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def patch_env(env, path, value):
""" Set specified value to yaml path.
Example:
patch('application/components/child/configuration/__locator.application-id','777')
Will change child app ID to 777
"""
def pathGet(dictionary, path):
for item in path.split("/"):
... |
def get_starter_kit_meta(name):
"""
Extract metadata link for starter kit from platform configs. Starter kit available on add component - starter kit menu.
Beware, config could be changed by deploy scripts during deploy.
:param name: Name of starter kit
:return: Link to metadata
"""
kits = y... |
def get_manifest_from_meta(metaurl, name):
"""
Extact manifest url from metadata url
:param metaurl: Url to metadata
:param name: Name of application to extract
:return:
"""
if 'http' in metaurl:
kit = yaml.safe_load(requests.get(url=metaurl).content)['kit']['applications']
else:... |
def getPayloadStruct(self, attributes, objType=None):
""" Function getPayloadStruct
Get the payload structure to do a creation or a modification
@param key: The key to modify
@param attribute: The data
@param objType: NOT USED in this class
@return RETURN: The API result... |
def log(function):
""" Function log
Decorator to log lasts request before sending a new one
@return RETURN: None
"""
def _log(self, *args, **kwargs):
ret = function(self, *args, **kwargs)
if len(self.history) > self.maxHistory:
self.histor... |
def clearReqVars(self):
""" Function clearHistVars
Clear the variables used to get history of all vars
@return RETURN: None
"""
self.errorMsg = None
self.payload = None
self.url = None
self.resp = None
self.res = None
self.method = None
... |
def list(self, obj, filter=False, only_id=False, limit=20):
""" Function list
Get the list of an object
@param obj: object name ('hosts', 'puppetclasses'...)
@param filter: filter for objects
@param only_id: boolean to only return dict with name/id
@return RETURN: the li... |
def get(self, obj, id, sub_object=None):
""" Function get
Get an object by id
@param obj: object name ('hosts', 'puppetclasses'...)
@param id: the id of the object (name or id)
@return RETURN: the targeted object
"""
self.url = '{}{}/{}'.format(self.base_url, obj... |
def get_id_by_name(self, obj, name):
""" Function get_id_by_name
Get the id of an object
@param obj: object name ('hosts', 'puppetclasses'...)
@param id: the id of the object (name or id)
@return RETURN: the targeted object
"""
list = self.list(obj, filter='name ... |
def set(self, obj, id, payload, action='', async=False):
""" Function set
Set an object by id
@param obj: object name ('hosts', 'puppetclasses'...)
@param id: the id of the object (name or id)
@param action: specific action of an object ('power'...)
@param payload: the d... |
def create(self, obj, payload, async=False):
""" Function create
Create an new object
@param obj: object name ('hosts', 'puppetclasses'...)
@param payload: the dict of the payload
@param async: should this request be async, if true use
return.result() to ... |
def delete(self, obj, id):
""" Function delete
Delete an object by id
@param obj: object name ('hosts', 'puppetclasses'...)
@param id: the id of the object (name or id)
@return RETURN: the server response
"""
self.url = '{}{}/{}'.format(self.base_url, obj, id)
... |
def run(self):
"""Modified ``run`` that captures return value and exceptions from ``target``"""
try:
if self._target:
return_value = self._target(*self._args, **self._kwargs)
if return_value is not None:
self._exception = OrphanedReturn(sel... |
def _start_payloads(self):
"""Start all queued payloads"""
with self._lock:
payloads = self._payloads.copy()
self._payloads.clear()
for subroutine in payloads:
thread = CapturingThread(target=subroutine)
thread.start()
self._threads.add... |
def _reap_payloads(self):
"""Clean up all finished payloads"""
for thread in self._threads.copy():
# CapturingThread.join will throw
if thread.join(timeout=0):
self._threads.remove(thread)
self._logger.debug('reaped thread %s', thread) |
def update_cache(func):
"""Decorate functions that modify the internally stored usernotes JSON.
Ensures that updates are mirrored onto reddit.
Arguments:
func: the function being decorated
"""
@wraps(func)
def wrapper(self, *args, **kwargs):
"""The wrapper function."""
... |
def s(cls: Type[C], *args, **kwargs) -> Partial[C]:
"""
Create an unbound prototype of this class, partially applying arguments
.. code:: python
controller = Controller.s(interval=20)
pipeline = controller(rate=10) >> pool
"""
return Partial(cls, *args,... |
def _build_mappings(
self, classes: Sequence[type]
) -> Tuple[Mapping[type, Sequence[type]], Mapping[type, Sequence[type]]]:
"""
Collect all bases and organize into parent/child mappings.
"""
parents_to_children: MutableMapping[type, Set[type]] = {}
children_to_parent... |
def _collect_classes(
self, package_paths: Sequence[str], recurse_subpackages: bool = True
) -> Sequence[type]:
"""
Collect all classes defined in/under ``package_paths``.
"""
import uqbar.apis
classes = []
initial_source_paths: Set[str] = set()
# Gra... |
def get_auth():
"""Return a tuple for authenticating a user
If not successful raise ``AgileError``.
"""
auth = get_auth_from_env()
if auth[0] and auth[1]:
return auth
home = os.path.expanduser("~")
config = os.path.join(home, '.gitconfig')
if not os.path.isfile(config):
... |
def checkAndCreate(self, key, payload, osIds):
""" Function checkAndCreate
Check if an architectures exists and create it if not
@param key: The targeted architectures
@param payload: The targeted architectures description
@param osIds: The list of os ids liked with this archite... |
def pip_command_output(pip_args):
"""
Get output (as a string) from pip command
:param pip_args: list o pip switches to pass
:return: string with results
"""
import sys
import pip
from io import StringIO
# as pip will write to stdout we use some nasty hacks
# to substitute system... |
def setup_versioneer():
"""
Generate (temporarily) versioneer.py file in project root directory
:return:
"""
try:
# assume versioneer.py was generated using "versioneer install" command
import versioneer
versioneer.get_version()
except ImportError:
# it looks vers... |
def clean_cache():
"""
Python won't realise that new module has appeared in the runtime
We need to clean the cache of module finders. Hacking again
:return:
"""
import importlib
try: # Python ver < 3.3
vermod = importlib.import_module("versioneer")
globals()["versioneer"] = ... |
def get_version():
"""
Get project version (using versioneer)
:return: string containing version
"""
setup_versioneer()
clean_cache()
import versioneer
version = versioneer.get_version()
parsed_version = parse_version(version)
if '*@' in str(parsed_version):
import time
... |
def find_common_prefix(
paths: Sequence[Union[str, pathlib.Path]]
) -> Optional[pathlib.Path]:
"""
Find the common prefix of two or more paths.
::
>>> import pathlib
>>> one = pathlib.Path('foo/bar/baz')
>>> two = pathlib.Path('foo/quux/biz')
>>> three = pathlib.Path('f... |
def find_executable(name: str, flags=os.X_OK) -> List[str]:
r"""Finds executable `name`.
Similar to Unix ``which`` command.
Returns list of zero or more full paths to `name`.
"""
result = []
extensions = [x for x in os.environ.get("PATHEXT", "").split(os.pathsep) if x]
path = os.environ.ge... |
def relative_to(
source_path: Union[str, pathlib.Path], target_path: Union[str, pathlib.Path]
) -> pathlib.Path:
"""
Generates relative path from ``source_path`` to ``target_path``.
Handles the case of paths without a common prefix.
::
>>> import pathlib
>>> source = pathlib.Path(... |
def walk(
root_path: Union[str, pathlib.Path], top_down: bool = True
) -> Generator[
Tuple[pathlib.Path, Sequence[pathlib.Path], Sequence[pathlib.Path]], None, None
]:
"""
Walks a directory tree.
Like :py:func:`os.walk` but yielding instances of :py:class:`pathlib.Path`
instead of strings.
... |
def write(
contents: str,
path: Union[str, pathlib.Path],
verbose: bool = False,
logger_func=None,
) -> bool:
"""
Writes ``contents`` to ``path``.
Checks if ``path`` already exists and only write out new contents if the
old contents do not match.
Creates any intermediate missing di... |
def pretty_ref(obj: Any) -> str:
"""Pretty object reference using ``module.path:qual.name`` format"""
try:
return obj.__module__ + ':' + obj.__qualname__
except AttributeError:
return pretty_ref(type(obj)) + '(...)' |
def remote(ctx):
"""Display repo github path
"""
with command():
m = RepoManager(ctx.obj['agile'])
click.echo(m.github_repo().repo_path) |
def graph_order(self):
"""
Get graph-order tuple for node.
::
>>> from uqbar.containers import UniqueTreeContainer, UniqueTreeNode
>>> root_container = UniqueTreeContainer(name="root")
>>> outer_container = UniqueTreeContainer(name="outer")
>>> i... |
def sendQuery(self, cmd, multilines=False):
""" Send command, wait for response (single or multi lines), test for errors and return the returned code.
:param cmd: command to send
:param multilines: True - multiline response, False - single line response.
:return: command return value.
... |
def sendQueryVerify(self, cmd):
""" Send command without return value, wait for completion, verify success.
:param cmd: command to send
"""
cmd = cmd.strip()
self.logger.debug("sendQueryVerify(%s)", cmd)
if not self.is_connected():
raise socket.error("sendQue... |
def find_external_files(self, run_input_dir):
"""
Scan all SHIELDHIT12A config files to find external files used and return them.
Also change paths in config files to match convention that all resources are
symlinked in job_xxxx/symlink
"""
beam_file, geo_file, mat_file, ... |
def _parse_beam_file(self, file_path, run_input_dir):
"""Scan SH12A BEAM file for references to external files and return them"""
external_files = []
paths_to_replace = []
with open(file_path, 'r') as beam_f:
for line in beam_f.readlines():
split_line = line.s... |
def _parse_geo_file(self, file_path, run_input_dir):
"""Scan SH12A GEO file for references to external files (like voxelised geometry) and return them"""
external_files = []
paths_to_replace = []
with open(file_path, 'r') as geo_f:
for line in geo_f.readlines():
... |
def _parse_mat_file(self, file_path):
"""Scan SH12A MAT file for ICRU+LOADEX pairs and return found ICRU numbers"""
mat_file_sections = self._extract_mat_sections(file_path)
return self._analyse_mat_sections(mat_file_sections) |
def _analyse_mat_sections(sections):
"""
Cases:
- ICRU flag present, LOADDEDX flag missing -> data loaded from some data hardcoded in SH12A binary,
no need to load external files
- ICRU flag present, LOADDEDX flag present -> data loaded from external files. ICRU number read from ... |
def _decrypt_icru_files(numbers):
"""Find matching file names for given ICRU numbers"""
import json
icru_file = resource_string(__name__, os.path.join('data', 'SH12A_ICRU_table.json'))
ref_dict = json.loads(icru_file.decode('ascii'))
try:
return [ref_dict[e] for e in ... |
def _rewrite_paths_in_file(config_file, paths_to_replace):
"""
Rewrite paths in config files to match convention job_xxxx/symlink
Requires path to run_xxxx/input/config_file and a list of paths_to_replace
"""
lines = []
# make a copy of config
import shutil
... |
def _check_exists(database: Database, table: LdapObjectClass, key: str, value: str):
""" Check if a given LDAP object exists. """
try:
get_one(table, Q(**{key: value}), database=database)
return True
except ObjectDoesNotExist:
return False |
def save_account(changes: Changeset, table: LdapObjectClass, database: Database) -> Changeset:
""" Modify a changes to add an automatically generated uidNumber. """
d = {}
settings = database.settings
uid_number = changes.get_value_as_single('uidNumber')
if uid_number is None:
scheme = sett... |
def transform_source(text):
'''Replaces instances of
switch expression:
by
for __case in _Switch(n):
and replaces
case expression:
by
if __case(expression):
and
default:
by
if __case():
'''
toks = tokenize.generate_tokens(StringIO... |
def search(self, base, scope, filterstr='(objectClass=*)',
attrlist=None, limit=None) -> Generator[Tuple[str, dict], None, None]:
"""
Search for entries in LDAP database.
"""
_debug("search", base, scope, filterstr, attrlist, limit)
# first results
if att... |
def rename(self, dn: str, new_rdn: str, new_base_dn: Optional[str] = None) -> None:
"""
rename a dn in the ldap database; see ldap module. doesn't return a
result if transactions enabled.
"""
raise NotImplementedError() |
def prepare_env(org):
""" Example shows how to configure environment from scratch """
# Add services
key_service = org.service(type='builtin:cobalt_secure_store', name='Keystore')
wf_service = org.service(type='builtin:workflow_service', name='Workflow', parameters='{}')
# Add services to environm... |
def start(ctx, debug, version, config):
"""Commands for devops operations"""
ctx.obj = {}
ctx.DEBUG = debug
if os.path.isfile(config):
with open(config) as fp:
agile = json.load(fp)
else:
agile = {}
ctx.obj['agile'] = agile
if version:
click.echo(__version... |
def duplicate(obj, value=None, field=None, duplicate_order=None):
"""
Duplicate all related objects of obj setting
field to value. If one of the duplicate
objects has an FK to another duplicate object
update that as well. Return the duplicate copy
of obj.
duplicate_order is a list of models... |
def getPayloadStruct(self, attributes, objType):
""" Function getPayloadStruct
Get the payload structure to do a creation or a modification
@param attribute: The data
@param objType: SubItem type (e.g: hostgroup for hostgroup_class)
@return RETURN: the payload
"""
... |
def validate_url(value):
""" Validate url. """
if not re.match(VIMEO_URL_RE, value) and not re.match(YOUTUBE_URL_RE, value):
raise ValidationError('Invalid URL - only Youtube, Vimeo can be used.') |
def enter_transaction_management(using=None):
"""
Enters transaction management for a running thread. It must be balanced
with the appropriate leave_transaction_management call, since the actual
state is managed as a stack.
The state and dirty flag are carried over from the surrounding block or
... |
def leave_transaction_management(using=None):
"""
Leaves transaction management for a running thread. A dirty flag is carried
over to the surrounding block, as a commit will commit all changes, even
those from outside. (Commits are on connection level.)
"""
if using is None:
for using in... |
def is_dirty(using=None):
"""
Returns True if the current transaction requires a commit for changes to
happen.
"""
if using is None:
dirty = False
for using in tldap.backend.connections:
connection = tldap.backend.connections[using]
if connection.is_dirty():
... |
def is_managed(using=None):
"""
Checks whether the transaction manager is in manual or in auto state.
"""
if using is None:
managed = False
for using in tldap.backend.connections:
connection = tldap.backend.connections[using]
if connection.is_managed():
... |
def commit(using=None):
"""
Does the commit itself and resets the dirty flag.
"""
if using is None:
for using in tldap.backend.connections:
connection = tldap.backend.connections[using]
connection.commit()
return
connection = tldap.backend.connections[using]
... |
def rollback(using=None):
"""
This function does the rollback itself and resets the dirty flag.
"""
if using is None:
for using in tldap.backend.connections:
connection = tldap.backend.connections[using]
connection.rollback()
return
connection = tldap.backend.... |
def _transaction_func(entering, exiting, using):
"""
Takes 3 things, an entering function (what to do to start this block of
transaction management), an exiting function (what to do to end it, on both
success and failure, and using which can be: None, indiciating transaction
should occur on all defi... |
def commit_on_success(using=None):
"""
This decorator activates commit on response. This way, if the view function
runs successfully, a commit is made; if the viewfunc produces an exception,
a rollback is made. This is one of the most common ways to do transaction
control in Web apps.
"""
de... |
def commit_manually(using=None):
"""
Decorator that activates manual transaction control. It just disables
automatic transaction control and doesn't do any commit/rollback of its
own -- it's up to the user to call the commit and rollback functions
themselves.
"""
def entering(using):
... |
def run(self) -> Generator[Tuple[int, int, str, type], None, None]:
"""
Yields:
tuple (line_number: int, offset: int, text: str, check: type)
"""
if is_test_file(self.filename):
self.load()
for func in self.all_funcs():
try:
... |
def process_request(self, request):
"""
Reloads glitter URL patterns if page URLs change.
Avoids having to restart the server to recreate the glitter URLs being used by Django.
"""
global _urlconf_pages
page_list = list(
Page.objects.exclude(glitter_app_name... |
def run(self):
"""
Execute all current and future payloads
Blocks and executes payloads until :py:meth:`stop` is called.
It is an error for any orphaned payload to return or raise.
"""
self._logger.info('runner started: %s', self)
try:
with self._lock... |
def stop(self):
"""Stop execution of all current and future payloads"""
if not self.running.wait(0.2):
return
self._logger.debug('runner disabled: %s', self)
with self._lock:
self.running.clear()
self._stopped.wait() |
def delimit_words(string: str) -> Generator[str, None, None]:
"""
Delimit a string at word boundaries.
::
>>> import uqbar.strings
>>> list(uqbar.strings.delimit_words("i want to believe"))
['i', 'want', 'to', 'believe']
::
>>> list(uqbar.strings.delimit_words("S3Buck... |
def normalize(string: str) -> str:
"""
Normalizes whitespace.
Strips leading and trailing blank lines, dedents, and removes trailing
whitespace from the result.
"""
string = string.replace("\t", " ")
lines = string.split("\n")
while lines and (not lines[0] or lines[0].isspace()):
... |
def to_dash_case(string: str) -> str:
"""
Convert a string to dash-delimited words.
::
>>> import uqbar.strings
>>> string = 'Tô Đặc Biệt Xe Lửa'
>>> print(uqbar.strings.to_dash_case(string))
to-dac-biet-xe-lua
::
>>> string = 'alpha.beta.gamma'
>>> pr... |
def get_lib2to3_fixers():
'''returns a list of all fixers found in the lib2to3 library'''
fixers = []
fixer_dirname = fixer_dir.__path__[0]
for name in sorted(os.listdir(fixer_dirname)):
if name.startswith("fix_") and name.endswith(".py"):
fixers.append("lib2to3.fixes." + name[:-3])
... |
def get_single_fixer(fixname):
'''return a single fixer found in the lib2to3 library'''
fixer_dirname = fixer_dir.__path__[0]
for name in sorted(os.listdir(fixer_dirname)):
if (name.startswith("fix_") and name.endswith(".py")
and fixname == name[4:-3]):
return "lib2to3.fixes... |
def to_db(self, value):
""" Returns field's single value prepared for saving into a database. """
# ensure value is valid
self.validate(value)
assert isinstance(value, list)
value = list(value)
for i, v in enumerate(value):
value[i] = self.value_to_db(v)
... |
def to_python(self, value):
"""
Converts the input value into the expected Python data type, raising
django.core.exceptions.ValidationError if the data can't be converted.
Returns the converted value. Subclasses should override this.
"""
assert isinstance(value, list)
... |
def validate(self, value):
"""
Validates value and throws ValidationError. Subclasses should override
this to provide validation logic.
"""
# check object type
if not isinstance(value, list):
raise tldap.exceptions.ValidationError(
"is not a li... |
def clean(self, value):
"""
Convert the value's type and run validation. Validation errors from
to_python and validate are propagated. The correct value is returned if
no error is raised.
"""
value = self.to_python(value)
self.validate(value)
return value |
def value_to_db(self, value):
""" Returns field's single value prepared for saving into a database. """
if isinstance(value, six.string_types):
value = value.encode("utf_8")
return value |
def value_to_python(self, value):
"""
Converts the input single value into the expected Python data type,
raising django.core.exceptions.ValidationError if the data can't be
converted. Returns the converted value. Subclasses should override
this.
"""
if not isins... |
def value_validate(self, value):
"""
Validates value and throws ValidationError. Subclasses should override
this to provide validation logic.
"""
if not isinstance(value, six.string_types):
raise tldap.exceptions.ValidationError("should be a string") |
def value_to_python(self, value):
"""
Converts the input single value into the expected Python data type,
raising django.core.exceptions.ValidationError if the data can't be
converted. Returns the converted value. Subclasses should override
this.
"""
if not isins... |
def value_to_db(self, value):
""" Returns field's single value prepared for saving into a database. """
assert isinstance(value, six.integer_types)
return str(value).encode("utf_8") |
def value_validate(self, value):
"""
Converts the input single value into the expected Python data type,
raising django.core.exceptions.ValidationError if the data can't be
converted. Returns the converted value. Subclasses should override
this.
"""
if not isinst... |
def value_to_python(self, value):
"""
Converts the input single value into the expected Python data type,
raising django.core.exceptions.ValidationError if the data can't be
converted. Returns the converted value. Subclasses should override
this.
"""
if not isins... |
def value_to_db(self, value):
""" Returns field's single value prepared for saving into a database. """
assert isinstance(value, datetime.date)
assert not isinstance(value, datetime.datetime)
try:
value = value - datetime.date(year=1970, month=1, day=1)
except Overfl... |
def value_validate(self, value):
"""
Converts the input single value into the expected Python data type,
raising django.core.exceptions.ValidationError if the data can't be
converted. Returns the converted value. Subclasses should override
this.
"""
if not isinst... |
def value_to_db(self, value):
""" Returns field's single value prepared for saving into a database. """
assert isinstance(value, datetime.datetime)
try:
value = value - datetime.datetime(1970, 1, 1)
except OverflowError:
raise tldap.exceptions.ValidationError("is... |
def value_validate(self, value):
"""
Converts the input single value into the expected Python data type,
raising django.core.exceptions.ValidationError if the data can't be
converted. Returns the converted value. Subclasses should override
this.
"""
if not isinst... |
def value_to_python(self, value):
"""
Converts the input single value into the expected Python data type,
raising django.core.exceptions.ValidationError if the data can't be
converted. Returns the converted value. Subclasses should override
this.
"""
if not isins... |
def value_to_db(self, value):
""" Returns field's single value prepared for saving into a database. """
assert isinstance(value, str)
array = value.split("-")
length = len(array) - 3
assert length >= 0
assert array[0] == 'S'
array = array[1:2] + [length, 0, 0,... |
def value_validate(self, value):
"""
Converts the input single value into the expected Python data type,
raising django.core.exceptions.ValidationError if the data can't be
converted. Returns the converted value. Subclasses should override
this.
"""
if not isinst... |
def get(self, id):
"""Get data for this component
"""
id = self.as_id(id)
url = '%s/%s' % (self, id)
response = self.http.get(url, auth=self.auth)
response.raise_for_status()
return response.json() |
def create(self, data):
"""Create a new component
"""
response = self.http.post(str(self), json=data, auth=self.auth)
response.raise_for_status()
return response.json() |
def update(self, id, data):
"""Update a component
"""
id = self.as_id(id)
response = self.http.patch(
'%s/%s' % (self, id), json=data, auth=self.auth
)
response.raise_for_status()
return response.json() |
def delete(self, id):
"""Delete a component by id
"""
id = self.as_id(id)
response = self.http.delete(
'%s/%s' % (self.api_url, id),
auth=self.auth)
response.raise_for_status() |
def get_list(self, url=None, callback=None, limit=100, **data):
"""Get a list of this github component
:param url: full url
:param Comp: a :class:`.Component` class
:param callback: Optional callback
:param limit: Optional number of items to retrieve
:param data: addition... |
def comments(self, issue):
"""Return all comments for this issue/pull request
"""
commit = self.as_id(issue)
return self.get_list(url='%s/%s/comments' % (self, commit)) |
def has_edit_permission(self, request, obj=None, version=None):
"""
Returns a boolean if the user in the request has edit permission for the object.
Can also be passed a version object to check if the user has permission to edit a version
of the object (if they own it).
"""
... |
def has_publish_permission(self, request, obj=None):
"""
Returns a boolean if the user in the request has publish permission for the object.
"""
permission_name = '{}.publish_{}'.format(self.opts.app_label, self.opts.model_name)
has_permission = request.user.has_perm(permission_n... |
def semantic_version(tag):
"""Get a valid semantic version for tag
"""
try:
version = list(map(int, tag.split('.')))
assert len(version) == 3
return tuple(version)
except Exception as exc:
raise CommandError(
'Could not parse "%s", please use '
'MA... |
def load(self, data):
""" Function load
Store the object data
"""
self.clear()
self.update(data)
self.enhance() |
def enhance(self):
""" Function enhance
Enhance the object with new item or enhanced items
"""
if self.objName in ['hosts', 'hostgroups',
'puppet_classes']:
from foreman.itemSmartClassParameter\
import ItemSmartClassParameter
... |
def reload(self):
""" Function reload
Sync the full object
"""
self.load(self.api.get(self.objName, self.key)) |
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