| from typing import Tuple, Dict |
| from evaluate_code.ph_utils import count_connected_components |
| from evaluate_code.ph_utils import check_graph_group |
| import statistics |
| import numpy as np |
| import json |
| class Evaluator: |
| def __init__(self, task_name): |
| self.task_name = task_name |
| def evaluate(self, graph_data, extracted_answers): |
| """ |
| Call the corresponding evaluation function based on the task type |
| |
| Args: |
| graph_data: List of graph data objects |
| extracted_answers: List of dicts with number_of_features |
| task_type: Task type |
| |
| Returns: |
| accuracy: accuracy |
| evaluation_results: dict containing detailed evaluation results and statistics |
| """ |
| task_evaluators = { |
| "S_0D": self.evaluate_S_0D, |
| "S_1D": self.evaluate_S_1D, |
| "S_Modification": self.evaluate_S_Modification, |
| "M_Merge": self.evaluate_M_Merge, |
| "M_Birth": self.evaluate_M_Birth, |
| "M_Filtration": self.evaluate_M_Filtration, |
| "H_Selection": self.evaluate_H_Selection, |
| "H_Generation": self.evaluate_H_Generation, |
| "R_Selection": self.evaluate_R_Selection, |
| "R_Generation": self.evaluate_R_Generation, |
| "R_Classification": self.evaluate_R_Classification, |
| } |
| |
| if self.task_name not in task_evaluators: |
| raise ValueError(f"Unsupported task type: {self.task_name}") |
| |
| return task_evaluators[self.task_name](graph_data, extracted_answers) |
| |
| def evaluate_S_0D(self, graph_data, extracted_answers): |
| """ |
| Evaluate the accuracy of the structure_0dim_identification task |
| |
| Args: |
| graph_data: List of graph data objects |
| extracted_answers: List of dicts with number_of_features |
| |
| Returns: |
| accuracy: accuracy |
| evaluation_results: dict containing detailed evaluation results and statistics |
| """ |
| correct_count = 0 |
| total_count = len(extracted_answers) |
| evaluation_results = [] |
| |
| for i, answer in enumerate(extracted_answers): |
| if i >= len(graph_data): |
| break |
| |
| |
| correct_answer = graph_data[i]["num_components"] |
| |
| |
| predicted_answer = answer.get("connected_components") |
| |
| is_correct = predicted_answer == correct_answer |
| if is_correct: |
| correct_count += 1 |
| |
| |
| evaluation_result = { |
| "is_correct": is_correct, |
| "predicted_answer": predicted_answer, |
| "correct_answer": correct_answer |
| } |
| evaluation_results.append(evaluation_result) |
| |
| |
| accuracy = correct_count / total_count if total_count > 0 else 0 |
| |
| |
| stats = { |
| "total_samples": total_count, |
| "correct_count": correct_count, |
| "wrong_count": total_count - correct_count, |
| "accuracy": accuracy |
| } |
| |
| return accuracy, { |
| "statistics": stats, |
| "detailed_results": evaluation_results |
| } |
| def evaluate_S_1D(self, graph_data, extracted_answers): |
| """ |
| Evaluate the accuracy of the structure_1dim_identification task, including two sets of metrics: |
| 1. Whether the existence of 1-dimensional features is correctly judged (through the has_feature field) |
| 2. For graphs with 1-dimensional features, whether the barcodes match completely |
| |
| Args: |
| graph_data: List of graph data objects |
| extracted_answers: List of dicts with has_feature and persistence_pairs |
| |
| Returns: |
| accuracy: accuracy of existence judgment |
| evaluation_results: dict containing detailed evaluation results and statistics |
| """ |
| correct_count = 0 |
| total_count = len(extracted_answers) |
| evaluation_results = [] |
| |
| for i, answer in enumerate(extracted_answers): |
| if i >= len(graph_data): |
| break |
| |
| |
| correct_answer = graph_data[i]["num_holes"] |
| |
| |
| predicted_answer = answer.get("cycle_holes") |
| if predicted_answer is None: |
| evaluation_results.append({ |
| "index": i, |
| "correct": correct_answer, |
| "predicted": None, |
| "match": False, |
| "error": "Missing 'cycle_holes'" |
| }) |
| continue |
| is_correct = predicted_answer == correct_answer |
| if is_correct: |
| correct_count += 1 |
| |
| |
| evaluation_result = { |
| "is_correct": is_correct, |
| "predicted_answer": predicted_answer, |
| "correct_answer": correct_answer |
| } |
| evaluation_results.append(evaluation_result) |
| |
| |
| accuracy = correct_count / total_count if total_count > 0 else 0 |
| |
| |
| stats = { |
| "total_samples": total_count, |
| "correct_count": correct_count, |
| "wrong_count": total_count - correct_count, |
| "accuracy": accuracy |
| } |
| |
| return accuracy, { |
| "statistics": stats, |
| "detailed_results": evaluation_results |
| } |
| def evaluate_S_Modification(self, graph_data, extracted_answers): |
| """ |
| Evaluate graph_0dim_modification accuracy |
| |
| Args: |
| graph_data: List of graph data objects |
| extracted_answers: List of dicts with edge_to_add |
| |
| Returns: |
| accuracy: accuracy |
| evaluation_results: dict containing detailed evaluation results and statistics |
| """ |
| correct_count = 0 |
| total_count = len(graph_data) |
| evaluation_results = [] |
| |
| for i, (graph, answer) in enumerate(zip(graph_data, extracted_answers)): |
| |
| if "error" in answer: |
| evaluation_results.append({ |
| "is_correct": False, |
| "error": answer["error"] |
| }) |
| continue |
| |
| if "edge_to_add" not in answer: |
| evaluation_results.append({ |
| "is_correct": False, |
| "error": "Missing edge_to_add in answer" |
| }) |
| continue |
| |
| |
| edge_to_add = answer["edge_to_add"] |
| if len(edge_to_add) != 2: |
| evaluation_results.append({ |
| "is_correct": False, |
| "error": f"Invalid edge format: {edge_to_add}" |
| }) |
| continue |
| |
| |
| original_edge_index = graph["edge_index"] |
| num_nodes = graph["num_nodes"] |
| |
| |
| if len(original_edge_index.shape) == 1: |
| original_edge_index = original_edge_index.reshape(2, -1) |
| |
| |
| if edge_to_add[0] >= num_nodes or edge_to_add[1] >= num_nodes: |
| evaluation_results.append({ |
| "is_correct": False, |
| "error": f"Node indices out of range: {edge_to_add}, max index is {num_nodes-1}" |
| }) |
| continue |
| |
| |
| original_components = graph["num_components"] |
| |
| |
| new_edge = np.array([[edge_to_add[0]], [edge_to_add[1]]], dtype=np.int64) |
| new_edge_index = np.concatenate([original_edge_index, new_edge], axis=1) |
| |
| |
| new_components = count_connected_components(new_edge_index, num_nodes) |
| |
| |
| is_correct = new_components < original_components |
| |
| if is_correct: |
| correct_count += 1 |
| |
| evaluation_results.append({ |
| "is_correct": is_correct, |
| "edge_added": edge_to_add, |
| "original_components": original_components, |
| "new_components": new_components |
| }) |
| |
| |
| accuracy = correct_count / total_count if total_count > 0 else 0 |
| |
| |
| stats = { |
| "total_samples": total_count, |
| "correct_count": correct_count, |
| "wrong_count": total_count - correct_count, |
| "accuracy": accuracy |
| } |
| |
| return accuracy, { |
| "statistics": stats, |
| "detailed_results": evaluation_results |
| } |
| |
| def evaluate_filtration_edge_construction(self, graph_data, extracted_answers): |
| """ |
| Evaluate filtration edge construction accuracy |
| |
| Args: |
| graph_data: List of graph data objects |
| extracted_answers: List of dicts with sorted_edges |
| |
| Returns: |
| accuracy: accuracy |
| evaluation_results: dict containing detailed evaluation results and statistics |
| """ |
| correct_count = 0 |
| total_count = len(extracted_answers) |
| evaluation_results = [] |
| |
| for i, answer in enumerate(extracted_answers): |
| if i >= len(graph_data): |
| break |
| |
| |
| correct_edges = graph_data[i]["sorted_edges"] |
| |
| |
| predicted_filtration = answer["filtration"] |
| |
| |
| predicted_edges = [] |
| for value, edges in predicted_filtration.items(): |
| for u, v in edges: |
| predicted_edges.append((u, v, float(value))) |
| |
| |
| predicted_edges.sort(key=lambda x: x[2]) |
| |
| |
| is_correct = len(predicted_edges) == len(correct_edges) |
| if is_correct: |
| for pred, corr in zip(predicted_edges, correct_edges): |
| if pred != corr: |
| is_correct = False |
| break |
| |
| if is_correct: |
| correct_count += 1 |
| |
| |
| evaluation_result = { |
| "is_correct": is_correct, |
| "predicted_edges": predicted_edges, |
| "correct_edges": correct_edges, |
| "edge_count_match": len(predicted_edges) == len(correct_edges), |
| "edge_order_match": is_correct |
| } |
| evaluation_results.append(evaluation_result) |
| |
| |
| accuracy = correct_count / total_count if total_count > 0 else 0 |
| |
| |
| stats = { |
| "total_samples": total_count, |
| "correct_count": correct_count, |
| "wrong_count": total_count - correct_count, |
| "accuracy": accuracy |
| } |
| |
| return accuracy, { |
| "statistics": stats, |
| "detailed_results": evaluation_results |
| } |
| |
| def evaluate_simplicial_complex_construction(self, graph_data, extracted_answers): |
| """ |
| Evaluate simplicial complex construction accuracy |
| |
| Args: |
| graph_data: List of graph data objects |
| extracted_answers: List of dicts with simplicial_complexes |
| |
| Returns: |
| accuracy: accuracy |
| evaluation_results: dict containing detailed evaluation results and statistics |
| """ |
| correct_count = 0 |
| total_count = len(extracted_answers) |
| evaluation_results = [] |
| |
| for i, answer in enumerate(extracted_answers): |
| if i >= len(graph_data): |
| break |
| |
| |
| correct_simplices = {} |
| for simplex, value in graph_data[i]["simplex"]: |
| if len(simplex) == 3: |
| if value not in correct_simplices: |
| correct_simplices[value] = [] |
| correct_simplices[value].append(sorted(simplex)) |
| |
| |
| predicted_simplices = answer.get("simplicial_complexes", {}) |
| |
| is_correct = True |
| |
| |
| all_values = set(list(correct_simplices.keys()) + list(predicted_simplices.keys())) |
| for value in all_values: |
| correct = sorted([sorted(s) for s in correct_simplices.get(value, [])]) |
| predicted = sorted([sorted(s) for s in predicted_simplices.get(value, [])]) |
| |
| if correct != predicted: |
| is_correct = False |
| break |
| |
| if is_correct: |
| correct_count += 1 |
| |
| |
| evaluation_result = { |
| "is_correct": is_correct, |
| "predicted_simplices": predicted_simplices, |
| "correct_simplices": correct_simplices, |
| "value_match": is_correct |
| } |
| evaluation_results.append(evaluation_result) |
| |
| |
| accuracy = correct_count / total_count if total_count > 0 else 0 |
| |
| |
| stats = { |
| "total_samples": total_count, |
| "correct_count": correct_count, |
| "wrong_count": total_count - correct_count, |
| "accuracy": accuracy |
| } |
| |
| return accuracy, { |
| "statistics": stats, |
| "detailed_results": evaluation_results |
| } |
| |
| def evaluate_M_Merge(self, graph_data, extracted_answers): |
| """ |
| Evaluate 0-dimensional persistent homology calculation accuracy |
| |
| Args: |
| graph_data: List of graph data objects |
| extracted_answers: List of dictionaries containing death time of feature |
| |
| Returns: |
| accuracy: accuracy |
| evaluation_results: dict containing detailed evaluation results and statistics |
| """ |
| correct_count = 0 |
| total_count = len(extracted_answers) |
| evaluation_results = [] |
| |
| for i, answer in enumerate(extracted_answers): |
| if i >= len(graph_data): |
| break |
| |
| |
| correct_time = graph_data[i]["death_value"] |
| |
| |
| if "error" in answer: |
| is_correct = False |
| predicted_time = None |
| else: |
| predicted_time = answer.get("death_time", [None])[0] |
| is_correct = predicted_time == correct_time |
|
|
| if is_correct: |
| correct_count += 1 |
| |
| evaluation_result = { |
| "is_correct": is_correct, |
| "predicted_time": predicted_time, |
| "correct_time": correct_time |
| } |
| evaluation_results.append(evaluation_result) |
| |
| accuracy = correct_count / total_count if total_count > 0 else 0 |
| |
| stats = { |
| "total_samples": total_count, |
| "correct_count": correct_count, |
| "wrong_count": total_count - correct_count, |
| "accuracy": accuracy |
| } |
| |
| return accuracy, { |
| "statistics": stats, |
| "detailed_results": evaluation_results |
| } |
|
|
| def evaluate_M_Birth(self, graph_data, extracted_answers): |
| """ |
| Evaluate 1-dimensional persistent homology calculation accuracy |
| |
| Args: |
| graph_data: List of graph data objects |
| extracted_answers: List of dicts with persistent_features |
| |
| Returns: |
| accuracy: accuracy |
| evaluation_results: dict containing detailed evaluation results and statistics |
| """ |
| correct_count = 0 |
| total_count = len(extracted_answers) |
| evaluation_results = [] |
| |
| for i, answer in enumerate(extracted_answers): |
| if i >= len(graph_data): |
| break |
| |
| |
| correct_time = graph_data[i]["birth_value"] |
| |
| |
| if "error" in answer: |
| is_correct = False |
| predicted_time = None |
| else: |
| predicted_time = answer.get("birth_time", [None])[0] |
| is_correct = predicted_time == correct_time |
|
|
| if is_correct: |
| correct_count += 1 |
| |
| evaluation_result = { |
| "is_correct": is_correct, |
| "predicted_time": predicted_time, |
| "correct_time": correct_time |
| } |
| evaluation_results.append(evaluation_result) |
| |
| accuracy = correct_count / total_count if total_count > 0 else 0 |
| |
| stats = { |
| "total_samples": total_count, |
| "correct_count": correct_count, |
| "wrong_count": total_count - correct_count, |
| "accuracy": accuracy |
| } |
| |
| return accuracy, { |
| "statistics": stats, |
| "detailed_results": evaluation_results |
| } |
| def evaluate_M_Filtration(self, graph_data, extracted_answers): |
| """ |
| Evaluate filtration_features_count accuracy |
| |
| Args: |
| graph_data: List of graph data objects |
| extracted_answers: filtration_features_count number |
| |
| Returns: |
| accuracy: accuracy |
| evaluation_results: dict containing detailed evaluation results and statistics |
| """ |
| correct_count = 0 |
| total_count = len(extracted_answers) |
| evaluation_results = [] |
| |
| for i, answer in enumerate(extracted_answers): |
| if i >= len(graph_data): |
| break |
| |
| |
| correct_n = graph_data[i]["t3_0dim"] |
| |
| |
| if "error" in answer: |
| is_correct = False |
| predicted_count = None |
| else: |
| predicted_count = answer.get("connected_components", [None])[0] |
| is_correct = predicted_count == correct_n |
|
|
| if is_correct: |
| correct_count += 1 |
| |
| evaluation_result = { |
| "is_correct": is_correct, |
| "predicted_count": predicted_count, |
| "correct_count": correct_n |
| } |
| evaluation_results.append(evaluation_result) |
| |
| accuracy = correct_count / total_count if total_count > 0 else 0 |
| |
| stats = { |
| "total_samples": total_count, |
| "correct_count": correct_count, |
| "wrong_count": total_count - correct_count, |
| "accuracy": accuracy |
| } |
| |
| return accuracy, { |
| "statistics": stats, |
| "detailed_results": evaluation_results |
| } |
| def _check_edge_sorting(self, edge_sorting, graph_data): |
| """Check if edge sorting is correct""" |
|
|
| try: |
| |
| if not edge_sorting: |
| return False |
| |
| |
| for i in range(1, len(edge_sorting)): |
| if edge_sorting[i][2] < edge_sorting[i-1][2]: |
| return False |
| |
| return True |
| except: |
| return False |
| |
|
|
|
|
| def evaluate_H_Selection(self, graph_data, extracted_answers) -> Tuple[float, Dict]: |
| """ |
| Evaluate filtration method selection ranking statistics |
| |
| Args: |
| graph_data: List of graph data objects, where graph_data[2i].better_filter contains correct answer |
| extracted_answers: List of dicts with selected_method |
| |
| Returns: |
| Tuple of (accuracy, detailed results dict) |
| """ |
| detailed_results = [] |
| |
| all_ranks = [] |
| top1_count = 0 |
| top2_count = 0 |
| top3_count = 0 |
| |
| for i, answer in enumerate(extracted_answers): |
| if answer is None or answer.get("selected_method") is None: |
| detailed_results.append({ |
| "reason": "No valid answer extracted" |
| }) |
| continue |
| |
| graph_idx = i |
| if graph_idx >= len(graph_data): |
| break |
| |
| predicted_method = answer["selected_method"] |
| if predicted_method == 'weight': |
| predicted_method = 'e' |
| if predicted_method == "k-shell": |
| predicted_method = "k_shell" |
| dist_features = {'dist_k_shell': graph_data[graph_idx][0]['dist_k_shell'], 'dist_closeness': graph_data[graph_idx][0]['dist_closeness'], 'dist_e': graph_data[graph_idx][0]['dist_e'], 'dist_betweenness': graph_data[graph_idx][0]['dist_betweenness'], 'dist_degree': graph_data[graph_idx][0]['dist_degree'], 'dist_eigenvector': graph_data[graph_idx][0]['dist_eigenvector']} |
| |
| predicted_rank = None |
| current_rank = 1 |
| current_distance = None |
| same_rank_count = 0 |
| |
| for method, distance in dist_features.items(): |
| if current_distance is not None and distance != current_distance: |
| current_rank += same_rank_count |
| same_rank_count = 0 |
| current_distance = distance |
| elif current_distance is None: |
| current_distance = distance |
| |
| if method.replace('dist_', '') == predicted_method: |
| predicted_rank = current_rank |
| all_ranks.append(current_rank) |
| if current_rank == 1: |
| top1_count += 1 |
| if current_rank <= 2: |
| top2_count += 1 |
| if current_rank <= 3: |
| top3_count += 1 |
| break |
| |
| same_rank_count += 1 |
| |
| detailed_results.append({ |
| "predicted": predicted_method, |
| "predicted_rank": predicted_rank, |
| "method_rankings": dict(dist_features) |
| }) |
| |
| ranking_stats = { |
| 'mean_rank': sum(all_ranks) / len(all_ranks) if all_ranks else float('inf'), |
| 'min_rank': min(all_ranks) if all_ranks else float('inf'), |
| 'max_rank': max(all_ranks) if all_ranks else float('inf'), |
| 'std_rank': statistics.stdev(all_ranks) if len(all_ranks) > 1 else 0, |
| 'total_predictions': len(all_ranks), |
| 'top1_count': top1_count, |
| 'top2_count': top2_count, |
| 'top3_count': top3_count, |
| 'top1_ratio': top1_count / len(all_ranks) if all_ranks else 0, |
| 'top2_ratio': top2_count / len(all_ranks) if all_ranks else 0, |
| 'top3_ratio': top3_count / len(all_ranks) if all_ranks else 0 |
| } |
| |
| return 0.0, { |
| "statistics": { |
| **ranking_stats |
| }, |
| "detailed_results": detailed_results |
| } |
|
|
| def evaluate_H_Generation(self, graph_data, extracted_answers) -> Tuple[float, Dict]: |
| """ |
| 评估过滤序列选择的排名统计 |
| |
| Args: |
| graph_data: List of graph data objects |
| extracted_answers: List of dicts with selected_filtration_values field |
| |
| Returns: |
| Tuple (accuracy, detailed_results_dict) |
| """ |
| total = 0 |
| detailed_results = [] |
| |
| for i, answer in enumerate(extracted_answers): |
| if i >= len(graph_data): |
| break |
| |
| if answer is None or "selected_filtration_values" not in answer: |
| detailed_results.append({ |
| "reason": "No valid answer extracted" |
| }) |
| continue |
| |
| graph1 = graph_data[i][0] |
|
|
| selected_values = answer["selected_filtration_values"] |
| if isinstance(selected_values, (int, float)): |
| selected_values = [[selected_values]] |
| elif isinstance(selected_values, (list, tuple)) and not any(isinstance(x, (list, tuple)) for x in selected_values): |
| selected_values = [selected_values] |
| |
| selected_distances = [] |
| selected_ranks = [] |
| |
| for seq in selected_values: |
| if not isinstance(seq, (list, tuple)): |
| seq = [seq] |
| seq_tuple = tuple(sorted(float(x) if isinstance(x, (int, float)) else x for x in seq)) |
| |
| found_match = False |
| current_rank = 1 |
| current_distance = None |
| same_rank_count = 0 |
| sorted_distances = json.loads(graph1['sorted_distances']) |
| for item in sorted_distances: |
| curr_seq = item['nodes'] |
| distance = item['distance'] |
| curr_seq_tuple = tuple(sorted(float(x) if isinstance(x, (int, float)) else x for x in curr_seq)) |
| |
| if current_distance is not None and distance != current_distance: |
| current_rank += same_rank_count |
| same_rank_count = 0 |
| current_distance = distance |
| elif current_distance is None: |
| current_distance = distance |
| |
| if curr_seq_tuple == seq_tuple: |
| selected_distances.append(float(distance)) |
| selected_ranks.append(current_rank) |
| found_match = True |
| break |
| |
| same_rank_count += 1 |
| |
| if not found_match: |
| selected_distances.append(float('inf')) |
| selected_ranks.append(len(graph1.sorted_distances) + 1) |
| |
| rank = sum(selected_ranks) / len(selected_ranks) if selected_ranks else float('inf') |
| |
| in_top3 = sum(1 for rank in selected_ranks if rank <= 3) |
| in_top10 = sum(1 for rank in selected_ranks if rank <= 10) |
| top3 = in_top3 / len(selected_ranks) if selected_ranks else 0 |
| top10 = in_top10 / len(selected_ranks) if selected_ranks else 0 |
| |
| total += 1 |
| |
| detailed_results.append({ |
| "selected_ranks": selected_ranks, |
| "selected_distances": selected_distances, |
| "rank": float(rank), |
| "top3": float(top3), |
| "top10": float(top10), |
| "original_values": selected_values |
| }) |
| |
| valid_results = [r for r in detailed_results if "rank" in r] |
| rank_list = [r["rank"] for r in valid_results] |
|
|
| avg_stats = { |
| "mean_rank": float(sum(rank_list) / len(rank_list)) if rank_list else float('inf'), |
| "top3": float(sum(r["top3"] for r in valid_results) / len(valid_results)) if valid_results else 0.0, |
| "top10": float(sum(r["top10"] for r in valid_results) / len(valid_results)) if valid_results else 0.0, |
| "std_rank": float(statistics.stdev(rank_list)) if len(rank_list) > 1 else 0.0 |
| } |
| |
| return 0.0, { |
| "statistics": { |
| "total": int(total), |
| **avg_stats |
| }, |
| "detailed_results": detailed_results |
| } |
| |
| def evaluate_R_Classification(self, graph_data, extracted_answers): |
| correct_count = 0 |
| total_count = len(extracted_answers) |
| evaluation_results = [] |
|
|
| ground_truth_sorted = sorted([sorted([1, 2]), sorted([3, 4])]) |
|
|
| for i, answer in enumerate(extracted_answers): |
| if "error" in answer or "categories" not in answer: |
| evaluation_results.append({ |
| "index": i, |
| "is_correct": False, |
| "reason": "Missing or invalid 'categories' field", |
| "predicted": None, |
| "expected": ground_truth_sorted |
| }) |
| continue |
|
|
| predicted = answer["categories"] |
|
|
| try: |
| predicted_sorted = sorted([sorted(group) for group in predicted]) |
| is_correct = predicted_sorted == ground_truth_sorted |
| except Exception as e: |
| is_correct = False |
| predicted_sorted = None |
|
|
| if is_correct: |
| correct_count += 1 |
|
|
| evaluation_results.append({ |
| "index": i, |
| "is_correct": is_correct, |
| "predicted": predicted, |
| "expected": ground_truth_sorted |
| }) |
|
|
| accuracy = correct_count / total_count if total_count > 0 else 0.0 |
|
|
| stats = { |
| "total_samples": total_count, |
| "correct_count": correct_count, |
| "wrong_count": total_count - correct_count, |
| "accuracy": accuracy |
| } |
|
|
| return accuracy, { |
| "statistics": stats, |
| "detailed_results": evaluation_results |
| } |
|
|
| |
| def evaluate_R_Selection(self, graph_data, extracted_answers): |
| """ |
| Evaluate whether the selected filtration method is correct based on method_dict. |
| |
| Args: |
| graph_data: List of graph data entries, where each entry is a tuple (graph, ...) and graph.method_dict is a dict |
| extracted_answers: List of dicts with key 'selected_method' |
| |
| Returns: |
| accuracy: float |
| result_summary: dict with statistics and detailed evaluation results |
| """ |
| correct_count = 0 |
| total_count = len(extracted_answers) |
| evaluation_results = [] |
|
|
| for i, answer in enumerate(extracted_answers): |
| if i >= len(graph_data): |
| break |
|
|
| method_dict = { |
| 'weight': graph_data[i][0]['method_weight'], |
| 'degree': graph_data[i][0]['method_degree'], |
| 'betweenness': graph_data[i][0]['method_betweenness'], |
| 'k_shell': graph_data[i][0]['method_k_shell'], |
| 'closeness': graph_data[i][0]['method_closeness'], |
| 'eigenvector': graph_data[i][0]['method_eigenvector'] |
| } |
|
|
| if "error" in answer or "selected_method" not in answer: |
| evaluation_results.append({ |
| "index": i, |
| "is_correct": False, |
| "predicted_method": answer.get("selected_method", None), |
| "expected_methods": [k for k, v in method_dict.items() if v], |
| "reason": "No valid method extracted" |
| }) |
| continue |
| predicted_method = answer.get("selected_method") |
|
|
| if predicted_method not in method_dict: |
| return {"error": f"Invalid method selected: {predicted_method}"} |
|
|
| is_correct = bool(method_dict[predicted_method]) |
|
|
| if is_correct: |
| correct_count += 1 |
|
|
| evaluation_results.append({ |
| "index": i, |
| "is_correct": is_correct, |
| "predicted_method": predicted_method, |
| "expected_methods": [k for k, v in method_dict.items() if v] |
| }) |
|
|
| accuracy = correct_count / total_count if total_count > 0 else 0.0 |
|
|
| stats = { |
| "total_samples": total_count, |
| "correct_count": correct_count, |
| "wrong_count": total_count - correct_count, |
| "accuracy": accuracy |
| } |
|
|
| return accuracy, { |
| "statistics": stats, |
| "detailed_results": evaluation_results |
| } |
|
|
| def evaluate_R_Generation(self, graph_data, extracted_answers): |
| """ |
| Evaluate predictions based on filtration_values using check_filt_value(). |
| |
| Args: |
| graph_data: List of graph data objects |
| extracted_answers: List of dicts with key 'filtration_values' |
| |
| Returns: |
| accuracy: float |
| result_summary: dict with statistics and detailed evaluation results |
| """ |
| correct_count = 0 |
| total_count = len(extracted_answers) |
| evaluation_results = [] |
|
|
| for i, answer in enumerate(extracted_answers): |
| if i >= len(graph_data): |
| break |
|
|
| if "error" in answer or "filtration_values" not in answer: |
| evaluation_results.append({ |
| "index": i, |
| "is_correct": False, |
| "predicted_values": answer.get("filtration_values", None), |
| "reason": "No valid filtration_values extracted" |
| }) |
| continue |
|
|
| filtration_values = answer["filtration_values"] |
|
|
| is_correct,distances = check_graph_group(graph_data[i], method='weight',pre_calculate=False,filt_value=filtration_values) |
| |
| if is_correct: |
| correct_count += 1 |
| correct = "True" |
| else: |
| correct = "False" |
| evaluation_results.append({ |
| "index": i, |
| "is_correct": correct, |
| "predicted_values": filtration_values, |
| "correct": correct |
| }) |
|
|
| accuracy = correct_count / total_count if total_count > 0 else 0.0 |
|
|
| stats = { |
| "total_samples": total_count, |
| "correct_count": correct_count, |
| "wrong_count": total_count - correct_count, |
| "accuracy": accuracy |
| } |
|
|
| return accuracy, { |
| "statistics": stats, |
| "detailed_results": evaluation_results |
| } |
|
|