repo stringlengths 2 99 | file stringlengths 13 225 | code stringlengths 0 18.3M | file_length int64 0 18.3M | avg_line_length float64 0 1.36M | max_line_length int64 0 4.26M | extension_type stringclasses 1
value |
|---|---|---|---|---|---|---|
pycbc | pycbc-master/pycbc/inference/models/brute_marg.py | # Copyright (C) 2020 Alex Nitz
# This program is free software; you can redistribute it and/or modify it
# under the terms of the GNU General Public License as published by the
# Free Software Foundation; either version 3 of the License, or (at your
# option) any later version.
#
# This program is distributed in the ho... | 7,614 | 32.108696 | 79 | py |
pycbc | pycbc-master/pycbc/inference/jump/normal.py | # Copyright (C) 2019 Collin Capano
# This program is free software; you can redistribute it and/or modify it
# under the terms of the GNU General Public License as published by the
# Free Software Foundation; either version 3 of the License, or (at your
# option) any later version.
#
# This program is distributed in t... | 20,231 | 35.454054 | 79 | py |
pycbc | pycbc-master/pycbc/inference/jump/discrete.py | # Copyright (C) 2020 Collin Capano
# This program is free software; you can redistribute it and/or modify it
# under the terms of the GNU General Public License as published by the
# Free Software Foundation; either version 3 of the License, or (at your
# option) any later version.
#
# This program is distributed in t... | 5,794 | 33.494048 | 79 | py |
pycbc | pycbc-master/pycbc/inference/jump/angular.py | # Copyright (C) 2020 Collin Capano
# This program is free software; you can redistribute it and/or modify it
# under the terms of the GNU General Public License as published by the
# Free Software Foundation; either version 3 of the License, or (at your
# option) any later version.
#
# This program is distributed in t... | 4,775 | 34.909774 | 78 | py |
pycbc | pycbc-master/pycbc/inference/jump/__init__.py | # Copyright (C) 2019 Collin Capano
# This program is free software; you can redistribute it and/or modify it
# under the terms of the GNU General Public License as published by the
# Free Software Foundation; either version 3 of the License, or (at your
# option) any later version.
#
# This program is distributed in t... | 3,211 | 36.788235 | 77 | py |
pycbc | pycbc-master/pycbc/inference/jump/bounded_normal.py | # Copyright (C) 2020 Collin Capano
# This program is free software; you can redistribute it and/or modify it
# under the terms of the GNU General Public License as published by the
# Free Software Foundation; either version 3 of the License, or (at your
# option) any later version.
#
# This program is distributed in t... | 4,652 | 33.723881 | 78 | py |
pycbc | pycbc-master/pycbc/waveform/waveform.py | # Copyright (C) 2012 Alex Nitz
#
# This program is free software; you can redistribute it and/or modify it
# under the terms of the GNU General Public License as published by the
# Free Software Foundation; either version 3 of the License, or (at your
# option) any later version.
#
# This program is distributed in the... | 57,449 | 39.860597 | 107 | py |
pycbc | pycbc-master/pycbc/waveform/pycbc_phenomC_tmplt.py | # Copyright (C) 2012 Prayush Kumar
#
# This program is free software; you can redistribute it and/or modify
# it under the terms of the GNU General Public License as published by
# the Free Software Foundation; either version 2 of the License, or
# (at your option) any later version.
#
# This program is distribut... | 15,018 | 37.022785 | 128 | py |
pycbc | pycbc-master/pycbc/waveform/supernovae.py | """Generate core-collapse supernovae waveform for core bounce and
subsequent postbounce oscillations.
"""
import numpy
import h5py
from pycbc.types import TimeSeries
_pc_dict = {}
def get_corecollapse_bounce(**kwargs):
""" Generates core bounce and postbounce waveform by using principal
component basis vect... | 1,893 | 34.735849 | 79 | py |
pycbc | pycbc-master/pycbc/waveform/spa_tmplt_cuda.py | #
# Apapted from code in LALSimInpspiralTaylorF2.c
#
# Copyright (C) 2007 Jolien Creighton, B.S. Sathyaprakash, Thomas Cokelaer
# Copyright (C) 2012 Leo Singer, Alex Nitz
# Adapted from code found in:
# - LALSimInspiralTaylorF2.c
#
# This program is free software; you can redistribute it and/or modify
# it und... | 3,243 | 32.443299 | 98 | py |
pycbc | pycbc-master/pycbc/waveform/ringdown.py | # Copyright (C) 2016 Miriam Cabero Mueller
#
# This program is free software; you can redistribute it and/or modify it
# under the terms of the GNU General Public License as published by the
# Free Software Foundation; either version 3 of the License, or (at your
# option) any later version.
#
# This program is distrib... | 54,746 | 43.329555 | 80 | py |
pycbc | pycbc-master/pycbc/waveform/plugin.py | """ Utilities for handling waveform plugins
"""
def add_custom_waveform(approximant, function, domain,
sequence=False, has_det_response=False,
force=False,):
""" Make custom waveform available to pycbc
Parameters
----------
approximant : str
The... | 4,171 | 37.275229 | 84 | py |
pycbc | pycbc-master/pycbc/waveform/compress.py | # Copyright (C) 2016 Alex Nitz, Collin Capano
#
# This program is free software; you can redistribute it and/or modify it
# under the terms of the GNU General Public License as published by the
# Free Software Foundation; either version 3 of the License, or (at your
# option) any later version.
#
# This program is dis... | 30,086 | 39.990463 | 79 | py |
pycbc | pycbc-master/pycbc/waveform/bank.py | # Copyright (C) 2012 Alex Nitz, Josh Willis, Andrew Miller
#
# This program is free software; you can redistribute it and/or modify it
# under the terms of the GNU General Public License as published by the
# Free Software Foundation; either version 3 of the License, or (at your
# option) any later version.
#
# This p... | 39,507 | 41.299786 | 121 | py |
pycbc | pycbc-master/pycbc/waveform/waveform_modes.py | # Copyright (C) 2020 Collin Capano, Alex Nitz
# This program is free software; you can redistribute it and/or modify it
# under the terms of the GNU General Public License as published by the
# Free Software Foundation; either version 3 of the License, or (at your
# option) any later version.
#
# This program is distr... | 11,042 | 33.509375 | 79 | py |
pycbc | pycbc-master/pycbc/waveform/utils.py | # Copyright (C) 2013 Alex Nitz
#
# This program is free software; you can redistribute it and/or modify it
# under the terms of the GNU General Public License as published by the
# Free Software Foundation; either version 3 of the License, or (at your
# option) any later version.
#
# This program is distributed in the... | 19,760 | 35.867537 | 127 | py |
pycbc | pycbc-master/pycbc/waveform/multiband.py | """ Tools and functions to calculate interpolate waveforms using multi-banding
"""
import numpy
from pycbc.types import TimeSeries, zeros
def multiband_fd_waveform(bands=None, lengths=None, overlap=0, **p):
""" Generate a fourier domain waveform using multibanding
Speed up generation of a fouerier domain wa... | 3,724 | 31.964602 | 79 | py |
pycbc | pycbc-master/pycbc/waveform/sinegauss.py | """ Generation of sine-Gaussian bursty type things
"""
import pycbc.types
import numpy
def fd_sine_gaussian(amp, quality, central_frequency, fmin, fmax, delta_f):
""" Generate a Fourier domain sine-Gaussian
Parameters
----------
amp: float
Amplitude of the sine-Gaussian
quality: float
... | 1,285 | 30.365854 | 76 | py |
pycbc | pycbc-master/pycbc/waveform/spa_tmplt.py | # Adapted from code in LALSimInspiralTaylorF2.c
#
# Copyright (C) 2007 Jolien Creighton, B.S. Sathyaprakash, Thomas Cokelaer
# Copyright (C) 2012 Leo Singer, Alex Nitz
#
# This program is free software you can redistribute it and/or modify
# it under the terms of the GNU General Public License as published by
# t... | 9,385 | 34.153558 | 100 | py |
pycbc | pycbc-master/pycbc/waveform/premerger.py | """ Waveform approximants for the pre-merger detection of gravitational waves
"""
import logging
def premerger_taylorf2(**p):
""" Generate time-shifted TaylorF2"""
from pycbc.waveform import get_fd_waveform
from pycbc.waveform.spa_tmplt import spa_length_in_time
from pycbc.waveform.utils import fd_tap... | 1,282 | 30.292683 | 80 | py |
pycbc | pycbc-master/pycbc/waveform/parameters.py | # Copyright (C) 2016 Collin Capano
#
# This program is free software; you can redistribute it and/or modify it
# under the terms of the GNU General Public License as published by the
# Free Software Foundation; either version 3 of the License, or (at your
# option) any later version.
#
# This program is distributed in ... | 29,135 | 44.811321 | 99 | py |
pycbc | pycbc-master/pycbc/waveform/utils_cuda.py | # Copyright (C) 2018 Josh Willis
#
# This program is free software; you can redistribute it and/or modify it
# under the terms of the GNU General Public License as published by the
# Free Software Foundation; either version 3 of the License, or (at your
# option) any later version.
#
# This program is distributed in th... | 3,136 | 29.163462 | 108 | py |
pycbc | pycbc-master/pycbc/waveform/__init__.py | from pycbc.waveform.waveform import *
from pycbc.waveform.utils import *
from pycbc.waveform.bank import *
from pycbc.waveform.ringdown import *
from pycbc.waveform.parameters import *
from pycbc.waveform.waveform_modes import (get_td_waveform_modes,
get_fd_waveform_modes)
fro... | 520 | 42.416667 | 65 | py |
pycbc | pycbc-master/pycbc/waveform/generator.py | # Copyright (C) 2016 Collin Capano, Alex Nitz, Christopher Biwer
# This program is free software; you can redistribute it and/or modify it
# under the terms of the GNU General Public License as published by the
# Free Software Foundation; either version 3 of the License, or (at your
# option) any later version.
#
# Th... | 51,496 | 42.238455 | 258 | py |
pycbc | pycbc-master/pycbc/waveform/decompress_cuda.py | # Copyright (C) 2016 Josh Willis
# This program is free software; you can redistribute it and/or modify it
# under the terms of the GNU General Public License as published by the
# Free Software Foundation; either version 3 of the License, or (at your
# option) any later version.
#
# This program is distributed in the... | 11,138 | 32.250746 | 119 | py |
pycbc | pycbc-master/pycbc/waveform/nltides.py | """ Utilities for introducing nonlinear tidal effects into waveform approximants
"""
import pycbc.conversions
import numpy
import lal
def nltides_fourier_phase_difference(f, delta_f, f0, amplitude, n, m1, m2):
"""Calculate the change to the Fourier phase change due
to non-linear tides. Note that the Fourier ph... | 2,683 | 30.952381 | 80 | py |
pycbc | pycbc-master/pycbc/waveform/decompress_cpu.py | # Copyright (C) 2016 Alex Nitz, Collin Capano
#
# This program is free software; you can redistribute it and/or modify it
# under the terms of the GNU General Public License as published by the
# Free Software Foundation; either version 3 of the License, or (at your
# option) any later version.
#
# This program is dis... | 2,155 | 40.461538 | 79 | py |
pycbc | pycbc-master/pycbc/waveform/SpinTaylorF2.py | # Copyright (C) 2013 Haris K
# Ported from LALSimulation's LALSimInspiralSpinTaylorF2.c
#
# This program is free software; you can redistribute it and/or modify
# it under the terms of the GNU General Public License as published by
# the Free Software Foundation; either version 2 of the License, or
# (at your opt... | 18,361 | 43.139423 | 701 | py |
pycbc | pycbc-master/pycbc/noise/gaussian.py | # Copyright (C) 2012 Alex Nitz
#
#
# This program is free software; you can redistribute it and/or modify it
# under the terms of the GNU General Public License as published by the
# Free Software Foundation; either version 3 of the License, or (at your
# option) any later version.
#
# This program is distributed in t... | 5,192 | 30.472727 | 97 | py |
pycbc | pycbc-master/pycbc/noise/__init__.py | from .gaussian import noise_from_psd, noise_from_string, frequency_noise_from_psd # noqa
| 89 | 44 | 88 | py |
pycbc | pycbc-master/pycbc/noise/reproduceable.py | # Copyright (C) 2017 Alex Nitz
#
#
# This program is free software; you can redistribute it and/or modify it
# under the terms of the GNU General Public License as published by the
# Free Software Foundation; either version 3 of the License, or (at your
# option) any later version.
#
# This program is distributed in t... | 8,316 | 35.964444 | 79 | py |
pycbc | pycbc-master/pycbc/fft/backend_mkl.py | # Copyright (C) 2014 Josh Willis
#
# This program is free software; you can redistribute it and/or modify
# it under the terms of the GNU General Public License as published by
# the Free Software Foundation; either version 2 of the License, or
# (at your option) any later version.
#
# This program is distributed... | 1,197 | 30.526316 | 71 | py |
pycbc | pycbc-master/pycbc/fft/core.py | # Copyright (C) 2012 Josh Willis, Andrew Miller
#
# This program is free software; you can redistribute it and/or modify it
# under the terms of the GNU General Public License as published by the
# Free Software Foundation; either version 3 of the License, or (at your
# option) any later version.
#
# This program is d... | 11,855 | 41.647482 | 98 | py |
pycbc | pycbc-master/pycbc/fft/mkl.py | import ctypes, pycbc.libutils
from pycbc.types import zeros
from .core import _BaseFFT, _BaseIFFT
import pycbc.scheme as _scheme
lib = pycbc.libutils.get_ctypes_library('mkl_rt', [])
if lib is None:
raise ImportError
#MKL constants taken from mkl_df_defines.h
DFTI_FORWARD_DOMAIN = 0
DFTI_DIMENSION = 1
DFTI_LENGT... | 6,206 | 31.160622 | 84 | py |
pycbc | pycbc-master/pycbc/fft/backend_support.py | # Copyright (C) 2012 Josh Willis, Andrew Miller
#
# This program is free software; you can redistribute it and/or modify it
# under the terms of the GNU General Public License as published by the
# Free Software Foundation; either version 3 of the License, or (at your
# option) any later version.
#
# This program is d... | 3,126 | 36.22619 | 93 | py |
pycbc | pycbc-master/pycbc/fft/fftw_pruned.py | """This module provides a functions to perform a pruned FFT based on FFTW
This should be considered a test and example module, as the functionality
can and should be generalized to other FFT backends, and precisions.
These functions largely implemented the generic FFT decomposition as
described rather nicely by wikip... | 7,186 | 29.45339 | 82 | py |
pycbc | pycbc-master/pycbc/fft/fftw.py | import os
from pycbc.types import zeros
import numpy as _np
import ctypes
import pycbc.scheme as _scheme
from pycbc.libutils import get_ctypes_library
from .core import _BaseFFT, _BaseIFFT
from ..types import check_aligned
# IMPORTANT NOTE TO PYCBC DEVELOPERS:
# Because this module is loaded automatically when present... | 22,788 | 41.201852 | 109 | py |
pycbc | pycbc-master/pycbc/fft/backend_cpu.py | # Copyright (C) 2014 Josh Willis
#
# This program is free software; you can redistribute it and/or modify
# it under the terms of the GNU General Public License as published by
# the Free Software Foundation; either version 2 of the License, or
# (at your option) any later version.
#
# This program is distributed... | 1,285 | 30.365854 | 71 | py |
pycbc | pycbc-master/pycbc/fft/cuda_pyfft.py | # Copyright (C) 2012 Andrew Miller
#
# This program is free software; you can redistribute it and/or modify it
# under the terms of the GNU General Public License as published by the
# Free Software Foundation; either version 3 of the License, or (at your
# option) any later version.
#
# This program is distributed in... | 2,283 | 33.089552 | 87 | py |
pycbc | pycbc-master/pycbc/fft/parser_support.py | # Copyright (C) 2012 Josh Willis, Andrew Miller
#
# This program is free software; you can redistribute it and/or modify it
# under the terms of the GNU General Public License as published by the
# Free Software Foundation; either version 3 of the License, or (at your
# option) any later version.
#
# This program is d... | 4,879 | 36.829457 | 88 | py |
pycbc | pycbc-master/pycbc/fft/func_api.py | # Copyright (C) 2012 Josh Willis, Andrew Miller
#
# This program is free software; you can redistribute it and/or modify it
# under the terms of the GNU General Public License as published by the
# Free Software Foundation; either version 3 of the License, or (at your
# option) any later version.
#
# This program is d... | 3,470 | 35.925532 | 79 | py |
pycbc | pycbc-master/pycbc/fft/backend_cuda.py | # Copyright (C) 2014 Josh Willis
#
# This program is free software; you can redistribute it and/or modify
# it under the terms of the GNU General Public License as published by
# the Free Software Foundation; either version 2 of the License, or
# (at your option) any later version.
#
# This program is distributed... | 1,315 | 28.909091 | 71 | py |
pycbc | pycbc-master/pycbc/fft/fft_callback.py | #!/usr/bin/python
import os, subprocess, ctypes
from mako.template import Template
full_corr = """
__device__ cufftComplex in_call(void* input, size_t offset,
void* caller_info, void* shared) {
cufftComplex r;
cufftComplex* hp = ((cufftComplex*) callback_params.hti... | 8,478 | 31.737452 | 121 | py |
pycbc | pycbc-master/pycbc/fft/class_api.py | # Copyright (C) 2012 Josh Willis, Andrew Miller
#
# This program is free software; you can redistribute it and/or modify it
# under the terms of the GNU General Public License as published by the
# Free Software Foundation; either version 3 of the License, or (at your
# option) any later version.
#
# This program is d... | 3,391 | 36.274725 | 79 | py |
pycbc | pycbc-master/pycbc/fft/__init__.py | # Copyright (C) 2012 Josh Willis, Andrew Miller
#
# This program is free software; you can redistribute it and/or modify it
# under the terms of the GNU General Public License as published by the
# Free Software Foundation; either version 3 of the License, or (at your
# option) any later version.
#
# This program is d... | 952 | 44.380952 | 81 | py |
pycbc | pycbc-master/pycbc/fft/npfft.py | # Copyright (C) 2012 Josh Willis
#
# This program is free software; you can redistribute it and/or modify it
# under the terms of the GNU General Public License as published by the
# Free Software Foundation; either version 3 of the License, or (at your
# option) any later version.
#
# This program is distributed in t... | 3,765 | 37.824742 | 79 | py |
pycbc | pycbc-master/pycbc/fft/cufft.py | # Copyright (C) 2012 Josh Willis, Andrew Miller
#
# This program is free software; you can redistribute it and/or modify it
# under the terms of the GNU General Public License as published by the
# Free Software Foundation; either version 3 of the License, or (at your
# option) any later version.
#
# This program is d... | 3,710 | 35.029126 | 87 | py |
pycbc | pycbc-master/pycbc/inject/__init__.py | from pycbc.inject.injfilterrejector import *
from pycbc.inject.inject import *
| 79 | 25.666667 | 44 | py |
pycbc | pycbc-master/pycbc/inject/injfilterrejector.py | # Copyright (C) 2013 Ian Harry
#
# This program is free software; you can redistribute it and/or modify it
# under the terms of the GNU General Public License as published by the
# Free Software Foundation; either version 3 of the License, or (at your
# option) any later version.
#
# This program is distributed in the ... | 19,409 | 49.025773 | 79 | py |
pycbc | pycbc-master/pycbc/inject/inject.py | # Copyright (C) 2012 Alex Nitz, Tito Dal Canton
#
#
# This program is free software; you can redistribute it and/or modify it
# under the terms of the GNU General Public License as published by the
# Free Software Foundation; either version 3 of the License, or (at your
# option) any later version.
#
# This program is... | 48,285 | 37.080442 | 79 | py |
pycbc | pycbc-master/examples/overlap.py | from pycbc.waveform import get_td_waveform
from pycbc.filter import match, overlap
from pycbc.psd import aLIGOZeroDetHighPower
# Buffer size in seconds. This is presumed to be
# longer than the longest waveform.
time_buffer = 4
f_low = 30
sample_rate = 4096
# Length of corresponding time series and frequency series
... | 1,520 | 28.823529 | 69 | py |
pycbc | pycbc-master/examples/detector/delay.py | from pycbc.detector import Detector
from astropy.utils import iers
# Make sure the documentation can be built without an internet connection
iers.conf.auto_download = False
# The source of the gravitational waves
right_ascension = 0.7
declination = -0.5
# Reference location will be the Hanford detector
# see the `ti... | 785 | 30.44 | 77 | py |
pycbc | pycbc-master/examples/detector/ant.py | from pycbc.detector import Detector
from pycbc.waveform import get_td_waveform
# Time, orientation and location of the source in the sky
ra = 1.7
dec = 1.7
pol = 0.2
inc = 0
time = 1000000000
# We can calcualate the antenna pattern for Hanford at
# the specific sky location
d = Detector("H1")
# We get back the fp an... | 997 | 27.514286 | 73 | py |
pycbc | pycbc-master/examples/detector/loc.py | from pycbc.detector import Detector, get_available_detectors
# We can list the available detectors. This gives their detector abbreviation
# along with a longer name. Note that some of these are not physical detectors
# but may be useful for testing or study purposes
for abv in get_available_detectors():
d = Dete... | 550 | 38.357143 | 78 | py |
pycbc | pycbc-master/examples/detector/travel.py | from pycbc.detector import Detector
for ifo1 in ['H1', 'L1', 'V1']:
for ifo2 in ['H1', 'L1', 'V1']:
dt = Detector(ifo1).light_travel_time_to_detector(Detector(ifo2))
print("Direct Time from {} to {} is {} seconds".format(ifo1, ifo2, dt))
| 259 | 36.142857 | 79 | py |
pycbc | pycbc-master/examples/psd/estimate.py | import matplotlib.pyplot as pp
import pycbc.noise
import pycbc.psd
# generate some colored gaussian noise
flow = 30.0
delta_f = 1.0 / 16
flen = int(2048 / delta_f) + 1
psd = pycbc.psd.aLIGOZeroDetHighPower(flen, delta_f, flow)
### Generate 128 seconds of noise at 4096 Hz
delta_t = 1.0 / 4096
tsamples = int(128 / del... | 884 | 26.65625 | 76 | py |
pycbc | pycbc-master/examples/psd/analytic.py | import matplotlib.pyplot as pp
import pycbc.psd
# List the available analytic psds
print(pycbc.psd.get_lalsim_psd_list())
delta_f = 1.0 / 4
flen = int(1024 / delta_f)
low_frequency_cutoff = 30.0
# One can either call the psd generator by name
p1 = pycbc.psd.aLIGOZeroDetHighPower(flen, delta_f, low_frequency_cutoff)... | 576 | 25.227273 | 87 | py |
pycbc | pycbc-master/examples/psd/read.py | import matplotlib.pyplot as pp
import pycbc.psd
import pycbc.types
filename = 'example_psd.txt'
# The PSD will be interpolated to the requested frequency spacing
delta_f = 1.0 / 4
length = int(1024 / delta_f)
low_frequency_cutoff = 30.0
psd = pycbc.psd.from_txt(filename, length, delta_f,
low... | 742 | 26.518519 | 70 | py |
pycbc | pycbc-master/examples/distributions/spin_spatial_distr_example.py | import numpy
import matplotlib.pyplot as plt
import pycbc.coordinates as co
from pycbc import distributions
# We can choose any bounds between 0 and pi for this distribution but in units
# of pi so we use between 0 and 1.
theta_low = 0.
theta_high = 1.
# Units of pi for the bounds of the azimuthal angle which goes fr... | 1,933 | 36.921569 | 78 | py |
pycbc | pycbc-master/examples/distributions/mchirp_q_from_uniform_m1m2_example.py | import matplotlib.pyplot as plt
from pycbc import distributions
from pycbc import conversions
import numpy as np
# Create chirp mass and mass ratio distribution object that is uniform
# in mass1 and mass2
minmc = 5
maxmc = 60
mc_distribution = distributions.MchirpfromUniformMass1Mass2(mc=(minmc,maxmc))
# generate q in... | 1,986 | 30.046875 | 77 | py |
pycbc | pycbc-master/examples/distributions/sampling_from_config_example.py | import numpy as np
import matplotlib.pyplot as plt
from pycbc.distributions.utils import draw_samples_from_config
# A path to the .ini file.
CONFIG_PATH = "./pycbc_bbh_prior.ini"
random_seed = np.random.randint(low=0, high=2**32-1)
# Draw a single sample.
sample = draw_samples_from_config(
path=CONFIG_PA... | 1,236 | 27.113636 | 69 | py |
pycbc | pycbc-master/examples/distributions/mass_examples.py | import matplotlib.pyplot as plt
from pycbc import distributions
# Create a mass distribution object that is uniform between 0.5 and 1.5
# solar masses.
mass1_distribution = distributions.Uniform(mass1=(0.5, 1.5))
# Take 100000 random variable samples from this uniform mass distribution.
mass1_samples = mass1_distribut... | 1,651 | 35.711111 | 77 | py |
pycbc | pycbc-master/examples/distributions/list_distributions.py | from pycbc import distributions
# print all distribution names
print(distributions.distribs.keys())
| 100 | 24.25 | 36 | py |
pycbc | pycbc-master/examples/distributions/spin_examples.py | import matplotlib.pyplot as plt
import numpy
import pycbc.coordinates as co
from pycbc import distributions
# We can choose any bounds between 0 and pi for this distribution but in
# units of pi so we use between 0 and 1
theta_low = 0.
theta_high = 1.
# Units of pi for the bounds of the azimuthal angle which goes fro... | 1,894 | 32.245614 | 78 | py |
pycbc | pycbc-master/examples/catalog/data.py | import matplotlib.pyplot as pp
import pycbc.catalog
m = pycbc.catalog.Merger("GW170817", source='gwtc-1')
fig, axs = pp.subplots(2, 1, sharex=True, sharey=True)
for ifo, ax in zip(["L1", "H1"], axs):
pp.sca(ax)
pp.title(ifo)
# Retreive data around the BNS merger
ts = m.strain(ifo).time_slice(m.time -... | 716 | 26.576923 | 62 | py |
pycbc | pycbc-master/examples/catalog/stat.py | import matplotlib.pyplot as pp
import pycbc.catalog
c = pycbc.catalog.Catalog(source='gwtc-2')
mchirp, elow, ehigh = c.median1d('mchirp', return_errors=True)
spin = c.median1d('chi_eff')
pp.errorbar(mchirp, spin, xerr=[-elow, ehigh], fmt='o', markersize=7)
pp.xlabel('Chirp Mass')
pp.xscale('log')
pp.ylabel('Effectiv... | 339 | 23.285714 | 69 | py |
pycbc | pycbc-master/examples/catalog/what.py | import pycbc.catalog
c = pycbc.catalog.Catalog(source='gwtc-2')
# Names of mergers in the catalog
print(c.names)
# Approximate GPS time of the mergers
print([c[m].time for m in c])
| 184 | 17.5 | 42 | py |
pycbc | pycbc-master/examples/multi_inspiral/check_faceon_faceaway_trigs.py | #!/usr/bin/env python
# Read a pycbc_multi_inspiral HDF5 trigger file and check that it contains
# triggers compatible with mock GW170817-like injections
# 2022 Andrew Williamson, Tito Dal Canton
import sys
import logging
import h5py
import numpy as np
from pycbc import init_logging
init_logging(True)
gw170817_time =... | 1,158 | 29.5 | 79 | py |
pycbc | pycbc-master/examples/multi_inspiral/check_gw170817_trigs.py | #!/usr/bin/env python
# Read a pycbc_multi_inspiral HDF5 trigger file and check that it contains
# triggers compatible with mock GW170817-like injections
# 2022 Andrew Williamson, Tito Dal Canton
import sys
import logging
import h5py
import numpy as np
from pycbc import init_logging
init_logging(True)
gw170817_time =... | 957 | 23.564103 | 79 | py |
pycbc | pycbc-master/examples/filter/fir.py | # Apply an FIR filter. The algorithm is written for high performance so if you
# have a large number of taps, it will resort to a FFT based implementation
# under the hood.
import pycbc.types
import pycbc.filter.resample
# Reference time series
ts = pycbc.types.TimeSeries([-1, 1, -1, 1, -1], delta_t=1.0)
# May also b... | 624 | 30.25 | 81 | py |
pycbc | pycbc-master/examples/filter/snr.py | import matplotlib.pyplot as pp
import pycbc.noise
import pycbc.psd
import pycbc.filter
import pycbc.waveform
# Generate some noise with an advanced ligo psd
flow = 30.0
delta_f = 1.0 / 16
flen = int(2048 / delta_f) + 1
psd = pycbc.psd.aLIGOZeroDetHighPower(flen, delta_f, flow)
# Generate 16 seconds of noise at 4096 ... | 949 | 26.941176 | 69 | py |
pycbc | pycbc-master/examples/filter/chisq.py | """This example shows how to calculate the chi^2 discriminator described in
https://arxiv.org/abs/gr-qc/0405045, also known as the "power chi^2" or "Allen
chi^2" discriminator.
"""
import matplotlib.pyplot as pp
import pycbc.noise
import pycbc.psd
import pycbc.waveform
import pycbc.vetoes
# Generate some noise with ... | 1,198 | 27.547619 | 78 | py |
pycbc | pycbc-master/examples/filter/pass.py | import matplotlib.pyplot as pp
import pycbc.noise
import pycbc.psd
import pycbc.filter
# Generate some noise with an advanced ligo psd
flow = 5.0
delta_f = 1.0 / 16
flen = int(2048 / delta_f) + 1
psd = pycbc.psd.aLIGOZeroDetHighPower(flen, delta_f, flow)
# Generate 1 seconds of noise at 4096 Hz
delta_t = 1.0 / 4096
... | 795 | 24.677419 | 65 | py |
pycbc | pycbc-master/examples/gw150914/audio.py | from pycbc.frame import read_frame
from pycbc.filter import highpass_fir, lowpass_fir
from pycbc.psd import welch, interpolate
from pycbc.types import TimeSeries
try:
from urllib.request import urlretrieve
except ImportError: # python < 3
from urllib import urlretrieve
# Read data and remove low frequency con... | 1,150 | 33.878788 | 83 | py |
pycbc | pycbc-master/examples/gw150914/gw150914_h1_snr.py | import matplotlib.pyplot as pp
from urllib.request import urlretrieve
from pycbc.frame import read_frame
from pycbc.filter import highpass_fir, matched_filter
from pycbc.waveform import get_fd_waveform
from pycbc.psd import welch, interpolate
# Read data and remove low frequency content
fname = 'H-H1_LOSC_4_V2-112625... | 1,097 | 31.294118 | 70 | py |
pycbc | pycbc-master/examples/gw150914/gw150914_shape.py | import matplotlib.pyplot as pp
from pycbc.filter import highpass_fir, lowpass_fir
from pycbc.psd import welch, interpolate
from pycbc.catalog import Merger
for ifo in ['H1', 'L1']:
# Read data and remove low frequency content
h1 = Merger("GW150914").strain(ifo)
h1 = highpass_fir(h1, 15, 8)
# Calculat... | 934 | 24.972222 | 73 | py |
pycbc | pycbc-master/examples/dataquality/hwinj.py | """This example shows how to determine when a CBC hardware injection is present
in the data from a detector.
"""
import matplotlib.pyplot as pp
from pycbc import dq
start_time = 1126051217
end_time = start_time + 10000000
# Get times that the Livingston detector has CBC injections into the data
segs = dq.query_flag... | 504 | 20.956522 | 79 | py |
pycbc | pycbc-master/examples/dataquality/on.py | """This example shows how to determine when a detector is active."""
import matplotlib.pyplot as pp
from pycbc import dq
from pycbc.results import ifo_color
start_time = 1126051217
end_time = start_time + 100000
# Get times that the Hanford detector has data
hsegs = dq.query_flag('H1', 'DATA', start_time, end_time)... | 709 | 24.357143 | 69 | py |
pycbc | pycbc-master/examples/live/make_singles_fits_file.py | """
This script will make a valid singles-fits file for use in the
pycbc_live CI tests. It doesn't have much physical meaning,
but will give broadly representative numbers for singles.
"""
import h5py
import numpy as np
f = h5py.File('single_trigger_fits.hdf','w')
# Some numbers to design the output
# These are loose... | 2,238 | 33.984375 | 78 | py |
pycbc | pycbc-master/examples/live/check_results.py | #!/usr/bin/env python
import sys
import argparse
import glob
import logging as log
import numpy as np
import h5py
import pycbc
from pycbc.io import FieldArray
from pycbc.io.ligolw import LIGOLWContentHandler
from ligo.lw.utils import load_filename as load_xml_doc
from ligo.lw import lsctables
from pycbc import convers... | 8,211 | 38.104762 | 88 | py |
pycbc | pycbc-master/examples/live/generate_injections.py | #!/usr/bin/env python
import sys
import numpy as np
from pycbc.io import FieldArray
from pycbc.inject import InjectionSet
dtype = [('mass1', float), ('mass2', float),
('spin1z', float), ('spin2z', float),
('tc', float), ('distance', float),
('ra', float), ('dec', float),
('approxi... | 1,508 | 34.093023 | 73 | py |
pycbc | pycbc-master/examples/search/check_job.py | import subprocess
import time
time.sleep(30)
while 1:
time.sleep(60)
subprocess.run(["condor_q", "-bet"])
subprocess.run(["pegasus-status", "submitdir/work/"])
out = subprocess.check_output(["pegasus-status", "submitdir/work/"])
out = str(out)
lines = out.split('\\n')
for i in range(len(line... | 1,136 | 26.731707 | 78 | py |
pycbc | pycbc-master/examples/workflow/generic/multilevel_subworkflow_data/simple.py | ../simple_subworkflow_data/simple.py | 36 | 36 | 36 | py |
pycbc | pycbc-master/examples/workflow/generic/simple_subworkflow_data/simple.py | """ A minimal pycbc workflow example """
import argparse
import pycbc
import pycbc.workflow as wf
import os
pycbc.init_logging(True)
parser = argparse.ArgumentParser(description=__doc__[1:])
parser.add_argument("--multilevel", action='store_true', default=False)
wf.add_workflow_command_line_group(parser)
wf.add_workf... | 1,914 | 28.015152 | 77 | py |
pycbc | pycbc-master/examples/workflow/dayhopecheck/dayhopecheck.py | #!/usr/bin/env python
# Copyright (C) 2013 Ian W. Harry
#
# This program is free software; you can redistribute it and/or modify it
# under the terms of the GNU General Public License as published by the
# Free Software Foundation; either version 3 of the License, or (at your
# option) any later version.
#
# This prog... | 7,198 | 40.373563 | 250 | py |
pycbc | pycbc-master/examples/workflow/data_checker/daily_test.py | #!/usr/bin/env python
# Copyright (C) 2013 Ian W. Harry
#
# This program is free software; you can redistribute it and/or modify it
# under the terms of the GNU General Public License as published by the
# Free Software Foundation; either version 3 of the License, or (at your
# option) any later version.
#
# This prog... | 6,801 | 30.059361 | 250 | py |
pycbc | pycbc-master/examples/workflow/data_checker/get_data_example.py | #!/usr/bin/env python
# Copyright (C) 2013 Ian W. Harry
#
# This program is free software; you can redistribute it and/or modify it
# under the terms of the GNU General Public License as published by the
# Free Software Foundation; either version 3 of the License, or (at your
# option) any later version.
#
# This prog... | 2,162 | 33.887097 | 88 | py |
pycbc | pycbc-master/examples/inference/list_parameters.py | from pycbc.waveform import parameters
# print base parameters for CBC waveform
print(parameters.fd_waveform_params + parameters.location_params + \
parameters.calibration_params)
| 183 | 35.8 | 68 | py |
pycbc | pycbc-master/examples/inference/lisa_smbhb_ldc/advanced_plot.py | import subprocess
import pickle
import numpy as np
from pycbc.conversions import q_from_mass1_mass2, mchirp_from_mass1_mass2
def spin_ldc2pycbc(mag, pol):
return mag*np.cos(pol)
def plt(index):
with open('./MBHB_params_v2_LISA_frame.pkl', 'rb') as f:
params_true_all = pickle.load(f)
p_index = i... | 2,428 | 36.369231 | 95 | py |
pycbc | pycbc-master/examples/waveform/what_waveform.py | from pycbc.waveform import td_approximants, fd_approximants
# List of td approximants that are available
print(td_approximants())
# List of fd approximants that are currently available
print(fd_approximants())
# Note that these functions only print what is available for your current
# processing context. If a wavefo... | 426 | 34.583333 | 77 | py |
pycbc | pycbc-master/examples/waveform/plot_waveform.py | import matplotlib.pyplot as pp
from pycbc.waveform import get_td_waveform
for apx in ['SEOBNRv4', 'IMRPhenomD']:
hp, hc = get_td_waveform(approximant=apx,
mass1=10,
mass2=10,
spin1z=0.9,
... | 498 | 25.263158 | 50 | py |
pycbc | pycbc-master/examples/waveform/plot_freq.py | import matplotlib.pyplot as pp
from pycbc import waveform
for phase_order in [2, 3, 4, 5, 6, 7]:
hp, hc = waveform.get_td_waveform(approximant='SpinTaylorT4',
mass1=10, mass2=10,
phase_order=phase_order,
delta_t=1.0... | 700 | 30.863636 | 67 | py |
pycbc | pycbc-master/examples/waveform/add_waveform.py | import numpy
import matplotlib.pyplot as pp
import pycbc.waveform
from pycbc.types import TimeSeries
def test_waveform(**args):
flow = args['f_lower'] # Required parameter
dt = args['delta_t'] # Required parameter
fpeak = args['fpeak'] # A new parameter for my model
t = numpy.arange(0, 10, dt)
... | 1,497 | 29.571429 | 77 | py |
pycbc | pycbc-master/examples/waveform/match_waveform.py | from pycbc.waveform import get_td_waveform
from pycbc.filter import match
from pycbc.psd import aLIGOZeroDetHighPower
f_low = 30
sample_rate = 4096
# Generate the two waveforms to compare
hp, hc = get_td_waveform(approximant="EOBNRv2",
mass1=10,
mass2=10,
... | 1,045 | 28.885714 | 69 | py |
pycbc | pycbc-master/examples/waveform/plot_detwaveform.py | import matplotlib.pyplot as pp
from pycbc.waveform import get_td_waveform
from pycbc.detector import Detector
apx = 'SEOBNRv4'
# NOTE: Inclination runs from 0 to pi, with poles at 0 and pi
# coa_phase runs from 0 to 2 pi.
hp, hc = get_td_waveform(approximant=apx,
mass1=10,
... | 1,500 | 32.355556 | 84 | py |
pycbc | pycbc-master/examples/waveform/plot_phase.py | import matplotlib.pyplot as pp
from pycbc import waveform
for apx in ['SEOBNRv4', 'TaylorT4', 'IMRPhenomB']:
hp, hc = waveform.get_td_waveform(approximant=apx,
mass1=10,
mass2=10,
delta_t=1.0/4096,
... | 657 | 28.909091 | 61 | py |
pycbc | pycbc-master/examples/waveform/plot_fd_td.py | """Plot a time domain and Fourier domain waveform together in the time domain.
Note that without special cleanup the Fourier domain waveform will exhibit
the Gibb's phenomenon. (http://en.wikipedia.org/wiki/Gibbs_phenomenon)
"""
import matplotlib.pyplot as pp
from pycbc import types, fft, waveform
# Get a time domai... | 997 | 31.193548 | 78 | py |
pycbc | pycbc-master/examples/inspiral/check_GW150914_detection.py | #!/usr/bin/env python
# Read a pycbc_inspiral HDF5 trigger file and check that it contains triggers
# compatible with GW150914
# 2016 Tito Dal Canton
import sys
import h5py
import numpy as np
gw150914_time = 1126259462.4
gw150914_snr = {'H1': 19.71, 'L1': 13.28}
gw150914_chi2r = {'H1': 1.05, 'L1': 0.45}
f = h5py.Fil... | 1,207 | 32.555556 | 77 | py |
pycbc | pycbc-master/examples/noise/frequency.py | import matplotlib.pyplot as pp
import pycbc.noise
import pycbc.psd
# The color of the noise matches a PSD which you provide
flow = 30.0
delta_f = 1.0 / 64
flen = int(2048 / delta_f) + 1
psd = pycbc.psd.aLIGOZeroDetHighPower(flen, delta_f, flow)
# Here the noise is generated directly in the frequency domain so it mat... | 668 | 28.086957 | 76 | py |
pycbc | pycbc-master/examples/noise/timeseries.py | import matplotlib.pyplot as pp
import pycbc.noise
import pycbc.psd
# The color of the noise matches a PSD which you provide
flow = 30.0
delta_f = 1.0 / 16
flen = int(2048 / delta_f) + 1
psd = pycbc.psd.aLIGOZeroDetHighPower(flen, delta_f, flow)
# Generate 32 seconds of noise at 4096 Hz
delta_t = 1.0 / 4096
tsamples ... | 488 | 22.285714 | 65 | py |
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