gsm
string
gse
string
published_gse
string
source_pipeline
string
source_release
string
platform
string
technology
string
organism
string
tissue
string
observation_unit
string
n_obs
int64
n_vars
int64
expression_state
string
verification
string
expression_sha256
string
coordinate_units
string
um_basis
string
um_per_unit
float64
has_spatial_um
bool
has_image
bool
image_stain
string
image_stain_basis
string
image_um_per_px
float64
image_registration
string
image_sha256
string
segmentation
string
molecules
string
molecules_use
string
flags
string
qc_flags
string
drop_features
string
review_decision
string
review_category
string
review_notes
string
content_group
string
group_kind
string
aliases
string
split
string
sample_dir
string
GSM5026932
GSE165141
GSE165141
sda-all
sda-all-v1.3.0
ST (legacy)
Spatial Transcriptomics
Mus musculus
liver tissue
spot
684
17,530
counts
VERIFIED
5485b7261c029dbe4f87474ea813552b2dff4e8d44d90b2c685a22dff0b85c7a
um
verified
1
false
false
null
GSM5026932
train
samples/GSE165141/GSM5026932
GSM5026933
GSE165141
GSE165141
sda-all
sda-all-v1.3.0
ST (legacy)
Spatial Transcriptomics
Mus musculus
liver tissue
spot
650
18,719
counts
VERIFIED
64f827fdc3e581891f04c4be85250ce2dc213e6f55f96418f1385bbd8c2af024
um
verified
1
false
false
null
GSM5026933
train
samples/GSE165141/GSM5026933
GSM5026934
GSE165141
GSE165141
sda-all
sda-all-v1.3.0
ST (legacy)
Spatial Transcriptomics
Mus musculus
liver tissue
spot
1,288
19,468
counts
VERIFIED
346da7429b7da6c38b7d54d166284ac639fc40953690ac26ffaedc30b5b8cf1e
um
verified
1
false
false
null
GSM5026934
train
samples/GSE165141/GSM5026934
GSM5026935
GSE165141
GSE165141
sda-all
sda-all-v1.3.0
ST (legacy)
Spatial Transcriptomics
Mus musculus
liver tissue
spot
487
19,871
counts
VERIFIED
3352daf1a9c9679157b7295633af01c76b80b43cd03b8f5e3fc69c74512e2a86
um
verified
1
false
false
null
GSM5026935
train
samples/GSE165141/GSM5026935
GSM5026936
GSE165141
GSE165141
sda-all
sda-all-v1.3.0
ST (legacy)
Spatial Transcriptomics
Mus musculus
liver tissue
spot
1,389
17,765
counts
VERIFIED
e2d35f66c70d89f2f4e8541707d811aba27d9445e5bf15588d762f8d51936163
um
verified
1
false
false
null
GSM5026936
train
samples/GSE165141/GSM5026936
GSM5026937
GSE165141
GSE165141
sda-all
sda-all-v1.3.0
ST (legacy)
Spatial Transcriptomics
Mus musculus
liver tissue
spot
487
19,882
counts
VERIFIED
886e7b8745aa4ef9a482b7a80b931b41aff4488ca032499d8d4aabca4e1e0ec8
um
verified
1
false
false
null
GSM5026937
train
samples/GSE165141/GSM5026937
GSM5026938
GSE165141
GSE165141
sda-all
sda-all-v1.3.0
ST (legacy)
Spatial Transcriptomics
Mus musculus
liver tissue
spot
648
16,366
counts
VERIFIED
462ca276cf5998661c517cbd0eeedcea759767f6f42b152e4e265ec5bdb6d9a0
um
verified
1
false
false
null
GSM5026938
train
samples/GSE165141/GSM5026938
GSM5026939
GSE165141
GSE165141
sda-all
sda-all-v1.3.0
ST (legacy)
Spatial Transcriptomics
Mus musculus
liver tissue
spot
626
17,499
counts
VERIFIED
4602ba6fa99747f661a3ae76a1d8489f45db3f5ae9c3292342bce6431994558a
um
verified
1
false
false
null
GSM5026939
train
samples/GSE165141/GSM5026939
GSM5026940
GSE165141
GSE165141
sda-all
sda-all-v1.3.0
ST (legacy)
Spatial Transcriptomics
Mus musculus
liver tissue
spot
663
17,808
counts
VERIFIED
dd221d73e54f75a1fbb1cf27f07b93b73272b7f8dc9657dbaf1edea7c8d48452
um
verified
1
false
false
null
GSM5026940
train
samples/GSE165141/GSM5026940
GSM5026941
GSE165141
GSE165141
sda-all
sda-all-v1.3.0
ST (legacy)
Spatial Transcriptomics
Mus musculus
liver tissue
spot
629
17,504
counts
VERIFIED
b048ba887cf58456843e76480789bd9011dabbf01e4382bb995e75a5bfe75041
um
verified
1
false
false
null
GSM5026941
train
samples/GSE165141/GSM5026941
GSM5026942
GSE165141
GSE165141
sda-all
sda-all-v1.3.0
ST (legacy)
Spatial Transcriptomics
Mus musculus
liver tissue
spot
590
18,241
counts
VERIFIED
79277668a2f9a1217cbe416f84ce1f3fa4ab998b832871a8ca00fab25950e25d
um
verified
1
false
false
null
GSM5026942
train
samples/GSE165141/GSM5026942
GSM5089667
GSE166948+GSE166950
GSE166948
hesrt
hesrt-v1.3
Visium
10x Genomics Visium
Mus musculus
skin
spot
505
32,285
counts
human_visual_review
8a1486e119689d03cf2267966b91c58f5b2136c46a7776fdc54a79550540ec69
pixel
platform_constant
4.222012
true
true
H&E
HESRT human review
4.222012
HESRT_HUMAN_REVIEW
9b24d9dd638cc0b3d7c5784ebf226fcf52af54dccb99b54e0552adef0351cf4c
GSM5089667
val
samples/GSE166948/GSM5089667
GSM5089668
GSE166948+GSE166950
GSE166948
hesrt
hesrt-v1.3
Visium
10x Genomics Visium
Mus musculus
skin
spot
478
31,053
counts
human_visual_review
2041b194c1195559d92ad799e42591f1aef73def359ac93f7c5f06d89b7f93cd
pixel
platform_constant
4.247917
true
true
H&E
HESRT human review
4.247917
HESRT_HUMAN_REVIEW
410f97bb229024113eb3780646afcedc0dc728c158e4b08c4ed1b5a6fe03796b
GSM5089668
val
samples/GSE166948/GSM5089668
GSM5089669
GSE166948+GSE166950
GSE166948
hesrt
hesrt-v1.3
Visium
10x Genomics Visium
Mus musculus
skin
spot
620
32,285
counts
human_visual_review
9c1ab357f8fab24306ed636517138455f4913482620031d025e0c7dbc4f07eeb
pixel
platform_constant
4.222012
true
true
H&E
HESRT human review
4.222012
HESRT_HUMAN_REVIEW
11a83cdc9cbd89509462c0be60cecd3e0128e4805b85f12e5274dac4cca60242
GSM5089669
val
samples/GSE166948/GSM5089669
GSM5089670
GSE166948+GSE166950
GSE166948
hesrt
hesrt-v1.3
Visium
10x Genomics Visium
Mus musculus
skin
spot
792
31,053
counts
human_visual_review
f46e92bcd4589c8bc47fec298d1f0e7b96b25d3b0fd660f19b576d9e6c6cd7f5
pixel
platform_constant
4.2375
true
true
H&E
HESRT human review
4.2375
HESRT_HUMAN_REVIEW
cfa1d3fc778f5cc7e96ea5d202a08c9d0e7d83e3d9655f8121bbb284168fc2af
GSM5089670
val
samples/GSE166948/GSM5089670
GSM5089671
GSE166948+GSE166950
GSE166948
hesrt
hesrt-v1.3
Visium
10x Genomics Visium
Mus musculus
skin
spot
881
32,285
counts
human_visual_review
130ad66b540179ffe48ed7055114b2e4d82df7138f316e0daf66b0f4cd1ddaf7
pixel
platform_constant
4.222012
true
true
H&E
HESRT human review
4.222012
HESRT_HUMAN_REVIEW
2e5e9c7944f273bfc5bc68326f7a7c5679e16a22d54f4e79ccf1b92ca5a19a94
GSM5089671
val
samples/GSE166948/GSM5089671
GSM5089672
GSE166948+GSE166950
GSE166948
hesrt
hesrt-v1.3
Visium
10x Genomics Visium
Mus musculus
skin
spot
633
32,285
counts
human_visual_review
61ee2941e0b0ce7a378686c23daa8118a39d3084fab059fdd6c64a25b89b02d2
pixel
platform_constant
4.222012
true
true
H&E
HESRT human review
4.222012
HESRT_HUMAN_REVIEW
bf2c51e5065034f8ba046cb913cc6914b9e4f2fecb587ef56a4d9d1e52bb804a
GSM5089672
val
samples/GSE166948/GSM5089672
GSM5173925
GSE169012
GSE169012
sda-all
sda-all-v1.3.0
Slide-seq
Slide-seq
Mus musculus
Main olfactory bulb
bead
30,827
21,354
counts
VERIFIED
4e4d4d0175200de8f7ad8bb67488978001f82298a4c3c4688b4127c7084fc503
pixel
unresolved
null
false
false
null
GSM5173925
train
samples/GSE169012/GSM5173925
GSM5173926
GSE169012
GSE169012
sda-all
sda-all-v1.3.0
Slide-seq
Slide-seq
Mus musculus
Main olfactory bulb
bead
35,355
21,645
counts
VERIFIED
09884fdf1818bef56a60db900c26dd1a009e45f739e9dc35f2e43889a3bbe5fc
pixel
unresolved
null
false
false
null
GSM5173926
train
samples/GSE169012/GSM5173926
GSM5173927
GSE169012
GSE169012
sda-all
sda-all-v1.3.0
Slide-seq
Slide-seq
Mus musculus
Main olfactory bulb
bead
40,365
22,068
counts
VERIFIED
2e7da52ea107cf4e379986752d3a60a30b27cd3d7688a778ca015f5a2841a909
pixel
unresolved
null
false
false
null
GSM5173927
train
samples/GSE169012/GSM5173927
GSM5173928
GSE169012
GSE169012
sda-all
sda-all-v1.3.0
Slide-seq
Slide-seq
Mus musculus
Main olfactory bulb
bead
43,840
22,019
counts
VERIFIED
1ee3123b6db966a76fb9f437a595268f8fdf4eead80def04e8bfc0083098e605
pixel
unresolved
null
false
false
null
GSM5173928
train
samples/GSE169012/GSM5173928
GSM5173929
GSE169012
GSE169012
sda-all
sda-all-v1.3.0
Slide-seq
Slide-seq
Mus musculus
Main olfactory bulb
bead
55,086
22,170
counts
VERIFIED
5e918806d24ce568d056f7a5de2a2a2f41cff025f4fec993e4bb8bd38d4a89d6
pixel
unresolved
null
false
false
null
GSM5173929
train
samples/GSE169012/GSM5173929
GSM5173930
GSE169012
GSE169012
sda-all
sda-all-v1.3.0
Slide-seq
Slide-seq
Mus musculus
Main olfactory bulb
bead
52,364
21,997
counts
VERIFIED
b2448dd18a9a26133034b00dfa37f7ff484c0891d2cba4270719a07dbf40216c
pixel
unresolved
null
false
false
null
GSM5173930
train
samples/GSE169012/GSM5173930
GSM5173931
GSE169012
GSE169012
sda-all
sda-all-v1.3.0
Slide-seq
Slide-seq
Mus musculus
Main olfactory bulb
bead
49,682
21,651
counts
VERIFIED
bd7a7c9cc714a3caf06f4c3c076c90369fd8dae03807b4c367abde0389b8ebea
pixel
unresolved
null
false
false
null
GSM5173931
train
samples/GSE169012/GSM5173931
GSM5173932
GSE169012
GSE169012
sda-all
sda-all-v1.3.0
Slide-seq
Slide-seq
Mus musculus
Main olfactory bulb
bead
47,024
21,646
counts
VERIFIED
07edf3e0cf136d13c2efc4cd55745ef9844a663c1de9bce6cbc667d069b119a6
pixel
unresolved
null
false
false
null
GSM5173932
train
samples/GSE169012/GSM5173932
GSM5173933
GSE169012
GSE169012
sda-all
sda-all-v1.3.0
Slide-seq
Slide-seq
Mus musculus
Main olfactory bulb
bead
56,016
21,957
counts
VERIFIED
f19bf73445df339ce030dcf2f7464184705060fc73b3659a4cedacb08cdfa531
pixel
unresolved
null
false
false
null
GSM5173933
train
samples/GSE169012/GSM5173933
GSM5173934
GSE169012
GSE169012
sda-all
sda-all-v1.3.0
Slide-seq
Slide-seq
Mus musculus
Main olfactory bulb
bead
47,249
22,167
counts
VERIFIED
24433bf3847f80dd3824454646bc352a5ce643b1831138f300838b71e422b750
pixel
unresolved
null
false
false
null
GSM5173934
train
samples/GSE169012/GSM5173934
GSM5173935
GSE169012
GSE169012
sda-all
sda-all-v1.3.0
Slide-seq
Slide-seq
Mus musculus
Main olfactory bulb
bead
53,359
22,428
counts
VERIFIED
fcb8a456ebc320a5cd13cd10c57926a16a0f578ff25ebd14ab269e2d0b426a21
pixel
unresolved
null
false
false
null
GSM5173935
train
samples/GSE169012/GSM5173935
GSM5173936
GSE169012
GSE169012
sda-all
sda-all-v1.3.0
Slide-seq
Slide-seq
Mus musculus
Main olfactory bulb
bead
49,049
22,003
counts
VERIFIED
b4390f954f46105a9ded6550ec23b2533ddab3d2c2322f4d7a4668bb3db982e0
pixel
unresolved
null
false
false
null
GSM5173936
train
samples/GSE169012/GSM5173936
GSM5173937
GSE169012
GSE169012
sda-all
sda-all-v1.3.0
Slide-seq
Slide-seq
Mus musculus
Main olfactory bulb
bead
47,076
22,771
counts
VERIFIED
a2859619bf76c79f770fe0841a4bdc7a4275bf55c12c0569eb5bb12d0f579856
pixel
unresolved
null
false
false
null
GSM5173937
train
samples/GSE169012/GSM5173937
GSM5173938
GSE169012
GSE169012
sda-all
sda-all-v1.3.0
Slide-seq
Slide-seq
Mus musculus
Main olfactory bulb
bead
45,479
22,199
counts
VERIFIED
7b1c196b015e396b8c78f25814464c2b6bd9f6a51d3c0c352fba84d05fa1d51a
pixel
unresolved
null
false
false
null
GSM5173938
train
samples/GSE169012/GSM5173938
GSM5173939
GSE169012
GSE169012
sda-all
sda-all-v1.3.0
Slide-seq
Slide-seq
Mus musculus
Main olfactory bulb
bead
46,893
21,826
counts
VERIFIED
7d50849ee1fed61edd99e6a8a74867666d514d9c59ae00fa54114fc91221a071
pixel
unresolved
null
false
false
null
GSM5173939
train
samples/GSE169012/GSM5173939
GSM5173940
GSE169012
GSE169012
sda-all
sda-all-v1.3.0
Slide-seq
Slide-seq
Mus musculus
Main olfactory bulb
bead
49,717
21,815
counts
VERIFIED
5f9e4319500acc0fe4680fbfcd9346e23b89b043b1e8625a14986ec0bd904ec2
pixel
unresolved
null
false
false
null
GSM5173940
train
samples/GSE169012/GSM5173940
GSM5173941
GSE169012
GSE169012
sda-all
sda-all-v1.3.0
Slide-seq
Slide-seq
Mus musculus
Main olfactory bulb
bead
43,088
21,809
counts
VERIFIED
7021db7d909ed61287086114e55e32940eb2fab9cca11ca3fb5432e6877a49be
pixel
unresolved
null
false
false
null
GSM5173941
train
samples/GSE169012/GSM5173941
GSM5173942
GSE169012
GSE169012
sda-all
sda-all-v1.3.0
Slide-seq
Slide-seq
Mus musculus
Main olfactory bulb
bead
50,225
21,641
counts
VERIFIED
fae0d228bece79c202033a37bb94ab12f8d743750fd4652d2d30219a0db2a78c
pixel
unresolved
null
false
false
null
GSM5173942
train
samples/GSE169012/GSM5173942
GSM5173943
GSE169012
GSE169012
sda-all
sda-all-v1.3.0
Slide-seq
Slide-seq
Mus musculus
Main olfactory bulb
bead
52,795
21,602
counts
VERIFIED
6ddf84b2f1f2353b3c1df0aee5bdd633042cd6c9b1288f7527698b26da2e94ff
pixel
unresolved
null
false
false
null
GSM5173943
train
samples/GSE169012/GSM5173943
GSM5173944
GSE169012
GSE169012
sda-all
sda-all-v1.3.0
Slide-seq
Slide-seq
Mus musculus
Main olfactory bulb
bead
51,450
21,434
counts
VERIFIED
cefb32ebe1238d7cc165fefbded1eff2fa346db19106509001d05d0df41b66ec
pixel
unresolved
null
false
false
null
GSM5173944
train
samples/GSE169012/GSM5173944
GSM5173945
GSE169012
GSE169012
sda-all
sda-all-v1.3.0
Slide-seq
Slide-seq
Mus musculus
Main olfactory bulb
bead
30,041
20,479
counts
VERIFIED
10526edb48b5c079b0d1a7a2a1c0bde7b853d785c3d3c086b11c5795b2633914
pixel
unresolved
null
false
false
null
GSM5173945
train
samples/GSE169012/GSM5173945
GSM5173946
GSE169012
GSE169012
sda-all
sda-all-v1.3.0
Slide-seq
Slide-seq
Mus musculus
Main olfactory bulb
bead
34,997
20,701
counts
VERIFIED
bc30af45726ed5e1d44f3752733365187e6efa84604ef6f11e798b011af18db9
pixel
unresolved
null
false
false
null
GSM5173946
train
samples/GSE169012/GSM5173946
GSM5173947
GSE169012
GSE169012
sda-all
sda-all-v1.3.0
Slide-seq
Slide-seq
Mus musculus
Main olfactory bulb
bead
41,337
21,506
counts
VERIFIED
900372a1033654ac2b4b88864ef3c50fd68f909055f10e544063c23d81302bbf
pixel
unresolved
null
false
false
null
GSM5173947
train
samples/GSE169012/GSM5173947
GSM5173948
GSE169012
GSE169012
sda-all
sda-all-v1.3.0
Slide-seq
Slide-seq
Mus musculus
Main olfactory bulb
bead
46,648
21,487
counts
VERIFIED
de362dc36e5c849a0e56477ad894dea66c74a3acd993eb8a43987c4d97ade332
pixel
unresolved
null
false
false
null
GSM5173948
train
samples/GSE169012/GSM5173948
GSM5173949
GSE169012
GSE169012
sda-all
sda-all-v1.3.0
Slide-seq
Slide-seq
Mus musculus
Main olfactory bulb
bead
42,455
21,533
counts
VERIFIED
d83b0b7f40d6a51b8f4d03138c71bb7310c4becf7dcd1764e82f317fdcd13d6e
pixel
unresolved
null
false
false
null
GSM5173949
train
samples/GSE169012/GSM5173949
GSM5173950
GSE169012
GSE169012
sda-all
sda-all-v1.3.0
Slide-seq
Slide-seq
Mus musculus
Main olfactory bulb
bead
50,483
21,787
counts
VERIFIED
5ce255c9d37fadd91cdc85426337d172b6c87d87fa29bd0acaaf062ef4d1f86a
pixel
unresolved
null
false
false
null
GSM5173950
train
samples/GSE169012/GSM5173950
GSM5173951
GSE169012
GSE169012
sda-all
sda-all-v1.3.0
Slide-seq
Slide-seq
Mus musculus
Main olfactory bulb
bead
49,562
21,767
counts
VERIFIED
7a872e5d0df2c56b7d35fb3086ecdf328d1bbd0e13494e8a5f1a8c9e2dd84a74
pixel
unresolved
null
false
false
null
GSM5173951
train
samples/GSE169012/GSM5173951
GSM5173952
GSE169012
GSE169012
sda-all
sda-all-v1.3.0
Slide-seq
Slide-seq
Mus musculus
Main olfactory bulb
bead
45,535
21,398
counts
VERIFIED
5deb630fdf7acb6c34f0c32d6b848d12b3198bcf894ac5859465aa488fdb54fb
pixel
unresolved
null
false
false
null
GSM5173952
train
samples/GSE169012/GSM5173952
GSM5173953
GSE169012
GSE169012
sda-all
sda-all-v1.3.0
Slide-seq
Slide-seq
Mus musculus
Main olfactory bulb
bead
39,903
21,738
counts
VERIFIED
14c7043f02fc1afc289946496729c66779aa84d1954a4b5b81f0bae307d6b33a
pixel
unresolved
null
false
false
null
GSM5173953
train
samples/GSE169012/GSM5173953
GSM5173954
GSE169012
GSE169012
sda-all
sda-all-v1.3.0
Slide-seq
Slide-seq
Mus musculus
Main olfactory bulb
bead
37,956
21,660
counts
VERIFIED
898b08c2036b7440d79fc420055683c72ee25812200799bf261d187a78036bba
pixel
unresolved
null
false
false
null
GSM5173954
train
samples/GSE169012/GSM5173954
GSM5173955
GSE169012
GSE169012
sda-all
sda-all-v1.3.0
Slide-seq
Slide-seq
Mus musculus
Main olfactory bulb
bead
41,202
21,653
counts
VERIFIED
9b0ee89ca4dcc3430dd8ca8360ae9b99368f4c2a74f9657810dc57725f82f4d9
pixel
unresolved
null
false
false
null
GSM5173955
train
samples/GSE169012/GSM5173955
GSM5173956
GSE169012
GSE169012
sda-all
sda-all-v1.3.0
Slide-seq
Slide-seq
Mus musculus
Main olfactory bulb
bead
44,306
21,673
counts
VERIFIED
046cb5434549ddf99b8c3275e9b326c27816739c17c0f816f766d12221dec7d0
pixel
unresolved
null
false
false
null
GSM5173956
train
samples/GSE169012/GSM5173956
GSM5173957
GSE169012
GSE169012
sda-all
sda-all-v1.3.0
Slide-seq
Slide-seq
Mus musculus
Main olfactory bulb
bead
38,022
21,766
counts
VERIFIED
f0ebca7163e6ad1a884b506e0d6d40f95a0ffc384c01c5c02d2a8fb09420584d
pixel
unresolved
null
false
false
null
GSM5173957
train
samples/GSE169012/GSM5173957
GSM5173958
GSE169012
GSE169012
sda-all
sda-all-v1.3.0
Slide-seq
Slide-seq
Mus musculus
Main olfactory bulb
bead
49,988
21,931
counts
VERIFIED
43600db91f46cfe720a5855433b992d1f5069f91cdfb8a36e33b9b30864ddafb
pixel
unresolved
null
false
false
null
GSM5173958
train
samples/GSE169012/GSM5173958
GSM5173959
GSE169012
GSE169012
sda-all
sda-all-v1.3.0
Slide-seq
Slide-seq
Mus musculus
Main olfactory bulb
bead
49,694
22,051
counts
VERIFIED
fad2da7923cd1a04c09b93a43e42cf158f4a81e344890794790e78fdc35125d3
pixel
unresolved
null
false
false
null
GSM5173959
train
samples/GSE169012/GSM5173959
GSM5173960
GSE169012
GSE169012
sda-all
sda-all-v1.3.0
Slide-seq
Slide-seq
Mus musculus
Main olfactory bulb
bead
51,734
22,004
counts
VERIFIED
d6e3cb603f254f706690282dcd3f7e4378776417a8c49b9de6057e58784a6816
pixel
unresolved
null
false
false
null
GSM5173960
train
samples/GSE169012/GSM5173960
GSM5173961
GSE169012
GSE169012
sda-all
sda-all-v1.3.0
Slide-seq
Slide-seq
Mus musculus
Main olfactory bulb
bead
50,418
21,902
counts
VERIFIED
302e5cb17d871d1c829f4a6eec3ec5011d0defb6223d062a603d71fbb3da64cc
pixel
unresolved
null
false
false
null
GSM5173961
train
samples/GSE169012/GSM5173961
GSM5173962
GSE169012
GSE169012
sda-all
sda-all-v1.3.0
Slide-seq
Slide-seq
Mus musculus
Main olfactory bulb
bead
49,625
22,038
counts
VERIFIED
9c6bd62297e94c448632fcf3e674a40061890ac13681f2987ff9dec4f702989c
pixel
unresolved
null
false
false
null
GSM5173962
train
samples/GSE169012/GSM5173962
GSM5173963
GSE169012
GSE169012
sda-all
sda-all-v1.3.0
Slide-seq
Slide-seq
Mus musculus
Main olfactory bulb
bead
52,260
22,165
counts
VERIFIED
6242841edd93c537e23ee9dd591db7def02a55a2d29cfa11aca2191493d68c33
pixel
unresolved
null
false
false
null
GSM5173963
train
samples/GSE169012/GSM5173963
GSM5173964
GSE169012
GSE169012
sda-all
sda-all-v1.3.0
Slide-seq
Slide-seq
Mus musculus
Main olfactory bulb
bead
35,047
19,207
counts
VERIFIED
76521ef0072db9b3ae7ff39270141fdeeccb83aee25510d3e1db278b5feef989
pixel
unresolved
null
false
false
null
GSM5173964
train
samples/GSE169012/GSM5173964
GSM5213483
GSE169749
GSE169749
hesrt
hesrt-v1.3
Visium
10x Genomics Visium
Mus musculus
colon
spot
2,604
31,053
counts
human_visual_review
4f37569390d8afb22c512f8083bb6cbdd18d016b6fe8451dd3910e09b2eb692e
pixel
platform_constant
0.970874
true
true
H&E
HESRT human review
0.970874
HESRT_HUMAN_REVIEW
ba005aed0ae135972cf02fa7f087f88df122c8318b1f9deae15c4b35b50c0109
GSM5213483
train
samples/GSE169749/GSM5213483
GSM5213484
GSE169749
GSE169749
hesrt
hesrt-v1.3
Visium
10x Genomics Visium
Mus musculus
colon
spot
3,630
31,053
counts
human_visual_review
b49e8ad2eda9b3f8f74d677b7c8bf40f54cf92647ecea0abee614008b6370dcf
pixel
platform_constant
0.970874
true
true
H&E
HESRT human review
0.970874
HESRT_HUMAN_REVIEW
ca08e8ac58af067dbff9c86b51cf3656d6c0c8974406e6f862faed9cb703628a
GSM5213484
train
samples/GSE169749/GSM5213484
GSM5224027
GSE171351
GSE171351
hesrt
hesrt-v1.3
Visium
10x Genomics Visium
Homo sapiens
bladder
spot
768
33,538
counts
human_visual_review
766b2c87369b38c46401509892ec8ec93aff526f1541bb5054e4672145d5c5d7
pixel
platform_constant
0.487805
true
true
H&E
HESRT human review
0.500008
HESRT_HUMAN_REVIEW
1ac6c24f0f641533c34624ff6f8ccee19656f10d3da2d3041ca06d1314380cb7
GSM5224027
val
samples/GSE171351/GSM5224027
GSM5224028
GSE171351
GSE171351
hesrt
hesrt-v1.3
Visium
10x Genomics Visium
Homo sapiens
bladder
spot
1,017
33,538
counts
human_visual_review
46dd452c313653182caf96d9f021e42e0164ae4a48cea26a6d94a7b2af0e0b44
pixel
platform_constant
0.487805
true
true
H&E
HESRT human review
0.500008
HESRT_HUMAN_REVIEW
7444146d2e95cace9c83afd9e7c6c7ac4d2276988a6cf7ab214ed48499550e0c
GSM5224028
val
samples/GSE171351/GSM5224028
GSM5224029
GSE171351
GSE171351
hesrt
hesrt-v1.3
Visium
10x Genomics Visium
Homo sapiens
bladder
spot
1,469
33,538
counts
human_visual_review
cd7ba4544a3ba462df59c3b1127d22f929b7efde28099b96683f29d4115ac2bf
pixel
platform_constant
0.487805
true
true
H&E
HESRT human review
0.500008
HESRT_HUMAN_REVIEW
04a6263b33d8f27b266355cb8c1743a8587186f09913244ea82d49070fe93565
GSM5224029
val
samples/GSE171351/GSM5224029
GSM5224030
GSE171351
GSE171351
hesrt
hesrt-v1.3
Visium
10x Genomics Visium
Homo sapiens
bladder
spot
832
33,538
counts
human_visual_review
49a8d7673baa02ff295a5c62256c2e1467d70888bf3a018232c1950f5cbfae39
pixel
platform_constant
0.487805
true
true
H&E
HESRT human review
0.500007
HESRT_HUMAN_REVIEW
99c3fce0d2a97e8edadc9506979b07de38269e9cd1f7688841413e5fd671c310
GSM5224030
val
samples/GSE171351/GSM5224030
GSM5224978
GSE171406
GSE171406
hesrt
hesrt-v1.3
Visium
10x Genomics Visium
Homo sapiens
kidney
spot
3,007
33,538
counts
human_visual_review
a91fcc187bd8b176d01d9282e7e65b6841f14505947636332a62937121ea9f24
pixel
platform_constant
0.757576
true
true
H&E
HESRT human review
0.757576
HESRT_HUMAN_REVIEW
c4a1cfc9fc6963ce999fde24b9afd61e6c27d56479d9efe823fe5ce13a9e3c8f
CG-96e459c3bbd8
cross_gse_redeposit
GSM6047774
train
samples/GSE171406/GSM5224978
GSM5224979
GSE171406
GSE171406
hesrt
hesrt-v1.3
Visium
10x Genomics Visium
Mus musculus
kidney
spot
1,835
31,053
counts
human_visual_review
777f7e28ce99bc82bc9a94c33cb7cfabec142c1dc9266021d77381220004f859
pixel
platform_constant
0.757576
true
true
H&E
HESRT human review
0.757576
HESRT_HUMAN_REVIEW
41547e74a00d3681a06f3b13722bb705b007af75bebc52bc4efa1d76949530d2
GSM5224979
train
samples/GSE171406/GSM5224979
GSM5224980
GSE171406
GSE171406
hesrt
hesrt-v1.3
Visium
10x Genomics Visium
Mus musculus
kidney
spot
2,064
31,053
counts
human_visual_review
8cf463adbd8f06bb1c769a7895e83ca0e915fe026a311e7bebf43d8e107d11f2
pixel
platform_constant
0.757576
true
true
H&E
HESRT human review
0.757576
HESRT_HUMAN_REVIEW
69d949ff48ec8412686af1e1e81b03c0950268874bf675507ea6fac7e1c59c3e
GSM5224980
train
samples/GSE171406/GSM5224980
GSM5255579
GSE172416
GSE172416
hesrt
hesrt-v1.3
Visium
10x Genomics Visium
Homo sapiens
lung
spot
1,591
36,601
counts
human_visual_review
e4321a19a462e28ab70e692176276167b97b20f4378af3dcebd4bc52da2b1626
pixel
platform_constant
3.937069
true
true
H&E
HESRT human review
3.937069
HESRT_HUMAN_REVIEW
34e9989e05f3a9fd64ac74a8cc8ea3a2d4bb8c42664f24c13707c32f6984394a
GSM5255579
val
samples/GSE172416/GSM5255579
GSM5255580
GSE172416
GSE172416
hesrt
hesrt-v1.3
Visium
10x Genomics Visium
Homo sapiens
lung
spot
2,683
36,601
counts
human_visual_review
450cb556f4be334c3c114468a1bb581477cdcc33a39796c19423b4f1c1583ec3
pixel
platform_constant
4.005459
true
true
H&E
HESRT human review
4.005459
HESRT_HUMAN_REVIEW
ac7b45452ee2d6998c37fcd79d13c82661c1c4ea7f18411f4a324f2167685fea
GSM5255580
val
samples/GSE172416/GSM5255580
GSM5273010
GSE173651
GSE173651
hesrt
hesrt-v1.3
Visium
10x Genomics Visium
Homo sapiens
skin
spot
2,260
33,538
counts
human_visual_review
7fb726e07c2722316fc92fc08657307afa68641fca4c4c34c63a3a03e57c35bb
pixel
platform_constant
4.193104
true
true
H&E
HESRT human review
4.193104
HESRT_HUMAN_REVIEW
8a4b71aed48668d8e137d199518151d8f6ea44df656a0d74b18829f919076af9
GSM5273010
train
samples/GSE173651/GSM5273010
GSM5273011
GSE173651
GSE173651
hesrt
hesrt-v1.3
Visium
10x Genomics Visium
Homo sapiens
skin
spot
2,692
33,538
counts
human_visual_review
ce62c674fa51a439cf59d94d4b6984cf7220449ca4ca891492ad59410f19c6c1
pixel
platform_constant
4.193104
true
true
H&E
HESRT human review
4.193104
HESRT_HUMAN_REVIEW
47f36f89c52df4da107d0e6181cf3f09c9f49b06a4ea55c7ee295d8cd4d2e813
GSM5273011
train
samples/GSE173651/GSM5273011
GSM5273012
GSE173651
GSE173651
hesrt
hesrt-v1.3
Visium
10x Genomics Visium
Homo sapiens
skin
spot
1,869
33,538
counts
human_visual_review
2b179d38553e1267a437d8ced25aa96740846b2ffea9ca021e2da339054f59b0
pixel
platform_constant
4.193104
true
true
H&E
HESRT human review
4.193104
HESRT_HUMAN_REVIEW
6a4d66a6571c86f66d6517da8897cbf707cb71d38f69249e10e7e6b9ab86ae80
GSM5273012
train
samples/GSE173651/GSM5273012
GSM5273013
GSE173651
GSE173651
hesrt
hesrt-v1.3
Visium
10x Genomics Visium
Homo sapiens
skin
spot
3,354
33,538
counts
human_visual_review
e153ab49c3cd32ee9c6dc5f82bfdd7549ae88d6a17705b01ec27c551b30c2f4f
pixel
platform_constant
4.193104
true
true
H&E
HESRT human review
4.193104
HESRT_HUMAN_REVIEW
d9f025c3307d5adf4da9ffa4bee0750f83756e5d7f2f6d9838f06f2640cf6a1e
GSM5273013
train
samples/GSE173651/GSM5273013
GSM5273014
GSE173651
GSE173651
hesrt
hesrt-v1.3
Visium
10x Genomics Visium
Homo sapiens
skin
spot
2,333
33,538
counts
human_visual_review
8b249965a438724092f691a1c8783fe0ad420149a25177f71be1eac1ff3f6856
pixel
platform_constant
4.148851
true
true
H&E
HESRT human review
4.148851
HESRT_HUMAN_REVIEW
66ce516fd6d2147601abbae9295e85b75d3686204dd189a2183e8f93f55d4d64
GSM5273014
train
samples/GSE173651/GSM5273014
GSM5273015
GSE173651
GSE173651
hesrt
hesrt-v1.3
Visium
10x Genomics Visium
Homo sapiens
skin
spot
2,516
33,538
counts
human_visual_review
fd97b6b610528920688d083a495aa50d0e886863e24c7b6c4b91a2d98fb81f90
pixel
platform_constant
4.148851
true
true
H&E
HESRT human review
4.148851
HESRT_HUMAN_REVIEW
48e4a1c417f079d54e95159070a16f961962c820af35e64c25ad1a89325a1092
GSM5273015
train
samples/GSE173651/GSM5273015
GSM6443458
GSE174265
GSE174265
sda-all
sda-all-v1.5.0
Visium
Visium
Mus musculus
brain
spot
2,616
32,285
counts
VERIFIED
f3687f48f0e161d121e49bad56d26d74bc14358d22041dbc5e5a14b38b613726
um
verified
1
false
false
null
GSM6443458
train
samples/GSE174265/GSM6443458
GSM6443459
GSE174265
GSE174265
sda-all
sda-all-v1.5.0
Visium
Visium
Mus musculus
brain
spot
2,303
32,285
counts
VERIFIED
29be173af1f29b42b7459310b2278ed4c559839ec2bebc183a3685733379c126
um
verified
1
false
false
null
GSM6443459
train
samples/GSE174265/GSM6443459
GSM6443460
GSE174265
GSE174265
sda-all
sda-all-v1.5.0
Visium
Visium
Mus musculus
brain
spot
2,438
32,285
counts
VERIFIED
4bf2d9251e125a839e2d0d026ddef3c0ddcde29193ec62898f8049cf0cbb5d99
um
verified
1
false
false
null
GSM6443460
train
samples/GSE174265/GSM6443460
GSM6443461
GSE174265
GSE174265
sda-all
sda-all-v1.5.0
Visium
Visium
Mus musculus
brain
spot
2,490
32,285
counts
VERIFIED
0a492b581528a80cda6b6a0208465fa53618a0bedf31efbe22f04c1cde1143ff
um
verified
1
false
false
null
GSM6443461
train
samples/GSE174265/GSM6443461
GSM6443462
GSE174265
GSE174265
sda-all
sda-all-v1.5.0
Visium
Visium
Mus musculus
brain
spot
2,624
32,285
counts
VERIFIED
1f6b101b6d4704a669274352eb9c0b8f45531c688e114c3a8d840a133860fe6a
um
verified
1
false
false
null
GSM6443462
train
samples/GSE174265/GSM6443462
GSM6443463
GSE174265
GSE174265
sda-all
sda-all-v1.5.0
Visium
Visium
Mus musculus
brain
spot
2,550
32,285
counts
VERIFIED
d03d2efcb230fb4330038e239469f99aba10b5d83f81430d0dbae1a8ee618d06
um
verified
1
false
false
null
GSM6443463
train
samples/GSE174265/GSM6443463
GSM6443464
GSE174265
GSE174265
sda-all
sda-all-v1.5.0
Visium
Visium
Mus musculus
brain
spot
2,559
32,285
counts
VERIFIED
47d1bbc53572394d4243f9730cda0990ca12b519b3d0a3666dd2153fa50ad174
um
verified
1
false
false
null
GSM6443464
train
samples/GSE174265/GSM6443464
GSM5291683
GSE174313
GSE174313
hesrt
hesrt-v1.3
Visium
10x Genomics Visium
Mus musculus
Sagittal suture
spot
423
31,053
counts
human_visual_review
e37dc7a1f0095fd4fb3490d350f7b82d4c60106864b6e0bdadc191fa0cbc9f33
pixel
platform_constant
4.081395
true
true
H&E
HESRT human review
4.081395
HESRT_HUMAN_REVIEW
c5c8ecc8ad19a792b284385e190aaaa7291bce716b4482e4c8841982abbfb838
GSM5291683
train
samples/GSE174313/GSM5291683
GSM5291684
GSE174313
GSE174313
hesrt
hesrt-v1.3
Visium
10x Genomics Visium
Mus musculus
Sagittal suture
spot
363
31,053
counts
human_visual_review
e1fba1e8f5e8c7d5bc81793e211417fff92e64a5fa0191eaaacad0a524349a4a
pixel
platform_constant
3.988372
true
true
H&E
HESRT human review
3.988372
HESRT_HUMAN_REVIEW
a5c016184ebe3d97a48fd2390fabfef90fe6b974d34b911e62341cddb60d3a20
GSM5291684
train
samples/GSE174313/GSM5291684
GSM5291685
GSE174313
GSE174313
hesrt
hesrt-v1.3
Visium
10x Genomics Visium
Mus musculus
Sagittal suture
spot
560
31,053
counts
human_visual_review
2d4e314637cbddd33d21ce213a251e71e32eb4038886a64e58e40b73cc3781fa
pixel
platform_constant
4.049419
true
true
H&E
HESRT human review
4.049419
HESRT_HUMAN_REVIEW
a857b2f055c60feb00649179a2d00b674bf167b98c6dd9cfa5c5897e3fb43388
GSM5291685
train
samples/GSE174313/GSM5291685
GSM5291686
GSE174313
GSE174313
hesrt
hesrt-v1.3
Visium
10x Genomics Visium
Mus musculus
Sagittal suture
spot
324
31,053
counts
human_visual_review
1e35c16188bb12e6f06c3865fa12219446679c7192fef21ddbe24ebd8de37fc3
pixel
platform_constant
3.981977
true
true
H&E
HESRT human review
3.981977
HESRT_HUMAN_REVIEW
be7e6b384dc328455819a96a5cff8562b3f5385aa537c49b9b50cf537f71dfee
GSM5291686
train
samples/GSE174313/GSM5291686
GSM5291792
GSE174321
GSE174321
hesrt
hesrt-v1.3
Visium
10x Genomics Visium
Mus musculus
brain
spot
2,420
32,285
counts
human_visual_review
f5c33e6c06386478c3a2f2f21afabec1ddb3f4f6a929df1cc1ba59b3ef8c7ebf
pixel
platform_constant
15.358586
true
true
H&E
HESRT human review
15.358586
HESRT_HUMAN_REVIEW
1e8ed6d4dd3c85d9e8592ff976026e89ac38f874fb85a20ea0acfb8f25102486
GSM5291792
train
samples/GSE174321/GSM5291792
GSM5291793
GSE174321
GSE174321
hesrt
hesrt-v1.3
Visium
10x Genomics Visium
Mus musculus
brain
spot
2,987
32,285
counts
human_visual_review
b2591b045f8526cbc5ea49aa15e705ceb5be425261d0af56d98e5de498af8526
pixel
platform_constant
15.358586
true
true
H&E
HESRT human review
15.358586
HESRT_HUMAN_REVIEW
cd6c1874285cd9e88433a18a44dad8148d9b62d6ef42473a025741a948b2da25
GSM5291793
train
samples/GSE174321/GSM5291793
GSM5291794
GSE174321
GSE174321
hesrt
hesrt-v1.3
Visium
10x Genomics Visium
Mus musculus
brain
spot
3,482
32,285
counts
human_visual_review
2b019672fcc6a38c2f53fc9c43c048be69dbffe52ca43b565f28537ac906a336
pixel
platform_constant
17.065656
true
true
H&E
HESRT human review
17.065656
HESRT_HUMAN_REVIEW
dee313d7721449d5141f6af1d2575c837bd204d298bb71fb1d60724368dc9eff
GSM5291794
train
samples/GSE174321/GSM5291794
GSM5291795
GSE174321
GSE174321
hesrt
hesrt-v1.3
Visium
10x Genomics Visium
Mus musculus
brain
spot
3,358
32,285
counts
human_visual_review
a5446a10f469285a0a8779e142604cd3c88a1a51091f90b2487c48921835ac17
pixel
platform_constant
18.772727
true
true
H&E
HESRT human review
18.772727
HESRT_HUMAN_REVIEW
e10500e888a73909d0f3a56e447d76f092f643114295885d3b35bfcda88f31ca
GSM5291795
train
samples/GSE174321/GSM5291795
GSM5321365
GSE174647
GSE174647
hesrt
hesrt-v1.3
ST (legacy)
Spatial Transcriptomics
Homo sapiens
brain cortex
spot
336
19,456
counts
human_visual_review
fbfce7cadb3fadc435e147fbd3e4581ba9be732bc542f9ef7397df41b7bc49d9
pixel
platform_constant
5.711955
true
true
H&E
HESRT human review
5.711955
HESRT_HUMAN_REVIEW
cc24370a5bf7bc3fa1d8a987759ceeb62aebf7db666c4ee1a71723aadcd28a6d
GSM5321365
test
samples/GSE174647/GSM5321365
GSM5321366
GSE174647
GSE174647
hesrt
hesrt-v1.3
ST (legacy)
Spatial Transcriptomics
Homo sapiens
brain cortex
spot
575
19,456
counts
human_visual_review
dcf1605f3120aac558ac8c66fd05f29689bddc17edae69dd1301ec770c8bf197
pixel
platform_constant
5.711955
true
true
H&E
HESRT human review
5.711955
HESRT_HUMAN_REVIEW
1db76f093a4b44963712b58b0e7ecf5bd48ff67112350300167eca8b82a42b30
GSM5321366
test
samples/GSE174647/GSM5321366
GSM5321367
GSE174647
GSE174647
hesrt
hesrt-v1.3
ST (legacy)
Spatial Transcriptomics
Homo sapiens
brain cortex
spot
703
19,456
counts
human_visual_review
a0e9dda4292f3cbe71b758a8356b2deebe5e59dd6d3846fe9c99e1a4a68b9bda
pixel
platform_constant
5.714286
true
true
H&E
HESRT human review
5.714286
HESRT_HUMAN_REVIEW
010cccdc2bf5bbf17ff8606c8b84003cac215a959934efc913e4b888511467d6
GSM5321367
test
samples/GSE174647/GSM5321367
GSM5321368
GSE174647
GSE174647
hesrt
hesrt-v1.3
ST (legacy)
Spatial Transcriptomics
Homo sapiens
brain cortex
spot
435
19,456
counts
human_visual_review
75fd973cc182a0e28aed74459716261db25bc76924ea0a1d851ac397bdf570be
pixel
platform_constant
5.711955
true
true
H&E
HESRT human review
5.711955
HESRT_HUMAN_REVIEW
6bc3307031ee2239017f2f57e9718d284f9849e287726e42ac7ef70066208f77
GSM5321368
test
samples/GSE174647/GSM5321368
GSM5321369
GSE174647
GSE174647
hesrt
hesrt-v1.3
ST (legacy)
Spatial Transcriptomics
Homo sapiens
brain cortex
spot
6
19,456
counts
human_visual_review
624e9cdd7ddead06e18a63953b6d721f5718a283a7ee6a5dd9033c3316a44b66
pixel
unresolved
null
false
true
H&E
HESRT human review
null
HESRT_HUMAN_REVIEW
8d043f7ec478d394036a8ece505d5fa03c545f255daef9473b05c9a86bd3c845
GSM5321369
test
samples/GSE174647/GSM5321369
GSM5321371
GSE174647
GSE174647
hesrt
hesrt-v1.3
ST (legacy)
Spatial Transcriptomics
Homo sapiens
brain cortex
spot
94
19,456
counts
human_visual_review
38a72252da37ddc097ace9522115f3933440d9b1c7294c3e2a45438baf2de58c
pixel
platform_constant
5.711955
true
true
H&E
HESRT human review
5.711955
HESRT_HUMAN_REVIEW
a224a6222e6456abc478390f02f5da6b23ae61f027f2f30aa79c391e440dfd89
GSM5321371
test
samples/GSE174647/GSM5321371
GSM5321372
GSE174647
GSE174647
hesrt
hesrt-v1.3
ST (legacy)
Spatial Transcriptomics
Homo sapiens
brain cortex
spot
872
19,456
counts
human_visual_review
e1d61f59d11c261e483e27c2afe58e664c01b4833a88898319928d98d696133e
pixel
platform_constant
5.711955
true
true
H&E
HESRT human review
5.711955
HESRT_HUMAN_REVIEW
95f4286b9fab39abf61a1b76076557e9c555f46f4c7afb14446e3d2b5a15dbb1
GSM5321372
test
samples/GSE174647/GSM5321372
GSM5321373
GSE174647
GSE174647
hesrt
hesrt-v1.3
ST (legacy)
Spatial Transcriptomics
Homo sapiens
brain cortex
spot
964
19,456
counts
human_visual_review
b00e8acb6c21461aecf9e62b8569f8f001b040a4190a4091154e1e0b97536414
pixel
platform_constant
5.711955
true
true
H&E
HESRT human review
5.711955
HESRT_HUMAN_REVIEW
160fc328e9f5ff018b02ce4eea6f3787fc9bc648177aebe7c4417648d1130b80
GSM5321373
test
samples/GSE174647/GSM5321373
GSM5321374
GSE174647
GSE174647
hesrt
hesrt-v1.3
ST (legacy)
Spatial Transcriptomics
Homo sapiens
brain cortex
spot
677
19,456
counts
human_visual_review
af11b942b9200fc9831816a3f81aee79cb91cc19b76ea8c9b93f297c5c8d9f8c
pixel
platform_constant
5.711955
true
true
H&E
HESRT human review
5.711955
HESRT_HUMAN_REVIEW
e37f3838be79a395b109ee48edb339c354a813a598eca7334dea85ed9a04dcee
GSM5321374
test
samples/GSE174647/GSM5321374
GSM5321375
GSE174647
GSE174647
hesrt
hesrt-v1.3
ST (legacy)
Spatial Transcriptomics
Homo sapiens
brain cortex
spot
355
19,456
counts
human_visual_review
060ec3e4cc65a2c357891390efb0b4b99b34f13fce6862e693e68f7134b028a4
pixel
platform_constant
5.711955
true
true
H&E
HESRT human review
5.711955
HESRT_HUMAN_REVIEW
5434179a7ce06cf0250b3a23bea917273f74beb9e33d51bd571be9f064dedc49
GSM5321375
test
samples/GSE174647/GSM5321375
GSM5321378
GSE174647
GSE174647
hesrt
hesrt-v1.3
ST (legacy)
Spatial Transcriptomics
Homo sapiens
brain cortex
spot
695
19,456
counts
human_visual_review
d74a569ac88dd2352027590b7e2ac70c5ff7ea08178bd987ac7434e1f9ef9891
pixel
platform_constant
5.872202
true
true
H&E
HESRT human review
5.872202
HESRT_HUMAN_REVIEW
9e0d57db14481ca2cb1e51bce5d87f16f8320d7bd299026bc8fc8ba69d7b592b
GSM5321378
test
samples/GSE174647/GSM5321378