Datasets:
metadata
license: cdla-permissive-2.0
task_categories:
- tabular-regression
pretty_name: sc_dentategyrus_latenttime
tags:
- tabular
- singlecell
- regression
- Biomedical
- Benchmark
- rna-seq
- dynamic-transcriptomics
configs:
- config_name: sc_dentategyrus_latenttime
data_files:
- split: train
path: data/train.parquet
- split: validation
path: data/val.parquet
- split: test
path: data/test.parquet
dataset_info:
description: >-
Single-cell RNA-seq data from the developing mouse dentate gyrus (P12 and
P35) measured with 10x Genomics Chromium. The dentate gyrus is part of the
hippocampus involved in learning, episodic memory and spatial coding. The
dataset captures the granule cell lineage — neuroblasts differentiating into
granule cells — as well as distinct cell types such as Cajal-Retzius and
GABA cells. The task is to predict the latent time (pseudotime) of each cell
along the transcriptomic differentiation trajectory, inferred from RNA
velocity dynamics.