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minrk/findspark | findspark.py | _add_to_submit_args | def _add_to_submit_args(s):
"""Adds string s to the PYSPARK_SUBMIT_ARGS env var"""
new_args = os.environ.get("PYSPARK_SUBMIT_ARGS", "") + (" %s" % s)
os.environ["PYSPARK_SUBMIT_ARGS"] = new_args
return new_args | python | def _add_to_submit_args(s):
"""Adds string s to the PYSPARK_SUBMIT_ARGS env var"""
new_args = os.environ.get("PYSPARK_SUBMIT_ARGS", "") + (" %s" % s)
os.environ["PYSPARK_SUBMIT_ARGS"] = new_args
return new_args | [
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minrk/findspark | findspark.py | add_packages | def add_packages(packages):
"""Add external packages to the pyspark interpreter.
Set the PYSPARK_SUBMIT_ARGS properly.
Parameters
----------
packages: list of package names in string format
"""
#if the parameter is a string, convert to a single element list
if isinstance(packages,str)... | python | def add_packages(packages):
"""Add external packages to the pyspark interpreter.
Set the PYSPARK_SUBMIT_ARGS properly.
Parameters
----------
packages: list of package names in string format
"""
#if the parameter is a string, convert to a single element list
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minrk/findspark | findspark.py | add_jars | def add_jars(jars):
"""Add external jars to the pyspark interpreter.
Set the PYSPARK_SUBMIT_ARGS properly.
Parameters
----------
jars: list of path to jars in string format
"""
#if the parameter is a string, convert to a single element list
if isinstance(jars,str):
jars = [jar... | python | def add_jars(jars):
"""Add external jars to the pyspark interpreter.
Set the PYSPARK_SUBMIT_ARGS properly.
Parameters
----------
jars: list of path to jars in string format
"""
#if the parameter is a string, convert to a single element list
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sdispater/cleo | cleo/parser.py | Parser.parse | def parse(cls, expression):
"""
Parse the given console command definition into a dict.
:param expression: The expression to parse
:type expression: str
:rtype: dict
"""
parsed = {"name": None, "arguments": [], "options": []}
if not expression.strip():
... | python | def parse(cls, expression):
"""
Parse the given console command definition into a dict.
:param expression: The expression to parse
:type expression: str
:rtype: dict
"""
parsed = {"name": None, "arguments": [], "options": []}
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sdispater/cleo | cleo/parser.py | Parser._parameters | def _parameters(cls, tokens):
"""
Extract all of the parameters from the tokens.
:param tokens: The tokens to extract the parameters from
:type tokens: list
:rtype: dict
"""
arguments = []
options = []
for token in tokens:
if not tok... | python | def _parameters(cls, tokens):
"""
Extract all of the parameters from the tokens.
:param tokens: The tokens to extract the parameters from
:type tokens: list
:rtype: dict
"""
arguments = []
options = []
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sdispater/cleo | cleo/parser.py | Parser._parse_argument | def _parse_argument(cls, token):
"""
Parse an argument expression.
:param token: The argument expression
:type token: str
:rtype: InputArgument
"""
description = ""
validator = None
if " : " in token:
token, description = tuple(token... | python | def _parse_argument(cls, token):
"""
Parse an argument expression.
:param token: The argument expression
:type token: str
:rtype: InputArgument
"""
description = ""
validator = None
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sdispater/cleo | cleo/parser.py | Parser._parse_option | def _parse_option(cls, token):
"""
Parse an option expression.
:param token: The option expression
:type token: str
:rtype: InputOption
"""
description = ""
validator = None
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"""
Parse an option expression.
:param token: The option expression
:type token: str
:rtype: InputOption
"""
description = ""
validator = None
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sdispater/cleo | cleo/application.py | Application.add | def add(self, command): # type: (BaseCommand) -> Application
"""
Adds a command object.
"""
self.add_command(command.config)
command.set_application(self)
return self | python | def add(self, command): # type: (BaseCommand) -> Application
"""
Adds a command object.
"""
self.add_command(command.config)
command.set_application(self)
return self | [
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sdispater/cleo | cleo/commands/command.py | Command._configure_using_fluent_definition | def _configure_using_fluent_definition(self):
"""
Configure the console command using a fluent definition.
"""
definition = Parser.parse(self.signature)
self._config.set_name(definition["name"])
for name, flags, description, default in definition["arguments"]:
... | python | def _configure_using_fluent_definition(self):
"""
Configure the console command using a fluent definition.
"""
definition = Parser.parse(self.signature)
self._config.set_name(definition["name"])
for name, flags, description, default in definition["arguments"]:
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sdispater/cleo | cleo/commands/command.py | Command.argument | def argument(self, key=None):
"""
Get the value of a command argument.
"""
if key is None:
return self._args.arguments()
return self._args.argument(key) | python | def argument(self, key=None):
"""
Get the value of a command argument.
"""
if key is None:
return self._args.arguments()
return self._args.argument(key) | [
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sdispater/cleo | cleo/commands/command.py | Command.option | def option(self, key=None):
"""
Get the value of a command option.
"""
if key is None:
return self._args.options()
return self._args.option(key) | python | def option(self, key=None):
"""
Get the value of a command option.
"""
if key is None:
return self._args.options()
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sdispater/cleo | cleo/commands/command.py | Command.confirm | def confirm(self, question, default=False, true_answer_regex="(?i)^y"):
"""
Confirm a question with the user.
"""
return self._io.confirm(question, default, true_answer_regex) | python | def confirm(self, question, default=False, true_answer_regex="(?i)^y"):
"""
Confirm a question with the user.
"""
return self._io.confirm(question, default, true_answer_regex) | [
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sdispater/cleo | cleo/commands/command.py | Command.ask | def ask(self, question, default=None):
"""
Prompt the user for input.
"""
if isinstance(question, Question):
return self._io.ask_question(question)
return self._io.ask(question, default) | python | def ask(self, question, default=None):
"""
Prompt the user for input.
"""
if isinstance(question, Question):
return self._io.ask_question(question)
return self._io.ask(question, default) | [
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sdispater/cleo | cleo/commands/command.py | Command.choice | def choice(self, question, choices, default=None, attempts=None, multiple=False):
"""
Give the user a single choice from an list of answers.
"""
question = ChoiceQuestion(question, choices, default)
question.set_max_attempts(attempts)
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... | python | def choice(self, question, choices, default=None, attempts=None, multiple=False):
"""
Give the user a single choice from an list of answers.
"""
question = ChoiceQuestion(question, choices, default)
question.set_max_attempts(attempts)
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sdispater/cleo | cleo/commands/command.py | Command.create_question | def create_question(self, question, type=None, **kwargs):
"""
Returns a Question of specified type.
"""
if not type:
return Question(question, **kwargs)
if type == "choice":
return ChoiceQuestion(question, **kwargs)
if type == "confirmation":
... | python | def create_question(self, question, type=None, **kwargs):
"""
Returns a Question of specified type.
"""
if not type:
return Question(question, **kwargs)
if type == "choice":
return ChoiceQuestion(question, **kwargs)
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sdispater/cleo | cleo/commands/command.py | Command.table | def table(self, header=None, rows=None, style=None):
"""
Return a Table instance.
"""
if style is not None:
style = self.TABLE_STYLES[style]
table = Table(style)
if header:
table.set_header_row(header)
if rows:
table.set_rows... | python | def table(self, header=None, rows=None, style=None):
"""
Return a Table instance.
"""
if style is not None:
style = self.TABLE_STYLES[style]
table = Table(style)
if header:
table.set_header_row(header)
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sdispater/cleo | cleo/commands/command.py | Command.render_table | def render_table(self, headers, rows, style=None):
"""
Format input to textual table.
"""
table = self.table(headers, rows, style)
table.render(self._io) | python | def render_table(self, headers, rows, style=None):
"""
Format input to textual table.
"""
table = self.table(headers, rows, style)
table.render(self._io) | [
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sdispater/cleo | cleo/commands/command.py | Command.line | def line(self, text, style=None, verbosity=None):
"""
Write a string as information output.
"""
if style:
styled = "<%s>%s</>" % (style, text)
else:
styled = text
self._io.write_line(styled, verbosity) | python | def line(self, text, style=None, verbosity=None):
"""
Write a string as information output.
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sdispater/cleo | cleo/commands/command.py | Command.line_error | def line_error(self, text, style=None, verbosity=None):
"""
Write a string as information output to stderr.
"""
if style:
styled = "<%s>%s</>" % (style, text)
else:
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"""
Write a string as information output to stderr.
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sdispater/cleo | cleo/commands/command.py | Command.progress_indicator | def progress_indicator(self, fmt=None, interval=100, values=None):
"""
Creates a new progress indicator.
"""
return ProgressIndicator(self.io, fmt, interval, values) | python | def progress_indicator(self, fmt=None, interval=100, values=None):
"""
Creates a new progress indicator.
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sdispater/cleo | cleo/commands/command.py | Command.spin | def spin(self, start_message, end_message, fmt=None, interval=100, values=None):
"""
Automatically spin a progress indicator.
"""
spinner = ProgressIndicator(self.io, fmt, interval, values)
return spinner.auto(start_message, end_message) | python | def spin(self, start_message, end_message, fmt=None, interval=100, values=None):
"""
Automatically spin a progress indicator.
"""
spinner = ProgressIndicator(self.io, fmt, interval, values)
return spinner.auto(start_message, end_message) | [
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sdispater/cleo | cleo/commands/command.py | Command.add_style | def add_style(self, name, fg=None, bg=None, options=None):
"""
Adds a new style
"""
style = Style(name)
if fg is not None:
style.fg(fg)
if bg is not None:
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... | python | def add_style(self, name, fg=None, bg=None, options=None):
"""
Adds a new style
"""
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sdispater/cleo | cleo/commands/command.py | Command.overwrite | def overwrite(self, text, size=None):
"""
Overwrites the current line.
It will not add a new line so use line('')
if necessary.
"""
self._io.overwrite(text, size=size) | python | def overwrite(self, text, size=None):
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Overwrites the current line.
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"""
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Mergifyio/git-pull-request | git_pull_request/__init__.py | get_github_hostname_user_repo_from_url | def get_github_hostname_user_repo_from_url(url):
"""Return hostname, user and repository to fork from.
:param url: The URL to parse
:return: hostname, user, repository
"""
parsed = parse.urlparse(url)
if parsed.netloc == '':
# Probably ssh
host, sep, path = parsed.path.partition... | python | def get_github_hostname_user_repo_from_url(url):
"""Return hostname, user and repository to fork from.
:param url: The URL to parse
:return: hostname, user, repository
"""
parsed = parse.urlparse(url)
if parsed.netloc == '':
# Probably ssh
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Mergifyio/git-pull-request | git_pull_request/__init__.py | git_get_title_and_message | def git_get_title_and_message(begin, end):
"""Get title and message summary for patches between 2 commits.
:param begin: first commit to look at
:param end: last commit to look at
:return: number of commits, title, message
"""
titles = git_get_log_titles(begin, end)
title = "Pull request fo... | python | def git_get_title_and_message(begin, end):
"""Get title and message summary for patches between 2 commits.
:param begin: first commit to look at
:param end: last commit to look at
:return: number of commits, title, message
"""
titles = git_get_log_titles(begin, end)
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zhebrak/raftos | raftos/state.py | validate_commit_index | def validate_commit_index(func):
"""Apply to State Machine everything up to commit index"""
@functools.wraps(func)
def wrapped(self, *args, **kwargs):
for not_applied in range(self.log.last_applied + 1, self.log.commit_index + 1):
self.state_machine.apply(self.log[not_applied]['command'... | python | def validate_commit_index(func):
"""Apply to State Machine everything up to commit index"""
@functools.wraps(func)
def wrapped(self, *args, **kwargs):
for not_applied in range(self.log.last_applied + 1, self.log.commit_index + 1):
self.state_machine.apply(self.log[not_applied]['command'... | [
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zhebrak/raftos | raftos/state.py | Leader.execute_command | async def execute_command(self, command):
"""Write to log & send AppendEntries RPC"""
self.apply_future = asyncio.Future(loop=self.loop)
entry = self.log.write(self.storage.term, command)
asyncio.ensure_future(self.append_entries(), loop=self.loop)
await self.apply_future | python | async def execute_command(self, command):
"""Write to log & send AppendEntries RPC"""
self.apply_future = asyncio.Future(loop=self.loop)
entry = self.log.write(self.storage.term, command)
asyncio.ensure_future(self.append_entries(), loop=self.loop)
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zhebrak/raftos | raftos/state.py | Candidate.start | def start(self):
"""Increment current term, vote for herself & send vote requests"""
self.storage.update({
'term': self.storage.term + 1,
'voted_for': self.id
})
self.vote_count = 1
self.request_vote()
self.election_timer.start() | python | def start(self):
"""Increment current term, vote for herself & send vote requests"""
self.storage.update({
'term': self.storage.term + 1,
'voted_for': self.id
})
self.vote_count = 1
self.request_vote()
self.election_timer.start() | [
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zhebrak/raftos | raftos/state.py | Candidate.on_receive_request_vote_response | def on_receive_request_vote_response(self, data):
"""Receives response for vote request.
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"""
if data.get('vote_granted'):
self.vote_count += 1
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"""Receives response for vote request.
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"""
if data.get('vote_granted'):
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zhebrak/raftos | raftos/state.py | Follower.init_storage | def init_storage(self):
"""Set current term to zero upon initialization & voted_for to None"""
if not self.storage.exists('term'):
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'term': 0,
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self.storage.update({
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"""Set current term to zero upon initialization & voted_for to None"""
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'term': 0,
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zhebrak/raftos | raftos/state.py | State.wait_for_election_success | async def wait_for_election_success(cls):
"""Await this function if your cluster must have a leader"""
if cls.leader is None:
cls.leader_future = asyncio.Future(loop=cls.loop)
await cls.leader_future | python | async def wait_for_election_success(cls):
"""Await this function if your cluster must have a leader"""
if cls.leader is None:
cls.leader_future = asyncio.Future(loop=cls.loop)
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zhebrak/raftos | raftos/state.py | State.wait_until_leader | async def wait_until_leader(cls, node_id):
"""Await this function if you want to do nothing until node_id becomes a leader"""
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raise ValueError('Node id can not be None!')
if cls.get_leader() != node_id:
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c... | python | async def wait_until_leader(cls, node_id):
"""Await this function if you want to do nothing until node_id becomes a leader"""
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raise ValueError('Node id can not be None!')
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datajoint/datajoint-python | datajoint/declare.py | declare | def declare(full_table_name, definition, context):
"""
Parse declaration and create new SQL table accordingly.
:param full_table_name: full name of the table
:param definition: DataJoint table definition
:param context: dictionary of objects that might be referred to in the table.
"""
tabl... | python | def declare(full_table_name, definition, context):
"""
Parse declaration and create new SQL table accordingly.
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:param definition: DataJoint table definition
:param context: dictionary of objects that might be referred to in the table.
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datajoint/datajoint-python | datajoint/schema.py | create_virtual_module | def create_virtual_module(module_name, schema_name, create_schema=False, create_tables=False, connection=None):
"""
Creates a python module with the given name from the name of a schema on the server and
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"""
Creates a python module with the given name from the name of a schema on the server and
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datajoint/datajoint-python | datajoint/schema.py | Schema.drop | def drop(self, force=False):
"""
Drop the associated schema if it exists
"""
if not self.exists:
logger.info("Schema named `{database}` does not exist. Doing nothing.".format(database=self.database))
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... | python | def drop(self, force=False):
"""
Drop the associated schema if it exists
"""
if not self.exists:
logger.info("Schema named `{database}` does not exist. Doing nothing.".format(database=self.database))
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datajoint/datajoint-python | datajoint/schema.py | Schema.process_relation_class | def process_relation_class(self, relation_class, context, assert_declared=False):
"""
assign schema properties to the relation class and declare the table
"""
relation_class.database = self.database
relation_class._connection = self.connection
relation_class._heading = He... | python | def process_relation_class(self, relation_class, context, assert_declared=False):
"""
assign schema properties to the relation class and declare the table
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relation_class.database = self.database
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datajoint/datajoint-python | datajoint/table.py | Table.declare | def declare(self, context=None):
"""
Use self.definition to declare the table in the schema.
"""
try:
sql, uses_external = declare(self.full_table_name, self.definition, context)
if uses_external:
sql = sql.format(external_table=self.external_table... | python | def declare(self, context=None):
"""
Use self.definition to declare the table in the schema.
"""
try:
sql, uses_external = declare(self.full_table_name, self.definition, context)
if uses_external:
sql = sql.format(external_table=self.external_table... | [
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datajoint/datajoint-python | datajoint/table.py | Table.delete_quick | def delete_quick(self, get_count=False):
"""
Deletes the table without cascading and without user prompt.
If this table has populated dependent tables, this will fail.
"""
query = 'DELETE FROM ' + self.full_table_name + self.where_clause
self.connection.query(query)
... | python | def delete_quick(self, get_count=False):
"""
Deletes the table without cascading and without user prompt.
If this table has populated dependent tables, this will fail.
"""
query = 'DELETE FROM ' + self.full_table_name + self.where_clause
self.connection.query(query)
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datajoint/datajoint-python | datajoint/table.py | Table._update | def _update(self, attrname, value=None):
"""
Updates a field in an existing tuple. This is not a datajoyous operation and should not be used
routinely. Relational database maintain referential integrity on the level of a tuple. Therefore,
the UPDATE operator can violate refer... | python | def _update(self, attrname, value=None):
"""
Updates a field in an existing tuple. This is not a datajoyous operation and should not be used
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datajoint/datajoint-python | datajoint/expression.py | QueryExpression.where_clause | def where_clause(self):
"""
convert self.restriction to the SQL WHERE clause
"""
cond = self._make_condition(self.restriction)
return '' if cond is True else ' WHERE %s' % cond | python | def where_clause(self):
"""
convert self.restriction to the SQL WHERE clause
"""
cond = self._make_condition(self.restriction)
return '' if cond is True else ' WHERE %s' % cond | [
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datajoint/datajoint-python | datajoint/expression.py | QueryExpression.preview | def preview(self, limit=None, width=None):
"""
returns a preview of the contents of the query.
"""
heading = self.heading
rel = self.proj(*heading.non_blobs)
if limit is None:
limit = config['display.limit']
if width is None:
width = config... | python | def preview(self, limit=None, width=None):
"""
returns a preview of the contents of the query.
"""
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datajoint/datajoint-python | datajoint/expression.py | Join.make_argument_subquery | def make_argument_subquery(arg):
"""
Decide when a Join argument needs to be wrapped in a subquery
"""
return Subquery.create(arg) if isinstance(arg, (GroupBy, Projection)) or arg.restriction else arg | python | def make_argument_subquery(arg):
"""
Decide when a Join argument needs to be wrapped in a subquery
"""
return Subquery.create(arg) if isinstance(arg, (GroupBy, Projection)) or arg.restriction else arg | [
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datajoint/datajoint-python | datajoint/expression.py | Projection._need_subquery | def _need_subquery(arg, attributes, named_attributes):
"""
Decide whether the projection argument needs to be wrapped in a subquery
"""
if arg.heading.expressions or arg.distinct: # argument has any renamed (computed) attributes
return True
restricting_attributes = a... | python | def _need_subquery(arg, attributes, named_attributes):
"""
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"""
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datajoint/datajoint-python | datajoint/expression.py | Subquery.create | def create(cls, arg):
"""
construct a subquery from arg
"""
obj = cls()
obj._connection = arg.connection
obj._heading = arg.heading.make_subquery_heading()
obj._arg = arg
return obj | python | def create(cls, arg):
"""
construct a subquery from arg
"""
obj = cls()
obj._connection = arg.connection
obj._heading = arg.heading.make_subquery_heading()
obj._arg = arg
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datajoint/datajoint-python | datajoint/utils.py | user_choice | def user_choice(prompt, choices=("yes", "no"), default=None):
"""
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:param prompt: Information to display to the user.
:param choices: an iterable of possible choices.
:param default: default choice
:return: the user's... | python | def user_choice(prompt, choices=("yes", "no"), default=None):
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datajoint/datajoint-python | datajoint/fetch.py | to_dicts | def to_dicts(recarray):
"""convert record array to a dictionaries"""
for rec in recarray:
yield dict(zip(recarray.dtype.names, rec.tolist())) | python | def to_dicts(recarray):
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datajoint/datajoint-python | datajoint/fetch.py | Fetch.keys | def keys(self, **kwargs):
"""
DEPRECATED
Iterator that returns primary keys as a sequence of dicts.
"""
warnings.warn('Use of `rel.fetch.keys()` notation is deprecated. '
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"""
DEPRECATED
Iterator that returns primary keys as a sequence of dicts.
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datajoint/datajoint-python | datajoint/hash.py | key_hash | def key_hash(key):
"""
32-byte hash used for lookup of primary keys of jobs
"""
hashed = hashlib.md5()
for k, v in sorted(key.items()):
hashed.update(str(v).encode())
return hashed.hexdigest() | python | def key_hash(key):
"""
32-byte hash used for lookup of primary keys of jobs
"""
hashed = hashlib.md5()
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datajoint/datajoint-python | datajoint/connection.py | conn | def conn(host=None, user=None, password=None, init_fun=None, reset=False):
"""
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"""
Returns a persistent connection object to be shared by multiple modules.
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datajoint/datajoint-python | datajoint/connection.py | Connection.connect | def connect(self):
"""
Connects to the database server.
"""
with warnings.catch_warnings():
warnings.filterwarnings('ignore', '.*deprecated.*')
self._conn = client.connect(
init_command=self.init_fun,
sql_mode="NO_ZERO_DATE,NO_ZERO_... | python | def connect(self):
"""
Connects to the database server.
"""
with warnings.catch_warnings():
warnings.filterwarnings('ignore', '.*deprecated.*')
self._conn = client.connect(
init_command=self.init_fun,
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datajoint/datajoint-python | datajoint/connection.py | Connection.start_transaction | def start_transaction(self):
"""
Starts a transaction error.
:raise DataJointError: if there is an ongoing transaction.
"""
if self.in_transaction:
raise DataJointError("Nested connections are not supported.")
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"""
Starts a transaction error.
:raise DataJointError: if there is an ongoing transaction.
"""
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raise DataJointError("Nested connections are not supported.")
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datajoint/datajoint-python | datajoint/settings.py | Config.save_global | def save_global(self, verbose=False):
"""
saves the settings in the global config file
"""
self.save(os.path.expanduser(os.path.join('~', GLOBALCONFIG)), verbose) | python | def save_global(self, verbose=False):
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saves the settings in the global config file
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datajoint/datajoint-python | datajoint/heading.py | Attribute.todict | def todict(self):
"""Convert namedtuple to dict."""
return OrderedDict((name, self[i]) for i, name in enumerate(self._fields)) | python | def todict(self):
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datajoint/datajoint-python | datajoint/heading.py | Heading.as_dtype | def as_dtype(self):
"""
represent the heading as a numpy dtype
"""
return np.dtype(dict(
names=self.names,
formats=[v.dtype for v in self.attributes.values()])) | python | def as_dtype(self):
"""
represent the heading as a numpy dtype
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datajoint/datajoint-python | datajoint/heading.py | Heading.as_sql | def as_sql(self):
"""
represent heading as SQL field list
"""
return ','.join('`%s`' % name if self.attributes[name].sql_expression is None
else '%s as `%s`' % (self.attributes[name].sql_expression, name)
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datajoint/datajoint-python | datajoint/heading.py | Heading.join | def join(self, other):
"""
Join two headings into a new one.
It assumes that self and other are headings that share no common dependent attributes.
"""
return Heading(
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datajoint/datajoint-python | datajoint/heading.py | Heading.make_subquery_heading | def make_subquery_heading(self):
"""
Create a new heading with removed attribute sql_expressions.
Used by subqueries, which resolve the sql_expressions.
"""
return Heading(dict(v.todict(), sql_expression=None) for v in self.attributes.values()) | python | def make_subquery_heading(self):
"""
Create a new heading with removed attribute sql_expressions.
Used by subqueries, which resolve the sql_expressions.
"""
return Heading(dict(v.todict(), sql_expression=None) for v in self.attributes.values()) | [
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datajoint/datajoint-python | datajoint/blob.py | BlobReader.squeeze | def squeeze(self, array):
"""
Simplify the given array as much as possible - squeeze out all singleton
dimensions and also convert a zero dimensional array into array scalar
"""
if not self._squeeze:
return array
array = array.copy()
array = array.sque... | python | def squeeze(self, array):
"""
Simplify the given array as much as possible - squeeze out all singleton
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"""
if not self._squeeze:
return array
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datajoint/datajoint-python | datajoint/blob.py | BlobReader.read_string | def read_string(self, advance=True):
"""
Read a string terminated by null byte '\0'. The returned string
object is ASCII decoded, and will not include the terminating null byte.
"""
target = self._blob.find(b'\0', self.pos)
assert target >= self._pos
data = self._... | python | def read_string(self, advance=True):
"""
Read a string terminated by null byte '\0'. The returned string
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target = self._blob.find(b'\0', self.pos)
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datajoint/datajoint-python | datajoint/blob.py | BlobReader.read_value | def read_value(self, dtype='uint64', count=1, advance=True):
"""
Read one or more scalars of the indicated dtype. Count specifies the number of
scalars to be read in.
"""
data = np.frombuffer(self._blob, dtype=dtype, count=count, offset=self.pos)
if advance:
#... | python | def read_value(self, dtype='uint64', count=1, advance=True):
"""
Read one or more scalars of the indicated dtype. Count specifies the number of
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"""
data = np.frombuffer(self._blob, dtype=dtype, count=count, offset=self.pos)
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datajoint/datajoint-python | datajoint/external.py | ExternalTable.put | def put(self, store, obj):
"""
put an object in external store
"""
spec = self._get_store_spec(store)
blob = pack(obj)
blob_hash = long_hash(blob) + store[len('external-'):]
if spec['protocol'] == 'file':
folder = os.path.join(spec['location'], self.da... | python | def put(self, store, obj):
"""
put an object in external store
"""
spec = self._get_store_spec(store)
blob = pack(obj)
blob_hash = long_hash(blob) + store[len('external-'):]
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datajoint/datajoint-python | datajoint/external.py | ExternalTable.get | def get(self, blob_hash):
"""
get an object from external store.
Does not need to check whether it's in the table.
"""
if blob_hash is None:
return None
store = blob_hash[STORE_HASH_LENGTH:]
store = 'external' + ('-' if store else '') + store
... | python | def get(self, blob_hash):
"""
get an object from external store.
Does not need to check whether it's in the table.
"""
if blob_hash is None:
return None
store = blob_hash[STORE_HASH_LENGTH:]
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datajoint/datajoint-python | datajoint/external.py | ExternalTable.delete_garbage | def delete_garbage(self):
"""
Delete items that are no longer referenced.
This operation is safe to perform at any time.
"""
self.connection.query(
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... | python | def delete_garbage(self):
"""
Delete items that are no longer referenced.
This operation is safe to perform at any time.
"""
self.connection.query(
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datajoint/datajoint-python | datajoint/external.py | ExternalTable.clean_store | def clean_store(self, store, display_progress=True):
"""
Clean unused data in an external storage repository from unused blobs.
This must be performed after delete_garbage during low-usage periods to reduce risks of data loss.
"""
spec = self._get_store_spec(store)
progre... | python | def clean_store(self, store, display_progress=True):
"""
Clean unused data in an external storage repository from unused blobs.
This must be performed after delete_garbage during low-usage periods to reduce risks of data loss.
"""
spec = self._get_store_spec(store)
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datajoint/datajoint-python | datajoint/errors.py | is_connection_error | def is_connection_error(e):
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adafruit/Adafruit_Python_CharLCD | examples/char_lcd_rgb_pwm.py | hsv_to_rgb | def hsv_to_rgb(hsv):
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Hue should be an angle from 0.0 to 359.0. Saturation and value should be a
value from 0.0 to 1.0, where saturation controls the intensity of the hue and
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"""
# Algorit... | python | def hsv_to_rgb(hsv):
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adafruit/Adafruit_Python_CharLCD | Adafruit_CharLCD/Adafruit_CharLCD.py | Adafruit_CharLCD.set_cursor | def set_cursor(self, col, row):
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# Clamp row to the last row of the display.
if row > self._lines:
row = self._lines - 1
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# Clamp row to the last row of the display.
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adafruit/Adafruit_Python_CharLCD | Adafruit_CharLCD/Adafruit_CharLCD.py | Adafruit_CharLCD.enable_display | def enable_display(self, enable):
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if enable:
self.displaycontrol |= LCD_DISPLAYON
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"""Enable or disable the display. Set enable to True to enable."""
if enable:
self.displaycontrol |= LCD_DISPLAYON
else:
self.displaycontrol &= ~LCD_DISPLAYON
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adafruit/Adafruit_Python_CharLCD | Adafruit_CharLCD/Adafruit_CharLCD.py | Adafruit_CharLCD.show_cursor | def show_cursor(self, show):
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if show:
self.displaycontrol |= LCD_CURSORON
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self.displaycontrol |= LCD_CURSORON
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self.displaycontrol &= ~LCD_CURSORON
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adafruit/Adafruit_Python_CharLCD | Adafruit_CharLCD/Adafruit_CharLCD.py | Adafruit_CharLCD.blink | def blink(self, blink):
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if blink:
self.displaycontrol |= LCD_BLINKON
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self.displaycontrol &= ~LCD_BLINKON
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"""Turn on or off cursor blinking. Set blink to True to enable blinking."""
if blink:
self.displaycontrol |= LCD_BLINKON
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self.displaycontrol &= ~LCD_BLINKON
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adafruit/Adafruit_Python_CharLCD | Adafruit_CharLCD/Adafruit_CharLCD.py | Adafruit_CharLCD.set_left_to_right | def set_left_to_right(self):
"""Set text direction left to right."""
self.displaymode |= LCD_ENTRYLEFT
self.write8(LCD_ENTRYMODESET | self.displaymode) | python | def set_left_to_right(self):
"""Set text direction left to right."""
self.displaymode |= LCD_ENTRYLEFT
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adafruit/Adafruit_Python_CharLCD | Adafruit_CharLCD/Adafruit_CharLCD.py | Adafruit_CharLCD.set_right_to_left | def set_right_to_left(self):
"""Set text direction right to left."""
self.displaymode &= ~LCD_ENTRYLEFT
self.write8(LCD_ENTRYMODESET | self.displaymode) | python | def set_right_to_left(self):
"""Set text direction right to left."""
self.displaymode &= ~LCD_ENTRYLEFT
self.write8(LCD_ENTRYMODESET | self.displaymode) | [
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adafruit/Adafruit_Python_CharLCD | Adafruit_CharLCD/Adafruit_CharLCD.py | Adafruit_CharLCD.autoscroll | def autoscroll(self, autoscroll):
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"""
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"""Autoscroll will 'right justify' text from the cursor if set True,
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"""
if autoscroll:
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"""Write text to display. Note that text can include newlines."""
line = 0
# Iterate through each character.
for char in text:
# Advance to next line if character is a new line.
if char == '\n':
line += 1
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i3visio/osrframework | osrframework/utils/regexp.py | RegexpObject.findExp | def findExp(self, data):
'''
Method to look for the current regular expression in the provided string.
:param data: string containing the text where the expressions will be looked for.
:return: a list of verified regular expressions.
'''
temp = []
... | python | def findExp(self, data):
'''
Method to look for the current regular expression in the provided string.
:param data: string containing the text where the expressions will be looked for.
:return: a list of verified regular expressions.
'''
temp = []
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i3visio/osrframework | osrframework/utils/general.py | exportUsufy | def exportUsufy(data, ext, fileH):
"""
Method that exports the different structures onto different formats.
Args:
-----
data: Data to export.
ext: One of the following: csv, excel, json, ods.
fileH: Fileheader for the output files.
Returns:
--------
Performs the... | python | def exportUsufy(data, ext, fileH):
"""
Method that exports the different structures onto different formats.
Args:
-----
data: Data to export.
ext: One of the following: csv, excel, json, ods.
fileH: Fileheader for the output files.
Returns:
--------
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i3visio/osrframework | osrframework/utils/general.py | _generateTabularData | def _generateTabularData(res, oldTabularData = {}, isTerminal=False, canUnicode=True):
"""
Method that recovers the values and columns from the current structure
This method is used by:
- usufyToCsvExport
- usufyToOdsExport
- usufyToXlsExport
- usufyToXlsxExport
Args:
... | python | def _generateTabularData(res, oldTabularData = {}, isTerminal=False, canUnicode=True):
"""
Method that recovers the values and columns from the current structure
This method is used by:
- usufyToCsvExport
- usufyToOdsExport
- usufyToXlsExport
- usufyToXlsxExport
Args:
... | [
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i3visio/osrframework | osrframework/utils/general.py | usufyToJsonExport | def usufyToJsonExport(d, fPath):
"""
Workaround to export to a json file.
Args:
-----
d: Data to export.
fPath: File path for the output file.
"""
oldData = []
try:
with open (fPath) as iF:
oldText = iF.read()
if oldText != "":
... | python | def usufyToJsonExport(d, fPath):
"""
Workaround to export to a json file.
Args:
-----
d: Data to export.
fPath: File path for the output file.
"""
oldData = []
try:
with open (fPath) as iF:
oldText = iF.read()
if oldText != "":
... | [
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i3visio/osrframework | osrframework/utils/general.py | usufyToTextExport | def usufyToTextExport(d, fPath=None):
"""
Workaround to export to a .txt file or to show the information.
Args:
-----
d: Data to export.
fPath: File path for the output file. If None was provided, it will
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Returns:
--------
uni... | python | def usufyToTextExport(d, fPath=None):
"""
Workaround to export to a .txt file or to show the information.
Args:
-----
d: Data to export.
fPath: File path for the output file. If None was provided, it will
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Returns:
--------
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i3visio/osrframework | osrframework/utils/general.py | usufyToCsvExport | def usufyToCsvExport(d, fPath):
"""
Workaround to export to a CSV file.
Args:
-----
d: Data to export.
fPath: File path for the output file.
"""
from pyexcel_io import get_data
try:
oldData = {"OSRFramework": get_data(fPath) }
except:
# No information ha... | python | def usufyToCsvExport(d, fPath):
"""
Workaround to export to a CSV file.
Args:
-----
d: Data to export.
fPath: File path for the output file.
"""
from pyexcel_io import get_data
try:
oldData = {"OSRFramework": get_data(fPath) }
except:
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i3visio/osrframework | osrframework/utils/general.py | usufyToOdsExport | def usufyToOdsExport(d, fPath):
"""
Workaround to export to a .ods file.
Args:
-----
d: Data to export.
fPath: File path for the output file.
"""
from pyexcel_ods import get_data
try:
#oldData = get_data(fPath)
# A change in the API now returns only an array ... | python | def usufyToOdsExport(d, fPath):
"""
Workaround to export to a .ods file.
Args:
-----
d: Data to export.
fPath: File path for the output file.
"""
from pyexcel_ods import get_data
try:
#oldData = get_data(fPath)
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i3visio/osrframework | osrframework/utils/general.py | usufyToXlsExport | def usufyToXlsExport(d, fPath):
"""
Workaround to export to a .xls file.
Args:
-----
d: Data to export.
fPath: File path for the output file.
"""
from pyexcel_xls import get_data
try:
#oldData = get_data(fPath)
# A change in the API now returns only an array ... | python | def usufyToXlsExport(d, fPath):
"""
Workaround to export to a .xls file.
Args:
-----
d: Data to export.
fPath: File path for the output file.
"""
from pyexcel_xls import get_data
try:
#oldData = get_data(fPath)
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i3visio/osrframework | osrframework/utils/general.py | usufyToXlsxExport | def usufyToXlsxExport(d, fPath):
"""
Workaround to export to a .xlsx file.
Args:
-----
d: Data to export.
fPath: File path for the output file.
"""
from pyexcel_xlsx import get_data
try:
#oldData = get_data(fPath)
# A change in the API now returns only an arr... | python | def usufyToXlsxExport(d, fPath):
"""
Workaround to export to a .xlsx file.
Args:
-----
d: Data to export.
fPath: File path for the output file.
"""
from pyexcel_xlsx import get_data
try:
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i3visio/osrframework | osrframework/utils/general.py | _generateGraphData | def _generateGraphData(data, oldData=nx.Graph()):
"""
Processing the data from i3visio structures to generate nodes and edges
This function uses the networkx graph library. It will create a new node
for each and i3visio.<something> entities while it will add properties for
all the attribute startin... | python | def _generateGraphData(data, oldData=nx.Graph()):
"""
Processing the data from i3visio structures to generate nodes and edges
This function uses the networkx graph library. It will create a new node
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i3visio/osrframework | osrframework/utils/general.py | usufyToGmlExport | def usufyToGmlExport(d, fPath):
"""
Workaround to export data to a .gml file.
Args:
-----
d: Data to export.
fPath: File path for the output file.
"""
# Reading the previous gml file
try:
oldData=nx.read_gml(fPath)
except UnicodeDecodeError as e:
print("U... | python | def usufyToGmlExport(d, fPath):
"""
Workaround to export data to a .gml file.
Args:
-----
d: Data to export.
fPath: File path for the output file.
"""
# Reading the previous gml file
try:
oldData=nx.read_gml(fPath)
except UnicodeDecodeError as e:
print("U... | [
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] | 83437f4c14c9c08cb80a896bd9834c77f6567871 | https://github.com/i3visio/osrframework/blob/83437f4c14c9c08cb80a896bd9834c77f6567871/osrframework/utils/general.py#L597-L625 | train |
i3visio/osrframework | osrframework/utils/general.py | usufyToPngExport | def usufyToPngExport(d, fPath):
"""
Workaround to export to a png file.
Args:
-----
d: Data to export.
fPath: File path for the output file.
"""
newGraph = _generateGraphData(d)
import matplotlib.pyplot as plt
# Writing the png file
nx.draw(newGraph)
plt.savefig... | python | def usufyToPngExport(d, fPath):
"""
Workaround to export to a png file.
Args:
-----
d: Data to export.
fPath: File path for the output file.
"""
newGraph = _generateGraphData(d)
import matplotlib.pyplot as plt
# Writing the png file
nx.draw(newGraph)
plt.savefig... | [
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i3visio/osrframework | osrframework/utils/general.py | fileToMD5 | def fileToMD5(filename, block_size=256*128, binary=False):
"""
A function that calculates the MD5 hash of a file.
Args:
-----
filename: Path to the file.
block_size: Chunks of suitable size. Block size directly depends on
the block size of your filesystem to avoid performanc... | python | def fileToMD5(filename, block_size=256*128, binary=False):
"""
A function that calculates the MD5 hash of a file.
Args:
-----
filename: Path to the file.
block_size: Chunks of suitable size. Block size directly depends on
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i3visio/osrframework | osrframework/utils/general.py | getCurrentStrDatetime | def getCurrentStrDatetime():
"""
Generating the current Datetime with a given format
Returns:
--------
string: The string of a date.
"""
# Generating current time
i = datetime.datetime.now()
strTime = "%s-%s-%s_%sh%sm" % (i.year, i.month, i.day, i.hour, i.minute)
return strT... | python | def getCurrentStrDatetime():
"""
Generating the current Datetime with a given format
Returns:
--------
string: The string of a date.
"""
# Generating current time
i = datetime.datetime.now()
strTime = "%s-%s-%s_%sh%sm" % (i.year, i.month, i.day, i.hour, i.minute)
return strT... | [
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i3visio/osrframework | osrframework/utils/general.py | getFilesFromAFolder | def getFilesFromAFolder(path):
"""
Getting all the files in a folder.
Args:
-----
path: The path in which looking for the files
Returns:
--------
list: The list of filenames found.
"""
from os import listdir
from os.path import isfile, join
#onlyfiles = [ f for ... | python | def getFilesFromAFolder(path):
"""
Getting all the files in a folder.
Args:
-----
path: The path in which looking for the files
Returns:
--------
list: The list of filenames found.
"""
from os import listdir
from os.path import isfile, join
#onlyfiles = [ f for ... | [
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path: The path in which looking for the files
Returns:
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list: The list of filenames found. | [
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i3visio/osrframework | osrframework/utils/general.py | urisToBrowser | def urisToBrowser(uris=[], autoraise=True):
"""
Method that launches the URI in the default browser of the system
This function temporally deactivates the standard ouptut and errors to
prevent the system to show unwanted messages. This method is based on this
question from Stackoverflow.
https:... | python | def urisToBrowser(uris=[], autoraise=True):
"""
Method that launches the URI in the default browser of the system
This function temporally deactivates the standard ouptut and errors to
prevent the system to show unwanted messages. This method is based on this
question from Stackoverflow.
https:... | [
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This function temporally deactivates the standard ouptut and errors to
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https://stackoverflow.com/questions/2323080/how-can-i-disable-... | [
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i3visio/osrframework | osrframework/utils/general.py | openResultsInBrowser | def openResultsInBrowser(res):
"""
Method that collects the URI from a list of entities and opens them
Args:
-----
res: A list containing several i3visio entities.
"""
print(emphasis("\n\tOpening URIs in the default web browser..."))
urisToBrowser(["https://github.com/i3visio/osrfr... | python | def openResultsInBrowser(res):
"""
Method that collects the URI from a list of entities and opens them
Args:
-----
res: A list containing several i3visio entities.
"""
print(emphasis("\n\tOpening URIs in the default web browser..."))
urisToBrowser(["https://github.com/i3visio/osrfr... | [
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i3visio/osrframework | osrframework/utils/general.py | colorize | def colorize(text, messageType=None):
"""
Function that colorizes a message.
Args:
-----
text: The string to be colorized.
messageType: Possible options include "ERROR", "WARNING", "SUCCESS",
"INFO" or "BOLD".
Returns:
--------
string: Colorized if the optio... | python | def colorize(text, messageType=None):
"""
Function that colorizes a message.
Args:
-----
text: The string to be colorized.
messageType: Possible options include "ERROR", "WARNING", "SUCCESS",
"INFO" or "BOLD".
Returns:
--------
string: Colorized if the optio... | [
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Args:
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text: The string to be colorized.
messageType: Possible options include "ERROR", "WARNING", "SUCCESS",
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Returns:
--------
string: Colorized if the option is correct, including a tag at the end
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i3visio/osrframework | osrframework/utils/general.py | showLicense | def showLicense():
"""
Method that prints the license if requested.
It tries to find the license online and manually download it. This method
only prints its contents in plain text.
"""
print("Trying to recover the contents of the license...\n")
try:
# Grab the license online and pr... | python | def showLicense():
"""
Method that prints the license if requested.
It tries to find the license online and manually download it. This method
only prints its contents in plain text.
"""
print("Trying to recover the contents of the license...\n")
try:
# Grab the license online and pr... | [
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It tries to find the license online and manually download it. This method
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