Search is not available for this dataset
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End of preview. Expand in Data Studio
Dataset Card for PillarCorpus-single-cell
Dataset Details
Dataset Description
PillarCorpus includes over 90M single-cell RNA sequencing (scRNA-seq) profiles spanning human and mouse samples. This dataset covers multiple disease conditions and tissue types from various publicly available sources.
- Curated by: (QiuLab)[https://www.devo-evo.com/]
- License: MIT
Uses
The dataset has contains the following columns:
gene_ids:Stored as list of integer codes that reference an internal vocabulary mapping to gene names or identifiers.
Typically follows standard nomenclature (e.g., HGNC for human genes, MGI for mouse genes).
Enables consistent and memory-efficient representation across the dataset.
gene_values- Refer to the gene expression counts, this is raw count integer corresponding to each gene in
gene_ids.
- Refer to the gene expression counts, this is raw count integer corresponding to each gene in
tissue:- Encoded as indices that map to a vocabulary of tissue types.
cell_type:- Represented by numeric codes that refer to descriptive categories in the vocabulary.
- Categories include types like
T cellsandB cellsetc.
assay:- Uses integer indices to point to assay names or experimental techniques in the vocabulary.
Dataset Creation
Source Data
The dataset originates from numerous research labs depositing their scRNA-seq studies in repositories such as Cellxgene. We extracted the metadata labels, such as sequencing assay types, from the data description.
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