| --- |
| license: cdla-permissive-2.0 |
| task_categories: |
| - tabular-classification |
| pretty_name: PT-Mush21 |
| tags: |
| - tabular |
| - metabolomics |
| - classification |
| - Biomedical |
| - Benchmark |
| - mass-spectrometry |
| - volatile-organic-compounds |
| configs: |
| - config_name: PT-Mush21 |
| data_files: |
| - split: fold_0_train |
| path: data/fold_0/train.parquet |
| - split: fold_0_validation |
| path: data/fold_0/val.parquet |
| - split: fold_0_test |
| path: data/fold_0/test.parquet |
| - split: fold_1_train |
| path: data/fold_1/train.parquet |
| - split: fold_1_validation |
| path: data/fold_1/val.parquet |
| - split: fold_1_test |
| path: data/fold_1/test.parquet |
| - split: fold_2_train |
| path: data/fold_2/train.parquet |
| - split: fold_2_validation |
| path: data/fold_2/val.parquet |
| - split: fold_2_test |
| path: data/fold_2/test.parquet |
| - split: fold_3_train |
| path: data/fold_3/train.parquet |
| - split: fold_3_validation |
| path: data/fold_3/val.parquet |
| - split: fold_3_test |
| path: data/fold_3/test.parquet |
| - split: fold_4_train |
| path: data/fold_4/train.parquet |
| - split: fold_4_validation |
| path: data/fold_4/val.parquet |
| - split: fold_4_test |
| path: data/fold_4/test.parquet |
| dataset_info: |
| description: 'Mass spectrometry evaluation of samples of diverse species of fungi |
| (593 samples, 383 peaks, 50 batches). Multiclass classification (6 classes): classes |
| correspond to the condition of cultivation. S/P=1.55. Experimental details in |
| Telagathoti et al. Features are standard-scaled (StandardScaler). 5-fold cross-validation |
| splits are batch-aware: all samples sharing the same measurement batch (IDs field) |
| are kept together in the same fold to prevent data leakage from technical replicates |
| and batch effects.' |
| --- |
| |
