = FlaxBartForConditionalGeneration.from_pretrained("facebook/bart-large-cnn")
>>> tokenizer = AutoTokenizer.from_pretrained("facebook/bart-large-cnn")
>>> text = "My friends are cool but they eat too many carbs."
>>> inputs = tokenizer(text, max_length=1024, return_tensors="jax")
>>> encoder_outputs = model.encode(**inputs)
```"""
output_attentions = output_attentions if output_attentions is not None else self.config.output_attentions
output_hidden_states = (
output_hidden_states if output_hidden_states is not None else self.config.output_hidden_states
)
return_dict = return_dict if return_dict is not None else self.config.return_dict
if attention_mask is None:
attention_mask = jnp.ones_like(input_ids)
if position_ids is None:
batch_size, sequence_length = input_ids.shape
position_ids = jnp.broadcast_to(jnp.arange(sequence_length)[None, :], (batch_size, sequence_length))
# Handle any PRNG if needed
rngs = {}
if dropout_rng is not None:
rngs["dropout"] = dropout_rng
def _encoder_forward(module, input_ids, attention_mask, position_ids, **kwargs):
encode_module = module._get_encoder_module()
return encode_module(input_ids, attention_mask, position_ids, **kwargs)
return self.module.apply(
{"params": params or self.params},
input_ids=jnp.array(input_ids, dtype="i4"),
attention_mask=jnp.array(attention_mask, dtype="i4"),
position_ids=jnp.array(position_ids, dtype="i4"),
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
deterministic=not train,
rngs=rngs,
method=_encoder_forward,
)
@add_start_docstrings(BART_DECODE_INPUTS_DOCSTRING)
@replace_return_docstrings(output_type=FlaxBaseModelOutputWithPastAndCrossAttentions, config_class=BartConfig)
def decode(
self,
decoder_input_ids,
encoder_outputs,
encoder_attention_mask: Optional[jnp.ndarray] = None,
decoder_attention_mask: Optional[jnp.ndarray] = None,
decoder_position_ids: Optional[jnp.ndarray] = None,
past_key_values: dict = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
train: bool = False,
params: dict = None,
dropout_rng: PRNGKey = None,
):
r"""
Returns:
Example:
```python
>>> import jax.numpy as jnp
>>> from transformers import AutoTokenizer, FlaxBartForConditionalGeneration
>>> model = FlaxBartForConditionalGeneration.from_pretrained("facebook/bart-large-cnn")
>>> tokenizer = AutoTokenizer.from_pretrained("facebook/bart-large-cnn")
>>> text = "My friends are cool but they eat too many carbs."
>>> inputs = tokenizer(text, max_length=1024, return_tensors="jax")
>>> encoder_outputs = model.encode(**inputs)
>>> decoder_start_token_id = model.config.decoder_start_token_id
>>> decoder_input_ids = jnp.ones((inputs.input_ids.shape[0], 1), dtype="i4") * decoder_start_token_id
>>> outputs = model.decode(decoder_input_ids, encoder_outputs)
>>> last_decoder_hidden_states = outputs.last_hidden_state
```"""
output_attentions = output_attentions if output_attentions is not None else self.config.output_attentions
output_hidden_states = (
output_hidden_states if output_hidden_states is not None else self.config.output_hidden_states
)
return_dict = return_dict if return_dict is not None else self.config.return_dict
encoder_hidden_states = encoder_outputs[0]
if encoder_attention_mask is None:
batch_size, sequence_length = encoder_hidden_states.shape[:2]
encoder_attention_mask = jnp.ones((batch_size, sequence_length))
batch_size, sequence_length = decoder_input_ids.shape
if decoder_attention_mask is None:
decoder_attention_mask = jnp.ones((batch_size, sequence_length))
if decoder_position_ids is None:
if past_key_values is not None:
raise ValueError("Make sure to provide `decoder_position_ids` when passing `past_key_values`.")
decoder_position_ids = jnp.broadcast_to(
jnp.arange(sequence_length)[None, :], (batch_size, sequence_length)
)
# Handle any PRNG if needed
rngs = {}
if dropout_rng is not None:
rngs["dropout"] = dropout_rng
inputs = {"params": params or self.params}
# if past_key_values are passed then cache is already initialized a private flag init_cache has to be
# passed down to ensure cache is used. It has to be made sure that cache is marked as mutable so that
# it can be changed by FlaxBartAttention module
if past_key_values:
inputs["cache"] = past_key_values
mutable = ["cache"]
else:
mutable = False
def _decoder_forward(module, decoder_input_ids, decoder_attention_mask, decoder_position_ids, **kwargs):
decoder_module = module._get_decoder_module()
return decoder_module(
decoder_input_ids,
decoder_attention_mask,
decoder_position_ids,
**kwargs,
)
outputs = self.module.apply(
inputs,
decoder_input_ids=jnp.array(decoder_input_ids, dtype="i4"),
decoder_attention_mask=jnp.array(decoder_attention_mask, dtype="i4"),
decoder_position_ids=jnp.array(decoder_position_ids, dtype="i4"),
encoder_hidden_states=encoder_hidden_states,
encoder_attention_mask=jnp.array(encoder_attention_mask, dtype="i4"),
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
deterministic=not train,
rngs=rngs,
mutable=mutable,
method=_decoder_forward,
)
# add updated cache to model output
if past_key_values is not None and return_dict:
outputs, past = outputs
outputs["past_key_values"] = unfreeze(past["cache"])
return outputs
elif past_key_values is not None and not return_dict:
outputs, past = outputs
outputs = outputs[:1] + (unfreeze(past["cache"]),) + outputs[1:]
return outputs
@add_start_docstrings_to_model_forward(BART_INPUTS_DOCSTRING)
def __call__(
self,
input_ids: jnp.ndarray,
attention_mask: Optional[jnp.ndarray] = None,
decoder_input_ids: Optional[jnp.ndarray] = None,
decoder_attention_mask: Optional[jnp.ndarray] = None,
position_ids: Optional[jnp.ndarray] = None,
decoder_position_ids: Optional[jnp.ndarray] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
train: bool = False,
params: dict = None,
dropout_rng: PRNGKey = None,
):
output_attentions = output_attentions if output_attentions is not None else self.config.output_attentions
output_hidden_states = (
output_hidden_states if output_hidden_states is not None else self.config.output_hidden_states
)
return_dict = return_dict if return_dict is not None else self.config.return_dict
# prepare encoder inputs
if attention_mask is None:
attention_mask = jnp.ones_like(input_ids)
if position_ids is None:
batch_size, sequence_length = input_ids.shape
position_ids = jnp.broadcast_to(jnp.arange(sequence_length)[None, :], (batch_size, sequence_length))
# prepare decoder inputs
if decoder_input_ids is None:
decoder_input_ids = shift_tokens_right(
input_ids, self.config.pad_token_id, decoder_start_token_id=self.config.decoder_start_token_id
)
if decoder_attention_mask is None:
decoder_attention_mask = jnp.ones_like(decoder_input_ids)
if decoder_position_ids is None:
batch_size, sequence_length = decoder_input_ids.shape
decoder_position_ids = jnp.broadcast_to(
jnp.arange(sequence_length)[None, :], (batch_size, sequence_length)
)
# Handle any PRNG if needed
rngs = {"dropout": dropout_rng} if dropout_rng is not None else {}
return self.module.apply(
{"params": params or self.params},
input_ids=jnp.array(input_ids, dtype="i4"),
attention_mask=jnp.array(attention_mask, dtype="i4"),
position_ids=jnp.array(position_ids, dtype="i4"),
decoder_input_ids=jnp.array(decoder_input_ids, dtype="i4"),
decoder_attention_mask=jnp.array(decoder_attention_mask, dtype="i4"),
decoder_position_ids=jnp.array(decoder_position_ids, dtype="i4"),
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
deterministic=not train,
rngs=rngs,
)
@add_start_docstrings(
"The bare Bart Model transformer outputting raw hidden-states without any specific head on top.",
BART_START_DOCSTRING,
)
class FlaxBartModel(FlaxBartPreTrainedModel):
config: BartConfig
dtype: jnp.dtype = jnp.float32 # the dtype of the computation
module_class = FlaxBartModule
append_call_sample_docstring(FlaxBartModel, _CHECKPOINT_FOR_DOC, FlaxSeq2SeqModelOutput, _CONFIG_FOR_DOC)
class FlaxBartForConditionalGenerationModule(nn.Module):
config: BartConfig
dtype: jnp.dtype = jnp.float32
bias_init: Callable[..., jnp.ndarray] = jax.nn.initializers.zeros
def setup(self):
self.model = FlaxBartModule(config=self.config, dtype=self.dtype)
self.lm_head = nn.Dense(
self.model.shared.num_embeddings,
use_bias=False,
dtype=self.dtype,
kernel_init=jax.nn.initializers.normal(self.config.init_std),
)
self.final_logits_bias = self.param("final_logits_bias", self.bias_init, (1, self.model.shared.num_embeddings))
def _get_encoder_module(self):
return self.model.encoder
def _get_decoder_module(self):
return self.model.decoder
def __call__(
self,
input_ids,
attention_mask,
decoder_input_ids,
decoder_attention_mask,
position_ids,
decoder_position_ids,
output_attentions: bool = False,
output_hidden_states: bool = False,
return_dict: bool = True,
deterministic: bool = True,
):
outputs = self.model(
input_ids=input_ids,
attention_mask=attention_mask,
decoder_input_ids=decoder_input_ids,
decoder_attention_mask=decoder_attention_mask,
position_ids=position_ids,
decoder_position_ids=decoder_position_ids,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
deterministic=deterministic,
)
hidden_states = outputs[0]
if self.config.tie_word_embeddings:
shared_embedding = self.model.variables["params"]["shared"]["embedding"]
lm_logits = self.lm_head.apply({"params": {"kernel": shared_embedding.T}}, hidden_states)
else:
lm_logits = self.lm_head(hidden_states)
lm_logits += jax.lax.stop_gradient(self.final_logits_bias.astype(self.dtype))
if not return_dict:
output = (lm_logits,) + outputs[1:]
return output
return FlaxSeq2SeqLMOutput(
logits=lm_logits,
decoder_hidden_states=outputs.decoder_hidden_states,
decoder_attentions=outputs.decoder_attentions,
cross_attentions=outputs.cross_attentions,
encoder_last_hidden_state=outputs.encoder_last_hidden_state,
encoder_hidden_states=outputs.encoder_hidden_states,
encoder_attentions=outputs.encoder_attentions,
)
@add_start_docstrings(
"The BART Model with a language modeling head. Can be used for summarization.", BART_START_DOCSTRING
)
class FlaxBartForConditionalGeneration(FlaxBartPreTrainedModel):
module_class = FlaxBartForConditionalGenerationModule
dtype: jnp.dtype = jnp.float32
@add_start_docstrings(BART_DECODE_INPUTS_DOCSTRING)
@replace_return_docstrings(output_type=FlaxCausalLMOutputWithCrossAttentions, config_class=BartConfig)
def decode(
self,
decoder_input_ids,
encoder_outputs,
encoder_attention_mask: Optional[jnp.ndarray] = None,
decoder_attention_mask: Optional[jnp.ndarray] = None,
decoder_position_ids: Optional[jnp.ndarray] = None,
past_key_values: dict = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
train: bool = False,
params: dict = None,
dropout_rng: PRNGKey = None,
):
r"""
Returns:
Example:
```python
>>> import jax.numpy as jnp
>>> from transformers import AutoTokenizer, FlaxBartForConditionalGeneration
>>> model = FlaxBartForConditionalGeneration.from_pretrained("facebook/bart-large-cnn")
>>> tokenizer = AutoTokenizer.from_pretrained("facebook/bart-large-cnn")
>>> text = "My friends are cool but they eat too many carbs."
>>> inputs = tokenizer(text, max_length=1024, return_tensors="jax")
>>> encoder_outputs = model.encode(**inputs)
>>> decoder_start_token_id = model.config.decoder_start_token_id
>>> decoder_input_ids = jnp.ones((inputs.input_ids.shape[0], 1), dtype="i4") * decoder_start_token_id
>>> outputs = model.decode(decoder_input_ids, encoder_outputs)
>>> logits = outputs.logits
```"""
output_attentions = output_attentions if output_attentions is not None else self.config.output_attentions
output_hidden_states = (
output_hidden_states if output_hidden_states is not None else self.config.output_hidden_states
)
return_dict = return_dict if return_dict is not None else self.config.return_dict
encoder_hidden_states = encoder_outputs[0]
if encoder_attention_mask is None:
batch_size, sequence_length = encoder_hidden_states.shape[:2]
encoder_attention_mask = jnp.ones((batch_size, sequence_length))
batch_size, sequence_length = decoder_input_ids.shape
if decoder_attention_mask is None:
decoder_attention_mask = jnp.ones((batch_size, sequence_length))
if decoder_position_ids is None:
if past_key_values is not None:
raise ValueError("Make sure to provide `decoder_position_ids` when passing `past_key_values`.")
decoder_position_ids = jnp.broadcast_to(
jnp.arange(sequence_length)[None, :], (batch_size, sequence_length)
)
# Handle any PRNG if needed
rngs = {}
if dropout_rng is not None:
rngs["dropout"] = dropout_rng
inputs = {"params": params or self.params}
# if past_key_values are passed then cache is already initialized a private flag init_cache has to be
# passed down to ensure cache is used. It has to be made sure that cache is marked as mutable so that
# it can be changed by FlaxBartAttention module
if past_key_values:
inputs["cache"] = past_key_values
mutable = ["cache"]
else:
mutable = False
def _decoder_forward(module, decoder_input_ids, decoder_attention_mask, decoder_position_ids, **kwargs):
decoder_module = module._get_decoder_module()
outputs = decoder_module(
decoder_input_ids,
decoder_attention_mask,
decoder_position_ids,
**kwargs,
)
hidden_states = outputs[0]
if self.config.tie_word_embeddings:
shared_embedding = module.model.variables["params"]["shared"]["embedding"]
lm_logits = module.lm_head.apply({"params": {"kernel": shared_embedding.T}}, hidden_states)
else:
lm_logits = module.lm_head(hidden_states)
lm_logits += module.final_logits_bias.astype(self.dtype)
return lm_logits, outputs
outputs = self.module.apply(
inputs,
decoder_input_ids=jnp.array(decoder_input_ids, dtype="i4"),
decoder_attention_mask=jnp.array(decoder_attention_mask, dtype="i4"),
decoder_position_ids=jnp.array(decoder_position_ids, dtype="i4"),
encoder_hidden_states=encoder_hidden_states,
encoder_attention_mask=jnp.array(encoder_attention_mask, dtype="i4"),
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
deterministic=not train,
rngs=rngs,
mutable=mutable,
method=_decoder_forward,
)
if past_key_values is None:
lm_logits, decoder_outputs = outputs
else:
(lm_logits, decoder_outputs), past = outputs
if return_dict:
outputs = FlaxCausalLMOutputWithCrossAttentions(
logits=lm_logits,
hidden_states=decoder_outputs.hidden_states,
attentions=decoder_outputs.attentions,
cross_attentions=decoder_outputs.cross_attentions,
)
else:
outputs = (lm_logits,) + decoder_outputs[1:]
# add updated cache to model output
if past_key_values is not None and return_dict:
outputs["past_key_values"] = unfreeze(past["cache"])
return outputs
elif past_key_values is not None and not return_dict:
outputs = outputs[:1] + (unfreeze(past["cache"]),) + outputs[1:]
return outputs
def prepare_inputs_for_generation(
self,
decoder_input_ids,
max_length,
attention_mask: Optional[jnp.DeviceArray] = None,
decoder_attention_mask: Optional[jnp.DeviceArray] = None,
encoder_outputs=None,
**kwargs,
):
# initializing the cache
batch_size, seq_length = decoder_input_ids.shape
past_key_values = self.init_cache(batch_size, max_length, encoder_outputs)
# Note that usually one would have to put 0's in the attention_mask for x > input_ids.shape[-1] and x < cache_length.
# But since the decoder uses a causal mask, those positions are masked anyways.
# Thus we can create a single static attention_mask here, which is more efficient for compilation
extended_attention_mask = jnp.ones((batch_size, max_length), dtype="i4")
if decoder_attention_mask is not None:
position_ids = decoder_attention_mask.cumsum(axis=-1) - 1
extended_attention_mask = lax.dynamic_update_slice(extended_attention_mask, decoder_attention_mask, (0, 0))
else:
position_ids = jnp.broadcast_to(jnp.arange(seq_length, dtype="i4")[None, :], (batch_size, seq_length))
return {
"past_key_values": past_key_values,
"encoder_outputs": encoder_outputs,
"encoder_attention_mask": attention_mask,
"decoder_attention_mask": extended_attention_mask,
"decoder_position_ids": position_ids,
}
def update_inputs_for_generation(self, model_outputs, model_kwargs):
model_kwargs["past_key_values"] = model_outputs.past_key_values
model_kwargs["decoder_position_ids"] = model_kwargs["decoder_position_ids"][:, -1:] + 1
return model_kwargs
FLAX_BART_CONDITIONAL_GENERATION_DOCSTRING = """
Returns:
Summarization example:
```python
>>> from transformers import AutoTokenizer, FlaxBartForConditionalGeneration
>>> model = FlaxBartForConditionalGeneration.from_pretrained("facebook/bart-large-cnn")
>>> tokenizer = AutoTokenizer.from_pretrained("facebook/bart-large-cnn")
>>> ARTICLE_TO_SUMMARIZE = "My friends are cool but they eat too many carbs."
>>> inputs = tokenizer([ARTICLE_TO_SUMMARIZE], max_length=1024, return_tensors="np")
>>> # Generate Summary
>>> summary_ids = model.generate(inputs["input_ids"]).sequences
>>> print(tokenizer.batch_decode(summary_ids, skip_special_tokens=True, clean_up_tokenization_spaces=False))
```
Mask filling example:
```python
>>> import jax
>>> from transformers import AutoTokenizer, FlaxBartForConditionalGeneration
>>> model = FlaxBartForConditionalGeneration.from_pretrained("facebook/bart-large")
>>> tokenizer = AutoTokenizer.from_pretrained("facebook/bart-large")
>>> TXT = "My friends are <mask> but they eat too many carbs."
>>> input_ids = tokenizer([TXT], return_tensors="jax")["input_ids"]
>>> logits = model(input_ids).logits
>>> masked_index = (input_ids[0] == tokenizer.mask_token_id).nonzero()[0].item()
>>> probs = jax.nn.softmax(logits[0, masked_index], axis=0)
>>> values, predictions = jax.lax.top_k(probs, k=1)
>>> tokenizer.decode(predictions).split()
```
"""
overwrite_call_docstring(
FlaxBartForConditionalGeneration, BART_INPUTS_DOCSTRING + FLAX_BART_CONDITIONAL_GENERATION_DOCSTRING
)
append_replace_return_docstrings(
FlaxBartForConditionalGeneration, output_type=FlaxSeq2SeqLMOutput, config_class=_CONFIG_FOR_DOC
)
class FlaxBartForSequenceClassificationModule(nn.Module):
config: BartConfig
dtype: jnp.dtype = jnp.float32
num_labels: Optional[int] = None
def setup(self):
self.model = FlaxBartModule(config=self.config, dtype=self.dtype)
self.classification_head = FlaxBartClassificationHead(
config=self.config,
inner_dim=self.config.d_model,
num_classes=self.num_labels if self.num_labels is not None else self.config.num_labels,
pooler_dropout=self.config.classifier_dropout,
)
def _get_encoder_module(self):
return self.model.encoder
def _get_decoder_module(self):
return self.model.decoder
def __call__(
self,
input_ids,
attention_mask,
decoder_input_ids,
decoder_attention_mask,
position_ids,
decoder_position_ids,
output_attentions: bool = False,
output_hidden_states: bool = False,
return_dict: bool = True,
deterministic: bool = True,
):
outputs = self.model(
input_ids=input_ids,
attention_mask=attention_mask,
decoder_input_ids=decoder_input_ids,
decoder_attention_mask=decoder_attention_mask,
position_ids=position_ids,
decoder_position_ids=decoder_position_ids,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
deterministic=deterministic,
)
hidden_states = outputs[0] # last hidden state
eos_mask = jnp.where(input_ids == self.config.eos_token_id, 1, 0)
# The first condition is necessary to overcome jax._src.errors.ConcretizationTypeError during JIT compilation
if type(eos_mask) != jax.interpreters.partial_eval.DynamicJaxprTracer:
if len(jnp.unique(eos_mask.sum(1))) > 1:
raise ValueError("All examples must have the same number of <eos> tokens.")
if any(eos_mask.sum(1) == 0):
raise ValueError("There are missing <eos> tokens in input_ids")
# Ensure to keep 1 only for the last <eos> token for each example
eos_mask_noised = eos_mask + jnp.arange(eos_mask.shape[1]) * 1e-6
eos_mask = jnp.where(eos_mask_noised == eos_mask_noised.max(1).reshape(-1, 1), 1, 0)
sentence_representation = jnp.einsum("ijk, ij -> ijk", hidden_states, eos_mask).sum(1)
logits = self.classification_head(sentence_representation, deterministic=deterministic)
if not return_dict:
output = (logits,) + outputs[1:]
return output
return FlaxSeq2SeqSequenceClassifierOutput(
logits=logits,
decoder_hidden_states=outputs.decoder_hidden_states,
decoder_attentions=outputs.decoder_attentions,
cross_attentions=outputs.cross_attentions,
encoder_last_hidden_state=outputs.encoder_last_hidden_state,
encoder_hidden_states=outputs.encoder_hidden_states,
encoder_attentions=outputs.encoder_attentions,
)
@add_start_docstrings(
"""
Bart model with a sequence classification/head on top (a linear layer on top of the pooled output) e.g. for GLUE
tasks.
""",
BART_START_DOCSTRING,
)
class FlaxBartForSequenceClassification(FlaxBartPreTrainedModel):
module_class = FlaxBartForSequenceClassificationModule
dtype = jnp.float32
append_call_sample_docstring(
FlaxBartForSequenceClassification,
_CHECKPOINT_FOR_DOC,
FlaxSeq2SeqSequenceClassifierOutput,
_CONFIG_FOR_DOC,
)
class FlaxBartForQuestionAnsweringModule(nn.Module):
config: BartConfig
dtype: jnp.dtype = jnp.float32
num_labels = 2
def setup(self):
self.model = FlaxBartModule(config=self.config, dtype=self.dtype)
self.qa_outputs = nn.Dense(
self.num_labels, dtype=self.dtype, kernel_init=jax.nn.initializers.normal(self.config.init_std)
)
def _get_encoder_module(self):
return self.model.encoder
def _get_decoder_module(self):
return self.model.decoder
def __call__(
self,
input_ids,
attention_mask,
decoder_input_ids,
decoder_attention_mask,
position_ids,
decoder_position_ids,
output_attentions: bool = False,
output_hidden_states: bool = False,
return_dict: bool = True,
deterministic: bool = True,
):
outputs = self.model(
input_ids=input_ids,
attention_mask=attention_mask,
decoder_input_ids=decoder_input_ids,
decoder_attention_mask=decoder_attention_mask,
position_ids=position_ids,
decoder_position_ids=decoder_position_ids,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
deterministic=deterministic,
)
sequence_output = outputs[0]
logits = self.qa_outputs(sequence_output)
start_logits, end_logits = jnp.split(logits, logits.shape[-1], axis=-1)
start_logits = start_logits.squeeze(-1)
end_logits = end_logits.squeeze(-1)
if not return_dict:
output = (start_logits, end_logits) + outputs[1:]
return output
return FlaxSeq2SeqQuestionAnsweringModelOutput(
start_logits=start_logits,
end_logits=end_logits,
decoder_hidden_states=outputs.decoder_hidden_states,
decoder_attentions=outputs.decoder_attentions,
cross_attentions=outputs.cross_attentions,
encoder_last_hidden_state=outputs.encoder_last_hidden_state,
encoder_hidden_states=outputs.encoder_hidden_states,
encoder_attentions=outputs.encoder_attentions,
)
@add_start_docstrings(
"""
BART Model with a span classification head on top for extractive question-answering tasks like SQuAD (a linear
layer on top of the hidden-states output to compute `span start logits` and `span end logits`).
""",
BART_START_DOCSTRING,
)
class FlaxBartForQuestionAnswering(FlaxBartPreTrainedModel):
module_class = FlaxBartForQuestionAnsweringModule
dtype = jnp.float32
append_call_sample_docstring(
FlaxBartForQuestionAnswering,
_CHECKPOINT_FOR_DOC,
FlaxSeq2SeqQuestionAnsweringModelOutput,
_CONFIG_FOR_DOC,
)
class FlaxBartDecoderPreTrainedModel(FlaxPreTrainedModel):
config_class = BartConfig
base_model_prefix: str = "model"
module_class: nn.Module = None
def __init__(
self,
config: BartConfig,
input_shape: Tuple[int] = (1, 1),
seed: int = 0,
dtype: jnp.dtype = jnp.float32,
_do_init: bool = True,
**kwargs,
):
config.is_decoder = True
config.is_encoder_decoder = False
module = self.module_class(config=config, dtype=dtype, **kwargs)
super().__init__(config, module, input_shape=input_shape, seed=seed, dtype=dtype, _do_init=_do_init)
def init_weights(self, rng: jax.random.PRNGKey, input_shape: Tuple, params: FrozenDict = None) -> FrozenDict:
# init input tensors
input_ids = jnp.zeros(input_shape, dtype="i4")
attention_mask = jnp.ones_like(input_ids)
batch_size, sequence_length = input_ids.shape
position_ids = jnp.broadcast_to(jnp.arange(sequence_length)[None, :], (batch_size, sequence_length))
params_rng, dropout_rng = jax.random.split(rng)
rngs = {"params": params_rng, "dropout": dropout_rng}
encoder_hidden_states = jnp.zeros(input_shape + (self.config.d_model,))
encoder_attention_mask = attention_mask
module_init_outputs = self.module.init(
rngs,
input_ids,
attention_mask,
position_ids,
encoder_hidden_states,
encoder_attention_mask,
return_dict=False,
)
return module_init_outputs["params"]
def init_cache(self, batch_size, max_length):
r"""
Args:
batch_size (`int`):
batch_size used for fast auto-regressive decoding. Defines the batch size of the initialized cache.
max_length (`int`):
maximum possible length for auto-regressive decoding. Defines the sequence length of the initialized
cache.
"""
# init input variables to retrieve cache
input_ids = jnp.ones((batch_size, max_length), dtype="i4")
attention_mask = jnp.ones_like(input_ids, dtype="i4")
position_ids = jnp.broadcast_to(jnp.arange(jnp.atleast_2d(input_ids).shape[-1]), input_ids.shape)
init_variables = self.module.init(
jax.random.PRNGKey(0), input_ids, attention_mask, position_ids, return_dict=False, init_cache=True
)
return unfreeze(init_variables["cache"])
@add_start_docstrings_to_model_forward(BART_DECODE_INPUTS_DOCSTRING)
def __call__(
self,
input_ids: jnp.ndarray,
attention_mask: Optional[jnp.ndarray] = None,
position_ids: Optional[jnp.ndarray] = None,
encoder_hidden_states: Optional[jnp.ndarray] = None,
encoder_attention_mask: Optional[jnp.ndarray] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
train: bool = False,
params: dict = None,
past_key_values: dict = None,
dropout_rng: PRNGKey = None,
):
output_attentions = output_attentions if output_attentions is not None else self.config.output_attentions
output_hidden_states = (
output_hidden_states if output_hidden_states is not None else self.config.output_hidden_states
)
return_dict = return_dict if return_dict is not None else self.config.return_dict
if encoder_hidden_states is not None and encoder_attention_mask is None:
batch_size, sequence_length = encoder_hidden_states.shape[:2]
encoder_attention_mask = jnp.ones((batch_size, sequence_length))
# prepare decoder inputs
if attention_mask is None:
attention_mask = jnp.ones_like(input_ids)
if position_ids is None:
batch_size, sequence_length = input_ids.shape
position_ids = jnp.broadcast_to(jnp.arange(sequence_length)[None, :], (batch_size, sequence_length))
# Handle any PRNG if needed
rngs = {"dropout": dropout_rng} if dropout_rng is not None else {}
inputs = {"params": params or self.params}
# if past_key_values are passed then cache is already initialized a private flag init_cache has to be passed
# down to ensure cache is used. It has to be made sure that cache is marked as mutable so that it can be
# changed by FlaxBartAttention module
if past_key_values:
inputs["cache"] = past_key_values
mutable = ["cache"]
else:
mutable = False
outputs = self.module.apply(
inputs,
input_ids=jnp.array(input_ids, dtype="i4"),
attention_mask=jnp.array(attention_mask, dtype="i4"),
position_ids=jnp.array(position_ids, dtype="i4"),
encoder_hidden_states=encoder_hidden_states,
encoder_attention_mask=encoder_attention_mask,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
deterministic=not train,
rngs=rngs,
mutable=mutable,
)
# add updated cache to model output
if past_key_values is not None and return_dict:
outputs, past_key_values = outputs
outputs["past_key_values"] = unfreeze(past_key_values["cache"])
return outputs
elif past_key_values is not None and not return_dict:
outputs, past_key_values = outputs
outputs = outputs[:1] + (unfreeze(past_key_values["cache"]),) + outputs[1:]
return outputs
class FlaxBartDecoderWrapper(nn.Module):
"""
This wrapper class is a helper class to correctly load pretrained checkpoints when the causal language model is
used in combination with the [`EncoderDecoderModel`] framework.
"""
config: BartConfig
dtype: jnp.dtype = jnp.float32
def setup(self):
embed_dim = self.config.d_model
embed_tokens = nn.Embed(
self.config.vocab_size,
embed_dim,
embedding_init=jax.nn.initializers.normal(self.config.init_std),
dtype=self.dtype,
)
self.decoder = FlaxBartDecoder(config=self.config, embed_tokens=embed_tokens, dtype=self.dtype)
def __call__(self, *args, **kwargs):
return self.decoder(*args, **kwargs)
class FlaxBartForCausalLMModule(nn.Module):
config: BartConfig
dtype: jnp.dtype = jnp.float32
def setup(self):
self.model = FlaxBartDecoderWrapper(config=self.config, dtype=self.dtype)
self.lm_head = nn.Dense(
self.config.vocab_size,
use_bias=False,
dtype=self.dtype,
kernel_init=jax.nn.initializers.normal(self.config.init_std),
)
def __call__(
self,
input_ids,
attention_mask,
position_ids,
encoder_hidden_states: Optional[jnp.ndarray] = None,
encoder_attention_mask: Optional[jnp.ndarray] = None,
init_cache: bool = False,
output_attentions: bool = False,
output_hidden_states: bool = False,
return_dict: bool = True,
deterministic: bool = True,
):
outputs = self.model(
input_ids,
attention_mask,
position_ids,
encoder_hidden_states,
encoder_attention_mask,
deterministic=deterministic,
init_cache=init_cache,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
hidden_states = outputs[0]
if self.config.tie_word_embeddings:
shared_embedding = self.model.variables["params"]["decoder"]["embed_tokens"]["embedding"]
lm_logits = self.lm_head.apply({"params": {"kernel": shared_embedding.T}}, hidden_states)
else:
lm_logits = self.lm_head(hidden_states)
if not return_dict:
return (lm_logits,) + outputs[1:]
return FlaxCausalLMOutputWithCrossAttentions(
logits=lm_logits,
hidden_states=outputs.hidden_states,
attentions=outputs.attentions,
cross_attentions=outputs.cross_attentions,
)
@add_start_docstrings(
"""
Bart Decoder Model with a language modeling head on top (linear layer with weights tied to the input embeddings)
e.g for autoregressive tasks.
""",
BART_START_DOCSTRING,
)
class FlaxBartForCausalLM(FlaxBartDecoderPreTrainedModel):
module_class = FlaxBartForCausalLMModule
def prepare_inputs_for_generation(self, input_ids, max_length, attention_mask: Optional[jnp.DeviceArray] = None):
# initializing the cache
batch_size, seq_length = input_ids.shape
past_key_values = self.init_cache(batch_size, max_length)
# Note that usually one would have to put 0's in the attention_mask for x > input_ids.shape[-1] and x < cache_length.
# But since the decoder uses a causal mask, those positions are masked anyway.
# Thus, we can create a single static attention_mask here, which is more efficient for compilation
extended_attention_mask = jnp.ones((batch_size, max_length), dtype="i4")
if attention_mask is not None:
position_ids = attention_mask.cumsum(axis=-1) - 1
extended_attention_mask = lax.dynamic_update_slice(extended_attention_mask, attention_mask, (0, 0))
else:
position_ids = jnp.broadcast_to(jnp.arange(seq_length, dtype="i4")[None, :], (batch_size, seq_length))
return {
"past_key_values": past_key_values,
"attention_mask": extended_attention_mask,
"position_ids": position_ids,
}
def update_inputs_for_generation(self, model_outputs, model_kwargs):
model_kwargs["past_key_values"] = model_outputs.past_key_values
model_kwargs["position_ids"] = model_kwargs["position_ids"][:, -1:] + 1
return model_kwargs
append_call_sample_docstring(
FlaxBartForCausalLM,
_CHECKPOINT_FOR_DOC,
FlaxCausalLMOutputWithCrossAttentions,
_CONFIG_FOR_DOC,
)
| 82,723 | 40.44489 | 206 | py |
transformers | transformers-main/src/transformers/models/bart/modeling_tf_bart.py | # coding=utf-8
# Copyright 2021 The Fairseq Authors and The HuggingFace Inc. team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
""" TF 2.0 Bart model."""
from __future__ import annotations
import random
from typing import Optional, Tuple, Union
import numpy as np
import tensorflow as tf
from ...activations_tf import get_tf_activation
from ...modeling_tf_outputs import (
TFBaseModelOutput,
TFBaseModelOutputWithPastAndCrossAttentions,
TFSeq2SeqLMOutput,
TFSeq2SeqModelOutput,
TFSeq2SeqSequenceClassifierOutput,
)
# Public API
from ...modeling_tf_utils import (
TFCausalLanguageModelingLoss,
TFModelInputType,
TFPreTrainedModel,
TFSequenceClassificationLoss,
keras_serializable,
unpack_inputs,
)
from ...tf_utils import check_embeddings_within_bounds, shape_list, stable_softmax
from ...utils import (
ContextManagers,
add_code_sample_docstrings,
add_end_docstrings,
add_start_docstrings,
add_start_docstrings_to_model_forward,
logging,
replace_return_docstrings,
)
from .configuration_bart import BartConfig
logger = logging.get_logger(__name__)
_CHECKPOINT_FOR_DOC = "facebook/bart-large"
_CONFIG_FOR_DOC = "BartConfig"
LARGE_NEGATIVE = -1e8
def shift_tokens_right(input_ids: tf.Tensor, pad_token_id: int, decoder_start_token_id: int):
pad_token_id = tf.cast(pad_token_id, input_ids.dtype)
decoder_start_token_id = tf.cast(decoder_start_token_id, input_ids.dtype)
start_tokens = tf.fill(
(shape_list(input_ids)[0], 1), tf.convert_to_tensor(decoder_start_token_id, input_ids.dtype)
)
shifted_input_ids = tf.concat([start_tokens, input_ids[:, :-1]], -1)
# replace possible -100 values in labels by `pad_token_id`
shifted_input_ids = tf.where(
shifted_input_ids == -100,
tf.fill(shape_list(shifted_input_ids), tf.convert_to_tensor(pad_token_id, input_ids.dtype)),
shifted_input_ids,
)
# "Verify that `labels` has only positive values and -100"
assert_gte0 = tf.debugging.assert_greater_equal(shifted_input_ids, tf.constant(0, dtype=input_ids.dtype))
# Make sure the assertion op is called by wrapping the result in an identity no-op
with tf.control_dependencies([assert_gte0]):
shifted_input_ids = tf.identity(shifted_input_ids)
return shifted_input_ids
def _make_causal_mask(input_ids_shape: tf.TensorShape, past_key_values_length: int = 0):
"""
Make causal mask used for bi-directional self-attention.
"""
bsz = input_ids_shape[0]
tgt_len = input_ids_shape[1]
mask = tf.ones((tgt_len, tgt_len)) * LARGE_NEGATIVE
mask_cond = tf.range(shape_list(mask)[-1])
mask = tf.where(mask_cond < tf.reshape(mask_cond + 1, (shape_list(mask)[-1], 1)), 0.0, mask)
if past_key_values_length > 0:
mask = tf.concat([tf.zeros((tgt_len, past_key_values_length)), mask], axis=-1)
return tf.tile(mask[None, None, :, :], (bsz, 1, 1, 1))
def _expand_mask(mask: tf.Tensor, tgt_len: Optional[int] = None):
"""
Expands attention_mask from `[bsz, seq_len]` to `[bsz, 1, tgt_seq_len, src_seq_len]`.
"""
src_len = shape_list(mask)[1]
tgt_len = tgt_len if tgt_len is not None else src_len
one_cst = tf.constant(1.0)
mask = tf.cast(mask, dtype=one_cst.dtype)
expanded_mask = tf.tile(mask[:, None, None, :], (1, 1, tgt_len, 1))
return (one_cst - expanded_mask) * LARGE_NEGATIVE
class TFBartLearnedPositionalEmbedding(tf.keras.layers.Embedding):
"""
This module learns positional embeddings up to a fixed maximum size.
"""
def __init__(self, num_embeddings: int, embedding_dim: int, **kwargs):
# Bart is set up so that if padding_idx is specified then offset the embedding ids by 2
# and adjust num_embeddings appropriately. Other models don't have this hack
self.offset = 2
super().__init__(num_embeddings + self.offset, embedding_dim, **kwargs)
def call(
self,
input_shape: Optional[tf.TensorShape] = None,
past_key_values_length: int = 0,
position_ids: tf.Tensor | None = None,
):
"""Input is expected to be of size [bsz x seqlen]."""
if position_ids is None:
seq_len = input_shape[1]
position_ids = tf.range(seq_len, delta=1, name="range")
position_ids += past_key_values_length
offset_dtype = position_ids.dtype if isinstance(position_ids, tf.Tensor) else tf.int32
return super().call(position_ids + tf.constant(self.offset, dtype=offset_dtype))
class TFBartAttention(tf.keras.layers.Layer):
"""Multi-headed attention from "Attention Is All You Need"""
def __init__(
self,
embed_dim: int,
num_heads: int,
dropout: float = 0.0,
is_decoder: bool = False,
bias: bool = True,
**kwargs,
):
super().__init__(**kwargs)
self.embed_dim = embed_dim
self.num_heads = num_heads
self.dropout = tf.keras.layers.Dropout(dropout)
self.head_dim = embed_dim // num_heads
if (self.head_dim * num_heads) != self.embed_dim:
raise ValueError(
f"embed_dim must be divisible by num_heads (got `embed_dim`: {self.embed_dim}"
f" and `num_heads`: {num_heads})."
)
self.scaling = self.head_dim**-0.5
self.is_decoder = is_decoder
self.k_proj = tf.keras.layers.Dense(embed_dim, use_bias=bias, name="k_proj")
self.q_proj = tf.keras.layers.Dense(embed_dim, use_bias=bias, name="q_proj")
self.v_proj = tf.keras.layers.Dense(embed_dim, use_bias=bias, name="v_proj")
self.out_proj = tf.keras.layers.Dense(embed_dim, use_bias=bias, name="out_proj")
def _shape(self, tensor: tf.Tensor, seq_len: int, bsz: int):
return tf.transpose(tf.reshape(tensor, (bsz, seq_len, self.num_heads, self.head_dim)), (0, 2, 1, 3))
def call(
self,
hidden_states: tf.Tensor,
key_value_states: tf.Tensor | None = None,
past_key_value: Tuple[Tuple[tf.Tensor]] | None = None,
attention_mask: tf.Tensor | None = None,
layer_head_mask: tf.Tensor | None = None,
training: Optional[bool] = False,
) -> Tuple[tf.Tensor, tf.Tensor | None]:
"""Input shape: Batch x Time x Channel"""
# if key_value_states are provided this layer is used as a cross-attention layer
# for the decoder
is_cross_attention = key_value_states is not None
bsz, tgt_len, embed_dim = shape_list(hidden_states)
# get query proj
query_states = self.q_proj(hidden_states) * self.scaling
# get key, value proj
if is_cross_attention and past_key_value is not None:
# reuse k,v, cross_attentions
key_states = past_key_value[0]
value_states = past_key_value[1]
elif is_cross_attention:
# cross_attentions
key_states = self._shape(self.k_proj(key_value_states), -1, bsz)
value_states = self._shape(self.v_proj(key_value_states), -1, bsz)
elif past_key_value is not None:
# reuse k, v, self_attention
key_states = self._shape(self.k_proj(hidden_states), -1, bsz)
value_states = self._shape(self.v_proj(hidden_states), -1, bsz)
key_states = tf.concat([past_key_value[0], key_states], axis=2)
value_states = tf.concat([past_key_value[1], value_states], axis=2)
else:
# self_attention
key_states = self._shape(self.k_proj(hidden_states), -1, bsz)
value_states = self._shape(self.v_proj(hidden_states), -1, bsz)
if self.is_decoder:
# if cross_attention save Tuple(tf.Tensor, tf.Tensor) of all cross attention key/value_states.
# Further calls to cross_attention layer can then reuse all cross-attention
# key/value_states (first "if" case)
# if uni-directional self-attention (decoder) save Tuple(tf.Tensor, tf.Tensor) of
# all previous decoder key/value_states. Further calls to uni-directional self-attention
# can concat previous decoder key/value_states to current projected key/value_states (third "elif" case)
# if encoder bi-directional self-attention `past_key_value` is always `None`
past_key_value = (key_states, value_states)
proj_shape = (bsz * self.num_heads, -1, self.head_dim)
query_states = tf.reshape(self._shape(query_states, tgt_len, bsz), proj_shape)
key_states = tf.reshape(key_states, proj_shape)
value_states = tf.reshape(value_states, proj_shape)
src_len = shape_list(key_states)[1]
attn_weights = tf.matmul(query_states, key_states, transpose_b=True)
tf.debugging.assert_equal(
shape_list(attn_weights),
[bsz * self.num_heads, tgt_len, src_len],
message=(
f"Attention weights should be of size {(bsz * self.num_heads, tgt_len, src_len)}, but is"
f" {shape_list(attn_weights)}"
),
)
if attention_mask is not None:
tf.debugging.assert_equal(
shape_list(attention_mask),
[bsz, 1, tgt_len, src_len],
message=(
f"Attention mask should be of size {(bsz, 1, tgt_len, src_len)}, but is"
f" {shape_list(attention_mask)}"
),
)
attention_mask = tf.cast(attention_mask, dtype=attn_weights.dtype)
attn_weights = tf.reshape(attn_weights, (bsz, self.num_heads, tgt_len, src_len)) + attention_mask
attn_weights = tf.reshape(attn_weights, (bsz * self.num_heads, tgt_len, src_len))
attn_weights = stable_softmax(attn_weights, axis=-1)
if layer_head_mask is not None:
tf.debugging.assert_equal(
shape_list(layer_head_mask),
[self.num_heads],
message=(
f"Head mask for a single layer should be of size {(self.num_heads)}, but is"
f" {shape_list(layer_head_mask)}"
),
)
attn_weights = tf.reshape(layer_head_mask, (1, -1, 1, 1)) * tf.reshape(
attn_weights, (bsz, self.num_heads, tgt_len, src_len)
)
attn_weights = tf.reshape(attn_weights, (bsz * self.num_heads, tgt_len, src_len))
attn_probs = self.dropout(attn_weights, training=training)
attn_output = tf.matmul(attn_probs, value_states)
tf.debugging.assert_equal(
shape_list(attn_output),
[bsz * self.num_heads, tgt_len, self.head_dim],
message=(
f"`attn_output` should be of size {(bsz, self.num_heads, tgt_len, self.head_dim)}, but is"
f" {shape_list(attn_output)}"
),
)
attn_output = tf.transpose(
tf.reshape(attn_output, (bsz, self.num_heads, tgt_len, self.head_dim)), (0, 2, 1, 3)
)
attn_output = tf.reshape(attn_output, (bsz, tgt_len, embed_dim))
attn_output = self.out_proj(attn_output)
attn_weights: tf.Tensor = tf.reshape(attn_weights, (bsz, self.num_heads, tgt_len, src_len))
return attn_output, attn_weights, past_key_value
class TFBartEncoderLayer(tf.keras.layers.Layer):
def __init__(self, config: BartConfig, **kwargs):
super().__init__(**kwargs)
self.embed_dim = config.d_model
self.self_attn = TFBartAttention(
self.embed_dim, config.encoder_attention_heads, dropout=config.attention_dropout, name="self_attn"
)
self.self_attn_layer_norm = tf.keras.layers.LayerNormalization(epsilon=1e-5, name="self_attn_layer_norm")
self.dropout = tf.keras.layers.Dropout(config.dropout)
self.activation_fn = get_tf_activation(config.activation_function)
self.activation_dropout = tf.keras.layers.Dropout(config.activation_dropout)
self.fc1 = tf.keras.layers.Dense(config.encoder_ffn_dim, name="fc1")
self.fc2 = tf.keras.layers.Dense(self.embed_dim, name="fc2")
self.final_layer_norm = tf.keras.layers.LayerNormalization(epsilon=1e-5, name="final_layer_norm")
def call(
self,
hidden_states: tf.Tensor,
attention_mask: np.ndarray | tf.Tensor | None,
layer_head_mask: tf.Tensor | None,
training: Optional[bool] = False,
) -> tf.Tensor:
"""
Args:
hidden_states (`tf.Tensor`): input to the layer of shape `(batch, seq_len, embed_dim)`
attention_mask (`tf.Tensor`): attention mask of size
`(batch, 1, tgt_len, src_len)` where padding elements are indicated by very large negative values.
layer_head_mask (`tf.Tensor`): mask for attention heads in a given layer of size
`(encoder_attention_heads,)`
"""
residual = hidden_states
hidden_states, self_attn_weights, _ = self.self_attn(
hidden_states=hidden_states, attention_mask=attention_mask, layer_head_mask=layer_head_mask
)
tf.debugging.assert_equal(
shape_list(hidden_states),
shape_list(residual),
message=f"Self attn modified the shape of query {shape_list(residual)} to {shape_list(hidden_states)}",
)
hidden_states = self.dropout(hidden_states, training=training)
hidden_states = residual + hidden_states
hidden_states = self.self_attn_layer_norm(hidden_states)
residual = hidden_states
hidden_states = self.activation_fn(self.fc1(hidden_states))
hidden_states = self.activation_dropout(hidden_states, training=training)
hidden_states = self.fc2(hidden_states)
hidden_states = self.dropout(hidden_states, training=training)
hidden_states = residual + hidden_states
hidden_states = self.final_layer_norm(hidden_states)
return hidden_states, self_attn_weights
class TFBartDecoderLayer(tf.keras.layers.Layer):
def __init__(self, config: BartConfig, **kwargs):
super().__init__(**kwargs)
self.embed_dim = config.d_model
self.self_attn = TFBartAttention(
embed_dim=self.embed_dim,
num_heads=config.decoder_attention_heads,
dropout=config.attention_dropout,
name="self_attn",
is_decoder=True,
)
self.dropout = tf.keras.layers.Dropout(config.dropout)
self.activation_fn = get_tf_activation(config.activation_function)
self.activation_dropout = tf.keras.layers.Dropout(config.activation_dropout)
self.self_attn_layer_norm = tf.keras.layers.LayerNormalization(epsilon=1e-5, name="self_attn_layer_norm")
self.encoder_attn = TFBartAttention(
self.embed_dim,
config.decoder_attention_heads,
dropout=config.attention_dropout,
name="encoder_attn",
is_decoder=True,
)
self.encoder_attn_layer_norm = tf.keras.layers.LayerNormalization(epsilon=1e-5, name="encoder_attn_layer_norm")
self.fc1 = tf.keras.layers.Dense(config.decoder_ffn_dim, name="fc1")
self.fc2 = tf.keras.layers.Dense(self.embed_dim, name="fc2")
self.final_layer_norm = tf.keras.layers.LayerNormalization(epsilon=1e-5, name="final_layer_norm")
def call(
self,
hidden_states: tf.Tensor,
attention_mask: np.ndarray | tf.Tensor | None = None,
encoder_hidden_states: np.ndarray | tf.Tensor | None = None,
encoder_attention_mask: np.ndarray | tf.Tensor | None = None,
layer_head_mask: tf.Tensor | None = None,
cross_attn_layer_head_mask: tf.Tensor | None = None,
past_key_value: Optional[Tuple[Tuple[Union[np.ndarray, tf.Tensor]]]] = None,
training: Optional[bool] = False,
) -> Tuple[tf.Tensor, tf.Tensor, Tuple[Tuple[tf.Tensor]]]:
"""
Args:
hidden_states (`tf.Tensor`): input to the layer of shape `(batch, seq_len, embed_dim)`
attention_mask (`tf.Tensor`): attention mask of size
`(batch, 1, tgt_len, src_len)` where padding elements are indicated by very large negative values.
encoder_hidden_states (`tf.Tensor`):
cross attention input to the layer of shape `(batch, seq_len, embed_dim)`
encoder_attention_mask (`tf.Tensor`): encoder attention mask of size
`(batch, 1, tgt_len, src_len)` where padding elements are indicated by very large negative values.
layer_head_mask (`tf.Tensor`): mask for attention heads in a given layer of size
`(decoder_attention_heads,)`
cross_attn_layer_head_mask (`tf.Tensor`): mask for heads of the cross-attention module.
`(decoder_attention_heads,)`
past_key_value (`Tuple(tf.Tensor)`): cached past key and value projection states
"""
residual = hidden_states
# Self Attention
# decoder uni-directional self-attention cached key/values tuple is at positions 1,2
self_attn_past_key_value = past_key_value[:2] if past_key_value is not None else None
# add present self-attn cache to positions 1,2 of present_key_value tuple
hidden_states, self_attn_weights, present_key_value = self.self_attn(
hidden_states=hidden_states,
past_key_value=self_attn_past_key_value,
attention_mask=attention_mask,
layer_head_mask=layer_head_mask,
)
hidden_states = self.dropout(hidden_states, training=training)
hidden_states = residual + hidden_states
hidden_states = self.self_attn_layer_norm(hidden_states)
# Cross-Attention Block
cross_attn_present_key_value = None
cross_attn_weights = None
if encoder_hidden_states is not None:
residual = hidden_states
# cross_attn cached key/values tuple is at positions 3,4 of present_key_value tuple
cross_attn_past_key_value = past_key_value[-2:] if past_key_value is not None else None
hidden_states, cross_attn_weights, cross_attn_present_key_value = self.encoder_attn(
hidden_states=hidden_states,
key_value_states=encoder_hidden_states,
attention_mask=encoder_attention_mask,
layer_head_mask=cross_attn_layer_head_mask,
past_key_value=cross_attn_past_key_value,
)
hidden_states = self.dropout(hidden_states, training=training)
hidden_states = residual + hidden_states
hidden_states = self.encoder_attn_layer_norm(hidden_states)
# add cross-attn to positions 3,4 of present_key_value tuple
present_key_value = present_key_value + cross_attn_present_key_value
# Fully Connected
residual = hidden_states
hidden_states = self.activation_fn(self.fc1(hidden_states))
hidden_states = self.activation_dropout(hidden_states, training=training)
hidden_states = self.fc2(hidden_states)
hidden_states = self.dropout(hidden_states, training=training)
hidden_states = residual + hidden_states
hidden_states = self.final_layer_norm(hidden_states)
return (
hidden_states,
self_attn_weights,
cross_attn_weights,
present_key_value,
)
class TFBartClassificationHead(tf.keras.layers.Layer):
"""Head for sentence-level classification tasks."""
def __init__(self, inner_dim: int, num_classes: int, pooler_dropout: float, name: str, **kwargs):
super().__init__(name=name, **kwargs)
self.dense = tf.keras.layers.Dense(inner_dim, name="dense")
self.dropout = tf.keras.layers.Dropout(pooler_dropout)
self.out_proj = tf.keras.layers.Dense(num_classes, name="out_proj")
def call(self, inputs):
hidden_states = self.dropout(inputs)
hidden_states = self.dense(hidden_states)
hidden_states = tf.keras.activations.tanh(hidden_states)
hidden_states = self.dropout(hidden_states)
hidden_states = self.out_proj(hidden_states)
return hidden_states
class TFBartPretrainedModel(TFPreTrainedModel):
config_class = BartConfig
base_model_prefix = "model"
@property
def dummy_inputs(self):
dummy_inputs = super().dummy_inputs
# Dummy inputs should not contain the default val of 1
# as this is the padding token and some assertions check it
dummy_inputs["input_ids"] = dummy_inputs["input_ids"] * 2
if "decoder_input_ids" in dummy_inputs:
dummy_inputs["decoder_input_ids"] = dummy_inputs["decoder_input_ids"] * 2
return dummy_inputs
BART_START_DOCSTRING = r"""
This model inherits from [`TFPreTrainedModel`]. Check the superclass documentation for the generic methods the
library implements for all its model (such as downloading or saving, resizing the input embeddings, pruning heads
etc.)
This model is also a [tf.keras.Model](https://www.tensorflow.org/api_docs/python/tf/keras/Model) subclass. Use it
as a regular TF 2.0 Keras Model and refer to the TF 2.0 documentation for all matter related to general usage and
behavior.
<Tip>
TensorFlow models and layers in `transformers` accept two formats as input:
- having all inputs as keyword arguments (like PyTorch models), or
- having all inputs as a list, tuple or dict in the first positional argument.
The reason the second format is supported is that Keras methods prefer this format when passing inputs to models
and layers. Because of this support, when using methods like `model.fit()` things should "just work" for you - just
pass your inputs and labels in any format that `model.fit()` supports! If, however, you want to use the second
format outside of Keras methods like `fit()` and `predict()`, such as when creating your own layers or models with
the Keras `Functional` API, there are three possibilities you can use to gather all the input Tensors in the first
positional argument:
- a single Tensor with `input_ids` only and nothing else: `model(input_ids)`
- a list of varying length with one or several input Tensors IN THE ORDER given in the docstring:
`model([input_ids, attention_mask])` or `model([input_ids, attention_mask, token_type_ids])`
- a dictionary with one or several input Tensors associated to the input names given in the docstring:
`model({"input_ids": input_ids, "token_type_ids": token_type_ids})`
Note that when creating models and layers with
[subclassing](https://keras.io/guides/making_new_layers_and_models_via_subclassing/) then you don't need to worry
about any of this, as you can just pass inputs like you would to any other Python function!
</Tip>
Args:
config ([`BartConfig`]): Model configuration class with all the parameters of the model.
Initializing with a config file does not load the weights associated with the model, only the
configuration. Check out the [`~TFPreTrainedModel.from_pretrained`] method to load the model weights.
"""
BART_GENERATION_EXAMPLE = r"""
Summarization example:
```python
>>> from transformers import AutoTokenizer, TFBartForConditionalGeneration
>>> model = TFBartForConditionalGeneration.from_pretrained("facebook/bart-large")
>>> tokenizer = AutoTokenizer.from_pretrained("facebook/bart-large")
>>> ARTICLE_TO_SUMMARIZE = "My friends are cool but they eat too many carbs."
>>> inputs = tokenizer([ARTICLE_TO_SUMMARIZE], max_length=1024, return_tensors="tf")
>>> # Generate Summary
>>> summary_ids = model.generate(inputs["input_ids"], num_beams=4, max_length=5)
>>> print(tokenizer.batch_decode(summary_ids, skip_special_tokens=True, clean_up_tokenization_spaces=False))
```
Mask filling example:
```python
>>> from transformers import AutoTokenizer, TFBartForConditionalGeneration
>>> tokenizer = AutoTokenizer.from_pretrained("facebook/bart-large")
>>> TXT = "My friends are <mask> but they eat too many carbs."
>>> model = TFBartForConditionalGeneration.from_pretrained("facebook/bart-large")
>>> input_ids = tokenizer([TXT], return_tensors="tf")["input_ids"]
>>> logits = model(input_ids).logits
>>> probs = tf.nn.softmax(logits[0])
>>> # probs[5] is associated with the mask token
```
"""
BART_INPUTS_DOCSTRING = r"""
Args:
input_ids (`tf.Tensor` of shape `({0})`):
Indices of input sequence tokens in the vocabulary.
Indices can be obtained using [`AutoTokenizer`]. See [`PreTrainedTokenizer.encode`] and
[`PreTrainedTokenizer.__call__`] for details.
[What are input IDs?](../glossary#input-ids)
attention_mask (`tf.Tensor` of shape `({0})`, *optional*):
Mask to avoid performing attention on padding token indices. Mask values selected in `[0, 1]`:
- 1 for tokens that are **not masked**,
- 0 for tokens that are **masked**.
[What are attention masks?](../glossary#attention-mask)
decoder_input_ids (`tf.Tensor` of shape `(batch_size, target_sequence_length)`, *optional*):
Indices of decoder input sequence tokens in the vocabulary.
Indices can be obtained using [`AutoTokenizer`]. See [`PreTrainedTokenizer.encode`] and
[`PreTrainedTokenizer.__call__`] for details.
[What are decoder input IDs?](../glossary#decoder-input-ids)
Bart uses the `eos_token_id` as the starting token for `decoder_input_ids` generation. If `past_key_values`
is used, optionally only the last `decoder_input_ids` have to be input (see `past_key_values`).
For translation and summarization training, `decoder_input_ids` should be provided. If no
`decoder_input_ids` is provided, the model will create this tensor by shifting the `input_ids` to the right
for denoising pre-training following the paper.
decoder_attention_mask (`tf.Tensor` of shape `(batch_size, target_sequence_length)`, *optional*):
will be made by default and ignore pad tokens. It is not recommended to set this for most use cases.
decoder_position_ids (`tf.Tensor` of shape `(batch_size, sequence_length)`, *optional*):
Indices of positions of each decoder input sequence tokens in the position embeddings. Selected in the
range `[0, config.max_position_embeddings - 1]`.
head_mask (`tf.Tensor` of shape `(encoder_layers, encoder_attention_heads)`, *optional*):
Mask to nullify selected heads of the attention modules in the encoder. Mask values selected in `[0, 1]`:
- 1 indicates the head is **not masked**,
- 0 indicates the head is **masked**.
decoder_head_mask (`tf.Tensor` of shape `(decoder_layers, decoder_attention_heads)`, *optional*):
Mask to nullify selected heads of the attention modules in the decoder. Mask values selected in `[0, 1]`:
- 1 indicates the head is **not masked**,
- 0 indicates the head is **masked**.
cross_attn_head_mask (`tf.Tensor` of shape `(decoder_layers, decoder_attention_heads)`, *optional*):
Mask to nullify selected heads of the cross-attention modules. Mask values selected in `[0, 1]`:
- 1 indicates the head is **not masked**,
- 0 indicates the head is **masked**.
encoder_outputs (`tf.FloatTensor`, *optional*):
hidden states at the output of the last layer of the encoder. Used in the cross-attention of the decoder.
of shape `(batch_size, sequence_length, hidden_size)` is a sequence of
past_key_values (`Tuple[Tuple[tf.Tensor]]` of length `config.n_layers`)
contains precomputed key and value hidden states of the attention blocks. Can be used to speed up decoding.
If `past_key_values` are used, the user can optionally input only the last `decoder_input_ids` (those that
don't have their past key value states given to this model) of shape `(batch_size, 1)` instead of all
`decoder_input_ids` of shape `(batch_size, sequence_length)`.
use_cache (`bool`, *optional*, defaults to `True`):
If set to `True`, `past_key_values` key value states are returned and can be used to speed up decoding (see
`past_key_values`). Set to `False` during training, `True` during generation
output_attentions (`bool`, *optional*):
Whether or not to return the attentions tensors of all attention layers. See `attentions` under returned
tensors for more detail. This argument can be used only in eager mode, in graph mode the value in the
config will be used instead.
output_hidden_states (`bool`, *optional*):
Whether or not to return the hidden states of all layers. See `hidden_states` under returned tensors for
more detail. This argument can be used only in eager mode, in graph mode the value in the config will be
used instead.
return_dict (`bool`, *optional*):
Whether or not to return a [`~utils.ModelOutput`] instead of a plain tuple. This argument can be used in
eager mode, in graph mode the value will always be set to True.
training (`bool`, *optional*, defaults to `False`):
Whether or not to use the model in training mode (some modules like dropout modules have different
behaviors between training and evaluation).
"""
@keras_serializable
class TFBartEncoder(tf.keras.layers.Layer):
config_class = BartConfig
"""
Transformer encoder consisting of *config.encoder_layers* self attention layers. Each layer is a
[`TFBartEncoderLayer`].
Args:
config: BartConfig
"""
def __init__(self, config: BartConfig, embed_tokens: Optional[tf.keras.layers.Embedding] = None, **kwargs):
super().__init__(**kwargs)
self.config = config
self.dropout = tf.keras.layers.Dropout(config.dropout)
self.layerdrop = config.encoder_layerdrop
self.padding_idx = config.pad_token_id
self.max_source_positions = config.max_position_embeddings
self.embed_scale = tf.math.sqrt(float(config.d_model)) if config.scale_embedding else 1.0
self.embed_tokens = embed_tokens
self.embed_positions = TFBartLearnedPositionalEmbedding(
config.max_position_embeddings,
config.d_model,
name="embed_positions",
)
self.layers = [TFBartEncoderLayer(config, name=f"layers.{i}") for i in range(config.encoder_layers)]
self.layernorm_embedding = tf.keras.layers.LayerNormalization(epsilon=1e-5, name="layernorm_embedding")
@unpack_inputs
def call(
self,
input_ids: TFModelInputType | None = None,
inputs_embeds: np.ndarray | tf.Tensor | None = None,
attention_mask: np.ndarray | tf.Tensor | None = None,
head_mask: np.ndarray | tf.Tensor | None = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
training: Optional[bool] = False,
) -> Union[TFBaseModelOutput, Tuple[tf.Tensor]]:
"""
Args:
input_ids (`tf.Tensor` of shape `(batch_size, sequence_length)`):
Indices of input sequence tokens in the vocabulary. Padding will be ignored by default should you
provide it.
Indices can be obtained using [`AutoTokenizer`]. See [`PreTrainedTokenizer.encode`] and
[`PreTrainedTokenizer.__call__`] for details.
[What are input IDs?](../glossary#input-ids)
attention_mask (`tf.Tensor` of shape `(batch_size, sequence_length)`, *optional*):
Mask to avoid performing attention on padding token indices. Mask values selected in `[0, 1]`:
- 1 for tokens that are **not masked**,
- 0 for tokens that are **masked**.
[What are attention masks?](../glossary#attention-mask)
head_mask (`tf.Tensor` of shape `(encoder_layers, encoder_attention_heads)`, `optional):
Mask to nullify selected heads of the attention modules. Mask values selected in `[0, 1]`:
- 1 indicates the head is **not masked**,
- 0 indicates the head is **masked**.
inputs_embeds (`tf.Tensor` of shape `(batch_size, sequence_length, hidden_size)`, *optional*):
Optionally, instead of passing `input_ids` you can choose to directly pass an embedded representation.
This is useful if you want more control over how to convert `input_ids` indices into associated vectors
than the model's internal embedding lookup matrix.
output_attentions (`bool`, *optional*):
Whether or not to return the attentions tensors of all attention layers. See `attentions` under
returned tensors for more detail.
output_hidden_states (`bool`, *optional*):
Whether or not to return the hidden states of all layers. See `hidden_states` under returned tensors
for more detail.
return_dict (`bool`, *optional*):
Whether or not to return a [`~utils.ModelOutput`] instead of a plain tuple.
"""
if input_ids is not None and inputs_embeds is not None:
raise ValueError("You cannot specify both input_ids and inputs_embeds at the same time")
elif input_ids is not None:
input_shape = shape_list(input_ids)
elif inputs_embeds is not None:
input_shape = shape_list(inputs_embeds)[:-1]
else:
raise ValueError("You have to specify either input_ids or inputs_embeds")
if inputs_embeds is None:
# if `self.embed_tokens.load_weight_prefix` is set, runs the embedding operation with the correct name
# scope, so that its weights are registered with the desired name for loading/storing. When `tf.name_scope`
# is used with a name ending in `/`, that name replaces the current name scope.
# (embeddings with tf.name_scope: self.embed_tokens.load_weight_prefix/self.embed_tokens.name/embeddings:0)
context = []
if hasattr(self.embed_tokens, "load_weight_prefix"):
context.append(tf.name_scope(self.embed_tokens.load_weight_prefix + "/"))
with ContextManagers(context):
check_embeddings_within_bounds(input_ids, self.embed_tokens.input_dim)
inputs_embeds = self.embed_tokens(input_ids) * self.embed_scale
embed_pos = self.embed_positions(input_shape)
hidden_states = inputs_embeds + embed_pos
hidden_states = self.layernorm_embedding(hidden_states)
hidden_states = self.dropout(hidden_states, training=training)
# check attention mask and invert
if attention_mask is not None:
# [bsz, seq_len] -> [bsz, 1, tgt_seq_len, src_seq_len]
attention_mask = _expand_mask(attention_mask)
else:
attention_mask = None
encoder_states = () if output_hidden_states else None
all_attentions = () if output_attentions else None
# check if head_mask has a correct number of layers specified if desired
if head_mask is not None:
tf.debugging.assert_equal(
shape_list(head_mask)[0],
len(self.layers),
message=(
f"The head_mask should be specified for {len(self.layers)} layers, but it is for"
f" {shape_list(head_mask)[0]}."
),
)
# encoder layers
for idx, encoder_layer in enumerate(self.layers):
if output_hidden_states:
encoder_states = encoder_states + (hidden_states,)
# add LayerDrop (see https://arxiv.org/abs/1909.11556 for description)
dropout_probability = random.uniform(0, 1)
if training and (dropout_probability < self.layerdrop): # skip the layer
continue
hidden_states, attn = encoder_layer(
hidden_states,
attention_mask,
head_mask[idx] if head_mask is not None else None,
)
if output_attentions:
all_attentions += (attn,)
if output_hidden_states:
encoder_states = encoder_states + (hidden_states,)
if not return_dict:
return tuple(v for v in [hidden_states, encoder_states, all_attentions] if v is not None)
return TFBaseModelOutput(
last_hidden_state=hidden_states, hidden_states=encoder_states, attentions=all_attentions
)
@keras_serializable
class TFBartDecoder(tf.keras.layers.Layer):
config_class = BartConfig
"""
Transformer decoder consisting of *config.decoder_layers* layers. Each layer is a [`TFBartDecoderLayer`]
Args:
config: BartConfig
embed_tokens: output embedding
"""
def __init__(self, config: BartConfig, embed_tokens: Optional[tf.keras.layers.Embedding] = None, **kwargs):
super().__init__(**kwargs)
self.config = config
self.padding_idx = config.pad_token_id
self.embed_tokens = embed_tokens
self.layerdrop = config.decoder_layerdrop
self.embed_positions = TFBartLearnedPositionalEmbedding(
config.max_position_embeddings,
config.d_model,
name="embed_positions",
)
self.embed_scale = tf.math.sqrt(float(config.d_model)) if config.scale_embedding else 1.0
self.layers = [TFBartDecoderLayer(config, name=f"layers.{i}") for i in range(config.decoder_layers)]
self.layernorm_embedding = tf.keras.layers.LayerNormalization(epsilon=1e-5, name="layernorm_embedding")
self.dropout = tf.keras.layers.Dropout(config.dropout)
@unpack_inputs
def call(
self,
input_ids: TFModelInputType | None = None,
inputs_embeds: np.ndarray | tf.Tensor | None = None,
attention_mask: np.ndarray | tf.Tensor | None = None,
position_ids: np.ndarray | tf.Tensor | None = None,
encoder_hidden_states: np.ndarray | tf.Tensor | None = None,
encoder_attention_mask: np.ndarray | tf.Tensor | None = None,
head_mask: np.ndarray | tf.Tensor | None = None,
cross_attn_head_mask: np.ndarray | tf.Tensor | None = None,
past_key_values: Optional[Tuple[Tuple[Union[np.ndarray, tf.Tensor]]]] = None,
use_cache: Optional[bool] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
training: Optional[bool] = False,
) -> Union[TFBaseModelOutputWithPastAndCrossAttentions, Tuple[tf.Tensor]]:
r"""
Args:
input_ids (`tf.Tensor` of shape `(batch_size, sequence_length)`):
Indices of input sequence tokens in the vocabulary. Padding will be ignored by default should you
provide it.
Indices can be obtained using [`AutoTokenizer`]. See [`PreTrainedTokenizer.encode`] and
[`PreTrainedTokenizer.__call__`] for details.
[What are input IDs?](../glossary#input-ids)
attention_mask (`tf.Tensor` of shape `(batch_size, sequence_length)`, *optional*):
Mask to avoid performing attention on padding token indices. Mask values selected in `[0, 1]`:
- 1 for tokens that are **not masked**,
- 0 for tokens that are **masked**.
[What are attention masks?](../glossary#attention-mask)
position_ids (`tf.Tensor` of shape `(batch_size, sequence_length)`, *optional*):
Indices of positions of each decoder input sequence tokens in the position embeddings. Selected in the
range `[0, config.max_position_embeddings - 1]`.
encoder_hidden_states (`tf.Tensor` of shape `(batch_size, encoder_sequence_length, hidden_size)`, *optional*):
Sequence of hidden-states at the output of the last layer of the encoder. Used in the cross-attention
of the decoder.
encoder_attention_mask (`tf.Tensor` of shape `(batch_size, encoder_sequence_length)`, *optional*):
Mask to avoid performing cross-attention on padding tokens indices of encoder input_ids. Mask values
selected in `[0, 1]`:
- 1 for tokens that are **not masked**,
- 0 for tokens that are **masked**.
[What are attention masks?](../glossary#attention-mask)
head_mask (`tf.Tensor` of shape `(decoder_layers, decoder_attention_heads)`, *optional*):
Mask to nullify selected heads of the attention modules. Mask values selected in `[0, 1]`:
- 1 indicates the head is **not masked**,
- 0 indicates the head is **masked**.
cross_attn_head_mask (`tf.Tensor` of shape `(decoder_layers, decoder_attention_heads)`, *optional*):
Mask to nullify selected heads of the cross-attention modules. Mask values selected in `[0, 1]`:
- 1 indicates the head is **not masked**,
- 0 indicates the head is **masked**.
past_key_values (`Tuple[Tuple[tf.Tensor]]` of length `config.n_layers` with each tuple having 2 tuples each of which has 2 tensors of shape `(batch_size, num_heads, sequence_length - 1, embed_size_per_head)`):
Contains precomputed key and value hidden-states of the attention blocks. Can be used to speed up
decoding.
If `past_key_values` are used, the user can optionally input only the last `decoder_input_ids` (those
that don't have their past key value states given to this model) of shape `(batch_size, 1)` instead of
all `decoder_input_ids` of shape `(batch_size, sequence_length)`. inputs_embeds (`tf.Tensor` of shape
`(batch_size, sequence_length, hidden_size)`, *optional*): Optionally, instead of passing `input_ids`
you can choose to directly pass an embedded representation. This is useful if you want more control
over how to convert `input_ids` indices into associated vectors than the model's internal embedding
lookup matrix.
output_attentions (`bool`, *optional*):
Whether or not to return the attentions tensors of all attention layers. See `attentions` under
returned tensors for more detail.
output_hidden_states (`bool`, *optional*):
Whether or not to return the hidden states of all layers. See `hidden_states` under returned tensors
for more detail.
return_dict (`bool`, *optional*):
Whether or not to return a [`~utils.ModelOutput`] instead of a plain tuple.
"""
if input_ids is not None and inputs_embeds is not None:
raise ValueError("You cannot specify both decoder_input_ids and decoder_inputs_embeds at the same time")
elif input_ids is not None:
input_shape = shape_list(input_ids)
elif inputs_embeds is not None:
input_shape = shape_list(inputs_embeds)[:-1]
else:
raise ValueError("You have to specify either decoder_input_ids or decoder_inputs_embeds")
past_key_values_length = shape_list(past_key_values[0][0])[2] if past_key_values is not None else 0
# embed positions
if position_ids is None:
positions = self.embed_positions(input_shape, past_key_values_length)
else:
positions = self.embed_positions(input_shape, position_ids=position_ids)
if inputs_embeds is None:
# if `self.embed_tokens.load_weight_prefix` is set, runs the embedding operation with the correct name
# scope, so that its weights are registered with the desired name for loading/storing. When `tf.name_scope`
# is used with a name ending in `/`, that name replaces the current name scope.
# (embeddings with tf.name_scope: self.embed_tokens.load_weight_prefix/self.embed_tokens.name/embeddings:0)
context = []
if hasattr(self.embed_tokens, "load_weight_prefix"):
context.append(tf.name_scope(self.embed_tokens.load_weight_prefix + "/"))
with ContextManagers(context):
check_embeddings_within_bounds(input_ids, self.embed_tokens.input_dim)
inputs_embeds = self.embed_tokens(input_ids) * self.embed_scale
hidden_states = inputs_embeds
# [bsz, seq_len] -> [bsz, 1, tgt_seq_len, src_seq_len]
if input_shape[-1] > 1:
combined_attention_mask = _make_causal_mask(input_shape, past_key_values_length=past_key_values_length)
else:
combined_attention_mask = _expand_mask(
tf.ones((input_shape[0], input_shape[1] + past_key_values_length)), tgt_len=input_shape[-1]
)
if attention_mask is not None:
combined_attention_mask = combined_attention_mask + _expand_mask(attention_mask, tgt_len=input_shape[-1])
if encoder_hidden_states is not None and encoder_attention_mask is not None:
# [bsz, seq_len] -> [bsz, 1, tgt_seq_len, src_seq_len]
encoder_attention_mask = _expand_mask(encoder_attention_mask, tgt_len=input_shape[-1])
hidden_states = self.layernorm_embedding(hidden_states + positions)
hidden_states = self.dropout(hidden_states, training=training)
# decoder layers
all_hidden_states = () if output_hidden_states else None
all_self_attns = () if output_attentions else None
all_cross_attns = () if (output_attentions and encoder_hidden_states is not None) else None
present_key_values = () if use_cache else None
# check if head_mask and cross_attn_head_mask have a correct number of layers specified if desired
for attn_mask_name, attn_mask in [("head_mask", head_mask), ("cross_attn_head_mask", cross_attn_head_mask)]:
if attn_mask is not None:
tf.debugging.assert_equal(
shape_list(attn_mask)[0],
len(self.layers),
message=(
f"The {attn_mask_name} should be specified for {len(self.layers)} layers, but it is for"
f" {shape_list(attn_mask)[0]}."
),
)
for idx, decoder_layer in enumerate(self.layers):
# add LayerDrop (see https://arxiv.org/abs/1909.11556 for description)
if output_hidden_states:
all_hidden_states += (hidden_states,)
dropout_probability = random.uniform(0, 1)
if training and (dropout_probability < self.layerdrop):
continue
past_key_value = past_key_values[idx] if past_key_values is not None else None
hidden_states, layer_self_attn, layer_cross_attn, present_key_value = decoder_layer(
hidden_states,
attention_mask=combined_attention_mask,
encoder_hidden_states=encoder_hidden_states,
encoder_attention_mask=encoder_attention_mask,
layer_head_mask=head_mask[idx] if head_mask is not None else None,
cross_attn_layer_head_mask=cross_attn_head_mask[idx] if cross_attn_head_mask is not None else None,
past_key_value=past_key_value,
)
if use_cache:
present_key_values += (present_key_value,)
if output_attentions:
all_self_attns += (layer_self_attn,)
if encoder_hidden_states is not None:
all_cross_attns += (layer_cross_attn,)
if output_hidden_states:
all_hidden_states += (hidden_states,)
if not return_dict:
return hidden_states, present_key_values, all_hidden_states, all_self_attns, all_cross_attns
else:
return TFBaseModelOutputWithPastAndCrossAttentions(
last_hidden_state=hidden_states,
past_key_values=present_key_values,
hidden_states=all_hidden_states,
attentions=all_self_attns,
cross_attentions=all_cross_attns,
)
@keras_serializable
class TFBartMainLayer(tf.keras.layers.Layer):
config_class = BartConfig
def __init__(self, config: BartConfig, load_weight_prefix=None, **kwargs):
super().__init__(**kwargs)
self.config = config
self.shared = tf.keras.layers.Embedding(
input_dim=config.vocab_size,
output_dim=config.d_model,
embeddings_initializer=tf.keras.initializers.TruncatedNormal(stddev=self.config.init_std),
name="model.shared",
)
# Additional attribute to specify the expected name scope of the layer (for loading/storing weights)
self.shared.load_weight_prefix = "model.shared" if load_weight_prefix is None else load_weight_prefix
self.encoder = TFBartEncoder(config, self.shared, name="encoder")
self.decoder = TFBartDecoder(config, self.shared, name="decoder")
def get_input_embeddings(self):
return self.shared
def set_input_embeddings(self, new_embeddings):
self.shared = new_embeddings
self.encoder.embed_tokens = self.shared
self.decoder.embed_tokens = self.shared
@unpack_inputs
def call(
self,
input_ids: TFModelInputType | None = None,
attention_mask: np.ndarray | tf.Tensor | None = None,
decoder_input_ids: np.ndarray | tf.Tensor | None = None,
decoder_attention_mask: np.ndarray | tf.Tensor | None = None,
decoder_position_ids: np.ndarray | tf.Tensor | None = None,
head_mask: np.ndarray | tf.Tensor | None = None,
decoder_head_mask: np.ndarray | tf.Tensor | None = None,
cross_attn_head_mask: np.ndarray | tf.Tensor | None = None,
encoder_outputs: Optional[Union[Tuple, TFBaseModelOutput]] = None,
past_key_values: Optional[Tuple[Tuple[Union[np.ndarray, tf.Tensor]]]] = None,
inputs_embeds: np.ndarray | tf.Tensor | None = None,
decoder_inputs_embeds: np.ndarray | tf.Tensor | None = None,
use_cache: Optional[bool] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
training: Optional[bool] = False,
**kwargs,
) -> Union[TFSeq2SeqModelOutput, Tuple[tf.Tensor]]:
# different to other models, Bart automatically creates decoder_input_ids from
# input_ids if no decoder_input_ids are provided
if decoder_input_ids is None and decoder_inputs_embeds is None:
if input_ids is None:
raise ValueError(
"If no `decoder_input_ids` or `decoder_inputs_embeds` are "
"passed, `input_ids` cannot be `None`. Please pass either "
"`input_ids` or `decoder_input_ids` or `decoder_inputs_embeds`."
)
decoder_input_ids = shift_tokens_right(
input_ids, self.config.pad_token_id, self.config.decoder_start_token_id
)
if encoder_outputs is None:
encoder_outputs = self.encoder(
input_ids=input_ids,
attention_mask=attention_mask,
head_mask=head_mask,
inputs_embeds=inputs_embeds,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
training=training,
)
# If the user passed a tuple for encoder_outputs, we wrap it in a TFBaseModelOutput when return_dict=True
elif return_dict and not isinstance(encoder_outputs, TFBaseModelOutput):
encoder_outputs = TFBaseModelOutput(
last_hidden_state=encoder_outputs[0],
hidden_states=encoder_outputs[1] if len(encoder_outputs) > 1 else None,
attentions=encoder_outputs[2] if len(encoder_outputs) > 2 else None,
)
# If the user passed a TFBaseModelOutput for encoder_outputs, we wrap it in a tuple when return_dict=False
elif not return_dict and not isinstance(encoder_outputs, tuple):
encoder_outputs = encoder_outputs.to_tuple()
decoder_outputs = self.decoder(
decoder_input_ids,
attention_mask=decoder_attention_mask,
position_ids=decoder_position_ids,
encoder_hidden_states=encoder_outputs[0],
encoder_attention_mask=attention_mask,
head_mask=decoder_head_mask,
cross_attn_head_mask=cross_attn_head_mask,
past_key_values=past_key_values,
inputs_embeds=decoder_inputs_embeds,
use_cache=use_cache,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
training=training,
)
if not return_dict:
return decoder_outputs + encoder_outputs
return TFSeq2SeqModelOutput(
last_hidden_state=decoder_outputs.last_hidden_state,
past_key_values=decoder_outputs.past_key_values,
decoder_hidden_states=decoder_outputs.hidden_states,
decoder_attentions=decoder_outputs.attentions,
cross_attentions=decoder_outputs.cross_attentions,
encoder_last_hidden_state=encoder_outputs.last_hidden_state,
encoder_hidden_states=encoder_outputs.hidden_states,
encoder_attentions=encoder_outputs.attentions,
)
@add_start_docstrings(
"The bare BART Model outputting raw hidden-states without any specific head on top.",
BART_START_DOCSTRING,
)
class TFBartModel(TFBartPretrainedModel):
_requires_load_weight_prefix = True
def __init__(self, config: BartConfig, load_weight_prefix=None, *inputs, **kwargs):
super().__init__(config, *inputs, **kwargs)
self.model = TFBartMainLayer(config, load_weight_prefix=load_weight_prefix, name="model")
def get_encoder(self):
return self.model.encoder
def get_decoder(self):
return self.model.decoder
@add_start_docstrings_to_model_forward(BART_INPUTS_DOCSTRING.format("batch_size, sequence_length"))
@add_code_sample_docstrings(
checkpoint=_CHECKPOINT_FOR_DOC,
output_type=TFSeq2SeqModelOutput,
config_class=_CONFIG_FOR_DOC,
)
@unpack_inputs
def call(
self,
input_ids: TFModelInputType | None = None,
attention_mask: np.ndarray | tf.Tensor | None = None,
decoder_input_ids: np.ndarray | tf.Tensor | None = None,
decoder_attention_mask: np.ndarray | tf.Tensor | None = None,
decoder_position_ids: np.ndarray | tf.Tensor | None = None,
head_mask: np.ndarray | tf.Tensor | None = None,
decoder_head_mask: np.ndarray | tf.Tensor | None = None,
cross_attn_head_mask: np.ndarray | tf.Tensor | None = None,
encoder_outputs: Optional[Union[Tuple, TFBaseModelOutput]] = None,
past_key_values: Optional[Tuple[Tuple[Union[np.ndarray, tf.Tensor]]]] = None,
inputs_embeds: np.ndarray | tf.Tensor | None = None,
decoder_inputs_embeds: np.ndarray | tf.Tensor | None = None,
use_cache: Optional[bool] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
training: Optional[bool] = False,
**kwargs,
) -> Union[TFBaseModelOutput, Tuple[tf.Tensor]]:
outputs = self.model(
input_ids=input_ids,
attention_mask=attention_mask,
decoder_input_ids=decoder_input_ids,
decoder_attention_mask=decoder_attention_mask,
decoder_position_ids=decoder_position_ids,
head_mask=head_mask,
decoder_head_mask=decoder_head_mask,
cross_attn_head_mask=cross_attn_head_mask,
encoder_outputs=encoder_outputs,
past_key_values=past_key_values,
inputs_embeds=inputs_embeds,
decoder_inputs_embeds=decoder_inputs_embeds,
use_cache=use_cache,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
training=training,
)
return outputs
def serving_output(self, output):
pkv = tf.tuple(output.past_key_values)[1] if self.config.use_cache else None
dec_hs = tf.convert_to_tensor(output.decoder_hidden_states) if self.config.output_hidden_states else None
dec_attns = tf.convert_to_tensor(output.decoder_attentions) if self.config.output_attentions else None
cross_attns = tf.convert_to_tensor(output.cross_attentions) if self.config.output_attentions else None
enc_hs = tf.convert_to_tensor(output.encoder_hidden_states) if self.config.output_hidden_states else None
enc_attns = tf.convert_to_tensor(output.encoder_attentions) if self.config.output_attentions else None
return TFSeq2SeqModelOutput(
last_hidden_state=output.last_hidden_state,
past_key_values=pkv,
decoder_hidden_states=dec_hs,
decoder_attentions=dec_attns,
cross_attentions=cross_attns,
encoder_last_hidden_state=output.encoder_last_hidden_state,
encoder_hidden_states=enc_hs,
encoder_attentions=enc_attns,
)
class BiasLayer(tf.keras.layers.Layer):
"""
Bias as a layer. It is used for serialization purposes: `tf.keras.Model.save_weights` stores on a per-layer basis,
so all weights have to be registered in a layer.
"""
def __init__(self, shape, initializer, trainable, name, **kwargs):
super().__init__(name=name, **kwargs)
# Note: the name of this variable will NOT be scoped when serialized, i.e. it will not be in the format of
# "outer_layer/inner_layer/.../name:0". Instead, it will be "name:0". For further details, see:
# https://github.com/huggingface/transformers/pull/18833#issuecomment-1233090214
self.bias = self.add_weight(name=name, shape=shape, initializer=initializer, trainable=trainable)
def call(self, x):
return x + self.bias
@add_start_docstrings(
"The BART Model with a language modeling head. Can be used for summarization.",
BART_START_DOCSTRING,
)
class TFBartForConditionalGeneration(TFBartPretrainedModel, TFCausalLanguageModelingLoss):
_keys_to_ignore_on_load_missing = [r"final_logits_bias"]
_requires_load_weight_prefix = True
def __init__(self, config, load_weight_prefix=None, *inputs, **kwargs):
super().__init__(config, *inputs, **kwargs)
self.model = TFBartMainLayer(config, load_weight_prefix=load_weight_prefix, name="model")
self.use_cache = config.use_cache
# final_bias_logits is registered as a buffer in pytorch, so not trainable for the sake of consistency.
self.bias_layer = BiasLayer(
name="final_logits_bias", shape=[1, config.vocab_size], initializer="zeros", trainable=False
)
def get_decoder(self):
return self.model.decoder
def get_encoder(self):
return self.model.encoder
def get_output_embeddings(self):
return self.get_input_embeddings()
def set_output_embeddings(self, value):
self.set_input_embeddings(value)
def get_bias(self):
return {"final_logits_bias": self.bias_layer.bias}
def set_bias(self, value):
# Replaces the existing layers containing bias for correct (de)serialization.
vocab_size = value["final_logits_bias"].shape[-1]
self.bias_layer = BiasLayer(
name="final_logits_bias", shape=[1, vocab_size], initializer="zeros", trainable=False
)
self.bias_layer.bias.assign(value["final_logits_bias"])
@add_start_docstrings_to_model_forward(BART_INPUTS_DOCSTRING)
@replace_return_docstrings(output_type=TFSeq2SeqLMOutput, config_class=_CONFIG_FOR_DOC)
@add_end_docstrings(BART_GENERATION_EXAMPLE)
@unpack_inputs
def call(
self,
input_ids: TFModelInputType | None = None,
attention_mask: np.ndarray | tf.Tensor | None = None,
decoder_input_ids: np.ndarray | tf.Tensor | None = None,
decoder_attention_mask: np.ndarray | tf.Tensor | None = None,
decoder_position_ids: np.ndarray | tf.Tensor | None = None,
head_mask: np.ndarray | tf.Tensor | None = None,
decoder_head_mask: np.ndarray | tf.Tensor | None = None,
cross_attn_head_mask: np.ndarray | tf.Tensor | None = None,
encoder_outputs: Optional[TFBaseModelOutput] = None,
past_key_values: Optional[Tuple[Tuple[Union[np.ndarray, tf.Tensor]]]] = None,
inputs_embeds: np.ndarray | tf.Tensor | None = None,
decoder_inputs_embeds: np.ndarray | tf.Tensor | None = None,
use_cache: Optional[bool] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
labels: tf.Tensor | None = None,
training: Optional[bool] = False,
) -> Union[TFSeq2SeqLMOutput, Tuple[tf.Tensor]]:
r"""
labels (`tf.Tensor` of shape `(batch_size, sequence_length)`, *optional*):
Labels for computing the masked language modeling loss. Indices should either be in `[0, ...,
config.vocab_size]` or -100 (see `input_ids` docstring). Tokens with indices set to `-100` are ignored
(masked), the loss is only computed for the tokens with labels in `[0, ..., config.vocab_size]`.
Returns:
"""
if labels is not None:
labels = tf.where(
labels == self.config.pad_token_id,
tf.cast(tf.fill(shape_list(labels), -100), labels.dtype),
labels,
)
use_cache = False
if decoder_input_ids is None and decoder_inputs_embeds is None:
decoder_input_ids = shift_tokens_right(
labels, self.config.pad_token_id, self.config.decoder_start_token_id
)
outputs = self.model(
input_ids,
attention_mask=attention_mask,
decoder_input_ids=decoder_input_ids,
encoder_outputs=encoder_outputs,
decoder_attention_mask=decoder_attention_mask,
decoder_position_ids=decoder_position_ids,
head_mask=head_mask,
decoder_head_mask=decoder_head_mask,
cross_attn_head_mask=cross_attn_head_mask,
past_key_values=past_key_values,
inputs_embeds=inputs_embeds,
decoder_inputs_embeds=decoder_inputs_embeds,
use_cache=use_cache,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
training=training,
)
lm_logits = tf.matmul(outputs[0], self.model.shared.weights, transpose_b=True)
lm_logits = self.bias_layer(lm_logits)
masked_lm_loss = None if labels is None else self.hf_compute_loss(labels, lm_logits)
if not return_dict:
output = (lm_logits,) + outputs[1:]
return ((masked_lm_loss,) + output) if masked_lm_loss is not None else output
return TFSeq2SeqLMOutput(
loss=masked_lm_loss,
logits=lm_logits,
past_key_values=outputs.past_key_values, # index 1 of d outputs
decoder_hidden_states=outputs.decoder_hidden_states, # index 2 of d outputs
decoder_attentions=outputs.decoder_attentions, # index 3 of d outputs
cross_attentions=outputs.cross_attentions, # index 4 of d outputs
encoder_last_hidden_state=outputs.encoder_last_hidden_state, # index 0 of encoder outputs
encoder_hidden_states=outputs.encoder_hidden_states, # 1 of e out
encoder_attentions=outputs.encoder_attentions, # 2 of e out
)
def serving_output(self, output):
pkv = tf.tuple(output.past_key_values)[1] if self.config.use_cache else None
dec_hs = tf.convert_to_tensor(output.decoder_hidden_states) if self.config.output_hidden_states else None
dec_attns = tf.convert_to_tensor(output.decoder_attentions) if self.config.output_attentions else None
cross_attns = tf.convert_to_tensor(output.cross_attentions) if self.config.output_attentions else None
enc_hs = tf.convert_to_tensor(output.encoder_hidden_states) if self.config.output_hidden_states else None
enc_attns = tf.convert_to_tensor(output.encoder_attentions) if self.config.output_attentions else None
return TFSeq2SeqLMOutput(
logits=output.logits,
past_key_values=pkv,
decoder_hidden_states=dec_hs,
decoder_attentions=dec_attns,
cross_attentions=cross_attns,
encoder_last_hidden_state=output.encoder_last_hidden_state,
encoder_hidden_states=enc_hs,
encoder_attentions=enc_attns,
)
def prepare_inputs_for_generation(
self,
decoder_input_ids,
past_key_values=None,
attention_mask=None,
decoder_attention_mask=None,
head_mask=None,
decoder_head_mask=None,
cross_attn_head_mask=None,
use_cache=None,
encoder_outputs=None,
**kwargs,
):
# cut decoder_input_ids if past_key_values is used
if past_key_values is not None:
decoder_input_ids = decoder_input_ids[:, -1:]
if decoder_attention_mask is not None: # xla
decoder_position_ids = tf.math.cumsum(decoder_attention_mask, axis=-1, exclusive=True)[:, -1:]
elif past_key_values is not None: # no xla + past_key_values
decoder_position_ids = past_key_values[0][0].shape[2]
else: # no xla + no past_key_values
decoder_position_ids = tf.range(decoder_input_ids.shape[1])
return {
"input_ids": None, # encoder_outputs is defined. input_ids not needed
"encoder_outputs": encoder_outputs,
"past_key_values": past_key_values,
"decoder_input_ids": decoder_input_ids,
"attention_mask": attention_mask,
"decoder_attention_mask": decoder_attention_mask,
"decoder_position_ids": decoder_position_ids,
"head_mask": head_mask,
"decoder_head_mask": decoder_head_mask,
"cross_attn_head_mask": cross_attn_head_mask,
"use_cache": use_cache, # change this to avoid caching (presumably for debugging)
}
def prepare_decoder_input_ids_from_labels(self, labels: tf.Tensor):
return shift_tokens_right(labels, self.config.pad_token_id, self.config.decoder_start_token_id)
@add_start_docstrings(
"""
Bart model with a sequence classification/head on top (a linear layer on top of the pooled output) e.g. for GLUE
tasks.
""",
BART_START_DOCSTRING,
)
class TFBartForSequenceClassification(TFBartPretrainedModel, TFSequenceClassificationLoss):
def __init__(self, config: BartConfig, load_weight_prefix=None, *inputs, **kwargs):
super().__init__(config, *inputs, **kwargs)
self.model = TFBartMainLayer(config, load_weight_prefix=load_weight_prefix, name="model")
self.classification_head = TFBartClassificationHead(
config.d_model, config.num_labels, config.classifier_dropout, name="classification_head"
)
@add_start_docstrings_to_model_forward(BART_INPUTS_DOCSTRING)
@replace_return_docstrings(output_type=TFSeq2SeqSequenceClassifierOutput, config_class=_CONFIG_FOR_DOC)
@unpack_inputs
def call(
self,
input_ids: TFModelInputType | None = None,
attention_mask: np.ndarray | tf.Tensor | None = None,
decoder_input_ids: np.ndarray | tf.Tensor | None = None,
decoder_attention_mask: np.ndarray | tf.Tensor | None = None,
decoder_position_ids: np.ndarray | tf.Tensor | None = None,
head_mask: np.ndarray | tf.Tensor | None = None,
decoder_head_mask: np.ndarray | tf.Tensor | None = None,
cross_attn_head_mask: np.ndarray | tf.Tensor | None = None,
encoder_outputs: Optional[TFBaseModelOutput] = None,
past_key_values: Optional[Tuple[Tuple[Union[np.ndarray, tf.Tensor]]]] = None,
inputs_embeds: np.ndarray | tf.Tensor | None = None,
decoder_inputs_embeds: np.ndarray | tf.Tensor | None = None,
use_cache: Optional[bool] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
labels: tf.Tensor | None = None,
training: Optional[bool] = False,
) -> Union[TFSeq2SeqSequenceClassifierOutput, Tuple[tf.Tensor]]:
r"""
labels (`tf.Tensor` of shape `(batch_size, sequence_length)`, *optional*):
Labels for computing the sequence classification/regression loss. Indices should be in `[0, ...,
config.num_labels - 1]`. If `config.num_labels > 1` a classification loss is computed (Cross-Entropy).
Returns:
"""
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
if labels is not None:
use_cache = False
if input_ids is None and inputs_embeds is not None:
raise NotImplementedError(
f"Passing input embeddings is currently not supported for {self.__class__.__name__}"
)
outputs = self.model(
input_ids=input_ids,
attention_mask=attention_mask,
decoder_input_ids=decoder_input_ids,
decoder_attention_mask=decoder_attention_mask,
decoder_position_ids=decoder_position_ids,
head_mask=head_mask,
decoder_head_mask=decoder_head_mask,
cross_attn_head_mask=cross_attn_head_mask,
encoder_outputs=encoder_outputs,
past_key_values=past_key_values,
inputs_embeds=inputs_embeds,
decoder_inputs_embeds=decoder_inputs_embeds,
use_cache=use_cache,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
training=training,
)
last_hidden_state = outputs[0]
eos_mask = tf.equal(input_ids, self.config.eos_token_id)
# out the rows with False where present. Then verify all the final
# entries are True
self_masked = tf.reshape(tf.boolean_mask(eos_mask, eos_mask), (tf.shape(input_ids)[0], -1))
tf.Assert(tf.reduce_all(self_masked[:, -1]), ["All examples must have the same number of <eos> tokens."])
masked = tf.reshape(
tf.boolean_mask(last_hidden_state, eos_mask),
(tf.shape(input_ids)[0], tf.shape(self_masked)[1], tf.shape(last_hidden_state)[-1]),
)
sentence_representation = masked[:, -1, :]
logits = self.classification_head(sentence_representation)
loss = None if labels is None else self.hf_compute_loss(labels=labels, logits=logits)
if not return_dict:
output = (logits,) + outputs[1:]
return ((loss,) + output) if loss is not None else output
return TFSeq2SeqSequenceClassifierOutput(
loss=loss,
logits=logits,
past_key_values=outputs.past_key_values,
decoder_hidden_states=outputs.decoder_hidden_states,
decoder_attentions=outputs.decoder_attentions,
cross_attentions=outputs.cross_attentions,
encoder_last_hidden_state=outputs.encoder_last_hidden_state,
encoder_hidden_states=outputs.encoder_hidden_states,
encoder_attentions=outputs.encoder_attentions,
)
def serving_output(self, output):
logits = tf.convert_to_tensor(output.logits)
pkv = tf.tuple(output.past_key_values)[1] if self.config.use_cache else None
dec_hs = tf.convert_to_tensor(output.decoder_hidden_states) if self.config.output_hidden_states else None
dec_attns = tf.convert_to_tensor(output.decoder_attentions) if self.config.output_attentions else None
cross_attns = tf.convert_to_tensor(output.cross_attentions) if self.config.output_attentions else None
enc_hs = tf.convert_to_tensor(output.encoder_hidden_states) if self.config.output_hidden_states else None
enc_attns = tf.convert_to_tensor(output.encoder_attentions) if self.config.output_attentions else None
return TFSeq2SeqSequenceClassifierOutput(
logits=logits,
past_key_values=pkv,
decoder_hidden_states=dec_hs,
decoder_attentions=dec_attns,
cross_attentions=cross_attns,
encoder_last_hidden_state=output.encoder_last_hidden_state,
encoder_hidden_states=enc_hs,
encoder_attentions=enc_attns,
)
| 74,717 | 46.773657 | 221 | py |
transformers | transformers-main/src/transformers/models/bart/convert_bart_original_pytorch_checkpoint_to_pytorch.py | # coding=utf-8
# Copyright 2020 The HuggingFace Inc. team.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
"""Convert BART checkpoint."""
import argparse
import os
from pathlib import Path
import fairseq
import torch
from packaging import version
from torch import nn
from transformers import (
BartConfig,
BartForConditionalGeneration,
BartForSequenceClassification,
BartModel,
BartTokenizer,
)
from transformers.utils import logging
FAIRSEQ_MODELS = ["bart.large", "bart.large.mnli", "bart.large.cnn", "bart_xsum/model.pt"]
extra_arch = {"bart.large": BartModel, "bart.large.mnli": BartForSequenceClassification}
if version.parse(fairseq.__version__) < version.parse("0.9.0"):
raise Exception("requires fairseq >= 0.9.0")
logging.set_verbosity_info()
logger = logging.get_logger(__name__)
SAMPLE_TEXT = " Hello world! cécé herlolip"
mnli_rename_keys = [
("model.classification_heads.mnli.dense.weight", "classification_head.dense.weight"),
("model.classification_heads.mnli.dense.bias", "classification_head.dense.bias"),
("model.classification_heads.mnli.out_proj.weight", "classification_head.out_proj.weight"),
("model.classification_heads.mnli.out_proj.bias", "classification_head.out_proj.bias"),
]
def remove_ignore_keys_(state_dict):
ignore_keys = [
"encoder.version",
"decoder.version",
"model.encoder.version",
"model.decoder.version",
"_float_tensor",
]
for k in ignore_keys:
state_dict.pop(k, None)
def rename_key(dct, old, new):
val = dct.pop(old)
dct[new] = val
def load_xsum_checkpoint(checkpoint_path):
"""Checkpoint path should end in model.pt"""
sd = torch.load(checkpoint_path, map_location="cpu")
hub_interface = torch.hub.load("pytorch/fairseq", "bart.large.cnn").eval()
hub_interface.model.load_state_dict(sd["model"])
return hub_interface
def make_linear_from_emb(emb):
vocab_size, emb_size = emb.weight.shape
lin_layer = nn.Linear(vocab_size, emb_size, bias=False)
lin_layer.weight.data = emb.weight.data
return lin_layer
@torch.no_grad()
def convert_bart_checkpoint(checkpoint_path, pytorch_dump_folder_path, hf_checkpoint_name=None):
"""
Copy/paste/tweak model's weights to our BERT structure.
"""
if not os.path.exists(checkpoint_path):
bart = torch.hub.load("pytorch/fairseq", checkpoint_path).eval()
else:
bart = load_xsum_checkpoint(checkpoint_path)
bart.model.upgrade_state_dict(bart.model.state_dict())
if hf_checkpoint_name is None:
hf_checkpoint_name = checkpoint_path.replace(".", "-")
config = BartConfig.from_pretrained(hf_checkpoint_name)
tokens = bart.encode(SAMPLE_TEXT).unsqueeze(0)
tokens2 = BartTokenizer.from_pretrained(hf_checkpoint_name).encode(SAMPLE_TEXT, return_tensors="pt").unsqueeze(0)
if not torch.eq(tokens, tokens2).all():
raise ValueError(
f"converted tokenizer and pretrained tokenizer returned different output: {tokens} != {tokens2}"
)
if checkpoint_path == "bart.large.mnli":
state_dict = bart.state_dict()
remove_ignore_keys_(state_dict)
state_dict["model.shared.weight"] = state_dict["model.decoder.embed_tokens.weight"]
for src, dest in mnli_rename_keys:
rename_key(state_dict, src, dest)
model = BartForSequenceClassification(config).eval()
model.load_state_dict(state_dict)
fairseq_output = bart.predict("mnli", tokens, return_logits=True)
new_model_outputs = model(tokens)[0] # logits
else: # no classification heads to worry about
state_dict = bart.model.state_dict()
remove_ignore_keys_(state_dict)
state_dict["shared.weight"] = state_dict["decoder.embed_tokens.weight"]
fairseq_output = bart.extract_features(tokens)
if hf_checkpoint_name == "facebook/bart-large":
model = BartModel(config).eval()
model.load_state_dict(state_dict)
new_model_outputs = model(tokens).model[0]
else:
model = BartForConditionalGeneration(config).eval() # an existing summarization ckpt
model.model.load_state_dict(state_dict)
if hasattr(model, "lm_head"):
model.lm_head = make_linear_from_emb(model.model.shared)
new_model_outputs = model.model(tokens)[0]
# Check results
if fairseq_output.shape != new_model_outputs.shape:
raise ValueError(
f"`fairseq_output` shape and `new_model_output` shape are different: {fairseq_output.shape=}, {new_model_outputs.shape}"
)
if (fairseq_output != new_model_outputs).any().item():
raise ValueError("Some values in `fairseq_output` are different from `new_model_outputs`")
Path(pytorch_dump_folder_path).mkdir(exist_ok=True)
model.save_pretrained(pytorch_dump_folder_path)
if __name__ == "__main__":
parser = argparse.ArgumentParser()
# Required parameters
parser.add_argument(
"fairseq_path", type=str, help="bart.large, bart.large.cnn or a path to a model.pt on local filesystem."
)
parser.add_argument("pytorch_dump_folder_path", default=None, type=str, help="Path to the output PyTorch model.")
parser.add_argument(
"--hf_config", default=None, type=str, help="Which huggingface architecture to use: bart-large-xsum"
)
args = parser.parse_args()
convert_bart_checkpoint(args.fairseq_path, args.pytorch_dump_folder_path, hf_checkpoint_name=args.hf_config)
| 6,053 | 37.316456 | 132 | py |
transformers | transformers-main/src/transformers/models/bart/configuration_bart.py | # coding=utf-8
# Copyright 2021 The Fairseq Authors and The HuggingFace Inc. team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
""" BART model configuration"""
import warnings
from collections import OrderedDict
from typing import Any, Mapping, Optional
from ... import PreTrainedTokenizer
from ...configuration_utils import PretrainedConfig
from ...onnx import OnnxConfig, OnnxConfigWithPast, OnnxSeq2SeqConfigWithPast
from ...onnx.utils import compute_effective_axis_dimension
from ...utils import TensorType, is_torch_available, logging
logger = logging.get_logger(__name__)
BART_PRETRAINED_CONFIG_ARCHIVE_MAP = {
"facebook/bart-large": "https://huggingface.co/facebook/bart-large/resolve/main/config.json",
# See all BART models at https://huggingface.co/models?filter=bart
}
class BartConfig(PretrainedConfig):
r"""
This is the configuration class to store the configuration of a [`BartModel`]. It is used to instantiate a BART
model according to the specified arguments, defining the model architecture. Instantiating a configuration with the
defaults will yield a similar configuration to that of the BART
[facebook/bart-large](https://huggingface.co/facebook/bart-large) architecture.
Configuration objects inherit from [`PretrainedConfig`] and can be used to control the model outputs. Read the
documentation from [`PretrainedConfig`] for more information.
Args:
vocab_size (`int`, *optional*, defaults to 50265):
Vocabulary size of the BART model. Defines the number of different tokens that can be represented by the
`inputs_ids` passed when calling [`BartModel`] or [`TFBartModel`].
d_model (`int`, *optional*, defaults to 1024):
Dimensionality of the layers and the pooler layer.
encoder_layers (`int`, *optional*, defaults to 12):
Number of encoder layers.
decoder_layers (`int`, *optional*, defaults to 12):
Number of decoder layers.
encoder_attention_heads (`int`, *optional*, defaults to 16):
Number of attention heads for each attention layer in the Transformer encoder.
decoder_attention_heads (`int`, *optional*, defaults to 16):
Number of attention heads for each attention layer in the Transformer decoder.
decoder_ffn_dim (`int`, *optional*, defaults to 4096):
Dimensionality of the "intermediate" (often named feed-forward) layer in decoder.
encoder_ffn_dim (`int`, *optional*, defaults to 4096):
Dimensionality of the "intermediate" (often named feed-forward) layer in decoder.
activation_function (`str` or `function`, *optional*, defaults to `"gelu"`):
The non-linear activation function (function or string) in the encoder and pooler. If string, `"gelu"`,
`"relu"`, `"silu"` and `"gelu_new"` are supported.
dropout (`float`, *optional*, defaults to 0.1):
The dropout probability for all fully connected layers in the embeddings, encoder, and pooler.
attention_dropout (`float`, *optional*, defaults to 0.0):
The dropout ratio for the attention probabilities.
activation_dropout (`float`, *optional*, defaults to 0.0):
The dropout ratio for activations inside the fully connected layer.
classifier_dropout (`float`, *optional*, defaults to 0.0):
The dropout ratio for classifier.
max_position_embeddings (`int`, *optional*, defaults to 1024):
The maximum sequence length that this model might ever be used with. Typically set this to something large
just in case (e.g., 512 or 1024 or 2048).
init_std (`float`, *optional*, defaults to 0.02):
The standard deviation of the truncated_normal_initializer for initializing all weight matrices.
encoder_layerdrop (`float`, *optional*, defaults to 0.0):
The LayerDrop probability for the encoder. See the [LayerDrop paper](see https://arxiv.org/abs/1909.11556)
for more details.
decoder_layerdrop (`float`, *optional*, defaults to 0.0):
The LayerDrop probability for the decoder. See the [LayerDrop paper](see https://arxiv.org/abs/1909.11556)
for more details.
scale_embedding (`bool`, *optional*, defaults to `False`):
Scale embeddings by diving by sqrt(d_model).
use_cache (`bool`, *optional*, defaults to `True`):
Whether or not the model should return the last key/values attentions (not used by all models).
num_labels (`int`, *optional*, defaults to 3):
The number of labels to use in [`BartForSequenceClassification`].
forced_eos_token_id (`int`, *optional*, defaults to 2):
The id of the token to force as the last generated token when `max_length` is reached. Usually set to
`eos_token_id`.
Example:
```python
>>> from transformers import BartConfig, BartModel
>>> # Initializing a BART facebook/bart-large style configuration
>>> configuration = BartConfig()
>>> # Initializing a model (with random weights) from the facebook/bart-large style configuration
>>> model = BartModel(configuration)
>>> # Accessing the model configuration
>>> configuration = model.config
```"""
model_type = "bart"
keys_to_ignore_at_inference = ["past_key_values"]
attribute_map = {"num_attention_heads": "encoder_attention_heads", "hidden_size": "d_model"}
def __init__(
self,
vocab_size=50265,
max_position_embeddings=1024,
encoder_layers=12,
encoder_ffn_dim=4096,
encoder_attention_heads=16,
decoder_layers=12,
decoder_ffn_dim=4096,
decoder_attention_heads=16,
encoder_layerdrop=0.0,
decoder_layerdrop=0.0,
activation_function="gelu",
d_model=1024,
dropout=0.1,
attention_dropout=0.0,
activation_dropout=0.0,
init_std=0.02,
classifier_dropout=0.0,
scale_embedding=False,
use_cache=True,
num_labels=3,
pad_token_id=1,
bos_token_id=0,
eos_token_id=2,
is_encoder_decoder=True,
decoder_start_token_id=2,
forced_eos_token_id=2,
**kwargs,
):
self.vocab_size = vocab_size
self.max_position_embeddings = max_position_embeddings
self.d_model = d_model
self.encoder_ffn_dim = encoder_ffn_dim
self.encoder_layers = encoder_layers
self.encoder_attention_heads = encoder_attention_heads
self.decoder_ffn_dim = decoder_ffn_dim
self.decoder_layers = decoder_layers
self.decoder_attention_heads = decoder_attention_heads
self.dropout = dropout
self.attention_dropout = attention_dropout
self.activation_dropout = activation_dropout
self.activation_function = activation_function
self.init_std = init_std
self.encoder_layerdrop = encoder_layerdrop
self.decoder_layerdrop = decoder_layerdrop
self.classifier_dropout = classifier_dropout
self.use_cache = use_cache
self.num_hidden_layers = encoder_layers
self.scale_embedding = scale_embedding # scale factor will be sqrt(d_model) if True
super().__init__(
num_labels=num_labels,
pad_token_id=pad_token_id,
bos_token_id=bos_token_id,
eos_token_id=eos_token_id,
is_encoder_decoder=is_encoder_decoder,
decoder_start_token_id=decoder_start_token_id,
forced_eos_token_id=forced_eos_token_id,
**kwargs,
)
# ensure backward compatibility for BART CNN models
if self.forced_bos_token_id is None and kwargs.get("force_bos_token_to_be_generated", False):
self.forced_bos_token_id = self.bos_token_id
warnings.warn(
f"Please make sure the config includes `forced_bos_token_id={self.bos_token_id}` in future versions. "
"The config can simply be saved and uploaded again to be fixed."
)
class BartOnnxConfig(OnnxSeq2SeqConfigWithPast):
@property
def inputs(self) -> Mapping[str, Mapping[int, str]]:
if self.task in ["default", "seq2seq-lm"]:
common_inputs = OrderedDict(
[
("input_ids", {0: "batch", 1: "encoder_sequence"}),
("attention_mask", {0: "batch", 1: "encoder_sequence"}),
]
)
if self.use_past:
common_inputs["decoder_input_ids"] = {0: "batch"}
common_inputs["decoder_attention_mask"] = {0: "batch", 1: "past_decoder_sequence + sequence"}
else:
common_inputs["decoder_input_ids"] = {0: "batch", 1: "decoder_sequence"}
common_inputs["decoder_attention_mask"] = {0: "batch", 1: "decoder_sequence"}
if self.use_past:
self.fill_with_past_key_values_(common_inputs, direction="inputs")
elif self.task == "causal-lm":
# TODO: figure this case out.
common_inputs = OrderedDict(
[
("input_ids", {0: "batch", 1: "encoder_sequence"}),
("attention_mask", {0: "batch", 1: "encoder_sequence"}),
]
)
if self.use_past:
num_encoder_layers, _ = self.num_layers
for i in range(num_encoder_layers):
common_inputs[f"past_key_values.{i}.key"] = {0: "batch", 2: "past_sequence + sequence"}
common_inputs[f"past_key_values.{i}.value"] = {0: "batch", 2: "past_sequence + sequence"}
else:
common_inputs = OrderedDict(
[
("input_ids", {0: "batch", 1: "encoder_sequence"}),
("attention_mask", {0: "batch", 1: "encoder_sequence"}),
("decoder_input_ids", {0: "batch", 1: "decoder_sequence"}),
("decoder_attention_mask", {0: "batch", 1: "decoder_sequence"}),
]
)
return common_inputs
@property
def outputs(self) -> Mapping[str, Mapping[int, str]]:
if self.task in ["default", "seq2seq-lm"]:
common_outputs = super().outputs
else:
common_outputs = super(OnnxConfigWithPast, self).outputs
if self.use_past:
num_encoder_layers, _ = self.num_layers
for i in range(num_encoder_layers):
common_outputs[f"present.{i}.key"] = {0: "batch", 2: "past_sequence + sequence"}
common_outputs[f"present.{i}.value"] = {0: "batch", 2: "past_sequence + sequence"}
return common_outputs
def _generate_dummy_inputs_for_default_and_seq2seq_lm(
self,
tokenizer: PreTrainedTokenizer,
batch_size: int = -1,
seq_length: int = -1,
is_pair: bool = False,
framework: Optional[TensorType] = None,
) -> Mapping[str, Any]:
encoder_inputs = self._generate_dummy_inputs_for_sequence_classification_and_question_answering(
tokenizer, batch_size, seq_length, is_pair, framework
)
# Generate decoder inputs
decoder_seq_length = seq_length if not self.use_past else 1
decoder_inputs = self._generate_dummy_inputs_for_sequence_classification_and_question_answering(
tokenizer, batch_size, decoder_seq_length, is_pair, framework
)
decoder_inputs = {f"decoder_{name}": tensor for name, tensor in decoder_inputs.items()}
common_inputs = dict(**encoder_inputs, **decoder_inputs)
if self.use_past:
if not is_torch_available():
raise ValueError("Cannot generate dummy past_keys inputs without PyTorch installed.")
else:
import torch
batch, encoder_seq_length = common_inputs["input_ids"].shape
decoder_seq_length = common_inputs["decoder_input_ids"].shape[1]
num_encoder_attention_heads, num_decoder_attention_heads = self.num_attention_heads
encoder_shape = (
batch,
num_encoder_attention_heads,
encoder_seq_length,
self._config.hidden_size // num_encoder_attention_heads,
)
decoder_past_length = decoder_seq_length + 3
decoder_shape = (
batch,
num_decoder_attention_heads,
decoder_past_length,
self._config.hidden_size // num_decoder_attention_heads,
)
common_inputs["decoder_attention_mask"] = torch.cat(
[common_inputs["decoder_attention_mask"], torch.ones(batch, decoder_past_length)], dim=1
)
common_inputs["past_key_values"] = []
# If the number of encoder and decoder layers are present in the model configuration, both are considered
num_encoder_layers, num_decoder_layers = self.num_layers
min_num_layers = min(num_encoder_layers, num_decoder_layers)
max_num_layers = max(num_encoder_layers, num_decoder_layers) - min_num_layers
remaining_side_name = "encoder" if num_encoder_layers > num_decoder_layers else "decoder"
for _ in range(min_num_layers):
common_inputs["past_key_values"].append(
(
torch.zeros(decoder_shape),
torch.zeros(decoder_shape),
torch.zeros(encoder_shape),
torch.zeros(encoder_shape),
)
)
# TODO: test this.
shape = encoder_shape if remaining_side_name == "encoder" else decoder_shape
for _ in range(min_num_layers, max_num_layers):
common_inputs["past_key_values"].append((torch.zeros(shape), torch.zeros(shape)))
return common_inputs
def _generate_dummy_inputs_for_causal_lm(
self,
tokenizer: PreTrainedTokenizer,
batch_size: int = -1,
seq_length: int = -1,
is_pair: bool = False,
framework: Optional[TensorType] = None,
) -> Mapping[str, Any]:
common_inputs = self._generate_dummy_inputs_for_sequence_classification_and_question_answering(
tokenizer, batch_size, seq_length, is_pair, framework
)
if self.use_past:
if not is_torch_available():
raise ValueError("Cannot generate dummy past_keys inputs without PyTorch installed.")
else:
import torch
batch, seqlen = common_inputs["input_ids"].shape
# Not using the same length for past_key_values
past_key_values_length = seqlen + 2
num_encoder_layers, _ = self.num_layers
num_encoder_attention_heads, _ = self.num_attention_heads
past_shape = (
batch,
num_encoder_attention_heads,
past_key_values_length,
self._config.hidden_size // num_encoder_attention_heads,
)
mask_dtype = common_inputs["attention_mask"].dtype
common_inputs["attention_mask"] = torch.cat(
[common_inputs["attention_mask"], torch.ones(batch, past_key_values_length, dtype=mask_dtype)], dim=1
)
common_inputs["past_key_values"] = [
(torch.zeros(past_shape), torch.zeros(past_shape)) for _ in range(num_encoder_layers)
]
return common_inputs
def _generate_dummy_inputs_for_sequence_classification_and_question_answering(
self,
tokenizer: PreTrainedTokenizer,
batch_size: int = -1,
seq_length: int = -1,
is_pair: bool = False,
framework: Optional[TensorType] = None,
) -> Mapping[str, Any]:
# Copied from OnnxConfig.generate_dummy_inputs
# Did not use super(OnnxConfigWithPast, self).generate_dummy_inputs for code clarity.
# If dynamic axis (-1) we forward with a fixed dimension of 2 samples to avoid optimizations made by ONNX
batch_size = compute_effective_axis_dimension(
batch_size, fixed_dimension=OnnxConfig.default_fixed_batch, num_token_to_add=0
)
# If dynamic axis (-1) we forward with a fixed dimension of 8 tokens to avoid optimizations made by ONNX
token_to_add = tokenizer.num_special_tokens_to_add(is_pair)
seq_length = compute_effective_axis_dimension(
seq_length, fixed_dimension=OnnxConfig.default_fixed_sequence, num_token_to_add=token_to_add
)
# Generate dummy inputs according to compute batch and sequence
dummy_input = [" ".join([tokenizer.unk_token]) * seq_length] * batch_size
common_inputs = dict(tokenizer(dummy_input, return_tensors=framework))
return common_inputs
def generate_dummy_inputs(
self,
tokenizer: PreTrainedTokenizer,
batch_size: int = -1,
seq_length: int = -1,
is_pair: bool = False,
framework: Optional[TensorType] = None,
) -> Mapping[str, Any]:
if self.task in ["default", "seq2seq-lm"]:
common_inputs = self._generate_dummy_inputs_for_default_and_seq2seq_lm(
tokenizer, batch_size=batch_size, seq_length=seq_length, is_pair=is_pair, framework=framework
)
elif self.task == "causal-lm":
common_inputs = self._generate_dummy_inputs_for_causal_lm(
tokenizer, batch_size=batch_size, seq_length=seq_length, is_pair=is_pair, framework=framework
)
else:
common_inputs = self._generate_dummy_inputs_for_sequence_classification_and_question_answering(
tokenizer, batch_size=batch_size, seq_length=seq_length, is_pair=is_pair, framework=framework
)
return common_inputs
def _flatten_past_key_values_(self, flattened_output, name, idx, t):
if self.task in ["default", "seq2seq-lm"]:
flattened_output = super()._flatten_past_key_values_(flattened_output, name, idx, t)
else:
flattened_output = super(OnnxSeq2SeqConfigWithPast, self)._flatten_past_key_values_(
flattened_output, name, idx, t
)
| 18,993 | 45.783251 | 119 | py |
transformers | transformers-main/src/transformers/models/bart/modeling_bart.py | # coding=utf-8
# Copyright 2021 The Fairseq Authors and The HuggingFace Inc. team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
""" PyTorch BART model."""
import copy
import math
import warnings
from typing import List, Optional, Tuple, Union
import torch
import torch.utils.checkpoint
from torch import nn
from torch.nn import BCEWithLogitsLoss, CrossEntropyLoss, MSELoss
from ...activations import ACT2FN
from ...modeling_outputs import (
BaseModelOutput,
BaseModelOutputWithPastAndCrossAttentions,
CausalLMOutputWithCrossAttentions,
Seq2SeqLMOutput,
Seq2SeqModelOutput,
Seq2SeqQuestionAnsweringModelOutput,
Seq2SeqSequenceClassifierOutput,
)
from ...modeling_utils import PreTrainedModel
from ...utils import (
add_code_sample_docstrings,
add_end_docstrings,
add_start_docstrings,
add_start_docstrings_to_model_forward,
logging,
replace_return_docstrings,
)
from .configuration_bart import BartConfig
logger = logging.get_logger(__name__)
_CHECKPOINT_FOR_DOC = "facebook/bart-base"
_CONFIG_FOR_DOC = "BartConfig"
# Base model docstring
_EXPECTED_OUTPUT_SHAPE = [1, 8, 768]
# SequenceClassification docstring
_CHECKPOINT_FOR_SEQUENCE_CLASSIFICATION = "valhalla/bart-large-sst2"
_SEQ_CLASS_EXPECTED_LOSS = 0.0
_SEQ_CLASS_EXPECTED_OUTPUT = "'POSITIVE'"
# QuestionAsnwering docstring
_CHECKPOINT_FOR_QA = "valhalla/bart-large-finetuned-squadv1"
_QA_EXPECTED_LOSS = 0.59
_QA_EXPECTED_OUTPUT = "' nice puppet'"
BART_PRETRAINED_MODEL_ARCHIVE_LIST = [
"facebook/bart-large",
# see all BART models at https://huggingface.co/models?filter=bart
]
def shift_tokens_right(input_ids: torch.Tensor, pad_token_id: int, decoder_start_token_id: int):
"""
Shift input ids one token to the right.
"""
shifted_input_ids = input_ids.new_zeros(input_ids.shape)
shifted_input_ids[:, 1:] = input_ids[:, :-1].clone()
shifted_input_ids[:, 0] = decoder_start_token_id
if pad_token_id is None:
raise ValueError("self.model.config.pad_token_id has to be defined.")
# replace possible -100 values in labels by `pad_token_id`
shifted_input_ids.masked_fill_(shifted_input_ids == -100, pad_token_id)
return shifted_input_ids
def _make_causal_mask(
input_ids_shape: torch.Size, dtype: torch.dtype, device: torch.device, past_key_values_length: int = 0
):
"""
Make causal mask used for bi-directional self-attention.
"""
bsz, tgt_len = input_ids_shape
mask = torch.full((tgt_len, tgt_len), torch.finfo(dtype).min, device=device)
mask_cond = torch.arange(mask.size(-1), device=device)
mask.masked_fill_(mask_cond < (mask_cond + 1).view(mask.size(-1), 1), 0)
mask = mask.to(dtype)
if past_key_values_length > 0:
mask = torch.cat([torch.zeros(tgt_len, past_key_values_length, dtype=dtype, device=device), mask], dim=-1)
return mask[None, None, :, :].expand(bsz, 1, tgt_len, tgt_len + past_key_values_length)
def _expand_mask(mask: torch.Tensor, dtype: torch.dtype, tgt_len: Optional[int] = None):
"""
Expands attention_mask from `[bsz, seq_len]` to `[bsz, 1, tgt_seq_len, src_seq_len]`.
"""
bsz, src_len = mask.size()
tgt_len = tgt_len if tgt_len is not None else src_len
expanded_mask = mask[:, None, None, :].expand(bsz, 1, tgt_len, src_len).to(dtype)
inverted_mask = 1.0 - expanded_mask
return inverted_mask.masked_fill(inverted_mask.to(torch.bool), torch.finfo(dtype).min)
class BartLearnedPositionalEmbedding(nn.Embedding):
"""
This module learns positional embeddings up to a fixed maximum size.
"""
def __init__(self, num_embeddings: int, embedding_dim: int):
# Bart is set up so that if padding_idx is specified then offset the embedding ids by 2
# and adjust num_embeddings appropriately. Other models don't have this hack
self.offset = 2
super().__init__(num_embeddings + self.offset, embedding_dim)
def forward(self, input_ids: torch.Tensor, past_key_values_length: int = 0):
"""`input_ids' shape is expected to be [bsz x seqlen]."""
bsz, seq_len = input_ids.shape[:2]
positions = torch.arange(
past_key_values_length, past_key_values_length + seq_len, dtype=torch.long, device=self.weight.device
).expand(bsz, -1)
return super().forward(positions + self.offset)
class BartAttention(nn.Module):
"""Multi-headed attention from 'Attention Is All You Need' paper"""
def __init__(
self,
embed_dim: int,
num_heads: int,
dropout: float = 0.0,
is_decoder: bool = False,
bias: bool = True,
):
super().__init__()
self.embed_dim = embed_dim
self.num_heads = num_heads
self.dropout = dropout
self.head_dim = embed_dim // num_heads
if (self.head_dim * num_heads) != self.embed_dim:
raise ValueError(
f"embed_dim must be divisible by num_heads (got `embed_dim`: {self.embed_dim}"
f" and `num_heads`: {num_heads})."
)
self.scaling = self.head_dim**-0.5
self.is_decoder = is_decoder
self.k_proj = nn.Linear(embed_dim, embed_dim, bias=bias)
self.v_proj = nn.Linear(embed_dim, embed_dim, bias=bias)
self.q_proj = nn.Linear(embed_dim, embed_dim, bias=bias)
self.out_proj = nn.Linear(embed_dim, embed_dim, bias=bias)
def _shape(self, tensor: torch.Tensor, seq_len: int, bsz: int):
return tensor.view(bsz, seq_len, self.num_heads, self.head_dim).transpose(1, 2).contiguous()
def forward(
self,
hidden_states: torch.Tensor,
key_value_states: Optional[torch.Tensor] = None,
past_key_value: Optional[Tuple[torch.Tensor]] = None,
attention_mask: Optional[torch.Tensor] = None,
layer_head_mask: Optional[torch.Tensor] = None,
output_attentions: bool = False,
) -> Tuple[torch.Tensor, Optional[torch.Tensor], Optional[Tuple[torch.Tensor]]]:
"""Input shape: Batch x Time x Channel"""
# if key_value_states are provided this layer is used as a cross-attention layer
# for the decoder
is_cross_attention = key_value_states is not None
bsz, tgt_len, _ = hidden_states.size()
# get query proj
query_states = self.q_proj(hidden_states) * self.scaling
# get key, value proj
# `past_key_value[0].shape[2] == key_value_states.shape[1]`
# is checking that the `sequence_length` of the `past_key_value` is the same as
# the provided `key_value_states` to support prefix tuning
if (
is_cross_attention
and past_key_value is not None
and past_key_value[0].shape[2] == key_value_states.shape[1]
):
# reuse k,v, cross_attentions
key_states = past_key_value[0]
value_states = past_key_value[1]
elif is_cross_attention:
# cross_attentions
key_states = self._shape(self.k_proj(key_value_states), -1, bsz)
value_states = self._shape(self.v_proj(key_value_states), -1, bsz)
elif past_key_value is not None:
# reuse k, v, self_attention
key_states = self._shape(self.k_proj(hidden_states), -1, bsz)
value_states = self._shape(self.v_proj(hidden_states), -1, bsz)
key_states = torch.cat([past_key_value[0], key_states], dim=2)
value_states = torch.cat([past_key_value[1], value_states], dim=2)
else:
# self_attention
key_states = self._shape(self.k_proj(hidden_states), -1, bsz)
value_states = self._shape(self.v_proj(hidden_states), -1, bsz)
if self.is_decoder:
# if cross_attention save Tuple(torch.Tensor, torch.Tensor) of all cross attention key/value_states.
# Further calls to cross_attention layer can then reuse all cross-attention
# key/value_states (first "if" case)
# if uni-directional self-attention (decoder) save Tuple(torch.Tensor, torch.Tensor) of
# all previous decoder key/value_states. Further calls to uni-directional self-attention
# can concat previous decoder key/value_states to current projected key/value_states (third "elif" case)
# if encoder bi-directional self-attention `past_key_value` is always `None`
past_key_value = (key_states, value_states)
proj_shape = (bsz * self.num_heads, -1, self.head_dim)
query_states = self._shape(query_states, tgt_len, bsz).view(*proj_shape)
key_states = key_states.reshape(*proj_shape)
value_states = value_states.reshape(*proj_shape)
src_len = key_states.size(1)
attn_weights = torch.bmm(query_states, key_states.transpose(1, 2))
if attn_weights.size() != (bsz * self.num_heads, tgt_len, src_len):
raise ValueError(
f"Attention weights should be of size {(bsz * self.num_heads, tgt_len, src_len)}, but is"
f" {attn_weights.size()}"
)
if attention_mask is not None:
if attention_mask.size() != (bsz, 1, tgt_len, src_len):
raise ValueError(
f"Attention mask should be of size {(bsz, 1, tgt_len, src_len)}, but is {attention_mask.size()}"
)
attn_weights = attn_weights.view(bsz, self.num_heads, tgt_len, src_len) + attention_mask
attn_weights = attn_weights.view(bsz * self.num_heads, tgt_len, src_len)
attn_weights = nn.functional.softmax(attn_weights, dim=-1)
if layer_head_mask is not None:
if layer_head_mask.size() != (self.num_heads,):
raise ValueError(
f"Head mask for a single layer should be of size {(self.num_heads,)}, but is"
f" {layer_head_mask.size()}"
)
attn_weights = layer_head_mask.view(1, -1, 1, 1) * attn_weights.view(bsz, self.num_heads, tgt_len, src_len)
attn_weights = attn_weights.view(bsz * self.num_heads, tgt_len, src_len)
if output_attentions:
# this operation is a bit awkward, but it's required to
# make sure that attn_weights keeps its gradient.
# In order to do so, attn_weights have to be reshaped
# twice and have to be reused in the following
attn_weights_reshaped = attn_weights.view(bsz, self.num_heads, tgt_len, src_len)
attn_weights = attn_weights_reshaped.view(bsz * self.num_heads, tgt_len, src_len)
else:
attn_weights_reshaped = None
attn_probs = nn.functional.dropout(attn_weights, p=self.dropout, training=self.training)
attn_output = torch.bmm(attn_probs, value_states)
if attn_output.size() != (bsz * self.num_heads, tgt_len, self.head_dim):
raise ValueError(
f"`attn_output` should be of size {(bsz * self.num_heads, tgt_len, self.head_dim)}, but is"
f" {attn_output.size()}"
)
attn_output = attn_output.view(bsz, self.num_heads, tgt_len, self.head_dim)
attn_output = attn_output.transpose(1, 2)
# Use the `embed_dim` from the config (stored in the class) rather than `hidden_state` because `attn_output` can be
# partitioned across GPUs when using tensor-parallelism.
attn_output = attn_output.reshape(bsz, tgt_len, self.embed_dim)
attn_output = self.out_proj(attn_output)
return attn_output, attn_weights_reshaped, past_key_value
class BartEncoderLayer(nn.Module):
def __init__(self, config: BartConfig):
super().__init__()
self.embed_dim = config.d_model
self.self_attn = BartAttention(
embed_dim=self.embed_dim,
num_heads=config.encoder_attention_heads,
dropout=config.attention_dropout,
)
self.self_attn_layer_norm = nn.LayerNorm(self.embed_dim)
self.dropout = config.dropout
self.activation_fn = ACT2FN[config.activation_function]
self.activation_dropout = config.activation_dropout
self.fc1 = nn.Linear(self.embed_dim, config.encoder_ffn_dim)
self.fc2 = nn.Linear(config.encoder_ffn_dim, self.embed_dim)
self.final_layer_norm = nn.LayerNorm(self.embed_dim)
def forward(
self,
hidden_states: torch.FloatTensor,
attention_mask: torch.FloatTensor,
layer_head_mask: torch.FloatTensor,
output_attentions: Optional[bool] = False,
) -> Tuple[torch.FloatTensor, Optional[torch.FloatTensor]]:
"""
Args:
hidden_states (`torch.FloatTensor`): input to the layer of shape `(batch, seq_len, embed_dim)`
attention_mask (`torch.FloatTensor`): attention mask of size
`(batch, 1, tgt_len, src_len)` where padding elements are indicated by very large negative values.
layer_head_mask (`torch.FloatTensor`): mask for attention heads in a given layer of size
`(encoder_attention_heads,)`.
output_attentions (`bool`, *optional*):
Whether or not to return the attentions tensors of all attention layers. See `attentions` under
returned tensors for more detail.
"""
residual = hidden_states
hidden_states, attn_weights, _ = self.self_attn(
hidden_states=hidden_states,
attention_mask=attention_mask,
layer_head_mask=layer_head_mask,
output_attentions=output_attentions,
)
hidden_states = nn.functional.dropout(hidden_states, p=self.dropout, training=self.training)
hidden_states = residual + hidden_states
hidden_states = self.self_attn_layer_norm(hidden_states)
residual = hidden_states
hidden_states = self.activation_fn(self.fc1(hidden_states))
hidden_states = nn.functional.dropout(hidden_states, p=self.activation_dropout, training=self.training)
hidden_states = self.fc2(hidden_states)
hidden_states = nn.functional.dropout(hidden_states, p=self.dropout, training=self.training)
hidden_states = residual + hidden_states
hidden_states = self.final_layer_norm(hidden_states)
if hidden_states.dtype == torch.float16 and (
torch.isinf(hidden_states).any() or torch.isnan(hidden_states).any()
):
clamp_value = torch.finfo(hidden_states.dtype).max - 1000
hidden_states = torch.clamp(hidden_states, min=-clamp_value, max=clamp_value)
outputs = (hidden_states,)
if output_attentions:
outputs += (attn_weights,)
return outputs
class BartDecoderLayer(nn.Module):
def __init__(self, config: BartConfig):
super().__init__()
self.embed_dim = config.d_model
self.self_attn = BartAttention(
embed_dim=self.embed_dim,
num_heads=config.decoder_attention_heads,
dropout=config.attention_dropout,
is_decoder=True,
)
self.dropout = config.dropout
self.activation_fn = ACT2FN[config.activation_function]
self.activation_dropout = config.activation_dropout
self.self_attn_layer_norm = nn.LayerNorm(self.embed_dim)
self.encoder_attn = BartAttention(
self.embed_dim,
config.decoder_attention_heads,
dropout=config.attention_dropout,
is_decoder=True,
)
self.encoder_attn_layer_norm = nn.LayerNorm(self.embed_dim)
self.fc1 = nn.Linear(self.embed_dim, config.decoder_ffn_dim)
self.fc2 = nn.Linear(config.decoder_ffn_dim, self.embed_dim)
self.final_layer_norm = nn.LayerNorm(self.embed_dim)
def forward(
self,
hidden_states: torch.Tensor,
attention_mask: Optional[torch.Tensor] = None,
encoder_hidden_states: Optional[torch.Tensor] = None,
encoder_attention_mask: Optional[torch.Tensor] = None,
layer_head_mask: Optional[torch.Tensor] = None,
cross_attn_layer_head_mask: Optional[torch.Tensor] = None,
past_key_value: Optional[Tuple[torch.Tensor]] = None,
output_attentions: Optional[bool] = False,
use_cache: Optional[bool] = True,
) -> Tuple[torch.FloatTensor, Optional[Tuple[torch.FloatTensor, torch.FloatTensor]]]:
"""
Args:
hidden_states (`torch.FloatTensor`): input to the layer of shape `(batch, seq_len, embed_dim)`
attention_mask (`torch.FloatTensor`): attention mask of size
`(batch, 1, tgt_len, src_len)` where padding elements are indicated by very large negative values.
encoder_hidden_states (`torch.FloatTensor`):
cross attention input to the layer of shape `(batch, seq_len, embed_dim)`
encoder_attention_mask (`torch.FloatTensor`): encoder attention mask of size
`(batch, 1, tgt_len, src_len)` where padding elements are indicated by very large negative values.
layer_head_mask (`torch.FloatTensor`): mask for attention heads in a given layer of size
`(encoder_attention_heads,)`.
cross_attn_layer_head_mask (`torch.FloatTensor`): mask for cross-attention heads in a given layer of
size `(decoder_attention_heads,)`.
past_key_value (`Tuple(torch.FloatTensor)`): cached past key and value projection states
output_attentions (`bool`, *optional*):
Whether or not to return the attentions tensors of all attention layers. See `attentions` under
returned tensors for more detail.
"""
residual = hidden_states
# Self Attention
# decoder uni-directional self-attention cached key/values tuple is at positions 1,2
self_attn_past_key_value = past_key_value[:2] if past_key_value is not None else None
# add present self-attn cache to positions 1,2 of present_key_value tuple
hidden_states, self_attn_weights, present_key_value = self.self_attn(
hidden_states=hidden_states,
past_key_value=self_attn_past_key_value,
attention_mask=attention_mask,
layer_head_mask=layer_head_mask,
output_attentions=output_attentions,
)
hidden_states = nn.functional.dropout(hidden_states, p=self.dropout, training=self.training)
hidden_states = residual + hidden_states
hidden_states = self.self_attn_layer_norm(hidden_states)
# Cross-Attention Block
cross_attn_present_key_value = None
cross_attn_weights = None
if encoder_hidden_states is not None:
residual = hidden_states
# cross_attn cached key/values tuple is at positions 3,4 of present_key_value tuple
cross_attn_past_key_value = past_key_value[-2:] if past_key_value is not None else None
hidden_states, cross_attn_weights, cross_attn_present_key_value = self.encoder_attn(
hidden_states=hidden_states,
key_value_states=encoder_hidden_states,
attention_mask=encoder_attention_mask,
layer_head_mask=cross_attn_layer_head_mask,
past_key_value=cross_attn_past_key_value,
output_attentions=output_attentions,
)
hidden_states = nn.functional.dropout(hidden_states, p=self.dropout, training=self.training)
hidden_states = residual + hidden_states
hidden_states = self.encoder_attn_layer_norm(hidden_states)
# add cross-attn to positions 3,4 of present_key_value tuple
present_key_value = present_key_value + cross_attn_present_key_value
# Fully Connected
residual = hidden_states
hidden_states = self.activation_fn(self.fc1(hidden_states))
hidden_states = nn.functional.dropout(hidden_states, p=self.activation_dropout, training=self.training)
hidden_states = self.fc2(hidden_states)
hidden_states = nn.functional.dropout(hidden_states, p=self.dropout, training=self.training)
hidden_states = residual + hidden_states
hidden_states = self.final_layer_norm(hidden_states)
outputs = (hidden_states,)
if output_attentions:
outputs += (self_attn_weights, cross_attn_weights)
if use_cache:
outputs += (present_key_value,)
return outputs
class BartClassificationHead(nn.Module):
"""Head for sentence-level classification tasks."""
def __init__(
self,
input_dim: int,
inner_dim: int,
num_classes: int,
pooler_dropout: float,
):
super().__init__()
self.dense = nn.Linear(input_dim, inner_dim)
self.dropout = nn.Dropout(p=pooler_dropout)
self.out_proj = nn.Linear(inner_dim, num_classes)
def forward(self, hidden_states: torch.Tensor) -> torch.Tensor:
hidden_states = self.dropout(hidden_states)
hidden_states = self.dense(hidden_states)
hidden_states = torch.tanh(hidden_states)
hidden_states = self.dropout(hidden_states)
hidden_states = self.out_proj(hidden_states)
return hidden_states
class BartPretrainedModel(PreTrainedModel):
config_class = BartConfig
base_model_prefix = "model"
supports_gradient_checkpointing = True
_keys_to_ignore_on_load_unexpected = ["encoder.version", "decoder.version"]
_no_split_modules = [r"BartEncoderLayer", r"BartDecoderLayer"]
_skip_keys_device_placement = "past_key_values"
def _init_weights(self, module):
std = self.config.init_std
if isinstance(module, nn.Linear):
module.weight.data.normal_(mean=0.0, std=std)
if module.bias is not None:
module.bias.data.zero_()
elif isinstance(module, nn.Embedding):
module.weight.data.normal_(mean=0.0, std=std)
if module.padding_idx is not None:
module.weight.data[module.padding_idx].zero_()
def _set_gradient_checkpointing(self, module, value=False):
if isinstance(module, (BartDecoder, BartEncoder)):
module.gradient_checkpointing = value
@property
def dummy_inputs(self):
pad_token = self.config.pad_token_id
input_ids = torch.tensor([[0, 6, 10, 4, 2], [0, 8, 12, 2, pad_token]], device=self.device)
dummy_inputs = {
"attention_mask": input_ids.ne(pad_token),
"input_ids": input_ids,
}
return dummy_inputs
class PretrainedBartModel(BartPretrainedModel):
def __init_subclass__(self):
warnings.warn(
"The class `PretrainedBartModel` has been depreciated, please use `BartPretrainedModel` instead.",
FutureWarning,
)
BART_START_DOCSTRING = r"""
This model inherits from [`PreTrainedModel`]. Check the superclass documentation for the generic methods the
library implements for all its model (such as downloading or saving, resizing the input embeddings, pruning heads
etc.)
This model is also a PyTorch [torch.nn.Module](https://pytorch.org/docs/stable/nn.html#torch.nn.Module) subclass.
Use it as a regular PyTorch Module and refer to the PyTorch documentation for all matter related to general usage
and behavior.
Parameters:
config ([`BartConfig`]):
Model configuration class with all the parameters of the model. Initializing with a config file does not
load the weights associated with the model, only the configuration. Check out the
[`~PreTrainedModel.from_pretrained`] method to load the model weights.
"""
BART_GENERATION_EXAMPLE = r"""
Summarization example:
```python
>>> from transformers import AutoTokenizer, BartForConditionalGeneration
>>> model = BartForConditionalGeneration.from_pretrained("facebook/bart-large-cnn")
>>> tokenizer = AutoTokenizer.from_pretrained("facebook/bart-large-cnn")
>>> ARTICLE_TO_SUMMARIZE = (
... "PG&E stated it scheduled the blackouts in response to forecasts for high winds "
... "amid dry conditions. The aim is to reduce the risk of wildfires. Nearly 800 thousand customers were "
... "scheduled to be affected by the shutoffs which were expected to last through at least midday tomorrow."
... )
>>> inputs = tokenizer([ARTICLE_TO_SUMMARIZE], max_length=1024, return_tensors="pt")
>>> # Generate Summary
>>> summary_ids = model.generate(inputs["input_ids"], num_beams=2, min_length=0, max_length=20)
>>> tokenizer.batch_decode(summary_ids, skip_special_tokens=True, clean_up_tokenization_spaces=False)[0]
'PG&E scheduled the blackouts in response to forecasts for high winds amid dry conditions'
```
Mask filling example:
```python
>>> from transformers import AutoTokenizer, BartForConditionalGeneration
>>> tokenizer = AutoTokenizer.from_pretrained("facebook/bart-base")
>>> model = BartForConditionalGeneration.from_pretrained("facebook/bart-base")
>>> TXT = "My friends are <mask> but they eat too many carbs."
>>> input_ids = tokenizer([TXT], return_tensors="pt")["input_ids"]
>>> logits = model(input_ids).logits
>>> masked_index = (input_ids[0] == tokenizer.mask_token_id).nonzero().item()
>>> probs = logits[0, masked_index].softmax(dim=0)
>>> values, predictions = probs.topk(5)
>>> tokenizer.decode(predictions).split()
['not', 'good', 'healthy', 'great', 'very']
```
"""
BART_INPUTS_DOCSTRING = r"""
Args:
input_ids (`torch.LongTensor` of shape `(batch_size, sequence_length)`):
Indices of input sequence tokens in the vocabulary. Padding will be ignored by default should you provide
it.
Indices can be obtained using [`AutoTokenizer`]. See [`PreTrainedTokenizer.encode`] and
[`PreTrainedTokenizer.__call__`] for details.
[What are input IDs?](../glossary#input-ids)
attention_mask (`torch.Tensor` of shape `(batch_size, sequence_length)`, *optional*):
Mask to avoid performing attention on padding token indices. Mask values selected in `[0, 1]`:
- 1 for tokens that are **not masked**,
- 0 for tokens that are **masked**.
[What are attention masks?](../glossary#attention-mask)
decoder_input_ids (`torch.LongTensor` of shape `(batch_size, target_sequence_length)`, *optional*):
Indices of decoder input sequence tokens in the vocabulary.
Indices can be obtained using [`AutoTokenizer`]. See [`PreTrainedTokenizer.encode`] and
[`PreTrainedTokenizer.__call__`] for details.
[What are decoder input IDs?](../glossary#decoder-input-ids)
Bart uses the `eos_token_id` as the starting token for `decoder_input_ids` generation. If `past_key_values`
is used, optionally only the last `decoder_input_ids` have to be input (see `past_key_values`).
For translation and summarization training, `decoder_input_ids` should be provided. If no
`decoder_input_ids` is provided, the model will create this tensor by shifting the `input_ids` to the right
for denoising pre-training following the paper.
decoder_attention_mask (`torch.LongTensor` of shape `(batch_size, target_sequence_length)`, *optional*):
Default behavior: generate a tensor that ignores pad tokens in `decoder_input_ids`. Causal mask will also
be used by default.
If you want to change padding behavior, you should read [`modeling_bart._prepare_decoder_attention_mask`]
and modify to your needs. See diagram 1 in [the paper](https://arxiv.org/abs/1910.13461) for more
information on the default strategy.
head_mask (`torch.Tensor` of shape `(encoder_layers, encoder_attention_heads)`, *optional*):
Mask to nullify selected heads of the attention modules in the encoder. Mask values selected in `[0, 1]`:
- 1 indicates the head is **not masked**,
- 0 indicates the head is **masked**.
decoder_head_mask (`torch.Tensor` of shape `(decoder_layers, decoder_attention_heads)`, *optional*):
Mask to nullify selected heads of the attention modules in the decoder. Mask values selected in `[0, 1]`:
- 1 indicates the head is **not masked**,
- 0 indicates the head is **masked**.
cross_attn_head_mask (`torch.Tensor` of shape `(decoder_layers, decoder_attention_heads)`, *optional*):
Mask to nullify selected heads of the cross-attention modules in the decoder. Mask values selected in `[0,
1]`:
- 1 indicates the head is **not masked**,
- 0 indicates the head is **masked**.
encoder_outputs (`tuple(tuple(torch.FloatTensor)`, *optional*):
Tuple consists of (`last_hidden_state`, *optional*: `hidden_states`, *optional*: `attentions`)
`last_hidden_state` of shape `(batch_size, sequence_length, hidden_size)`, *optional*) is a sequence of
hidden-states at the output of the last layer of the encoder. Used in the cross-attention of the decoder.
past_key_values (`tuple(tuple(torch.FloatTensor))`, *optional*, returned when `use_cache=True` is passed or when `config.use_cache=True`):
Tuple of `tuple(torch.FloatTensor)` of length `config.n_layers`, with each tuple having 2 tensors of shape
`(batch_size, num_heads, sequence_length, embed_size_per_head)`) and 2 additional tensors of shape
`(batch_size, num_heads, encoder_sequence_length, embed_size_per_head)`.
Contains pre-computed hidden-states (key and values in the self-attention blocks and in the cross-attention
blocks) that can be used (see `past_key_values` input) to speed up sequential decoding.
If `past_key_values` are used, the user can optionally input only the last `decoder_input_ids` (those that
don't have their past key value states given to this model) of shape `(batch_size, 1)` instead of all
`decoder_input_ids` of shape `(batch_size, sequence_length)`. inputs_embeds (`torch.FloatTensor` of shape
`(batch_size, sequence_length, hidden_size)`, *optional*): Optionally, instead of passing `input_ids` you
can choose to directly pass an embedded representation. This is useful if you want more control over how to
convert `input_ids` indices into associated vectors than the model's internal embedding lookup matrix.
decoder_inputs_embeds (`torch.FloatTensor` of shape `(batch_size, target_sequence_length, hidden_size)`, *optional*):
Optionally, instead of passing `decoder_input_ids` you can choose to directly pass an embedded
representation. If `past_key_values` is used, optionally only the last `decoder_inputs_embeds` have to be
input (see `past_key_values`). This is useful if you want more control over how to convert
`decoder_input_ids` indices into associated vectors than the model's internal embedding lookup matrix.
If `decoder_input_ids` and `decoder_inputs_embeds` are both unset, `decoder_inputs_embeds` takes the value
of `inputs_embeds`.
use_cache (`bool`, *optional*):
If set to `True`, `past_key_values` key value states are returned and can be used to speed up decoding (see
`past_key_values`).
output_attentions (`bool`, *optional*):
Whether or not to return the attentions tensors of all attention layers. See `attentions` under returned
tensors for more detail.
output_hidden_states (`bool`, *optional*):
Whether or not to return the hidden states of all layers. See `hidden_states` under returned tensors for
more detail.
return_dict (`bool`, *optional*):
Whether or not to return a [`~utils.ModelOutput`] instead of a plain tuple.
"""
class BartEncoder(BartPretrainedModel):
"""
Transformer encoder consisting of *config.encoder_layers* self attention layers. Each layer is a
[`BartEncoderLayer`].
Args:
config: BartConfig
embed_tokens (nn.Embedding): output embedding
"""
def __init__(self, config: BartConfig, embed_tokens: Optional[nn.Embedding] = None):
super().__init__(config)
self.dropout = config.dropout
self.layerdrop = config.encoder_layerdrop
embed_dim = config.d_model
self.padding_idx = config.pad_token_id
self.max_source_positions = config.max_position_embeddings
self.embed_scale = math.sqrt(embed_dim) if config.scale_embedding else 1.0
self.embed_tokens = nn.Embedding(config.vocab_size, embed_dim, self.padding_idx)
if embed_tokens is not None:
self.embed_tokens.weight = embed_tokens.weight
self.embed_positions = BartLearnedPositionalEmbedding(
config.max_position_embeddings,
embed_dim,
)
self.layers = nn.ModuleList([BartEncoderLayer(config) for _ in range(config.encoder_layers)])
self.layernorm_embedding = nn.LayerNorm(embed_dim)
self.gradient_checkpointing = False
# Initialize weights and apply final processing
self.post_init()
def get_input_embeddings(self):
return self.embed_tokens
def set_input_embeddings(self, value):
self.embed_tokens = value
def forward(
self,
input_ids: torch.LongTensor = None,
attention_mask: Optional[torch.Tensor] = None,
head_mask: Optional[torch.Tensor] = None,
inputs_embeds: Optional[torch.FloatTensor] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[Tuple, BaseModelOutput]:
r"""
Args:
input_ids (`torch.LongTensor` of shape `(batch_size, sequence_length)`):
Indices of input sequence tokens in the vocabulary. Padding will be ignored by default should you
provide it.
Indices can be obtained using [`AutoTokenizer`]. See [`PreTrainedTokenizer.encode`] and
[`PreTrainedTokenizer.__call__`] for details.
[What are input IDs?](../glossary#input-ids)
attention_mask (`torch.Tensor` of shape `(batch_size, sequence_length)`, *optional*):
Mask to avoid performing attention on padding token indices. Mask values selected in `[0, 1]`:
- 1 for tokens that are **not masked**,
- 0 for tokens that are **masked**.
[What are attention masks?](../glossary#attention-mask)
head_mask (`torch.Tensor` of shape `(encoder_layers, encoder_attention_heads)`, *optional*):
Mask to nullify selected heads of the attention modules. Mask values selected in `[0, 1]`:
- 1 indicates the head is **not masked**,
- 0 indicates the head is **masked**.
inputs_embeds (`torch.FloatTensor` of shape `(batch_size, sequence_length, hidden_size)`, *optional*):
Optionally, instead of passing `input_ids` you can choose to directly pass an embedded representation.
This is useful if you want more control over how to convert `input_ids` indices into associated vectors
than the model's internal embedding lookup matrix.
output_attentions (`bool`, *optional*):
Whether or not to return the attentions tensors of all attention layers. See `attentions` under
returned tensors for more detail.
output_hidden_states (`bool`, *optional*):
Whether or not to return the hidden states of all layers. See `hidden_states` under returned tensors
for more detail.
return_dict (`bool`, *optional*):
Whether or not to return a [`~utils.ModelOutput`] instead of a plain tuple.
"""
output_attentions = output_attentions if output_attentions is not None else self.config.output_attentions
output_hidden_states = (
output_hidden_states if output_hidden_states is not None else self.config.output_hidden_states
)
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
# retrieve input_ids and inputs_embeds
if input_ids is not None and inputs_embeds is not None:
raise ValueError("You cannot specify both input_ids and inputs_embeds at the same time")
elif input_ids is not None:
input = input_ids
input_ids = input_ids.view(-1, input_ids.shape[-1])
elif inputs_embeds is not None:
input = inputs_embeds[:, :, -1]
else:
raise ValueError("You have to specify either input_ids or inputs_embeds")
if inputs_embeds is None:
inputs_embeds = self.embed_tokens(input_ids) * self.embed_scale
embed_pos = self.embed_positions(input)
embed_pos = embed_pos.to(inputs_embeds.device)
hidden_states = inputs_embeds + embed_pos
hidden_states = self.layernorm_embedding(hidden_states)
hidden_states = nn.functional.dropout(hidden_states, p=self.dropout, training=self.training)
# expand attention_mask
if attention_mask is not None:
# [bsz, seq_len] -> [bsz, 1, tgt_seq_len, src_seq_len]
attention_mask = _expand_mask(attention_mask, inputs_embeds.dtype)
encoder_states = () if output_hidden_states else None
all_attentions = () if output_attentions else None
# check if head_mask has a correct number of layers specified if desired
if head_mask is not None:
if head_mask.size()[0] != (len(self.layers)):
raise ValueError(
f"The head_mask should be specified for {len(self.layers)} layers, but it is for"
f" {head_mask.size()[0]}."
)
for idx, encoder_layer in enumerate(self.layers):
if output_hidden_states:
encoder_states = encoder_states + (hidden_states,)
# add LayerDrop (see https://arxiv.org/abs/1909.11556 for description)
to_drop = False
if self.training:
dropout_probability = torch.rand([])
if dropout_probability < self.layerdrop: # skip the layer
to_drop = True
if to_drop:
layer_outputs = (None, None)
else:
if self.gradient_checkpointing and self.training:
def create_custom_forward(module):
def custom_forward(*inputs):
return module(*inputs, output_attentions)
return custom_forward
layer_outputs = torch.utils.checkpoint.checkpoint(
create_custom_forward(encoder_layer),
hidden_states,
attention_mask,
(head_mask[idx] if head_mask is not None else None),
)
else:
layer_outputs = encoder_layer(
hidden_states,
attention_mask,
layer_head_mask=(head_mask[idx] if head_mask is not None else None),
output_attentions=output_attentions,
)
hidden_states = layer_outputs[0]
if output_attentions:
all_attentions = all_attentions + (layer_outputs[1],)
if output_hidden_states:
encoder_states = encoder_states + (hidden_states,)
if not return_dict:
return tuple(v for v in [hidden_states, encoder_states, all_attentions] if v is not None)
return BaseModelOutput(
last_hidden_state=hidden_states, hidden_states=encoder_states, attentions=all_attentions
)
class BartDecoder(BartPretrainedModel):
"""
Transformer decoder consisting of *config.decoder_layers* layers. Each layer is a [`BartDecoderLayer`]
Args:
config: BartConfig
embed_tokens (nn.Embedding): output embedding
"""
def __init__(self, config: BartConfig, embed_tokens: Optional[nn.Embedding] = None):
super().__init__(config)
self.dropout = config.dropout
self.layerdrop = config.decoder_layerdrop
self.padding_idx = config.pad_token_id
self.max_target_positions = config.max_position_embeddings
self.embed_scale = math.sqrt(config.d_model) if config.scale_embedding else 1.0
self.embed_tokens = nn.Embedding(config.vocab_size, config.d_model, self.padding_idx)
if embed_tokens is not None:
self.embed_tokens.weight = embed_tokens.weight
self.embed_positions = BartLearnedPositionalEmbedding(
config.max_position_embeddings,
config.d_model,
)
self.layers = nn.ModuleList([BartDecoderLayer(config) for _ in range(config.decoder_layers)])
self.layernorm_embedding = nn.LayerNorm(config.d_model)
self.gradient_checkpointing = False
# Initialize weights and apply final processing
self.post_init()
def get_input_embeddings(self):
return self.embed_tokens
def set_input_embeddings(self, value):
self.embed_tokens = value
def _prepare_decoder_attention_mask(self, attention_mask, input_shape, inputs_embeds, past_key_values_length):
# create causal mask
# [bsz, seq_len] -> [bsz, 1, tgt_seq_len, src_seq_len]
combined_attention_mask = None
if input_shape[-1] > 1:
combined_attention_mask = _make_causal_mask(
input_shape,
inputs_embeds.dtype,
device=inputs_embeds.device,
past_key_values_length=past_key_values_length,
)
if attention_mask is not None:
# [bsz, seq_len] -> [bsz, 1, tgt_seq_len, src_seq_len]
expanded_attn_mask = _expand_mask(attention_mask, inputs_embeds.dtype, tgt_len=input_shape[-1]).to(
inputs_embeds.device
)
combined_attention_mask = (
expanded_attn_mask if combined_attention_mask is None else expanded_attn_mask + combined_attention_mask
)
return combined_attention_mask
def forward(
self,
input_ids: torch.LongTensor = None,
attention_mask: Optional[torch.Tensor] = None,
encoder_hidden_states: Optional[torch.FloatTensor] = None,
encoder_attention_mask: Optional[torch.LongTensor] = None,
head_mask: Optional[torch.Tensor] = None,
cross_attn_head_mask: Optional[torch.Tensor] = None,
past_key_values: Optional[List[torch.FloatTensor]] = None,
inputs_embeds: Optional[torch.FloatTensor] = None,
use_cache: Optional[bool] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[Tuple, BaseModelOutputWithPastAndCrossAttentions]:
r"""
Args:
input_ids (`torch.LongTensor` of shape `(batch_size, sequence_length)`):
Indices of input sequence tokens in the vocabulary. Padding will be ignored by default should you
provide it.
Indices can be obtained using [`AutoTokenizer`]. See [`PreTrainedTokenizer.encode`] and
[`PreTrainedTokenizer.__call__`] for details.
[What are input IDs?](../glossary#input-ids)
attention_mask (`torch.Tensor` of shape `(batch_size, sequence_length)`, *optional*):
Mask to avoid performing attention on padding token indices. Mask values selected in `[0, 1]`:
- 1 for tokens that are **not masked**,
- 0 for tokens that are **masked**.
[What are attention masks?](../glossary#attention-mask)
encoder_hidden_states (`torch.FloatTensor` of shape `(batch_size, encoder_sequence_length, hidden_size)`, *optional*):
Sequence of hidden-states at the output of the last layer of the encoder. Used in the cross-attention
of the decoder.
encoder_attention_mask (`torch.LongTensor` of shape `(batch_size, encoder_sequence_length)`, *optional*):
Mask to avoid performing cross-attention on padding tokens indices of encoder input_ids. Mask values
selected in `[0, 1]`:
- 1 for tokens that are **not masked**,
- 0 for tokens that are **masked**.
[What are attention masks?](../glossary#attention-mask)
head_mask (`torch.Tensor` of shape `(decoder_layers, decoder_attention_heads)`, *optional*):
Mask to nullify selected heads of the attention modules. Mask values selected in `[0, 1]`:
- 1 indicates the head is **not masked**,
- 0 indicates the head is **masked**.
cross_attn_head_mask (`torch.Tensor` of shape `(decoder_layers, decoder_attention_heads)`, *optional*):
Mask to nullify selected heads of the cross-attention modules in the decoder to avoid performing
cross-attention on hidden heads. Mask values selected in `[0, 1]`:
- 1 indicates the head is **not masked**,
- 0 indicates the head is **masked**.
past_key_values (`tuple(tuple(torch.FloatTensor))`, *optional*, returned when `use_cache=True` is passed or when `config.use_cache=True`):
Tuple of `tuple(torch.FloatTensor)` of length `config.n_layers`, with each tuple having 2 tensors of
shape `(batch_size, num_heads, sequence_length, embed_size_per_head)`) and 2 additional tensors of
shape `(batch_size, num_heads, encoder_sequence_length, embed_size_per_head)`.
Contains pre-computed hidden-states (key and values in the self-attention blocks and in the
cross-attention blocks) that can be used (see `past_key_values` input) to speed up sequential decoding.
If `past_key_values` are used, the user can optionally input only the last `decoder_input_ids` (those
that don't have their past key value states given to this model) of shape `(batch_size, 1)` instead of
all `decoder_input_ids` of shape `(batch_size, sequence_length)`. inputs_embeds (`torch.FloatTensor` of
shape `(batch_size, sequence_length, hidden_size)`, *optional*): Optionally, instead of passing
`input_ids` you can choose to directly pass an embedded representation. This is useful if you want more
control over how to convert `input_ids` indices into associated vectors than the model's internal
embedding lookup matrix.
output_attentions (`bool`, *optional*):
Whether or not to return the attentions tensors of all attention layers. See `attentions` under
returned tensors for more detail.
output_hidden_states (`bool`, *optional*):
Whether or not to return the hidden states of all layers. See `hidden_states` under returned tensors
for more detail.
return_dict (`bool`, *optional*):
Whether or not to return a [`~utils.ModelOutput`] instead of a plain tuple.
"""
output_attentions = output_attentions if output_attentions is not None else self.config.output_attentions
output_hidden_states = (
output_hidden_states if output_hidden_states is not None else self.config.output_hidden_states
)
use_cache = use_cache if use_cache is not None else self.config.use_cache
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
# retrieve input_ids and inputs_embeds
if input_ids is not None and inputs_embeds is not None:
raise ValueError("You cannot specify both decoder_input_ids and decoder_inputs_embeds at the same time")
elif input_ids is not None:
input = input_ids
input_shape = input.shape
input_ids = input_ids.view(-1, input_shape[-1])
elif inputs_embeds is not None:
input_shape = inputs_embeds.size()[:-1]
input = inputs_embeds[:, :, -1]
else:
raise ValueError("You have to specify either decoder_input_ids or decoder_inputs_embeds")
# past_key_values_length
past_key_values_length = past_key_values[0][0].shape[2] if past_key_values is not None else 0
if inputs_embeds is None:
inputs_embeds = self.embed_tokens(input) * self.embed_scale
attention_mask = self._prepare_decoder_attention_mask(
attention_mask, input_shape, inputs_embeds, past_key_values_length
)
# expand encoder attention mask
if encoder_hidden_states is not None and encoder_attention_mask is not None:
# [bsz, seq_len] -> [bsz, 1, tgt_seq_len, src_seq_len]
encoder_attention_mask = _expand_mask(encoder_attention_mask, inputs_embeds.dtype, tgt_len=input_shape[-1])
# embed positions
positions = self.embed_positions(input, past_key_values_length)
positions = positions.to(inputs_embeds.device)
hidden_states = inputs_embeds + positions
hidden_states = self.layernorm_embedding(hidden_states)
hidden_states = nn.functional.dropout(hidden_states, p=self.dropout, training=self.training)
if self.gradient_checkpointing and self.training:
if use_cache:
logger.warning_once(
"`use_cache=True` is incompatible with gradient checkpointing. Setting `use_cache=False`..."
)
use_cache = False
# decoder layers
all_hidden_states = () if output_hidden_states else None
all_self_attns = () if output_attentions else None
all_cross_attentions = () if (output_attentions and encoder_hidden_states is not None) else None
next_decoder_cache = () if use_cache else None
# check if head_mask/cross_attn_head_mask has a correct number of layers specified if desired
for attn_mask, mask_name in zip([head_mask, cross_attn_head_mask], ["head_mask", "cross_attn_head_mask"]):
if attn_mask is not None:
if attn_mask.size()[0] != (len(self.layers)):
raise ValueError(
f"The `{mask_name}` should be specified for {len(self.layers)} layers, but it is for"
f" {head_mask.size()[0]}."
)
for idx, decoder_layer in enumerate(self.layers):
# add LayerDrop (see https://arxiv.org/abs/1909.11556 for description)
if output_hidden_states:
all_hidden_states += (hidden_states,)
if self.training:
dropout_probability = torch.rand([])
if dropout_probability < self.layerdrop:
continue
past_key_value = past_key_values[idx] if past_key_values is not None else None
if self.gradient_checkpointing and self.training:
def create_custom_forward(module):
def custom_forward(*inputs):
# None for past_key_value
return module(*inputs, output_attentions, use_cache)
return custom_forward
layer_outputs = torch.utils.checkpoint.checkpoint(
create_custom_forward(decoder_layer),
hidden_states,
attention_mask,
encoder_hidden_states,
encoder_attention_mask,
head_mask[idx] if head_mask is not None else None,
cross_attn_head_mask[idx] if cross_attn_head_mask is not None else None,
None,
)
else:
layer_outputs = decoder_layer(
hidden_states,
attention_mask=attention_mask,
encoder_hidden_states=encoder_hidden_states,
encoder_attention_mask=encoder_attention_mask,
layer_head_mask=(head_mask[idx] if head_mask is not None else None),
cross_attn_layer_head_mask=(
cross_attn_head_mask[idx] if cross_attn_head_mask is not None else None
),
past_key_value=past_key_value,
output_attentions=output_attentions,
use_cache=use_cache,
)
hidden_states = layer_outputs[0]
if use_cache:
next_decoder_cache += (layer_outputs[3 if output_attentions else 1],)
if output_attentions:
all_self_attns += (layer_outputs[1],)
if encoder_hidden_states is not None:
all_cross_attentions += (layer_outputs[2],)
# add hidden states from the last decoder layer
if output_hidden_states:
all_hidden_states += (hidden_states,)
next_cache = next_decoder_cache if use_cache else None
if not return_dict:
return tuple(
v
for v in [hidden_states, next_cache, all_hidden_states, all_self_attns, all_cross_attentions]
if v is not None
)
return BaseModelOutputWithPastAndCrossAttentions(
last_hidden_state=hidden_states,
past_key_values=next_cache,
hidden_states=all_hidden_states,
attentions=all_self_attns,
cross_attentions=all_cross_attentions,
)
@add_start_docstrings(
"The bare BART Model outputting raw hidden-states without any specific head on top.",
BART_START_DOCSTRING,
)
class BartModel(BartPretrainedModel):
_tied_weights_keys = ["encoder.embed_tokens.weight", "decoder.embed_tokens.weight"]
def __init__(self, config: BartConfig):
super().__init__(config)
padding_idx, vocab_size = config.pad_token_id, config.vocab_size
self.shared = nn.Embedding(vocab_size, config.d_model, padding_idx)
self.encoder = BartEncoder(config, self.shared)
self.decoder = BartDecoder(config, self.shared)
# Initialize weights and apply final processing
self.post_init()
def get_input_embeddings(self):
return self.shared
def set_input_embeddings(self, value):
self.shared = value
self.encoder.embed_tokens = self.shared
self.decoder.embed_tokens = self.shared
def get_encoder(self):
return self.encoder
def get_decoder(self):
return self.decoder
@add_start_docstrings_to_model_forward(BART_INPUTS_DOCSTRING)
@add_code_sample_docstrings(
checkpoint=_CHECKPOINT_FOR_DOC,
output_type=Seq2SeqModelOutput,
config_class=_CONFIG_FOR_DOC,
expected_output=_EXPECTED_OUTPUT_SHAPE,
)
def forward(
self,
input_ids: torch.LongTensor = None,
attention_mask: Optional[torch.Tensor] = None,
decoder_input_ids: Optional[torch.LongTensor] = None,
decoder_attention_mask: Optional[torch.LongTensor] = None,
head_mask: Optional[torch.Tensor] = None,
decoder_head_mask: Optional[torch.Tensor] = None,
cross_attn_head_mask: Optional[torch.Tensor] = None,
encoder_outputs: Optional[List[torch.FloatTensor]] = None,
past_key_values: Optional[List[torch.FloatTensor]] = None,
inputs_embeds: Optional[torch.FloatTensor] = None,
decoder_inputs_embeds: Optional[torch.FloatTensor] = None,
use_cache: Optional[bool] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[Tuple, Seq2SeqModelOutput]:
# different to other models, Bart automatically creates decoder_input_ids from
# input_ids if no decoder_input_ids are provided
if decoder_input_ids is None and decoder_inputs_embeds is None:
if input_ids is None:
raise ValueError(
"If no `decoder_input_ids` or `decoder_inputs_embeds` are "
"passed, `input_ids` cannot be `None`. Please pass either "
"`input_ids` or `decoder_input_ids` or `decoder_inputs_embeds`."
)
decoder_input_ids = shift_tokens_right(
input_ids, self.config.pad_token_id, self.config.decoder_start_token_id
)
output_attentions = output_attentions if output_attentions is not None else self.config.output_attentions
output_hidden_states = (
output_hidden_states if output_hidden_states is not None else self.config.output_hidden_states
)
use_cache = use_cache if use_cache is not None else self.config.use_cache
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
if encoder_outputs is None:
encoder_outputs = self.encoder(
input_ids=input_ids,
attention_mask=attention_mask,
head_mask=head_mask,
inputs_embeds=inputs_embeds,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
# If the user passed a tuple for encoder_outputs, we wrap it in a BaseModelOutput when return_dict=True
elif return_dict and not isinstance(encoder_outputs, BaseModelOutput):
encoder_outputs = BaseModelOutput(
last_hidden_state=encoder_outputs[0],
hidden_states=encoder_outputs[1] if len(encoder_outputs) > 1 else None,
attentions=encoder_outputs[2] if len(encoder_outputs) > 2 else None,
)
# decoder outputs consists of (dec_features, past_key_value, dec_hidden, dec_attn)
decoder_outputs = self.decoder(
input_ids=decoder_input_ids,
attention_mask=decoder_attention_mask,
encoder_hidden_states=encoder_outputs[0],
encoder_attention_mask=attention_mask,
head_mask=decoder_head_mask,
cross_attn_head_mask=cross_attn_head_mask,
past_key_values=past_key_values,
inputs_embeds=decoder_inputs_embeds,
use_cache=use_cache,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
if not return_dict:
return decoder_outputs + encoder_outputs
return Seq2SeqModelOutput(
last_hidden_state=decoder_outputs.last_hidden_state,
past_key_values=decoder_outputs.past_key_values,
decoder_hidden_states=decoder_outputs.hidden_states,
decoder_attentions=decoder_outputs.attentions,
cross_attentions=decoder_outputs.cross_attentions,
encoder_last_hidden_state=encoder_outputs.last_hidden_state,
encoder_hidden_states=encoder_outputs.hidden_states,
encoder_attentions=encoder_outputs.attentions,
)
@add_start_docstrings(
"The BART Model with a language modeling head. Can be used for summarization.", BART_START_DOCSTRING
)
class BartForConditionalGeneration(BartPretrainedModel):
base_model_prefix = "model"
_tied_weights_keys = ["encoder.embed_tokens.weight", "decoder.embed_tokens.weight", "lm_head.weight"]
_keys_to_ignore_on_load_missing = ["final_logits_bias"]
def __init__(self, config: BartConfig):
super().__init__(config)
self.model = BartModel(config)
self.register_buffer("final_logits_bias", torch.zeros((1, self.model.shared.num_embeddings)))
self.lm_head = nn.Linear(config.d_model, self.model.shared.num_embeddings, bias=False)
# Initialize weights and apply final processing
self.post_init()
def get_encoder(self):
return self.model.get_encoder()
def get_decoder(self):
return self.model.get_decoder()
def resize_token_embeddings(self, new_num_tokens: int) -> nn.Embedding:
new_embeddings = super().resize_token_embeddings(new_num_tokens)
self._resize_final_logits_bias(new_num_tokens)
return new_embeddings
def _resize_final_logits_bias(self, new_num_tokens: int) -> None:
old_num_tokens = self.final_logits_bias.shape[-1]
if new_num_tokens <= old_num_tokens:
new_bias = self.final_logits_bias[:, :new_num_tokens]
else:
extra_bias = torch.zeros((1, new_num_tokens - old_num_tokens), device=self.final_logits_bias.device)
new_bias = torch.cat([self.final_logits_bias, extra_bias], dim=1)
self.register_buffer("final_logits_bias", new_bias)
def get_output_embeddings(self):
return self.lm_head
def set_output_embeddings(self, new_embeddings):
self.lm_head = new_embeddings
@add_start_docstrings_to_model_forward(BART_INPUTS_DOCSTRING)
@replace_return_docstrings(output_type=Seq2SeqLMOutput, config_class=_CONFIG_FOR_DOC)
@add_end_docstrings(BART_GENERATION_EXAMPLE)
def forward(
self,
input_ids: torch.LongTensor = None,
attention_mask: Optional[torch.Tensor] = None,
decoder_input_ids: Optional[torch.LongTensor] = None,
decoder_attention_mask: Optional[torch.LongTensor] = None,
head_mask: Optional[torch.Tensor] = None,
decoder_head_mask: Optional[torch.Tensor] = None,
cross_attn_head_mask: Optional[torch.Tensor] = None,
encoder_outputs: Optional[List[torch.FloatTensor]] = None,
past_key_values: Optional[List[torch.FloatTensor]] = None,
inputs_embeds: Optional[torch.FloatTensor] = None,
decoder_inputs_embeds: Optional[torch.FloatTensor] = None,
labels: Optional[torch.LongTensor] = None,
use_cache: Optional[bool] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[Tuple, Seq2SeqLMOutput]:
r"""
labels (`torch.LongTensor` of shape `(batch_size, sequence_length)`, *optional*):
Labels for computing the masked language modeling loss. Indices should either be in `[0, ...,
config.vocab_size]` or -100 (see `input_ids` docstring). Tokens with indices set to `-100` are ignored
(masked), the loss is only computed for the tokens with labels in `[0, ..., config.vocab_size]`.
Returns:
"""
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
if labels is not None:
if use_cache:
logger.warning("The `use_cache` argument is changed to `False` since `labels` is provided.")
use_cache = False
if decoder_input_ids is None and decoder_inputs_embeds is None:
decoder_input_ids = shift_tokens_right(
labels, self.config.pad_token_id, self.config.decoder_start_token_id
)
outputs = self.model(
input_ids,
attention_mask=attention_mask,
decoder_input_ids=decoder_input_ids,
encoder_outputs=encoder_outputs,
decoder_attention_mask=decoder_attention_mask,
head_mask=head_mask,
decoder_head_mask=decoder_head_mask,
cross_attn_head_mask=cross_attn_head_mask,
past_key_values=past_key_values,
inputs_embeds=inputs_embeds,
decoder_inputs_embeds=decoder_inputs_embeds,
use_cache=use_cache,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
lm_logits = self.lm_head(outputs[0])
lm_logits = lm_logits + self.final_logits_bias.to(lm_logits.device)
masked_lm_loss = None
if labels is not None:
labels = labels.to(lm_logits.device)
loss_fct = CrossEntropyLoss()
masked_lm_loss = loss_fct(lm_logits.view(-1, self.config.vocab_size), labels.view(-1))
if not return_dict:
output = (lm_logits,) + outputs[1:]
return ((masked_lm_loss,) + output) if masked_lm_loss is not None else output
return Seq2SeqLMOutput(
loss=masked_lm_loss,
logits=lm_logits,
past_key_values=outputs.past_key_values,
decoder_hidden_states=outputs.decoder_hidden_states,
decoder_attentions=outputs.decoder_attentions,
cross_attentions=outputs.cross_attentions,
encoder_last_hidden_state=outputs.encoder_last_hidden_state,
encoder_hidden_states=outputs.encoder_hidden_states,
encoder_attentions=outputs.encoder_attentions,
)
def prepare_inputs_for_generation(
self,
decoder_input_ids,
past_key_values=None,
attention_mask=None,
decoder_attention_mask=None,
head_mask=None,
decoder_head_mask=None,
cross_attn_head_mask=None,
use_cache=None,
encoder_outputs=None,
**kwargs,
):
# cut decoder_input_ids if past_key_values is used
if past_key_values is not None:
decoder_input_ids = decoder_input_ids[:, -1:]
return {
"input_ids": None, # encoder_outputs is defined. input_ids not needed
"encoder_outputs": encoder_outputs,
"past_key_values": past_key_values,
"decoder_input_ids": decoder_input_ids,
"attention_mask": attention_mask,
"decoder_attention_mask": decoder_attention_mask,
"head_mask": head_mask,
"decoder_head_mask": decoder_head_mask,
"cross_attn_head_mask": cross_attn_head_mask,
"use_cache": use_cache, # change this to avoid caching (presumably for debugging)
}
def prepare_decoder_input_ids_from_labels(self, labels: torch.Tensor):
return shift_tokens_right(labels, self.config.pad_token_id, self.config.decoder_start_token_id)
@staticmethod
def _reorder_cache(past_key_values, beam_idx):
reordered_past = ()
for layer_past in past_key_values:
# cached cross_attention states don't have to be reordered -> they are always the same
reordered_past += (
tuple(past_state.index_select(0, beam_idx) for past_state in layer_past[:2]) + layer_past[2:],
)
return reordered_past
@add_start_docstrings(
"""
Bart model with a sequence classification/head on top (a linear layer on top of the pooled output) e.g. for GLUE
tasks.
""",
BART_START_DOCSTRING,
)
class BartForSequenceClassification(BartPretrainedModel):
_tied_weights_keys = ["encoder.embed_tokens.weight", "decoder.embed_tokens.weight"]
def __init__(self, config: BartConfig, **kwargs):
super().__init__(config, **kwargs)
self.model = BartModel(config)
self.classification_head = BartClassificationHead(
config.d_model,
config.d_model,
config.num_labels,
config.classifier_dropout,
)
# Initialize weights and apply final processing
self.post_init()
@add_start_docstrings_to_model_forward(BART_INPUTS_DOCSTRING)
@add_code_sample_docstrings(
checkpoint=_CHECKPOINT_FOR_SEQUENCE_CLASSIFICATION,
output_type=Seq2SeqSequenceClassifierOutput,
config_class=_CONFIG_FOR_DOC,
expected_output=_SEQ_CLASS_EXPECTED_OUTPUT,
expected_loss=_SEQ_CLASS_EXPECTED_LOSS,
)
def forward(
self,
input_ids: torch.LongTensor = None,
attention_mask: Optional[torch.Tensor] = None,
decoder_input_ids: Optional[torch.LongTensor] = None,
decoder_attention_mask: Optional[torch.LongTensor] = None,
head_mask: Optional[torch.Tensor] = None,
decoder_head_mask: Optional[torch.Tensor] = None,
cross_attn_head_mask: Optional[torch.Tensor] = None,
encoder_outputs: Optional[List[torch.FloatTensor]] = None,
inputs_embeds: Optional[torch.FloatTensor] = None,
decoder_inputs_embeds: Optional[torch.FloatTensor] = None,
labels: Optional[torch.LongTensor] = None,
use_cache: Optional[bool] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[Tuple, Seq2SeqSequenceClassifierOutput]:
r"""
labels (`torch.LongTensor` of shape `(batch_size,)`, *optional*):
Labels for computing the sequence classification/regression loss. Indices should be in `[0, ...,
config.num_labels - 1]`. If `config.num_labels > 1` a classification loss is computed (Cross-Entropy).
"""
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
if labels is not None:
use_cache = False
if input_ids is None and inputs_embeds is not None:
raise NotImplementedError(
f"Passing input embeddings is currently not supported for {self.__class__.__name__}"
)
outputs = self.model(
input_ids,
attention_mask=attention_mask,
decoder_input_ids=decoder_input_ids,
decoder_attention_mask=decoder_attention_mask,
head_mask=head_mask,
decoder_head_mask=decoder_head_mask,
cross_attn_head_mask=cross_attn_head_mask,
encoder_outputs=encoder_outputs,
inputs_embeds=inputs_embeds,
decoder_inputs_embeds=decoder_inputs_embeds,
use_cache=use_cache,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
hidden_states = outputs[0] # last hidden state
eos_mask = input_ids.eq(self.config.eos_token_id).to(hidden_states.device)
if len(torch.unique_consecutive(eos_mask.sum(1))) > 1:
raise ValueError("All examples must have the same number of <eos> tokens.")
sentence_representation = hidden_states[eos_mask, :].view(hidden_states.size(0), -1, hidden_states.size(-1))[
:, -1, :
]
logits = self.classification_head(sentence_representation)
loss = None
if labels is not None:
labels = labels.to(logits.device)
if self.config.problem_type is None:
if self.config.num_labels == 1:
self.config.problem_type = "regression"
elif self.config.num_labels > 1 and (labels.dtype == torch.long or labels.dtype == torch.int):
self.config.problem_type = "single_label_classification"
else:
self.config.problem_type = "multi_label_classification"
if self.config.problem_type == "regression":
loss_fct = MSELoss()
if self.config.num_labels == 1:
loss = loss_fct(logits.squeeze(), labels.squeeze())
else:
loss = loss_fct(logits, labels)
elif self.config.problem_type == "single_label_classification":
loss_fct = CrossEntropyLoss()
loss = loss_fct(logits.view(-1, self.config.num_labels), labels.view(-1))
elif self.config.problem_type == "multi_label_classification":
loss_fct = BCEWithLogitsLoss()
loss = loss_fct(logits, labels)
if not return_dict:
output = (logits,) + outputs[1:]
return ((loss,) + output) if loss is not None else output
return Seq2SeqSequenceClassifierOutput(
loss=loss,
logits=logits,
past_key_values=outputs.past_key_values,
decoder_hidden_states=outputs.decoder_hidden_states,
decoder_attentions=outputs.decoder_attentions,
cross_attentions=outputs.cross_attentions,
encoder_last_hidden_state=outputs.encoder_last_hidden_state,
encoder_hidden_states=outputs.encoder_hidden_states,
encoder_attentions=outputs.encoder_attentions,
)
@add_start_docstrings(
"""
BART Model with a span classification head on top for extractive question-answering tasks like SQuAD (a linear
layer on top of the hidden-states output to compute `span start logits` and `span end logits`).
""",
BART_START_DOCSTRING,
)
class BartForQuestionAnswering(BartPretrainedModel):
_tied_weights_keys = ["encoder.embed_tokens.weight", "decoder.embed_tokens.weight"]
def __init__(self, config):
super().__init__(config)
config.num_labels = 2
self.num_labels = config.num_labels
self.model = BartModel(config)
self.qa_outputs = nn.Linear(config.hidden_size, config.num_labels)
# Initialize weights and apply final processing
self.post_init()
@add_start_docstrings_to_model_forward(BART_INPUTS_DOCSTRING)
@add_code_sample_docstrings(
checkpoint=_CHECKPOINT_FOR_QA,
output_type=Seq2SeqQuestionAnsweringModelOutput,
config_class=_CONFIG_FOR_DOC,
expected_loss=_QA_EXPECTED_LOSS,
expected_output=_QA_EXPECTED_OUTPUT,
)
def forward(
self,
input_ids: torch.Tensor = None,
attention_mask: Optional[torch.Tensor] = None,
decoder_input_ids: Optional[torch.LongTensor] = None,
decoder_attention_mask: Optional[torch.LongTensor] = None,
head_mask: Optional[torch.Tensor] = None,
decoder_head_mask: Optional[torch.Tensor] = None,
cross_attn_head_mask: Optional[torch.Tensor] = None,
encoder_outputs: Optional[List[torch.FloatTensor]] = None,
start_positions: Optional[torch.LongTensor] = None,
end_positions: Optional[torch.LongTensor] = None,
inputs_embeds: Optional[torch.FloatTensor] = None,
decoder_inputs_embeds: Optional[torch.FloatTensor] = None,
use_cache: Optional[bool] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[Tuple, Seq2SeqQuestionAnsweringModelOutput]:
r"""
start_positions (`torch.LongTensor` of shape `(batch_size,)`, *optional*):
Labels for position (index) of the start of the labelled span for computing the token classification loss.
Positions are clamped to the length of the sequence (*sequence_length*). Position outside of the sequence
are not taken into account for computing the loss.
end_positions (`torch.LongTensor` of shape `(batch_size,)`, *optional*):
Labels for position (index) of the end of the labelled span for computing the token classification loss.
Positions are clamped to the length of the sequence (*sequence_length*). Position outside of the sequence
are not taken into account for computing the loss.
"""
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
if start_positions is not None and end_positions is not None:
use_cache = False
outputs = self.model(
input_ids,
attention_mask=attention_mask,
decoder_input_ids=decoder_input_ids,
decoder_attention_mask=decoder_attention_mask,
head_mask=head_mask,
decoder_head_mask=decoder_head_mask,
cross_attn_head_mask=cross_attn_head_mask,
encoder_outputs=encoder_outputs,
inputs_embeds=inputs_embeds,
decoder_inputs_embeds=decoder_inputs_embeds,
use_cache=use_cache,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
sequence_output = outputs[0]
logits = self.qa_outputs(sequence_output)
start_logits, end_logits = logits.split(1, dim=-1)
start_logits = start_logits.squeeze(-1).contiguous()
end_logits = end_logits.squeeze(-1).contiguous()
total_loss = None
if start_positions is not None and end_positions is not None:
# If we are on multi-GPU, split add a dimension
if len(start_positions.size()) > 1:
start_positions = start_positions.squeeze(-1)
if len(end_positions.size()) > 1:
end_positions = end_positions.squeeze(-1)
# sometimes the start/end positions are outside our model inputs, we ignore these terms
ignored_index = start_logits.size(1)
start_positions = start_positions.clamp(0, ignored_index)
end_positions = end_positions.clamp(0, ignored_index)
loss_fct = CrossEntropyLoss(ignore_index=ignored_index)
start_loss = loss_fct(start_logits, start_positions)
end_loss = loss_fct(end_logits, end_positions)
total_loss = (start_loss + end_loss) / 2
if not return_dict:
output = (
start_logits,
end_logits,
) + outputs[1:]
return ((total_loss,) + output) if total_loss is not None else output
return Seq2SeqQuestionAnsweringModelOutput(
loss=total_loss,
start_logits=start_logits,
end_logits=end_logits,
past_key_values=outputs.past_key_values,
decoder_hidden_states=outputs.decoder_hidden_states,
decoder_attentions=outputs.decoder_attentions,
cross_attentions=outputs.cross_attentions,
encoder_last_hidden_state=outputs.encoder_last_hidden_state,
encoder_hidden_states=outputs.encoder_hidden_states,
encoder_attentions=outputs.encoder_attentions,
)
class BartDecoderWrapper(BartPretrainedModel):
"""
This wrapper class is a helper class to correctly load pretrained checkpoints when the causal language model is
used in combination with the [`EncoderDecoderModel`] framework.
"""
def __init__(self, config):
super().__init__(config)
self.decoder = BartDecoder(config)
def forward(self, *args, **kwargs):
return self.decoder(*args, **kwargs)
@add_start_docstrings(
"""
BART decoder with with a language modeling head on top (linear layer with weights tied to the input embeddings).
""",
BART_START_DOCSTRING,
)
class BartForCausalLM(BartPretrainedModel):
_tied_weights_keys = ["lm_head.weight"]
def __init__(self, config):
config = copy.deepcopy(config)
config.is_decoder = True
config.is_encoder_decoder = False
super().__init__(config)
self.model = BartDecoderWrapper(config)
self.lm_head = nn.Linear(config.hidden_size, config.vocab_size, bias=False)
# Initialize weights and apply final processing
self.post_init()
def get_input_embeddings(self):
return self.model.decoder.embed_tokens
def set_input_embeddings(self, value):
self.model.decoder.embed_tokens = value
def get_output_embeddings(self):
return self.lm_head
def set_output_embeddings(self, new_embeddings):
self.lm_head = new_embeddings
def set_decoder(self, decoder):
self.model.decoder = decoder
def get_decoder(self):
return self.model.decoder
@replace_return_docstrings(output_type=CausalLMOutputWithCrossAttentions, config_class=_CONFIG_FOR_DOC)
def forward(
self,
input_ids: torch.LongTensor = None,
attention_mask: Optional[torch.Tensor] = None,
encoder_hidden_states: Optional[torch.FloatTensor] = None,
encoder_attention_mask: Optional[torch.FloatTensor] = None,
head_mask: Optional[torch.Tensor] = None,
cross_attn_head_mask: Optional[torch.Tensor] = None,
past_key_values: Optional[List[torch.FloatTensor]] = None,
inputs_embeds: Optional[torch.FloatTensor] = None,
labels: Optional[torch.LongTensor] = None,
use_cache: Optional[bool] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[Tuple, CausalLMOutputWithCrossAttentions]:
r"""
Args:
input_ids (`torch.LongTensor` of shape `(batch_size, sequence_length)`):
Indices of input sequence tokens in the vocabulary. Padding will be ignored by default should you
provide it.
Indices can be obtained using [`AutoTokenizer`]. See [`PreTrainedTokenizer.encode`] and
[`PreTrainedTokenizer.__call__`] for details.
[What are input IDs?](../glossary#input-ids)
attention_mask (`torch.Tensor` of shape `(batch_size, sequence_length)`, *optional*):
Mask to avoid performing attention on padding token indices. Mask values selected in `[0, 1]`:
- 1 for tokens that are **not masked**,
- 0 for tokens that are **masked**.
[What are attention masks?](../glossary#attention-mask)
encoder_hidden_states (`torch.FloatTensor` of shape `(batch_size, sequence_length, hidden_size)`, *optional*):
Sequence of hidden-states at the output of the last layer of the encoder. Used in the cross-attention
if the model is configured as a decoder.
encoder_attention_mask (`torch.FloatTensor` of shape `(batch_size, sequence_length)`, *optional*):
Mask to avoid performing attention on the padding token indices of the encoder input. This mask is used
in the cross-attention if the model is configured as a decoder. Mask values selected in `[0, 1]`:
head_mask (`torch.Tensor` of shape `(decoder_layers, decoder_attention_heads)`, *optional*):
Mask to nullify selected heads of the attention modules. Mask values selected in `[0, 1]`:
- 1 indicates the head is **not masked**,
- 0 indicates the head is **masked**.
cross_attn_head_mask (`torch.Tensor` of shape `(decoder_layers, decoder_attention_heads)`, *optional*):
Mask to nullify selected heads of the cross-attention modules. Mask values selected in `[0, 1]`:
- 1 indicates the head is **not masked**,
- 0 indicates the head is **masked**.
past_key_values (`tuple(tuple(torch.FloatTensor))`, *optional*, returned when `use_cache=True` is passed or when `config.use_cache=True`):
Tuple of `tuple(torch.FloatTensor)` of length `config.n_layers`, with each tuple having 2 tensors of
shape `(batch_size, num_heads, sequence_length, embed_size_per_head)`) and 2 additional tensors of
shape `(batch_size, num_heads, encoder_sequence_length, embed_size_per_head)`. The two additional
tensors are only required when the model is used as a decoder in a Sequence to Sequence model.
Contains pre-computed hidden-states (key and values in the self-attention blocks and in the
cross-attention blocks) that can be used (see `past_key_values` input) to speed up sequential decoding.
If `past_key_values` are used, the user can optionally input only the last `decoder_input_ids` (those
that don't have their past key value states given to this model) of shape `(batch_size, 1)` instead of
all `decoder_input_ids` of shape `(batch_size, sequence_length)`.
labels (`torch.LongTensor` of shape `(batch_size, sequence_length)`, *optional*):
Labels for computing the masked language modeling loss. Indices should either be in `[0, ...,
config.vocab_size]` or -100 (see `input_ids` docstring). Tokens with indices set to `-100` are ignored
(masked), the loss is only computed for the tokens with labels in `[0, ..., config.vocab_size]`.
use_cache (`bool`, *optional*):
If set to `True`, `past_key_values` key value states are returned and can be used to speed up decoding
(see `past_key_values`).
- 1 for tokens that are **not masked**,
- 0 for tokens that are **masked**.
output_attentions (`bool`, *optional*):
Whether or not to return the attentions tensors of all attention layers. See `attentions` under
returned tensors for more detail.
output_hidden_states (`bool`, *optional*):
Whether or not to return the hidden states of all layers. See `hidden_states` under returned tensors
for more detail.
return_dict (`bool`, *optional*):
Whether or not to return a [`~utils.ModelOutput`] instead of a plain tuple.
Returns:
Example:
```python
>>> from transformers import AutoTokenizer, BartForCausalLM
>>> tokenizer = AutoTokenizer.from_pretrained("facebook/bart-base")
>>> model = BartForCausalLM.from_pretrained("facebook/bart-base", add_cross_attention=False)
>>> assert model.config.is_decoder, f"{model.__class__} has to be configured as a decoder."
>>> inputs = tokenizer("Hello, my dog is cute", return_tensors="pt")
>>> outputs = model(**inputs)
>>> logits = outputs.logits
>>> expected_shape = [1, inputs.input_ids.shape[-1], model.config.vocab_size]
>>> list(logits.shape) == expected_shape
True
```"""
output_attentions = output_attentions if output_attentions is not None else self.config.output_attentions
output_hidden_states = (
output_hidden_states if output_hidden_states is not None else self.config.output_hidden_states
)
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
# decoder outputs consists of (dec_features, layer_state, dec_hidden, dec_attn)
outputs = self.model.decoder(
input_ids=input_ids,
attention_mask=attention_mask,
encoder_hidden_states=encoder_hidden_states,
encoder_attention_mask=encoder_attention_mask,
head_mask=head_mask,
cross_attn_head_mask=cross_attn_head_mask,
past_key_values=past_key_values,
inputs_embeds=inputs_embeds,
use_cache=use_cache,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
logits = self.lm_head(outputs[0])
loss = None
if labels is not None:
labels = labels.to(logits.device)
loss_fct = CrossEntropyLoss()
loss = loss_fct(logits.view(-1, self.config.vocab_size), labels.view(-1))
if not return_dict:
output = (logits,) + outputs[1:]
return (loss,) + output if loss is not None else output
return CausalLMOutputWithCrossAttentions(
loss=loss,
logits=logits,
past_key_values=outputs.past_key_values,
hidden_states=outputs.hidden_states,
attentions=outputs.attentions,
cross_attentions=outputs.cross_attentions,
)
def prepare_inputs_for_generation(
self, input_ids, past_key_values=None, attention_mask=None, use_cache=None, **kwargs
):
# if model is used as a decoder in encoder-decoder model, the decoder attention mask is created on the fly
if attention_mask is None:
attention_mask = input_ids.new_ones(input_ids.shape)
if past_key_values:
input_ids = input_ids[:, -1:]
# first step, decoder_cached_states are empty
return {
"input_ids": input_ids, # encoder_outputs is defined. input_ids not needed
"attention_mask": attention_mask,
"past_key_values": past_key_values,
"use_cache": use_cache,
}
@staticmethod
def _reorder_cache(past_key_values, beam_idx):
reordered_past = ()
for layer_past in past_key_values:
reordered_past += (tuple(past_state.index_select(0, beam_idx) for past_state in layer_past),)
return reordered_past
| 90,105 | 45.374678 | 150 | py |
transformers | transformers-main/src/transformers/models/bart/__init__.py | # Copyright 2020 The HuggingFace Team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
from typing import TYPE_CHECKING
from ...utils import (
OptionalDependencyNotAvailable,
_LazyModule,
is_flax_available,
is_tf_available,
is_tokenizers_available,
is_torch_available,
)
_import_structure = {
"configuration_bart": ["BART_PRETRAINED_CONFIG_ARCHIVE_MAP", "BartConfig", "BartOnnxConfig"],
"tokenization_bart": ["BartTokenizer"],
}
try:
if not is_tokenizers_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
_import_structure["tokenization_bart_fast"] = ["BartTokenizerFast"]
try:
if not is_torch_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
_import_structure["modeling_bart"] = [
"BART_PRETRAINED_MODEL_ARCHIVE_LIST",
"BartForCausalLM",
"BartForConditionalGeneration",
"BartForQuestionAnswering",
"BartForSequenceClassification",
"BartModel",
"BartPretrainedModel",
"PretrainedBartModel",
]
try:
if not is_tf_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
_import_structure["modeling_tf_bart"] = [
"TFBartForConditionalGeneration",
"TFBartForSequenceClassification",
"TFBartModel",
"TFBartPretrainedModel",
]
try:
if not is_flax_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
_import_structure["modeling_flax_bart"] = [
"FlaxBartDecoderPreTrainedModel",
"FlaxBartForCausalLM",
"FlaxBartForConditionalGeneration",
"FlaxBartForQuestionAnswering",
"FlaxBartForSequenceClassification",
"FlaxBartModel",
"FlaxBartPreTrainedModel",
]
if TYPE_CHECKING:
from .configuration_bart import BART_PRETRAINED_CONFIG_ARCHIVE_MAP, BartConfig, BartOnnxConfig
from .tokenization_bart import BartTokenizer
try:
if not is_tokenizers_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
from .tokenization_bart_fast import BartTokenizerFast
try:
if not is_torch_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
from .modeling_bart import (
BART_PRETRAINED_MODEL_ARCHIVE_LIST,
BartForCausalLM,
BartForConditionalGeneration,
BartForQuestionAnswering,
BartForSequenceClassification,
BartModel,
BartPretrainedModel,
PretrainedBartModel,
)
try:
if not is_tf_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
from .modeling_tf_bart import (
TFBartForConditionalGeneration,
TFBartForSequenceClassification,
TFBartModel,
TFBartPretrainedModel,
)
try:
if not is_flax_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
from .modeling_flax_bart import (
FlaxBartDecoderPreTrainedModel,
FlaxBartForCausalLM,
FlaxBartForConditionalGeneration,
FlaxBartForQuestionAnswering,
FlaxBartForSequenceClassification,
FlaxBartModel,
FlaxBartPreTrainedModel,
)
else:
import sys
sys.modules[__name__] = _LazyModule(__name__, globals()["__file__"], _import_structure, module_spec=__spec__)
| 4,333 | 28.482993 | 113 | py |
transformers | transformers-main/src/transformers/models/deit/configuration_deit.py | # coding=utf-8
# Copyright 2021 Facebook AI Research (FAIR) and The HuggingFace Inc. team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
""" DeiT model configuration"""
from collections import OrderedDict
from typing import Mapping
from packaging import version
from ...configuration_utils import PretrainedConfig
from ...onnx import OnnxConfig
from ...utils import logging
logger = logging.get_logger(__name__)
DEIT_PRETRAINED_CONFIG_ARCHIVE_MAP = {
"facebook/deit-base-distilled-patch16-224": (
"https://huggingface.co/facebook/deit-base-patch16-224/resolve/main/config.json"
),
# See all DeiT models at https://huggingface.co/models?filter=deit
}
class DeiTConfig(PretrainedConfig):
r"""
This is the configuration class to store the configuration of a [`DeiTModel`]. It is used to instantiate an DeiT
model according to the specified arguments, defining the model architecture. Instantiating a configuration with the
defaults will yield a similar configuration to that of the DeiT
[facebook/deit-base-distilled-patch16-224](https://huggingface.co/facebook/deit-base-distilled-patch16-224)
architecture.
Configuration objects inherit from [`PretrainedConfig`] and can be used to control the model outputs. Read the
documentation from [`PretrainedConfig`] for more information.
Args:
hidden_size (`int`, *optional*, defaults to 768):
Dimensionality of the encoder layers and the pooler layer.
num_hidden_layers (`int`, *optional*, defaults to 12):
Number of hidden layers in the Transformer encoder.
num_attention_heads (`int`, *optional*, defaults to 12):
Number of attention heads for each attention layer in the Transformer encoder.
intermediate_size (`int`, *optional*, defaults to 3072):
Dimensionality of the "intermediate" (i.e., feed-forward) layer in the Transformer encoder.
hidden_act (`str` or `function`, *optional*, defaults to `"gelu"`):
The non-linear activation function (function or string) in the encoder and pooler. If string, `"gelu"`,
`"relu"`, `"selu"` and `"gelu_new"` are supported.
hidden_dropout_prob (`float`, *optional*, defaults to 0.1):
The dropout probabilitiy for all fully connected layers in the embeddings, encoder, and pooler.
attention_probs_dropout_prob (`float`, *optional*, defaults to 0.1):
The dropout ratio for the attention probabilities.
initializer_range (`float`, *optional*, defaults to 0.02):
The standard deviation of the truncated_normal_initializer for initializing all weight matrices.
layer_norm_eps (`float`, *optional*, defaults to 1e-12):
The epsilon used by the layer normalization layers.
image_size (`int`, *optional*, defaults to `224`):
The size (resolution) of each image.
patch_size (`int`, *optional*, defaults to `16`):
The size (resolution) of each patch.
num_channels (`int`, *optional*, defaults to `3`):
The number of input channels.
qkv_bias (`bool`, *optional*, defaults to `True`):
Whether to add a bias to the queries, keys and values.
encoder_stride (`int`, `optional`, defaults to 16):
Factor to increase the spatial resolution by in the decoder head for masked image modeling.
Example:
```python
>>> from transformers import DeiTConfig, DeiTModel
>>> # Initializing a DeiT deit-base-distilled-patch16-224 style configuration
>>> configuration = DeiTConfig()
>>> # Initializing a model (with random weights) from the deit-base-distilled-patch16-224 style configuration
>>> model = DeiTModel(configuration)
>>> # Accessing the model configuration
>>> configuration = model.config
```"""
model_type = "deit"
def __init__(
self,
hidden_size=768,
num_hidden_layers=12,
num_attention_heads=12,
intermediate_size=3072,
hidden_act="gelu",
hidden_dropout_prob=0.0,
attention_probs_dropout_prob=0.0,
initializer_range=0.02,
layer_norm_eps=1e-12,
image_size=224,
patch_size=16,
num_channels=3,
qkv_bias=True,
encoder_stride=16,
**kwargs,
):
super().__init__(**kwargs)
self.hidden_size = hidden_size
self.num_hidden_layers = num_hidden_layers
self.num_attention_heads = num_attention_heads
self.intermediate_size = intermediate_size
self.hidden_act = hidden_act
self.hidden_dropout_prob = hidden_dropout_prob
self.attention_probs_dropout_prob = attention_probs_dropout_prob
self.initializer_range = initializer_range
self.layer_norm_eps = layer_norm_eps
self.image_size = image_size
self.patch_size = patch_size
self.num_channels = num_channels
self.qkv_bias = qkv_bias
self.encoder_stride = encoder_stride
class DeiTOnnxConfig(OnnxConfig):
torch_onnx_minimum_version = version.parse("1.11")
@property
def inputs(self) -> Mapping[str, Mapping[int, str]]:
return OrderedDict(
[
("pixel_values", {0: "batch", 1: "num_channels", 2: "height", 3: "width"}),
]
)
@property
def atol_for_validation(self) -> float:
return 1e-4
| 5,961 | 39.835616 | 119 | py |
transformers | transformers-main/src/transformers/models/deit/modeling_tf_deit.py | # coding=utf-8
# Copyright 2022 Facebook AI Research (FAIR) and The HuggingFace Inc. team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
""" TensorFlow DeiT model."""
from __future__ import annotations
import collections.abc
import math
from dataclasses import dataclass
from typing import Optional, Tuple, Union
import tensorflow as tf
from ...activations_tf import get_tf_activation
from ...modeling_tf_outputs import (
TFBaseModelOutput,
TFBaseModelOutputWithPooling,
TFImageClassifierOutput,
TFMaskedImageModelingOutput,
)
from ...modeling_tf_utils import (
TFPreTrainedModel,
TFSequenceClassificationLoss,
get_initializer,
keras_serializable,
unpack_inputs,
)
from ...tf_utils import shape_list, stable_softmax
from ...utils import (
ModelOutput,
add_code_sample_docstrings,
add_start_docstrings,
add_start_docstrings_to_model_forward,
logging,
replace_return_docstrings,
)
from .configuration_deit import DeiTConfig
logger = logging.get_logger(__name__)
# General docstring
_CONFIG_FOR_DOC = "DeiTConfig"
# Base docstring
_CHECKPOINT_FOR_DOC = "facebook/deit-base-distilled-patch16-224"
_EXPECTED_OUTPUT_SHAPE = [1, 198, 768]
# Image classification docstring
_IMAGE_CLASS_CHECKPOINT = "facebook/deit-base-distilled-patch16-224"
_IMAGE_CLASS_EXPECTED_OUTPUT = "tabby, tabby cat"
TF_DEIT_PRETRAINED_MODEL_ARCHIVE_LIST = [
"facebook/deit-base-distilled-patch16-224",
# See all DeiT models at https://huggingface.co/models?filter=deit
]
@dataclass
class TFDeiTForImageClassificationWithTeacherOutput(ModelOutput):
"""
Output type of [`DeiTForImageClassificationWithTeacher`].
Args:
logits (`tf.Tensor` of shape `(batch_size, config.num_labels)`):
Prediction scores as the average of the cls_logits and distillation logits.
cls_logits (`tf.Tensor` of shape `(batch_size, config.num_labels)`):
Prediction scores of the classification head (i.e. the linear layer on top of the final hidden state of the
class token).
distillation_logits (`tf.Tensor` of shape `(batch_size, config.num_labels)`):
Prediction scores of the distillation head (i.e. the linear layer on top of the final hidden state of the
distillation token).
hidden_states (`tuple(tf.Tensor)`, *optional*, returned when `output_hidden_states=True` is passed or when `config.output_hidden_states=True`):
Tuple of `tf.Tensor` (one for the output of the embeddings + one for the output of each layer) of shape
`(batch_size, sequence_length, hidden_size)`. Hidden-states of the model at the output of each layer plus
the initial embedding outputs.
attentions (`tuple(tf.Tensor)`, *optional*, returned when `output_attentions=True` is passed or when `config.output_attentions=True`):
Tuple of `tf.Tensor` (one for each layer) of shape `(batch_size, num_heads, sequence_length,
sequence_length)`. Attentions weights after the attention softmax, used to compute the weighted average in
the self-attention heads.
"""
logits: tf.Tensor = None
cls_logits: tf.Tensor = None
distillation_logits: tf.Tensor = None
hidden_states: Tuple[tf.Tensor] | None = None
attentions: Tuple[tf.Tensor] | None = None
class TFDeiTEmbeddings(tf.keras.layers.Layer):
"""
Construct the CLS token, distillation token, position and patch embeddings. Optionally, also the mask token.
"""
def __init__(self, config: DeiTConfig, use_mask_token: bool = False, **kwargs) -> None:
super().__init__(**kwargs)
self.config = config
self.use_mask_token = use_mask_token
self.patch_embeddings = TFDeiTPatchEmbeddings(config=config, name="patch_embeddings")
self.dropout = tf.keras.layers.Dropout(config.hidden_dropout_prob, name="dropout")
def build(self, input_shape: tf.TensorShape):
self.cls_token = self.add_weight(
shape=(1, 1, self.config.hidden_size),
initializer=tf.keras.initializers.zeros(),
trainable=True,
name="cls_token",
)
self.distillation_token = self.add_weight(
shape=(1, 1, self.config.hidden_size),
initializer=tf.keras.initializers.zeros(),
trainable=True,
name="distillation_token",
)
self.mask_token = None
if self.use_mask_token:
self.mask_token = self.add_weight(
shape=(1, 1, self.config.hidden_size),
initializer=tf.keras.initializers.zeros(),
trainable=True,
name="mask_token",
)
num_patches = self.patch_embeddings.num_patches
self.position_embeddings = self.add_weight(
shape=(1, num_patches + 2, self.config.hidden_size),
initializer=tf.keras.initializers.zeros(),
trainable=True,
name="position_embeddings",
)
super().build(input_shape)
def call(
self, pixel_values: tf.Tensor, bool_masked_pos: tf.Tensor | None = None, training: bool = False
) -> tf.Tensor:
embeddings = self.patch_embeddings(pixel_values)
batch_size, seq_length, _ = shape_list(embeddings)
if bool_masked_pos is not None:
mask_tokens = tf.tile(self.mask_token, [batch_size, seq_length, 1])
# replace the masked visual tokens by mask_tokens
mask = tf.expand_dims(bool_masked_pos, axis=-1)
mask = tf.cast(mask, dtype=mask_tokens.dtype)
embeddings = embeddings * (1.0 - mask) + mask_tokens * mask
cls_tokens = tf.repeat(self.cls_token, repeats=batch_size, axis=0)
distillation_tokens = tf.repeat(self.distillation_token, repeats=batch_size, axis=0)
embeddings = tf.concat((cls_tokens, distillation_tokens, embeddings), axis=1)
embeddings = embeddings + self.position_embeddings
embeddings = self.dropout(embeddings, training=training)
return embeddings
class TFDeiTPatchEmbeddings(tf.keras.layers.Layer):
"""
This class turns `pixel_values` of shape `(batch_size, num_channels, height, width)` into the initial
`hidden_states` (patch embeddings) of shape `(batch_size, seq_length, hidden_size)` to be consumed by a
Transformer.
"""
def __init__(self, config: DeiTConfig, **kwargs) -> None:
super().__init__(**kwargs)
image_size, patch_size = config.image_size, config.patch_size
num_channels, hidden_size = config.num_channels, config.hidden_size
image_size = image_size if isinstance(image_size, collections.abc.Iterable) else (image_size, image_size)
patch_size = patch_size if isinstance(patch_size, collections.abc.Iterable) else (patch_size, patch_size)
num_patches = (image_size[1] // patch_size[1]) * (image_size[0] // patch_size[0])
self.image_size = image_size
self.patch_size = patch_size
self.num_channels = num_channels
self.num_patches = num_patches
self.projection = tf.keras.layers.Conv2D(
hidden_size, kernel_size=patch_size, strides=patch_size, name="projection"
)
def call(self, pixel_values: tf.Tensor) -> tf.Tensor:
batch_size, height, width, num_channels = shape_list(pixel_values)
if tf.executing_eagerly() and num_channels != self.num_channels:
raise ValueError(
"Make sure that the channel dimension of the pixel values match with the one set in the configuration."
)
if tf.executing_eagerly() and (height != self.image_size[0] or width != self.image_size[1]):
raise ValueError(
f"Input image size ({height}*{width}) doesn't match model ({self.image_size[0]}*{self.image_size[1]})."
)
x = self.projection(pixel_values)
batch_size, height, width, num_channels = shape_list(x)
x = tf.reshape(x, (batch_size, height * width, num_channels))
return x
# Copied from transformers.models.vit.modeling_tf_vit.TFViTSelfAttention with ViT->DeiT
class TFDeiTSelfAttention(tf.keras.layers.Layer):
def __init__(self, config: DeiTConfig, **kwargs):
super().__init__(**kwargs)
if config.hidden_size % config.num_attention_heads != 0:
raise ValueError(
f"The hidden size ({config.hidden_size}) is not a multiple of the number "
f"of attention heads ({config.num_attention_heads})"
)
self.num_attention_heads = config.num_attention_heads
self.attention_head_size = int(config.hidden_size / config.num_attention_heads)
self.all_head_size = self.num_attention_heads * self.attention_head_size
self.sqrt_att_head_size = math.sqrt(self.attention_head_size)
self.query = tf.keras.layers.Dense(
units=self.all_head_size, kernel_initializer=get_initializer(config.initializer_range), name="query"
)
self.key = tf.keras.layers.Dense(
units=self.all_head_size, kernel_initializer=get_initializer(config.initializer_range), name="key"
)
self.value = tf.keras.layers.Dense(
units=self.all_head_size, kernel_initializer=get_initializer(config.initializer_range), name="value"
)
self.dropout = tf.keras.layers.Dropout(rate=config.attention_probs_dropout_prob)
def transpose_for_scores(self, tensor: tf.Tensor, batch_size: int) -> tf.Tensor:
# Reshape from [batch_size, seq_length, all_head_size] to [batch_size, seq_length, num_attention_heads, attention_head_size]
tensor = tf.reshape(tensor=tensor, shape=(batch_size, -1, self.num_attention_heads, self.attention_head_size))
# Transpose the tensor from [batch_size, seq_length, num_attention_heads, attention_head_size] to [batch_size, num_attention_heads, seq_length, attention_head_size]
return tf.transpose(tensor, perm=[0, 2, 1, 3])
def call(
self,
hidden_states: tf.Tensor,
head_mask: tf.Tensor,
output_attentions: bool,
training: bool = False,
) -> Tuple[tf.Tensor]:
batch_size = shape_list(hidden_states)[0]
mixed_query_layer = self.query(inputs=hidden_states)
mixed_key_layer = self.key(inputs=hidden_states)
mixed_value_layer = self.value(inputs=hidden_states)
query_layer = self.transpose_for_scores(mixed_query_layer, batch_size)
key_layer = self.transpose_for_scores(mixed_key_layer, batch_size)
value_layer = self.transpose_for_scores(mixed_value_layer, batch_size)
# Take the dot product between "query" and "key" to get the raw attention scores.
# (batch size, num_heads, seq_len_q, seq_len_k)
attention_scores = tf.matmul(query_layer, key_layer, transpose_b=True)
dk = tf.cast(self.sqrt_att_head_size, dtype=attention_scores.dtype)
attention_scores = tf.divide(attention_scores, dk)
# Normalize the attention scores to probabilities.
attention_probs = stable_softmax(logits=attention_scores, axis=-1)
# This is actually dropping out entire tokens to attend to, which might
# seem a bit unusual, but is taken from the original Transformer paper.
attention_probs = self.dropout(inputs=attention_probs, training=training)
# Mask heads if we want to
if head_mask is not None:
attention_probs = tf.multiply(attention_probs, head_mask)
attention_output = tf.matmul(attention_probs, value_layer)
attention_output = tf.transpose(attention_output, perm=[0, 2, 1, 3])
# (batch_size, seq_len_q, all_head_size)
attention_output = tf.reshape(tensor=attention_output, shape=(batch_size, -1, self.all_head_size))
outputs = (attention_output, attention_probs) if output_attentions else (attention_output,)
return outputs
# Copied from transformers.models.vit.modeling_tf_vit.TFViTSelfOutput with ViT->DeiT
class TFDeiTSelfOutput(tf.keras.layers.Layer):
"""
The residual connection is defined in TFDeiTLayer instead of here (as is the case with other models), due to the
layernorm applied before each block.
"""
def __init__(self, config: DeiTConfig, **kwargs):
super().__init__(**kwargs)
self.dense = tf.keras.layers.Dense(
units=config.hidden_size, kernel_initializer=get_initializer(config.initializer_range), name="dense"
)
self.dropout = tf.keras.layers.Dropout(rate=config.hidden_dropout_prob)
def call(self, hidden_states: tf.Tensor, input_tensor: tf.Tensor, training: bool = False) -> tf.Tensor:
hidden_states = self.dense(inputs=hidden_states)
hidden_states = self.dropout(inputs=hidden_states, training=training)
return hidden_states
# Copied from transformers.models.vit.modeling_tf_vit.TFViTAttention with ViT->DeiT
class TFDeiTAttention(tf.keras.layers.Layer):
def __init__(self, config: DeiTConfig, **kwargs):
super().__init__(**kwargs)
self.self_attention = TFDeiTSelfAttention(config, name="attention")
self.dense_output = TFDeiTSelfOutput(config, name="output")
def prune_heads(self, heads):
raise NotImplementedError
def call(
self,
input_tensor: tf.Tensor,
head_mask: tf.Tensor,
output_attentions: bool,
training: bool = False,
) -> Tuple[tf.Tensor]:
self_outputs = self.self_attention(
hidden_states=input_tensor, head_mask=head_mask, output_attentions=output_attentions, training=training
)
attention_output = self.dense_output(
hidden_states=self_outputs[0], input_tensor=input_tensor, training=training
)
outputs = (attention_output,) + self_outputs[1:] # add attentions if we output them
return outputs
# Copied from transformers.models.vit.modeling_tf_vit.TFViTIntermediate with ViT->DeiT
class TFDeiTIntermediate(tf.keras.layers.Layer):
def __init__(self, config: DeiTConfig, **kwargs):
super().__init__(**kwargs)
self.dense = tf.keras.layers.Dense(
units=config.intermediate_size, kernel_initializer=get_initializer(config.initializer_range), name="dense"
)
if isinstance(config.hidden_act, str):
self.intermediate_act_fn = get_tf_activation(config.hidden_act)
else:
self.intermediate_act_fn = config.hidden_act
def call(self, hidden_states: tf.Tensor) -> tf.Tensor:
hidden_states = self.dense(inputs=hidden_states)
hidden_states = self.intermediate_act_fn(hidden_states)
return hidden_states
# Copied from transformers.models.vit.modeling_tf_vit.TFViTOutput with ViT->DeiT
class TFDeiTOutput(tf.keras.layers.Layer):
def __init__(self, config: DeiTConfig, **kwargs):
super().__init__(**kwargs)
self.dense = tf.keras.layers.Dense(
units=config.hidden_size, kernel_initializer=get_initializer(config.initializer_range), name="dense"
)
self.dropout = tf.keras.layers.Dropout(rate=config.hidden_dropout_prob)
def call(self, hidden_states: tf.Tensor, input_tensor: tf.Tensor, training: bool = False) -> tf.Tensor:
hidden_states = self.dense(inputs=hidden_states)
hidden_states = self.dropout(inputs=hidden_states, training=training)
hidden_states = hidden_states + input_tensor
return hidden_states
class TFDeiTLayer(tf.keras.layers.Layer):
"""This corresponds to the Block class in the timm implementation."""
def __init__(self, config: DeiTConfig, **kwargs):
super().__init__(**kwargs)
self.attention = TFDeiTAttention(config, name="attention")
self.intermediate = TFDeiTIntermediate(config, name="intermediate")
self.deit_output = TFDeiTOutput(config, name="output")
self.layernorm_before = tf.keras.layers.LayerNormalization(
epsilon=config.layer_norm_eps, name="layernorm_before"
)
self.layernorm_after = tf.keras.layers.LayerNormalization(
epsilon=config.layer_norm_eps, name="layernorm_after"
)
def call(
self,
hidden_states: tf.Tensor,
head_mask: tf.Tensor,
output_attentions: bool,
training: bool = False,
) -> Tuple[tf.Tensor]:
attention_outputs = self.attention(
# in DeiT, layernorm is applied before self-attention
input_tensor=self.layernorm_before(inputs=hidden_states, training=training),
head_mask=head_mask,
output_attentions=output_attentions,
training=training,
)
attention_output = attention_outputs[0]
# first residual connection
hidden_states = attention_output + hidden_states
# in DeiT, layernorm is also applied after self-attention
layer_output = self.layernorm_after(inputs=hidden_states, training=training)
intermediate_output = self.intermediate(hidden_states=layer_output, training=training)
# second residual connection is done here
layer_output = self.deit_output(
hidden_states=intermediate_output, input_tensor=hidden_states, training=training
)
outputs = (layer_output,) + attention_outputs[1:] # add attentions if we output them
return outputs
# Copied from transformers.models.vit.modeling_tf_vit.TFViTEncoder with ViT->DeiT
class TFDeiTEncoder(tf.keras.layers.Layer):
def __init__(self, config: DeiTConfig, **kwargs):
super().__init__(**kwargs)
self.layer = [TFDeiTLayer(config, name=f"layer_._{i}") for i in range(config.num_hidden_layers)]
def call(
self,
hidden_states: tf.Tensor,
head_mask: tf.Tensor,
output_attentions: bool,
output_hidden_states: bool,
return_dict: bool,
training: bool = False,
) -> Union[TFBaseModelOutput, Tuple[tf.Tensor]]:
all_hidden_states = () if output_hidden_states else None
all_attentions = () if output_attentions else None
for i, layer_module in enumerate(self.layer):
if output_hidden_states:
all_hidden_states = all_hidden_states + (hidden_states,)
layer_outputs = layer_module(
hidden_states=hidden_states,
head_mask=head_mask[i],
output_attentions=output_attentions,
training=training,
)
hidden_states = layer_outputs[0]
if output_attentions:
all_attentions = all_attentions + (layer_outputs[1],)
# Add last layer
if output_hidden_states:
all_hidden_states = all_hidden_states + (hidden_states,)
if not return_dict:
return tuple(v for v in [hidden_states, all_hidden_states, all_attentions] if v is not None)
return TFBaseModelOutput(
last_hidden_state=hidden_states, hidden_states=all_hidden_states, attentions=all_attentions
)
@keras_serializable
class TFDeiTMainLayer(tf.keras.layers.Layer):
config_class = DeiTConfig
def __init__(
self, config: DeiTConfig, add_pooling_layer: bool = True, use_mask_token: bool = False, **kwargs
) -> None:
super().__init__(**kwargs)
self.config = config
self.embeddings = TFDeiTEmbeddings(config, use_mask_token=use_mask_token, name="embeddings")
self.encoder = TFDeiTEncoder(config, name="encoder")
self.layernorm = tf.keras.layers.LayerNormalization(epsilon=config.layer_norm_eps, name="layernorm")
self.pooler = TFDeiTPooler(config, name="pooler") if add_pooling_layer else None
def get_input_embeddings(self) -> TFDeiTPatchEmbeddings:
return self.embeddings.patch_embeddings
def _prune_heads(self, heads_to_prune):
"""
Prunes heads of the model. heads_to_prune: dict of {layer_num: list of heads to prune in this layer} See base
class PreTrainedModel
"""
raise NotImplementedError
def get_head_mask(self, head_mask):
if head_mask is not None:
raise NotImplementedError
else:
head_mask = [None] * self.config.num_hidden_layers
return head_mask
@unpack_inputs
def call(
self,
pixel_values: tf.Tensor | None = None,
bool_masked_pos: tf.Tensor | None = None,
head_mask: tf.Tensor | None = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
training: bool = False,
) -> Union[TFBaseModelOutputWithPooling, Tuple[tf.Tensor, ...]]:
output_attentions = output_attentions if output_attentions is not None else self.config.output_attentions
output_hidden_states = (
output_hidden_states if output_hidden_states is not None else self.config.output_hidden_states
)
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
if pixel_values is None:
raise ValueError("You have to specify pixel_values")
# TF 2.0 image layers can't use NCHW format when running on CPU.
# (batch_size, num_channels, height, width) -> (batch_size, height, width, num_channels)
pixel_values = tf.transpose(pixel_values, (0, 2, 3, 1))
# Prepare head mask if needed
# 1.0 in head_mask indicate we keep the head
# attention_probs has shape bsz x n_heads x N x N
# input head_mask has shape [num_heads] or [num_hidden_layers x num_heads]
# and head_mask is converted to shape [num_hidden_layers x batch x num_heads x seq_length x seq_length]
head_mask = self.get_head_mask(head_mask)
embedding_output = self.embeddings(pixel_values, bool_masked_pos=bool_masked_pos, training=training)
encoder_outputs = self.encoder(
embedding_output,
head_mask=head_mask,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
training=training,
)
sequence_output = encoder_outputs[0]
sequence_output = self.layernorm(sequence_output, training=training)
pooled_output = self.pooler(sequence_output, training=training) if self.pooler is not None else None
if not return_dict:
head_outputs = (sequence_output, pooled_output) if pooled_output is not None else (sequence_output,)
return head_outputs + encoder_outputs[1:]
return TFBaseModelOutputWithPooling(
last_hidden_state=sequence_output,
pooler_output=pooled_output,
hidden_states=encoder_outputs.hidden_states,
attentions=encoder_outputs.attentions,
)
# Copied from transformers.models.vit.modeling_tf_vit.TFViTPreTrainedModel with ViT->DeiT all-casing
class TFDeiTPreTrainedModel(TFPreTrainedModel):
"""
An abstract class to handle weights initialization and a simple interface for downloading and loading pretrained
models.
"""
config_class = DeiTConfig
base_model_prefix = "deit"
main_input_name = "pixel_values"
DEIT_START_DOCSTRING = r"""
This model is a TensorFlow
[tf.keras.layers.Layer](https://www.tensorflow.org/api_docs/python/tf/keras/layers/Layer). Use it as a regular
TensorFlow Module and refer to the TensorFlow documentation for all matter related to general usage and behavior.
Parameters:
config ([`DeiTConfig`]): Model configuration class with all the parameters of the model.
Initializing with a config file does not load the weights associated with the model, only the
configuration. Check out the [`~PreTrainedModel.from_pretrained`] method to load the model weights.
"""
DEIT_INPUTS_DOCSTRING = r"""
Args:
pixel_values (`tf.Tensor` of shape `(batch_size, num_channels, height, width)`):
Pixel values. Pixel values can be obtained using [`AutoImageProcessor`]. See
[`DeiTImageProcessor.__call__`] for details.
head_mask (`tf.Tensor` of shape `(num_heads,)` or `(num_layers, num_heads)`, *optional*):
Mask to nullify selected heads of the self-attention modules. Mask values selected in `[0, 1]`:
- 1 indicates the head is **not masked**,
- 0 indicates the head is **masked**.
output_attentions (`bool`, *optional*):
Whether or not to return the attentions tensors of all attention layers. See `attentions` under returned
tensors for more detail.
output_hidden_states (`bool`, *optional*):
Whether or not to return the hidden states of all layers. See `hidden_states` under returned tensors for
more detail.
return_dict (`bool`, *optional*):
Whether or not to return a [`~utils.ModelOutput`] instead of a plain tuple.
"""
@add_start_docstrings(
"The bare DeiT Model transformer outputting raw hidden-states without any specific head on top.",
DEIT_START_DOCSTRING,
)
class TFDeiTModel(TFDeiTPreTrainedModel):
def __init__(
self, config: DeiTConfig, add_pooling_layer: bool = True, use_mask_token: bool = False, **kwargs
) -> None:
super().__init__(config, **kwargs)
self.deit = TFDeiTMainLayer(
config, add_pooling_layer=add_pooling_layer, use_mask_token=use_mask_token, name="deit"
)
@unpack_inputs
@add_start_docstrings_to_model_forward(DEIT_INPUTS_DOCSTRING)
@add_code_sample_docstrings(
checkpoint=_CHECKPOINT_FOR_DOC,
output_type=TFBaseModelOutputWithPooling,
config_class=_CONFIG_FOR_DOC,
modality="vision",
expected_output=_EXPECTED_OUTPUT_SHAPE,
)
def call(
self,
pixel_values: tf.Tensor | None = None,
bool_masked_pos: tf.Tensor | None = None,
head_mask: tf.Tensor | None = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
training: bool = False,
) -> Union[Tuple, TFBaseModelOutputWithPooling]:
outputs = self.deit(
pixel_values=pixel_values,
bool_masked_pos=bool_masked_pos,
head_mask=head_mask,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
training=training,
)
return outputs
# Copied from transformers.models.vit.modeling_tf_vit.TFViTPooler with ViT->DeiT
class TFDeiTPooler(tf.keras.layers.Layer):
def __init__(self, config: DeiTConfig, **kwargs):
super().__init__(**kwargs)
self.dense = tf.keras.layers.Dense(
units=config.hidden_size,
kernel_initializer=get_initializer(config.initializer_range),
activation="tanh",
name="dense",
)
def call(self, hidden_states: tf.Tensor) -> tf.Tensor:
# We "pool" the model by simply taking the hidden state corresponding
# to the first token.
first_token_tensor = hidden_states[:, 0]
pooled_output = self.dense(inputs=first_token_tensor)
return pooled_output
class TFDeitPixelShuffle(tf.keras.layers.Layer):
"""TF layer implementation of torch.nn.PixelShuffle"""
def __init__(self, upscale_factor: int, **kwargs) -> None:
super().__init__(**kwargs)
if not isinstance(upscale_factor, int) or upscale_factor < 2:
raise ValueError(f"upscale_factor must be an integer value >= 2 got {upscale_factor}")
self.upscale_factor = upscale_factor
def call(self, x: tf.Tensor) -> tf.Tensor:
hidden_states = x
batch_size, _, _, num_input_channels = shape_list(hidden_states)
block_size_squared = self.upscale_factor**2
output_depth = int(num_input_channels / block_size_squared)
# When the number of output channels >= 2, PyTorch's PixelShuffle and
# TF's depth_to_space differ in their output as the order of channels selected for combining
# is a permutation of the other c.f.
# https://stackoverflow.com/questions/68272502/tf-depth-to-space-not-same-as-torchs-pixelshuffle-when-output-channels-1
permutation = tf.constant(
[[i + j * block_size_squared for i in range(block_size_squared) for j in range(output_depth)]]
)
hidden_states = tf.gather(params=hidden_states, indices=tf.tile(permutation, [batch_size, 1]), batch_dims=-1)
hidden_states = tf.nn.depth_to_space(hidden_states, block_size=self.upscale_factor, data_format="NHWC")
return hidden_states
class TFDeitDecoder(tf.keras.layers.Layer):
def __init__(self, config: DeiTConfig, **kwargs) -> None:
super().__init__(**kwargs)
self.conv2d = tf.keras.layers.Conv2D(
filters=config.encoder_stride**2 * config.num_channels, kernel_size=1, name="0"
)
self.pixel_shuffle = TFDeitPixelShuffle(config.encoder_stride, name="1")
def call(self, inputs: tf.Tensor, training: bool = False) -> tf.Tensor:
hidden_states = inputs
hidden_states = self.conv2d(hidden_states)
hidden_states = self.pixel_shuffle(hidden_states)
return hidden_states
@add_start_docstrings(
"DeiT Model with a decoder on top for masked image modeling, as proposed in"
" [SimMIM](https://arxiv.org/abs/2111.09886).",
DEIT_START_DOCSTRING,
)
class TFDeiTForMaskedImageModeling(TFDeiTPreTrainedModel):
def __init__(self, config: DeiTConfig) -> None:
super().__init__(config)
self.deit = TFDeiTMainLayer(config, add_pooling_layer=False, use_mask_token=True, name="deit")
self.decoder = TFDeitDecoder(config, name="decoder")
@unpack_inputs
@add_start_docstrings_to_model_forward(DEIT_INPUTS_DOCSTRING)
@replace_return_docstrings(output_type=TFMaskedImageModelingOutput, config_class=_CONFIG_FOR_DOC)
def call(
self,
pixel_values: tf.Tensor | None = None,
bool_masked_pos: tf.Tensor | None = None,
head_mask: tf.Tensor | None = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
training: bool = False,
) -> Union[tuple, TFMaskedImageModelingOutput]:
r"""
bool_masked_pos (`tf.Tensor` of type bool and shape `(batch_size, num_patches)`):
Boolean masked positions. Indicates which patches are masked (1) and which aren't (0).
Returns:
Examples:
```python
>>> from transformers import AutoImageProcessor, TFDeiTForMaskedImageModeling
>>> import tensorflow as tf
>>> from PIL import Image
>>> import requests
>>> url = "http://images.cocodataset.org/val2017/000000039769.jpg"
>>> image = Image.open(requests.get(url, stream=True).raw)
>>> image_processor = AutoImageProcessor.from_pretrained("facebook/deit-base-distilled-patch16-224")
>>> model = TFDeiTForMaskedImageModeling.from_pretrained("facebook/deit-base-distilled-patch16-224")
>>> num_patches = (model.config.image_size // model.config.patch_size) ** 2
>>> pixel_values = image_processor(images=image, return_tensors="tf").pixel_values
>>> # create random boolean mask of shape (batch_size, num_patches)
>>> bool_masked_pos = tf.cast(tf.random.uniform((1, num_patches), minval=0, maxval=2, dtype=tf.int32), tf.bool)
>>> outputs = model(pixel_values, bool_masked_pos=bool_masked_pos)
>>> loss, reconstructed_pixel_values = outputs.loss, outputs.reconstruction
>>> list(reconstructed_pixel_values.shape)
[1, 3, 224, 224]
```"""
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
outputs = self.deit(
pixel_values,
bool_masked_pos=bool_masked_pos,
head_mask=head_mask,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
training=training,
)
sequence_output = outputs[0]
# Reshape to (batch_size, num_channels, height, width)
sequence_output = sequence_output[:, 1:-1]
batch_size, sequence_length, num_channels = shape_list(sequence_output)
height = width = int(sequence_length**0.5)
sequence_output = tf.reshape(sequence_output, (batch_size, height, width, num_channels))
# Reconstruct pixel values
reconstructed_pixel_values = self.decoder(sequence_output, training=training)
# TF 2.0 image layers can't use NCHW format when running on CPU, so intermediate layers use NHWC,
# including the The decoder. We transpose to compute the loss against the pixel values
# (batch_size, height, width, num_channels) -> (batch_size, num_channels, height, width)
reconstructed_pixel_values = tf.transpose(reconstructed_pixel_values, (0, 3, 1, 2))
masked_im_loss = None
if bool_masked_pos is not None:
size = self.config.image_size // self.config.patch_size
bool_masked_pos = tf.reshape(bool_masked_pos, (-1, size, size))
mask = tf.repeat(bool_masked_pos, self.config.patch_size, 1)
mask = tf.repeat(mask, self.config.patch_size, 2)
mask = tf.expand_dims(mask, 1)
mask = tf.cast(mask, tf.float32)
reconstruction_loss = tf.keras.losses.mean_absolute_error(
# Swap axes as metric calculation reduces over the final dimension
tf.transpose(pixel_values, (1, 2, 3, 0)),
tf.transpose(reconstructed_pixel_values, (1, 2, 3, 0)),
)
reconstruction_loss = tf.expand_dims(reconstruction_loss, 0)
total_loss = tf.reduce_sum(reconstruction_loss * mask)
num_masked_pixels = (tf.reduce_sum(mask) + 1e-5) * self.config.num_channels
masked_im_loss = total_loss / num_masked_pixels
masked_im_loss = tf.reshape(masked_im_loss, (1,))
if not return_dict:
output = (reconstructed_pixel_values,) + outputs[1:]
return ((masked_im_loss,) + output) if masked_im_loss is not None else output
return TFMaskedImageModelingOutput(
loss=masked_im_loss,
reconstruction=reconstructed_pixel_values,
hidden_states=outputs.hidden_states,
attentions=outputs.attentions,
)
@add_start_docstrings(
"""
DeiT Model transformer with an image classification head on top (a linear layer on top of the final hidden state of
the [CLS] token) e.g. for ImageNet.
""",
DEIT_START_DOCSTRING,
)
class TFDeiTForImageClassification(TFDeiTPreTrainedModel, TFSequenceClassificationLoss):
def __init__(self, config: DeiTConfig):
super().__init__(config)
self.num_labels = config.num_labels
self.deit = TFDeiTMainLayer(config, add_pooling_layer=False, name="deit")
# Classifier head
self.classifier = (
tf.keras.layers.Dense(config.num_labels, name="classifier")
if config.num_labels > 0
else tf.keras.layers.Activation("linear", name="classifier")
)
@unpack_inputs
@add_start_docstrings_to_model_forward(DEIT_INPUTS_DOCSTRING)
@replace_return_docstrings(output_type=TFImageClassifierOutput, config_class=_CONFIG_FOR_DOC)
def call(
self,
pixel_values: tf.Tensor | None = None,
head_mask: tf.Tensor | None = None,
labels: tf.Tensor | None = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
training: bool = False,
) -> Union[tf.Tensor, TFImageClassifierOutput]:
r"""
labels (`tf.Tensor` of shape `(batch_size,)`, *optional*):
Labels for computing the image classification/regression loss. Indices should be in `[0, ...,
config.num_labels - 1]`. If `config.num_labels == 1` a regression loss is computed (Mean-Square loss), If
`config.num_labels > 1` a classification loss is computed (Cross-Entropy).
Returns:
Examples:
```python
>>> from transformers import AutoImageProcessor, TFDeiTForImageClassification
>>> import tensorflow as tf
>>> from PIL import Image
>>> import requests
>>> tf.keras.utils.set_random_seed(3) # doctest: +IGNORE_RESULT
>>> url = "http://images.cocodataset.org/val2017/000000039769.jpg"
>>> image = Image.open(requests.get(url, stream=True).raw)
>>> # note: we are loading a TFDeiTForImageClassificationWithTeacher from the hub here,
>>> # so the head will be randomly initialized, hence the predictions will be random
>>> image_processor = AutoImageProcessor.from_pretrained("facebook/deit-base-distilled-patch16-224")
>>> model = TFDeiTForImageClassification.from_pretrained("facebook/deit-base-distilled-patch16-224")
>>> inputs = image_processor(images=image, return_tensors="tf")
>>> outputs = model(**inputs)
>>> logits = outputs.logits
>>> # model predicts one of the 1000 ImageNet classes
>>> predicted_class_idx = tf.math.argmax(logits, axis=-1)[0]
>>> print("Predicted class:", model.config.id2label[int(predicted_class_idx)])
Predicted class: little blue heron, Egretta caerulea
```"""
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
outputs = self.deit(
pixel_values,
head_mask=head_mask,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
training=training,
)
sequence_output = outputs[0]
logits = self.classifier(sequence_output[:, 0, :])
# we don't use the distillation token
loss = None if labels is None else self.hf_compute_loss(labels, logits)
if not return_dict:
output = (logits,) + outputs[1:]
return ((loss,) + output) if loss is not None else output
return TFImageClassifierOutput(
loss=loss,
logits=logits,
hidden_states=outputs.hidden_states,
attentions=outputs.attentions,
)
@add_start_docstrings(
"""
DeiT Model transformer with image classification heads on top (a linear layer on top of the final hidden state of
the [CLS] token and a linear layer on top of the final hidden state of the distillation token) e.g. for ImageNet.
.. warning::
This model supports inference-only. Fine-tuning with distillation (i.e. with a teacher) is not yet
supported.
""",
DEIT_START_DOCSTRING,
)
class TFDeiTForImageClassificationWithTeacher(TFDeiTPreTrainedModel):
def __init__(self, config: DeiTConfig) -> None:
super().__init__(config)
self.num_labels = config.num_labels
self.deit = TFDeiTMainLayer(config, add_pooling_layer=False, name="deit")
# Classifier heads
self.cls_classifier = (
tf.keras.layers.Dense(config.num_labels, name="cls_classifier")
if config.num_labels > 0
else tf.keras.layers.Activation("linear", name="cls_classifier")
)
self.distillation_classifier = (
tf.keras.layers.Dense(config.num_labels, name="distillation_classifier")
if config.num_labels > 0
else tf.keras.layers.Activation("linear", name="distillation_classifier")
)
@unpack_inputs
@add_start_docstrings_to_model_forward(DEIT_INPUTS_DOCSTRING)
@add_code_sample_docstrings(
checkpoint=_IMAGE_CLASS_CHECKPOINT,
output_type=TFDeiTForImageClassificationWithTeacherOutput,
config_class=_CONFIG_FOR_DOC,
expected_output=_IMAGE_CLASS_EXPECTED_OUTPUT,
)
def call(
self,
pixel_values: tf.Tensor | None = None,
head_mask: tf.Tensor | None = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
training: bool = False,
) -> Union[tuple, TFDeiTForImageClassificationWithTeacherOutput]:
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
outputs = self.deit(
pixel_values,
head_mask=head_mask,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
training=training,
)
sequence_output = outputs[0]
cls_logits = self.cls_classifier(sequence_output[:, 0, :])
distillation_logits = self.distillation_classifier(sequence_output[:, 1, :])
# during inference, return the average of both classifier predictions
logits = (cls_logits + distillation_logits) / 2
if not return_dict:
output = (logits, cls_logits, distillation_logits) + outputs[1:]
return output
return TFDeiTForImageClassificationWithTeacherOutput(
logits=logits,
cls_logits=cls_logits,
distillation_logits=distillation_logits,
hidden_states=outputs.hidden_states,
attentions=outputs.attentions,
)
| 42,421 | 41.37962 | 172 | py |
transformers | transformers-main/src/transformers/models/deit/convert_deit_timm_to_pytorch.py | # coding=utf-8
# Copyright 2021 The HuggingFace Inc. team.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
"""Convert DeiT distilled checkpoints from the timm library."""
import argparse
import json
from pathlib import Path
import requests
import timm
import torch
from huggingface_hub import hf_hub_download
from PIL import Image
from transformers import DeiTConfig, DeiTForImageClassificationWithTeacher, DeiTImageProcessor
from transformers.utils import logging
logging.set_verbosity_info()
logger = logging.get_logger(__name__)
# here we list all keys to be renamed (original name on the left, our name on the right)
def create_rename_keys(config, base_model=False):
rename_keys = []
for i in range(config.num_hidden_layers):
# encoder layers: output projection, 2 feedforward neural networks and 2 layernorms
rename_keys.append((f"blocks.{i}.norm1.weight", f"deit.encoder.layer.{i}.layernorm_before.weight"))
rename_keys.append((f"blocks.{i}.norm1.bias", f"deit.encoder.layer.{i}.layernorm_before.bias"))
rename_keys.append((f"blocks.{i}.attn.proj.weight", f"deit.encoder.layer.{i}.attention.output.dense.weight"))
rename_keys.append((f"blocks.{i}.attn.proj.bias", f"deit.encoder.layer.{i}.attention.output.dense.bias"))
rename_keys.append((f"blocks.{i}.norm2.weight", f"deit.encoder.layer.{i}.layernorm_after.weight"))
rename_keys.append((f"blocks.{i}.norm2.bias", f"deit.encoder.layer.{i}.layernorm_after.bias"))
rename_keys.append((f"blocks.{i}.mlp.fc1.weight", f"deit.encoder.layer.{i}.intermediate.dense.weight"))
rename_keys.append((f"blocks.{i}.mlp.fc1.bias", f"deit.encoder.layer.{i}.intermediate.dense.bias"))
rename_keys.append((f"blocks.{i}.mlp.fc2.weight", f"deit.encoder.layer.{i}.output.dense.weight"))
rename_keys.append((f"blocks.{i}.mlp.fc2.bias", f"deit.encoder.layer.{i}.output.dense.bias"))
# projection layer + position embeddings
rename_keys.extend(
[
("cls_token", "deit.embeddings.cls_token"),
("dist_token", "deit.embeddings.distillation_token"),
("patch_embed.proj.weight", "deit.embeddings.patch_embeddings.projection.weight"),
("patch_embed.proj.bias", "deit.embeddings.patch_embeddings.projection.bias"),
("pos_embed", "deit.embeddings.position_embeddings"),
]
)
if base_model:
# layernorm + pooler
rename_keys.extend(
[
("norm.weight", "layernorm.weight"),
("norm.bias", "layernorm.bias"),
("pre_logits.fc.weight", "pooler.dense.weight"),
("pre_logits.fc.bias", "pooler.dense.bias"),
]
)
# if just the base model, we should remove "deit" from all keys that start with "deit"
rename_keys = [(pair[0], pair[1][4:]) if pair[1].startswith("deit") else pair for pair in rename_keys]
else:
# layernorm + classification heads
rename_keys.extend(
[
("norm.weight", "deit.layernorm.weight"),
("norm.bias", "deit.layernorm.bias"),
("head.weight", "cls_classifier.weight"),
("head.bias", "cls_classifier.bias"),
("head_dist.weight", "distillation_classifier.weight"),
("head_dist.bias", "distillation_classifier.bias"),
]
)
return rename_keys
# we split up the matrix of each encoder layer into queries, keys and values
def read_in_q_k_v(state_dict, config, base_model=False):
for i in range(config.num_hidden_layers):
if base_model:
prefix = ""
else:
prefix = "deit."
# read in weights + bias of input projection layer (in timm, this is a single matrix + bias)
in_proj_weight = state_dict.pop(f"blocks.{i}.attn.qkv.weight")
in_proj_bias = state_dict.pop(f"blocks.{i}.attn.qkv.bias")
# next, add query, keys and values (in that order) to the state dict
state_dict[f"{prefix}encoder.layer.{i}.attention.attention.query.weight"] = in_proj_weight[
: config.hidden_size, :
]
state_dict[f"{prefix}encoder.layer.{i}.attention.attention.query.bias"] = in_proj_bias[: config.hidden_size]
state_dict[f"{prefix}encoder.layer.{i}.attention.attention.key.weight"] = in_proj_weight[
config.hidden_size : config.hidden_size * 2, :
]
state_dict[f"{prefix}encoder.layer.{i}.attention.attention.key.bias"] = in_proj_bias[
config.hidden_size : config.hidden_size * 2
]
state_dict[f"{prefix}encoder.layer.{i}.attention.attention.value.weight"] = in_proj_weight[
-config.hidden_size :, :
]
state_dict[f"{prefix}encoder.layer.{i}.attention.attention.value.bias"] = in_proj_bias[-config.hidden_size :]
def rename_key(dct, old, new):
val = dct.pop(old)
dct[new] = val
# We will verify our results on an image of cute cats
def prepare_img():
url = "http://images.cocodataset.org/val2017/000000039769.jpg"
im = Image.open(requests.get(url, stream=True).raw)
return im
@torch.no_grad()
def convert_deit_checkpoint(deit_name, pytorch_dump_folder_path):
"""
Copy/paste/tweak model's weights to our DeiT structure.
"""
# define default DeiT configuration
config = DeiTConfig()
# all deit models have fine-tuned heads
base_model = False
# dataset (fine-tuned on ImageNet 2012), patch_size and image_size
config.num_labels = 1000
repo_id = "huggingface/label-files"
filename = "imagenet-1k-id2label.json"
id2label = json.load(open(hf_hub_download(repo_id, filename, repo_type="dataset"), "r"))
id2label = {int(k): v for k, v in id2label.items()}
config.id2label = id2label
config.label2id = {v: k for k, v in id2label.items()}
config.patch_size = int(deit_name[-6:-4])
config.image_size = int(deit_name[-3:])
# size of the architecture
if deit_name[9:].startswith("tiny"):
config.hidden_size = 192
config.intermediate_size = 768
config.num_hidden_layers = 12
config.num_attention_heads = 3
elif deit_name[9:].startswith("small"):
config.hidden_size = 384
config.intermediate_size = 1536
config.num_hidden_layers = 12
config.num_attention_heads = 6
if deit_name[9:].startswith("base"):
pass
elif deit_name[4:].startswith("large"):
config.hidden_size = 1024
config.intermediate_size = 4096
config.num_hidden_layers = 24
config.num_attention_heads = 16
# load original model from timm
timm_model = timm.create_model(deit_name, pretrained=True)
timm_model.eval()
# load state_dict of original model, remove and rename some keys
state_dict = timm_model.state_dict()
rename_keys = create_rename_keys(config, base_model)
for src, dest in rename_keys:
rename_key(state_dict, src, dest)
read_in_q_k_v(state_dict, config, base_model)
# load HuggingFace model
model = DeiTForImageClassificationWithTeacher(config).eval()
model.load_state_dict(state_dict)
# Check outputs on an image, prepared by DeiTImageProcessor
size = int(
(256 / 224) * config.image_size
) # to maintain same ratio w.r.t. 224 images, see https://github.com/facebookresearch/deit/blob/ab5715372db8c6cad5740714b2216d55aeae052e/datasets.py#L103
image_processor = DeiTImageProcessor(size=size, crop_size=config.image_size)
encoding = image_processor(images=prepare_img(), return_tensors="pt")
pixel_values = encoding["pixel_values"]
outputs = model(pixel_values)
timm_logits = timm_model(pixel_values)
assert timm_logits.shape == outputs.logits.shape
assert torch.allclose(timm_logits, outputs.logits, atol=1e-3)
Path(pytorch_dump_folder_path).mkdir(exist_ok=True)
print(f"Saving model {deit_name} to {pytorch_dump_folder_path}")
model.save_pretrained(pytorch_dump_folder_path)
print(f"Saving image processor to {pytorch_dump_folder_path}")
image_processor.save_pretrained(pytorch_dump_folder_path)
if __name__ == "__main__":
parser = argparse.ArgumentParser()
# Required parameters
parser.add_argument(
"--deit_name",
default="vit_deit_base_distilled_patch16_224",
type=str,
help="Name of the DeiT timm model you'd like to convert.",
)
parser.add_argument(
"--pytorch_dump_folder_path", default=None, type=str, help="Path to the output PyTorch model directory."
)
args = parser.parse_args()
convert_deit_checkpoint(args.deit_name, args.pytorch_dump_folder_path)
| 9,217 | 40.9 | 158 | py |
transformers | transformers-main/src/transformers/models/deit/modeling_deit.py | # coding=utf-8
# Copyright 2021 Facebook AI Research (FAIR), Ross Wightman, The HuggingFace Inc. team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
""" PyTorch DeiT model."""
import collections.abc
import math
from dataclasses import dataclass
from typing import Optional, Set, Tuple, Union
import torch
import torch.utils.checkpoint
from torch import nn
from torch.nn import BCEWithLogitsLoss, CrossEntropyLoss, MSELoss
from ...activations import ACT2FN
from ...modeling_outputs import (
BaseModelOutput,
BaseModelOutputWithPooling,
ImageClassifierOutput,
MaskedImageModelingOutput,
)
from ...modeling_utils import PreTrainedModel
from ...pytorch_utils import find_pruneable_heads_and_indices, prune_linear_layer
from ...utils import (
ModelOutput,
add_code_sample_docstrings,
add_start_docstrings,
add_start_docstrings_to_model_forward,
logging,
replace_return_docstrings,
)
from .configuration_deit import DeiTConfig
logger = logging.get_logger(__name__)
# General docstring
_CONFIG_FOR_DOC = "DeiTConfig"
# Base docstring
_CHECKPOINT_FOR_DOC = "facebook/deit-base-distilled-patch16-224"
_EXPECTED_OUTPUT_SHAPE = [1, 198, 768]
# Image classification docstring
_IMAGE_CLASS_CHECKPOINT = "facebook/deit-base-distilled-patch16-224"
_IMAGE_CLASS_EXPECTED_OUTPUT = "tabby, tabby cat"
DEIT_PRETRAINED_MODEL_ARCHIVE_LIST = [
"facebook/deit-base-distilled-patch16-224",
# See all DeiT models at https://huggingface.co/models?filter=deit
]
class DeiTEmbeddings(nn.Module):
"""
Construct the CLS token, distillation token, position and patch embeddings. Optionally, also the mask token.
"""
def __init__(self, config: DeiTConfig, use_mask_token: bool = False) -> None:
super().__init__()
self.cls_token = nn.Parameter(torch.zeros(1, 1, config.hidden_size))
self.distillation_token = nn.Parameter(torch.zeros(1, 1, config.hidden_size))
self.mask_token = nn.Parameter(torch.zeros(1, 1, config.hidden_size)) if use_mask_token else None
self.patch_embeddings = DeiTPatchEmbeddings(config)
num_patches = self.patch_embeddings.num_patches
self.position_embeddings = nn.Parameter(torch.zeros(1, num_patches + 2, config.hidden_size))
self.dropout = nn.Dropout(config.hidden_dropout_prob)
def forward(self, pixel_values: torch.Tensor, bool_masked_pos: Optional[torch.BoolTensor] = None) -> torch.Tensor:
embeddings = self.patch_embeddings(pixel_values)
batch_size, seq_length, _ = embeddings.size()
if bool_masked_pos is not None:
mask_tokens = self.mask_token.expand(batch_size, seq_length, -1)
# replace the masked visual tokens by mask_tokens
mask = bool_masked_pos.unsqueeze(-1).type_as(mask_tokens)
embeddings = embeddings * (1.0 - mask) + mask_tokens * mask
cls_tokens = self.cls_token.expand(batch_size, -1, -1)
distillation_tokens = self.distillation_token.expand(batch_size, -1, -1)
embeddings = torch.cat((cls_tokens, distillation_tokens, embeddings), dim=1)
embeddings = embeddings + self.position_embeddings
embeddings = self.dropout(embeddings)
return embeddings
class DeiTPatchEmbeddings(nn.Module):
"""
This class turns `pixel_values` of shape `(batch_size, num_channels, height, width)` into the initial
`hidden_states` (patch embeddings) of shape `(batch_size, seq_length, hidden_size)` to be consumed by a
Transformer.
"""
def __init__(self, config):
super().__init__()
image_size, patch_size = config.image_size, config.patch_size
num_channels, hidden_size = config.num_channels, config.hidden_size
image_size = image_size if isinstance(image_size, collections.abc.Iterable) else (image_size, image_size)
patch_size = patch_size if isinstance(patch_size, collections.abc.Iterable) else (patch_size, patch_size)
num_patches = (image_size[1] // patch_size[1]) * (image_size[0] // patch_size[0])
self.image_size = image_size
self.patch_size = patch_size
self.num_channels = num_channels
self.num_patches = num_patches
self.projection = nn.Conv2d(num_channels, hidden_size, kernel_size=patch_size, stride=patch_size)
def forward(self, pixel_values: torch.Tensor) -> torch.Tensor:
batch_size, num_channels, height, width = pixel_values.shape
if num_channels != self.num_channels:
raise ValueError(
"Make sure that the channel dimension of the pixel values match with the one set in the configuration."
)
if height != self.image_size[0] or width != self.image_size[1]:
raise ValueError(
f"Input image size ({height}*{width}) doesn't match model ({self.image_size[0]}*{self.image_size[1]})."
)
x = self.projection(pixel_values).flatten(2).transpose(1, 2)
return x
# Copied from transformers.models.vit.modeling_vit.ViTSelfAttention with ViT->DeiT
class DeiTSelfAttention(nn.Module):
def __init__(self, config: DeiTConfig) -> None:
super().__init__()
if config.hidden_size % config.num_attention_heads != 0 and not hasattr(config, "embedding_size"):
raise ValueError(
f"The hidden size {config.hidden_size,} is not a multiple of the number of attention "
f"heads {config.num_attention_heads}."
)
self.num_attention_heads = config.num_attention_heads
self.attention_head_size = int(config.hidden_size / config.num_attention_heads)
self.all_head_size = self.num_attention_heads * self.attention_head_size
self.query = nn.Linear(config.hidden_size, self.all_head_size, bias=config.qkv_bias)
self.key = nn.Linear(config.hidden_size, self.all_head_size, bias=config.qkv_bias)
self.value = nn.Linear(config.hidden_size, self.all_head_size, bias=config.qkv_bias)
self.dropout = nn.Dropout(config.attention_probs_dropout_prob)
def transpose_for_scores(self, x: torch.Tensor) -> torch.Tensor:
new_x_shape = x.size()[:-1] + (self.num_attention_heads, self.attention_head_size)
x = x.view(new_x_shape)
return x.permute(0, 2, 1, 3)
def forward(
self, hidden_states, head_mask: Optional[torch.Tensor] = None, output_attentions: bool = False
) -> Union[Tuple[torch.Tensor, torch.Tensor], Tuple[torch.Tensor]]:
mixed_query_layer = self.query(hidden_states)
key_layer = self.transpose_for_scores(self.key(hidden_states))
value_layer = self.transpose_for_scores(self.value(hidden_states))
query_layer = self.transpose_for_scores(mixed_query_layer)
# Take the dot product between "query" and "key" to get the raw attention scores.
attention_scores = torch.matmul(query_layer, key_layer.transpose(-1, -2))
attention_scores = attention_scores / math.sqrt(self.attention_head_size)
# Normalize the attention scores to probabilities.
attention_probs = nn.functional.softmax(attention_scores, dim=-1)
# This is actually dropping out entire tokens to attend to, which might
# seem a bit unusual, but is taken from the original Transformer paper.
attention_probs = self.dropout(attention_probs)
# Mask heads if we want to
if head_mask is not None:
attention_probs = attention_probs * head_mask
context_layer = torch.matmul(attention_probs, value_layer)
context_layer = context_layer.permute(0, 2, 1, 3).contiguous()
new_context_layer_shape = context_layer.size()[:-2] + (self.all_head_size,)
context_layer = context_layer.view(new_context_layer_shape)
outputs = (context_layer, attention_probs) if output_attentions else (context_layer,)
return outputs
# Copied from transformers.models.vit.modeling_vit.ViTSelfOutput with ViT->DeiT
class DeiTSelfOutput(nn.Module):
"""
The residual connection is defined in DeiTLayer instead of here (as is the case with other models), due to the
layernorm applied before each block.
"""
def __init__(self, config: DeiTConfig) -> None:
super().__init__()
self.dense = nn.Linear(config.hidden_size, config.hidden_size)
self.dropout = nn.Dropout(config.hidden_dropout_prob)
def forward(self, hidden_states: torch.Tensor, input_tensor: torch.Tensor) -> torch.Tensor:
hidden_states = self.dense(hidden_states)
hidden_states = self.dropout(hidden_states)
return hidden_states
# Copied from transformers.models.vit.modeling_vit.ViTAttention with ViT->DeiT
class DeiTAttention(nn.Module):
def __init__(self, config: DeiTConfig) -> None:
super().__init__()
self.attention = DeiTSelfAttention(config)
self.output = DeiTSelfOutput(config)
self.pruned_heads = set()
def prune_heads(self, heads: Set[int]) -> None:
if len(heads) == 0:
return
heads, index = find_pruneable_heads_and_indices(
heads, self.attention.num_attention_heads, self.attention.attention_head_size, self.pruned_heads
)
# Prune linear layers
self.attention.query = prune_linear_layer(self.attention.query, index)
self.attention.key = prune_linear_layer(self.attention.key, index)
self.attention.value = prune_linear_layer(self.attention.value, index)
self.output.dense = prune_linear_layer(self.output.dense, index, dim=1)
# Update hyper params and store pruned heads
self.attention.num_attention_heads = self.attention.num_attention_heads - len(heads)
self.attention.all_head_size = self.attention.attention_head_size * self.attention.num_attention_heads
self.pruned_heads = self.pruned_heads.union(heads)
def forward(
self,
hidden_states: torch.Tensor,
head_mask: Optional[torch.Tensor] = None,
output_attentions: bool = False,
) -> Union[Tuple[torch.Tensor, torch.Tensor], Tuple[torch.Tensor]]:
self_outputs = self.attention(hidden_states, head_mask, output_attentions)
attention_output = self.output(self_outputs[0], hidden_states)
outputs = (attention_output,) + self_outputs[1:] # add attentions if we output them
return outputs
# Copied from transformers.models.vit.modeling_vit.ViTIntermediate with ViT->DeiT
class DeiTIntermediate(nn.Module):
def __init__(self, config: DeiTConfig) -> None:
super().__init__()
self.dense = nn.Linear(config.hidden_size, config.intermediate_size)
if isinstance(config.hidden_act, str):
self.intermediate_act_fn = ACT2FN[config.hidden_act]
else:
self.intermediate_act_fn = config.hidden_act
def forward(self, hidden_states: torch.Tensor) -> torch.Tensor:
hidden_states = self.dense(hidden_states)
hidden_states = self.intermediate_act_fn(hidden_states)
return hidden_states
# Copied from transformers.models.vit.modeling_vit.ViTOutput with ViT->DeiT
class DeiTOutput(nn.Module):
def __init__(self, config: DeiTConfig) -> None:
super().__init__()
self.dense = nn.Linear(config.intermediate_size, config.hidden_size)
self.dropout = nn.Dropout(config.hidden_dropout_prob)
def forward(self, hidden_states: torch.Tensor, input_tensor: torch.Tensor) -> torch.Tensor:
hidden_states = self.dense(hidden_states)
hidden_states = self.dropout(hidden_states)
hidden_states = hidden_states + input_tensor
return hidden_states
# Copied from transformers.models.vit.modeling_vit.ViTLayer with ViT->DeiT
class DeiTLayer(nn.Module):
"""This corresponds to the Block class in the timm implementation."""
def __init__(self, config: DeiTConfig) -> None:
super().__init__()
self.chunk_size_feed_forward = config.chunk_size_feed_forward
self.seq_len_dim = 1
self.attention = DeiTAttention(config)
self.intermediate = DeiTIntermediate(config)
self.output = DeiTOutput(config)
self.layernorm_before = nn.LayerNorm(config.hidden_size, eps=config.layer_norm_eps)
self.layernorm_after = nn.LayerNorm(config.hidden_size, eps=config.layer_norm_eps)
def forward(
self,
hidden_states: torch.Tensor,
head_mask: Optional[torch.Tensor] = None,
output_attentions: bool = False,
) -> Union[Tuple[torch.Tensor, torch.Tensor], Tuple[torch.Tensor]]:
self_attention_outputs = self.attention(
self.layernorm_before(hidden_states), # in DeiT, layernorm is applied before self-attention
head_mask,
output_attentions=output_attentions,
)
attention_output = self_attention_outputs[0]
outputs = self_attention_outputs[1:] # add self attentions if we output attention weights
# first residual connection
hidden_states = attention_output + hidden_states
# in DeiT, layernorm is also applied after self-attention
layer_output = self.layernorm_after(hidden_states)
layer_output = self.intermediate(layer_output)
# second residual connection is done here
layer_output = self.output(layer_output, hidden_states)
outputs = (layer_output,) + outputs
return outputs
# Copied from transformers.models.vit.modeling_vit.ViTEncoder with ViT->DeiT
class DeiTEncoder(nn.Module):
def __init__(self, config: DeiTConfig) -> None:
super().__init__()
self.config = config
self.layer = nn.ModuleList([DeiTLayer(config) for _ in range(config.num_hidden_layers)])
self.gradient_checkpointing = False
def forward(
self,
hidden_states: torch.Tensor,
head_mask: Optional[torch.Tensor] = None,
output_attentions: bool = False,
output_hidden_states: bool = False,
return_dict: bool = True,
) -> Union[tuple, BaseModelOutput]:
all_hidden_states = () if output_hidden_states else None
all_self_attentions = () if output_attentions else None
for i, layer_module in enumerate(self.layer):
if output_hidden_states:
all_hidden_states = all_hidden_states + (hidden_states,)
layer_head_mask = head_mask[i] if head_mask is not None else None
if self.gradient_checkpointing and self.training:
def create_custom_forward(module):
def custom_forward(*inputs):
return module(*inputs, output_attentions)
return custom_forward
layer_outputs = torch.utils.checkpoint.checkpoint(
create_custom_forward(layer_module),
hidden_states,
layer_head_mask,
)
else:
layer_outputs = layer_module(hidden_states, layer_head_mask, output_attentions)
hidden_states = layer_outputs[0]
if output_attentions:
all_self_attentions = all_self_attentions + (layer_outputs[1],)
if output_hidden_states:
all_hidden_states = all_hidden_states + (hidden_states,)
if not return_dict:
return tuple(v for v in [hidden_states, all_hidden_states, all_self_attentions] if v is not None)
return BaseModelOutput(
last_hidden_state=hidden_states,
hidden_states=all_hidden_states,
attentions=all_self_attentions,
)
class DeiTPreTrainedModel(PreTrainedModel):
"""
An abstract class to handle weights initialization and a simple interface for downloading and loading pretrained
models.
"""
config_class = DeiTConfig
base_model_prefix = "deit"
main_input_name = "pixel_values"
supports_gradient_checkpointing = True
_no_split_modules = []
def _init_weights(self, module: Union[nn.Linear, nn.Conv2d, nn.LayerNorm]) -> None:
"""Initialize the weights"""
if isinstance(module, (nn.Linear, nn.Conv2d)):
# Upcast the input in `fp32` and cast it back to desired `dtype` to avoid
# `trunc_normal_cpu` not implemented in `half` issues
module.weight.data = nn.init.trunc_normal_(
module.weight.data.to(torch.float32), mean=0.0, std=self.config.initializer_range
).to(module.weight.dtype)
if module.bias is not None:
module.bias.data.zero_()
elif isinstance(module, nn.LayerNorm):
module.bias.data.zero_()
module.weight.data.fill_(1.0)
def _set_gradient_checkpointing(self, module: DeiTEncoder, value: bool = False) -> None:
if isinstance(module, DeiTEncoder):
module.gradient_checkpointing = value
DEIT_START_DOCSTRING = r"""
This model is a PyTorch [torch.nn.Module](https://pytorch.org/docs/stable/nn.html#torch.nn.Module) subclass. Use it
as a regular PyTorch Module and refer to the PyTorch documentation for all matter related to general usage and
behavior.
Parameters:
config ([`DeiTConfig`]): Model configuration class with all the parameters of the model.
Initializing with a config file does not load the weights associated with the model, only the
configuration. Check out the [`~PreTrainedModel.from_pretrained`] method to load the model weights.
"""
DEIT_INPUTS_DOCSTRING = r"""
Args:
pixel_values (`torch.FloatTensor` of shape `(batch_size, num_channels, height, width)`):
Pixel values. Pixel values can be obtained using [`AutoImageProcessor`]. See
[`DeiTImageProcessor.__call__`] for details.
head_mask (`torch.FloatTensor` of shape `(num_heads,)` or `(num_layers, num_heads)`, *optional*):
Mask to nullify selected heads of the self-attention modules. Mask values selected in `[0, 1]`:
- 1 indicates the head is **not masked**,
- 0 indicates the head is **masked**.
output_attentions (`bool`, *optional*):
Whether or not to return the attentions tensors of all attention layers. See `attentions` under returned
tensors for more detail.
output_hidden_states (`bool`, *optional*):
Whether or not to return the hidden states of all layers. See `hidden_states` under returned tensors for
more detail.
return_dict (`bool`, *optional*):
Whether or not to return a [`~utils.ModelOutput`] instead of a plain tuple.
"""
@add_start_docstrings(
"The bare DeiT Model transformer outputting raw hidden-states without any specific head on top.",
DEIT_START_DOCSTRING,
)
class DeiTModel(DeiTPreTrainedModel):
def __init__(self, config: DeiTConfig, add_pooling_layer: bool = True, use_mask_token: bool = False) -> None:
super().__init__(config)
self.config = config
self.embeddings = DeiTEmbeddings(config, use_mask_token=use_mask_token)
self.encoder = DeiTEncoder(config)
self.layernorm = nn.LayerNorm(config.hidden_size, eps=config.layer_norm_eps)
self.pooler = DeiTPooler(config) if add_pooling_layer else None
# Initialize weights and apply final processing
self.post_init()
def get_input_embeddings(self) -> DeiTPatchEmbeddings:
return self.embeddings.patch_embeddings
def _prune_heads(self, heads_to_prune):
"""
Prunes heads of the model. heads_to_prune: dict of {layer_num: list of heads to prune in this layer} See base
class PreTrainedModel
"""
for layer, heads in heads_to_prune.items():
self.encoder.layer[layer].attention.prune_heads(heads)
@add_start_docstrings_to_model_forward(DEIT_INPUTS_DOCSTRING)
@add_code_sample_docstrings(
checkpoint=_CHECKPOINT_FOR_DOC,
output_type=BaseModelOutputWithPooling,
config_class=_CONFIG_FOR_DOC,
modality="vision",
expected_output=_EXPECTED_OUTPUT_SHAPE,
)
def forward(
self,
pixel_values: Optional[torch.Tensor] = None,
bool_masked_pos: Optional[torch.BoolTensor] = None,
head_mask: Optional[torch.Tensor] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[Tuple, BaseModelOutputWithPooling]:
r"""
bool_masked_pos (`torch.BoolTensor` of shape `(batch_size, num_patches)`, *optional*):
Boolean masked positions. Indicates which patches are masked (1) and which aren't (0).
"""
output_attentions = output_attentions if output_attentions is not None else self.config.output_attentions
output_hidden_states = (
output_hidden_states if output_hidden_states is not None else self.config.output_hidden_states
)
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
if pixel_values is None:
raise ValueError("You have to specify pixel_values")
# Prepare head mask if needed
# 1.0 in head_mask indicate we keep the head
# attention_probs has shape bsz x n_heads x N x N
# input head_mask has shape [num_heads] or [num_hidden_layers x num_heads]
# and head_mask is converted to shape [num_hidden_layers x batch x num_heads x seq_length x seq_length]
head_mask = self.get_head_mask(head_mask, self.config.num_hidden_layers)
# TODO: maybe have a cleaner way to cast the input (from `ImageProcessor` side?)
expected_dtype = self.embeddings.patch_embeddings.projection.weight.dtype
if pixel_values.dtype != expected_dtype:
pixel_values = pixel_values.to(expected_dtype)
embedding_output = self.embeddings(pixel_values, bool_masked_pos=bool_masked_pos)
encoder_outputs = self.encoder(
embedding_output,
head_mask=head_mask,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
sequence_output = encoder_outputs[0]
sequence_output = self.layernorm(sequence_output)
pooled_output = self.pooler(sequence_output) if self.pooler is not None else None
if not return_dict:
head_outputs = (sequence_output, pooled_output) if pooled_output is not None else (sequence_output,)
return head_outputs + encoder_outputs[1:]
return BaseModelOutputWithPooling(
last_hidden_state=sequence_output,
pooler_output=pooled_output,
hidden_states=encoder_outputs.hidden_states,
attentions=encoder_outputs.attentions,
)
# Copied from transformers.models.vit.modeling_vit.ViTPooler with ViT->DeiT
class DeiTPooler(nn.Module):
def __init__(self, config: DeiTConfig):
super().__init__()
self.dense = nn.Linear(config.hidden_size, config.hidden_size)
self.activation = nn.Tanh()
def forward(self, hidden_states):
# We "pool" the model by simply taking the hidden state corresponding
# to the first token.
first_token_tensor = hidden_states[:, 0]
pooled_output = self.dense(first_token_tensor)
pooled_output = self.activation(pooled_output)
return pooled_output
@add_start_docstrings(
"""DeiT Model with a decoder on top for masked image modeling, as proposed in [SimMIM](https://arxiv.org/abs/2111.09886).
<Tip>
Note that we provide a script to pre-train this model on custom data in our [examples
directory](https://github.com/huggingface/transformers/tree/main/examples/pytorch/image-pretraining).
</Tip>
""",
DEIT_START_DOCSTRING,
)
class DeiTForMaskedImageModeling(DeiTPreTrainedModel):
def __init__(self, config: DeiTConfig) -> None:
super().__init__(config)
self.deit = DeiTModel(config, add_pooling_layer=False, use_mask_token=True)
self.decoder = nn.Sequential(
nn.Conv2d(
in_channels=config.hidden_size,
out_channels=config.encoder_stride**2 * config.num_channels,
kernel_size=1,
),
nn.PixelShuffle(config.encoder_stride),
)
# Initialize weights and apply final processing
self.post_init()
@add_start_docstrings_to_model_forward(DEIT_INPUTS_DOCSTRING)
@replace_return_docstrings(output_type=MaskedImageModelingOutput, config_class=_CONFIG_FOR_DOC)
def forward(
self,
pixel_values: Optional[torch.Tensor] = None,
bool_masked_pos: Optional[torch.BoolTensor] = None,
head_mask: Optional[torch.Tensor] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[tuple, MaskedImageModelingOutput]:
r"""
bool_masked_pos (`torch.BoolTensor` of shape `(batch_size, num_patches)`):
Boolean masked positions. Indicates which patches are masked (1) and which aren't (0).
Returns:
Examples:
```python
>>> from transformers import AutoImageProcessor, DeiTForMaskedImageModeling
>>> import torch
>>> from PIL import Image
>>> import requests
>>> url = "http://images.cocodataset.org/val2017/000000039769.jpg"
>>> image = Image.open(requests.get(url, stream=True).raw)
>>> image_processor = AutoImageProcessor.from_pretrained("facebook/deit-base-distilled-patch16-224")
>>> model = DeiTForMaskedImageModeling.from_pretrained("facebook/deit-base-distilled-patch16-224")
>>> num_patches = (model.config.image_size // model.config.patch_size) ** 2
>>> pixel_values = image_processor(images=image, return_tensors="pt").pixel_values
>>> # create random boolean mask of shape (batch_size, num_patches)
>>> bool_masked_pos = torch.randint(low=0, high=2, size=(1, num_patches)).bool()
>>> outputs = model(pixel_values, bool_masked_pos=bool_masked_pos)
>>> loss, reconstructed_pixel_values = outputs.loss, outputs.reconstruction
>>> list(reconstructed_pixel_values.shape)
[1, 3, 224, 224]
```"""
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
outputs = self.deit(
pixel_values,
bool_masked_pos=bool_masked_pos,
head_mask=head_mask,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
sequence_output = outputs[0]
# Reshape to (batch_size, num_channels, height, width)
sequence_output = sequence_output[:, 1:-1]
batch_size, sequence_length, num_channels = sequence_output.shape
height = width = int(sequence_length**0.5)
sequence_output = sequence_output.permute(0, 2, 1).reshape(batch_size, num_channels, height, width)
# Reconstruct pixel values
reconstructed_pixel_values = self.decoder(sequence_output)
masked_im_loss = None
if bool_masked_pos is not None:
size = self.config.image_size // self.config.patch_size
bool_masked_pos = bool_masked_pos.reshape(-1, size, size)
mask = (
bool_masked_pos.repeat_interleave(self.config.patch_size, 1)
.repeat_interleave(self.config.patch_size, 2)
.unsqueeze(1)
.contiguous()
)
reconstruction_loss = nn.functional.l1_loss(pixel_values, reconstructed_pixel_values, reduction="none")
masked_im_loss = (reconstruction_loss * mask).sum() / (mask.sum() + 1e-5) / self.config.num_channels
if not return_dict:
output = (reconstructed_pixel_values,) + outputs[1:]
return ((masked_im_loss,) + output) if masked_im_loss is not None else output
return MaskedImageModelingOutput(
loss=masked_im_loss,
reconstruction=reconstructed_pixel_values,
hidden_states=outputs.hidden_states,
attentions=outputs.attentions,
)
@add_start_docstrings(
"""
DeiT Model transformer with an image classification head on top (a linear layer on top of the final hidden state of
the [CLS] token) e.g. for ImageNet.
""",
DEIT_START_DOCSTRING,
)
class DeiTForImageClassification(DeiTPreTrainedModel):
def __init__(self, config: DeiTConfig) -> None:
super().__init__(config)
self.num_labels = config.num_labels
self.deit = DeiTModel(config, add_pooling_layer=False)
# Classifier head
self.classifier = nn.Linear(config.hidden_size, config.num_labels) if config.num_labels > 0 else nn.Identity()
# Initialize weights and apply final processing
self.post_init()
@add_start_docstrings_to_model_forward(DEIT_INPUTS_DOCSTRING)
@replace_return_docstrings(output_type=ImageClassifierOutput, config_class=_CONFIG_FOR_DOC)
def forward(
self,
pixel_values: Optional[torch.Tensor] = None,
head_mask: Optional[torch.Tensor] = None,
labels: Optional[torch.Tensor] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[tuple, ImageClassifierOutput]:
r"""
labels (`torch.LongTensor` of shape `(batch_size,)`, *optional*):
Labels for computing the image classification/regression loss. Indices should be in `[0, ...,
config.num_labels - 1]`. If `config.num_labels == 1` a regression loss is computed (Mean-Square loss), If
`config.num_labels > 1` a classification loss is computed (Cross-Entropy).
Returns:
Examples:
```python
>>> from transformers import AutoImageProcessor, DeiTForImageClassification
>>> import torch
>>> from PIL import Image
>>> import requests
>>> torch.manual_seed(3) # doctest: +IGNORE_RESULT
>>> url = "http://images.cocodataset.org/val2017/000000039769.jpg"
>>> image = Image.open(requests.get(url, stream=True).raw)
>>> # note: we are loading a DeiTForImageClassificationWithTeacher from the hub here,
>>> # so the head will be randomly initialized, hence the predictions will be random
>>> image_processor = AutoImageProcessor.from_pretrained("facebook/deit-base-distilled-patch16-224")
>>> model = DeiTForImageClassification.from_pretrained("facebook/deit-base-distilled-patch16-224")
>>> inputs = image_processor(images=image, return_tensors="pt")
>>> outputs = model(**inputs)
>>> logits = outputs.logits
>>> # model predicts one of the 1000 ImageNet classes
>>> predicted_class_idx = logits.argmax(-1).item()
>>> print("Predicted class:", model.config.id2label[predicted_class_idx])
Predicted class: magpie
```"""
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
outputs = self.deit(
pixel_values,
head_mask=head_mask,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
sequence_output = outputs[0]
logits = self.classifier(sequence_output[:, 0, :])
# we don't use the distillation token
loss = None
if labels is not None:
labels = labels.to(logits.device)
if self.config.problem_type is None:
if self.num_labels == 1:
self.config.problem_type = "regression"
elif self.num_labels > 1 and (labels.dtype == torch.long or labels.dtype == torch.int):
self.config.problem_type = "single_label_classification"
else:
self.config.problem_type = "multi_label_classification"
if self.config.problem_type == "regression":
loss_fct = MSELoss()
if self.num_labels == 1:
loss = loss_fct(logits.squeeze(), labels.squeeze())
else:
loss = loss_fct(logits, labels)
elif self.config.problem_type == "single_label_classification":
loss_fct = CrossEntropyLoss()
loss = loss_fct(logits.view(-1, self.num_labels), labels.view(-1))
elif self.config.problem_type == "multi_label_classification":
loss_fct = BCEWithLogitsLoss()
loss = loss_fct(logits, labels)
if not return_dict:
output = (logits,) + outputs[1:]
return ((loss,) + output) if loss is not None else output
return ImageClassifierOutput(
loss=loss,
logits=logits,
hidden_states=outputs.hidden_states,
attentions=outputs.attentions,
)
@dataclass
class DeiTForImageClassificationWithTeacherOutput(ModelOutput):
"""
Output type of [`DeiTForImageClassificationWithTeacher`].
Args:
logits (`torch.FloatTensor` of shape `(batch_size, config.num_labels)`):
Prediction scores as the average of the cls_logits and distillation logits.
cls_logits (`torch.FloatTensor` of shape `(batch_size, config.num_labels)`):
Prediction scores of the classification head (i.e. the linear layer on top of the final hidden state of the
class token).
distillation_logits (`torch.FloatTensor` of shape `(batch_size, config.num_labels)`):
Prediction scores of the distillation head (i.e. the linear layer on top of the final hidden state of the
distillation token).
hidden_states (`tuple(torch.FloatTensor)`, *optional*, returned when `output_hidden_states=True` is passed or when `config.output_hidden_states=True`):
Tuple of `torch.FloatTensor` (one for the output of the embeddings + one for the output of each layer) of
shape `(batch_size, sequence_length, hidden_size)`. Hidden-states of the model at the output of each layer
plus the initial embedding outputs.
attentions (`tuple(torch.FloatTensor)`, *optional*, returned when `output_attentions=True` is passed or when `config.output_attentions=True`):
Tuple of `torch.FloatTensor` (one for each layer) of shape `(batch_size, num_heads, sequence_length,
sequence_length)`. Attentions weights after the attention softmax, used to compute the weighted average in
the self-attention heads.
"""
logits: torch.FloatTensor = None
cls_logits: torch.FloatTensor = None
distillation_logits: torch.FloatTensor = None
hidden_states: Optional[Tuple[torch.FloatTensor]] = None
attentions: Optional[Tuple[torch.FloatTensor]] = None
@add_start_docstrings(
"""
DeiT Model transformer with image classification heads on top (a linear layer on top of the final hidden state of
the [CLS] token and a linear layer on top of the final hidden state of the distillation token) e.g. for ImageNet.
.. warning::
This model supports inference-only. Fine-tuning with distillation (i.e. with a teacher) is not yet
supported.
""",
DEIT_START_DOCSTRING,
)
class DeiTForImageClassificationWithTeacher(DeiTPreTrainedModel):
def __init__(self, config: DeiTConfig) -> None:
super().__init__(config)
self.num_labels = config.num_labels
self.deit = DeiTModel(config, add_pooling_layer=False)
# Classifier heads
self.cls_classifier = (
nn.Linear(config.hidden_size, config.num_labels) if config.num_labels > 0 else nn.Identity()
)
self.distillation_classifier = (
nn.Linear(config.hidden_size, config.num_labels) if config.num_labels > 0 else nn.Identity()
)
# Initialize weights and apply final processing
self.post_init()
@add_start_docstrings_to_model_forward(DEIT_INPUTS_DOCSTRING)
@add_code_sample_docstrings(
checkpoint=_IMAGE_CLASS_CHECKPOINT,
output_type=DeiTForImageClassificationWithTeacherOutput,
config_class=_CONFIG_FOR_DOC,
expected_output=_IMAGE_CLASS_EXPECTED_OUTPUT,
)
def forward(
self,
pixel_values: Optional[torch.Tensor] = None,
head_mask: Optional[torch.Tensor] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[tuple, DeiTForImageClassificationWithTeacherOutput]:
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
outputs = self.deit(
pixel_values,
head_mask=head_mask,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
sequence_output = outputs[0]
cls_logits = self.cls_classifier(sequence_output[:, 0, :])
distillation_logits = self.distillation_classifier(sequence_output[:, 1, :])
# during inference, return the average of both classifier predictions
logits = (cls_logits + distillation_logits) / 2
if not return_dict:
output = (logits, cls_logits, distillation_logits) + outputs[1:]
return output
return DeiTForImageClassificationWithTeacherOutput(
logits=logits,
cls_logits=cls_logits,
distillation_logits=distillation_logits,
hidden_states=outputs.hidden_states,
attentions=outputs.attentions,
)
| 38,581 | 41.632044 | 159 | py |
transformers | transformers-main/src/transformers/models/deit/image_processing_deit.py | # coding=utf-8
# Copyright 2022 The HuggingFace Inc. team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
"""Image processor class for DeiT."""
from typing import Dict, List, Optional, Union
import numpy as np
from ...image_processing_utils import BaseImageProcessor, BatchFeature, get_size_dict
from ...image_transforms import center_crop, normalize, rescale, resize, to_channel_dimension_format
from ...image_utils import (
IMAGENET_STANDARD_MEAN,
IMAGENET_STANDARD_STD,
ChannelDimension,
ImageInput,
PILImageResampling,
make_list_of_images,
to_numpy_array,
valid_images,
)
from ...utils import TensorType, is_vision_available, logging
if is_vision_available():
import PIL
logger = logging.get_logger(__name__)
class DeiTImageProcessor(BaseImageProcessor):
r"""
Constructs a DeiT image processor.
Args:
do_resize (`bool`, *optional*, defaults to `True`):
Whether to resize the image's (height, width) dimensions to the specified `size`. Can be overridden by
`do_resize` in `preprocess`.
size (`Dict[str, int]` *optional*, defaults to `{"height": 256, "width": 256}`):
Size of the image after `resize`. Can be overridden by `size` in `preprocess`.
resample (`PILImageResampling` filter, *optional*, defaults to `PILImageResampling.BICUBIC`):
Resampling filter to use if resizing the image. Can be overridden by `resample` in `preprocess`.
do_center_crop (`bool`, *optional*, defaults to `True`):
Whether to center crop the image. If the input size is smaller than `crop_size` along any edge, the image
is padded with 0's and then center cropped. Can be overridden by `do_center_crop` in `preprocess`.
crop_size (`Dict[str, int]`, *optional*, defaults to `{"height": 224, "width": 224}`):
Desired output size when applying center-cropping. Can be overridden by `crop_size` in `preprocess`.
do_rescale (`bool`, *optional*, defaults to `True`):
Whether to rescale the image by the specified scale `rescale_factor`. Can be overridden by the `do_rescale`
parameter in the `preprocess` method.
rescale_factor (`int` or `float`, *optional*, defaults to `1/255`):
Scale factor to use if rescaling the image. Can be overridden by the `rescale_factor` parameter in the
`preprocess` method.
do_normalize (`bool`, *optional*, defaults to `True`):
Whether to normalize the image. Can be overridden by the `do_normalize` parameter in the `preprocess`
method.
image_mean (`float` or `List[float]`, *optional*, defaults to `IMAGENET_STANDARD_MEAN`):
Mean to use if normalizing the image. This is a float or list of floats the length of the number of
channels in the image. Can be overridden by the `image_mean` parameter in the `preprocess` method.
image_std (`float` or `List[float]`, *optional*, defaults to `IMAGENET_STANDARD_STD`):
Standard deviation to use if normalizing the image. This is a float or list of floats the length of the
number of channels in the image. Can be overridden by the `image_std` parameter in the `preprocess` method.
"""
model_input_names = ["pixel_values"]
def __init__(
self,
do_resize: bool = True,
size: Dict[str, int] = None,
resample: PILImageResampling = PIL.Image.BICUBIC,
do_center_crop: bool = True,
crop_size: Dict[str, int] = None,
rescale_factor: Union[int, float] = 1 / 255,
do_rescale: bool = True,
do_normalize: bool = True,
image_mean: Optional[Union[float, List[float]]] = None,
image_std: Optional[Union[float, List[float]]] = None,
**kwargs,
) -> None:
super().__init__(**kwargs)
size = size if size is not None else {"height": 256, "width": 256}
size = get_size_dict(size)
crop_size = crop_size if crop_size is not None else {"height": 224, "width": 224}
crop_size = get_size_dict(crop_size, param_name="crop_size")
self.do_resize = do_resize
self.size = size
self.resample = resample
self.do_center_crop = do_center_crop
self.crop_size = crop_size
self.do_rescale = do_rescale
self.rescale_factor = rescale_factor
self.do_normalize = do_normalize
self.image_mean = image_mean if image_mean is not None else IMAGENET_STANDARD_MEAN
self.image_std = image_std if image_std is not None else IMAGENET_STANDARD_STD
def resize(
self,
image: np.ndarray,
size: Dict[str, int],
resample: PILImageResampling = PIL.Image.BICUBIC,
data_format: Optional[Union[str, ChannelDimension]] = None,
**kwargs,
) -> np.ndarray:
"""
Resize an image to `(size["height"], size["width"])` using the specified resampling filter.
Args:
image (`np.ndarray`):
Image to resize.
size (`Dict[str, int]`):
Size of the output image.
resample (`PILImageResampling` filter, *optional*, defaults to `PILImageResampling.BICUBIC`):
Resampling filter to use when resizing the image.
data_format (`str` or `ChannelDimension`, *optional*):
The channel dimension format of the image. If not provided, it will be the same as the input image.
"""
size = get_size_dict(size)
if "height" not in size or "width" not in size:
raise ValueError(f"The size dictionary must have keys 'height' and 'width'. Got {size.keys()}")
return resize(
image, size=(size["height"], size["width"]), resample=resample, data_format=data_format, **kwargs
)
def center_crop(
self,
image: np.ndarray,
size: Dict[str, int],
data_format: Optional[Union[str, ChannelDimension]] = None,
**kwargs,
) -> np.ndarray:
"""
Center crop an image to `(crop_size["height"], crop_size["width"])`. If the input size is smaller than
`crop_size` along any edge, the image is padded with 0's and then center cropped.
Args:
image (`np.ndarray`):
Image to center crop.
size (`Dict[str, int]`):
Size of the output image.
data_format (`str` or `ChannelDimension`, *optional*):
The channel dimension format of the image. If not provided, it will be the same as the input image.
"""
size = get_size_dict(size)
if "height" not in size or "width" not in size:
raise ValueError(f"The size dictionary must have keys 'height' and 'width'. Got {size.keys()}")
return center_crop(image, size=(size["height"], size["width"]), data_format=data_format, **kwargs)
def rescale(
self,
image: np.ndarray,
scale: Union[int, float],
data_format: Optional[Union[str, ChannelDimension]] = None,
**kwargs,
):
"""
Rescale an image by a scale factor. image = image * scale.
Args:
image (`np.ndarray`):
Image to rescale.
scale (`int` or `float`):
Scale to apply to the image.
data_format (`str` or `ChannelDimension`, *optional*):
The channel dimension format of the image. If not provided, it will be the same as the input image.
"""
return rescale(image, scale=scale, data_format=data_format, **kwargs)
def normalize(
self,
image: np.ndarray,
mean: Union[float, List[float]],
std: Union[float, List[float]],
data_format: Optional[Union[str, ChannelDimension]] = None,
**kwargs,
) -> np.ndarray:
"""
Normalize an image. image = (image - image_mean) / image_std.
Args:
image (`np.ndarray`):
Image to normalize.
image_mean (`float` or `List[float]`):
Image mean.
image_std (`float` or `List[float]`):
Image standard deviation.
data_format (`str` or `ChannelDimension`, *optional*):
The channel dimension format of the image. If not provided, it will be the same as the input image.
"""
return normalize(image, mean=mean, std=std, data_format=data_format, **kwargs)
def preprocess(
self,
images: ImageInput,
do_resize: bool = None,
size: Dict[str, int] = None,
resample=None,
do_center_crop: bool = None,
crop_size: Dict[str, int] = None,
do_rescale: bool = None,
rescale_factor: float = None,
do_normalize: bool = None,
image_mean: Optional[Union[float, List[float]]] = None,
image_std: Optional[Union[float, List[float]]] = None,
return_tensors: Optional[Union[str, TensorType]] = None,
data_format: ChannelDimension = ChannelDimension.FIRST,
**kwargs,
) -> PIL.Image.Image:
"""
Preprocess an image or batch of images.
Args:
images (`ImageInput`):
Image to preprocess.
do_resize (`bool`, *optional*, defaults to `self.do_resize`):
Whether to resize the image.
size (`Dict[str, int]`, *optional*, defaults to `self.size`):
Size of the image after `resize`.
resample (`PILImageResampling`, *optional*, defaults to `self.resample`):
PILImageResampling filter to use if resizing the image Only has an effect if `do_resize` is set to
`True`.
do_center_crop (`bool`, *optional*, defaults to `self.do_center_crop`):
Whether to center crop the image.
crop_size (`Dict[str, int]`, *optional*, defaults to `self.crop_size`):
Size of the image after center crop. If one edge the image is smaller than `crop_size`, it will be
padded with zeros and then cropped
do_rescale (`bool`, *optional*, defaults to `self.do_rescale`):
Whether to rescale the image values between [0 - 1].
rescale_factor (`float`, *optional*, defaults to `self.rescale_factor`):
Rescale factor to rescale the image by if `do_rescale` is set to `True`.
do_normalize (`bool`, *optional*, defaults to `self.do_normalize`):
Whether to normalize the image.
image_mean (`float` or `List[float]`, *optional*, defaults to `self.image_mean`):
Image mean.
image_std (`float` or `List[float]`, *optional*, defaults to `self.image_std`):
Image standard deviation.
return_tensors (`str` or `TensorType`, *optional*):
The type of tensors to return. Can be one of:
- `None`: Return a list of `np.ndarray`.
- `TensorType.TENSORFLOW` or `'tf'`: Return a batch of type `tf.Tensor`.
- `TensorType.PYTORCH` or `'pt'`: Return a batch of type `torch.Tensor`.
- `TensorType.NUMPY` or `'np'`: Return a batch of type `np.ndarray`.
- `TensorType.JAX` or `'jax'`: Return a batch of type `jax.numpy.ndarray`.
data_format (`ChannelDimension` or `str`, *optional*, defaults to `ChannelDimension.FIRST`):
The channel dimension format for the output image. Can be one of:
- `ChannelDimension.FIRST`: image in (num_channels, height, width) format.
- `ChannelDimension.LAST`: image in (height, width, num_channels) format.
"""
do_resize = do_resize if do_resize is not None else self.do_resize
resample = resample if resample is not None else self.resample
do_center_crop = do_center_crop if do_center_crop is not None else self.do_center_crop
do_rescale = do_rescale if do_rescale is not None else self.do_rescale
rescale_factor = rescale_factor if rescale_factor is not None else self.rescale_factor
do_normalize = do_normalize if do_normalize is not None else self.do_normalize
image_mean = image_mean if image_mean is not None else self.image_mean
image_std = image_std if image_std is not None else self.image_std
size = size if size is not None else self.size
size = get_size_dict(size)
crop_size = crop_size if crop_size is not None else self.crop_size
crop_size = get_size_dict(crop_size, param_name="crop_size")
images = make_list_of_images(images)
if not valid_images(images):
raise ValueError(
"Invalid image type. Must be of type PIL.Image.Image, numpy.ndarray, "
"torch.Tensor, tf.Tensor or jax.ndarray."
)
if do_resize and size is None or resample is None:
raise ValueError("Size and resample must be specified if do_resize is True.")
if do_center_crop and crop_size is None:
raise ValueError("Crop size must be specified if do_center_crop is True.")
if do_rescale and rescale_factor is None:
raise ValueError("Rescale factor must be specified if do_rescale is True.")
if do_normalize and (image_mean is None or image_std is None):
raise ValueError("Image mean and std must be specified if do_normalize is True.")
# All transformations expect numpy arrays.
images = [to_numpy_array(image) for image in images]
if do_resize:
images = [self.resize(image=image, size=size, resample=resample) for image in images]
if do_center_crop:
images = [self.center_crop(image=image, size=crop_size) for image in images]
if do_rescale:
images = [self.rescale(image=image, scale=rescale_factor) for image in images]
if do_normalize:
images = [self.normalize(image=image, mean=image_mean, std=image_std) for image in images]
images = [to_channel_dimension_format(image, data_format) for image in images]
data = {"pixel_values": images}
return BatchFeature(data=data, tensor_type=return_tensors)
| 14,866 | 46.196825 | 119 | py |
transformers | transformers-main/src/transformers/models/deit/__init__.py | # Copyright 2021 The HuggingFace Team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
from typing import TYPE_CHECKING
from ...utils import (
OptionalDependencyNotAvailable,
_LazyModule,
is_tf_available,
is_torch_available,
is_vision_available,
)
_import_structure = {"configuration_deit": ["DEIT_PRETRAINED_CONFIG_ARCHIVE_MAP", "DeiTConfig", "DeiTOnnxConfig"]}
try:
if not is_vision_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
_import_structure["feature_extraction_deit"] = ["DeiTFeatureExtractor"]
_import_structure["image_processing_deit"] = ["DeiTImageProcessor"]
try:
if not is_torch_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
_import_structure["modeling_deit"] = [
"DEIT_PRETRAINED_MODEL_ARCHIVE_LIST",
"DeiTForImageClassification",
"DeiTForImageClassificationWithTeacher",
"DeiTForMaskedImageModeling",
"DeiTModel",
"DeiTPreTrainedModel",
]
try:
if not is_tf_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
_import_structure["modeling_tf_deit"] = [
"TF_DEIT_PRETRAINED_MODEL_ARCHIVE_LIST",
"TFDeiTForImageClassification",
"TFDeiTForImageClassificationWithTeacher",
"TFDeiTForMaskedImageModeling",
"TFDeiTModel",
"TFDeiTPreTrainedModel",
]
if TYPE_CHECKING:
from .configuration_deit import DEIT_PRETRAINED_CONFIG_ARCHIVE_MAP, DeiTConfig, DeiTOnnxConfig
try:
if not is_vision_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
from .feature_extraction_deit import DeiTFeatureExtractor
from .image_processing_deit import DeiTImageProcessor
try:
if not is_torch_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
from .modeling_deit import (
DEIT_PRETRAINED_MODEL_ARCHIVE_LIST,
DeiTForImageClassification,
DeiTForImageClassificationWithTeacher,
DeiTForMaskedImageModeling,
DeiTModel,
DeiTPreTrainedModel,
)
try:
if not is_tf_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
from .modeling_tf_deit import (
TF_DEIT_PRETRAINED_MODEL_ARCHIVE_LIST,
TFDeiTForImageClassification,
TFDeiTForImageClassificationWithTeacher,
TFDeiTForMaskedImageModeling,
TFDeiTModel,
TFDeiTPreTrainedModel,
)
else:
import sys
sys.modules[__name__] = _LazyModule(__name__, globals()["__file__"], _import_structure, module_spec=__spec__)
| 3,486 | 29.587719 | 114 | py |
transformers | transformers-main/src/transformers/models/tvlt/image_processing_tvlt.py | # coding=utf-8
# Copyright 2023 The HuggingFace Inc. team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
"""Image processor class for TVLT."""
from typing import Dict, List, Optional, Union
import numpy as np
from ...image_processing_utils import BaseImageProcessor, BatchFeature, get_size_dict
from ...image_transforms import (
center_crop,
get_resize_output_image_size,
normalize,
rescale,
resize,
to_channel_dimension_format,
)
from ...image_utils import (
IMAGENET_STANDARD_MEAN,
IMAGENET_STANDARD_STD,
ChannelDimension,
ImageInput,
PILImageResampling,
is_valid_image,
to_numpy_array,
valid_images,
)
from ...utils import TensorType, logging
logger = logging.get_logger(__name__)
def make_batched(videos) -> List[List[ImageInput]]:
if isinstance(videos, (list, tuple)) and isinstance(videos[0], (list, tuple)):
return videos
elif isinstance(videos, (list, tuple)) and is_valid_image(videos[0]):
videos_dim = np.array(videos[0]).ndim
if videos_dim == 3:
return [videos]
elif videos_dim == 4:
return videos
elif is_valid_image(videos):
videos_dim = np.array(videos).ndim
if videos_dim == 3:
return [[videos]]
elif videos_dim == 4:
return [videos]
elif videos_dim == 5:
return videos
raise ValueError(f"Could not make batched video from {videos}")
class TvltImageProcessor(BaseImageProcessor):
r"""
Constructs a TVLT image processor.
This processor can be used to prepare either videos or images for the model by converting images to 1-frame videos.
Args:
do_resize (`bool`, *optional*, defaults to `True`):
Whether to resize the image's (height, width) dimensions to the specified `size`. Can be overridden by the
`do_resize` parameter in the `preprocess` method.
size (`Dict[str, int]` *optional*, defaults to `{"shortest_edge": 224}`):
Size of the output image after resizing. The shortest edge of the image will be resized to
`size["shortest_edge"]` while maintaining the aspect ratio of the original image. Can be overriden by
`size` in the `preprocess` method.
patch_size (`List[int]` *optional*, defaults to [16,16]):
The patch size of image patch embedding.
num_frames (`int` *optional*, defaults to 8):
The maximum number of video frames.
resample (`PILImageResampling`, *optional*, defaults to `PILImageResampling.BILINEAR`):
Resampling filter to use if resizing the image. Can be overridden by the `resample` parameter in the
`preprocess` method.
do_center_crop (`bool`, *optional*, defaults to `True`):
Whether to center crop the image to the specified `crop_size`. Can be overridden by the `do_center_crop`
parameter in the `preprocess` method.
crop_size (`Dict[str, int]`, *optional*, defaults to `{"height": 224, "width": 224}`):
Size of the image after applying the center crop. Can be overridden by the `crop_size` parameter in the
`preprocess` method.
do_rescale (`bool`, *optional*, defaults to `True`):
Whether to rescale the image by the specified scale `rescale_factor`. Can be overridden by the `do_rescale`
parameter in the `preprocess` method.
rescale_factor (`int` or `float`, *optional*, defaults to 1/255):
Defines the scale factor to use if rescaling the image. Can be overridden by the `rescale_factor` parameter
in the `preprocess` method.
do_normalize (`bool`, *optional*, defaults to `True`):
Whether to normalize the image. Can be overridden by the `do_normalize` parameter in the `preprocess`
method.
image_mean (`float` or `List[float]`, *optional*, defaults to `IMAGENET_STANDARD_MEAN`):
Mean to use if normalizing the image. This is a float or list of floats the length of the number of
channels in the image. Can be overridden by the `image_mean` parameter in the `preprocess` method.
image_std (`float` or `List[float]`, *optional*, defaults to `IMAGENET_STANDARD_STD`):
Standard deviation to use if normalizing the image. This is a float or list of floats the length of the
number of channels in the image. Can be overridden by the `image_std` parameter in the `preprocess` method.
"""
model_input_names = [
"pixel_values",
"pixel_mask",
"pixel_values_mixed",
"pixel_mask_mixed",
]
def __init__(
self,
do_resize: bool = True,
size: Dict[str, int] = None,
patch_size: List[int] = [16, 16],
num_frames: int = 8,
resample: PILImageResampling = PILImageResampling.BILINEAR,
do_center_crop: bool = True,
crop_size: Dict[str, int] = None,
do_rescale: bool = True,
rescale_factor: Union[int, float] = 1 / 255,
do_normalize: bool = True,
image_mean: Optional[Union[float, List[float]]] = IMAGENET_STANDARD_MEAN,
image_std: Optional[Union[float, List[float]]] = IMAGENET_STANDARD_STD,
init_mask_generator=False,
**kwargs,
) -> None:
super().__init__(**kwargs)
size = size if size is not None else {"shortest_edge": 224}
size = get_size_dict(size, default_to_square=False)
crop_size = crop_size if crop_size is not None else {"height": 224, "width": 224}
crop_size = get_size_dict(crop_size, param_name="crop_size")
self.do_resize = do_resize
self.size = size
self.patch_size = patch_size
self.num_frames = num_frames
self.do_center_crop = do_center_crop
self.crop_size = crop_size
self.resample = resample
self.do_rescale = do_rescale
self.rescale_factor = rescale_factor
self.do_normalize = do_normalize
self.image_mean = image_mean
self.image_std = image_std
def resize(
self,
image: np.ndarray,
size: Dict[str, int],
resample: PILImageResampling = PILImageResampling.BILINEAR,
data_format: Optional[Union[str, ChannelDimension]] = None,
**kwargs,
) -> np.ndarray:
"""
Resize an image.
Args:
image (`np.ndarray`):
Image to resize.
size (`Dict[str, int]`):
Size of the output image. If `size` is of the form `{"height": h, "width": w}`, the output image will
have the size `(h, w)`. If `size` is of the form `{"shortest_edge": s}`, the output image will have its
shortest edge of length `s` while keeping the aspect ratio of the original image.
resample (`PILImageResampling`, *optional*, defaults to `PILImageResampling.BILINEAR`):
Resampling filter to use when resiizing the image.
data_format (`str` or `ChannelDimension`, *optional*):
The channel dimension format of the image. If not provided, it will be the same as the input image.
"""
size = get_size_dict(size, default_to_square=False)
if "shortest_edge" in size:
output_size = get_resize_output_image_size(image, size["shortest_edge"], default_to_square=False)
elif "height" in size and "width" in size:
output_size = (size["height"], size["width"])
else:
raise ValueError(f"Size must have 'height' and 'width' or 'shortest_edge' as keys. Got {size.keys()}")
return resize(image, size=output_size, resample=resample, data_format=data_format, **kwargs)
def center_crop(
self,
image: np.ndarray,
size: Dict[str, int],
data_format: Optional[Union[str, ChannelDimension]] = None,
**kwargs,
) -> np.ndarray:
"""
Center crop an image to `(size["height"], size["width"])`. If the input size is smaller than `size` along any
edge, the image is padded with 0's and then center cropped.
Args:
image (`np.ndarray`):
Image to center crop.
size (`Dict[str, int]`):
Size of the output image.
data_format (`str` or `ChannelDimension`, *optional*):
The channel dimension format of the image. If not provided, it will be the same as the input image.
"""
size = get_size_dict(size)
if "height" not in size or "width" not in size:
raise ValueError(f"Size must have 'height' and 'width' as keys. Got {size.keys()}")
return center_crop(image, size=(size["height"], size["width"]), data_format=data_format, **kwargs)
def rescale(
self,
image: np.ndarray,
scale: Union[int, float],
data_format: Optional[Union[str, ChannelDimension]] = None,
**kwargs,
):
"""
Rescale an image by a scale factor. image = image * scale.
Args:
image (`np.ndarray`):
Image to rescale.
scale (`int` or `float`):
Scale to apply to the image.
data_format (`str` or `ChannelDimension`, *optional*):
The channel dimension format of the image. If not provided, it will be the same as the input image.
"""
return rescale(image, scale=scale, data_format=data_format, **kwargs)
# Copied from transformers.models.vit.image_processing_vit.ViTImageProcessor.normalize
def normalize(
self,
image: np.ndarray,
mean: Union[float, List[float]],
std: Union[float, List[float]],
data_format: Optional[Union[str, ChannelDimension]] = None,
**kwargs,
) -> np.ndarray:
"""
Normalize an image. image = (image - image_mean) / image_std.
Args:
image (`np.ndarray`):
Image to normalize.
mean (`float` or `List[float]`):
Image mean to use for normalization.
std (`float` or `List[float]`):
Image standard deviation to use for normalization.
data_format (`str` or `ChannelDimension`, *optional*):
The channel dimension format for the output image. If unset, the channel dimension format of the input
image is used. Can be one of:
- `"channels_first"` or `ChannelDimension.FIRST`: image in (num_channels, height, width) format.
- `"channels_last"` or `ChannelDimension.LAST`: image in (height, width, num_channels) format.
Returns:
`np.ndarray`: The normalized image.
"""
return normalize(image, mean=mean, std=std, data_format=data_format, **kwargs)
def _preprocess_image(
self,
image: ImageInput,
do_resize: bool = None,
size: Dict[str, int] = None,
resample: PILImageResampling = None,
do_center_crop: bool = None,
crop_size: Dict[str, int] = None,
do_rescale: bool = None,
rescale_factor: float = None,
do_normalize: bool = None,
image_mean: Optional[Union[float, List[float]]] = None,
image_std: Optional[Union[float, List[float]]] = None,
data_format: Optional[ChannelDimension] = ChannelDimension.FIRST,
) -> np.ndarray:
"""Preprocesses a single image."""
if do_resize and size is None or resample is None:
raise ValueError("Size and resample must be specified if do_resize is True.")
if do_center_crop and crop_size is None:
raise ValueError("Crop size must be specified if do_center_crop is True.")
if do_rescale and rescale_factor is None:
raise ValueError("Rescale factor must be specified if do_rescale is True.")
if do_normalize and (image_mean is None or image_std is None):
raise ValueError("Image mean and std must be specified if do_normalize is True.")
# All transformations expect numpy arrays.
image = to_numpy_array(image)
if do_resize:
image = self.resize(image=image, size=size, resample=resample)
if do_center_crop:
image = self.center_crop(image, size=crop_size)
if do_rescale:
image = self.rescale(image=image, scale=rescale_factor)
if do_normalize:
image = self.normalize(image=image, mean=image_mean, std=image_std)
image = to_channel_dimension_format(image, data_format)
return image
def preprocess(
self,
videos: ImageInput,
do_resize: bool = None,
size: Dict[str, int] = None,
patch_size: List[int] = None,
num_frames: int = None,
resample: PILImageResampling = None,
do_center_crop: bool = None,
crop_size: Dict[str, int] = None,
do_rescale: bool = None,
rescale_factor: float = None,
do_normalize: bool = None,
image_mean: Optional[Union[float, List[float]]] = None,
image_std: Optional[Union[float, List[float]]] = None,
is_mixed: bool = False,
return_tensors: Optional[Union[str, TensorType]] = None,
data_format: ChannelDimension = ChannelDimension.FIRST,
**kwargs,
) -> BatchFeature:
"""
Preprocess an videos or image or batch of videos or images.
Args:
videos (`ImageInput`):
Images or videos to preprocess.
do_resize (`bool`, *optional*, defaults to `self.do_resize`):
Whether to resize the image.
size (`Dict[str, int]`, *optional*, defaults to `self.size`):
Size of the image after applying resize.
patch_size (`List[int]` *optional*, defaults to self.patch_size):
The patch size of image patch embedding.
num_frames (`int` *optional*, defaults to self.num_frames):
The maximum number of video frames.
resample (`PILImageResampling`, *optional*, defaults to `self.resample`):
Resampling filter to use if resizing the image. This can be one of the enum `PILImageResampling`, Only
has an effect if `do_resize` is set to `True`.
do_center_crop (`bool`, *optional*, defaults to `self.do_centre_crop`):
Whether to centre crop the image.
crop_size (`Dict[str, int]`, *optional*, defaults to `self.crop_size`):
Size of the image after applying the centre crop.
do_rescale (`bool`, *optional*, defaults to `self.do_rescale`):
Whether to rescale the image values between [0 - 1].
rescale_factor (`float`, *optional*, defaults to `self.rescale_factor`):
Rescale factor to rescale the image by if `do_rescale` is set to `True`.
do_normalize (`bool`, *optional*, defaults to `self.do_normalize`):
Whether to normalize the image.
image_mean (`float` or `List[float]`, *optional*, defaults to `self.image_mean`):
Image mean.
image_std (`float` or `List[float]`, *optional*, defaults to `self.image_std`):
Image standard deviation.
is_mixed (`bool`, *optional*):
If the input video has negative samples.
return_tensors (`str` or `TensorType`, *optional*):
The type of tensors to return. Can be one of:
- Unset: Return a list of `np.ndarray`.
- `TensorType.TENSORFLOW` or `'tf'`: Return a batch of type `tf.Tensor`.
- `TensorType.PYTORCH` or `'pt'`: Return a batch of type `torch.Tensor`.
- `TensorType.NUMPY` or `'np'`: Return a batch of type `np.ndarray`.
- `TensorType.JAX` or `'jax'`: Return a batch of type `jax.numpy.ndarray`.
data_format (`ChannelDimension` or `str`, *optional*, defaults to `ChannelDimension.FIRST`):
The channel dimension format for the output image. Can be one of:
- `ChannelDimension.FIRST`: image in (num_channels, height, width) format.
- `ChannelDimension.LAST`: image in (height, width, num_channels) format.
- Unset: Use the inferred channel dimension format of the input image.
Returns:
[`BatchFeature`]: A [`BatchFeature`] with the following fields:
- **pixel_values** -- Pixel values to be fed to a model, of shape (batch_size, num_channels, height,
width).
- **pixel_mask** -- Pixel masks to be fed to a model, of shape (batch_size, num_pixel_patches).
- **pixel_values_mixed** -- Pixel values with both postive or negative to be fed to a model, of shape
(batch_size, num_channels, height, width).
- **pixel_mask_mixed** -- Pixel masks with both postive or negative to be fed to a model, of shape
(batch_size, num_pixel_patches).
"""
do_resize = do_resize if do_resize is not None else self.do_resize
resample = resample if resample is not None else self.resample
do_center_crop = do_center_crop if do_center_crop is not None else self.do_center_crop
do_rescale = do_rescale if do_rescale is not None else self.do_rescale
rescale_factor = rescale_factor if rescale_factor is not None else self.rescale_factor
do_normalize = do_normalize if do_normalize is not None else self.do_normalize
image_mean = image_mean if image_mean is not None else self.image_mean
image_std = image_std if image_std is not None else self.image_std
size = size if size is not None else self.size
size = get_size_dict(size, default_to_square=False)
crop_size = crop_size if crop_size is not None else self.crop_size
crop_size = get_size_dict(crop_size, param_name="crop_size")
patch_size = patch_size if patch_size is not None else self.patch_size
num_frames = num_frames if patch_size is not None else self.num_frames
if not valid_images(videos):
raise ValueError(
"Invalid image or video type. Must be of type PIL.Image.Image, numpy.ndarray, "
"torch.Tensor, tf.Tensor or jax.ndarray."
)
videos = make_batched(videos)
# Check number of frames is fewer than maximum frames
for video in videos:
if len(video) > self.num_frames:
raise ValueError(
f"number of frames must not be greater than the maximum frames of the model {self.num_frames}."
)
max_num_frames = max([len(video) for video in videos])
num_patches_per_image = (size["shortest_edge"] // patch_size[0]) ** 2
video_masks = np.array(
[
len(video) * num_patches_per_image * [1] + (max_num_frames - len(video)) * num_patches_per_image * [0]
for video in videos
]
)
videos = [
[
self._preprocess_image(
image=img,
do_resize=do_resize,
size=size,
resample=resample,
do_center_crop=do_center_crop,
crop_size=crop_size,
do_rescale=do_rescale,
rescale_factor=rescale_factor,
do_normalize=do_normalize,
image_mean=image_mean,
image_std=image_std,
data_format=data_format,
)
for img in video
]
for video in videos
]
# If videos contain both positive/negative, use mixed key for video-audio matching task
if is_mixed:
data = {"pixel_values_mixed": videos, "pixel_mask_mixed": video_masks}
else:
data = {"pixel_values": videos, "pixel_mask": video_masks}
return BatchFeature(data=data, tensor_type=return_tensors)
| 20,730 | 44.662996 | 119 | py |
transformers | transformers-main/src/transformers/models/tvlt/modeling_tvlt.py | # coding=utf-8
# Copyright 2023 MURGe-Lab and The HuggingFace Inc. team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
""" PyTorch TVLT model."""
import collections.abc
import math
from copy import deepcopy
from dataclasses import dataclass
from typing import Optional, Tuple, Union
import torch
import torch.utils.checkpoint
from torch import nn
from torch.nn import BCEWithLogitsLoss, CrossEntropyLoss, MSELoss
from ...activations import ACT2FN
from ...modeling_outputs import BaseModelOutput, SequenceClassifierOutput
from ...modeling_utils import PreTrainedModel
from ...pytorch_utils import find_pruneable_heads_and_indices, prune_linear_layer
from ...utils import (
ModelOutput,
add_start_docstrings,
add_start_docstrings_to_model_forward,
logging,
replace_return_docstrings,
)
from .configuration_tvlt import TvltConfig
logger = logging.get_logger(__name__)
_CONFIG_FOR_DOC = "TvltConfig"
_CHECKPOINT_FOR_DOC = "ZinengTang/tvlt-base"
TVLT_PRETRAINED_MODEL_ARCHIVE_LIST = [
"ZinengTang/tvlt-base",
# See all TVLT models at https://huggingface.co/ZinengTang/tvlt-base
]
@dataclass
class TvltModelOutput(ModelOutput):
"""
Class for TvltModel's outputs, with potential hidden states and attentions.
Args:
last_hidden_state (`torch.FloatTensor` of shape `(batch_size, sequence_length, hidden_size)`):
Sequence of hidden-states at the output of the last layer of the model.
last_pixel_hidden_state (`torch.FloatTensor` of shape `(batch_size, pixel_sequence_length, hidden_size)`):
Pixel sequence of hidden-states at the output of the last layer of the model.
last_audio_hidden_state (`torch.FloatTensor` of shape `(batch_size, audio_sequence_length, hidden_size)`):
Audio sequence of hidden-states at the output of the last layer of the model.
pixel_label_masks (`torch.FloatTensor` of shape `(batch_size, pixel_patch_length)`):
Tensor indicating which pixel patches are masked (1) and which are not (0).
audio_label_masks (`torch.FloatTensor` of shape `(batch_size, audio_patch_length)`):
Tensor indicating which audio patches are masked (1) and which are not (0).
pixel_ids_restore (`torch.LongTensor` of shape `(batch_size, pixel_patch_length)`):
Tensor containing the ids permutation of pixel masking.
audio_ids_restore (`torch.LongTensor` of shape `(batch_size, audio_patch_length)`):
Tensor containing the ids permutation of audio masking.
hidden_states (`tuple(torch.FloatTensor)`, *optional*, returned when `output_hidden_states=True` is passed or when `config.output_hidden_states=True`):
Tuple of `torch.FloatTensor` (one for the output of the embeddings and one for the output of each layer) of
shape `(batch_size, sequence_length, hidden_size)`. Hidden-states of the model at the output of each layer
plus the initial embedding outputs.
attentions (`tuple(torch.FloatTensor)`, *optional*, returned when `output_attentions=True` is passed or when `config.output_attentions=True`):
Tuple of `torch.FloatTensor` (one for each layer) of shape `(batch_size, num_heads, sequence_length,
sequence_length)`. Attentions weights after the attention softmax, used to compute the weighted average in
the self-attention heads.
"""
last_hidden_state: torch.FloatTensor = None
last_pixel_hidden_state: torch.FloatTensor = None
last_audio_hidden_state: torch.FloatTensor = None
pixel_label_masks: torch.LongTensor = None
audio_label_masks: torch.LongTensor = None
pixel_ids_restore: torch.LongTensor = None
audio_ids_restore: torch.LongTensor = None
hidden_states: Optional[Tuple[torch.FloatTensor]] = None
attentions: Optional[Tuple[torch.FloatTensor]] = None
@dataclass
class TvltDecoderOutput(ModelOutput):
"""
Class for TvltDecoder's outputs, with potential hidden states and attentions.
Args:
logits (`torch.FloatTensor` of shape `(batch_size, patch_size ** 2 * num_channels)`):
Pixel reconstruction logits.
hidden_states (`tuple(torch.FloatTensor)`, *optional*, returned when `output_hidden_states=True` is passed or when `config.output_hidden_states=True`):
Tuple of `torch.FloatTensor` (one for the output of the embeddings and one for the output of each layer) of
shape `(batch_size, sequence_length, hidden_size)`. Hidden-states of the model at the output of each layer
plus the initial embedding outputs.
attentions (`tuple(torch.FloatTensor)`, *optional*, returned when `output_attentions=True` is passed or when `config.output_attentions=True`):
Tuple of `torch.FloatTensor` (one for each layer) of shape `(batch_size, num_heads, sequence_length,
sequence_length)`. Attentions weights after the attention softmax, used to compute the weighted average in
the self-attention heads.
"""
logits: torch.FloatTensor = None
hidden_states: Optional[Tuple[torch.FloatTensor]] = None
attentions: Optional[Tuple[torch.FloatTensor]] = None
@dataclass
class TvltForPreTrainingOutput(ModelOutput):
"""
Class for TvltForPreTraining's outputs, with potential hidden states and attentions.
Args:
loss (`torch.FloatTensor` of shape `(1,)`):
Pixel reconstruction loss.
matching_logits (`torch.FloatTensor` of shape `(batch_size, 1)`):
Matching objective logits.
pixel_logits (`torch.FloatTensor` of shape
`(batch_size, pixel_patch_length, image_patch_size ** 3 * pixel_num_channels)`): Pixel reconstruction
logits.
audio_logits (`torch.FloatTensor` of shape
`(batch_size, audio_patch_length, image_patch_size[0] * image_patch_size[1])`): Audio reconstruction
logits.
hidden_states (`tuple(torch.FloatTensor)`, *optional*, returned when `output_hidden_states=True` is passed or when `config.output_hidden_states=True`):
Tuple of `torch.FloatTensor` (one for the output of the embeddings and one for the output of each layer) of
shape `(batch_size, sequence_length, hidden_size)`. Hidden-states of the model at the output of each layer
plus the initial embedding outputs.
attentions (`tuple(torch.FloatTensor)`, *optional*, returned when `output_attentions=True` is passed or when `config.output_attentions=True`):
Tuple of `torch.FloatTensor` (one for each layer) of shape `(batch_size, num_heads, sequence_length,
sequence_length)`. Attentions weights after the attention softmax, used to compute the weighted average in
the self-attention heads.
"""
loss: Optional[torch.FloatTensor] = None
matching_logits: torch.FloatTensor = None
pixel_logits: torch.FloatTensor = None
audio_logits: torch.FloatTensor = None
hidden_states: Optional[Tuple[torch.FloatTensor]] = None
attentions: Optional[Tuple[torch.FloatTensor]] = None
def generate_pixel_mask_noise(pixel_values, pixel_mask=None, mask_ratio=0.75):
"""Generate noise for audio masking."""
batch_size, seq_len = pixel_values.shape[:2]
noise = torch.rand((batch_size, seq_len), device=pixel_values.device) # noise in [0, 1]
len_keep = int(seq_len * (1 - mask_ratio))
return noise, len_keep
def generate_audio_mask_noise(audio_values, audio_mask=None, mask_ratio=0.75, mask_type="patch-level", freq_len=8):
"""Generate noise for audio masking."""
batch_size, seq_len = audio_values.shape[:2]
if mask_type == "frame-level":
num_time_patches = seq_len // freq_len
noise = (
torch.rand(batch_size, num_time_patches, device=audio_values.device)
.unsqueeze(-1)
.repeat(1, 1, freq_len)
.view(batch_size, seq_len)
) # noise in [0, 1]
elif mask_type == "patch-level":
noise = torch.rand(batch_size, seq_len, device=audio_values.device) # noise in [0, 1]
len_keep = int(seq_len * (1 - mask_ratio))
return noise, len_keep
def random_masking(sequence, noise, len_keep, attention_masks=None):
"""
Perform random masking by per-sample shuffling on frame-level. Per-sample shuffling is done by argsort random
noise. sequence: [batch_size, seq_len, hidden_dim], sequence
"""
batch_size, seq_len, hidden_dim = sequence.shape
# sort noise for each sample
ids_shuffle = torch.argsort(noise, dim=1) # ascend: small is keep, large is remove
ids_restore = torch.argsort(ids_shuffle, dim=1)
# keep the first subset
ids_keep = ids_shuffle[:, :len_keep]
sequence_masked = torch.gather(sequence, dim=1, index=ids_keep.unsqueeze(-1).repeat(1, 1, hidden_dim))
# generate the binary mask: 0 is keep, 1 is remove
label_masks = torch.ones([batch_size, seq_len], device=sequence.device)
label_masks[:, :len_keep] = 0
# unshuffle to get the binary mask
label_masks = torch.gather(label_masks, dim=1, index=ids_restore)
if attention_masks is not None:
label_masks *= attention_masks
attention_masks = torch.gather(attention_masks, dim=1, index=ids_keep)
return sequence_masked, attention_masks, label_masks, ids_restore
class TvltPixelEmbeddings(nn.Module):
"""Construct the patch and position embeddings."""
def __init__(self, config):
super().__init__()
self.patch_embeddings = TvltPixelPatchEmbeddings(config)
self.num_patches_per_image = self.patch_embeddings.num_patches_per_image
self.type_embed_v = nn.Parameter(torch.zeros(1, 1, config.hidden_size))
self.temporal_embed = nn.Parameter(torch.zeros(1, config.num_frames, config.hidden_size))
self.pos_embed_v = nn.Parameter(torch.zeros(1, self.num_patches_per_image, config.hidden_size))
self.config = config
def forward(self, pixel_values, attention_masks=None):
# create patch embeddings
batch_size, num_frames, num_channels, height, width = pixel_values.shape
embeddings = self.patch_embeddings(pixel_values)
embeddings += self.pos_embed_v.repeat(1, num_frames, 1)
embeddings += torch.repeat_interleave(self.temporal_embed[:, :num_frames], self.num_patches_per_image, dim=1)
embeddings += self.type_embed_v
return embeddings, attention_masks
class TvltAudioEmbeddings(nn.Module):
"""Construct the patch and position embeddings."""
def __init__(self, config):
super().__init__()
self.patch_embeddings = TvltAudioPatchEmbeddings(config)
self.num_patches = self.patch_embeddings.num_patches
self.type_embed_a = nn.Parameter(torch.zeros(1, 1, config.hidden_size))
self.num_freq_patches = config.frequency_length // config.audio_patch_size[1]
self.pos_embed_a = nn.Parameter(torch.zeros(1, self.num_patches // self.num_freq_patches, config.hidden_size))
self.freq_embed = nn.Parameter(torch.zeros(1, self.num_freq_patches, config.hidden_size))
self.num_freq_patches = config.frequency_length // config.audio_patch_size[1]
self.config = config
def forward(self, audio_values, attention_masks=None):
# create patch embeddings
embeddings = self.patch_embeddings(audio_values)
num_time_patches = embeddings.size(1) // self.num_freq_patches
embeddings += self.freq_embed.repeat(1, num_time_patches, 1)
embeddings += torch.repeat_interleave(self.pos_embed_a[:, :num_time_patches], self.num_freq_patches, dim=1)
embeddings += self.type_embed_a
return embeddings, attention_masks
class TvltPixelPatchEmbeddings(nn.Module):
"""
This class turns `pixel_values` of shape `(batch_size, num_channels, height, width)` into the initial
`hidden_states` (patch embeddings) of shape `(batch_size, seq_length, hidden_size)` to be consumed by a
Transformer.
"""
def __init__(self, config):
super().__init__()
image_size, patch_size = config.image_size, config.image_patch_size
num_channels, hidden_size = config.num_image_channels, config.hidden_size
image_size = image_size if isinstance(image_size, collections.abc.Iterable) else (image_size, image_size)
patch_size = patch_size if isinstance(patch_size, collections.abc.Iterable) else (patch_size, patch_size)
num_patches_per_image = (image_size[1] // patch_size[1]) * (image_size[0] // patch_size[0])
self.image_size = image_size
self.patch_size = patch_size
self.num_channels = num_channels
self.num_patches_per_image = num_patches_per_image
self.hidden_size = hidden_size
self.projection = nn.Conv2d(num_channels, hidden_size, kernel_size=patch_size, stride=patch_size)
def forward(self, pixel_values: torch.Tensor) -> torch.Tensor:
batch_size, num_frames, num_channels, height, width = pixel_values.shape
if num_channels != self.num_channels:
raise ValueError(
"Make sure that the channel dimension of the pixel values match with the one set in the configuration."
)
if height != self.image_size[0] or width != self.image_size[1]:
raise ValueError(
f"Input image size ({height}*{width}) doesn't match model ({self.image_size[0]}*{self.image_size[1]})."
)
pixel_values = pixel_values.reshape(batch_size * num_frames, num_channels, height, width)
embeddings = self.projection(pixel_values).flatten(2).transpose(1, 2)
embeddings = embeddings.reshape(batch_size, num_frames * self.num_patches_per_image, self.hidden_size)
return embeddings
class TvltAudioPatchEmbeddings(nn.Module):
"""
This class turns `audio_values` of shape `(batch_size, num_channels, height, width)` into the initial
`hidden_states` (patch embeddings) of shape `(batch_size, seq_length, hidden_size)` to be consumed by a
Transformer.
"""
def __init__(self, config):
super().__init__()
spectrogram_length, frequency_length, patch_size = (
config.spectrogram_length,
config.frequency_length,
config.audio_patch_size,
)
num_channels, hidden_size = config.num_audio_channels, config.hidden_size
spectrogram_size = (spectrogram_length, frequency_length)
patch_size = patch_size if isinstance(patch_size, collections.abc.Iterable) else (patch_size, patch_size)
num_patches = (spectrogram_size[1] // patch_size[1]) * (spectrogram_size[0] // patch_size[0])
patch_shape = (spectrogram_size[0] // patch_size[0], spectrogram_size[1] // patch_size[1])
self.spectrogram_size = spectrogram_size
self.patch_size = patch_size
self.num_channels = num_channels
self.num_patches = num_patches
self.patch_shape = patch_shape
self.projection = nn.Conv2d(num_channels, hidden_size, kernel_size=patch_size, stride=patch_size)
def forward(self, audio_values: torch.Tensor) -> torch.Tensor:
batch_size, num_channels, height, width = audio_values.shape
if num_channels != self.num_channels:
raise ValueError(
"Make sure that the channel dimension of the pixel values match with the one set in the configuration."
)
if height > self.spectrogram_size[0] or width != self.spectrogram_size[1]:
raise ValueError(
f"Input audio size ({height}*{width}) doesn't match model"
f" ({self.spectrogram_size[0]}*{self.spectrogram_size[1]})."
)
embeddings = self.projection(audio_values).flatten(2).transpose(1, 2)
return embeddings
# Copied from transformers.models.vilt.modeling_vilt.ViltSelfAttention with Vilt->Tvlt
class TvltSelfAttention(nn.Module):
def __init__(self, config):
super().__init__()
if config.hidden_size % config.num_attention_heads != 0 and not hasattr(config, "embedding_size"):
raise ValueError(
f"The hidden size {config.hidden_size,} is not a multiple of the number of attention "
f"heads {config.num_attention_heads}."
)
self.num_attention_heads = config.num_attention_heads
self.attention_head_size = int(config.hidden_size / config.num_attention_heads)
self.all_head_size = self.num_attention_heads * self.attention_head_size
self.query = nn.Linear(config.hidden_size, self.all_head_size, bias=config.qkv_bias)
self.key = nn.Linear(config.hidden_size, self.all_head_size, bias=config.qkv_bias)
self.value = nn.Linear(config.hidden_size, self.all_head_size, bias=config.qkv_bias)
self.dropout = nn.Dropout(config.attention_probs_dropout_prob)
def transpose_for_scores(self, x):
new_x_shape = x.size()[:-1] + (self.num_attention_heads, self.attention_head_size)
x = x.view(*new_x_shape)
return x.permute(0, 2, 1, 3)
def forward(self, hidden_states, attention_mask=None, head_mask=None, output_attentions=False):
mixed_query_layer = self.query(hidden_states)
key_layer = self.transpose_for_scores(self.key(hidden_states))
value_layer = self.transpose_for_scores(self.value(hidden_states))
query_layer = self.transpose_for_scores(mixed_query_layer)
# Take the dot product between "query" and "key" to get the raw attention scores.
attention_scores = torch.matmul(query_layer, key_layer.transpose(-1, -2))
attention_scores = attention_scores / math.sqrt(self.attention_head_size)
if attention_mask is not None:
# Apply the attention mask is (precomputed for all layers in BertModel forward() function)
attention_scores = attention_scores + attention_mask
# Normalize the attention scores to probabilities.
attention_probs = nn.Softmax(dim=-1)(attention_scores)
# This is actually dropping out entire tokens to attend to, which might
# seem a bit unusual, but is taken from the original Transformer paper.
attention_probs = self.dropout(attention_probs)
# Mask heads if we want to
if head_mask is not None:
attention_probs = attention_probs * head_mask
context_layer = torch.matmul(attention_probs, value_layer)
context_layer = context_layer.permute(0, 2, 1, 3).contiguous()
new_context_layer_shape = context_layer.size()[:-2] + (self.all_head_size,)
context_layer = context_layer.view(*new_context_layer_shape)
outputs = (context_layer, attention_probs) if output_attentions else (context_layer,)
return outputs
# Copied from transformers.models.vilt.modeling_vilt.ViltSelfOutput with Vilt->Tvlt
class TvltSelfOutput(nn.Module):
"""
The residual connection is defined in TvltLayer instead of here (as is the case with other models), due to the
layernorm applied before each block.
"""
def __init__(self, config: TvltConfig) -> None:
super().__init__()
self.dense = nn.Linear(config.hidden_size, config.hidden_size)
self.dropout = nn.Dropout(config.hidden_dropout_prob)
def forward(self, hidden_states: torch.Tensor, input_tensor: torch.Tensor) -> torch.Tensor:
hidden_states = self.dense(hidden_states)
hidden_states = self.dropout(hidden_states)
return hidden_states
# Copied from transformers.models.vilt.modeling_vilt.ViltAttention with Vilt->Tvlt
class TvltAttention(nn.Module):
def __init__(self, config):
super().__init__()
self.attention = TvltSelfAttention(config)
self.output = TvltSelfOutput(config)
self.pruned_heads = set()
def prune_heads(self, heads):
if len(heads) == 0:
return
heads, index = find_pruneable_heads_and_indices(
heads, self.attention.num_attention_heads, self.attention.attention_head_size, self.pruned_heads
)
# Prune linear layers
self.attention.query = prune_linear_layer(self.attention.query, index)
self.attention.key = prune_linear_layer(self.attention.key, index)
self.attention.value = prune_linear_layer(self.attention.value, index)
self.output.dense = prune_linear_layer(self.output.dense, index, dim=1)
# Update hyper params and store pruned heads
self.attention.num_attention_heads = self.attention.num_attention_heads - len(heads)
self.attention.all_head_size = self.attention.attention_head_size * self.attention.num_attention_heads
self.pruned_heads = self.pruned_heads.union(heads)
def forward(self, hidden_states, attention_mask=None, head_mask=None, output_attentions=False):
self_outputs = self.attention(hidden_states, attention_mask, head_mask, output_attentions)
attention_output = self.output(self_outputs[0], hidden_states)
outputs = (attention_output,) + self_outputs[1:] # add attentions if we output them
return outputs
# Copied from transformers.models.vilt.modeling_vilt.ViltIntermediate with Vilt->Tvlt
class TvltIntermediate(nn.Module):
def __init__(self, config: TvltConfig) -> None:
super().__init__()
self.dense = nn.Linear(config.hidden_size, config.intermediate_size)
if isinstance(config.hidden_act, str):
self.intermediate_act_fn = ACT2FN[config.hidden_act]
else:
self.intermediate_act_fn = config.hidden_act
def forward(self, hidden_states: torch.Tensor) -> torch.Tensor:
hidden_states = self.dense(hidden_states)
hidden_states = self.intermediate_act_fn(hidden_states)
return hidden_states
# Copied from transformers.models.vilt.modeling_vilt.ViltOutput with Vilt->Tvlt
class TvltOutput(nn.Module):
def __init__(self, config: TvltConfig) -> None:
super().__init__()
self.dense = nn.Linear(config.intermediate_size, config.hidden_size)
self.dropout = nn.Dropout(config.hidden_dropout_prob)
def forward(self, hidden_states: torch.Tensor, input_tensor: torch.Tensor) -> torch.Tensor:
hidden_states = self.dense(hidden_states)
hidden_states = self.dropout(hidden_states)
hidden_states = hidden_states + input_tensor
return hidden_states
# Copied from transformers.models.vilt.modeling_vilt.ViltLayer with Vilt->Tvlt
class TvltLayer(nn.Module):
"""This corresponds to the Block class in the timm implementation."""
def __init__(self, config):
super().__init__()
self.chunk_size_feed_forward = config.chunk_size_feed_forward
self.seq_len_dim = 1
self.attention = TvltAttention(config)
self.intermediate = TvltIntermediate(config)
self.output = TvltOutput(config)
self.layernorm_before = nn.LayerNorm(config.hidden_size, eps=config.layer_norm_eps)
self.layernorm_after = nn.LayerNorm(config.hidden_size, eps=config.layer_norm_eps)
def forward(self, hidden_states, attention_mask=None, head_mask=None, output_attentions=False):
self_attention_outputs = self.attention(
self.layernorm_before(hidden_states), # in ViLT, layernorm is applied before self-attention
attention_mask,
head_mask,
output_attentions=output_attentions,
)
attention_output = self_attention_outputs[0]
outputs = self_attention_outputs[1:] # add self attentions if we output attention weights
# first residual connection
hidden_states = attention_output + hidden_states.to(attention_output.device)
# in ViLT, layernorm is also applied after self-attention
layer_output = self.layernorm_after(hidden_states)
layer_output = self.intermediate(layer_output)
# second residual connection is done here
layer_output = self.output(layer_output, hidden_states)
outputs = (layer_output,) + outputs
return outputs
# Copied from transformers.models.vilt.modeling_vilt.ViltEncoder with Vilt->Tvlt
class TvltEncoder(nn.Module):
def __init__(self, config):
super().__init__()
self.config = config
self.layer = nn.ModuleList([TvltLayer(config) for _ in range(config.num_hidden_layers)])
self.gradient_checkpointing = False
def forward(
self,
hidden_states,
attention_mask=None,
head_mask=None,
output_attentions=False,
output_hidden_states=False,
return_dict=True,
):
all_hidden_states = () if output_hidden_states else None
all_self_attentions = () if output_attentions else None
for i, layer_module in enumerate(self.layer):
if output_hidden_states:
all_hidden_states = all_hidden_states + (hidden_states,)
layer_head_mask = head_mask[i] if head_mask is not None else None
if self.gradient_checkpointing and self.training:
def create_custom_forward(module):
def custom_forward(*inputs):
return module(*inputs, output_attentions)
return custom_forward
layer_outputs = torch.utils.checkpoint.checkpoint(
create_custom_forward(layer_module),
hidden_states,
attention_mask,
layer_head_mask,
)
else:
layer_outputs = layer_module(hidden_states, attention_mask, layer_head_mask, output_attentions)
hidden_states = layer_outputs[0]
if output_attentions:
all_self_attentions = all_self_attentions + (layer_outputs[1],)
if output_hidden_states:
all_hidden_states = all_hidden_states + (hidden_states,)
if not return_dict:
return tuple(v for v in [hidden_states, all_hidden_states, all_self_attentions] if v is not None)
return BaseModelOutput(
last_hidden_state=hidden_states,
hidden_states=all_hidden_states,
attentions=all_self_attentions,
)
class TvltPreTrainedModel(PreTrainedModel):
"""
An abstract class to handle weights initialization and a simple interface for downloading and loading pretrained
models.
"""
config_class = TvltConfig
base_model_prefix = "tvlt"
main_input_name = "pixel_values"
supports_gradient_checkpointing = True
def _init_weights(self, module):
"""Initialize the weights"""
if isinstance(module, (nn.Linear, nn.Conv2d)):
# Slightly different from the TF version which uses truncated_normal for initialization
# cf https://github.com/pytorch/pytorch/pull/5617
module.weight.data.normal_(mean=0.0, std=self.config.initializer_range)
if module.bias is not None:
module.bias.data.zero_()
elif isinstance(module, nn.LayerNorm):
module.bias.data.zero_()
module.weight.data.fill_(1.0)
def _set_gradient_checkpointing(self, module, value=False):
if isinstance(module, TvltEncoder):
module.gradient_checkpointing = value
TVLT_START_DOCSTRING = r"""
This model is a PyTorch [torch.nn.Module](https://pytorch.org/docs/stable/nn.html#torch.nn.Module) subclass. Use it
as a regular PyTorch Module and refer to the PyTorch documentation for all matter related to general usage and
behavior.
Parameters:
config ([`TvltConfig`]): Model configuration class with all the parameters of the model.
Initializing with a config file does not load the weights associated with the model, only the
configuration. Check out the [`~PreTrainedModel.from_pretrained`] method to load the model weights.
"""
TVLT_INPUTS_DOCSTRING = r"""
Args:
pixel_values (`torch.FloatTensor` of shape `(batch_size, num_frames, num_channels, height, width)`):
Pixel values. Pixel values can be obtained using [`TvltProcessor`]. See [`TvltProcessor.__call__`] for
details.
audio_values (`torch.FloatTensor` of shape `(batch_size, num_channels, height, width)`):
Audio values. Audio values can be obtained using [`TvltProcessor`]. See [`TvltProcessor.__call__`] for
details.
pixel_mask (`torch.FloatTensor` of shape `(batch_size, num_pixel_patches)`):
Pixel masks. Pixel masks can be obtained using [`TvltProcessor`]. See [`TvltProcessor.__call__`] for
details.
audio_mask (`torch.FloatTensor` of shape `(batch_size, num_audio_patches)`):
Audio masks. Audio masks can be obtained using [`TvltProcessor`]. See [`TvltProcessor.__call__`] for
details.
pixel_values_mixed (`torch.FloatTensor` of shape `(batch_size, num_frames, num_channels, height, width)`):
Pixel values that mix positive and negative samples in Tvlt vision-audio matching. Pixel values mixed can
be obtained using [`TvltProcessor`]. See [`TvltProcessor.__call__`] for details.
pixel_mask_mixed (`torch.FloatTensor` of shape `(batch_size, num_channels, height, width)`):
Pixel masks of pixel_values_mixed. Pixel masks mixed can be obtained using [`TvltProcessor`]. See
[`TvltProcessor.__call__`] for details.
mask_pixel (`bool`, *optional*):
Whether to mask pixel for MAE tasks. Only set to True in TvltForPreTraining.
mask_audio (`bool`, *optional*):
Whether to mask audio for MAE tasks. Only set to True in TvltForPreTraining.
output_attentions (`bool`, *optional*):
Whether or not to return the attentions tensors of all attention layers. See `attentions` under returned
tensors for more detail.
output_hidden_states (`bool`, *optional*):
Whether or not to return the hidden states of all layers. See `hidden_states` under returned tensors for
more detail.
return_dict (`bool`, *optional*):
Whether or not to return a [`~utils.ModelOutput`] instead of a plain tuple.
"""
@add_start_docstrings(
"The bare TVLT Model transformer outputting raw hidden-states without any specific head on top.",
TVLT_START_DOCSTRING,
)
class TvltModel(TvltPreTrainedModel):
def __init__(self, config):
super().__init__(config)
self.config = config
self.pixel_embeddings = TvltPixelEmbeddings(config)
self.audio_embeddings = TvltAudioEmbeddings(config)
self.encoder = TvltEncoder(config)
self.cls_embedding = nn.Parameter(torch.zeros(1, 1, config.hidden_size))
if config.use_mean_pooling:
self.layernorm = None
else:
self.layernorm = nn.LayerNorm(config.hidden_size, eps=config.layer_norm_eps)
# Initialize weights and apply final processing
self.post_init()
def get_input_embeddings(self):
return self.pixel_embeddings.patch_embeddings, self.audio_embeddings.patch_embeddings
def _prune_heads(self, heads_to_prune):
"""
Prunes heads of the model. heads_to_prune: dict of {layer_num: list of heads to prune in this layer} See base
class PreTrainedModel
"""
for layer, heads in heads_to_prune.items():
self.encoder.layer[layer].attention.prune_heads(heads)
@add_start_docstrings_to_model_forward(TVLT_INPUTS_DOCSTRING)
@replace_return_docstrings(output_type=TvltModelOutput, config_class=_CONFIG_FOR_DOC)
def forward(
self,
pixel_values,
audio_values,
pixel_mask=None,
audio_mask=None,
mask_pixel=False,
mask_audio=False,
output_attentions=None,
output_hidden_states=None,
return_dict=None,
) -> Union[tuple, TvltModelOutput]:
r"""
Returns:
Examples:
```python
>>> from transformers import TvltProcessor, TvltModel
>>> import numpy as np
>>> import torch
>>> num_frames = 8
>>> images = list(np.random.randn(num_frames, 3, 224, 224))
>>> audio = list(np.random.randn(10000))
>>> processor = TvltProcessor.from_pretrained("ZinengTang/tvlt-base")
>>> model = TvltModel.from_pretrained("ZinengTang/tvlt-base")
>>> input_dict = processor(images, audio, sampling_rate=44100, return_tensors="pt")
>>> outputs = model(**input_dict)
>>> loss = outputs.loss
```"""
output_attentions = output_attentions if output_attentions is not None else self.config.output_attentions
output_hidden_states = (
output_hidden_states if output_hidden_states is not None else self.config.output_hidden_states
)
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
pixel_embedding_output, pixel_mask = self.pixel_embeddings(pixel_values, pixel_mask)
audio_embedding_output, audio_mask = self.audio_embeddings(audio_values, audio_mask)
# Mask pixel if mask_pixel is True
pixel_label_masks = None
pixel_ids_restore = None
if mask_pixel:
pixel_mask_noise, pixel_len_keep = generate_pixel_mask_noise(
pixel_embedding_output, pixel_mask=pixel_mask, mask_ratio=self.config.pixel_mask_ratio
)
pixel_embedding_output, pixel_mask, pixel_label_masks, pixel_ids_restore = random_masking(
pixel_embedding_output,
pixel_mask_noise,
pixel_len_keep,
attention_masks=pixel_mask,
)
# Mask audio if mask_audio is True
audio_label_masks = None
audio_ids_restore = None
if mask_audio:
num_freq_patches = self.config.frequency_length // self.config.audio_patch_size[1]
audio_mask_noise, audio_len_keep = generate_audio_mask_noise(
audio_embedding_output,
audio_mask=audio_mask,
mask_ratio=self.config.audio_mask_ratio,
mask_type=self.config.audio_mask_type,
freq_len=num_freq_patches,
)
audio_embedding_output, audio_mask, audio_label_masks, audio_ids_restore = random_masking(
audio_embedding_output,
audio_mask_noise,
audio_len_keep,
attention_masks=audio_mask,
)
# Prepare for encoder inputs and attention masks
batch_size = pixel_values.size(0)
embedding_output = torch.cat(
[self.cls_embedding.repeat(batch_size, 1, 1), pixel_embedding_output, audio_embedding_output], 1
)
masked_pixel_len = pixel_embedding_output.size(1)
attention_mask = None
if pixel_mask is not None and audio_mask is not None:
attention_mask = torch.cat([pixel_mask[:, :1], pixel_mask, audio_mask], 1)
input_shape = embedding_output.size()
extended_attention_mask = None
if attention_mask is not None:
extended_attention_mask = self.get_extended_attention_mask(attention_mask, input_shape)
encoder_outputs = self.encoder(
embedding_output,
attention_mask=extended_attention_mask,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
sequence_output = encoder_outputs[0]
if self.layernorm is not None:
sequence_output = self.layernorm(sequence_output)
pixel_sequence_output = sequence_output[:, 1 : 1 + masked_pixel_len]
audio_sequence_output = sequence_output[:, 1 + masked_pixel_len :]
if not return_dict:
return (
sequence_output,
pixel_sequence_output,
audio_sequence_output,
pixel_label_masks,
audio_label_masks,
pixel_ids_restore,
audio_ids_restore,
) + encoder_outputs[1:]
return TvltModelOutput(
last_hidden_state=sequence_output,
last_pixel_hidden_state=pixel_sequence_output,
last_audio_hidden_state=audio_sequence_output,
pixel_label_masks=pixel_label_masks,
audio_label_masks=audio_label_masks,
pixel_ids_restore=pixel_ids_restore,
audio_ids_restore=audio_ids_restore,
hidden_states=encoder_outputs.hidden_states,
attentions=encoder_outputs.attentions,
)
class TvltDecoder(nn.Module):
def __init__(self, config):
super().__init__()
decoder_config = deepcopy(config)
decoder_config.hidden_size = config.decoder_hidden_size
decoder_config.num_hidden_layers = config.decoder_num_hidden_layers
decoder_config.num_attention_heads = config.decoder_num_attention_heads
decoder_config.intermediate_size = config.decoder_intermediate_size
self.decoder_layers = nn.ModuleList(
[TvltLayer(decoder_config) for _ in range(config.decoder_num_hidden_layers)]
)
self.layernorm = nn.LayerNorm(config.decoder_hidden_size, eps=config.layer_norm_eps)
self.gradient_checkpointing = False
self.config = config
def forward(
self,
hidden_states,
output_attentions=False,
output_hidden_states=False,
return_dict=True,
):
# apply Transformer layers (blocks)
all_hidden_states = () if output_hidden_states else None
all_self_attentions = () if output_attentions else None
for i, layer_module in enumerate(self.decoder_layers):
if output_hidden_states:
all_hidden_states = all_hidden_states + (hidden_states,)
if self.gradient_checkpointing and self.training:
def create_custom_forward(module):
def custom_forward(*inputs):
return module(*inputs, output_attentions)
return custom_forward
layer_outputs = torch.utils.checkpoint.checkpoint(
create_custom_forward(layer_module),
hidden_states,
None,
)
else:
layer_outputs = layer_module(hidden_states, output_attentions=output_attentions)
hidden_states = layer_outputs[0]
if output_attentions:
all_self_attentions = all_self_attentions + (layer_outputs[1],)
if output_hidden_states:
all_hidden_states = all_hidden_states + (hidden_states,)
# predictor projection
logits = self.layernorm(hidden_states)
if not return_dict:
return tuple(v for v in [logits, all_hidden_states, all_self_attentions] if v is not None)
return TvltDecoderOutput(logits=logits, hidden_states=all_hidden_states, attentions=all_self_attentions)
@add_start_docstrings(
"The TVLT Model transformer with the decoder on top for self-supervised pre-training.",
TVLT_START_DOCSTRING,
)
class TvltForPreTraining(TvltPreTrainedModel):
def __init__(self, config):
super().__init__(config)
self.config = config
self.task_matching = config.task_matching
self.task_mae = config.task_mae
if not (self.task_matching or self.task_mae):
raise ValueError("Must set at least one of matching task and MAE task to true")
self.tvlt = TvltModel(config)
if self.task_matching:
self.matching_head = TvltMatchingHead(config)
if self.task_mae:
self.encoder_to_decoder = nn.Linear(config.hidden_size, config.decoder_hidden_size, bias=True)
self.pixel_mask_token = nn.Parameter(torch.zeros(1, 1, config.decoder_hidden_size))
self.audio_mask_token = nn.Parameter(torch.zeros(1, 1, config.decoder_hidden_size))
self.decoder = TvltDecoder(config)
decoder_hidden_size = config.decoder_hidden_size
num_frames = config.num_frames
num_patches_per_image = self.tvlt.pixel_embeddings.num_patches_per_image
self.decoder_pixel_pos_embed = nn.Parameter(torch.zeros(1, num_patches_per_image, decoder_hidden_size))
self.decoder_temporal_embed = nn.Parameter(torch.zeros(1, config.num_frames, decoder_hidden_size))
self.decoder_pixel_type_embed = nn.Parameter(torch.zeros(1, 1, decoder_hidden_size))
num_audio_patches = self.tvlt.audio_embeddings.num_patches
num_freq_patches = config.frequency_length // config.audio_patch_size[1]
self.decoder_audio_pos_embed = nn.Parameter(
torch.zeros(1, num_audio_patches // num_freq_patches, decoder_hidden_size)
)
self.decoder_freq_embed = nn.Parameter(torch.zeros(1, num_freq_patches, decoder_hidden_size))
self.decoder_audio_type_embed = nn.Parameter(torch.zeros(1, 1, decoder_hidden_size))
pixel_mae_output_dim = self.config.image_patch_size[0] ** 2 * self.config.num_image_channels
self.pixel_mae_head = TvltMAEHead(config, pixel_mae_output_dim)
audio_mae_output_dim = (
self.config.audio_patch_size[0] * self.config.audio_patch_size[1] * self.config.num_audio_channels
)
self.audio_mae_head = TvltMAEHead(config, audio_mae_output_dim)
self.num_frames = num_frames
self.num_patches_per_image = num_patches_per_image
self.num_freq_patches = num_freq_patches
self.image_patch_size = config.image_patch_size
self.audio_patch_size = config.audio_patch_size
# Initialize weights and apply final processing
self.post_init()
def patchify_pixel(self, pixel_values):
"""
pixel_values: [batch_size, num_frames, 3, height, width]
"""
batch_size, num_frames, num_channels, height, width = pixel_values.shape
num_patches_height = pixel_values.shape[3] // self.image_patch_size[0]
num_patches_width = pixel_values.shape[4] // self.image_patch_size[1]
patchified_pixel_values = pixel_values.reshape(
shape=(
batch_size,
num_frames,
num_channels,
num_patches_height,
self.image_patch_size[0],
num_patches_width,
self.image_patch_size[1],
)
)
patchified_pixel_values = torch.einsum("ntchpwq->nthwpqc", patchified_pixel_values)
patchified_pixel_values = patchified_pixel_values.reshape(
shape=(
batch_size,
num_patches_height * num_patches_width * num_frames,
self.image_patch_size[0] * self.image_patch_size[1] * num_channels,
)
)
return patchified_pixel_values
def patchify_audio(self, audio_values):
"""
audio_values: [batch_size, 1, height, width]
"""
batch_size, num_channels, height, width = audio_values.shape
num_patches_height = height // self.audio_patch_size[0]
num_patches_width = width // self.audio_patch_size[1]
patchified_audio_values = audio_values.reshape(
shape=(
batch_size,
num_channels,
num_patches_height,
self.audio_patch_size[0],
num_patches_width,
self.audio_patch_size[1],
)
)
patchified_audio_values = torch.einsum("nchpwq->nhwpqc", patchified_audio_values)
patchified_audio_values = patchified_audio_values.reshape(
shape=(
batch_size,
num_patches_height * num_patches_width,
self.audio_patch_size[0] * self.audio_patch_size[1] * num_channels,
)
)
return patchified_audio_values
def pixel_mae_loss(self, pixel_values, pixel_predictions, mask):
patchified_pixel_values = self.patchify_pixel(pixel_values)
loss = (pixel_predictions - patchified_pixel_values) ** 2
loss = loss.mean(dim=-1) # [batch_size, pixel_pixel_length], mean loss per patch
loss = (loss * mask).sum() / mask.sum() # mean loss on removed patches
return loss
def audio_mae_loss(self, audio_values, audio_predictions, mask):
patchified_audio_values = self.patchify_audio(audio_values)
loss = (audio_predictions - patchified_audio_values) ** 2
loss = loss.mean(dim=-1) # [batch_size, audio_pixel_length], mean loss per patch
loss = (loss * mask).sum() / mask.sum() # mean loss on removed patches
return loss
def concatenate_mask(self, mask_token, sequence, ids_restore):
batch_size, seq_length, dim = sequence.shape
mask_tokens = mask_token.repeat(batch_size, ids_restore.shape[1] - seq_length, 1)
padded_sequence = torch.cat([sequence, mask_tokens], dim=1)
padded_sequence = torch.gather(
padded_sequence, dim=1, index=ids_restore.unsqueeze(-1).repeat(1, 1, dim)
) # unshuffle
return padded_sequence
@add_start_docstrings_to_model_forward(TVLT_INPUTS_DOCSTRING)
@replace_return_docstrings(output_type=TvltForPreTrainingOutput, config_class=_CONFIG_FOR_DOC)
def forward(
self,
pixel_values,
audio_values,
pixel_mask=None,
audio_mask=None,
labels=None,
pixel_values_mixed=None,
pixel_mask_mixed=None,
output_attentions=None,
output_hidden_states=None,
return_dict=None,
) -> Union[tuple, TvltForPreTrainingOutput]:
r"""
pixel_values_mixed (`torch.FloatTensor` of shape `(batch_size, num_frames, num_channels, height, width)`):
Pixel values that mix positive and negative samples in Tvlt vision-audio matching. Audio values can be
obtained using [`TvltProcessor`]. See [`TvltProcessor.__call__`] for details.
pixel_mask_mixed (`torch.FloatTensor` of shape `(batch_size, num_channels, height, width)`):
Pixel masks of pixel_values_mixed. Pixel values mixed can be obtained using [`TvltProcessor`]. See
[`TvltProcessor.__call__`] for details.
labels (`torch.LongTensor` of shape `(batch_size, num_labels)`, *optional*):
Labels for computing the vision audio matching loss. Indices should be in `[0, 1]`. num_labels has to be 1.
Return:
Examples:
```python
>>> from transformers import TvltProcessor, TvltForPreTraining
>>> import numpy as np
>>> import torch
>>> num_frames = 8
>>> images = list(np.random.randn(num_frames, 3, 224, 224))
>>> images_mixed = list(np.random.randn(num_frames, 3, 224, 224))
>>> audio = list(np.random.randn(10000))
>>> processor = TvltProcessor.from_pretrained("ZinengTang/tvlt-base")
>>> model = TvltForPreTraining.from_pretrained("ZinengTang/tvlt-base")
>>> input_dict = processor(
... images, audio, images_mixed, sampling_rate=44100, mask_pixel=True, mask_audio=True, return_tensors="pt"
... )
>>> outputs = model(**input_dict)
>>> loss = outputs.loss
```"""
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
total_loss = 0.0
if self.task_matching:
if labels is None:
raise ValueError("Matching task requires labels")
if pixel_values_mixed is None:
raise ValueError("Matching task requires pixel_values_mixed")
outputs = self.tvlt(
pixel_values_mixed,
audio_values,
pixel_mask=pixel_mask_mixed,
audio_mask=audio_mask,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
sequence_output = outputs[0]
matching_logits = self.matching_head(sequence_output)
loss_fct = BCEWithLogitsLoss()
loss = loss_fct(matching_logits.view(-1), labels.view(-1))
total_loss += loss
pixel_logits = None
audio_logits = None
if self.task_mae and self.training:
outputs = self.tvlt(
pixel_values,
audio_values,
pixel_mask=pixel_mask,
audio_mask=audio_mask,
mask_pixel=True,
mask_audio=True,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
pixel_sequence_output = outputs.last_pixel_hidden_state if return_dict else outputs[1]
audio_sequence_output = outputs.last_audio_hidden_state if return_dict else outputs[2]
pixel_label_masks = outputs.pixel_label_masks if return_dict else outputs[3]
audio_label_masks = outputs.audio_label_masks if return_dict else outputs[4]
pixel_ids_restore = outputs.pixel_ids_restore if return_dict else outputs[5]
audio_ids_restore = outputs.audio_ids_restore if return_dict else outputs[6]
pixel_decoder_input = self.encoder_to_decoder(
pixel_sequence_output
) # [batch_size, num_masked_pixel_patches, decoder_hidden_size]
audio_decoder_input = self.encoder_to_decoder(
audio_sequence_output
) # [batch_size, num_masked_audio_patches, decoder_hidden_size]
num_frames = pixel_values.size(1)
pixel_decoder_input = self.concatenate_mask(self.pixel_mask_token, pixel_decoder_input, pixel_ids_restore)
pixel_decoder_input = pixel_decoder_input + self.decoder_pixel_pos_embed.repeat(1, num_frames, 1)
pixel_decoder_input = pixel_decoder_input + torch.repeat_interleave(
self.decoder_temporal_embed[:, :num_frames], self.num_patches_per_image, dim=1
)
pixel_decoder_input = pixel_decoder_input + self.decoder_pixel_type_embed
pixel_decoder_outputs = self.decoder(pixel_decoder_input)
pixel_logits = self.pixel_mae_head(pixel_decoder_outputs.logits)
audio_decoder_input = self.concatenate_mask(self.audio_mask_token, audio_decoder_input, audio_ids_restore)
num_time_patches = audio_decoder_input.size(1) // self.num_freq_patches
audio_decoder_input = audio_decoder_input + self.decoder_freq_embed.repeat(1, num_time_patches, 1)
audio_decoder_input = audio_decoder_input + torch.repeat_interleave(
self.decoder_audio_pos_embed[:, :num_time_patches], self.num_freq_patches, dim=1
)
audio_decoder_input = audio_decoder_input + self.decoder_audio_type_embed
audio_decoder_outputs = self.decoder(audio_decoder_input)
audio_logits = self.audio_mae_head(audio_decoder_outputs.logits)
loss = self.pixel_mae_loss(pixel_values, pixel_logits, pixel_label_masks) + self.audio_mae_loss(
audio_values, audio_logits, audio_label_masks
)
total_loss += loss
if not return_dict:
output = (matching_logits, pixel_logits, audio_logits) + outputs[7:]
return ((total_loss,) + output) if loss is not None else output
return TvltForPreTrainingOutput(
loss=total_loss,
matching_logits=matching_logits,
pixel_logits=pixel_logits,
audio_logits=audio_logits,
hidden_states=outputs.hidden_states,
attentions=outputs.attentions,
)
class TvltPooler(nn.Module):
def __init__(self, config):
super().__init__()
self.dense = nn.Linear(config.hidden_size, config.hidden_size)
self.activation = nn.Tanh()
def forward(self, hidden_states):
first_token_tensor = hidden_states[:, 0]
pooled_output = self.dense(first_token_tensor)
pooled_output = self.activation(pooled_output)
return pooled_output
class TvltMatchingHead(nn.Module):
def __init__(self, config):
super().__init__()
self.pooler = TvltPooler(config)
self.fc = nn.Linear(config.hidden_size, 1)
def forward(self, hidden_states):
hidden_states = self.fc(self.pooler(hidden_states))
return hidden_states
class TvltMAEHead(nn.Module):
def __init__(self, config, output_dim=None):
super().__init__()
self.config = config
self.decoder = nn.Linear(config.decoder_hidden_size, output_dim)
def forward(self, hidden_states):
hidden_states = self.decoder(hidden_states)
return hidden_states
@add_start_docstrings(
"""
Tvlt Model transformer with a classifier head on top (an MLP on top of the final hidden state of the [CLS] token)
for audiovisual classification tasks, e.g. CMU-MOSEI Sentiment Analysis and Audio to Video Retrieval.
""",
TVLT_START_DOCSTRING,
)
class TvltForAudioVisualClassification(TvltPreTrainedModel):
def __init__(self, config):
super().__init__(config)
self.tvlt = TvltModel(config)
# Classifier head
self.classifier = nn.Sequential(
nn.Linear(config.hidden_size, config.hidden_size * 2),
nn.LayerNorm(config.hidden_size * 2, eps=config.layer_norm_eps),
nn.GELU(),
nn.Linear(config.hidden_size * 2, config.num_labels),
)
self.config = config
# Initialize weights and apply final processing
self.post_init()
@add_start_docstrings_to_model_forward(TVLT_INPUTS_DOCSTRING)
@replace_return_docstrings(output_type=SequenceClassifierOutput, config_class=_CONFIG_FOR_DOC)
def forward(
self,
pixel_values,
audio_values,
pixel_mask=None,
audio_mask=None,
output_attentions=None,
output_hidden_states=None,
return_dict=None,
labels=None,
) -> Union[tuple, SequenceClassifierOutput]:
r"""
labels (`torch.LongTensor` of shape `(batch_size, num_labels)`, *optional*):
Labels for computing the audiovisual loss. Indices should be in `[0, ..., num_classes-1]` where num_classes
refers to the number of classes in audiovisual tasks.
Return:
Examples:
```python
>>> from transformers import TvltProcessor, TvltForAudioVisualClassification
>>> import numpy as np
>>> import torch
>>> num_frames = 8
>>> images = list(np.random.randn(num_frames, 3, 224, 224))
>>> audio = list(np.random.randn(10000))
>>> processor = TvltProcessor.from_pretrained("ZinengTang/tvlt-base")
>>> model = TvltForAudioVisualClassification.from_pretrained("ZinengTang/tvlt-base")
>>> input_dict = processor(images, audio, sampling_rate=44100, return_tensors="pt")
>>> outputs = model(**input_dict)
>>> loss = outputs.loss
```"""
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
outputs = self.tvlt(
pixel_values,
audio_values,
pixel_mask=pixel_mask,
audio_mask=audio_mask,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
sequence_output = outputs[0][:, 0]
logits = self.classifier(sequence_output) # rank value
loss = None
if labels is not None:
if self.config.loss_type == "regression":
loss_fct = MSELoss()
loss = loss_fct(logits, labels)
elif self.config.loss_type == "classification":
loss_fct = CrossEntropyLoss()
loss = loss_fct(logits, labels)
if not return_dict:
output = (logits,) + outputs[4:]
return ((loss,) + output) if loss is not None else output
return SequenceClassifierOutput(
loss=loss,
logits=logits,
hidden_states=outputs.hidden_states,
attentions=outputs.attentions,
)
| 57,262 | 42.446889 | 159 | py |
transformers | transformers-main/src/transformers/models/tvlt/__init__.py | # flake8: noqa
# There's no way to ignore "F401 '...' imported but unused" warnings in this
# module, but to preserve other warnings. So, don't check this module at all.
# Copyright 2023 The HuggingFace Team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
from typing import TYPE_CHECKING
from ...utils import (
OptionalDependencyNotAvailable,
_LazyModule,
is_torch_available,
is_vision_available,
)
_import_structure = {
"configuration_tvlt": ["TVLT_PRETRAINED_CONFIG_ARCHIVE_MAP", "TvltConfig"],
"feature_extraction_tvlt": ["TvltFeatureExtractor"],
"processing_tvlt": ["TvltProcessor"],
}
try:
if not is_torch_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
_import_structure["modeling_tvlt"] = [
"TVLT_PRETRAINED_MODEL_ARCHIVE_LIST",
"TvltModel",
"TvltForPreTraining",
"TvltForAudioVisualClassification",
"TvltPreTrainedModel",
]
try:
if not is_vision_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
_import_structure["image_processing_tvlt"] = ["TvltImageProcessor"]
if TYPE_CHECKING:
from .configuration_tvlt import TVLT_PRETRAINED_CONFIG_ARCHIVE_MAP, TvltConfig
from .processing_tvlt import TvltProcessor
from .feature_extraction_tvlt import TvltFeatureExtractor
try:
if not is_torch_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
from .modeling_tvlt import (
TVLT_PRETRAINED_MODEL_ARCHIVE_LIST,
TvltForAudioVisualClassification,
TvltForPreTraining,
TvltModel,
TvltPreTrainedModel,
)
try:
if not is_vision_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
from .image_processing_tvlt import TvltImageProcessor
else:
import sys
sys.modules[__name__] = _LazyModule(__name__, globals()["__file__"], _import_structure, module_spec=__spec__)
| 2,687 | 29.202247 | 113 | py |
transformers | transformers-main/src/transformers/models/tvlt/feature_extraction_tvlt.py | # coding=utf-8
# Copyright 2023 The HuggingFace Inc. team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
"""Feature extractor class for TVLT."""
from math import ceil
from typing import List, Optional, Union
import numpy as np
from ...audio_utils import mel_filter_bank, spectrogram, window_function
from ...feature_extraction_sequence_utils import BatchFeature, SequenceFeatureExtractor
from ...utils import TensorType, logging
logger = logging.get_logger(__name__)
class TvltFeatureExtractor(SequenceFeatureExtractor):
r"""
Constructs a TVLT audio feature extractor. This feature extractor can be used to prepare audios for the model.
This feature extractor inherits from [`FeatureExtractionMixin`] which contains most of the main methods. Users
should refer to this superclass for more information regarding those methods.
Args:
spectrogram_length (`Dict[str, int]` *optional*, defaults to 2048):
The time length of each audio spectrogram.
num_channels (`int` *optional*, defaults to 1):
Number of audio channels.
patch_size (`List[int]` *optional*, defaults to `[16, 16]`):
The patch size of audio patch embedding.
feature_size (`int`, defaults to 128):
The frequency length of audio spectrogram.
sampling_rate (`int`, defaults to 44100):
The sampling rate at which the audio files should be digitalized expressed in Hertz (Hz).
hop_length_to_sampling_rate (`int`, defaults to 86):
Hop length is length of the overlaping windows for the STFT used to obtain the Mel Frequency coefficients.
For example, with sampling rate 44100, the hop length is 512, with 44100 / 512 = 86
n_fft (`int`, defaults to 2048):
Size of the Fourier transform.
padding_value (`float`, *optional*, defaults to 0.0):
Padding value used to pad the audio. Should correspond to silences.
"""
model_input_names = ["audio_values", "audio_mask"]
def __init__(
self,
spectrogram_length=2048,
num_channels=1,
patch_size=[16, 16],
feature_size=128,
sampling_rate=44100,
hop_length_to_sampling_rate=86,
n_fft=2048,
padding_value=0.0,
**kwargs,
):
super().__init__(
feature_size=feature_size,
sampling_rate=sampling_rate,
padding_value=padding_value,
**kwargs,
)
self.spectrogram_length = spectrogram_length
self.num_channels = num_channels
self.patch_size = patch_size
self.freq_len = feature_size // self.patch_size[1]
self.n_fft = n_fft
self.hop_length = sampling_rate // hop_length_to_sampling_rate
self.sampling_rate = sampling_rate
self.padding_value = padding_value
self.mel_filters = mel_filter_bank(
num_frequency_bins=1 + n_fft // 2,
num_mel_filters=feature_size,
min_frequency=0.0,
max_frequency=22050.0,
sampling_rate=sampling_rate,
norm="slaney",
mel_scale="slaney",
).T
def _np_extract_fbank_features(self, waveform: np.array) -> np.ndarray:
"""
Compute the log-mel spectrogram of the provided audio, gives similar results to Whisper's original torch
implementation with 1e-5 tolerance.
"""
log_spec = spectrogram(
waveform,
window_function(self.n_fft, "hann"),
frame_length=self.n_fft,
hop_length=self.hop_length,
power=2.0,
mel_filters=self.mel_filters.T,
log_mel="dB",
db_range=80.0,
)
log_spec = log_spec[:, :-1]
log_spec = log_spec - 20.0
log_spec = np.clip(log_spec / 40.0, -2.0, 0.0) + 1.0
return log_spec
def __call__(
self,
raw_speech: Union[np.ndarray, List[float], List[np.ndarray], List[List[float]]],
return_tensors: Optional[Union[str, TensorType]] = None,
return_attention_mask: Optional[bool] = True,
sampling_rate: Optional[int] = None,
resample: bool = False,
mask_audio: bool = False,
**kwargs,
) -> BatchFeature:
"""
Main method to prepare one or several audio(s) for the model.
Args:
raw_speech (`np.ndarray`, `List[float]`, `List[np.ndarray]`, `List[List[float]]`):
The sequence or batch of sequences to be padded. Each sequence can be a numpy array, a list of float
values, a list of numpy arrays or a list of list of float values. Must be mono channel audio, not
stereo, i.e. single float per timestep.
return_tensors (`str` or [`~utils.TensorType`], *optional*):
If set, will return tensors instead of list of python integers. Acceptable values are:
- `'pt'`: Return PyTorch `torch.Tensor` objects.
- `'np'`: Return Numpy `np.ndarray` objects.
return_attention_mask (`bool`, *optional*, default to `True`):
Whether to return the attention mask. If left to the default, will return the attention mask according
to the specific feature_extractor's default. [What are attention masks?](../glossary#attention-mask)
<Tip>
For TvltTransformer models, `attention_mask` should alwys be passed for batched inference, to avoid
subtle bugs.
</Tip>
sampling_rate (`int`, *optional*):
The sampling rate at which the `raw_speech` input was sampled. It is strongly recommended to pass
`sampling_rate` at the forward call to prevent silent errors and allow automatic speech recognition
pipeline. Current model supports sampling rate 16000 and 44100.
resample (`bool`, *optional*, defaults to `False`):
If the sampling rate is not matched, resample the input audio to match.
mask_audio (`bool`, *optional*, defaults to `False`):
Whether or not to mask input audio for MAE task.
Returns:
[`BatchFeature`]: A [`BatchFeature`] with the following fields:
- **audio_values** -- Audio values to be fed to a model, of shape (batch_size, num_channels, height,
width).
- **audio_mask** -- Audio masks to be fed to a model, of shape (batch_size, num_audio_patches).
"""
if sampling_rate is not None:
if sampling_rate != self.sampling_rate:
raise ValueError(
"This feature extractor is set to support sampling rate"
f" of {self.sampling_rate}. Please make sure that the provided `raw_speech` input was sampled"
f" with {self.sampling_rate} and not {sampling_rate}."
)
else:
logger.warning(
"It is strongly recommended to pass the `sampling_rate` argument to this function. "
"Failing to do so can result in silent errors that might be hard to debug."
)
is_batched_numpy = isinstance(raw_speech, np.ndarray) and len(raw_speech.shape) > 1
if is_batched_numpy and len(raw_speech.shape) > 2:
raise ValueError(f"Only mono-channel audio is supported for input to {self}")
is_batched = is_batched_numpy or (
isinstance(raw_speech, (list, tuple)) and (isinstance(raw_speech[0], (np.ndarray, tuple, list)))
)
if is_batched:
raw_speech = [np.asarray([speech], dtype=np.float32).T for speech in raw_speech]
elif not is_batched and not isinstance(raw_speech, np.ndarray):
raw_speech = np.asarray(raw_speech, dtype=np.float32)
elif isinstance(raw_speech, np.ndarray) and raw_speech.dtype is np.dtype(np.float64):
raw_speech = raw_speech.astype(np.float32)
# always return batch
if not is_batched:
raw_speech = [np.asarray([raw_speech]).T]
# Convert audio signals to log mel spectrograms, truncate by time axis
audio_features = [
self._np_extract_fbank_features(waveform.squeeze()).T[: self.spectrogram_length] for waveform in raw_speech
]
if isinstance(audio_features[0], List):
audio_features = [np.asarray(feature, dtype=np.float32) for feature in audio_features]
# Create audio attention mask
max_patch_len = max(
[ceil(feature.shape[0] / self.patch_size[0]) * self.freq_len for feature in audio_features]
) # The maximum number of audio patches in a batch
if return_attention_mask:
audio_mask = [
(ceil(feature.shape[0] / self.patch_size[0]) * self.freq_len) * [1]
+ (max_patch_len - ceil(feature.shape[0] / self.patch_size[0]) * self.freq_len) * [0]
for feature in audio_features
]
audio_mask = np.array(audio_mask).astype(np.float32)
# convert into correct format for padding
max_time_len = max_patch_len // self.freq_len * self.patch_size[0] # The maximum audio size in a batch
padded_audio_features = np.ones([len(audio_features), 1, max_time_len, self.feature_size]).astype(np.float32)
padded_audio_features = padded_audio_features * self.padding_value
for i in range(len(audio_features)):
feature = audio_features[i]
padded_audio_features[i, :, : feature.shape[0], :] = feature
# return as BatchFeature
if return_attention_mask:
data = {"audio_values": padded_audio_features, "audio_mask": audio_mask}
else:
data = {"audio_values": padded_audio_features}
encoded_inputs = BatchFeature(data=data, tensor_type=return_tensors)
return encoded_inputs
| 10,507 | 44.489177 | 119 | py |
transformers | transformers-main/src/transformers/models/esm/convert_esm.py | # coding=utf-8
# Copyright 2022 The HuggingFace Inc. team.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
"""Convert ESM checkpoint."""
import argparse
import pathlib
from pathlib import Path
from tempfile import TemporaryDirectory
import esm as esm_module
import torch
from esm.esmfold.v1.misc import batch_encode_sequences as esmfold_encode_sequences
from esm.esmfold.v1.pretrained import esmfold_v1
from transformers.models.esm.configuration_esm import EsmConfig, EsmFoldConfig
from transformers.models.esm.modeling_esm import (
EsmForMaskedLM,
EsmForSequenceClassification,
EsmIntermediate,
EsmLayer,
EsmOutput,
EsmSelfAttention,
EsmSelfOutput,
)
from transformers.models.esm.modeling_esmfold import EsmForProteinFolding
from transformers.models.esm.tokenization_esm import EsmTokenizer
from transformers.utils import logging
logging.set_verbosity_info()
logger = logging.get_logger(__name__)
SAMPLE_DATA = [
(
"protein1",
"MNGTEGPNFYVPFSNATGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVLGGFTSTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLAGWSRYIPEGLQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIIIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTIPAFFAKSAAIYNPVIYIMMNKQFRNCMLTTICCGKNPLGDDEASATVSKTETSQVAPA",
),
("protein2", "MKTVRQERLKSIVRILERSKEPVSGAQLAEELSVSRQVIVQDIAYLRSLGYNIVATPRGYVLA"),
("protein3", "MKTVRQERLKSI<mask>RILERSKEPVSGAQLAEELS<mask>SRQVIVQDIAYLRSLGYN<mask>VATPRGYVLAGG"),
("protein4", "MKTVRQERLKSI<mask>RILERSKEPVSGAQLAEELS<mask>SRQVIVQDIAYLRSLGYN<mask>VATPRGYVLA"),
]
MODEL_MAPPING = {
"esm1b_t33_650M_UR50S": esm_module.pretrained.esm1b_t33_650M_UR50S,
"esm1v_t33_650M_UR90S_1": esm_module.pretrained.esm1v_t33_650M_UR90S_1,
"esm1v_t33_650M_UR90S_2": esm_module.pretrained.esm1v_t33_650M_UR90S_2,
"esm1v_t33_650M_UR90S_3": esm_module.pretrained.esm1v_t33_650M_UR90S_3,
"esm1v_t33_650M_UR90S_4": esm_module.pretrained.esm1v_t33_650M_UR90S_4,
"esm1v_t33_650M_UR90S_5": esm_module.pretrained.esm1v_t33_650M_UR90S_5,
"esm2_t48_15B_UR50D": esm_module.pretrained.esm2_t48_15B_UR50D,
"esm2_t36_3B_UR50D": esm_module.pretrained.esm2_t36_3B_UR50D,
"esm2_t33_650M_UR50D": esm_module.pretrained.esm2_t33_650M_UR50D,
"esm2_t30_150M_UR50D": esm_module.pretrained.esm2_t30_150M_UR50D,
"esm2_t12_35M_UR50D": esm_module.pretrained.esm2_t12_35M_UR50D,
"esm2_t6_8M_UR50D": esm_module.pretrained.esm2_t6_8M_UR50D,
"esmfold_v1": esmfold_v1,
}
restypes = list("ARNDCQEGHILKMFPSTWYV")
restypes_with_x = restypes + ["X"]
restypes_with_extras = restypes_with_x + ["<pad>", "<mask>", "<cls>", "<sep>", "<eos>"]
def get_esmfold_tokenizer():
with TemporaryDirectory() as tempdir:
vocab = "\n".join(restypes_with_extras)
vocab_file = Path(tempdir) / "vocab.txt"
vocab_file.write_text(vocab)
hf_tokenizer = EsmTokenizer(vocab_file=str(vocab_file))
hf_tokenizer.pad_token_id = 0 # Overlaps with 'A' but that seems to be what they want
return hf_tokenizer
def transfer_and_check_weights(original_module, our_module):
status = our_module.load_state_dict(original_module.state_dict())
if status.missing_keys:
raise ValueError(f"Missing keys: {status.missing_keys}")
if status.unexpected_keys:
raise ValueError(f"Unexpected keys: {status.unexpected_keys}")
def convert_esm_checkpoint_to_pytorch(
model: str, pytorch_dump_folder_path: str, classification_head: bool, push_to_repo: str, auth_token: str
):
"""
Copy/paste/tweak esm's weights to our BERT structure.
"""
if model.startswith("esmfold"):
esm = MODEL_MAPPING[model]()
else:
esm, alphabet = MODEL_MAPPING[model]()
esm.eval() # disable dropout
if model.startswith("esmfold"):
embed_dim = esm.esm.embed_dim
num_layers = esm.esm.num_layers
num_attention_heads = esm.esm.attention_heads
intermediate_size = 4 * embed_dim
token_dropout = esm.esm.token_dropout
emb_layer_norm_before = False # This code path does not exist in ESM-2
position_embedding_type = "rotary"
is_folding_model = True
esmfold_config = EsmFoldConfig()
for key, val in esm.cfg.items():
if hasattr(esmfold_config, key) and key != "trunk":
setattr(esmfold_config, key, val)
for key, val in esm.cfg.trunk.items():
if hasattr(esmfold_config.trunk, key) and key != "structure_module":
setattr(esmfold_config.trunk, key, val)
for key, val in esm.cfg.trunk.structure_module.items():
if hasattr(esmfold_config.trunk.structure_module, key):
setattr(esmfold_config.trunk.structure_module, key, val)
elif hasattr(esm, "args"):
# Indicates an ESM-1b or ESM-1v model
embed_dim = esm.args.embed_dim
num_layers = esm.args.layers
num_attention_heads = esm.args.attention_heads
intermediate_size = esm.args.ffn_embed_dim
token_dropout = esm.args.token_dropout
emb_layer_norm_before = True if esm.emb_layer_norm_before else False
position_embedding_type = "absolute"
is_folding_model = False
esmfold_config = None
else:
# Indicates an ESM-2 model
embed_dim = esm.embed_dim
num_layers = esm.num_layers
num_attention_heads = esm.attention_heads
intermediate_size = 4 * embed_dim # This is hardcoded in ESM-2
token_dropout = esm.token_dropout
emb_layer_norm_before = False # This code path does not exist in ESM-2
position_embedding_type = "rotary"
is_folding_model = False
esmfold_config = None
if is_folding_model:
alphabet = esm.esm.alphabet
vocab_list = tuple(alphabet.all_toks)
mask_token_id = alphabet.mask_idx
pad_token_id = alphabet.padding_idx
if is_folding_model:
original_esm_model = esm.esm
else:
original_esm_model = esm
config = EsmConfig(
vocab_size=original_esm_model.embed_tokens.num_embeddings,
mask_token_id=mask_token_id,
hidden_size=embed_dim,
num_hidden_layers=num_layers,
num_attention_heads=num_attention_heads,
intermediate_size=intermediate_size,
max_position_embeddings=1026,
layer_norm_eps=1e-5, # PyTorch default used in fairseq
attention_probs_dropout_prob=0.0,
hidden_dropout_prob=0.0,
pad_token_id=pad_token_id,
emb_layer_norm_before=emb_layer_norm_before,
token_dropout=token_dropout,
position_embedding_type=position_embedding_type,
is_folding_model=is_folding_model,
esmfold_config=esmfold_config,
vocab_list=vocab_list,
)
if classification_head:
config.num_labels = esm.classification_heads["mnli"].out_proj.weight.shape[0]
print("Our ESM config:", config)
if model.startswith("esmfold"):
model_class = EsmForProteinFolding
elif classification_head:
model_class = EsmForSequenceClassification
else:
model_class = EsmForMaskedLM
model = model_class(config)
model.eval()
# Now let's copy all the weights.
# Embeddings
model.esm.embeddings.word_embeddings.weight = original_esm_model.embed_tokens.weight
if position_embedding_type == "absolute":
model.esm.embeddings.position_embeddings.weight = original_esm_model.embed_positions.weight
if config.emb_layer_norm_before:
model.esm.embeddings.layer_norm.weight = original_esm_model.emb_layer_norm_before.weight
model.esm.embeddings.layer_norm.bias = original_esm_model.emb_layer_norm_before.bias
model.esm.encoder.emb_layer_norm_after.weight = original_esm_model.emb_layer_norm_after.weight
model.esm.encoder.emb_layer_norm_after.bias = original_esm_model.emb_layer_norm_after.bias
for i in range(config.num_hidden_layers):
# Encoder: start of layer
layer: EsmLayer = model.esm.encoder.layer[i]
# esm_layer: TransformerSentenceEncoderLayer = original_esm_model.layers[i]
esm_layer = original_esm_model.layers[i]
# self attention
self_attn: EsmSelfAttention = layer.attention.self
assert (
esm_layer.self_attn.k_proj.weight.data.shape
== esm_layer.self_attn.q_proj.weight.data.shape
== esm_layer.self_attn.v_proj.weight.data.shape
== torch.Size((config.hidden_size, config.hidden_size))
)
self_attn.query.weight.data = esm_layer.self_attn.q_proj.weight
self_attn.query.bias.data = esm_layer.self_attn.q_proj.bias
self_attn.key.weight.data = esm_layer.self_attn.k_proj.weight
self_attn.key.bias.data = esm_layer.self_attn.k_proj.bias
self_attn.value.weight.data = esm_layer.self_attn.v_proj.weight
self_attn.value.bias.data = esm_layer.self_attn.v_proj.bias
if getattr(esm_layer.self_attn, "rot_emb", None) is not None:
# Matt: Although inv_freq is not a trainable weight, it is computed at model init and cached.
# During the training of ESM-2 the model was converted to float16 precision, which also converts
# the inv_freq tensor, and the loss of precision remains even if the model is loaded later as float32.
# If we recompute inv_freq without this loss of precision then we will get subtly different rotary
# embeddings, which are enough to cause significant discrepancies in model outputs. To avoid this,
# we make sure the new model copies the data from the old inv_freq.
self_attn.rotary_embeddings.inv_freq.data = esm_layer.self_attn.rot_emb.inv_freq
# LayerNorm changes for pre-activation
layer.attention.LayerNorm.weight = esm_layer.self_attn_layer_norm.weight
layer.attention.LayerNorm.bias = esm_layer.self_attn_layer_norm.bias
layer.LayerNorm.weight = esm_layer.final_layer_norm.weight
layer.LayerNorm.bias = esm_layer.final_layer_norm.bias
# self-attention output
self_output: EsmSelfOutput = layer.attention.output
assert self_output.dense.weight.shape == esm_layer.self_attn.out_proj.weight.shape
self_output.dense.weight = esm_layer.self_attn.out_proj.weight
self_output.dense.bias = esm_layer.self_attn.out_proj.bias
# intermediate
intermediate: EsmIntermediate = layer.intermediate
assert intermediate.dense.weight.shape == esm_layer.fc1.weight.shape
intermediate.dense.weight = esm_layer.fc1.weight
intermediate.dense.bias = esm_layer.fc1.bias
# output
bert_output: EsmOutput = layer.output
assert bert_output.dense.weight.shape == esm_layer.fc2.weight.shape
bert_output.dense.weight = esm_layer.fc2.weight
bert_output.dense.bias = esm_layer.fc2.bias
# end of layer
if is_folding_model:
model.esm_s_combine.data = esm.esm_s_combine.data
model.af2_to_esm.data = esm.af2_to_esm.data
transfer_and_check_weights(esm.embedding, model.embedding)
transfer_and_check_weights(esm.esm_s_mlp, model.esm_s_mlp)
transfer_and_check_weights(esm.trunk, model.trunk)
transfer_and_check_weights(esm.distogram_head, model.distogram_head)
transfer_and_check_weights(esm.ptm_head, model.ptm_head)
transfer_and_check_weights(esm.lm_head, model.lm_head)
transfer_and_check_weights(esm.lddt_head, model.lddt_head)
elif classification_head:
model.classifier.dense.weight = esm.esm.classification_heads["mnli"].dense.weight
model.classifier.dense.bias = esm.classification_heads["mnli"].dense.bias
model.classifier.out_proj.weight = esm.classification_heads["mnli"].out_proj.weight
model.classifier.out_proj.bias = esm.classification_heads["mnli"].out_proj.bias
else:
# LM Head
model.lm_head.dense.weight = esm.lm_head.dense.weight
model.lm_head.dense.bias = esm.lm_head.dense.bias
model.lm_head.layer_norm.weight = esm.lm_head.layer_norm.weight
model.lm_head.layer_norm.bias = esm.lm_head.layer_norm.bias
model.lm_head.decoder.weight = esm.lm_head.weight
model.lm_head.bias = esm.lm_head.bias
# Contact prediction head
transfer_and_check_weights(esm.contact_head, model.esm.contact_head)
# Prepare data (first 2 sequences from ESMStructuralSplitDataset superfamily / 4)
if is_folding_model:
# Folding models aren't trained on masked inputs and don't like mask tokens.
sample_data = SAMPLE_DATA[:2]
else:
sample_data = SAMPLE_DATA
if is_folding_model:
hf_tokenizer = get_esmfold_tokenizer()
hf_tokens = hf_tokenizer(
[row[1] for row in sample_data], return_tensors="pt", padding=True, add_special_tokens=False
)
esmfold_aas, esmfold_mask, _, _, _ = esmfold_encode_sequences([row[1] for row in sample_data])
success = torch.all(hf_tokens["input_ids"] == esmfold_aas) and torch.all(
hf_tokens["attention_mask"] == esmfold_mask
)
else:
# Let's check that we get the same results.
batch_converter = alphabet.get_batch_converter()
batch_labels, batch_strs, batch_tokens = batch_converter(sample_data)
# Prepare tokenizer and make sure it matches
with TemporaryDirectory() as tempdir:
vocab = "\n".join(alphabet.all_toks)
vocab_file = Path(tempdir) / "vocab.txt"
vocab_file.write_text(vocab)
hf_tokenizer = EsmTokenizer(vocab_file=str(vocab_file))
hf_tokens = hf_tokenizer([row[1] for row in sample_data], return_tensors="pt", padding=True)
success = torch.all(hf_tokens["input_ids"] == batch_tokens)
print("Do both models tokenizers output the same tokens?", "🔥" if success else "💩")
if not success:
raise Exception("Tokenization does not match!")
with torch.no_grad():
if is_folding_model:
# Let's test the model in parts
# ESMFold always converts the ESM stem to float16, which requires float16 ops
# that don't exist on CPU. Therefore, to test it we need to run it on GPU. However,
# ESMFold is what we in the community call a "big boy" and so we desperately avoid putting both the
# original and the converted model on the GPU at the same time.
their_output = esm.cuda().infer([row[1] for row in sample_data])
our_output = model.cuda()(
input_ids=hf_tokens["input_ids"].cuda(), attention_mask=hf_tokens["attention_mask"].cuda()
)
else:
our_output = model(**hf_tokens, output_hidden_states=True)
our_output = our_output["logits"]
if classification_head:
their_output = esm.model.classification_heads["mnli"](esm.extract_features(batch_tokens))
else:
their_output = esm(hf_tokens["input_ids"], repr_layers=list(range(999)))
their_output = their_output["logits"]
if is_folding_model:
max_absolute_diff = torch.max(torch.abs(our_output["positions"] - their_output["positions"])).item()
success = torch.allclose(our_output["positions"], their_output["positions"], atol=1e-5)
else:
max_absolute_diff = torch.max(torch.abs(our_output - their_output)).item()
success = torch.allclose(our_output, their_output, atol=1e-5)
print(f"max_absolute_diff = {max_absolute_diff}") # ~ 1e-5
print("Do both models output the same tensors?", "🔥" if success else "💩")
if not success:
raise Exception("Something went wRoNg")
if not is_folding_model:
# Let's check contact prediction too
our_output = model.predict_contacts(hf_tokens["input_ids"], hf_tokens["attention_mask"])
their_output = esm.predict_contacts(hf_tokens["input_ids"])
max_absolute_diff = torch.max(torch.abs(our_output - their_output)).item()
success = torch.allclose(our_output, their_output, atol=1e-5)
print("Contact prediction testing:")
print(f"max_absolute_diff = {max_absolute_diff}") # ~ 1e-5
print("Do both models output the same tensors?", "🔥" if success else "💩")
if not success:
raise Exception("Something went wRoNg")
pathlib.Path(pytorch_dump_folder_path).mkdir(parents=True, exist_ok=True)
print(f"Saving model to {pytorch_dump_folder_path}")
model.save_pretrained(pytorch_dump_folder_path)
del esm # Free up some memory before continuing
print(f"Saving tokenizer to {pytorch_dump_folder_path}")
hf_tokenizer.save_pretrained(pytorch_dump_folder_path)
if push_to_repo:
model.push_to_hub(repo_id=push_to_repo, use_auth_token=auth_token)
hf_tokenizer.push_to_hub(repo_id=push_to_repo, use_auth_token=auth_token)
if __name__ == "__main__":
parser = argparse.ArgumentParser()
# Required parameters
parser.add_argument(
"--pytorch_dump_folder_path", type=str, required=True, help="Path to the output PyTorch model."
)
parser.add_argument(
"--classification_head", action="store_true", help="Whether to convert a final classification head."
)
parser.add_argument("--model", default=None, type=str, required=True, help="Name of model to convert.")
parser.add_argument("--push_to_repo", type=str, help="Repo to upload to (including username!).")
parser.add_argument("--auth_token", type=str, help="HuggingFace auth token.")
args = parser.parse_args()
convert_esm_checkpoint_to_pytorch(
args.model, args.pytorch_dump_folder_path, args.classification_head, args.push_to_repo, args.auth_token
)
| 18,458 | 45.032419 | 359 | py |
transformers | transformers-main/src/transformers/models/esm/modeling_esmfold.py | # coding=utf-8
# Copyright 2022 Meta and The HuggingFace Inc. team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
import math
import sys
from dataclasses import dataclass
from functools import partial
from typing import Callable, Dict, List, Optional, Sequence, Tuple, Union
import numpy as np
import torch
import torch.nn as nn
from torch.nn import LayerNorm
from ...deepspeed import is_deepspeed_available
from ...modeling_outputs import ModelOutput
from ...utils import (
ContextManagers,
add_start_docstrings,
add_start_docstrings_to_model_forward,
is_scipy_available,
logging,
replace_return_docstrings,
)
from .configuration_esm import EsmConfig
from .modeling_esm import ESM_START_DOCSTRING, EsmModel, EsmPreTrainedModel
from .openfold_utils import (
OFProtein,
Rigid,
Rotation,
atom14_to_atom37,
chunk_layer,
compute_predicted_aligned_error,
compute_tm,
frames_and_literature_positions_to_atom14_pos,
make_atom14_masks,
residue_constants,
to_pdb,
torsion_angles_to_frames,
)
logger = logging.get_logger(__name__)
_CHECKPOINT_FOR_DOC = "facebook/esmfold_v1"
_CONFIG_FOR_DOC = "EsmConfig"
@dataclass
class EsmForProteinFoldingOutput(ModelOutput):
"""
Output type of [`EsmForProteinFoldingOutput`].
Args:
frames (`torch.FloatTensor`):
Output frames.
sidechain_frames (`torch.FloatTensor`):
Output sidechain frames.
unnormalized_angles (`torch.FloatTensor`):
Predicted unnormalized backbone and side chain torsion angles.
angles (`torch.FloatTensor`):
Predicted backbone and side chain torsion angles.
positions (`torch.FloatTensor`):
Predicted positions of the backbone and side chain atoms.
states (`torch.FloatTensor`):
Hidden states from the protein folding trunk.
s_s (`torch.FloatTensor`):
Per-residue embeddings derived by concatenating the hidden states of each layer of the ESM-2 LM stem.
s_z (`torch.FloatTensor`):
Pairwise residue embeddings.
distogram_logits (`torch.FloatTensor`):
Input logits to the distogram used to compute residue distances.
lm_logits (`torch.FloatTensor`):
Logits output by the ESM-2 protein language model stem.
aatype (`torch.FloatTensor`):
Input amino acids (AlphaFold2 indices).
atom14_atom_exists (`torch.FloatTensor`):
Whether each atom exists in the atom14 representation.
residx_atom14_to_atom37 (`torch.FloatTensor`):
Mapping between atoms in the atom14 and atom37 representations.
residx_atom37_to_atom14 (`torch.FloatTensor`):
Mapping between atoms in the atom37 and atom14 representations.
atom37_atom_exists (`torch.FloatTensor`):
Whether each atom exists in the atom37 representation.
residue_index (`torch.FloatTensor`):
The index of each residue in the protein chain. Unless internal padding tokens are used, this will just be
a sequence of integers from 0 to `sequence_length`.
lddt_head (`torch.FloatTensor`):
Raw outputs from the lddt head used to compute plddt.
plddt (`torch.FloatTensor`):
Per-residue confidence scores. Regions of low confidence may indicate areas where the model's prediction is
uncertain, or where the protein structure is disordered.
ptm_logits (`torch.FloatTensor`):
Raw logits used for computing ptm.
ptm (`torch.FloatTensor`):
TM-score output representing the model's high-level confidence in the overall structure.
aligned_confidence_probs (`torch.FloatTensor`):
Per-residue confidence scores for the aligned structure.
predicted_aligned_error (`torch.FloatTensor`):
Predicted error between the model's prediction and the ground truth.
max_predicted_aligned_error (`torch.FloatTensor`):
Per-sample maximum predicted error.
"""
frames: torch.FloatTensor = None
sidechain_frames: torch.FloatTensor = None
unnormalized_angles: torch.FloatTensor = None
angles: torch.FloatTensor = None
positions: torch.FloatTensor = None
states: torch.FloatTensor = None
s_s: torch.FloatTensor = None
s_z: torch.FloatTensor = None
distogram_logits: torch.FloatTensor = None
lm_logits: torch.FloatTensor = None
aatype: torch.FloatTensor = None
atom14_atom_exists: torch.FloatTensor = None
residx_atom14_to_atom37: torch.FloatTensor = None
residx_atom37_to_atom14: torch.FloatTensor = None
atom37_atom_exists: torch.FloatTensor = None
residue_index: torch.FloatTensor = None
lddt_head: torch.FloatTensor = None
plddt: torch.FloatTensor = None
ptm_logits: torch.FloatTensor = None
ptm: torch.FloatTensor = None
aligned_confidence_probs: torch.FloatTensor = None
predicted_aligned_error: torch.FloatTensor = None
max_predicted_aligned_error: torch.FloatTensor = None
ESMFOLD_INPUTS_DOCSTRING = r"""
Args:
input_ids (`torch.LongTensor` of shape `({0})`):
Indices of input sequence tokens in the vocabulary.
Indices can be obtained using [`AutoTokenizer`]. See [`PreTrainedTokenizer.encode`] and
[`PreTrainedTokenizer.__call__`] for details.
[What are input IDs?](../glossary#input-ids)
attention_mask (`torch.FloatTensor` of shape `({0})`, *optional*):
Mask to avoid performing attention on padding token indices. Mask values selected in `[0, 1]`:
- 1 for tokens that are **not masked**,
- 0 for tokens that are **masked**.
[What are attention masks?](../glossary#attention-mask)
position_ids (`torch.LongTensor` of shape `({0})`, *optional*):
Indices of positions of each input sequence tokens in the position embeddings. Selected in the range `[0,
config.max_position_embeddings - 1]`.
[What are position IDs?](../glossary#position-ids)
masking_pattern (`torch.LongTensor` of shape `({0})`, *optional*):
Locations of tokens to mask during training as a form of regularization. Mask values selected in `[0, 1]`.
num_recycles (`int`, *optional*, defaults to `None`):
Number of times to recycle the input sequence. If `None`, defaults to `config.num_recycles`. "Recycling"
consists of passing the output of the folding trunk back in as input to the trunk. During training, the
number of recycles should vary with each batch, to ensure that the model learns to output valid predictions
after each recycle. During inference, num_recycles should be set to the highest value that the model was
trained with for maximum accuracy. Accordingly, when this value is set to `None`, config.max_recycles is
used.
"""
def is_fp16_enabled():
# Autocast world
fp16_enabled = torch.get_autocast_gpu_dtype() == torch.float16
fp16_enabled = fp16_enabled and torch.is_autocast_enabled()
return fp16_enabled
def is_deepspeed_initialized():
if is_deepspeed_available():
return False
else:
try:
import deepspeed
# This is not available in all DeepSpeed versions.
return deepspeed.utils.is_initialized()
except Exception:
return False
def collate_dense_tensors(samples: List[torch.Tensor], pad_v: float = 0) -> torch.Tensor:
"""
Takes a list of tensors with the following dimensions:
[(d_11, ..., d_1K),
(d_21, ..., d_2K), ..., (d_N1, ..., d_NK)]
and stack + pads them into a single tensor of:
(N, max_i=1,N { d_i1 }, ..., max_i=1,N {diK})
"""
if len(samples) == 0:
return torch.Tensor()
if len({x.dim() for x in samples}) != 1:
raise RuntimeError(f"Samples has varying dimensions: {[x.dim() for x in samples]}")
(device,) = tuple({x.device for x in samples}) # assumes all on same device
max_shape = [max(lst) for lst in zip(*[x.shape for x in samples])]
result = torch.empty(len(samples), *max_shape, dtype=samples[0].dtype, device=device)
result.fill_(pad_v)
for i in range(len(samples)):
result_i = result[i]
t = samples[i]
result_i[tuple(slice(0, k) for k in t.shape)] = t
return result
def flatten_final_dims(t: torch.Tensor, no_dims: int):
return t.reshape(t.shape[:-no_dims] + (-1,))
def permute_final_dims(tensor: torch.Tensor, inds: List[int]):
zero_index = -1 * len(inds)
first_inds = list(range(len(tensor.shape[:zero_index])))
return tensor.permute(first_inds + [zero_index + i for i in inds])
def dict_multimap(fn, dicts):
first = dicts[0]
new_dict = {}
for k, v in first.items():
all_v = [d[k] for d in dicts]
if type(v) is dict:
new_dict[k] = dict_multimap(fn, all_v)
else:
new_dict[k] = fn(all_v)
return new_dict
def trunc_normal_init_(weights, scale=1.0, fan="fan_in"):
shape = weights.shape
scale = scale / max(1, shape[1])
if not is_scipy_available():
logger.warning(
"This init requires scipy, but scipy was not found, default to an approximation that might not be"
" equivalent."
)
std = math.sqrt(scale)
torch.nn.init.normal_(weights, std=std).clamp(min=0.0, max=2.0 * std)
else:
from scipy.stats import truncnorm
std = math.sqrt(scale) / truncnorm.std(a=-2, b=2, loc=0, scale=1)
samples = truncnorm.rvs(a=-2, b=2, loc=0, scale=std, size=weights.numel())
samples = np.reshape(samples, shape)
weights.copy_(torch.tensor(samples, device=weights.device))
def ipa_point_weights_init_(weights):
with torch.no_grad():
softplus_inverse_1 = 0.541324854612918
weights.fill_(softplus_inverse_1)
class EsmFoldLinear(nn.Linear):
"""
A Linear layer with built-in nonstandard initializations. Called just like torch.nn.Linear.
Implements the initializers in 1.11.4, plus some additional ones found in the code.
"""
def __init__(
self,
in_dim: int,
out_dim: int,
bias: bool = True,
init: str = "default",
init_fn: Optional[Callable[[torch.Tensor, torch.Tensor], None]] = None,
):
"""
Args:
in_dim:
The final dimension of inputs to the layer
out_dim:
The final dimension of layer outputs
bias:
Whether to learn an additive bias. True by default
init:
The initializer to use. Choose from:
"default": LeCun fan-in truncated normal initialization "relu": He initialization w/ truncated normal
distribution "glorot": Fan-average Glorot uniform initialization "gating": Weights=0, Bias=1 "normal":
Normal initialization with std=1/sqrt(fan_in) "final": Weights=0, Bias=0
Overridden by init_fn if the latter is not None.
init_fn:
A custom initializer taking weight and bias as inputs. Overrides init if not None.
"""
super().__init__(in_dim, out_dim, bias=bias)
if bias:
with torch.no_grad():
self.bias.fill_(0)
self.init = init
self.init_fn = init_fn
if init not in ["default", "relu", "glorot", "gating", "normal", "final"]:
raise ValueError("Invalid init string.")
class EsmFoldLayerNorm(nn.Module):
def __init__(self, c_in, eps=1e-5):
super().__init__()
self.c_in = (c_in,)
self.eps = eps
self.weight = nn.Parameter(torch.ones(c_in))
self.bias = nn.Parameter(torch.zeros(c_in))
def forward(self, x):
d = x.dtype
if d is torch.bfloat16 and not is_deepspeed_initialized():
with torch.cuda.amp.autocast(enabled=False):
out = nn.functional.layer_norm(x, self.c_in, self.weight.to(dtype=d), self.bias.to(dtype=d), self.eps)
else:
out = nn.functional.layer_norm(x, self.c_in, self.weight, self.bias, self.eps)
return out
@torch.jit.ignore
def softmax_no_cast(t: torch.Tensor, dim: int = -1) -> torch.Tensor:
"""
Softmax, but without automatic casting to fp32 when the input is of type bfloat16
"""
d = t.dtype
if d is torch.bfloat16 and not is_deepspeed_initialized():
with torch.cuda.amp.autocast(enabled=False):
s = torch.nn.functional.softmax(t, dim=dim)
else:
s = torch.nn.functional.softmax(t, dim=dim)
return s
class EsmFoldAttention(nn.Module):
"""
Standard multi-head attention using AlphaFold's default layer initialization. Allows multiple bias vectors.
"""
def __init__(
self,
c_q: int,
c_k: int,
c_v: int,
c_hidden: int,
no_heads: int,
gating: bool = True,
):
"""
Args:
c_q:
Input dimension of query data
c_k:
Input dimension of key data
c_v:
Input dimension of value data
c_hidden:
Per-head hidden dimension
no_heads:
Number of attention heads
gating:
Whether the output should be gated using query data
"""
super().__init__()
self.c_q = c_q
self.c_k = c_k
self.c_v = c_v
self.c_hidden = c_hidden
self.no_heads = no_heads
self.gating = gating
# DISCREPANCY: c_hidden is not the per-head channel dimension, as
# stated in the supplement, but the overall channel dimension.
self.linear_q = EsmFoldLinear(self.c_q, self.c_hidden * self.no_heads, bias=False, init="glorot")
self.linear_k = EsmFoldLinear(self.c_k, self.c_hidden * self.no_heads, bias=False, init="glorot")
self.linear_v = EsmFoldLinear(self.c_v, self.c_hidden * self.no_heads, bias=False, init="glorot")
self.linear_o = EsmFoldLinear(self.c_hidden * self.no_heads, self.c_q, init="final")
self.linear_g = None
if self.gating:
self.linear_g = EsmFoldLinear(self.c_q, self.c_hidden * self.no_heads, init="gating")
self.sigmoid = nn.Sigmoid()
def _prep_qkv(self, q_x: torch.Tensor, kv_x: torch.Tensor) -> Tuple[torch.Tensor, torch.Tensor, torch.Tensor]:
# [*, Q/K/V, H * C_hidden]
q = self.linear_q(q_x)
k = self.linear_k(kv_x)
v = self.linear_v(kv_x)
# [*, Q/K, H, C_hidden]
q = q.view(q.shape[:-1] + (self.no_heads, -1))
k = k.view(k.shape[:-1] + (self.no_heads, -1))
v = v.view(v.shape[:-1] + (self.no_heads, -1))
# [*, H, Q/K, C_hidden]
q = q.transpose(-2, -3)
k = k.transpose(-2, -3)
v = v.transpose(-2, -3)
q /= math.sqrt(self.c_hidden)
return q, k, v
def _wrap_up(self, o: torch.Tensor, q_x: torch.Tensor) -> torch.Tensor:
if self.linear_g is not None:
g = self.sigmoid(self.linear_g(q_x))
# [*, Q, H, C_hidden]
g = g.view(g.shape[:-1] + (self.no_heads, -1))
o = o * g
# [*, Q, H * C_hidden]
o = flatten_final_dims(o, 2)
# [*, Q, C_q]
o = self.linear_o(o)
return o
def forward(
self,
q_x: torch.Tensor,
kv_x: torch.Tensor,
biases: Optional[List[torch.Tensor]] = None,
use_memory_efficient_kernel: bool = False,
use_lma: bool = False,
lma_q_chunk_size: int = 1024,
lma_kv_chunk_size: int = 4096,
use_flash: bool = False,
flash_mask: Optional[torch.Tensor] = None,
) -> torch.Tensor:
"""
Args:
q_x:
[*, Q, C_q] query data
kv_x:
[*, K, C_k] key data
biases:
List of biases that broadcast to [*, H, Q, K]
use_memory_efficient_kernel:
Whether to use a custom memory-efficient attention kernel. This should be the default choice for most.
If none of the "use_<...>" flags are True, a stock PyTorch implementation is used instead
use_lma:
Whether to use low-memory attention (Staats & Rabe 2021). If none of the "use_<...>" flags are True, a
stock PyTorch implementation is used instead
lma_q_chunk_size:
Query chunk size (for LMA)
lma_kv_chunk_size:
Key/Value chunk size (for LMA)
Returns
[*, Q, C_q] attention update
"""
if use_lma and (lma_q_chunk_size is None or lma_kv_chunk_size is None):
raise ValueError("If use_lma is specified, lma_q_chunk_size and lma_kv_chunk_size must be provided")
if use_flash and biases is not None:
raise ValueError("use_flash is incompatible with the bias option. For masking, use flash_mask instead")
attn_options = [use_memory_efficient_kernel, use_lma, use_flash]
if sum(attn_options) > 1:
raise ValueError("Choose at most one alternative attention algorithm")
if biases is None:
biases = []
# [*, H, Q/K, C_hidden]
query, key, value = self._prep_qkv(q_x, kv_x)
key = permute_final_dims(key, (1, 0))
# [*, H, Q, K]
output = torch.matmul(query, key)
for b in biases:
output += b
output = softmax_no_cast(output, -1)
# [*, H, Q, C_hidden]
output = torch.matmul(output, value)
output = output.transpose(-2, -3)
output = self._wrap_up(output, q_x)
return output
class EsmFoldTriangleAttention(nn.Module):
def __init__(self, c_in, c_hidden, no_heads, starting=True, inf=1e9):
"""
Args:
c_in:
Input channel dimension
c_hidden:
Overall hidden channel dimension (not per-head)
no_heads:
Number of attention heads
"""
super().__init__()
self.c_in = c_in
self.c_hidden = c_hidden
self.no_heads = no_heads
self.starting = starting
self.inf = inf
self.layer_norm = LayerNorm(self.c_in)
self.linear = EsmFoldLinear(c_in, self.no_heads, bias=False, init="normal")
self.mha = EsmFoldAttention(self.c_in, self.c_in, self.c_in, self.c_hidden, self.no_heads)
@torch.jit.ignore
def _chunk(
self,
x: torch.Tensor,
biases: List[torch.Tensor],
chunk_size: int,
use_memory_efficient_kernel: bool = False,
use_lma: bool = False,
inplace_safe: bool = False,
) -> torch.Tensor:
"triangle! triangle!"
mha_inputs = {
"q_x": x,
"kv_x": x,
"biases": biases,
}
return chunk_layer(
partial(self.mha, use_memory_efficient_kernel=use_memory_efficient_kernel, use_lma=use_lma),
mha_inputs,
chunk_size=chunk_size,
no_batch_dims=len(x.shape[:-2]),
_out=x if inplace_safe else None,
)
def forward(
self,
x: torch.Tensor,
mask: Optional[torch.Tensor] = None,
chunk_size: Optional[int] = None,
use_memory_efficient_kernel: bool = False,
use_lma: bool = False,
inplace_safe: bool = False,
) -> torch.Tensor:
"""
Args:
x:
[*, I, J, C_in] input tensor (e.g. the pair representation)
Returns:
[*, I, J, C_in] output tensor
"""
if mask is None:
# [*, I, J]
mask = x.new_ones(
x.shape[:-1],
)
if not self.starting:
x = x.transpose(-2, -3)
mask = mask.transpose(-1, -2)
# [*, I, J, C_in]
x = self.layer_norm(x)
# [*, I, 1, 1, J]
mask_bias = (self.inf * (mask - 1))[..., :, None, None, :]
# [*, H, I, J]
triangle_bias = permute_final_dims(self.linear(x), (2, 0, 1))
# [*, 1, H, I, J]
triangle_bias = triangle_bias.unsqueeze(-4)
biases = [mask_bias, triangle_bias]
if chunk_size is not None:
x = self._chunk(
x,
biases,
chunk_size,
use_memory_efficient_kernel=use_memory_efficient_kernel,
use_lma=use_lma,
inplace_safe=inplace_safe,
)
else:
x = self.mha(
q_x=x, kv_x=x, biases=biases, use_memory_efficient_kernel=use_memory_efficient_kernel, use_lma=use_lma
)
if not self.starting:
x = x.transpose(-2, -3)
return x
class EsmFoldTriangleMultiplicativeUpdate(nn.Module):
"""
Implements Algorithms 11 and 12.
"""
def __init__(self, config, _outgoing=True):
super().__init__()
c_hidden = config.pairwise_state_dim
self._outgoing = _outgoing
self.linear_a_p = EsmFoldLinear(c_hidden, c_hidden)
self.linear_a_g = EsmFoldLinear(c_hidden, c_hidden, init="gating")
self.linear_b_p = EsmFoldLinear(c_hidden, c_hidden)
self.linear_b_g = EsmFoldLinear(c_hidden, c_hidden, init="gating")
self.linear_g = EsmFoldLinear(c_hidden, c_hidden, init="gating")
self.linear_z = EsmFoldLinear(c_hidden, c_hidden, init="final")
self.layer_norm_in = LayerNorm(c_hidden)
self.layer_norm_out = LayerNorm(c_hidden)
self.sigmoid = nn.Sigmoid()
def _combine_projections(
self, a: torch.Tensor, b: torch.Tensor, _inplace_chunk_size: Optional[int] = None
) -> torch.Tensor:
if self._outgoing:
a = permute_final_dims(a, (2, 0, 1))
b = permute_final_dims(b, (2, 1, 0))
else:
a = permute_final_dims(a, (2, 1, 0))
b = permute_final_dims(b, (2, 0, 1))
if _inplace_chunk_size is not None:
# To be replaced by torch vmap
for i in range(0, a.shape[-3], _inplace_chunk_size):
a_chunk = a[..., i : i + _inplace_chunk_size, :, :]
b_chunk = b[..., i : i + _inplace_chunk_size, :, :]
a[..., i : i + _inplace_chunk_size, :, :] = torch.matmul(
a_chunk,
b_chunk,
)
p = a
else:
p = torch.matmul(a, b)
return permute_final_dims(p, (1, 2, 0))
def _inference_forward(
self,
z: torch.Tensor,
mask: Optional[torch.Tensor] = None,
inplace_chunk_size: Optional[int] = None,
with_add: bool = True,
):
"""
Args:
z:
A [*, N, N, C_z] pair representation
mask:
A [*, N, N] pair mask
inplace_chunk_size:
Size of chunks used in the main computation. Increase to trade memory for speed.
with_add:
If True, z is overwritten with (z + update). Otherwise, it is overwritten with (update).
Returns:
A reference to the overwritten z
More memory-efficient, inference-only version of the forward function. Uses in-place operations, fusion of the
addition that happens after this module in the Evoformer, a smidge of recomputation, and a cache of overwritten
values to lower peak memory consumption of this module from 5x the size of the input tensor z to 2.5x its size.
Useful for inference on extremely long sequences.
It works as follows. We will make reference to variables used in the default forward implementation below.
Naively, triangle multiplication attention requires the manifestation of 5 tensors the size of z: 1) z, the
"square" input tensor, 2) a, the first projection of z, 3) b, the second projection of b, 4) g, a z-sized mask,
and 5) a z-sized tensor for intermediate computations. For large N, this is prohibitively expensive; for
N=4000, for example, z is more than 8GB alone. To avoid this problem, we compute b, g, and all intermediate
tensors in small chunks, noting that the chunks required to compute a chunk of the output depend only on the
tensor a and corresponding vertical and horizontal chunks of z. This suggests an algorithm that loops over
pairs of chunks of z: hereafter "columns" and "rows" of z, even though each "column" and "row" in fact contains
inplace_chunk_size contiguous true columns and rows of z. Writing output chunks to a new tensor would bring
total memory consumption down to 3x the size of z. However, more memory can be saved by writing output chunks
directly to z in-place. WLOG, we choose to write output chunks vertically, overwriting the ith "column" of z at
the end of the ith iteration of the main loop. Despite this overwriting, the ith column is always one column
ahead of previously overwritten columns and can be recovered directly from z. After the first iteration,
however, the ith row of z is always at least partially overwritten. For this reason, we introduce the z-cache,
a tensor one-half the size of z. The z-cache initially contains the left half (2nd and 3rd quadrants) of z. For
0 < i < N/2, the missing left part of the ith row of z is recovered from this cache at the beginning of the ith
iteration. Once i exceeds n/2, the cache is "reoriented" to encompass the 3rd and 4th quadrants of z instead.
Though the 3rd quadrant of the original z is entirely overwritten at this point, it can be recovered from the
z-cache itself. Thereafter, the ith row of z can be recovered in its entirety from the reoriented z-cache.
After the final iteration, z has been completely overwritten and contains the triangular multiplicative update.
If with_add is True, it instead contains the sum of z and the triangular multiplicative update. In either case,
peak memory consumption is just 2.5x the size of z, disregarding memory used for chunks and other small
variables.
"""
if mask is None:
mask = z.new_ones(z.shape[:-1])
mask = mask.unsqueeze(-1)
def compute_projection_helper(pair, mask, a=True):
if a:
linear_g = self.linear_a_g
linear_p = self.linear_a_p
else:
linear_g = self.linear_b_g
linear_p = self.linear_b_p
pair = self.layer_norm_in(pair)
p = linear_g(pair)
p.sigmoid_()
p *= linear_p(pair)
p *= mask
p = permute_final_dims(p, (2, 0, 1))
return p
def compute_projection(pair, mask, a=True, chunked=True):
need_transpose = self._outgoing ^ a
if not chunked:
p = compute_projection_helper(pair, mask, a)
if need_transpose:
p = p.transpose(-1, -2)
else:
# This computation is chunked so as not to exceed our 2.5x
# budget with a large intermediate tensor
linear_g = self.linear_a_g if a else self.linear_b_g
c = linear_g.bias.shape[-1]
out_shape = pair.shape[:-3] + (c,) + pair.shape[-3:-1]
p = pair.new_zeros(out_shape)
for i in range(0, pair.shape[-3], inplace_chunk_size):
pair_chunk = pair[..., i : i + inplace_chunk_size, :, :]
pair_chunk = compute_projection_helper(
pair[..., i : i + inplace_chunk_size, :, :],
mask[..., i : i + inplace_chunk_size, :, :],
a,
)
if need_transpose:
pair_chunk = pair_chunk.transpose(-1, -2)
p[..., i : i + inplace_chunk_size] = pair_chunk
else:
p[..., i : i + inplace_chunk_size, :] = pair_chunk
del pair_chunk
return p
# We start by fully manifesting a. In addition to the input, this
# brings total memory consumption to 2x z (disregarding size of chunks)
# [*, N, N, c]
a = compute_projection(z, mask, True, chunked=True)
if inplace_chunk_size is not None:
n = a.shape[-1]
half_n = n // 2 + n % 2
row_dim = -3
col_dim = -2
b_chunk_dim = row_dim if self._outgoing else col_dim
def empty_slicer(t):
return [slice(None) for _ in t.shape]
def slice_tensor(t, start, end, dim):
# Slices start:end from the dim dimension of t
s = empty_slicer(t)
s[dim] = slice(start, end)
return t[s]
def flip_z_cache_(z_cache, z):
# "Reorient" the z_cache (see below), filling it with quadrants
# 3---recovered from the z_cache---and 4---recovered from z---
# of the input tensor z.
quadrant_3 = slice_tensor(z_cache, half_n, None, row_dim)
z_cache = z_cache.transpose(row_dim, col_dim)
# If n is odd, we need to shrink the z_cache by one row
z_cache = z_cache[..., : (n // 2), :, :]
# Move the 3rd quadrant of z into the
first_half_slicer = empty_slicer(z_cache)
first_half_slicer[col_dim] = slice(0, half_n)
z_cache[first_half_slicer] = quadrant_3
# Get the fourth quadrant of z
quadrant_4 = slice_tensor(z, half_n, None, row_dim)
quadrant_4 = slice_tensor(quadrant_4, half_n, None, col_dim)
# Insert said quadrant into the rotated z-cache
quadrant_3_slicer = empty_slicer(z_cache)
quadrant_3_slicer[col_dim] = slice(half_n, None)
z_cache[quadrant_3_slicer] = quadrant_4
return z_cache
# Initialize the z cache to the left half of z.
z_cache_shape = list(z.shape)
z_cache_shape[col_dim] = half_n
z_cache = z.new_zeros(z_cache_shape)
z_cache_slicer = empty_slicer(z_cache)
z_cache_slicer[col_dim] = slice(0, half_n)
z_cache.copy_(z[z_cache_slicer])
z_cache_rotated = False
# We need to reorient the z-cache at the halfway point, and we
# don't want a single chunk to straddle that point. We contract one
# of the chunks in the middle to address that problem.
i_range = list(range(0, half_n, inplace_chunk_size))
initial_offsets = [i_2 - i_1 for i_1, i_2 in zip(i_range, i_range[1:] + [half_n])]
after_half = list(range(half_n, n, inplace_chunk_size))
after_half_offsets = [inplace_chunk_size for _ in after_half]
combined_range_with_offsets = zip(i_range + after_half, initial_offsets + after_half_offsets)
for i, offset in combined_range_with_offsets:
if not z_cache_rotated and i >= half_n:
z_cache = flip_z_cache_(z_cache, z)
z_cache_rotated = True
z_chunk_b = slice_tensor(z, i, i + offset, b_chunk_dim)
mask_chunk = slice_tensor(mask, i, i + offset, b_chunk_dim)
z_chunk_b = z_chunk_b.clone()
if b_chunk_dim == col_dim:
z_chunk_b = slice_tensor(z, i, i + offset, col_dim)
else: # b_chunk_dim == row_dim
# In this case, the b-dimension (b_chunk_dim) is partially
# overwritten at the end of each iteration. We need to
# restore the missing component from the z-cache.
if not z_cache_rotated:
z_chunk_slicer = empty_slicer(z_chunk_b)
z_chunk_slicer[col_dim] = slice(0, half_n)
z_chunk_b[z_chunk_slicer] = slice_tensor(z_cache, i, i + offset, row_dim)
else:
z_cache_offset = i - half_n
z_chunk_b = slice_tensor(z_cache, z_cache_offset, z_cache_offset + offset, row_dim)
b_chunk = compute_projection(z_chunk_b, mask_chunk, a=False, chunked=False)
del z_chunk_b
x_chunk = torch.matmul(a, b_chunk)
x_chunk = permute_final_dims(x_chunk, (1, 2, 0))
x_chunk = self.layer_norm_out(x_chunk)
x_chunk = self.linear_z(x_chunk)
# The g dimension (col_dim) is parallel to and ahead of the
# overwrites in z. We can extract the g chunk normally.
z_chunk_g = slice_tensor(z, i, i + offset, col_dim)
g_chunk = self.linear_g(self.layer_norm_in(z_chunk_g))
g_chunk.sigmoid_()
del z_chunk_g
x_chunk *= g_chunk
# Write the columns into z in-place
z_slicer = empty_slicer(z)
z_slicer[col_dim] = slice(i, i + offset)
if with_add:
z[z_slicer] += x_chunk
else:
z[z_slicer] = x_chunk
else:
b = compute_projection(z, mask, False, False)
x = torch.matmul(a, b)
x = self.layer_norm_out(x)
x = self.linear_z(x)
g = self.linear_g(z)
g.sigmoid_()
x *= g
if with_add:
z += x
else:
z = x
return z
def forward(
self,
z: torch.Tensor,
mask: Optional[torch.Tensor] = None,
inplace_safe: bool = False,
_add_with_inplace: bool = False,
_inplace_chunk_size: Optional[int] = 256,
) -> torch.Tensor:
"""
Args:
x:
[*, N_res, N_res, C_z] input tensor
mask:
[*, N_res, N_res] input mask
Returns:
[*, N_res, N_res, C_z] output tensor
"""
if inplace_safe:
x = self._inference_forward(
z,
mask,
inplace_chunk_size=_inplace_chunk_size,
with_add=_add_with_inplace,
)
return x
if mask is None:
mask = z.new_ones(z.shape[:-1])
mask = mask.unsqueeze(-1)
z = self.layer_norm_in(z)
a = mask
a = a * self.sigmoid(self.linear_a_g(z))
a = a * self.linear_a_p(z)
b = mask
b = b * self.sigmoid(self.linear_b_g(z))
b = b * self.linear_b_p(z)
if is_fp16_enabled():
with torch.cuda.amp.autocast(enabled=False):
x = self._combine_projections(a.float(), b.float())
else:
x = self._combine_projections(a, b)
del a, b
x = self.layer_norm_out(x)
x = self.linear_z(x)
g = self.sigmoid(self.linear_g(z))
x = x * g
return x
class EsmFoldPreTrainedModel(EsmPreTrainedModel):
"""
An abstract class to handle weights initialization and a simple interface for downloading and loading pretrained
models.
"""
# Subclass `EsMPreTrainedModel` to deal with special init
def _init_weights(self, module):
"""Initialize the weights"""
if isinstance(module, EsmFoldLinear):
with torch.no_grad():
if module.init_fn is not None:
module.init_fn(module.weight, module.bias)
elif module.init == "default":
trunc_normal_init_(module.weight, scale=1.0)
elif module.init == "relu":
trunc_normal_init_(module.weight, scale=2.0)
elif module.init == "glorot":
nn.init.xavier_uniform_(module.weight, gain=1)
elif module.init == "gating":
module.weight.fill_(0.0)
if module.bias:
module.bias.fill_(1.0)
elif module.init == "normal":
torch.nn.init.kaiming_normal_(module.weight, nonlinearity="linear")
elif module.init == "final":
module.weight.fill_(0.0)
elif isinstance(module, EsmFoldInvariantPointAttention):
ipa_point_weights_init_(module.head_weights)
elif isinstance(module, EsmFoldTriangularSelfAttentionBlock):
torch.nn.init.zeros_(module.tri_mul_in.linear_z.weight)
torch.nn.init.zeros_(module.tri_mul_in.linear_z.bias)
torch.nn.init.zeros_(module.tri_mul_out.linear_z.weight)
torch.nn.init.zeros_(module.tri_mul_out.linear_z.bias)
torch.nn.init.zeros_(module.tri_att_start.mha.linear_o.weight)
torch.nn.init.zeros_(module.tri_att_start.mha.linear_o.bias)
torch.nn.init.zeros_(module.tri_att_end.mha.linear_o.weight)
torch.nn.init.zeros_(module.tri_att_end.mha.linear_o.bias)
torch.nn.init.zeros_(module.sequence_to_pair.o_proj.weight)
torch.nn.init.zeros_(module.sequence_to_pair.o_proj.bias)
torch.nn.init.zeros_(module.pair_to_sequence.linear.weight)
torch.nn.init.zeros_(module.seq_attention.o_proj.weight)
torch.nn.init.zeros_(module.seq_attention.o_proj.bias)
torch.nn.init.zeros_(module.mlp_seq.mlp[-2].weight)
torch.nn.init.zeros_(module.mlp_seq.mlp[-2].bias)
torch.nn.init.zeros_(module.mlp_pair.mlp[-2].weight)
torch.nn.init.zeros_(module.mlp_pair.mlp[-2].bias)
else:
super()._init_weights(module)
class EsmFoldSelfAttention(nn.Module):
def __init__(self, embed_dim, num_heads, head_width, gated=False):
super().__init__()
assert embed_dim == num_heads * head_width
self.embed_dim = embed_dim
self.num_heads = num_heads
self.head_width = head_width
self.proj = nn.Linear(embed_dim, embed_dim * 3, bias=False)
self.o_proj = nn.Linear(embed_dim, embed_dim, bias=True)
self.gated = gated
if gated:
self.g_proj = nn.Linear(embed_dim, embed_dim)
torch.nn.init.zeros_(self.g_proj.weight)
torch.nn.init.ones_(self.g_proj.bias)
self.rescale_factor = self.head_width**-0.5
torch.nn.init.zeros_(self.o_proj.bias)
def forward(self, x, mask=None, bias=None, indices=None):
"""
Basic self attention with optional mask and external pairwise bias. To handle sequences of different lengths,
use mask.
Inputs:
x: batch of input sequneces (.. x L x C) mask: batch of boolean masks where 1=valid, 0=padding position (..
x L_k) bias: batch of scalar pairwise attention biases (.. x Lq x Lk x num_heads)
Outputs:
sequence projection (B x L x embed_dim), attention maps (B x L x L x num_heads)
"""
t = self.proj(x).view(*x.shape[:2], self.num_heads, -1)
t = t.permute(0, 2, 1, 3)
q, k, v = t.chunk(3, dim=-1)
q = self.rescale_factor * q
a = torch.einsum("...qc,...kc->...qk", q, k)
# Add external attention bias.
if bias is not None:
a = a + bias.permute(0, 3, 1, 2)
# Do not attend to padding tokens.
if mask is not None:
mask = mask[:, None, None]
a = a.masked_fill(mask == False, -np.inf) # noqa: E712
a = nn.functional.softmax(a, dim=-1)
y = torch.einsum("...hqk,...hkc->...qhc", a, v)
y = y.reshape(*y.shape[:2], -1)
if self.gated:
y = self.g_proj(x).sigmoid() * y
y = self.o_proj(y)
return y, a.permute(0, 3, 1, 2)
class EsmFoldDropout(nn.Module):
"""
Implementation of dropout with the ability to share the dropout mask along a particular dimension.
"""
def __init__(self, r: float, batch_dim: Union[int, List[int]]):
super().__init__()
self.r = r
if type(batch_dim) == int:
batch_dim = [batch_dim]
self.batch_dim = batch_dim
self.dropout = nn.Dropout(self.r)
def forward(self, x: torch.Tensor) -> torch.Tensor:
shape = list(x.shape)
if self.batch_dim is not None:
for bd in self.batch_dim:
shape[bd] = 1
return x * self.dropout(x.new_ones(shape))
class EsmFoldSequenceToPair(nn.Module):
def __init__(self, sequence_state_dim, inner_dim, pairwise_state_dim):
super().__init__()
self.layernorm = nn.LayerNorm(sequence_state_dim)
self.proj = nn.Linear(sequence_state_dim, inner_dim * 2, bias=True)
self.o_proj = nn.Linear(2 * inner_dim, pairwise_state_dim, bias=True)
torch.nn.init.zeros_(self.proj.bias)
torch.nn.init.zeros_(self.o_proj.bias)
def forward(self, sequence_state):
"""
Inputs:
sequence_state: B x L x sequence_state_dim
Output:
pairwise_state: B x L x L x pairwise_state_dim
Intermediate state:
B x L x L x 2*inner_dim
"""
assert len(sequence_state.shape) == 3
s = self.layernorm(sequence_state)
s = self.proj(s)
q, k = s.chunk(2, dim=-1)
prod = q[:, None, :, :] * k[:, :, None, :]
diff = q[:, None, :, :] - k[:, :, None, :]
x = torch.cat([prod, diff], dim=-1)
x = self.o_proj(x)
return x
class EsmFoldPairToSequence(nn.Module):
def __init__(self, pairwise_state_dim, num_heads):
super().__init__()
self.layernorm = nn.LayerNorm(pairwise_state_dim)
self.linear = nn.Linear(pairwise_state_dim, num_heads, bias=False)
def forward(self, pairwise_state):
"""
Inputs:
pairwise_state: B x L x L x pairwise_state_dim
Output:
pairwise_bias: B x L x L x num_heads
"""
assert len(pairwise_state.shape) == 4
z = self.layernorm(pairwise_state)
pairwise_bias = self.linear(z)
return pairwise_bias
class EsmFoldResidueMLP(nn.Module):
def __init__(self, embed_dim, inner_dim, dropout=0):
super().__init__()
self.mlp = nn.Sequential(
nn.LayerNorm(embed_dim),
nn.Linear(embed_dim, inner_dim),
nn.ReLU(),
nn.Linear(inner_dim, embed_dim),
nn.Dropout(dropout),
)
def forward(self, x):
return x + self.mlp(x)
class EsmFoldTriangularSelfAttentionBlock(nn.Module):
def __init__(self, config):
super().__init__()
self.config = config
sequence_state_dim = config.sequence_state_dim
pairwise_state_dim = config.pairwise_state_dim
sequence_num_heads = sequence_state_dim // config.sequence_head_width
pairwise_num_heads = pairwise_state_dim // config.pairwise_head_width
self.layernorm_1 = nn.LayerNorm(sequence_state_dim)
self.sequence_to_pair = EsmFoldSequenceToPair(sequence_state_dim, pairwise_state_dim // 2, pairwise_state_dim)
self.pair_to_sequence = EsmFoldPairToSequence(pairwise_state_dim, sequence_num_heads)
self.seq_attention = EsmFoldSelfAttention(
sequence_state_dim, sequence_num_heads, config.sequence_head_width, gated=True
)
self.tri_mul_out = EsmFoldTriangleMultiplicativeUpdate(config, _outgoing=True)
self.tri_mul_in = EsmFoldTriangleMultiplicativeUpdate(config, _outgoing=False)
self.tri_att_start = EsmFoldTriangleAttention(
pairwise_state_dim, config.pairwise_head_width, pairwise_num_heads, inf=1e9, starting=True
)
self.tri_att_end = EsmFoldTriangleAttention(
pairwise_state_dim, config.pairwise_head_width, pairwise_num_heads, inf=1e9, starting=False
)
self.mlp_seq = EsmFoldResidueMLP(sequence_state_dim, 4 * sequence_state_dim, dropout=config.dropout)
self.mlp_pair = EsmFoldResidueMLP(pairwise_state_dim, 4 * pairwise_state_dim, dropout=config.dropout)
self.drop = nn.Dropout(config.dropout)
self.row_drop = EsmFoldDropout(config.dropout * 2, 2)
self.col_drop = EsmFoldDropout(config.dropout * 2, 1)
def forward(self, sequence_state, pairwise_state, mask=None, chunk_size=None, **__kwargs):
"""
Inputs:
sequence_state: B x L x sequence_state_dim pairwise_state: B x L x L x pairwise_state_dim mask: B x L boolean
tensor of valid positions
Output:
sequence_state: B x L x sequence_state_dim pairwise_state: B x L x L x pairwise_state_dim
"""
if len(sequence_state.shape) != 3:
raise ValueError(f"`sequence_state` should be a 3d-tensor, got {len(sequence_state.shape)} dims.")
if len(pairwise_state.shape) != 4:
raise ValueError(f"`pairwise_state` should be a 4d-tensor, got {len(pairwise_state.shape)} dims.")
if mask is not None and len(mask.shape) != 2:
raise ValueError(f"`mask` should be a 2d-tensor, got {len(mask.shape)} dims.")
batch_dim, seq_dim, sequence_state_dim = sequence_state.shape
pairwise_state_dim = pairwise_state.shape[3]
if sequence_state_dim != self.config.sequence_state_dim:
raise ValueError(
"`sequence_state` last dimension should be equal to `self.sequence_state_dim`. Got"
f"{sequence_state_dim} != {self.config.sequence_state_dim}."
)
if pairwise_state_dim != self.config.pairwise_state_dim:
raise ValueError(
"`pairwise_state` last dimension should be equal to `self.pairwise_state_dim`. Got "
f"{pairwise_state_dim} != {self.config.pairwise_state_dim}."
)
if batch_dim != pairwise_state.shape[0]:
raise ValueError(
f"`sequence_state` and `pairwise_state` have inconsistent batch size: {batch_dim} != "
f"{pairwise_state.shape[0]}."
)
if seq_dim != pairwise_state.shape[1] or seq_dim != pairwise_state.shape[2]:
raise ValueError(
f"`sequence_state` and `pairwise_state` have inconsistent sequence length: {seq_dim} != "
f"{pairwise_state.shape[1]} or {pairwise_state.shape[2]}."
)
# Update sequence state
bias = self.pair_to_sequence(pairwise_state)
# Self attention with bias + mlp.
y = self.layernorm_1(sequence_state)
y, _ = self.seq_attention(y, mask=mask, bias=bias)
sequence_state = sequence_state + self.drop(y)
sequence_state = self.mlp_seq(sequence_state)
# Update pairwise state
pairwise_state = pairwise_state + self.sequence_to_pair(sequence_state)
# Axial attention with triangular bias.
tri_mask = mask.unsqueeze(2) * mask.unsqueeze(1) if mask is not None else None
pairwise_state = pairwise_state + self.row_drop(self.tri_mul_out(pairwise_state, mask=tri_mask))
pairwise_state = pairwise_state + self.col_drop(self.tri_mul_in(pairwise_state, mask=tri_mask))
pairwise_state = pairwise_state + self.row_drop(
self.tri_att_start(pairwise_state, mask=tri_mask, chunk_size=chunk_size)
)
pairwise_state = pairwise_state + self.col_drop(
self.tri_att_end(pairwise_state, mask=tri_mask, chunk_size=chunk_size)
)
# MLP over pairs.
pairwise_state = self.mlp_pair(pairwise_state)
return sequence_state, pairwise_state
class EsmCategoricalMixture:
def __init__(self, param, bins=50, start=0, end=1):
# All tensors are of shape ..., bins.
self.logits = param
bins = torch.linspace(start, end, bins + 1, device=self.logits.device, dtype=self.logits.dtype)
self.v_bins = (bins[:-1] + bins[1:]) / 2
def log_prob(self, true):
# Shapes are:
# self.probs: ... x bins
# true : ...
true_index = (true.unsqueeze(-1) - self.v_bins[[None] * true.ndim]).abs().argmin(-1)
nll = self.logits.log_softmax(-1)
return torch.take_along_dim(nll, true_index.unsqueeze(-1), dim=-1).squeeze(-1)
def mean(self):
return (self.logits.softmax(-1) @ self.v_bins.unsqueeze(1)).squeeze(-1)
def categorical_lddt(logits, bins=50):
# Logits are ..., 37, bins.
return EsmCategoricalMixture(logits, bins=bins).mean()
def get_axial_mask(mask):
"""
Helper to convert B x L mask of valid positions to axial mask used in row column attentions.
Input:
mask: B x L tensor of booleans
Output:
mask: B x L x L tensor of booleans
"""
if mask is None:
return None
if len(mask.shape) != 2:
raise ValueError(f"`mask` should be a 2d-tensor, got {len(mask.shape)} dims.")
batch_dim, seq_dim = mask.shape
m = mask.unsqueeze(1).expand(batch_dim, seq_dim, seq_dim)
m = m.reshape(batch_dim * seq_dim, seq_dim)
return m
class EsmFoldRelativePosition(nn.Module):
def __init__(self, config):
super().__init__()
self.bins = config.position_bins
# Note an additional offset is used so that the 0th position
# is reserved for masked pairs.
self.embedding = torch.nn.Embedding(2 * self.bins + 2, config.pairwise_state_dim)
def forward(self, residue_index, mask=None):
"""
Input:
residue_index: B x L tensor of indices (dytpe=torch.long) mask: B x L tensor of booleans
Output:
pairwise_state: B x L x L x pairwise_state_dim tensor of embeddings
"""
if residue_index.dtype != torch.long:
raise ValueError(f"`residue_index` has dtype {residue_index.dtype}, it should be `torch.long`.")
if mask is not None and residue_index.shape != mask.shape:
raise ValueError(
f"`residue_index` and `mask` have inconsistent shapes: {residue_index.shape} != {mask.shape}."
)
diff = residue_index[:, None, :] - residue_index[:, :, None]
diff = diff.clamp(-self.bins, self.bins)
diff = diff + self.bins + 1 # Add 1 to adjust for padding index.
if mask is not None:
mask = mask[:, None, :] * mask[:, :, None]
diff[mask == False] = 0 # noqa: E712
output = self.embedding(diff)
return output
class EsmFoldAngleResnetBlock(nn.Module):
def __init__(self, config):
super().__init__()
self.linear_1 = EsmFoldLinear(config.resnet_dim, config.resnet_dim, init="relu")
self.linear_2 = EsmFoldLinear(config.resnet_dim, config.resnet_dim, init="final")
self.relu = nn.ReLU()
def forward(self, a: torch.Tensor) -> torch.Tensor:
s_initial = a
a = self.relu(a)
a = self.linear_1(a)
a = self.relu(a)
a = self.linear_2(a)
return a + s_initial
class EsmFoldAngleResnet(nn.Module):
"""
Implements Algorithm 20, lines 11-14
"""
def __init__(self, config):
super().__init__()
self.config = config
self.linear_in = EsmFoldLinear(config.sequence_dim, config.resnet_dim)
self.linear_initial = EsmFoldLinear(config.sequence_dim, config.resnet_dim)
self.layers = nn.ModuleList()
for _ in range(config.num_resnet_blocks):
layer = EsmFoldAngleResnetBlock(config)
self.layers.append(layer)
self.linear_out = EsmFoldLinear(config.resnet_dim, config.num_angles * 2)
self.relu = nn.ReLU()
def forward(self, s: torch.Tensor, s_initial: torch.Tensor) -> Tuple[torch.Tensor, torch.Tensor]:
"""
Args:
s:
[*, C_hidden] single embedding
s_initial:
[*, C_hidden] single embedding as of the start of the StructureModule
Returns:
[*, no_angles, 2] predicted angles
"""
# NOTE: The ReLU's applied to the inputs are absent from the supplement
# pseudocode but present in the source. For maximal compatibility with
# the pretrained weights, I'm going with the source.
# [*, C_hidden]
s_initial = self.relu(s_initial)
s_initial = self.linear_initial(s_initial)
s = self.relu(s)
s = self.linear_in(s)
s = s + s_initial
for l in self.layers:
s = l(s)
s = self.relu(s)
# [*, no_angles * 2]
s = self.linear_out(s)
# [*, no_angles, 2]
s = s.view(s.shape[:-1] + (-1, 2))
unnormalized_s = s
norm_denom = torch.sqrt(
torch.clamp(
torch.sum(s**2, dim=-1, keepdim=True),
min=self.config.epsilon,
)
)
s = s / norm_denom
return unnormalized_s, s
class EsmFoldInvariantPointAttention(nn.Module):
"""
Implements Algorithm 22.
"""
def __init__(self, config):
super().__init__()
self.config = config
c_s = config.sequence_dim
c_z = config.pairwise_dim
self.hidden_dim = config.ipa_dim
self.num_heads = config.num_heads_ipa
self.num_qk_points = config.num_qk_points
self.num_v_points = config.num_v_points
# These linear layers differ from their specifications in the
# supplement. There, they lack bias and use Glorot initialization.
# Here as in the official source, they have bias and use the default
# Lecun initialization.
hc = config.ipa_dim * config.num_heads_ipa
self.linear_q = EsmFoldLinear(c_s, hc)
self.linear_kv = EsmFoldLinear(c_s, 2 * hc)
hpq = config.num_heads_ipa * config.num_qk_points * 3
self.linear_q_points = EsmFoldLinear(c_s, hpq)
hpkv = config.num_heads_ipa * (config.num_qk_points + config.num_v_points) * 3
self.linear_kv_points = EsmFoldLinear(c_s, hpkv)
self.linear_b = EsmFoldLinear(c_z, config.num_heads_ipa)
self.head_weights = nn.Parameter(torch.zeros((config.num_heads_ipa)))
concat_out_dim = config.num_heads_ipa * (c_z + config.ipa_dim + config.num_v_points * 4)
self.linear_out = EsmFoldLinear(concat_out_dim, c_s, init="final")
self.softmax = nn.Softmax(dim=-1)
self.softplus = nn.Softplus()
def forward(
self,
s: torch.Tensor,
z: Optional[torch.Tensor],
r: Rigid,
mask: torch.Tensor,
_offload_inference: bool = False,
_z_reference_list: Optional[Sequence[torch.Tensor]] = None,
) -> torch.Tensor:
"""
Args:
s:
[*, N_res, C_s] single representation
z:
[*, N_res, N_res, C_z] pair representation
r:
[*, N_res] transformation object
mask:
[*, N_res] mask
Returns:
[*, N_res, C_s] single representation update
"""
z = [z]
#######################################
# Generate scalar and point activations
#######################################
# [*, N_res, H * C_hidden]
q = self.linear_q(s)
kv = self.linear_kv(s)
# [*, N_res, H, C_hidden]
q = q.view(q.shape[:-1] + (self.num_heads, -1))
# [*, N_res, H, 2 * C_hidden]
kv = kv.view(kv.shape[:-1] + (self.num_heads, -1))
# [*, N_res, H, C_hidden]
k, v = torch.split(kv, self.hidden_dim, dim=-1)
# [*, N_res, H * P_q * 3]
q_pts = self.linear_q_points(s)
# This is kind of clunky, but it's how the original does it
# [*, N_res, H * P_q, 3]
q_pts = torch.split(q_pts, q_pts.shape[-1] // 3, dim=-1)
q_pts = torch.stack(q_pts, dim=-1)
q_pts = r[..., None].apply(q_pts)
# [*, N_res, H, P_q, 3]
q_pts = q_pts.view(q_pts.shape[:-2] + (self.num_heads, self.num_qk_points, 3))
# [*, N_res, H * (P_q + P_v) * 3]
kv_pts = self.linear_kv_points(s)
# [*, N_res, H * (P_q + P_v), 3]
kv_pts = torch.split(kv_pts, kv_pts.shape[-1] // 3, dim=-1)
kv_pts = torch.stack(kv_pts, dim=-1)
kv_pts = r[..., None].apply(kv_pts)
# [*, N_res, H, (P_q + P_v), 3]
kv_pts = kv_pts.view(kv_pts.shape[:-2] + (self.num_heads, -1, 3))
# [*, N_res, H, P_q/P_v, 3]
k_pts, v_pts = torch.split(kv_pts, [self.num_qk_points, self.num_v_points], dim=-2)
##########################
# Compute attention scores
##########################
# [*, N_res, N_res, H]
b = self.linear_b(z[0])
if _offload_inference:
assert sys.getrefcount(z[0]) == 2
z[0] = z[0].cpu()
# [*, H, N_res, N_res]
if is_fp16_enabled():
with torch.cuda.amp.autocast(enabled=False):
a = torch.matmul(
permute_final_dims(q.float(), (1, 0, 2)), # [*, H, N_res, C_hidden]
permute_final_dims(k.float(), (1, 2, 0)), # [*, H, C_hidden, N_res]
)
else:
a = torch.matmul(
permute_final_dims(q, (1, 0, 2)), # [*, H, N_res, C_hidden]
permute_final_dims(k, (1, 2, 0)), # [*, H, C_hidden, N_res]
)
a *= math.sqrt(1.0 / (3 * self.hidden_dim))
a += math.sqrt(1.0 / 3) * permute_final_dims(b, (2, 0, 1))
# [*, N_res, N_res, H, P_q, 3]
pt_att = q_pts.unsqueeze(-4) - k_pts.unsqueeze(-5)
pt_att = pt_att**2
# [*, N_res, N_res, H, P_q]
pt_att = sum(torch.unbind(pt_att, dim=-1))
head_weights = self.softplus(self.head_weights).view(*((1,) * len(pt_att.shape[:-2]) + (-1, 1)))
head_weights = head_weights * math.sqrt(1.0 / (3 * (self.num_qk_points * 9.0 / 2)))
pt_att = pt_att * head_weights
# [*, N_res, N_res, H]
pt_att = torch.sum(pt_att, dim=-1) * (-0.5)
# [*, N_res, N_res]
square_mask = mask.unsqueeze(-1) * mask.unsqueeze(-2)
square_mask = self.config.inf * (square_mask - 1)
# [*, H, N_res, N_res]
pt_att = permute_final_dims(pt_att, (2, 0, 1))
a = a + pt_att
a = a + square_mask.unsqueeze(-3)
a = self.softmax(a)
################
# Compute output
################
# [*, N_res, H, C_hidden]
o = torch.matmul(a, v.transpose(-2, -3).to(dtype=a.dtype)).transpose(-2, -3)
# [*, N_res, H * C_hidden]
o = flatten_final_dims(o, 2)
# [*, H, 3, N_res, P_v]
o_pt = torch.sum(
(a[..., None, :, :, None] * permute_final_dims(v_pts, (1, 3, 0, 2))[..., None, :, :]),
dim=-2,
)
# [*, N_res, H, P_v, 3]
o_pt = permute_final_dims(o_pt, (2, 0, 3, 1))
o_pt = r[..., None, None].invert_apply(o_pt)
# [*, N_res, H * P_v]
o_pt_norm = flatten_final_dims(torch.sqrt(torch.sum(o_pt**2, dim=-1) + self.config.epsilon), 2)
# [*, N_res, H * P_v, 3]
o_pt = o_pt.reshape(*o_pt.shape[:-3], -1, 3)
if _offload_inference:
z[0] = z[0].to(o_pt.device)
# [*, N_res, H, C_z]
o_pair = torch.matmul(a.transpose(-2, -3), z[0].to(dtype=a.dtype))
# [*, N_res, H * C_z]
o_pair = flatten_final_dims(o_pair, 2)
# [*, N_res, C_s]
s = self.linear_out(
torch.cat((o, *torch.unbind(o_pt, dim=-1), o_pt_norm, o_pair), dim=-1).to(dtype=z[0].dtype)
)
return s
class EsmFoldBackboneUpdate(nn.Module):
"""
Implements part of Algorithm 23.
"""
def __init__(self, config):
super().__init__()
self.linear = EsmFoldLinear(config.sequence_dim, 6, init="final")
def forward(self, s: torch.Tensor) -> Tuple[torch.Tensor, torch.Tensor]:
"""
Args:
[*, N_res, C_s] single representation
Returns:
[*, N_res, 6] update vector
"""
# [*, 6]
update = self.linear(s)
return update
class EsmFoldStructureModuleTransitionLayer(nn.Module):
def __init__(self, config):
super().__init__()
self.linear_1 = EsmFoldLinear(config.sequence_dim, config.sequence_dim, init="relu")
self.linear_2 = EsmFoldLinear(config.sequence_dim, config.sequence_dim, init="relu")
self.linear_3 = EsmFoldLinear(config.sequence_dim, config.sequence_dim, init="final")
self.relu = nn.ReLU()
def forward(self, s):
s_initial = s
s = self.linear_1(s)
s = self.relu(s)
s = self.linear_2(s)
s = self.relu(s)
s = self.linear_3(s)
s = s + s_initial
return s
class EsmFoldStructureModuleTransition(nn.Module):
def __init__(self, config):
super().__init__()
self.config = config
self.layers = nn.ModuleList()
for _ in range(config.num_transition_layers):
l = EsmFoldStructureModuleTransitionLayer(config)
self.layers.append(l)
self.dropout = nn.Dropout(config.dropout_rate)
self.layer_norm = LayerNorm(config.sequence_dim)
def forward(self, s):
for l in self.layers:
s = l(s)
s = self.dropout(s)
s = self.layer_norm(s)
return s
class EsmFoldStructureModule(nn.Module):
def __init__(self, config):
super().__init__()
self.config = config
# Buffers to be lazily initialized later
# self.default_frames
# self.group_idx
# self.atom_mask
# self.lit_positions
self.layer_norm_s = LayerNorm(config.sequence_dim)
self.layer_norm_z = LayerNorm(config.pairwise_dim)
self.linear_in = EsmFoldLinear(config.sequence_dim, config.sequence_dim)
self.ipa = EsmFoldInvariantPointAttention(config)
self.ipa_dropout = nn.Dropout(config.dropout_rate)
self.layer_norm_ipa = LayerNorm(config.sequence_dim)
self.transition = EsmFoldStructureModuleTransition(config)
self.bb_update = EsmFoldBackboneUpdate(config)
self.angle_resnet = EsmFoldAngleResnet(config)
def forward(
self,
evoformer_output_dict,
aatype,
mask=None,
_offload_inference=False,
):
"""
Args:
evoformer_output_dict:
Dictionary containing:
"single":
[*, N_res, C_s] single representation
"pair":
[*, N_res, N_res, C_z] pair representation
aatype:
[*, N_res] amino acid indices
mask:
Optional [*, N_res] sequence mask
Returns:
A dictionary of outputs
"""
s = evoformer_output_dict["single"]
if mask is None:
# [*, N]
mask = s.new_ones(s.shape[:-1])
# [*, N, C_s]
s = self.layer_norm_s(s)
# [*, N, N, C_z]
z = self.layer_norm_z(evoformer_output_dict["pair"])
z_reference_list = None
if _offload_inference:
assert sys.getrefcount(evoformer_output_dict["pair"]) == 2
evoformer_output_dict["pair"] = evoformer_output_dict["pair"].cpu()
z_reference_list = [z]
z = None
# [*, N, C_s]
s_initial = s
s = self.linear_in(s)
# [*, N]
rigids = Rigid.identity(
s.shape[:-1],
s.dtype,
s.device,
self.training,
fmt="quat",
)
outputs = []
for i in range(self.config.num_blocks):
# [*, N, C_s]
s = s + self.ipa(
s,
z,
rigids,
mask,
_offload_inference=_offload_inference,
_z_reference_list=z_reference_list,
)
s = self.ipa_dropout(s)
s = self.layer_norm_ipa(s)
s = self.transition(s)
# [*, N]
rigids = rigids.compose_q_update_vec(self.bb_update(s))
# To hew as closely as possible to AlphaFold, we convert our
# quaternion-based transformations to rotation-matrix ones
# here
backb_to_global = Rigid(
Rotation(rot_mats=rigids.get_rots().get_rot_mats(), quats=None),
rigids.get_trans(),
)
backb_to_global = backb_to_global.scale_translation(self.config.trans_scale_factor)
# [*, N, 7, 2]
unnormalized_angles, angles = self.angle_resnet(s, s_initial)
all_frames_to_global = self.torsion_angles_to_frames(backb_to_global, angles, aatype)
pred_xyz = self.frames_and_literature_positions_to_atom14_pos(all_frames_to_global, aatype)
scaled_rigids = rigids.scale_translation(self.config.trans_scale_factor)
preds = {
"frames": scaled_rigids.to_tensor_7(),
"sidechain_frames": all_frames_to_global.to_tensor_4x4(),
"unnormalized_angles": unnormalized_angles,
"angles": angles,
"positions": pred_xyz,
"states": s,
}
outputs.append(preds)
rigids = rigids.stop_rot_gradient()
del z, z_reference_list
if _offload_inference:
evoformer_output_dict["pair"] = evoformer_output_dict["pair"].to(s.device)
outputs = dict_multimap(torch.stack, outputs)
outputs["single"] = s
return outputs
def _init_residue_constants(self, float_dtype, device):
if not hasattr(self, "default_frames"):
self.register_buffer(
"default_frames",
torch.tensor(
residue_constants.restype_rigid_group_default_frame,
dtype=float_dtype,
device=device,
requires_grad=False,
),
persistent=False,
)
if not hasattr(self, "group_idx"):
self.register_buffer(
"group_idx",
torch.tensor(
residue_constants.restype_atom14_to_rigid_group,
device=device,
requires_grad=False,
),
persistent=False,
)
if not hasattr(self, "atom_mask"):
self.register_buffer(
"atom_mask",
torch.tensor(
residue_constants.restype_atom14_mask,
dtype=float_dtype,
device=device,
requires_grad=False,
),
persistent=False,
)
if not hasattr(self, "lit_positions"):
self.register_buffer(
"lit_positions",
torch.tensor(
residue_constants.restype_atom14_rigid_group_positions,
dtype=float_dtype,
device=device,
requires_grad=False,
),
persistent=False,
)
def torsion_angles_to_frames(self, r, alpha, f):
# Lazily initialize the residue constants on the correct device
self._init_residue_constants(alpha.dtype, alpha.device)
# Separated purely to make testing less annoying
return torsion_angles_to_frames(r, alpha, f, self.default_frames)
def frames_and_literature_positions_to_atom14_pos(self, r, f): # [*, N, 8] # [*, N]
# Lazily initialize the residue constants on the correct device
self._init_residue_constants(r.get_rots().dtype, r.get_rots().device)
return frames_and_literature_positions_to_atom14_pos(
r,
f,
self.default_frames,
self.group_idx,
self.atom_mask,
self.lit_positions,
)
class EsmFoldingTrunk(nn.Module):
def __init__(self, config):
super().__init__()
self.config = config
c_s = config.sequence_state_dim
c_z = config.pairwise_state_dim
self.pairwise_positional_embedding = EsmFoldRelativePosition(config)
self.blocks = nn.ModuleList([EsmFoldTriangularSelfAttentionBlock(config) for _ in range(config.num_blocks)])
self.recycle_bins = 15
self.recycle_s_norm = nn.LayerNorm(c_s)
self.recycle_z_norm = nn.LayerNorm(c_z)
self.recycle_disto = nn.Embedding(self.recycle_bins, c_z)
self.recycle_disto.weight[0].detach().zero_()
self.structure_module = EsmFoldStructureModule(config.structure_module)
self.trunk2sm_s = nn.Linear(c_s, config.structure_module.sequence_dim)
self.trunk2sm_z = nn.Linear(c_z, config.structure_module.pairwise_dim)
self.chunk_size = config.chunk_size
def set_chunk_size(self, chunk_size):
# This parameter means the axial attention will be computed
# in a chunked manner. This should make the memory used more or less O(L) instead of O(L^2).
# It's equivalent to running a for loop over chunks of the dimension we're iterative over,
# where the chunk_size is the size of the chunks, so 128 would mean to parse 128-lengthed chunks.
self.chunk_size = chunk_size
def forward(self, seq_feats, pair_feats, true_aa, residx, mask, no_recycles):
"""
Inputs:
seq_feats: B x L x C tensor of sequence features pair_feats: B x L x L x C tensor of pair features residx: B
x L long tensor giving the position in the sequence mask: B x L boolean tensor indicating valid residues
Output:
predicted_structure: B x L x (num_atoms_per_residue * 3) tensor wrapped in a Coordinates object
"""
device = seq_feats.device
s_s_0 = seq_feats
s_z_0 = pair_feats
if no_recycles is None:
no_recycles = self.config.max_recycles
else:
if no_recycles < 0:
raise ValueError("Number of recycles must not be negative.")
no_recycles += 1 # First 'recycle' is just the standard forward pass through the model.
def trunk_iter(s, z, residx, mask):
z = z + self.pairwise_positional_embedding(residx, mask=mask)
for block in self.blocks:
s, z = block(s, z, mask=mask, residue_index=residx, chunk_size=self.chunk_size)
return s, z
s_s = s_s_0
s_z = s_z_0
recycle_s = torch.zeros_like(s_s)
recycle_z = torch.zeros_like(s_z)
recycle_bins = torch.zeros(*s_z.shape[:-1], device=device, dtype=torch.int64)
for recycle_idx in range(no_recycles):
with ContextManagers([] if recycle_idx == no_recycles - 1 else [torch.no_grad()]):
# === Recycling ===
recycle_s = self.recycle_s_norm(recycle_s.detach()).to(device)
recycle_z = self.recycle_z_norm(recycle_z.detach()).to(device)
recycle_z += self.recycle_disto(recycle_bins.detach()).to(device)
s_s, s_z = trunk_iter(s_s_0 + recycle_s, s_z_0 + recycle_z, residx, mask)
# === Structure module ===
structure = self.structure_module(
{"single": self.trunk2sm_s(s_s), "pair": self.trunk2sm_z(s_z)},
true_aa,
mask.float(),
)
recycle_s = s_s
recycle_z = s_z
# Distogram needs the N, CA, C coordinates, and bin constants same as alphafold.
recycle_bins = EsmFoldingTrunk.distogram(
structure["positions"][-1][:, :, :3],
3.375,
21.375,
self.recycle_bins,
)
structure["s_s"] = s_s
structure["s_z"] = s_z
return structure
@staticmethod
def distogram(coords, min_bin, max_bin, num_bins):
# Coords are [... L x 3 x 3], where it's [N, CA, C] x 3 coordinates.
boundaries = torch.linspace(
min_bin,
max_bin,
num_bins - 1,
device=coords.device,
)
boundaries = boundaries**2
N, CA, C = [x.squeeze(-2) for x in coords.chunk(3, dim=-2)]
# Infer CB coordinates.
b = CA - N
c = C - CA
a = b.cross(c, dim=-1)
CB = -0.58273431 * a + 0.56802827 * b - 0.54067466 * c + CA
dists = (CB[..., None, :, :] - CB[..., :, None, :]).pow(2).sum(dim=-1, keepdims=True)
bins = torch.sum(dists > boundaries, dim=-1) # [..., L, L]
return bins
# TODO Add information to the docstring about any methods that convert to PDB format, or otherwise prepare
# the outputs for downstream use.
@add_start_docstrings(
"""
ESMForProteinFolding is the HuggingFace port of the original ESMFold model. It consists of an ESM-2 "stem" followed
by a protein folding "head", although unlike most other output heads, this "head" is similar in size and runtime to
the rest of the model combined! It outputs a dictionary containing predicted structural information about the input
protein(s).
""",
ESM_START_DOCSTRING,
)
class EsmForProteinFolding(EsmPreTrainedModel):
def __init__(self, config):
super().__init__(config)
self.config = config
self.distogram_bins = 64
self.esm = EsmModel(config, add_pooling_layer=False)
self.esm.requires_grad_(False)
if self.config.esmfold_config.fp16_esm:
self.esm.half()
self.esm_feats = self.config.hidden_size
self.esm_attns = self.config.num_hidden_layers * self.config.num_attention_heads
self.esm_layers = self.config.num_hidden_layers
self.register_buffer("af2_to_esm", self._af2_to_esm_from_vocab_list(config.vocab_list))
self.esm_s_combine = nn.Parameter(torch.zeros(self.esm_layers + 1))
trunk_config = self.config.esmfold_config.trunk
c_s = trunk_config.sequence_state_dim
c_z = trunk_config.pairwise_state_dim
self.esm_s_mlp = nn.Sequential(
LayerNorm(self.esm_feats),
nn.Linear(self.esm_feats, c_s),
nn.ReLU(),
nn.Linear(c_s, c_s),
)
# 0 is padding, N is unknown residues, N + 1 is mask.
self.n_tokens_embed = residue_constants.restype_num + 3
self.pad_idx = 0
self.unk_idx = self.n_tokens_embed - 2
self.mask_idx = self.n_tokens_embed - 1
self.esm_dict_cls_idx = self.config.vocab_list.index("<cls>")
self.esm_dict_mask_idx = self.config.vocab_list.index("<mask>")
self.esm_dict_eos_idx = self.config.vocab_list.index("<eos>")
self.esm_dict_padding_idx = self.config.vocab_list.index("<pad>")
if self.config.esmfold_config.embed_aa:
self.embedding = nn.Embedding(self.n_tokens_embed, c_s, padding_idx=0)
self.trunk = EsmFoldingTrunk(trunk_config)
self.distogram_head = nn.Linear(c_z, self.distogram_bins)
self.ptm_head = nn.Linear(c_z, self.distogram_bins)
self.lm_head = nn.Linear(c_s, self.n_tokens_embed)
self.lddt_bins = 50
structure_module_config = trunk_config.structure_module
self.lddt_head = nn.Sequential(
nn.LayerNorm(structure_module_config.sequence_dim),
nn.Linear(structure_module_config.sequence_dim, self.config.esmfold_config.lddt_head_hid_dim),
nn.Linear(self.config.esmfold_config.lddt_head_hid_dim, self.config.esmfold_config.lddt_head_hid_dim),
nn.Linear(self.config.esmfold_config.lddt_head_hid_dim, 37 * self.lddt_bins),
)
@staticmethod
def _af2_to_esm_from_vocab_list(vocab_list: List[str]) -> torch.Tensor:
# Remember that t is shifted from residue_constants by 1 (0 is padding).
esm_reorder = [vocab_list.index("<pad>")] + [vocab_list.index(v) for v in residue_constants.restypes_with_x]
return torch.tensor(esm_reorder)
@add_start_docstrings_to_model_forward(ESMFOLD_INPUTS_DOCSTRING.format("batch_size, sequence_length"))
@replace_return_docstrings(output_type=EsmForProteinFoldingOutput, config_class=EsmConfig)
def forward(
self,
input_ids: torch.Tensor,
attention_mask: torch.Tensor = None,
position_ids: Optional[torch.Tensor] = None,
masking_pattern: Optional[torch.Tensor] = None,
num_recycles: Optional[int] = None,
):
r"""
Returns:
Example:
```python
>>> from transformers import AutoTokenizer, EsmForProteinFolding
>>> model = EsmForProteinFolding.from_pretrained("facebook/esmfold_v1")
>>> tokenizer = AutoTokenizer.from_pretrained("facebook/esmfold_v1")
>>> inputs = tokenizer(["MLKNVQVQLV"], return_tensors="pt", add_special_tokens=False) # A tiny random peptide
>>> outputs = model(**inputs)
>>> folded_positions = outputs.positions
```
"""
cfg = self.config.esmfold_config
aa = input_ids # B x L
B = aa.shape[0]
L = aa.shape[1]
device = input_ids.device
if attention_mask is None:
attention_mask = torch.ones_like(aa, device=device)
if position_ids is None:
position_ids = torch.arange(L, device=device).expand_as(input_ids)
# === ESM ===
esmaa = self.af2_idx_to_esm_idx(aa, attention_mask)
if masking_pattern is not None:
masked_aa, esmaa, mlm_targets = self.bert_mask(aa, esmaa, attention_mask, masking_pattern)
else:
masked_aa = aa
mlm_targets = None
# We get sequence and pair representations from whatever version of ESM /
# configuration we are using. The sequence representation esm_s is always
# present. The pair embedding esm_z may be present depending on the
# configuration of the model. If esm_z is not used by the model then it
# is returned as None here.
esm_s = self.compute_language_model_representations(esmaa)
# Convert esm_s and esm_z, if present, to the precision used by the trunk and
# the structure module. These tensors may be a lower precision if, for example,
# we're running the language model in fp16 precision.
esm_s = esm_s.to(self.esm_s_combine.dtype)
if cfg.esm_ablate_sequence:
esm_s = esm_s * 0
esm_s = esm_s.detach()
# === preprocessing ===
esm_s = (self.esm_s_combine.softmax(0).unsqueeze(0) @ esm_s).squeeze(2)
s_s_0 = self.esm_s_mlp(esm_s)
s_z_0 = s_s_0.new_zeros(B, L, L, cfg.trunk.pairwise_state_dim)
if self.config.esmfold_config.embed_aa:
s_s_0 += self.embedding(masked_aa)
structure: dict = self.trunk(s_s_0, s_z_0, aa, position_ids, attention_mask, no_recycles=num_recycles)
# Documenting what we expect:
structure = {
k: v
for k, v in structure.items()
if k
in [
"s_z",
"s_s",
"frames",
"sidechain_frames",
"unnormalized_angles",
"angles",
"positions",
"states",
]
}
# Add BERT mask for the loss to use, if available.
if mlm_targets:
structure["mlm_targets"] = mlm_targets
disto_logits = self.distogram_head(structure["s_z"])
disto_logits = (disto_logits + disto_logits.transpose(1, 2)) / 2
structure["distogram_logits"] = disto_logits
lm_logits = self.lm_head(structure["s_s"])
structure["lm_logits"] = lm_logits
structure["aatype"] = aa
make_atom14_masks(structure)
# Of course, this doesn't respect the true mask because it doesn't know about it...
# We're not going to properly mask change of index tensors:
# "residx_atom14_to_atom37",
# "residx_atom37_to_atom14",
for k in [
"atom14_atom_exists",
"atom37_atom_exists",
]:
structure[k] *= attention_mask.unsqueeze(-1)
structure["residue_index"] = position_ids
lddt_head = self.lddt_head(structure["states"]).reshape(structure["states"].shape[0], B, L, -1, self.lddt_bins)
structure["lddt_head"] = lddt_head
plddt = categorical_lddt(lddt_head[-1], bins=self.lddt_bins)
structure["plddt"] = plddt
ptm_logits = self.ptm_head(structure["s_z"])
structure["ptm_logits"] = ptm_logits
structure["ptm"] = compute_tm(ptm_logits, max_bin=31, no_bins=self.distogram_bins)
structure.update(compute_predicted_aligned_error(ptm_logits, max_bin=31, no_bins=self.distogram_bins))
return EsmForProteinFoldingOutput(**structure)
def af2_idx_to_esm_idx(self, aa, mask):
# avoid indexing on different devices
if self.af2_to_esm.device != aa.device:
self.af2_to_esm = self.af2_to_esm.to(aa.device)
aa = (aa + 1).masked_fill(mask != 1, 0)
return self.af2_to_esm[aa]
def compute_language_model_representations(self, esmaa: torch.Tensor) -> torch.Tensor:
device = next(self.parameters()).device
B, L = esmaa.shape # B = batch size, L = sequence length.
if self.config.esmfold_config.bypass_lm:
esm_s = torch.zeros(B, L, self.esm_s_combine.size[0], -1, self.esm_feats, device=device)
return esm_s
bosi, eosi = self.esm_dict_cls_idx, self.esm_dict_eos_idx
bos = esmaa.new_full((B, 1), bosi)
eos = esmaa.new_full((B, 1), self.esm_dict_padding_idx)
esmaa = torch.cat([bos, esmaa, eos], dim=1)
# Use the first padding index as eos during inference.
esmaa[range(B), (esmaa != 1).sum(1)] = eosi
# _, esm_z, esm_s = self.esm(esmaa, return_pairs=self.config.esmfold_config.use_esm_attn_map)
# Because we do not support use_esm_attn_map in the HF port as it is not used in any public models,
# esm_z is always None
esm_hidden_states = self.esm(esmaa, attention_mask=esmaa != 1, output_hidden_states=True)["hidden_states"]
esm_s = torch.stack(esm_hidden_states, dim=2)
esm_s = esm_s[:, 1:-1] # B, L, nLayers, C
return esm_s
def bert_mask(self, aa, esmaa, mask, pattern):
new_aa = aa.clone()
target = aa.clone()
new_esmaa = esmaa.clone()
new_aa[pattern == 1] = self.mask_idx
target[pattern != 1] = 0
new_esmaa[pattern == 1] = self.esm_dict_mask_idx
return new_aa, new_esmaa, target
@torch.no_grad()
def infer(
self,
seqs: Union[str, List[str]],
position_ids=None,
):
if type(seqs) is str:
lst = [seqs]
else:
lst = seqs
# Returns the raw outputs of the model given an input sequence.
device = next(self.parameters()).device
aatype = collate_dense_tensors(
[
torch.from_numpy(
residue_constants.sequence_to_onehot(
sequence=seq,
mapping=residue_constants.restype_order_with_x,
map_unknown_to_x=True,
)
)
.to(device)
.argmax(dim=1)
for seq in lst
]
) # B=1 x L
mask = collate_dense_tensors([aatype.new_ones(len(seq)) for seq in lst])
position_ids = (
torch.arange(aatype.shape[1], device=device).expand(len(lst), -1)
if position_ids is None
else position_ids.to(device)
)
if position_ids.ndim == 1:
position_ids = position_ids.unsqueeze(0)
return self.forward(
aatype,
mask,
position_ids=position_ids,
)
@staticmethod
def output_to_pdb(output: Dict) -> List[str]:
"""Returns the pbd (file) string from the model given the model output."""
output = {k: v.to("cpu").numpy() for k, v in output.items()}
pdbs = []
final_atom_positions = atom14_to_atom37(output["positions"][-1], output)
final_atom_mask = output["atom37_atom_exists"]
for i in range(output["aatype"].shape[0]):
aa = output["aatype"][i]
pred_pos = final_atom_positions[i]
mask = final_atom_mask[i]
resid = output["residue_index"][i] + 1
pred = OFProtein(
aatype=aa,
atom_positions=pred_pos,
atom_mask=mask,
residue_index=resid,
b_factors=output["plddt"][i],
)
pdbs.append(to_pdb(pred))
return pdbs
def infer_pdb(self, seqs, *args, **kwargs) -> str:
"""Returns the pdb (file) string from the model given an input sequence."""
assert type(seqs) is str
output = self.infer(seqs, *args, **kwargs)
return self.output_to_pdb(output)[0]
def infer_pdbs(self, seqs: List[str], *args, **kwargs) -> List[str]:
"""Returns the pdb (file) string from the model given an input sequence."""
output = self.infer(seqs, *args, **kwargs)
return self.output_to_pdb(output)
| 86,749 | 36.376131 | 119 | py |
transformers | transformers-main/src/transformers/models/esm/modeling_tf_esm.py | # coding=utf-8
# Copyright 2022 Meta and The HuggingFace Inc. team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
""" PyTorch ESM model."""
from __future__ import annotations
import os
from typing import Optional, Tuple, Union
import numpy as np
import tensorflow as tf
from tensorflow.keras.activations import gelu
from tensorflow.keras.layers import Dense, Dropout, Embedding, Layer, LayerNormalization
from ...file_utils import add_code_sample_docstrings, add_start_docstrings, add_start_docstrings_to_model_forward
from ...modeling_tf_outputs import (
TFBaseModelOutputWithPastAndCrossAttentions,
TFBaseModelOutputWithPoolingAndCrossAttentions,
TFMaskedLMOutput,
TFSequenceClassifierOutput,
TFTokenClassifierOutput,
)
from ...modeling_tf_utils import (
TFMaskedLanguageModelingLoss,
TFModelInputType,
TFPreTrainedModel,
TFSequenceClassificationLoss,
TFTokenClassificationLoss,
get_initializer,
shape_list,
unpack_inputs,
)
from ...tf_utils import check_embeddings_within_bounds, stable_softmax
from ...utils import logging
from .configuration_esm import EsmConfig
logger = logging.get_logger(__name__)
_CHECKPOINT_FOR_DOC = "facebook/esm2_t6_8M_UR50D"
_CONFIG_FOR_DOC = "EsmConfig"
TF_ESM_PRETRAINED_MODEL_ARCHIVE_LIST = [
"facebook/esm2_t6_8M_UR50D",
"facebook/esm2_t12_35M_UR50D",
# This is not a complete list of all ESM models!
# See all ESM models at https://huggingface.co/models?filter=esm
]
def rotate_half(x):
x1, x2 = tf.split(x, 2, axis=-1)
return tf.concat((-x2, x1), axis=-1)
def apply_rotary_pos_emb(x, cos, sin):
cos = cos[:, :, : tf.shape(x)[-2], :]
sin = sin[:, :, : tf.shape(x)[-2], :]
return (x * cos) + (rotate_half(x) * sin)
def symmetrize(x):
"Make layer symmetric in final two dimensions, used for contact prediction."
return x + tf.linalg.matrix_transpose(x) # Transposes last two dimensions only
def average_product_correct(x):
"Perform average product correct, used for contact prediction."
a1 = tf.reduce_sum(x, -1, keepdims=True)
a2 = tf.reduce_sum(x, -2, keepdims=True)
a12 = tf.reduce_sum(x, (-1, -2), keepdims=True)
avg = a1 * a2
avg = avg / a12
normalized = x - avg
return normalized
class TFRotaryEmbedding(Layer):
"""
Rotary position embeddings based on those in
[RoFormer](https://huggingface.co/docs/transformers/model_doc/roformer). Query and keys are transformed by rotation
matrices which depend on their relative positions.
"""
def __init__(self, dim: int, name=None):
super().__init__(name=name)
# Matt: The PyTorch version of this layer does a lot of work to cache values, but we just rely on TF compilation
# and/or XLA to sort out constants like that. It actually may not seem like this layer needs to be stateful at
# all when we benefit from TF compilation, but it does. The reason is that self.inv_freq is a buffer in the
# original implementation, but all the shared ESM checkpoints were trained with fp16 params. This means that
# the inv_freq tensor was stored as a float16, and we need to replicate those lower-precision values or our
# models give different outputs from the original.
self.dim = dim
def build(self, input_shape):
super().build(input_shape)
self.inv_freq = self.add_weight(
"inv_freq", shape=(self.dim // 2,), dtype=tf.float32, initializer=get_initializer(1.0), trainable=False
)
self.inv_freq.assign(
1.0 / (10000 ** (tf.range(start=0, limit=self.dim, delta=2, dtype=tf.float32) / self.dim))
)
def _compute_cos_sin(self, x, seq_dimension=2):
seq_len = tf.shape(x)[seq_dimension]
t = tf.range(seq_len, dtype=self.inv_freq.dtype)
freqs = tf.einsum("i, j -> ij", t, self.inv_freq) # Outer multiplication
emb = tf.concat((freqs, freqs), axis=-1)[None, None, :, :]
return tf.cos(emb), tf.sin(emb)
def call(self, q: tf.Tensor, k: tf.Tensor) -> Tuple[tf.Tensor, tf.Tensor]:
cos_emb, sin_emb = self._compute_cos_sin(k, seq_dimension=-2)
return (
apply_rotary_pos_emb(q, cos_emb, sin_emb),
apply_rotary_pos_emb(k, cos_emb, sin_emb),
)
class TFEsmContactPredictionHead(Layer):
"""Performs symmetrization, apc, and computes a logistic regression on the output features"""
def __init__(
self,
in_features: int,
bias=True,
eos_idx: int = 2,
name=None,
):
super().__init__(name=name)
self.eos_idx = eos_idx
self.in_features = in_features
self.regression = Dense(1, use_bias=bias, activation="sigmoid", name="regression")
def build(self, input_shape):
super().build(input_shape)
with tf.name_scope("regression"):
self.regression.build((None, self.in_features))
def call(self, tokens, attentions):
# remove eos token attentions
eos_mask = tf.cast(tokens != self.eos_idx, attentions.dtype)
eos_mask = tf.expand_dims(eos_mask, 1) * tf.expand_dims(eos_mask, 2)
attentions = attentions * eos_mask[:, None, None, :, :]
attentions = attentions[..., :-1, :-1]
# remove cls token attentions
attentions = attentions[..., 1:, 1:]
batch_size, layers, heads, seqlen, _ = shape_list(attentions)
attentions = tf.reshape(attentions, (batch_size, layers * heads, seqlen, seqlen))
# features: batch x channels x tokens x tokens (symmetric)
attentions = average_product_correct(symmetrize(attentions))
attentions = tf.transpose(attentions, perm=(0, 2, 3, 1))
return tf.squeeze(self.regression(attentions), 3)
class TFEsmEmbeddings(Layer):
"""
Same as BertEmbeddings with a tiny tweak for positional embeddings indexing.
"""
def __init__(self, config, name=None):
super().__init__(name=name)
self.word_embeddings = Embedding(
config.vocab_size,
config.hidden_size,
embeddings_initializer=get_initializer(config.initializer_range),
name="word_embeddings",
)
self.position_embeddings = Embedding(
config.max_position_embeddings,
config.hidden_size,
embeddings_initializer=get_initializer(config.initializer_range),
name="position_embeddings",
)
if config.emb_layer_norm_before:
self.layer_norm = LayerNormalization(epsilon=config.layer_norm_eps, name="layer_norm")
else:
self.layer_norm = None
# Matt: I think this line was copied incorrectly from BERT, disabling for now
# self.dropout = Dropout(config.hidden_dropout_prob)
self.position_embedding_type = getattr(config, "position_embedding_type", "absolute")
self.position_ids = tf.range(config.max_position_embeddings)[None, :]
self.padding_idx = config.pad_token_id
self.token_dropout = config.token_dropout
self.mask_token_id = config.mask_token_id
self.config = config
def call(
self, input_ids=None, attention_mask=None, position_ids=None, inputs_embeds=None, past_key_values_length=0
):
if position_ids is None:
if input_ids is not None:
# Create the position ids from the input token ids. Any padded tokens remain padded.
position_ids = create_position_ids_from_input_ids(input_ids, self.padding_idx, past_key_values_length)
else:
position_ids = self.create_position_ids_from_inputs_embeds(inputs_embeds)
if inputs_embeds is None:
check_embeddings_within_bounds(input_ids, self.config.vocab_size)
inputs_embeds = self.word_embeddings(input_ids)
# Note that if we want to support ESM-1 (not 1b!) in future then we need to support an
# embedding_scale factor here.
embeddings = inputs_embeds
# Matt: ESM has the option to handle masking in MLM in a slightly unusual way. If the token_dropout
# flag is False then it is handled in the same was as BERT/RoBERTa. If it is set to True, however,
# masked tokens are treated as if they were selected for input dropout and zeroed out.
# This "mask-dropout" is compensated for when masked tokens are not present, by scaling embeddings by
# a factor of (fraction of unmasked tokens during training) / (fraction of unmasked tokens in sample).
# This is analogous to the way that dropout layers scale down outputs during evaluation when not
# actually dropping out values (or, equivalently, scale up their un-dropped outputs in training).
if self.token_dropout:
embeddings = tf.where((input_ids == self.mask_token_id)[:, :, None], 0.0, embeddings)
mask_ratio_train = 0.15 * 0.8 # Hardcoded as the ratio used in all ESM model training runs
src_lengths = tf.cast(tf.reduce_sum(attention_mask, axis=-1), tf.float32)
masked_tokens = input_ids == self.mask_token_id
mask_ratio_observed = tf.math.count_nonzero(masked_tokens, dtype=tf.float32, axis=-1) / src_lengths
embeddings = embeddings * (1 - mask_ratio_train) / (1 - mask_ratio_observed)[:, None, None]
if self.position_embedding_type == "absolute":
position_embeddings = self.position_embeddings(position_ids)
embeddings += position_embeddings
if self.layer_norm is not None:
embeddings = self.layer_norm(embeddings)
if attention_mask is not None:
embeddings = embeddings * tf.cast(tf.expand_dims(attention_mask, -1), embeddings.dtype)
# Matt: I think this line was copied incorrectly from BERT, disabling it for now.
# embeddings = self.dropout(embeddings)
return embeddings
def create_position_ids_from_inputs_embeds(self, inputs_embeds):
"""
We are provided embeddings directly. We cannot infer which are padded so just generate sequential position ids.
Args:
inputs_embeds: tf.Tensor
Returns: tf.Tensor
"""
input_shape = shape_list(inputs_embeds)[:-1]
sequence_length = input_shape[1]
position_ids = tf.range(
start=self.padding_idx + 1, limit=sequence_length + self.padding_idx + 1, dtype=tf.int64
)
return tf.broadcast_to(tf.expand_dims(position_ids, 0), input_shape)
class TFEsmSelfAttention(Layer):
def __init__(self, config, position_embedding_type=None, name=None):
super().__init__(name=name)
if config.hidden_size % config.num_attention_heads != 0 and not hasattr(config, "embedding_size"):
raise ValueError(
f"The hidden size ({config.hidden_size}) is not a multiple of the number of attention "
f"heads ({config.num_attention_heads})"
)
self.num_attention_heads = config.num_attention_heads
self.attention_head_size = int(config.hidden_size / config.num_attention_heads)
self.all_head_size = self.num_attention_heads * self.attention_head_size
self.query = Dense(
self.all_head_size, kernel_initializer=get_initializer(config.initializer_range), name="query"
)
self.key = Dense(self.all_head_size, kernel_initializer=get_initializer(config.initializer_range), name="key")
self.value = Dense(
self.all_head_size, kernel_initializer=get_initializer(config.initializer_range), name="value"
)
self.dropout = Dropout(config.attention_probs_dropout_prob)
self.position_embedding_type = position_embedding_type or getattr(
config, "position_embedding_type", "absolute"
)
self.rotary_embeddings = None
if self.position_embedding_type == "relative_key" or self.position_embedding_type == "relative_key_query":
self.max_position_embeddings = config.max_position_embeddings
self.distance_embedding = Embedding(
2 * config.max_position_embeddings - 1,
self.attention_head_size,
embeddings_initializer=get_initializer(config.initializer_range),
)
elif self.position_embedding_type == "rotary":
self.rotary_embeddings = TFRotaryEmbedding(dim=self.attention_head_size, name="rotary_embeddings")
self.is_decoder = config.is_decoder
def transpose_for_scores(self, x: tf.Tensor) -> tf.Tensor:
new_x_shape = shape_list(x)[:-1] + [self.num_attention_heads, self.attention_head_size]
x = tf.reshape(x, new_x_shape)
return tf.transpose(x, perm=(0, 2, 1, 3))
def call(
self,
hidden_states: tf.Tensor,
attention_mask: tf.Tensor | None = None,
head_mask: tf.Tensor | None = None,
encoder_hidden_states: tf.Tensor | None = None,
encoder_attention_mask: tf.Tensor | None = None,
past_key_value: Tuple[Tuple[tf.Tensor]] | None = None,
output_attentions: Optional[bool] = False,
training: bool = False,
) -> Tuple[tf.Tensor]:
mixed_query_layer = self.query(hidden_states)
# If this is instantiated as a cross-attention module, the keys
# and values come from an encoder; the attention mask needs to be
# such that the encoder's padding tokens are not attended to.
is_cross_attention = encoder_hidden_states is not None
if is_cross_attention and past_key_value is not None:
# reuse k,v, cross_attentions
key_layer = past_key_value[0]
value_layer = past_key_value[1]
attention_mask = encoder_attention_mask
elif is_cross_attention:
key_layer = self.transpose_for_scores(self.key(encoder_hidden_states))
value_layer = self.transpose_for_scores(self.value(encoder_hidden_states))
attention_mask = encoder_attention_mask
elif past_key_value is not None:
key_layer = self.transpose_for_scores(self.key(hidden_states))
value_layer = self.transpose_for_scores(self.value(hidden_states))
key_layer = tf.concat([past_key_value[0], key_layer], axis=2)
value_layer = tf.concat([past_key_value[1], value_layer], axis=2)
else:
key_layer = self.transpose_for_scores(self.key(hidden_states))
value_layer = self.transpose_for_scores(self.value(hidden_states))
query_layer = self.transpose_for_scores(mixed_query_layer)
# Matt: Our BERT model (which this code was derived from) scales attention logits down by sqrt(head_dim).
# ESM scales the query down by the same factor instead. Modulo numerical stability these are equivalent,
# but not when rotary embeddings get involved. Therefore, we scale the query here to match the original
# ESM code and fix rotary embeddings.
query_layer = query_layer * self.attention_head_size**-0.5
if self.is_decoder:
# if cross_attention save Tuple(tf.Tensor, tf.Tensor) of all cross attention key/value_states.
# Further calls to cross_attention layer can then reuse all cross-attention
# key/value_states (first "if" case)
# if uni-directional self-attention (decoder) save Tuple(tf.Tensor, tf.Tensor) of
# all previous decoder key/value_states. Further calls to uni-directional self-attention
# can concat previous decoder key/value_states to current projected key/value_states (third "elif" case)
# if encoder bi-directional self-attention `past_key_value` is always `None`
past_key_value = (key_layer, value_layer)
if self.position_embedding_type == "rotary":
query_layer, key_layer = self.rotary_embeddings(query_layer, key_layer)
# Take the dot product between "query" and "key" to get the raw attention scores.
attention_scores = tf.matmul(query_layer, key_layer, transpose_b=True)
if self.position_embedding_type == "relative_key" or self.position_embedding_type == "relative_key_query":
seq_length = shape_list(hidden_states)[1]
position_ids_l = tf.expand_dims(tf.range(seq_length, dtype=tf.int64), -1)
position_ids_r = tf.expand_dims(tf.range(seq_length, dtype=tf.int64), 0)
distance = position_ids_l - position_ids_r
positional_embedding = self.distance_embedding(distance + self.max_position_embeddings - 1)
positional_embedding = tf.cast(positional_embedding, query_layer.dtype) # fp16 compatibility
if self.position_embedding_type == "relative_key":
relative_position_scores = tf.einsum("bhld,lrd->bhlr", query_layer, positional_embedding)
attention_scores = attention_scores + relative_position_scores
elif self.position_embedding_type == "relative_key_query":
relative_position_scores_query = tf.einsum("bhld,lrd->bhlr", query_layer, positional_embedding)
relative_position_scores_key = tf.einsum("bhrd,lrd->bhlr", key_layer, positional_embedding)
attention_scores = attention_scores + relative_position_scores_query + relative_position_scores_key
if attention_mask is not None:
# Apply the attention mask is (precomputed for all layers in EsmModel forward() function)
attention_scores = attention_scores + attention_mask
# Normalize the attention scores to probabilities.
attention_probs = stable_softmax(attention_scores, axis=-1)
# This is actually dropping out entire tokens to attend to, which might
# seem a bit unusual, but is taken from the original Transformer paper.
attention_probs = self.dropout(attention_probs, training=training)
# Mask heads if we want to
if head_mask is not None:
attention_probs = attention_probs * head_mask
context_layer = attention_probs @ value_layer
context_layer = tf.transpose(context_layer, perm=(0, 2, 1, 3))
new_context_layer_shape = shape_list(context_layer)[:-2] + [self.all_head_size]
context_layer = tf.reshape(context_layer, new_context_layer_shape)
outputs = (context_layer, attention_probs) if output_attentions else (context_layer,)
if self.is_decoder:
outputs = outputs + (past_key_value,)
return outputs
class TFEsmSelfOutput(Layer):
def __init__(self, config, name=None):
super().__init__(name=name)
self.dense = Dense(
config.hidden_size, kernel_initializer=get_initializer(config.initializer_range), name="dense"
)
self.dropout = Dropout(config.hidden_dropout_prob)
def call(self, hidden_states, input_tensor, training=False):
hidden_states = self.dense(hidden_states)
hidden_states = self.dropout(hidden_states, training=training)
hidden_states += input_tensor
return hidden_states
class TFEsmAttention(Layer):
def __init__(self, config, name=None):
super().__init__(name=name)
self.self = TFEsmSelfAttention(config, name="self")
self.output_layer = TFEsmSelfOutput(config, name="output")
self.pruned_heads = set()
self.LayerNorm = LayerNormalization(epsilon=config.layer_norm_eps, name="LayerNorm")
def prune_heads(self, heads):
raise NotImplementedError
def call(
self,
hidden_states,
attention_mask=None,
head_mask=None,
encoder_hidden_states=None,
encoder_attention_mask=None,
past_key_value=None,
output_attentions=False,
training=False,
):
hidden_states_ln = self.LayerNorm(hidden_states)
self_outputs = self.self(
hidden_states_ln,
attention_mask,
head_mask,
encoder_hidden_states,
encoder_attention_mask,
past_key_value,
output_attentions,
training,
)
attention_output = self.output_layer(self_outputs[0], hidden_states)
outputs = (attention_output,) + self_outputs[1:] # add attentions if we output them
return outputs
class TFEsmIntermediate(tf.keras.layers.Layer):
def __init__(self, config: EsmConfig, **kwargs):
super().__init__(**kwargs)
self.dense = tf.keras.layers.Dense(
units=config.intermediate_size,
kernel_initializer=get_initializer(config.initializer_range),
name="dense",
)
def call(self, hidden_states: tf.Tensor) -> tf.Tensor:
hidden_states = self.dense(inputs=hidden_states)
hidden_states = tf.nn.gelu(hidden_states)
return hidden_states
class TFEsmOutput(Layer):
def __init__(self, config, name=None):
super().__init__(name=name)
self.dense = Dense(
config.hidden_size, kernel_initializer=get_initializer(config.initializer_range), name="dense"
)
self.dropout = Dropout(config.hidden_dropout_prob)
def call(self, hidden_states, input_tensor, training=False):
hidden_states = self.dense(hidden_states)
hidden_states = self.dropout(hidden_states, training=training)
hidden_states += input_tensor
return hidden_states
class TFEsmLayer(Layer):
def __init__(self, config, name=None):
super().__init__(name=name)
self.chunk_size_feed_forward = config.chunk_size_feed_forward
self.seq_len_dim = 1
self.attention = TFEsmAttention(config, name="attention")
self.is_decoder = config.is_decoder
self.add_cross_attention = config.add_cross_attention
if self.add_cross_attention:
if not self.is_decoder:
raise RuntimeError(f"{self} should be used as a decoder model if cross attention is added")
self.crossattention = TFEsmAttention(config)
self.intermediate = TFEsmIntermediate(config, name="intermediate")
self.output_layer = TFEsmOutput(config, name="output")
self.LayerNorm = LayerNormalization(epsilon=config.layer_norm_eps, name="LayerNorm")
def call(
self,
hidden_states,
attention_mask=None,
head_mask=None,
encoder_hidden_states=None,
encoder_attention_mask=None,
past_key_value=None,
output_attentions=False,
training=False,
):
# decoder uni-directional self-attention cached key/values tuple is at positions 1,2
self_attn_past_key_value = past_key_value[:2] if past_key_value is not None else None
self_attention_outputs = self.attention(
hidden_states,
attention_mask,
head_mask,
output_attentions=output_attentions,
past_key_value=self_attn_past_key_value,
training=training,
)
attention_output = self_attention_outputs[0]
# if decoder, the last output is tuple of self-attn cache
if self.is_decoder:
outputs = self_attention_outputs[1:-1]
present_key_value = self_attention_outputs[-1]
else:
outputs = self_attention_outputs[1:] # add self attentions if we output attention weights
cross_attn_present_key_value = None
if self.is_decoder and encoder_hidden_states is not None:
if not hasattr(self, "crossattention"):
raise AttributeError(
f"If `encoder_hidden_states` are passed, {self} has to be instantiated"
" with cross-attention layers by setting `config.add_cross_attention=True`"
)
# cross_attn cached key/values tuple is at positions 3,4 of past_key_value tuple
cross_attn_past_key_value = past_key_value[-2:] if past_key_value is not None else None
cross_attention_outputs = self.crossattention(
attention_output,
attention_mask,
head_mask,
encoder_hidden_states,
encoder_attention_mask,
cross_attn_past_key_value,
output_attentions,
training=training,
)
attention_output = cross_attention_outputs[0]
outputs = outputs + cross_attention_outputs[1:-1] # add cross attentions if we output attention weights
# add cross-attn cache to positions 3,4 of present_key_value tuple
cross_attn_present_key_value = cross_attention_outputs[-1]
present_key_value = present_key_value + cross_attn_present_key_value
layernorm_output = self.LayerNorm(attention_output)
intermediate_output = self.intermediate(hidden_states=layernorm_output)
layer_output = self.output_layer(
hidden_states=intermediate_output, input_tensor=attention_output, training=training
)
outputs = (layer_output,) + outputs # add attentions if we output them
# if decoder, return the attn key/values as the last output
if self.is_decoder:
outputs = outputs + (present_key_value,)
return outputs
class TFEsmEncoder(Layer):
def __init__(self, config, name=None):
super().__init__(name=name)
self.config = config
self.layer = [TFEsmLayer(config, name=f"layer_._{i}") for i in range(config.num_hidden_layers)]
self.emb_layer_norm_after = LayerNormalization(epsilon=config.layer_norm_eps, name="emb_layer_norm_after")
def call(
self,
hidden_states,
attention_mask=None,
head_mask=None,
encoder_hidden_states=None,
encoder_attention_mask=None,
past_key_values=None,
use_cache=None,
output_attentions=False,
output_hidden_states=False,
return_dict=True,
training=False,
):
all_hidden_states = () if output_hidden_states else None
all_self_attentions = () if output_attentions else None
all_cross_attentions = () if output_attentions and self.config.add_cross_attention else None
next_decoder_cache = () if use_cache else None
for i, layer_module in enumerate(self.layer):
if output_hidden_states:
all_hidden_states = all_hidden_states + (hidden_states,)
layer_head_mask = head_mask[i] if head_mask is not None else None
past_key_value = past_key_values[i] if past_key_values is not None else None
layer_outputs = layer_module(
hidden_states,
attention_mask,
layer_head_mask,
encoder_hidden_states,
encoder_attention_mask,
past_key_value,
output_attentions,
training,
)
hidden_states = layer_outputs[0]
if use_cache:
next_decoder_cache += (layer_outputs[-1],)
if output_attentions:
all_self_attentions = all_self_attentions + (layer_outputs[1],)
if self.config.add_cross_attention:
all_cross_attentions = all_cross_attentions + (layer_outputs[2],)
if self.emb_layer_norm_after:
hidden_states = self.emb_layer_norm_after(hidden_states)
if output_hidden_states:
all_hidden_states = all_hidden_states + (hidden_states,)
if not return_dict:
return tuple(
v
for v in [
hidden_states,
next_decoder_cache,
all_hidden_states,
all_self_attentions,
all_cross_attentions,
]
if v is not None
)
return TFBaseModelOutputWithPastAndCrossAttentions(
last_hidden_state=hidden_states,
past_key_values=next_decoder_cache,
hidden_states=all_hidden_states,
attentions=all_self_attentions,
cross_attentions=all_cross_attentions,
)
# Copied from transformers.models.bert.modeling_tf_bert.TFBertPooler with Bert->Esm
class TFEsmPooler(Layer):
def __init__(self, config: EsmConfig, **kwargs):
super().__init__(**kwargs)
self.dense = tf.keras.layers.Dense(
units=config.hidden_size,
kernel_initializer=get_initializer(config.initializer_range),
activation="tanh",
name="dense",
)
def call(self, hidden_states: tf.Tensor) -> tf.Tensor:
# We "pool" the model by simply taking the hidden state corresponding
# to the first token.
first_token_tensor = hidden_states[:, 0]
pooled_output = self.dense(inputs=first_token_tensor)
return pooled_output
class TFEsmPreTrainedModel(TFPreTrainedModel):
"""
An abstract class to handle weights initialization and a simple interface for downloading and loading pretrained
models.
"""
config_class = EsmConfig
base_model_prefix = "esm"
ESM_START_DOCSTRING = r"""
This model inherits from [`TFPreTrainedModel`]. Check the superclass documentation for the generic methods the
library implements for all its model (such as downloading or saving, resizing the input embeddings, pruning heads
etc.)
This model is also a Keras [Model](https://www.tensorflow.org/api_docs/python/tf/keras/Model) subclass. Use it as a
regular Keras model and refer to the TF/Keras documentation for all matters related to general usage and behavior.
Parameters:
config ([`EsmConfig`]): Model configuration class with all the parameters of the
model. Initializing with a config file does not load the weights associated with the model, only the
configuration. Check out the [`~TFPreTrainedModel.from_pretrained`] method to load the model weights.
"""
ESM_INPUTS_DOCSTRING = r"""
Args:
input_ids (`tf.Tensor` of shape `({0})`):
Indices of input sequence tokens in the vocabulary.
Indices can be obtained using [`AutoTokenizer`]. See [`PreTrainedTokenizer.encode`] and
[`PreTrainedTokenizer.__call__`] for details.
[What are input IDs?](../glossary#input-ids)
attention_mask (`tf.Tensor` of shape `({0})`, *optional*):
Mask to avoid performing attention on padding token indices. Mask values selected in `[0, 1]`:
- 1 for tokens that are **not masked**,
- 0 for tokens that are **masked**.
[What are attention masks?](../glossary#attention-mask)
position_ids (`tf.Tensor` of shape `({0})`, *optional*):
Indices of positions of each input sequence tokens in the position embeddings. Selected in the range `[0,
config.max_position_embeddings - 1]`.
[What are position IDs?](../glossary#position-ids)
head_mask (`tf.Tensor` of shape `(num_heads,)` or `(num_layers, num_heads)`, *optional*):
Mask to nullify selected heads of the self-attention modules. Mask values selected in `[0, 1]`:
- 1 indicates the head is **not masked**,
- 0 indicates the head is **masked**.
inputs_embeds (`tf.Tensor` of shape `({0}, hidden_size)`, *optional*):
Optionally, instead of passing `input_ids` you can choose to directly pass an embedded representation. This
is useful if you want more control over how to convert `input_ids` indices into associated vectors than the
model's internal embedding lookup matrix.
output_attentions (`bool`, *optional*):
Whether or not to return the attentions tensors of all attention layers. See `attentions` under returned
tensors for more detail.
output_hidden_states (`bool`, *optional*):
Whether or not to return the hidden states of all layers. See `hidden_states` under returned tensors for
more detail.
return_dict (`bool`, *optional*):
Whether or not to return a [`~file_utils.ModelOutput`] instead of a plain tuple.
"""
@add_start_docstrings(
"The bare ESM Model transformer outputting raw hidden-states without any specific head on top.",
ESM_START_DOCSTRING,
)
class TFEsmMainLayer(Layer):
"""
The model can behave as an encoder (with only self-attention) as well as a decoder, in which case a layer of
cross-attention is added between the self-attention layers, following the architecture described in [Attention is
all you need](https://arxiv.org/abs/1706.03762) by Ashish Vaswani, Noam Shazeer, Niki Parmar, Jakob Uszkoreit,
Llion Jones, Aidan N. Gomez, Lukasz Kaiser and Illia Polosukhin.
To behave as an decoder the model needs to be initialized with the `is_decoder` argument of the configuration set
to `True`. To be used in a Seq2Seq model, the model needs to initialized with both `is_decoder` argument and
`add_cross_attention` set to `True`; an `encoder_hidden_states` is then expected as an input to the forward pass.
"""
_keys_to_ignore_on_load_missing = [r"position_ids"]
def __init__(self, config, add_pooling_layer=True, name=None, **kwargs):
super().__init__(name=name, **kwargs)
self.config = config
self.is_decoder = config.is_decoder
self.embeddings = TFEsmEmbeddings(config, name="embeddings")
self.encoder = TFEsmEncoder(config, name="encoder")
self.pooler = TFEsmPooler(config, name="pooler") if add_pooling_layer else None
self.contact_head = TFEsmContactPredictionHead(
in_features=self.config.num_hidden_layers * self.config.num_attention_heads, bias=True, name="contact_head"
)
def build(self, input_shape):
super().build(input_shape)
with tf.name_scope("contact_head"):
self.contact_head.build(input_shape)
def get_input_embeddings(self):
return self.embeddings.word_embeddings
def set_input_embeddings(self, value: tf.Variable):
self.embeddings.word_embeddings.weight = value
self.embeddings.vocab_size = shape_list(value)[0]
def _prune_heads(self, heads_to_prune):
raise NotImplementedError
def call(
self,
input_ids: TFModelInputType | None = None,
attention_mask: np.ndarray | tf.Tensor | None = None,
position_ids: np.ndarray | tf.Tensor | None = None,
head_mask: np.ndarray | tf.Tensor | None = None,
inputs_embeds: np.ndarray | tf.Tensor | None = None,
encoder_hidden_states: np.ndarray | tf.Tensor | None = None,
encoder_attention_mask: np.ndarray | tf.Tensor | None = None,
past_key_values: Optional[Tuple[Tuple[Union[np.ndarray, tf.Tensor]]]] = None,
use_cache: Optional[bool] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
training: bool = False,
) -> Union[TFBaseModelOutputWithPoolingAndCrossAttentions, Tuple[tf.Tensor]]:
if not self.config.is_decoder:
use_cache = False
if input_ids is not None and inputs_embeds is not None:
raise ValueError("You cannot specify both input_ids and inputs_embeds at the same time")
elif input_ids is not None:
input_shape = shape_list(input_ids)
elif inputs_embeds is not None:
input_shape = shape_list(inputs_embeds)[:-1]
else:
raise ValueError("You have to specify either input_ids or inputs_embeds")
batch_size, seq_length = input_shape
if past_key_values is None:
past_key_values_length = 0
past_key_values = [None] * len(self.encoder.layer)
else:
past_key_values_length = shape_list(past_key_values[0][0])[-2]
if attention_mask is None:
attention_mask = tf.fill(dims=(batch_size, seq_length + past_key_values_length), value=1)
embedding_output = self.embeddings(
input_ids=input_ids,
attention_mask=attention_mask,
position_ids=position_ids,
inputs_embeds=inputs_embeds,
past_key_values_length=past_key_values_length,
training=training,
)
# We create a 3D attention mask from a 2D tensor mask.
# Sizes are [batch_size, 1, 1, to_seq_length]
# So we can broadcast to [batch_size, num_heads, from_seq_length, to_seq_length]
# this attention mask is more simple than the triangular masking of causal attention
# used in OpenAI GPT, we just need to prepare the broadcast dimension here.
attention_mask_shape = shape_list(attention_mask)
mask_seq_length = seq_length + past_key_values_length
# Copied from `modeling_tf_t5.py`
# Provided a padding mask of dimensions [batch_size, mask_seq_length]
# - if the model is a decoder, apply a causal mask in addition to the padding mask
# - if the model is an encoder, make the mask broadcastable to [batch_size, num_heads, mask_seq_length, mask_seq_length]
if self.is_decoder:
seq_ids = tf.range(mask_seq_length)
causal_mask = tf.less_equal(
tf.tile(seq_ids[None, None, :], (batch_size, mask_seq_length, 1)),
seq_ids[None, :, None],
)
causal_mask = tf.cast(causal_mask, dtype=attention_mask.dtype)
extended_attention_mask = causal_mask * attention_mask[:, None, :]
attention_mask_shape = shape_list(extended_attention_mask)
extended_attention_mask = tf.reshape(
extended_attention_mask, (attention_mask_shape[0], 1, attention_mask_shape[1], attention_mask_shape[2])
)
if past_key_values[0] is not None:
# attention_mask needs to be sliced to the shape `[batch_size, 1, from_seq_length - cached_seq_length, to_seq_length]
extended_attention_mask = extended_attention_mask[:, :, -seq_length:, :]
else:
extended_attention_mask = tf.reshape(
attention_mask, (attention_mask_shape[0], 1, 1, attention_mask_shape[1])
)
# Since attention_mask is 1.0 for positions we want to attend and 0.0 for
# masked positions, this operation will create a tensor which is 0.0 for
# positions we want to attend and -10000.0 for masked positions.
# Since we are adding it to the raw scores before the softmax, this is
# effectively the same as removing these entirely.
extended_attention_mask = tf.cast(extended_attention_mask, dtype=embedding_output.dtype)
one_cst = tf.constant(1.0, dtype=embedding_output.dtype)
ten_thousand_cst = tf.constant(-10000.0, dtype=embedding_output.dtype)
extended_attention_mask = tf.multiply(tf.subtract(one_cst, extended_attention_mask), ten_thousand_cst)
# Copied from `modeling_tf_t5.py` with -1e9 -> -10000
if self.is_decoder and encoder_attention_mask is not None:
# If a 2D ou 3D attention mask is provided for the cross-attention
# we need to make broadcastable to [batch_size, num_heads, mask_seq_length, mask_seq_length]
# we need to make broadcastable to [batch_size, num_heads, seq_length, seq_length]
encoder_attention_mask = tf.cast(encoder_attention_mask, dtype=extended_attention_mask.dtype)
num_dims_encoder_attention_mask = len(shape_list(encoder_attention_mask))
if num_dims_encoder_attention_mask == 3:
encoder_extended_attention_mask = encoder_attention_mask[:, None, :, :]
if num_dims_encoder_attention_mask == 2:
encoder_extended_attention_mask = encoder_attention_mask[:, None, None, :]
# T5 has a mask that can compare sequence ids, we can simulate this here with this transposition
# Cf. https://github.com/tensorflow/mesh/blob/8d2465e9bc93129b913b5ccc6a59aa97abd96ec6/mesh_tensorflow/transformer/transformer_layers.py#L270
# encoder_extended_attention_mask = tf.math.equal(encoder_extended_attention_mask,
# tf.transpose(encoder_extended_attention_mask, perm=(-1, -2)))
encoder_extended_attention_mask = (1.0 - encoder_extended_attention_mask) * -10000.0
else:
encoder_extended_attention_mask = None
# Prepare head mask if needed
# 1.0 in head_mask indicate we keep the head
# attention_probs has shape bsz x n_heads x N x N
# input head_mask has shape [num_heads] or [num_hidden_layers x num_heads]
# and head_mask is converted to shape [num_hidden_layers x batch x num_heads x seq_length x seq_length]
if head_mask is not None:
raise NotImplementedError
else:
head_mask = [None] * self.config.num_hidden_layers
encoder_outputs = self.encoder(
hidden_states=embedding_output,
attention_mask=extended_attention_mask,
head_mask=head_mask,
encoder_hidden_states=encoder_hidden_states,
encoder_attention_mask=encoder_extended_attention_mask,
past_key_values=past_key_values,
use_cache=use_cache,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
training=training,
)
sequence_output = encoder_outputs[0]
pooled_output = self.pooler(hidden_states=sequence_output) if self.pooler is not None else None
if not return_dict:
return (
sequence_output,
pooled_output,
) + encoder_outputs[1:]
return TFBaseModelOutputWithPoolingAndCrossAttentions(
last_hidden_state=sequence_output,
pooler_output=pooled_output,
past_key_values=encoder_outputs.past_key_values,
hidden_states=encoder_outputs.hidden_states,
attentions=encoder_outputs.attentions,
cross_attentions=encoder_outputs.cross_attentions,
)
def predict_contacts(self, tokens, attention_mask):
attns = self(tokens, attention_mask=attention_mask, return_dict=True, output_attentions=True).attentions
attns = tf.stack(attns, axis=1) # Matches the original model layout
# In the original model, attentions for padding tokens are completely zeroed out.
# This makes no difference most of the time because the other tokens won't attend to them,
# but it does for the contact prediction task, which takes attentions as input,
# so we have to mimic that here.
attention_mask = tf.cast(attention_mask, attns.dtype)
attns *= attention_mask[:, None, None, None]
attns *= attention_mask[:, None, None, :, None]
return self.contact_head(tokens, attns)
@add_start_docstrings(
"The bare ESM Model transformer outputting raw hidden-states without any specific head on top.",
ESM_START_DOCSTRING,
)
class TFEsmModel(TFEsmPreTrainedModel):
def __init__(self, config: EsmConfig, add_pooling_layer=True, *inputs, **kwargs):
super().__init__(config, *inputs, **kwargs)
self.esm = TFEsmMainLayer(config, add_pooling_layer=add_pooling_layer, name="esm")
@unpack_inputs
@add_start_docstrings_to_model_forward(ESM_INPUTS_DOCSTRING.format("batch_size, sequence_length"))
@add_code_sample_docstrings(
checkpoint=_CHECKPOINT_FOR_DOC,
output_type=TFBaseModelOutputWithPoolingAndCrossAttentions,
config_class=_CONFIG_FOR_DOC,
)
def call(
self,
input_ids: TFModelInputType | None = None,
attention_mask: np.ndarray | tf.Tensor | None = None,
position_ids: np.ndarray | tf.Tensor | None = None,
head_mask: np.ndarray | tf.Tensor | None = None,
inputs_embeds: np.ndarray | tf.Tensor | None = None,
encoder_hidden_states: np.ndarray | tf.Tensor | None = None,
encoder_attention_mask: np.ndarray | tf.Tensor | None = None,
past_key_values: Optional[Tuple[Tuple[Union[np.ndarray, tf.Tensor]]]] = None,
use_cache: Optional[bool] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
training: Optional[bool] = False,
) -> Union[TFBaseModelOutputWithPoolingAndCrossAttentions, Tuple[tf.Tensor]]:
r"""
encoder_hidden_states (`tf.Tensor` of shape `(batch_size, sequence_length, hidden_size)`, *optional*):
Sequence of hidden-states at the output of the last layer of the encoder. Used in the cross-attention if
the model is configured as a decoder.
encoder_attention_mask (`tf.Tensor` of shape `(batch_size, sequence_length)`, *optional*):
Mask to avoid performing attention on the padding token indices of the encoder input. This mask is used in
the cross-attention if the model is configured as a decoder. Mask values selected in `[0, 1]`:
- 1 for tokens that are **not masked**,
- 0 for tokens that are **masked**.
past_key_values (`Tuple[Tuple[tf.Tensor]]` of length `config.n_layers`)
contains precomputed key and value hidden states of the attention blocks. Can be used to speed up decoding.
If `past_key_values` are used, the user can optionally input only the last `decoder_input_ids` (those that
don't have their past key value states given to this model) of shape `(batch_size, 1)` instead of all
`decoder_input_ids` of shape `(batch_size, sequence_length)`.
use_cache (`bool`, *optional*, defaults to `True`):
If set to `True`, `past_key_values` key value states are returned and can be used to speed up decoding (see
`past_key_values`). Set to `False` during training, `True` during generation
"""
outputs = self.esm(
input_ids=input_ids,
attention_mask=attention_mask,
position_ids=position_ids,
head_mask=head_mask,
inputs_embeds=inputs_embeds,
encoder_hidden_states=encoder_hidden_states,
encoder_attention_mask=encoder_attention_mask,
past_key_values=past_key_values,
use_cache=use_cache,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
training=training,
)
return outputs
def predict_contacts(self, tokens, attention_mask):
return self.esm.predict_contacts(tokens, attention_mask)
@add_start_docstrings("""ESM Model with a `language modeling` head on top.""", ESM_START_DOCSTRING)
class TFEsmForMaskedLM(TFEsmPreTrainedModel, TFMaskedLanguageModelingLoss):
_keys_to_ignore_on_load_missing = [r"position_ids"]
_keys_to_ignore_on_load_unexpected = [r"pooler"]
def __init__(self, config):
super().__init__(config)
if config.is_decoder:
logger.warning(
"If you want to use `EsmForMaskedLM` make sure `config.is_decoder=False` for "
"bi-directional self-attention."
)
self.esm = TFEsmMainLayer(config, add_pooling_layer=False, name="esm")
self.lm_head = TFEsmLMHead(config, name="lm_head")
if config.tie_word_embeddings:
# Ensure word embeddings are built so that we actually have something to tie
with tf.name_scope(os.path.join(self._name_scope(), "esm", "embeddings", "word_embeddings")):
self.esm.embeddings.word_embeddings.build((None, None))
self.lm_head.decoder = self.esm.embeddings.word_embeddings.weights[0]
def get_output_embeddings(self):
return self.lm_head.decoder
def set_output_embeddings(self, new_embeddings):
self.lm_head.decoder = new_embeddings
def get_lm_head(self):
return self.lm_head
@unpack_inputs
@add_start_docstrings_to_model_forward(ESM_INPUTS_DOCSTRING.format("batch_size, sequence_length"))
@add_code_sample_docstrings(
checkpoint=_CHECKPOINT_FOR_DOC,
output_type=TFMaskedLMOutput,
config_class=_CONFIG_FOR_DOC,
mask="<mask>",
)
def call(
self,
input_ids: TFModelInputType | None = None,
attention_mask: np.ndarray | tf.Tensor | None = None,
position_ids: np.ndarray | tf.Tensor | None = None,
head_mask: np.ndarray | tf.Tensor | None = None,
inputs_embeds: np.ndarray | tf.Tensor | None = None,
encoder_hidden_states: np.ndarray | tf.Tensor | None = None,
encoder_attention_mask: np.ndarray | tf.Tensor | None = None,
labels: np.ndarray | tf.Tensor | None = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
training: bool = False,
) -> Union[TFMaskedLMOutput, Tuple[tf.Tensor]]:
r"""
labels (`tf.Tensor` of shape `(batch_size, sequence_length)`, *optional*):
Labels for computing the masked language modeling loss. Indices should be in `[-100, 0, ...,
config.vocab_size]` (see `input_ids` docstring) Tokens with indices set to `-100` are ignored (masked), the
loss is only computed for the tokens with labels in `[0, ..., config.vocab_size]`
kwargs (`Dict[str, any]`, optional, defaults to *{}*):
Used to hide legacy arguments that have been deprecated.
"""
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
outputs = self.esm(
input_ids,
attention_mask=attention_mask,
position_ids=position_ids,
head_mask=head_mask,
inputs_embeds=inputs_embeds,
encoder_hidden_states=encoder_hidden_states,
encoder_attention_mask=encoder_attention_mask,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
training=training,
)
sequence_output = outputs[0]
prediction_scores = self.lm_head(sequence_output)
masked_lm_loss = None
if labels is not None:
masked_lm_loss = self.hf_compute_loss(labels=labels, logits=prediction_scores)
if not return_dict:
output = (prediction_scores,) + outputs[2:]
return ((masked_lm_loss,) + output) if masked_lm_loss is not None else output
return TFMaskedLMOutput(
loss=masked_lm_loss,
logits=prediction_scores,
hidden_states=outputs.hidden_states,
attentions=outputs.attentions,
)
def predict_contacts(self, tokens, attention_mask):
return self.esm.predict_contacts(tokens, attention_mask)
class TFEsmLMHead(Layer):
"""ESM Head for masked language modeling."""
def __init__(self, config, name=None):
super().__init__(name=name)
self.dense = Dense(
config.hidden_size, kernel_initializer=get_initializer(config.initializer_range), name="dense"
)
self.layer_norm = LayerNormalization(epsilon=config.layer_norm_eps, name="layer_norm")
if config.tie_word_embeddings:
self.decoder = None
else:
self.decoder = Dense(
config.vocab_size,
kernel_initializer=get_initializer(config.initializer_range),
name="decoder",
use_bias=False,
)
self.config = config
def build(self, input_shape):
super().build(input_shape)
# Separate bias to match the PT model and allow weight cross-loading to work
# Put it in the build so it gets the right name when adding it as a weight
self.bias = self.add_weight("bias", shape=(self.config.vocab_size,), initializer="zeros", trainable=True)
def get_bias(self):
return {"bias": self.bias}
def call(self, features):
x = self.dense(features)
x = gelu(x)
x = self.layer_norm(x)
# project back to size of vocabulary with bias
if self.config.tie_word_embeddings:
x = tf.matmul(x, self.decoder, transpose_b=True) + self.bias
else:
x = self.decoder(x) + self.bias
return x
@add_start_docstrings(
"""
ESM Model transformer with a sequence classification/regression head on top (a linear layer on top of the pooled
output) e.g. for GLUE tasks.
""",
ESM_START_DOCSTRING,
)
class TFEsmForSequenceClassification(TFEsmPreTrainedModel, TFSequenceClassificationLoss):
_keys_to_ignore_on_load_missing = [r"position_ids"]
def __init__(self, config):
super().__init__(config)
self.num_labels = config.num_labels
self.config = config
self.esm = TFEsmMainLayer(config, add_pooling_layer=False, name="esm")
self.classifier = TFEsmClassificationHead(config, name="classifier")
@unpack_inputs
@add_start_docstrings_to_model_forward(ESM_INPUTS_DOCSTRING.format("batch_size, sequence_length"))
@add_code_sample_docstrings(
checkpoint=_CHECKPOINT_FOR_DOC,
output_type=TFSequenceClassifierOutput,
config_class=_CONFIG_FOR_DOC,
)
def call(
self,
input_ids: TFModelInputType | None = None,
attention_mask: np.ndarray | tf.Tensor | None = None,
position_ids: np.ndarray | tf.Tensor | None = None,
head_mask: np.ndarray | tf.Tensor | None = None,
inputs_embeds: np.ndarray | tf.Tensor | None = None,
labels: np.ndarray | tf.Tensor | None = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
training: bool = False,
) -> Union[TFSequenceClassifierOutput, Tuple[tf.Tensor]]:
r"""
labels (`tf.Tensor` of shape `(batch_size,)`, *optional*):
Labels for computing the sequence classification/regression loss. Indices should be in `[0, ...,
config.num_labels - 1]`. If `config.num_labels == 1` a regression loss is computed (Mean-Square loss), If
`config.num_labels > 1` a classification loss is computed (Cross-Entropy).
"""
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
outputs = self.esm(
input_ids,
attention_mask=attention_mask,
position_ids=position_ids,
head_mask=head_mask,
inputs_embeds=inputs_embeds,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
training=training,
)
sequence_output = outputs[0]
logits = self.classifier(sequence_output)
loss = None if labels is None else self.hf_compute_loss(labels, logits)
if not return_dict:
output = (logits,) + outputs[2:]
return ((loss,) + output) if loss is not None else output
return TFSequenceClassifierOutput(
loss=loss,
logits=logits,
hidden_states=outputs.hidden_states,
attentions=outputs.attentions,
)
@add_start_docstrings(
"""
ESM Model with a token classification head on top (a linear layer on top of the hidden-states output) e.g. for
Named-Entity-Recognition (NER) tasks.
""",
ESM_START_DOCSTRING,
)
class TFEsmForTokenClassification(TFEsmPreTrainedModel, TFTokenClassificationLoss):
_keys_to_ignore_on_load_unexpected = [r"pooler"]
_keys_to_ignore_on_load_missing = [r"position_ids"]
def __init__(self, config):
super().__init__(config)
self.num_labels = config.num_labels
self.esm = TFEsmMainLayer(config, add_pooling_layer=False, name="esm")
self.dropout = Dropout(config.hidden_dropout_prob)
self.classifier = Dense(config.num_labels, name="classifier")
@unpack_inputs
@add_start_docstrings_to_model_forward(ESM_INPUTS_DOCSTRING.format("batch_size, sequence_length"))
@add_code_sample_docstrings(
checkpoint=_CHECKPOINT_FOR_DOC,
output_type=TFTokenClassifierOutput,
config_class=_CONFIG_FOR_DOC,
)
def call(
self,
input_ids: TFModelInputType | None = None,
attention_mask: np.ndarray | tf.Tensor | None = None,
position_ids: np.ndarray | tf.Tensor | None = None,
head_mask: np.ndarray | tf.Tensor | None = None,
inputs_embeds: np.ndarray | tf.Tensor | None = None,
labels: np.ndarray | tf.Tensor | None = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
training: bool = False,
) -> Union[TFTokenClassifierOutput, Tuple[tf.Tensor]]:
r"""
labels (`tf.Tensor` of shape `(batch_size, sequence_length)`, *optional*):
Labels for computing the token classification loss. Indices should be in `[0, ..., config.num_labels - 1]`.
"""
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
outputs = self.esm(
input_ids,
attention_mask=attention_mask,
position_ids=position_ids,
head_mask=head_mask,
inputs_embeds=inputs_embeds,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
training=training,
)
sequence_output = outputs[0]
sequence_output = self.dropout(sequence_output, training=training)
logits = self.classifier(sequence_output)
loss = None if labels is None else self.hf_compute_loss(labels, logits)
if not return_dict:
output = (logits,) + outputs[2:]
return ((loss,) + output) if loss is not None else output
return TFTokenClassifierOutput(
loss=loss,
logits=logits,
hidden_states=outputs.hidden_states,
attentions=outputs.attentions,
)
class TFEsmClassificationHead(Layer):
"""Head for sentence-level classification tasks."""
def __init__(self, config, name=None):
super().__init__(name=name)
self.dense = Dense(
config.hidden_size,
kernel_initializer=get_initializer(config.initializer_range),
activation="tanh",
name="dense",
)
self.dropout = Dropout(config.hidden_dropout_prob)
self.out_proj = Dense(
config.num_labels,
kernel_initializer=get_initializer(config.initializer_range),
activation="linear",
name="out_proj",
)
def call(self, features, training=False):
x = features[:, 0, :] # take <s> token (equiv. to [CLS])
x = self.dropout(x, training=training)
x = self.dense(x)
x = self.dropout(x, training=training)
x = self.out_proj(x)
return x
def create_position_ids_from_input_ids(input_ids, padding_idx, past_key_values_length=0):
"""
Replace non-padding symbols with their position numbers. Position numbers begin at padding_idx+1. Padding symbols
are ignored. This is modified from fairseq's `utils.make_positions`.
Args:
x: tf.Tensor x:
Returns: tf.Tensor
"""
# The series of casts and type-conversions here are carefully balanced to both work with ONNX export and XLA.
mask = tf.cast(input_ids != padding_idx, tf.int64)
incremental_indices = (tf.cumsum(mask, axis=1) + past_key_values_length) * mask
return incremental_indices + padding_idx
| 60,870 | 43.141407 | 153 | py |
transformers | transformers-main/src/transformers/models/esm/modeling_esm.py | # coding=utf-8
# Copyright 2022 Meta and The HuggingFace Inc. team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
""" PyTorch ESM model."""
import math
from typing import List, Optional, Tuple, Union
import torch
import torch.utils.checkpoint
from torch import nn
from torch.nn import BCEWithLogitsLoss, CrossEntropyLoss, MSELoss
from ...file_utils import add_code_sample_docstrings, add_start_docstrings, add_start_docstrings_to_model_forward
from ...modeling_outputs import (
BaseModelOutputWithPastAndCrossAttentions,
BaseModelOutputWithPoolingAndCrossAttentions,
MaskedLMOutput,
SequenceClassifierOutput,
TokenClassifierOutput,
)
from ...modeling_utils import PreTrainedModel, find_pruneable_heads_and_indices, prune_linear_layer
from ...utils import logging
from .configuration_esm import EsmConfig
logger = logging.get_logger(__name__)
_CHECKPOINT_FOR_DOC = "facebook/esm2_t6_8M_UR50D"
_CONFIG_FOR_DOC = "EsmConfig"
ESM_PRETRAINED_MODEL_ARCHIVE_LIST = [
"facebook/esm2_t6_8M_UR50D",
"facebook/esm2_t12_35M_UR50D",
# This is not a complete list of all ESM models!
# See all ESM models at https://huggingface.co/models?filter=esm
]
def rotate_half(x):
x1, x2 = x.chunk(2, dim=-1)
return torch.cat((-x2, x1), dim=-1)
def apply_rotary_pos_emb(x, cos, sin):
cos = cos[:, :, : x.shape[-2], :]
sin = sin[:, :, : x.shape[-2], :]
return (x * cos) + (rotate_half(x) * sin)
def gelu(x):
"""
This is the gelu implementation from the original ESM repo. Using F.gelu yields subtly wrong results.
"""
return x * 0.5 * (1.0 + torch.erf(x / math.sqrt(2.0)))
def symmetrize(x):
"Make layer symmetric in final two dimensions, used for contact prediction."
return x + x.transpose(-1, -2)
def average_product_correct(x):
"Perform average product correct, used for contact prediction."
a1 = x.sum(-1, keepdims=True)
a2 = x.sum(-2, keepdims=True)
a12 = x.sum((-1, -2), keepdims=True)
avg = a1 * a2
avg.div_(a12) # in-place to reduce memory
normalized = x - avg
return normalized
class RotaryEmbedding(torch.nn.Module):
"""
Rotary position embeddings based on those in
[RoFormer](https://huggingface.co/docs/transformers/model_doc/roformer). Query and keys are transformed by rotation
matrices which depend on their relative positions.
"""
def __init__(self, dim: int):
super().__init__()
# Generate and save the inverse frequency buffer (non trainable)
inv_freq = 1.0 / (10000 ** (torch.arange(0, dim, 2).float() / dim))
inv_freq = inv_freq
self.register_buffer("inv_freq", inv_freq)
self._seq_len_cached = None
self._cos_cached = None
self._sin_cached = None
def _update_cos_sin_tables(self, x, seq_dimension=2):
seq_len = x.shape[seq_dimension]
# Reset the tables if the sequence length has changed,
# or if we're on a new device (possibly due to tracing for instance)
if seq_len != self._seq_len_cached or self._cos_cached.device != x.device:
self._seq_len_cached = seq_len
t = torch.arange(x.shape[seq_dimension], device=x.device).type_as(self.inv_freq)
freqs = torch.outer(t, self.inv_freq)
emb = torch.cat((freqs, freqs), dim=-1).to(x.device)
self._cos_cached = emb.cos()[None, None, :, :]
self._sin_cached = emb.sin()[None, None, :, :]
return self._cos_cached, self._sin_cached
def forward(self, q: torch.Tensor, k: torch.Tensor) -> Tuple[torch.Tensor, torch.Tensor]:
self._cos_cached, self._sin_cached = self._update_cos_sin_tables(k, seq_dimension=-2)
return (
apply_rotary_pos_emb(q, self._cos_cached, self._sin_cached),
apply_rotary_pos_emb(k, self._cos_cached, self._sin_cached),
)
class EsmContactPredictionHead(nn.Module):
"""Performs symmetrization, apc, and computes a logistic regression on the output features"""
def __init__(
self,
in_features: int,
bias=True,
eos_idx: int = 2,
):
super().__init__()
self.in_features = in_features
self.eos_idx = eos_idx
self.regression = nn.Linear(in_features, 1, bias)
self.activation = nn.Sigmoid()
def forward(self, tokens, attentions):
# remove eos token attentions
eos_mask = tokens.ne(self.eos_idx).to(attentions)
eos_mask = eos_mask.unsqueeze(1) * eos_mask.unsqueeze(2)
attentions = attentions * eos_mask[:, None, None, :, :]
attentions = attentions[..., :-1, :-1]
# remove cls token attentions
attentions = attentions[..., 1:, 1:]
batch_size, layers, heads, seqlen, _ = attentions.size()
attentions = attentions.view(batch_size, layers * heads, seqlen, seqlen)
# features: batch x channels x tokens x tokens (symmetric)
attentions = attentions.to(
self.regression.weight.device
) # attentions always float32, may need to convert to float16
attentions = average_product_correct(symmetrize(attentions))
attentions = attentions.permute(0, 2, 3, 1)
return self.activation(self.regression(attentions).squeeze(3))
class EsmEmbeddings(nn.Module):
"""
Same as BertEmbeddings with a tiny tweak for positional embeddings indexing.
"""
def __init__(self, config):
super().__init__()
self.word_embeddings = nn.Embedding(config.vocab_size, config.hidden_size, padding_idx=config.pad_token_id)
if config.emb_layer_norm_before:
self.layer_norm = nn.LayerNorm(config.hidden_size, eps=config.layer_norm_eps)
else:
self.layer_norm = None
self.dropout = nn.Dropout(config.hidden_dropout_prob)
# position_ids (1, len position emb) is contiguous in memory and exported when serialized
self.position_embedding_type = getattr(config, "position_embedding_type", "absolute")
self.register_buffer(
"position_ids", torch.arange(config.max_position_embeddings).expand((1, -1)), persistent=False
)
self.padding_idx = config.pad_token_id
self.position_embeddings = nn.Embedding(
config.max_position_embeddings, config.hidden_size, padding_idx=self.padding_idx
)
self.token_dropout = config.token_dropout
self.mask_token_id = config.mask_token_id
def forward(
self, input_ids=None, attention_mask=None, position_ids=None, inputs_embeds=None, past_key_values_length=0
):
if position_ids is None:
if input_ids is not None:
# Create the position ids from the input token ids. Any padded tokens remain padded.
position_ids = create_position_ids_from_input_ids(input_ids, self.padding_idx, past_key_values_length)
else:
position_ids = self.create_position_ids_from_inputs_embeds(inputs_embeds)
if inputs_embeds is None:
inputs_embeds = self.word_embeddings(input_ids)
# Note that if we want to support ESM-1 (not 1b!) in future then we need to support an
# embedding_scale factor here.
embeddings = inputs_embeds
# Matt: ESM has the option to handle masking in MLM in a slightly unusual way. If the token_dropout
# flag is False then it is handled in the same was as BERT/RoBERTa. If it is set to True, however,
# masked tokens are treated as if they were selected for input dropout and zeroed out.
# This "mask-dropout" is compensated for when masked tokens are not present, by scaling embeddings by
# a factor of (fraction of unmasked tokens during training) / (fraction of unmasked tokens in sample).
# This is analogous to the way that dropout layers scale down outputs during evaluation when not
# actually dropping out values (or, equivalently, scale up their un-dropped outputs in training).
if self.token_dropout:
embeddings.masked_fill_((input_ids == self.mask_token_id).unsqueeze(-1), 0.0)
mask_ratio_train = 0.15 * 0.8 # Hardcoded as the ratio used in all ESM model training runs
src_lengths = attention_mask.sum(-1)
mask_ratio_observed = (input_ids == self.mask_token_id).sum(-1).float() / src_lengths
embeddings = (embeddings * (1 - mask_ratio_train) / (1 - mask_ratio_observed)[:, None, None]).to(
embeddings.dtype
)
if self.position_embedding_type == "absolute":
position_embeddings = self.position_embeddings(position_ids)
embeddings += position_embeddings
if self.layer_norm is not None:
embeddings = self.layer_norm(embeddings)
if attention_mask is not None:
embeddings = (embeddings * attention_mask.unsqueeze(-1)).to(embeddings.dtype)
# Matt: I think this line was copied incorrectly from BERT, disabling it for now.
# embeddings = self.dropout(embeddings)
return embeddings
def create_position_ids_from_inputs_embeds(self, inputs_embeds):
"""
We are provided embeddings directly. We cannot infer which are padded so just generate sequential position ids.
Args:
inputs_embeds: torch.Tensor
Returns: torch.Tensor
"""
input_shape = inputs_embeds.size()[:-1]
sequence_length = input_shape[1]
position_ids = torch.arange(
self.padding_idx + 1, sequence_length + self.padding_idx + 1, dtype=torch.long, device=inputs_embeds.device
)
return position_ids.unsqueeze(0).expand(input_shape)
class EsmSelfAttention(nn.Module):
def __init__(self, config, position_embedding_type=None):
super().__init__()
if config.hidden_size % config.num_attention_heads != 0 and not hasattr(config, "embedding_size"):
raise ValueError(
f"The hidden size ({config.hidden_size}) is not a multiple of the number of attention "
f"heads ({config.num_attention_heads})"
)
self.num_attention_heads = config.num_attention_heads
self.attention_head_size = int(config.hidden_size / config.num_attention_heads)
self.all_head_size = self.num_attention_heads * self.attention_head_size
self.query = nn.Linear(config.hidden_size, self.all_head_size)
self.key = nn.Linear(config.hidden_size, self.all_head_size)
self.value = nn.Linear(config.hidden_size, self.all_head_size)
self.dropout = nn.Dropout(config.attention_probs_dropout_prob)
self.position_embedding_type = position_embedding_type or getattr(
config, "position_embedding_type", "absolute"
)
self.rotary_embeddings = None
if self.position_embedding_type == "relative_key" or self.position_embedding_type == "relative_key_query":
self.max_position_embeddings = config.max_position_embeddings
self.distance_embedding = nn.Embedding(2 * config.max_position_embeddings - 1, self.attention_head_size)
elif self.position_embedding_type == "rotary":
self.rotary_embeddings = RotaryEmbedding(dim=self.attention_head_size)
self.is_decoder = config.is_decoder
def transpose_for_scores(self, x: torch.Tensor) -> torch.Tensor:
new_x_shape = x.size()[:-1] + (self.num_attention_heads, self.attention_head_size)
x = x.view(new_x_shape)
return x.permute(0, 2, 1, 3)
def forward(
self,
hidden_states: torch.Tensor,
attention_mask: Optional[torch.FloatTensor] = None,
head_mask: Optional[torch.FloatTensor] = None,
encoder_hidden_states: Optional[torch.FloatTensor] = None,
encoder_attention_mask: Optional[torch.FloatTensor] = None,
past_key_value: Optional[Tuple[Tuple[torch.FloatTensor]]] = None,
output_attentions: Optional[bool] = False,
) -> Tuple[torch.Tensor]:
mixed_query_layer = self.query(hidden_states)
# If this is instantiated as a cross-attention module, the keys
# and values come from an encoder; the attention mask needs to be
# such that the encoder's padding tokens are not attended to.
is_cross_attention = encoder_hidden_states is not None
if is_cross_attention and past_key_value is not None:
# reuse k,v, cross_attentions
key_layer = past_key_value[0]
value_layer = past_key_value[1]
attention_mask = encoder_attention_mask
elif is_cross_attention:
key_layer = self.transpose_for_scores(self.key(encoder_hidden_states))
value_layer = self.transpose_for_scores(self.value(encoder_hidden_states))
attention_mask = encoder_attention_mask
elif past_key_value is not None:
key_layer = self.transpose_for_scores(self.key(hidden_states))
value_layer = self.transpose_for_scores(self.value(hidden_states))
key_layer = torch.cat([past_key_value[0], key_layer], dim=2)
value_layer = torch.cat([past_key_value[1], value_layer], dim=2)
else:
key_layer = self.transpose_for_scores(self.key(hidden_states))
value_layer = self.transpose_for_scores(self.value(hidden_states))
query_layer = self.transpose_for_scores(mixed_query_layer)
# Matt: Our BERT model (which this code was derived from) scales attention logits down by sqrt(head_dim).
# ESM scales the query down by the same factor instead. Modulo numerical stability these are equivalent,
# but not when rotary embeddings get involved. Therefore, we scale the query here to match the original
# ESM code and fix rotary embeddings.
query_layer = query_layer * self.attention_head_size**-0.5
if self.is_decoder:
# if cross_attention save Tuple(torch.Tensor, torch.Tensor) of all cross attention key/value_states.
# Further calls to cross_attention layer can then reuse all cross-attention
# key/value_states (first "if" case)
# if uni-directional self-attention (decoder) save Tuple(torch.Tensor, torch.Tensor) of
# all previous decoder key/value_states. Further calls to uni-directional self-attention
# can concat previous decoder key/value_states to current projected key/value_states (third "elif" case)
# if encoder bi-directional self-attention `past_key_value` is always `None`
past_key_value = (key_layer, value_layer)
if self.position_embedding_type == "rotary":
query_layer, key_layer = self.rotary_embeddings(query_layer, key_layer)
# Take the dot product between "query" and "key" to get the raw attention scores.
attention_scores = torch.matmul(query_layer, key_layer.transpose(-1, -2))
if self.position_embedding_type == "relative_key" or self.position_embedding_type == "relative_key_query":
seq_length = hidden_states.size()[1]
position_ids_l = torch.arange(seq_length, dtype=torch.long, device=hidden_states.device).view(-1, 1)
position_ids_r = torch.arange(seq_length, dtype=torch.long, device=hidden_states.device).view(1, -1)
distance = position_ids_l - position_ids_r
positional_embedding = self.distance_embedding(distance + self.max_position_embeddings - 1)
positional_embedding = positional_embedding.to(dtype=query_layer.dtype) # fp16 compatibility
if self.position_embedding_type == "relative_key":
relative_position_scores = torch.einsum("bhld,lrd->bhlr", query_layer, positional_embedding)
attention_scores = attention_scores + relative_position_scores
elif self.position_embedding_type == "relative_key_query":
relative_position_scores_query = torch.einsum("bhld,lrd->bhlr", query_layer, positional_embedding)
relative_position_scores_key = torch.einsum("bhrd,lrd->bhlr", key_layer, positional_embedding)
attention_scores = attention_scores + relative_position_scores_query + relative_position_scores_key
if attention_mask is not None:
# Apply the attention mask is (precomputed for all layers in EsmModel forward() function)
attention_scores = attention_scores + attention_mask
# Normalize the attention scores to probabilities.
attention_probs = nn.functional.softmax(attention_scores, dim=-1)
# This is actually dropping out entire tokens to attend to, which might
# seem a bit unusual, but is taken from the original Transformer paper.
attention_probs = self.dropout(attention_probs)
# Mask heads if we want to
if head_mask is not None:
attention_probs = attention_probs * head_mask
context_layer = torch.matmul(attention_probs, value_layer)
context_layer = context_layer.permute(0, 2, 1, 3).contiguous()
new_context_layer_shape = context_layer.size()[:-2] + (self.all_head_size,)
context_layer = context_layer.view(new_context_layer_shape)
outputs = (context_layer, attention_probs) if output_attentions else (context_layer,)
if self.is_decoder:
outputs = outputs + (past_key_value,)
return outputs
class EsmSelfOutput(nn.Module):
def __init__(self, config):
super().__init__()
self.dense = nn.Linear(config.hidden_size, config.hidden_size)
self.dropout = nn.Dropout(config.hidden_dropout_prob)
def forward(self, hidden_states, input_tensor):
hidden_states = self.dense(hidden_states)
hidden_states = self.dropout(hidden_states)
hidden_states += input_tensor
return hidden_states
class EsmAttention(nn.Module):
def __init__(self, config):
super().__init__()
self.self = EsmSelfAttention(config)
self.output = EsmSelfOutput(config)
self.pruned_heads = set()
self.LayerNorm = nn.LayerNorm(config.hidden_size, eps=config.layer_norm_eps)
def prune_heads(self, heads):
if len(heads) == 0:
return
heads, index = find_pruneable_heads_and_indices(
heads, self.self.num_attention_heads, self.self.attention_head_size, self.pruned_heads
)
# Prune linear layers
self.self.query = prune_linear_layer(self.self.query, index)
self.self.key = prune_linear_layer(self.self.key, index)
self.self.value = prune_linear_layer(self.self.value, index)
self.output.dense = prune_linear_layer(self.output.dense, index, dim=1)
# Update hyper params and store pruned heads
self.self.num_attention_heads = self.self.num_attention_heads - len(heads)
self.self.all_head_size = self.self.attention_head_size * self.self.num_attention_heads
self.pruned_heads = self.pruned_heads.union(heads)
def forward(
self,
hidden_states,
attention_mask=None,
head_mask=None,
encoder_hidden_states=None,
encoder_attention_mask=None,
past_key_value=None,
output_attentions=False,
):
hidden_states_ln = self.LayerNorm(hidden_states)
self_outputs = self.self(
hidden_states_ln,
attention_mask,
head_mask,
encoder_hidden_states,
encoder_attention_mask,
past_key_value,
output_attentions,
)
attention_output = self.output(self_outputs[0], hidden_states)
outputs = (attention_output,) + self_outputs[1:] # add attentions if we output them
return outputs
class EsmIntermediate(nn.Module):
def __init__(self, config):
super().__init__()
self.dense = nn.Linear(config.hidden_size, config.intermediate_size)
def forward(self, hidden_states: torch.Tensor) -> torch.Tensor:
hidden_states = self.dense(hidden_states)
hidden_states = gelu(hidden_states)
return hidden_states
class EsmOutput(nn.Module):
def __init__(self, config):
super().__init__()
self.dense = nn.Linear(config.intermediate_size, config.hidden_size)
self.dropout = nn.Dropout(config.hidden_dropout_prob)
def forward(self, hidden_states, input_tensor):
hidden_states = self.dense(hidden_states)
hidden_states = self.dropout(hidden_states)
hidden_states += input_tensor
return hidden_states
class EsmLayer(nn.Module):
def __init__(self, config):
super().__init__()
self.chunk_size_feed_forward = config.chunk_size_feed_forward
self.seq_len_dim = 1
self.attention = EsmAttention(config)
self.is_decoder = config.is_decoder
self.add_cross_attention = config.add_cross_attention
if self.add_cross_attention:
if not self.is_decoder:
raise RuntimeError(f"{self} should be used as a decoder model if cross attention is added")
self.crossattention = EsmAttention(config)
self.intermediate = EsmIntermediate(config)
self.output = EsmOutput(config)
self.LayerNorm = nn.LayerNorm(config.hidden_size, eps=config.layer_norm_eps)
def forward(
self,
hidden_states,
attention_mask=None,
head_mask=None,
encoder_hidden_states=None,
encoder_attention_mask=None,
past_key_value=None,
output_attentions=False,
):
# decoder uni-directional self-attention cached key/values tuple is at positions 1,2
self_attn_past_key_value = past_key_value[:2] if past_key_value is not None else None
self_attention_outputs = self.attention(
hidden_states,
attention_mask,
head_mask,
output_attentions=output_attentions,
past_key_value=self_attn_past_key_value,
)
attention_output = self_attention_outputs[0]
# if decoder, the last output is tuple of self-attn cache
if self.is_decoder:
outputs = self_attention_outputs[1:-1]
present_key_value = self_attention_outputs[-1]
else:
outputs = self_attention_outputs[1:] # add self attentions if we output attention weights
cross_attn_present_key_value = None
if self.is_decoder and encoder_hidden_states is not None:
if not hasattr(self, "crossattention"):
raise AttributeError(
f"If `encoder_hidden_states` are passed, {self} has to be instantiated"
" with cross-attention layers by setting `config.add_cross_attention=True`"
)
# cross_attn cached key/values tuple is at positions 3,4 of past_key_value tuple
cross_attn_past_key_value = past_key_value[-2:] if past_key_value is not None else None
cross_attention_outputs = self.crossattention(
attention_output,
attention_mask,
head_mask,
encoder_hidden_states,
encoder_attention_mask,
cross_attn_past_key_value,
output_attentions,
)
attention_output = cross_attention_outputs[0]
outputs = outputs + cross_attention_outputs[1:-1] # add cross attentions if we output attention weights
# add cross-attn cache to positions 3,4 of present_key_value tuple
cross_attn_present_key_value = cross_attention_outputs[-1]
present_key_value = present_key_value + cross_attn_present_key_value
layer_output = self.feed_forward_chunk(attention_output)
outputs = (layer_output,) + outputs
# if decoder, return the attn key/values as the last output
if self.is_decoder:
outputs = outputs + (present_key_value,)
return outputs
def feed_forward_chunk(self, attention_output):
attention_output_ln = self.LayerNorm(attention_output)
intermediate_output = self.intermediate(attention_output_ln)
layer_output = self.output(intermediate_output, attention_output)
return layer_output
class EsmEncoder(nn.Module):
def __init__(self, config):
super().__init__()
self.config = config
self.layer = nn.ModuleList([EsmLayer(config) for _ in range(config.num_hidden_layers)])
self.emb_layer_norm_after = nn.LayerNorm(config.hidden_size, eps=config.layer_norm_eps)
self.gradient_checkpointing = False
def forward(
self,
hidden_states,
attention_mask=None,
head_mask=None,
encoder_hidden_states=None,
encoder_attention_mask=None,
past_key_values=None,
use_cache=None,
output_attentions=False,
output_hidden_states=False,
return_dict=True,
):
if self.gradient_checkpointing and self.training:
if use_cache:
logger.warning_once(
"`use_cache=True` is incompatible with `config.gradient_checkpointing=True`. Setting "
"`use_cache=False`..."
)
use_cache = False
all_hidden_states = () if output_hidden_states else None
all_self_attentions = () if output_attentions else None
all_cross_attentions = () if output_attentions and self.config.add_cross_attention else None
next_decoder_cache = () if use_cache else None
for i, layer_module in enumerate(self.layer):
if output_hidden_states:
all_hidden_states = all_hidden_states + (hidden_states,)
layer_head_mask = head_mask[i] if head_mask is not None else None
past_key_value = past_key_values[i] if past_key_values is not None else None
if self.gradient_checkpointing and self.training:
def create_custom_forward(module):
def custom_forward(*inputs):
return module(*inputs, past_key_value, output_attentions)
return custom_forward
layer_outputs = torch.utils.checkpoint.checkpoint(
create_custom_forward(layer_module),
hidden_states,
attention_mask,
layer_head_mask,
encoder_hidden_states,
encoder_attention_mask,
)
else:
layer_outputs = layer_module(
hidden_states,
attention_mask,
layer_head_mask,
encoder_hidden_states,
encoder_attention_mask,
past_key_value,
output_attentions,
)
hidden_states = layer_outputs[0]
if use_cache:
next_decoder_cache += (layer_outputs[-1],)
if output_attentions:
all_self_attentions = all_self_attentions + (layer_outputs[1],)
if self.config.add_cross_attention:
all_cross_attentions = all_cross_attentions + (layer_outputs[2],)
if self.emb_layer_norm_after:
hidden_states = self.emb_layer_norm_after(hidden_states)
if output_hidden_states:
all_hidden_states = all_hidden_states + (hidden_states,)
if not return_dict:
return tuple(
v
for v in [
hidden_states,
next_decoder_cache,
all_hidden_states,
all_self_attentions,
all_cross_attentions,
]
if v is not None
)
return BaseModelOutputWithPastAndCrossAttentions(
last_hidden_state=hidden_states,
past_key_values=next_decoder_cache,
hidden_states=all_hidden_states,
attentions=all_self_attentions,
cross_attentions=all_cross_attentions,
)
# Copied from transformers.models.bert.modeling_bert.BertPooler
class EsmPooler(nn.Module):
def __init__(self, config):
super().__init__()
self.dense = nn.Linear(config.hidden_size, config.hidden_size)
self.activation = nn.Tanh()
def forward(self, hidden_states: torch.Tensor) -> torch.Tensor:
# We "pool" the model by simply taking the hidden state corresponding
# to the first token.
first_token_tensor = hidden_states[:, 0]
pooled_output = self.dense(first_token_tensor)
pooled_output = self.activation(pooled_output)
return pooled_output
class EsmPreTrainedModel(PreTrainedModel):
"""
An abstract class to handle weights initialization and a simple interface for downloading and loading pretrained
models.
"""
config_class = EsmConfig
base_model_prefix = "esm"
_no_split_modules = ["EsmLayer", "EsmFoldTriangularSelfAttentionBlock"]
# Copied from transformers.models.bert.modeling_bert.BertPreTrainedModel._init_weights
def _init_weights(self, module):
"""Initialize the weights"""
if isinstance(module, nn.Linear):
# Slightly different from the TF version which uses truncated_normal for initialization
# cf https://github.com/pytorch/pytorch/pull/5617
module.weight.data.normal_(mean=0.0, std=self.config.initializer_range)
if module.bias is not None:
module.bias.data.zero_()
elif isinstance(module, nn.Embedding):
module.weight.data.normal_(mean=0.0, std=self.config.initializer_range)
if module.padding_idx is not None:
module.weight.data[module.padding_idx].zero_()
elif isinstance(module, nn.LayerNorm):
module.bias.data.zero_()
module.weight.data.fill_(1.0)
ESM_START_DOCSTRING = r"""
This model inherits from [`PreTrainedModel`]. Check the superclass documentation for the generic methods the
library implements for all its model (such as downloading or saving, resizing the input embeddings, pruning heads
etc.)
This model is also a PyTorch [torch.nn.Module](https://pytorch.org/docs/stable/nn.html#torch.nn.Module) subclass.
Use it as a regular PyTorch Module and refer to the PyTorch documentation for all matter related to general usage
and behavior.
Parameters:
config ([`EsmConfig`]): Model configuration class with all the parameters of the
model. Initializing with a config file does not load the weights associated with the model, only the
configuration. Check out the [`~PreTrainedModel.from_pretrained`] method to load the model weights.
"""
ESM_INPUTS_DOCSTRING = r"""
Args:
input_ids (`torch.LongTensor` of shape `({0})`):
Indices of input sequence tokens in the vocabulary.
Indices can be obtained using [`AutoTokenizer`]. See [`PreTrainedTokenizer.encode`] and
[`PreTrainedTokenizer.__call__`] for details.
[What are input IDs?](../glossary#input-ids)
attention_mask (`torch.FloatTensor` of shape `({0})`, *optional*):
Mask to avoid performing attention on padding token indices. Mask values selected in `[0, 1]`:
- 1 for tokens that are **not masked**,
- 0 for tokens that are **masked**.
[What are attention masks?](../glossary#attention-mask)
position_ids (`torch.LongTensor` of shape `({0})`, *optional*):
Indices of positions of each input sequence tokens in the position embeddings. Selected in the range `[0,
config.max_position_embeddings - 1]`.
[What are position IDs?](../glossary#position-ids)
head_mask (`torch.FloatTensor` of shape `(num_heads,)` or `(num_layers, num_heads)`, *optional*):
Mask to nullify selected heads of the self-attention modules. Mask values selected in `[0, 1]`:
- 1 indicates the head is **not masked**,
- 0 indicates the head is **masked**.
inputs_embeds (`torch.FloatTensor` of shape `({0}, hidden_size)`, *optional*):
Optionally, instead of passing `input_ids` you can choose to directly pass an embedded representation. This
is useful if you want more control over how to convert `input_ids` indices into associated vectors than the
model's internal embedding lookup matrix.
output_attentions (`bool`, *optional*):
Whether or not to return the attentions tensors of all attention layers. See `attentions` under returned
tensors for more detail.
output_hidden_states (`bool`, *optional*):
Whether or not to return the hidden states of all layers. See `hidden_states` under returned tensors for
more detail.
return_dict (`bool`, *optional*):
Whether or not to return a [`~file_utils.ModelOutput`] instead of a plain tuple.
"""
@add_start_docstrings(
"The bare ESM Model transformer outputting raw hidden-states without any specific head on top.",
ESM_START_DOCSTRING,
)
class EsmModel(EsmPreTrainedModel):
"""
The model can behave as an encoder (with only self-attention) as well as a decoder, in which case a layer of
cross-attention is added between the self-attention layers, following the architecture described in [Attention is
all you need](https://arxiv.org/abs/1706.03762) by Ashish Vaswani, Noam Shazeer, Niki Parmar, Jakob Uszkoreit,
Llion Jones, Aidan N. Gomez, Lukasz Kaiser and Illia Polosukhin.
To behave as an decoder the model needs to be initialized with the `is_decoder` argument of the configuration set
to `True`. To be used in a Seq2Seq model, the model needs to initialized with both `is_decoder` argument and
`add_cross_attention` set to `True`; an `encoder_hidden_states` is then expected as an input to the forward pass.
"""
supports_gradient_checkpointing = False
def __init__(self, config, add_pooling_layer=True):
super().__init__(config)
self.config = config
self.embeddings = EsmEmbeddings(config)
self.encoder = EsmEncoder(config)
self.pooler = EsmPooler(config) if add_pooling_layer else None
self.contact_head = EsmContactPredictionHead(
in_features=config.num_hidden_layers * config.num_attention_heads, bias=True
)
# Initialize weights and apply final processing
self.post_init()
def _set_gradient_checkpointing(self, module, value=False):
if isinstance(module, EsmEncoder):
module.gradient_checkpointing = value
def get_input_embeddings(self):
return self.embeddings.word_embeddings
def set_input_embeddings(self, value):
self.embeddings.word_embeddings = value
def _prune_heads(self, heads_to_prune):
"""
Prunes heads of the model. heads_to_prune: dict of {layer_num: list of heads to prune in this layer} See base
class PreTrainedModel
"""
for layer, heads in heads_to_prune.items():
self.encoder.layer[layer].attention.prune_heads(heads)
@add_start_docstrings_to_model_forward(ESM_INPUTS_DOCSTRING.format("(batch_size, sequence_length)"))
@add_code_sample_docstrings(
checkpoint=_CHECKPOINT_FOR_DOC,
output_type=BaseModelOutputWithPoolingAndCrossAttentions,
config_class=_CONFIG_FOR_DOC,
)
def forward(
self,
input_ids: Optional[torch.Tensor] = None,
attention_mask: Optional[torch.Tensor] = None,
position_ids: Optional[torch.Tensor] = None,
head_mask: Optional[torch.Tensor] = None,
inputs_embeds: Optional[torch.Tensor] = None,
encoder_hidden_states: Optional[torch.Tensor] = None,
encoder_attention_mask: Optional[torch.Tensor] = None,
past_key_values: Optional[List[torch.FloatTensor]] = None,
use_cache: Optional[bool] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[Tuple[torch.Tensor], BaseModelOutputWithPoolingAndCrossAttentions]:
r"""
encoder_hidden_states (`torch.FloatTensor` of shape `(batch_size, sequence_length, hidden_size)`, *optional*):
Sequence of hidden-states at the output of the last layer of the encoder. Used in the cross-attention if
the model is configured as a decoder.
encoder_attention_mask (`torch.FloatTensor` of shape `(batch_size, sequence_length)`, *optional*):
Mask to avoid performing attention on the padding token indices of the encoder input. This mask is used in
the cross-attention if the model is configured as a decoder. Mask values selected in `[0, 1]`:
- 1 for tokens that are **not masked**,
- 0 for tokens that are **masked**.
past_key_values (`tuple(tuple(torch.FloatTensor))` of length `config.n_layers` with each tuple having 4 tensors of shape `(batch_size, num_heads, sequence_length - 1, embed_size_per_head)`):
Contains precomputed key and value hidden states of the attention blocks. Can be used to speed up decoding.
If `past_key_values` are used, the user can optionally input only the last `decoder_input_ids` (those that
don't have their past key value states given to this model) of shape `(batch_size, 1)` instead of all
`decoder_input_ids` of shape `(batch_size, sequence_length)`.
use_cache (`bool`, *optional*):
If set to `True`, `past_key_values` key value states are returned and can be used to speed up decoding (see
`past_key_values`).
"""
output_attentions = output_attentions if output_attentions is not None else self.config.output_attentions
output_hidden_states = (
output_hidden_states if output_hidden_states is not None else self.config.output_hidden_states
)
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
if self.config.is_decoder:
use_cache = use_cache if use_cache is not None else self.config.use_cache
else:
use_cache = False
if input_ids is not None and inputs_embeds is not None:
raise ValueError("You cannot specify both input_ids and inputs_embeds at the same time")
elif input_ids is not None:
input_shape = input_ids.size()
elif inputs_embeds is not None:
input_shape = inputs_embeds.size()[:-1]
else:
raise ValueError("You have to specify either input_ids or inputs_embeds")
batch_size, seq_length = input_shape
device = input_ids.device if input_ids is not None else inputs_embeds.device
# past_key_values_length
past_key_values_length = past_key_values[0][0].shape[2] if past_key_values is not None else 0
if attention_mask is None:
attention_mask = torch.ones(((batch_size, seq_length + past_key_values_length)), device=device)
# We can provide a self-attention mask of dimensions [batch_size, from_seq_length, to_seq_length]
# ourselves in which case we just need to make it broadcastable to all heads.
extended_attention_mask: torch.Tensor = self.get_extended_attention_mask(attention_mask, input_shape)
# If a 2D or 3D attention mask is provided for the cross-attention
# we need to make broadcastable to [batch_size, num_heads, seq_length, seq_length]
if self.config.is_decoder and encoder_hidden_states is not None:
encoder_batch_size, encoder_sequence_length, _ = encoder_hidden_states.size()
encoder_hidden_shape = (encoder_batch_size, encoder_sequence_length)
if encoder_attention_mask is None:
encoder_attention_mask = torch.ones(encoder_hidden_shape, device=device)
encoder_extended_attention_mask = self.invert_attention_mask(encoder_attention_mask)
else:
encoder_extended_attention_mask = None
# Prepare head mask if needed
# 1.0 in head_mask indicate we keep the head
# attention_probs has shape bsz x n_heads x N x N
# input head_mask has shape [num_heads] or [num_hidden_layers x num_heads]
# and head_mask is converted to shape [num_hidden_layers x batch x num_heads x seq_length x seq_length]
head_mask = self.get_head_mask(head_mask, self.config.num_hidden_layers)
embedding_output = self.embeddings(
input_ids=input_ids,
position_ids=position_ids,
attention_mask=attention_mask,
inputs_embeds=inputs_embeds,
past_key_values_length=past_key_values_length,
)
encoder_outputs = self.encoder(
embedding_output,
attention_mask=extended_attention_mask,
head_mask=head_mask,
encoder_hidden_states=encoder_hidden_states,
encoder_attention_mask=encoder_extended_attention_mask,
past_key_values=past_key_values,
use_cache=use_cache,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
sequence_output = encoder_outputs[0]
pooled_output = self.pooler(sequence_output) if self.pooler is not None else None
if not return_dict:
return (sequence_output, pooled_output) + encoder_outputs[1:]
return BaseModelOutputWithPoolingAndCrossAttentions(
last_hidden_state=sequence_output,
pooler_output=pooled_output,
past_key_values=encoder_outputs.past_key_values,
hidden_states=encoder_outputs.hidden_states,
attentions=encoder_outputs.attentions,
cross_attentions=encoder_outputs.cross_attentions,
)
def predict_contacts(self, tokens, attention_mask):
attns = self(tokens, attention_mask=attention_mask, return_dict=True, output_attentions=True).attentions
attns = torch.stack(attns, dim=1) # Matches the original model layout
# In the original model, attentions for padding tokens are completely zeroed out.
# This makes no difference most of the time because the other tokens won't attend to them,
# but it does for the contact prediction task, which takes attentions as input,
# so we have to mimic that here.
attns *= attention_mask.unsqueeze(1).unsqueeze(2).unsqueeze(3)
attns *= attention_mask.unsqueeze(1).unsqueeze(2).unsqueeze(4)
return self.contact_head(tokens, attns)
@add_start_docstrings("""ESM Model with a `language modeling` head on top.""", ESM_START_DOCSTRING)
class EsmForMaskedLM(EsmPreTrainedModel):
_tied_weights_keys = ["lm_head.decoder.weight"]
def __init__(self, config):
super().__init__(config)
if config.is_decoder:
logger.warning(
"If you want to use `EsmForMaskedLM` make sure `config.is_decoder=False` for "
"bi-directional self-attention."
)
self.esm = EsmModel(config, add_pooling_layer=False)
self.lm_head = EsmLMHead(config)
self.init_weights()
def get_output_embeddings(self):
return self.lm_head.decoder
def set_output_embeddings(self, new_embeddings):
self.lm_head.decoder = new_embeddings
@add_start_docstrings_to_model_forward(ESM_INPUTS_DOCSTRING.format("batch_size, sequence_length"))
@add_code_sample_docstrings(
checkpoint=_CHECKPOINT_FOR_DOC,
output_type=MaskedLMOutput,
config_class=_CONFIG_FOR_DOC,
mask="<mask>",
)
def forward(
self,
input_ids: Optional[torch.LongTensor] = None,
attention_mask: Optional[torch.Tensor] = None,
position_ids: Optional[torch.LongTensor] = None,
head_mask: Optional[torch.Tensor] = None,
inputs_embeds: Optional[torch.FloatTensor] = None,
encoder_hidden_states: Optional[torch.FloatTensor] = None,
encoder_attention_mask: Optional[torch.Tensor] = None,
labels: Optional[torch.LongTensor] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[Tuple, MaskedLMOutput]:
r"""
labels (`torch.LongTensor` of shape `(batch_size, sequence_length)`, *optional*):
Labels for computing the masked language modeling loss. Indices should be in `[-100, 0, ...,
config.vocab_size]` (see `input_ids` docstring) Tokens with indices set to `-100` are ignored (masked), the
loss is only computed for the tokens with labels in `[0, ..., config.vocab_size]`
kwargs (`Dict[str, any]`, optional, defaults to *{}*):
Used to hide legacy arguments that have been deprecated.
"""
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
outputs = self.esm(
input_ids,
attention_mask=attention_mask,
position_ids=position_ids,
head_mask=head_mask,
inputs_embeds=inputs_embeds,
encoder_hidden_states=encoder_hidden_states,
encoder_attention_mask=encoder_attention_mask,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
sequence_output = outputs[0]
prediction_scores = self.lm_head(sequence_output)
masked_lm_loss = None
if labels is not None:
loss_fct = CrossEntropyLoss()
labels = labels.to(prediction_scores.device)
masked_lm_loss = loss_fct(prediction_scores.view(-1, self.config.vocab_size), labels.view(-1))
if not return_dict:
output = (prediction_scores,) + outputs[2:]
return ((masked_lm_loss,) + output) if masked_lm_loss is not None else output
return MaskedLMOutput(
loss=masked_lm_loss,
logits=prediction_scores,
hidden_states=outputs.hidden_states,
attentions=outputs.attentions,
)
def predict_contacts(self, tokens, attention_mask):
return self.esm.predict_contacts(tokens, attention_mask=attention_mask)
class EsmLMHead(nn.Module):
"""ESM Head for masked language modeling."""
def __init__(self, config):
super().__init__()
self.dense = nn.Linear(config.hidden_size, config.hidden_size)
self.layer_norm = nn.LayerNorm(config.hidden_size, eps=config.layer_norm_eps)
self.decoder = nn.Linear(config.hidden_size, config.vocab_size, bias=False)
self.bias = nn.Parameter(torch.zeros(config.vocab_size))
def forward(self, features, **kwargs):
x = self.dense(features)
x = gelu(x)
x = self.layer_norm(x)
# project back to size of vocabulary with bias
x = self.decoder(x) + self.bias
return x
@add_start_docstrings(
"""
ESM Model transformer with a sequence classification/regression head on top (a linear layer on top of the pooled
output) e.g. for GLUE tasks.
""",
ESM_START_DOCSTRING,
)
class EsmForSequenceClassification(EsmPreTrainedModel):
def __init__(self, config):
super().__init__(config)
self.num_labels = config.num_labels
self.config = config
self.esm = EsmModel(config, add_pooling_layer=False)
self.classifier = EsmClassificationHead(config)
self.init_weights()
@add_start_docstrings_to_model_forward(ESM_INPUTS_DOCSTRING.format("batch_size, sequence_length"))
@add_code_sample_docstrings(
checkpoint=_CHECKPOINT_FOR_DOC,
output_type=SequenceClassifierOutput,
config_class=_CONFIG_FOR_DOC,
)
def forward(
self,
input_ids: Optional[torch.LongTensor] = None,
attention_mask: Optional[torch.Tensor] = None,
position_ids: Optional[torch.LongTensor] = None,
head_mask: Optional[torch.Tensor] = None,
inputs_embeds: Optional[torch.FloatTensor] = None,
labels: Optional[torch.LongTensor] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[Tuple, SequenceClassifierOutput]:
r"""
labels (`torch.LongTensor` of shape `(batch_size,)`, *optional*):
Labels for computing the sequence classification/regression loss. Indices should be in `[0, ...,
config.num_labels - 1]`. If `config.num_labels == 1` a regression loss is computed (Mean-Square loss), If
`config.num_labels > 1` a classification loss is computed (Cross-Entropy).
"""
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
outputs = self.esm(
input_ids,
attention_mask=attention_mask,
position_ids=position_ids,
head_mask=head_mask,
inputs_embeds=inputs_embeds,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
sequence_output = outputs[0]
logits = self.classifier(sequence_output)
loss = None
if labels is not None:
labels = labels.to(logits.device)
if self.config.problem_type is None:
if self.num_labels == 1:
self.config.problem_type = "regression"
elif self.num_labels > 1 and (labels.dtype == torch.long or labels.dtype == torch.int):
self.config.problem_type = "single_label_classification"
else:
self.config.problem_type = "multi_label_classification"
if self.config.problem_type == "regression":
loss_fct = MSELoss()
if self.num_labels == 1:
loss = loss_fct(logits.squeeze(), labels.squeeze())
else:
loss = loss_fct(logits, labels)
elif self.config.problem_type == "single_label_classification":
loss_fct = CrossEntropyLoss()
loss = loss_fct(logits.view(-1, self.num_labels), labels.view(-1))
elif self.config.problem_type == "multi_label_classification":
loss_fct = BCEWithLogitsLoss()
loss = loss_fct(logits, labels)
if not return_dict:
output = (logits,) + outputs[2:]
return ((loss,) + output) if loss is not None else output
return SequenceClassifierOutput(
loss=loss,
logits=logits,
hidden_states=outputs.hidden_states,
attentions=outputs.attentions,
)
@add_start_docstrings(
"""
ESM Model with a token classification head on top (a linear layer on top of the hidden-states output) e.g. for
Named-Entity-Recognition (NER) tasks.
""",
ESM_START_DOCSTRING,
)
class EsmForTokenClassification(EsmPreTrainedModel):
def __init__(self, config):
super().__init__(config)
self.num_labels = config.num_labels
self.esm = EsmModel(config, add_pooling_layer=False)
self.dropout = nn.Dropout(config.hidden_dropout_prob)
self.classifier = nn.Linear(config.hidden_size, config.num_labels)
self.init_weights()
@add_start_docstrings_to_model_forward(ESM_INPUTS_DOCSTRING.format("batch_size, sequence_length"))
@add_code_sample_docstrings(
checkpoint=_CHECKPOINT_FOR_DOC,
output_type=TokenClassifierOutput,
config_class=_CONFIG_FOR_DOC,
)
def forward(
self,
input_ids: Optional[torch.LongTensor] = None,
attention_mask: Optional[torch.Tensor] = None,
position_ids: Optional[torch.LongTensor] = None,
head_mask: Optional[torch.Tensor] = None,
inputs_embeds: Optional[torch.FloatTensor] = None,
labels: Optional[torch.LongTensor] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[Tuple, TokenClassifierOutput]:
r"""
labels (`torch.LongTensor` of shape `(batch_size, sequence_length)`, *optional*):
Labels for computing the token classification loss. Indices should be in `[0, ..., config.num_labels - 1]`.
"""
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
outputs = self.esm(
input_ids,
attention_mask=attention_mask,
position_ids=position_ids,
head_mask=head_mask,
inputs_embeds=inputs_embeds,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
sequence_output = outputs[0]
sequence_output = self.dropout(sequence_output)
logits = self.classifier(sequence_output)
loss = None
if labels is not None:
loss_fct = CrossEntropyLoss()
labels = labels.to(logits.device)
loss = loss_fct(logits.view(-1, self.num_labels), labels.view(-1))
if not return_dict:
output = (logits,) + outputs[2:]
return ((loss,) + output) if loss is not None else output
return TokenClassifierOutput(
loss=loss,
logits=logits,
hidden_states=outputs.hidden_states,
attentions=outputs.attentions,
)
class EsmClassificationHead(nn.Module):
"""Head for sentence-level classification tasks."""
def __init__(self, config):
super().__init__()
self.dense = nn.Linear(config.hidden_size, config.hidden_size)
self.dropout = nn.Dropout(config.hidden_dropout_prob)
self.out_proj = nn.Linear(config.hidden_size, config.num_labels)
def forward(self, features, **kwargs):
x = features[:, 0, :] # take <s> token (equiv. to [CLS])
x = self.dropout(x)
x = self.dense(x)
x = torch.tanh(x)
x = self.dropout(x)
x = self.out_proj(x)
return x
def create_position_ids_from_input_ids(input_ids, padding_idx, past_key_values_length=0):
"""
Replace non-padding symbols with their position numbers. Position numbers begin at padding_idx+1. Padding symbols
are ignored. This is modified from fairseq's `utils.make_positions`.
Args:
x: torch.Tensor x:
Returns: torch.Tensor
"""
# The series of casts and type-conversions here are carefully balanced to both work with ONNX export and XLA.
mask = input_ids.ne(padding_idx).int()
incremental_indices = (torch.cumsum(mask, dim=1).type_as(mask) + past_key_values_length) * mask
return incremental_indices.long() + padding_idx
| 55,911 | 42.715403 | 198 | py |
transformers | transformers-main/src/transformers/models/esm/__init__.py | # Copyright 2022 Facebook and The HuggingFace Team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
from typing import TYPE_CHECKING
from ...utils import OptionalDependencyNotAvailable, _LazyModule, is_tf_available, is_torch_available
_import_structure = {
"configuration_esm": ["ESM_PRETRAINED_CONFIG_ARCHIVE_MAP", "EsmConfig"],
"tokenization_esm": ["EsmTokenizer"],
}
try:
if not is_torch_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
_import_structure["modeling_esm"] = [
"ESM_PRETRAINED_MODEL_ARCHIVE_LIST",
"EsmForMaskedLM",
"EsmForSequenceClassification",
"EsmForTokenClassification",
"EsmModel",
"EsmPreTrainedModel",
]
_import_structure["modeling_esmfold"] = ["EsmForProteinFolding", "EsmFoldPreTrainedModel"]
try:
if not is_tf_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
_import_structure["modeling_tf_esm"] = [
"TF_ESM_PRETRAINED_MODEL_ARCHIVE_LIST",
"TFEsmForMaskedLM",
"TFEsmForSequenceClassification",
"TFEsmForTokenClassification",
"TFEsmModel",
"TFEsmPreTrainedModel",
]
if TYPE_CHECKING:
from .configuration_esm import ESM_PRETRAINED_CONFIG_ARCHIVE_MAP, EsmConfig
from .tokenization_esm import EsmTokenizer
try:
if not is_torch_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
from .modeling_esm import (
ESM_PRETRAINED_MODEL_ARCHIVE_LIST,
EsmForMaskedLM,
EsmForSequenceClassification,
EsmForTokenClassification,
EsmModel,
EsmPreTrainedModel,
)
from .modeling_esmfold import EsmFoldPreTrainedModel, EsmForProteinFolding
try:
if not is_tf_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
from .modeling_tf_esm import (
TF_ESM_PRETRAINED_MODEL_ARCHIVE_LIST,
TFEsmForMaskedLM,
TFEsmForSequenceClassification,
TFEsmForTokenClassification,
TFEsmModel,
TFEsmPreTrainedModel,
)
else:
import sys
sys.modules[__name__] = _LazyModule(__name__, globals()["__file__"], _import_structure)
| 2,978 | 30.357895 | 101 | py |
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