repo stringlengths 7 55 | path stringlengths 4 127 | func_name stringlengths 1 88 | original_string stringlengths 75 19.8k | language stringclasses 1
value | code stringlengths 75 19.8k | code_tokens list | docstring stringlengths 3 17.3k | docstring_tokens list | sha stringlengths 40 40 | url stringlengths 87 242 | partition stringclasses 1
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bxlab/bx-python | lib/bx/misc/readlengths.py | read_lengths_file | def read_lengths_file( name ):
"""
Returns a hash from sequence name to length.
"""
chrom_to_length = {}
f = file ( name, "rt" )
for line in f:
line = line.strip()
if line == '' or line[0] == '#': continue
try:
fields = line.split()
if len(fields)... | python | def read_lengths_file( name ):
"""
Returns a hash from sequence name to length.
"""
chrom_to_length = {}
f = file ( name, "rt" )
for line in f:
line = line.strip()
if line == '' or line[0] == '#': continue
try:
fields = line.split()
if len(fields)... | [
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bxlab/bx-python | lib/bx/wiggle.py | IntervalReader | def IntervalReader( f ):
"""
Iterator yielding chrom, start, end, strand, value.
Values are zero-based, half-open.
Regions which lack a score are ignored.
"""
current_chrom = None
current_pos = None
current_step = None
# always for wiggle data
strand = '+'
mode = "bed"
... | python | def IntervalReader( f ):
"""
Iterator yielding chrom, start, end, strand, value.
Values are zero-based, half-open.
Regions which lack a score are ignored.
"""
current_chrom = None
current_pos = None
current_step = None
# always for wiggle data
strand = '+'
mode = "bed"
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bxlab/bx-python | lib/bx/align/tools/fuse.py | fuse_list | def fuse_list( mafs ):
"""
Try to fuse a list of blocks by progressively fusing each adjacent pair.
"""
last = None
for m in mafs:
if last is None:
last = m
else:
fused = fuse( last, m )
if fused:
last = fused
else:
... | python | def fuse_list( mafs ):
"""
Try to fuse a list of blocks by progressively fusing each adjacent pair.
"""
last = None
for m in mafs:
if last is None:
last = m
else:
fused = fuse( last, m )
if fused:
last = fused
else:
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bxlab/bx-python | lib/bx_extras/pyparsing.py | ParserElement.setBreak | def setBreak(self,breakFlag = True):
"""Method to invoke the Python pdb debugger when this element is
about to be parsed. Set breakFlag to True to enable, False to
disable.
"""
if breakFlag:
_parseMethod = self._parse
def breaker(instring, loc, doAct... | python | def setBreak(self,breakFlag = True):
"""Method to invoke the Python pdb debugger when this element is
about to be parsed. Set breakFlag to True to enable, False to
disable.
"""
if breakFlag:
_parseMethod = self._parse
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bxlab/bx-python | lib/bx_extras/pyparsing.py | ParserElement.searchString | def searchString( self, instring, maxMatches=_MAX_INT ):
"""Another extension to scanString, simplifying the access to the tokens found
to match the given parse expression. May be called with optional
maxMatches argument, to clip searching after 'n' matches are found.
"""
... | python | def searchString( self, instring, maxMatches=_MAX_INT ):
"""Another extension to scanString, simplifying the access to the tokens found
to match the given parse expression. May be called with optional
maxMatches argument, to clip searching after 'n' matches are found.
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bxlab/bx-python | lib/bx/align/epo.py | Chain._strfactory | def _strfactory(cls, line):
"""factory class method for Chain
:param line: header of a chain (in .chain format)
"""
assert type(line) == str, "this is a factory from string"
line = line.rstrip().split()[1:] # the first component is the keyword "chain"
tup = [t[0](t[1])... | python | def _strfactory(cls, line):
"""factory class method for Chain
:param line: header of a chain (in .chain format)
"""
assert type(line) == str, "this is a factory from string"
line = line.rstrip().split()[1:] # the first component is the keyword "chain"
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bxlab/bx-python | lib/bx/align/epo.py | Chain.bedInterval | def bedInterval(self, who):
"return a BED6 entry, thus DOES coordinate conversion for minus strands"
if who == 't':
st, en = self.tStart, self.tEnd
if self.tStrand == '-':
st, en = self.tSize-en, self.tSize-st
return (self.tName, st, en, self.id, self... | python | def bedInterval(self, who):
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if who == 't':
st, en = self.tStart, self.tEnd
if self.tStrand == '-':
st, en = self.tSize-en, self.tSize-st
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bxlab/bx-python | lib/bx/align/epo.py | EPOitem._strfactory | def _strfactory(cls, line):
"""factory method for an EPOitem
:param line: a line of input"""
cmp = line.rstrip().split()
chrom = cmp[2]
if not chrom.startswith("chr"):
chrom = "chr%s" % chrom
instance = tuple.__new__(cls,
(cmp[0], cmp[1],
... | python | def _strfactory(cls, line):
"""factory method for an EPOitem
:param line: a line of input"""
cmp = line.rstrip().split()
chrom = cmp[2]
if not chrom.startswith("chr"):
chrom = "chr%s" % chrom
instance = tuple.__new__(cls,
(cmp[0], cmp[1],
... | [
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bxlab/bx-python | lib/bx/bitset_builders.py | binned_bitsets_proximity | def binned_bitsets_proximity( f, chrom_col=0, start_col=1, end_col=2, strand_col=5, upstream=0, downstream=0 ):
"""Read a file into a dictionary of bitsets"""
last_chrom = None
last_bitset = None
bitsets = dict()
for line in f:
if line.startswith("#"): continue
# print "input=%s" % ( ... | python | def binned_bitsets_proximity( f, chrom_col=0, start_col=1, end_col=2, strand_col=5, upstream=0, downstream=0 ):
"""Read a file into a dictionary of bitsets"""
last_chrom = None
last_bitset = None
bitsets = dict()
for line in f:
if line.startswith("#"): continue
# print "input=%s" % ( ... | [
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bxlab/bx-python | lib/bx/bitset_builders.py | binned_bitsets_from_list | def binned_bitsets_from_list( list=[] ):
"""Read a list into a dictionary of bitsets"""
last_chrom = None
last_bitset = None
bitsets = dict()
for l in list:
chrom = l[0]
if chrom != last_chrom:
if chrom not in bitsets:
bitsets[chrom] = BinnedBitSet(MAX)
... | python | def binned_bitsets_from_list( list=[] ):
"""Read a list into a dictionary of bitsets"""
last_chrom = None
last_bitset = None
bitsets = dict()
for l in list:
chrom = l[0]
if chrom != last_chrom:
if chrom not in bitsets:
bitsets[chrom] = BinnedBitSet(MAX)
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bxlab/bx-python | lib/bx/bitset_builders.py | binned_bitsets_by_chrom | def binned_bitsets_by_chrom( f, chrom, chrom_col=0, start_col=1, end_col=2):
"""Read a file by chrom name into a bitset"""
bitset = BinnedBitSet( MAX )
for line in f:
if line.startswith("#"): continue
fields = line.split()
if fields[chrom_col] == chrom:
start, end = int( ... | python | def binned_bitsets_by_chrom( f, chrom, chrom_col=0, start_col=1, end_col=2):
"""Read a file by chrom name into a bitset"""
bitset = BinnedBitSet( MAX )
for line in f:
if line.startswith("#"): continue
fields = line.split()
if fields[chrom_col] == chrom:
start, end = int( ... | [
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bxlab/bx-python | lib/bx_extras/fpconst.py | _double_as_bytes | def _double_as_bytes(dval):
"Use struct.unpack to decode a double precision float into eight bytes"
tmp = list(struct.unpack('8B',struct.pack('d', dval)))
if not _big_endian:
tmp.reverse()
return tmp | python | def _double_as_bytes(dval):
"Use struct.unpack to decode a double precision float into eight bytes"
tmp = list(struct.unpack('8B',struct.pack('d', dval)))
if not _big_endian:
tmp.reverse()
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bxlab/bx-python | lib/bx_extras/fpconst.py | _mantissa | def _mantissa(dval):
"""Extract the _mantissa bits from a double-precision floating
point value."""
bb = _double_as_bytes(dval)
mantissa = bb[1] & 0x0f << 48
mantissa += bb[2] << 40
mantissa += bb[3] << 32
mantissa += bb[4]
return mantissa | python | def _mantissa(dval):
"""Extract the _mantissa bits from a double-precision floating
point value."""
bb = _double_as_bytes(dval)
mantissa = bb[1] & 0x0f << 48
mantissa += bb[2] << 40
mantissa += bb[3] << 32
mantissa += bb[4]
return mantissa | [
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bxlab/bx-python | lib/bx_extras/fpconst.py | _zero_mantissa | def _zero_mantissa(dval):
"""Determine whether the mantissa bits of the given double are all
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bb = _double_as_bytes(dval)
return ((bb[1] & 0x0f) | reduce(operator.or_, bb[2:])) == 0 | python | def _zero_mantissa(dval):
"""Determine whether the mantissa bits of the given double are all
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bb = _double_as_bytes(dval)
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bxlab/bx-python | scripts/aggregate_scores_in_intervals.py | load_scores_wiggle | def load_scores_wiggle( fname ):
"""
Read a wiggle file and return a dict of BinnedArray objects keyed
by chromosome.
"""
scores_by_chrom = dict()
for chrom, pos, val in bx.wiggle.Reader( misc.open_compressed( fname ) ):
if chrom not in scores_by_chrom:
scores_by_chrom[chrom... | python | def load_scores_wiggle( fname ):
"""
Read a wiggle file and return a dict of BinnedArray objects keyed
by chromosome.
"""
scores_by_chrom = dict()
for chrom, pos, val in bx.wiggle.Reader( misc.open_compressed( fname ) ):
if chrom not in scores_by_chrom:
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bxlab/bx-python | lib/bx/interval_index_file.py | Index.new | def new( self, min, max ):
"""Create an empty index for intervals in the range min, max"""
# Ensure the range will fit given the shifting strategy
assert MIN <= min <= max <= MAX
self.min = min
self.max = max
# Determine offsets to use
self.offsets = offsets_for_m... | python | def new( self, min, max ):
"""Create an empty index for intervals in the range min, max"""
# Ensure the range will fit given the shifting strategy
assert MIN <= min <= max <= MAX
self.min = min
self.max = max
# Determine offsets to use
self.offsets = offsets_for_m... | [
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Move the file pointer to a particular offset.
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target_pos = offset
elif whence == 1:
target_pos = self.file_pos + offset
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"""
Move the file pointer to a particular offset.
"""
# Determine absolute target position
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elif whence == 1:
target_pos = self.file_pos + offset
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bxlab/bx-python | lib/bx_extras/lrucache.py | LRUCache.mtime | def mtime(self, key):
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if key not in self.__dict:
raise CacheKeyError(key)
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bxlab/bx-python | lib/bx/cookbook/attribute.py | class_space | def class_space(classlevel=3):
"returns the calling class' name and dictionary"
frame = sys._getframe(classlevel)
classname = frame.f_code.co_name
classdict = frame.f_locals
return classname, classdict | python | def class_space(classlevel=3):
"returns the calling class' name and dictionary"
frame = sys._getframe(classlevel)
classname = frame.f_code.co_name
classdict = frame.f_locals
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bxlab/bx-python | lib/bx/align/lav.py | Reader.build_alignment | def build_alignment(self,score,pieces):
"""converts a score and pieces to an alignment"""
# build text
self.open_seqs()
text1 = text2 = ""
end1 = end2 = None
for (start1,start2,length,pctId) in pieces:
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if (start1 == end1): # insertion in sequence 2
text1 += self.seq1_gap * ... | python | def build_alignment(self,score,pieces):
"""converts a score and pieces to an alignment"""
# build text
self.open_seqs()
text1 = text2 = ""
end1 = end2 = None
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bxlab/bx-python | lib/bx/intervals/operations/__init__.py | bits_clear_in_range | def bits_clear_in_range( bits, range_start, range_end ):
"""
Yield start,end tuples for each span of clear bits in [range_start,range_end)
"""
end = range_start
while 1:
start = bits.next_clear( end )
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"""
Yield start,end tuples for each span of clear bits in [range_start,range_end)
"""
end = range_start
while 1:
start = bits.next_clear( end )
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bxlab/bx-python | lib/bx/cookbook/progress_bar.py | iterprogress | def iterprogress( sized_iterable ):
"""
Iterate something printing progress bar to stdout
"""
pb = ProgressBar( 0, len( sized_iterable ) )
for i, value in enumerate( sized_iterable ):
yield value
pb.update_and_print( i, sys.stderr ) | python | def iterprogress( sized_iterable ):
"""
Iterate something printing progress bar to stdout
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bxlab/bx-python | lib/bx/misc/cdb.py | FileCDBDict.to_file | def to_file( Class, dict, file, is_little_endian=True ):
"""
For constructing a CDB structure in a file. Able to calculate size on
disk and write to a file
"""
io = BinaryFileWriter( file, is_little_endian=is_little_endian )
start_offset = io.tell()
# Header is of... | python | def to_file( Class, dict, file, is_little_endian=True ):
"""
For constructing a CDB structure in a file. Able to calculate size on
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"""
io = BinaryFileWriter( file, is_little_endian=is_little_endian )
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bxlab/bx-python | scripts/bed_complement.py | read_len | def read_len( f ):
"""Read a 'LEN' file and return a mapping from chromosome to length"""
mapping = dict()
for line in f:
fields = line.split()
mapping[ fields[0] ] = int( fields[1] )
return mapping | python | def read_len( f ):
"""Read a 'LEN' file and return a mapping from chromosome to length"""
mapping = dict()
for line in f:
fields = line.split()
mapping[ fields[0] ] = int( fields[1] )
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bxlab/bx-python | lib/bx/motif/logo/__init__.py | eps_logo | def eps_logo( matrix, base_width, height, colors=DNA_DEFAULT_COLORS ):
"""
Return an EPS document containing a sequence logo for matrix where each
bases is shown as a column of `base_width` points and the total logo
height is `height` points. If `colors` is provided it is a mapping from
characters t... | python | def eps_logo( matrix, base_width, height, colors=DNA_DEFAULT_COLORS ):
"""
Return an EPS document containing a sequence logo for matrix where each
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bxlab/bx-python | scripts/bnMapper.py | transform | def transform(elem, chain_CT_CQ, max_gap):
"""transform the coordinates of this elem into the other species.
elem intersects this chain's ginterval.
:return: a list of the type [(to_chr, start, end, elem[id]) ... ]"""
(chain, CT, CQ) = chain_CT_CQ
start, end = max(elem['start'], chain.tStart) - cha... | python | def transform(elem, chain_CT_CQ, max_gap):
"""transform the coordinates of this elem into the other species.
elem intersects this chain's ginterval.
:return: a list of the type [(to_chr, start, end, elem[id]) ... ]"""
(chain, CT, CQ) = chain_CT_CQ
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bxlab/bx-python | scripts/bnMapper.py | loadChains | def loadChains(path):
"name says it."
EPO = epo.Chain._parse_file(path, True)
## convert coordinates w.r.t the forward strand (into slices)
## compute cummulative intervals
for i in range( len(EPO) ):
ch, S, T, Q = EPO[i]
if ch.tStrand == '-':
ch = ch._replace(tEnd = ch.... | python | def loadChains(path):
"name says it."
EPO = epo.Chain._parse_file(path, True)
## convert coordinates w.r.t the forward strand (into slices)
## compute cummulative intervals
for i in range( len(EPO) ):
ch, S, T, Q = EPO[i]
if ch.tStrand == '-':
ch = ch._replace(tEnd = ch.... | [
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bxlab/bx-python | scripts/bnMapper.py | loadFeatures | def loadFeatures(path, opt):
"""
Load features. For BED, only BED4 columns are loaded.
For narrowPeak, all columns are loaded.
"""
log.info("loading from %s ..." % path)
data = []
if opt.in_format == "BED":
with open(path) as fd:
for line in fd:
c... | python | def loadFeatures(path, opt):
"""
Load features. For BED, only BED4 columns are loaded.
For narrowPeak, all columns are loaded.
"""
log.info("loading from %s ..." % path)
data = []
if opt.in_format == "BED":
with open(path) as fd:
for line in fd:
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bxlab/bx-python | scripts/bnMapper.py | GIntervalTree.add | def add(self, chrom, element):
"""insert an element. use this method as the IntervalTree one.
this will simply call the IntervalTree.add method on the right tree
:param chrom: chromosome
:param element: the argument of IntervalTree.insert_interval
:return: None
"""
... | python | def add(self, chrom, element):
"""insert an element. use this method as the IntervalTree one.
this will simply call the IntervalTree.add method on the right tree
:param chrom: chromosome
:param element: the argument of IntervalTree.insert_interval
:return: None
"""
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bxlab/bx-python | scripts/bnMapper.py | GIntervalTree.find | def find(self, chrom, start, end):
"""find the intersecting elements
:param chrom: chromosome
:param start: start
:param end: end
:return: a list of intersecting elements"""
tree = self._trees.get( chrom, None )
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:param password_hash: A 16-byte password hash
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"""
Generate the LM response given a 16-byte password hash and the
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jborean93/ntlm-auth | ntlm_auth/des.py | DES.encrypt | def encrypt(self, data, pad=True):
"""
DES encrypts the data based on the key it was initialised with.
:param data: The bytes string to encrypt
:param pad: Whether to right pad data with \x00 to a multiple of 8
:return: The encrypted bytes string
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"""
DES encrypts the data based on the key it was initialised with.
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jborean93/ntlm-auth | ntlm_auth/des.py | DES.decrypt | def decrypt(self, data):
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DES decrypts the data based on the key it was initialised with.
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datawire/quark | quarkc/compiler.py | Check.visit_Method | def visit_Method(self, method):
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Ensure method has the same signature matching method on parent interface.
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resolved_method = method.resolved.type
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Ensure method has the same signature matching method on parent interface.
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datawire/quark | quarkc/docmaker.py | get_doc | def get_doc(node):
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datawire/quark | quarkc/lib/quark_ws4py_fixup.py | WebSocketWSGIHandler.setup_environ | def setup_environ(self):
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chrisb2/pi_ina219 | ina219.py | INA219.configure | def configure(self, voltage_range=RANGE_32V, gain=GAIN_AUTO,
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chrisb2/pi_ina219 | ina219.py | INA219.wake | def wake(self):
""" Wake the INA219 from power down mode """
configuration = self._read_configuration()
self._configuration_register(configuration | 0x0007)
# 40us delay to recover from powerdown (p14 of spec)
time.sleep(0.00004) | python | def wake(self):
""" Wake the INA219 from power down mode """
configuration = self._read_configuration()
self._configuration_register(configuration | 0x0007)
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:param json_results: Should return JSON or raw content
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blacktop/virustotal-api | virus_total_apis/api.py | PublicApi.get_domain_report | def get_domain_report(self, this_domain, timeout=None):
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:param this_domain: a domain name.
:param timeout: The amount of time in seconds the request should wait before timing out.
:return: JSON response
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params = {'apikey': s... | python | def get_domain_report(self, this_domain, timeout=None):
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blacktop/virustotal-api | virus_total_apis/api.py | PrivateApi.get_upload_url | def get_upload_url(self, timeout=None):
""" Get a special URL for submitted files bigger than 32MB.
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:param timeout: The amou... | python | def get_upload_url(self, timeout=None):
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blacktop/virustotal-api | virus_total_apis/api.py | PrivateApi.file_search | def file_search(self, query, offset=None, timeout=None):
""" Search for samples.
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call "advanced reverse searches". Reverse searches take you from a file property to a list of files that
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blacktop/virustotal-api | virus_total_apis/api.py | PrivateApi.get_file_clusters | def get_file_clusters(self, this_date, timeout=None):
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blacktop/virustotal-api | virus_total_apis/api.py | PrivateApi.get_url_distribution | def get_url_distribution(self, after=None, reports='true', limit=1000, timeout=None):
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Allows you to retrieve a live feed of URLs submitted to VirusTotal, along with their scan reports. This
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blacktop/virustotal-api | virus_total_apis/api.py | PrivateApi.get_url_feed | def get_url_feed(self, package=None, timeout=None):
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blacktop/virustotal-api | virus_total_apis/api.py | IntelApi.get_intel_notifications_feed | def get_intel_notifications_feed(self, page=None, timeout=None):
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blacktop/virustotal-api | virus_total_apis/api.py | IntelApi.delete_intel_notifications | def delete_intel_notifications(self, ids, timeout=None):
""" Programmatically delete notifications via the Intel API.
:param ids: A list of IDs to delete from the notification feed.
:returns: The post response.
"""
if not isinstance(ids, list):
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localstack/localstack-python-client | localstack_client/session.py | Session.get_credentials | def get_credentials(self):
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fabric-bolt/fabric-bolt | fabric_bolt/projects/models.py | Project.web_hooks | def web_hooks(self, include_global=True):
"""Get all web hooks for this project. Includes global hooks."""
from fabric_bolt.web_hooks.models import Hook
ors = [Q(project=self)]
if include_global:
ors.append(Q(project=None))
hooks = Hook.objects.filter(reduce(operato... | python | def web_hooks(self, include_global=True):
"""Get all web hooks for this project. Includes global hooks."""
from fabric_bolt.web_hooks.models import Hook
ors = [Q(project=self)]
if include_global:
ors.append(Q(project=None))
hooks = Hook.objects.filter(reduce(operato... | [
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fabric-bolt/fabric-bolt | fabric_bolt/projects/models.py | Project.get_deployment_count | def get_deployment_count(self):
"""Utility function to get the number of deployments a given project has"""
ret = self.stage_set.annotate(num_deployments=Count('deployment')).aggregate(total_deployments=Sum('num_deployments'))
return ret['total_deployments'] | python | def get_deployment_count(self):
"""Utility function to get the number of deployments a given project has"""
ret = self.stage_set.annotate(num_deployments=Count('deployment')).aggregate(total_deployments=Sum('num_deployments'))
return ret['total_deployments'] | [
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fabric-bolt/fabric-bolt | fabric_bolt/projects/models.py | Stage.get_configurations | def get_configurations(self):
"""
Generates a dictionary that's made up of the configurations on the project.
Any configurations on a project that are duplicated on a stage, the stage configuration will take precedence.
"""
project_configurations_dictionary = {}
project_... | python | def get_configurations(self):
"""
Generates a dictionary that's made up of the configurations on the project.
Any configurations on a project that are duplicated on a stage, the stage configuration will take precedence.
"""
project_configurations_dictionary = {}
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fabric-bolt/fabric-bolt | fabric_bolt/projects/models.py | Configuration.get_absolute_url | def get_absolute_url(self):
"""Determine where I am coming from and where I am going"""
# Determine if this configuration is on a stage
if self.stage:
# Stage specific configurations go back to the stage view
url = reverse('projects_stage_view', args=(self.project.pk, se... | python | def get_absolute_url(self):
"""Determine where I am coming from and where I am going"""
# Determine if this configuration is on a stage
if self.stage:
# Stage specific configurations go back to the stage view
url = reverse('projects_stage_view', args=(self.project.pk, se... | [
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fabric-bolt/fabric-bolt | fabric_bolt/accounts/models.py | DeployUser.gravatar | def gravatar(self, size=20):
"""
Construct a gravatar image address for the user
"""
default = "mm"
gravatar_url = "//www.gravatar.com/avatar/" + hashlib.md5(self.email.lower()).hexdigest() + "?"
gravatar_url += urllib.urlencode({'d': default, 's': str(size)})
r... | python | def gravatar(self, size=20):
"""
Construct a gravatar image address for the user
"""
default = "mm"
gravatar_url = "//www.gravatar.com/avatar/" + hashlib.md5(self.email.lower()).hexdigest() + "?"
gravatar_url += urllib.urlencode({'d': default, 's': str(size)})
r... | [
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fabric-bolt/fabric-bolt | fabric_bolt/web_hooks/managers.py | HookManager.hooks | def hooks(self, project):
""" Look up the urls we need to post to"""
return self.get_queryset().filter(
Q(project=None) |
Q(project=project)
).distinct('url') | python | def hooks(self, project):
""" Look up the urls we need to post to"""
return self.get_queryset().filter(
Q(project=None) |
Q(project=project)
).distinct('url') | [
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fabric-bolt/fabric-bolt | fabric_bolt/web_hooks/receivers.py | web_hook_receiver | def web_hook_receiver(sender, **kwargs):
"""Generic receiver for the web hook firing piece."""
deployment = Deployment.objects.get(pk=kwargs.get('deployment_id'))
hooks = deployment.web_hooks
if not hooks:
return
for hook in hooks:
data = payload_generator(deployment)
d... | python | def web_hook_receiver(sender, **kwargs):
"""Generic receiver for the web hook firing piece."""
deployment = Deployment.objects.get(pk=kwargs.get('deployment_id'))
hooks = deployment.web_hooks
if not hooks:
return
for hook in hooks:
data = payload_generator(deployment)
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fabric-bolt/fabric-bolt | fabric_bolt/core/mixins/tables.py | PaginateTable.paginate | def paginate(self, klass=Paginator, per_page=None, page=1, *args, **kwargs):
"""
Paginates the table using a paginator and creates a ``page`` property
containing information for the current page.
:type klass: Paginator class
:param klass: a paginator class to paginate the... | python | def paginate(self, klass=Paginator, per_page=None, page=1, *args, **kwargs):
"""
Paginates the table using a paginator and creates a ``page`` property
containing information for the current page.
:type klass: Paginator class
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fabric-bolt/fabric-bolt | fabric_bolt/task_runners/base.py | BaseTaskRunnerBackend.get_fabric_tasks | def get_fabric_tasks(self, project):
"""
Generate a list of fabric tasks that are available
"""
cache_key = 'project_{}_fabfile_tasks'.format(project.pk)
cached_result = cache.get(cache_key)
if cached_result:
return cached_result
try:
fa... | python | def get_fabric_tasks(self, project):
"""
Generate a list of fabric tasks that are available
"""
cache_key = 'project_{}_fabfile_tasks'.format(project.pk)
cached_result = cache.get(cache_key)
if cached_result:
return cached_result
try:
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fabric-bolt/fabric-bolt | fabric_bolt/projects/views.py | ProjectCopy.get_initial | def get_initial(self):
"""
Returns the initial data to use for forms on this view.
"""
initial = super(ProjectCopy, self).get_initial()
if self.copy_object:
initial.update({'name': '%s copy' % self.copy_object.name,
'description': self.copy... | python | def get_initial(self):
"""
Returns the initial data to use for forms on this view.
"""
initial = super(ProjectCopy, self).get_initial()
if self.copy_object:
initial.update({'name': '%s copy' % self.copy_object.name,
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fabric-bolt/fabric-bolt | fabric_bolt/projects/views.py | ProjectConfigurationDelete.get_success_url | def get_success_url(self):
"""Get the url depending on what type of configuration I deleted."""
if self.stage_id:
url = reverse('projects_stage_view', args=(self.project_id, self.stage_id))
else:
url = reverse('projects_project_view', args=(self.project_id,))
re... | python | def get_success_url(self):
"""Get the url depending on what type of configuration I deleted."""
if self.stage_id:
url = reverse('projects_stage_view', args=(self.project_id, self.stage_id))
else:
url = reverse('projects_project_view', args=(self.project_id,))
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fabric-bolt/fabric-bolt | fabric_bolt/hosts/utils.py | create_ssh_config | def create_ssh_config(remote_user='root', name='Auto Generated SSH Key',
file_name='fabricbolt_private.key', email='deployments@fabricbolt.io', public_key_text=None,
private_key_text=None):
"""Create SSH Key"""
if not private_key_text and not public_key_text:
... | python | def create_ssh_config(remote_user='root', name='Auto Generated SSH Key',
file_name='fabricbolt_private.key', email='deployments@fabricbolt.io', public_key_text=None,
private_key_text=None):
"""Create SSH Key"""
if not private_key_text and not public_key_text:
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softvar/json2html | json2html/jsonconv.py | Json2Html.convert | def convert(self, json="", table_attributes='border="1"', clubbing=True, encode=False, escape=True):
"""
Convert JSON to HTML Table format
"""
# table attributes such as class, id, data-attr-*, etc.
# eg: table_attributes = 'class = "table table-bordered sortable"'
se... | python | def convert(self, json="", table_attributes='border="1"', clubbing=True, encode=False, escape=True):
"""
Convert JSON to HTML Table format
"""
# table attributes such as class, id, data-attr-*, etc.
# eg: table_attributes = 'class = "table table-bordered sortable"'
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softvar/json2html | json2html/jsonconv.py | Json2Html.column_headers_from_list_of_dicts | def column_headers_from_list_of_dicts(self, json_input):
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"""
This method is required to implement clubbing.
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softvar/json2html | json2html/jsonconv.py | Json2Html.convert_object | def convert_object(self, json_input):
"""
Iterate over the JSON object and process it
to generate the super awesome HTML Table format
"""
if not json_input:
return "" #avoid empty tables
converted_output = self.table_init_markup + "<tr>"
conver... | python | def convert_object(self, json_input):
"""
Iterate over the JSON object and process it
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"""
if not json_input:
return "" #avoid empty tables
converted_output = self.table_init_markup + "<tr>"
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philippelt/netatmo-api-python | lnetatmo.py | HomeData.personsAtHome | def personsAtHome(self, home=None):
"""
Return the list of known persons who are currently at home
"""
if not home: home = self.default_home
home_data = self.homeByName(home)
atHome = []
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#Only check known persons
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"""
Return the list of known persons who are currently at home
"""
if not home: home = self.default_home
home_data = self.homeByName(home)
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philippelt/netatmo-api-python | lnetatmo.py | HomeData.getProfileImage | def getProfileImage(self, name):
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key = sel... | python | def getProfileImage(self, name):
"""
Retrieve the face of a given person
"""
for p in self.persons:
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if name == self.persons[p]['pseudo']:
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philippelt/netatmo-api-python | lnetatmo.py | HomeData.updateEvent | def updateEvent(self, event=None, home=None):
"""
Update the list of event with the latest ones
"""
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if not event:
#If not event is provided we need to retrieve the oldest of the last event seen by each camera
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"""
Update the list of event with the latest ones
"""
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philippelt/netatmo-api-python | lnetatmo.py | HomeData.personSeenByCamera | def personSeenByCamera(self, name, home=None, camera=None):
"""
Return True if a specific person has been seen by a camera
"""
try:
cam_id = self.cameraByName(camera=camera, home=home)['id']
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"""
Return True if a specific person has been seen by a camera
"""
try:
cam_id = self.cameraByName(camera=camera, home=home)['id']
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philippelt/netatmo-api-python | lnetatmo.py | HomeData.someoneKnownSeen | def someoneKnownSeen(self, home=None, camera=None):
"""
Return True if someone known has been seen
"""
try:
cam_id = self.cameraByName(camera=camera, home=home)['id']
except TypeError:
logger.warning("personSeenByCamera: Camera name or home is unknown")
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"""
Return True if someone known has been seen
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try:
cam_id = self.cameraByName(camera=camera, home=home)['id']
except TypeError:
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philippelt/netatmo-api-python | lnetatmo.py | HomeData.motionDetected | def motionDetected(self, home=None, camera=None):
"""
Return True if movement has been detected
"""
try:
cam_id = self.cameraByName(camera=camera, home=home)['id']
except TypeError:
logger.warning("personSeenByCamera: Camera name or home is unknown")
... | python | def motionDetected(self, home=None, camera=None):
"""
Return True if movement has been detected
"""
try:
cam_id = self.cameraByName(camera=camera, home=home)['id']
except TypeError:
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fprimex/zdesk | zdesk/zdesk.py | batch | def batch(sequence, callback, size=100, **kwargs):
"""Helper to setup batch requests.
There are endpoints which support updating multiple resources at once,
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This function helps with splitting bigger requests into sequence of
smaller ones.
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There are endpoints which support updating multiple resources at once,
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v1k45/django-notify-x | notify/views.py | notification_redirect | def notification_redirect(request, ctx):
"""
Helper to handle HTTP response after an action is performed on notification
:param request: HTTP request context of the notification
:param ctx: context to be returned when a AJAX call is made.
:returns: Either JSON for AJAX or redirects to the calcula... | python | def notification_redirect(request, ctx):
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v1k45/django-notify-x | notify/views.py | mark | def mark(request):
"""
Handles marking of individual notifications as read or unread.
Takes ``notification id`` and mark ``action`` as POST data.
:param request: HTTP request context.
:returns: Response to mark action of supplied notification ID.
"""
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"""
Handles marking of individual notifications as read or unread.
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v1k45/django-notify-x | notify/views.py | mark_all | def mark_all(request):
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:return: Response to mark_all action.
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v1k45/django-notify-x | notify/views.py | delete | def delete(request):
"""
Deletes notification of supplied notification ID.
Depending on project settings, if ``NOTIFICATIONS_SOFT_DELETE``
is set to ``False``, the notifications will be deleted from DB.
If not, a soft delete will be performed.
By default, notifications are deleted softly.
... | python | def delete(request):
"""
Deletes notification of supplied notification ID.
Depending on project settings, if ``NOTIFICATIONS_SOFT_DELETE``
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If not, a soft delete will be performed.
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v1k45/django-notify-x | notify/views.py | notification_update | def notification_update(request):
"""
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Read more: http://stackoverflow.com/a/12855533/4726598
Required URL parameters: ``flag``.
Explanation:
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"""
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v1k45/django-notify-x | notify/views.py | read_and_redirect | def read_and_redirect(request, notification_id):
"""
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**IMPORTANT**: This is CSRF - unsafe method.
Only use it if its okay for you to mark notifications \
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"""
Marks the supplied notification as read and then redirects
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] | b4aa03039759126889666a59117e83dcd4cdb374 | https://github.com/v1k45/django-notify-x/blob/b4aa03039759126889666a59117e83dcd4cdb374/notify/views.py#L268-L296 | train |
mezz64/pyHik | pyhik/hikvision.py | HikCamera.get_motion_detection | def get_motion_detection(self):
"""Fetch current motion state from camera"""
url = ('%s/ISAPI/System/Video/inputs/'
'channels/1/motionDetection') % self.root_url
try:
response = self.hik_request.get(url, timeout=CONNECT_TIMEOUT)
except (requests.exceptions.Req... | python | def get_motion_detection(self):
"""Fetch current motion state from camera"""
url = ('%s/ISAPI/System/Video/inputs/'
'channels/1/motionDetection') % self.root_url
try:
response = self.hik_request.get(url, timeout=CONNECT_TIMEOUT)
except (requests.exceptions.Req... | [
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mezz64/pyHik | pyhik/hikvision.py | HikCamera._set_motion_detection | def _set_motion_detection(self, enable):
"""Set desired motion detection state on camera"""
url = ('%s/ISAPI/System/Video/inputs/'
'channels/1/motionDetection') % self.root_url
enabled = self._motion_detection_xml.find(self.element_query('enabled'))
if enabled is None:
... | python | def _set_motion_detection(self, enable):
"""Set desired motion detection state on camera"""
url = ('%s/ISAPI/System/Video/inputs/'
'channels/1/motionDetection') % self.root_url
enabled = self._motion_detection_xml.find(self.element_query('enabled'))
if enabled is None:
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mezz64/pyHik | pyhik/hikvision.py | HikCamera.add_update_callback | def add_update_callback(self, callback, sensor):
"""Register as callback for when a matching device sensor changes."""
self._updateCallbacks.append([callback, sensor])
_LOGGING.debug('Added update callback to %s on %s', callback, sensor) | python | def add_update_callback(self, callback, sensor):
"""Register as callback for when a matching device sensor changes."""
self._updateCallbacks.append([callback, sensor])
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mezz64/pyHik | pyhik/hikvision.py | HikCamera.initialize | def initialize(self):
"""Initialize deviceInfo and available events."""
device_info = self.get_device_info()
if device_info is None:
self.name = None
self.cam_id = None
self.event_states = None
return
for key in device_info:
i... | python | def initialize(self):
"""Initialize deviceInfo and available events."""
device_info = self.get_device_info()
if device_info is None:
self.name = None
self.cam_id = None
self.event_states = None
return
for key in device_info:
i... | [
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mezz64/pyHik | pyhik/hikvision.py | HikCamera.get_event_triggers | def get_event_triggers(self):
"""
Returns dict of supported events.
Key = Event Type
List = Channels that have that event activated
"""
events = {}
nvrflag = False
event_xml = []
url = '%s/ISAPI/Event/triggers' % self.root_url
try:
... | python | def get_event_triggers(self):
"""
Returns dict of supported events.
Key = Event Type
List = Channels that have that event activated
"""
events = {}
nvrflag = False
event_xml = []
url = '%s/ISAPI/Event/triggers' % self.root_url
try:
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mezz64/pyHik | pyhik/hikvision.py | HikCamera.get_device_info | def get_device_info(self):
"""Parse deviceInfo into dictionary."""
device_info = {}
url = '%s/ISAPI/System/deviceInfo' % self.root_url
using_digest = False
try:
response = self.hik_request.get(url, timeout=CONNECT_TIMEOUT)
if response.status_code == reque... | python | def get_device_info(self):
"""Parse deviceInfo into dictionary."""
device_info = {}
url = '%s/ISAPI/System/deviceInfo' % self.root_url
using_digest = False
try:
response = self.hik_request.get(url, timeout=CONNECT_TIMEOUT)
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mezz64/pyHik | pyhik/hikvision.py | HikCamera.watchdog_handler | def watchdog_handler(self):
"""Take care of threads if wachdog expires."""
_LOGGING.debug('%s Watchdog expired. Resetting connection.', self.name)
self.watchdog.stop()
self.reset_thrd.set() | python | def watchdog_handler(self):
"""Take care of threads if wachdog expires."""
_LOGGING.debug('%s Watchdog expired. Resetting connection.', self.name)
self.watchdog.stop()
self.reset_thrd.set() | [
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mezz64/pyHik | pyhik/hikvision.py | HikCamera.disconnect | def disconnect(self):
"""Disconnect from event stream."""
_LOGGING.debug('Disconnecting from stream: %s', self.name)
self.kill_thrd.set()
self.thrd.join()
_LOGGING.debug('Event stream thread for %s is stopped', self.name)
self.kill_thrd.clear() | python | def disconnect(self):
"""Disconnect from event stream."""
_LOGGING.debug('Disconnecting from stream: %s', self.name)
self.kill_thrd.set()
self.thrd.join()
_LOGGING.debug('Event stream thread for %s is stopped', self.name)
self.kill_thrd.clear() | [
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mezz64/pyHik | pyhik/hikvision.py | HikCamera.alert_stream | def alert_stream(self, reset_event, kill_event):
"""Open event stream."""
_LOGGING.debug('Stream Thread Started: %s, %s', self.name, self.cam_id)
start_event = False
parse_string = ""
fail_count = 0
url = '%s/ISAPI/Event/notification/alertStream' % self.root_url
... | python | def alert_stream(self, reset_event, kill_event):
"""Open event stream."""
_LOGGING.debug('Stream Thread Started: %s, %s', self.name, self.cam_id)
start_event = False
parse_string = ""
fail_count = 0
url = '%s/ISAPI/Event/notification/alertStream' % self.root_url
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] | 1e7afca926e2b045257a43cbf8b1236a435493c2 | https://github.com/mezz64/pyHik/blob/1e7afca926e2b045257a43cbf8b1236a435493c2/pyhik/hikvision.py#L449-L531 | train |
mezz64/pyHik | pyhik/hikvision.py | HikCamera.process_stream | def process_stream(self, tree):
"""Process incoming event stream packets."""
try:
etype = SENSOR_MAP[tree.find(
self.element_query('eventType')).text.lower()]
estate = tree.find(
self.element_query('eventState')).text
echid = tree.find(... | python | def process_stream(self, tree):
"""Process incoming event stream packets."""
try:
etype = SENSOR_MAP[tree.find(
self.element_query('eventType')).text.lower()]
estate = tree.find(
self.element_query('eventState')).text
echid = tree.find(... | [
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mezz64/pyHik | pyhik/hikvision.py | HikCamera.update_stale | def update_stale(self):
"""Update stale active statuses"""
# Some events don't post an inactive XML, only active.
# If we don't get an active update for 5 seconds we can
# assume the event is no longer active and update accordingly.
for etype, echannels in self.event_states.items... | python | def update_stale(self):
"""Update stale active statuses"""
# Some events don't post an inactive XML, only active.
# If we don't get an active update for 5 seconds we can
# assume the event is no longer active and update accordingly.
for etype, echannels in self.event_states.items... | [
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