| --- |
| license: cdla-permissive-2.0 |
| task_categories: |
| - tabular-classification |
| pretty_name: cptac_survival |
| tags: |
| - tabular |
| - proteomics |
| - binary |
| - Biomedical |
| - Benchmark |
| - clinical |
| configs: |
| - config_name: cptac_survival |
| data_files: |
| - split: fold_0_train |
| path: data/fold_0/train.parquet |
| - split: fold_0_validation |
| path: data/fold_0/val.parquet |
| - split: fold_0_test |
| path: data/fold_0/test.parquet |
| - split: fold_1_train |
| path: data/fold_1/train.parquet |
| - split: fold_1_validation |
| path: data/fold_1/val.parquet |
| - split: fold_1_test |
| path: data/fold_1/test.parquet |
| - split: fold_2_train |
| path: data/fold_2/train.parquet |
| - split: fold_2_validation |
| path: data/fold_2/val.parquet |
| - split: fold_2_test |
| path: data/fold_2/test.parquet |
| - split: fold_3_train |
| path: data/fold_3/train.parquet |
| - split: fold_3_validation |
| path: data/fold_3/val.parquet |
| - split: fold_3_test |
| path: data/fold_3/test.parquet |
| - split: fold_4_train |
| path: data/fold_4/train.parquet |
| - split: fold_4_validation |
| path: data/fold_4/val.parquet |
| - split: fold_4_test |
| path: data/fold_4/test.parquet |
| dataset_info: |
| description: 'Sample-level binary classification task predicting survival status |
| in CPTAC UCEC patients. Features are quantitative mass-spectrometry proteomics |
| profiles (umich platform). Label: ''Survival status'' (1 = dead, 0 = alive). Missing |
| proteomic values are imputed with the per-protein column mean. Samples without |
| a recorded survival status are excluded.' |
| --- |
| |
