Datasets:
metadata
license: cdla-permissive-2.0
task_categories:
- tabular-regression
pretty_name: sc_bonemarrow_velocity_umap
tags:
- tabular
- singlecell
- multiregression
- Biomedical
- Benchmark
- rna-seq
- dynamic-transcriptomics
configs:
- config_name: sc_bonemarrow_velocity_umap
data_files:
- split: train
path: data/train.parquet
- split: validation
path: data/val.parquet
- split: test
path: data/test.parquet
dataset_info:
description: >-
Single-cell RNA-seq data from human bone marrow during haematopoiesis. The
bone marrow is the primary site of blood cell production, composed of
haematopoietic cells, marrow adipose tissue and supportive stromal cells.
The dataset was used to detect key landmarks of haematopoietic
differentiation and to identify transcription factors driving lineage fate
choice. The task is to predict the RNA velocity vector of each cell
projected onto the UMAP embedding, reflecting the direction and speed of
transcriptional change.