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def randtld(self):
""" -> a random #str tld via :mod:tlds """
self.tlds = tuple(tlds.tlds) if not self.tlds else self.tlds
return self.random.choice(self.tlds)
|
def randurl(self):
""" -> a random url-like #str via :prop:randdomain, :prop:randtld,
and :prop:randpath
"""
return "{}://{}.{}/{}".format(
self.random.choice(("http", "https")),
self.randdomain, self.randtld, self.randpath)
|
def randtuple(self):
""" -> a #tuple of random #int """
return tuple(
self.randint
for x in range(0, self.random.randint(3, 10)))
|
def randdeque(self):
""" -> a :class:collections.deque of random #int """
return deque(
self.randint
for x in range(0, self.random.randint(3, 10)))
|
def randdict(self):
""" -> a #dict of |{random_string: random_int}| """
return {
self.randstr: self._map_type(int)
for x in range(self.random.randint(3, 10))}
|
def randset(self):
""" -> a #set of random integers """
return {
self._map_type(int)
for x in range(self.random.randint(3, 10))}
|
def _to_tuple(self, _list):
""" Recursively converts lists to tuples """
result = list()
for l in _list:
if isinstance(l, list):
result.append(tuple(self._to_tuple(l)))
else:
result.append(l)
return tuple(result)
|
def dict(self, key_depth=1000, tree_depth=1):
""" Creates a random #dict
@key_depth: #int number of keys per @tree_depth to generate random
values for
@tree_depth: #int dict tree dimensions size, i.e.
1=|{key: value}|
2=|{key: {key: value}, key2: {key2: value2}}|
-> random #dict
"""
if not tree_depth:
return self._map_type()
return {
self.randstr: self.dict(key_depth, tree_depth-1)
for x in range(key_depth)}
|
def defaultdict(self, key_depth=1000, tree_depth=1):
""" Creates a random :class:collections.defaultdict
@key_depth: #int number of keys per @tree_depth to generate random
values for
@tree_depth: #int dict tree dimensions size, i.e.
1=|{key: value}|
2=|{key: {key: value}, key2: {key2: value2}}|
-> random :class:collections.defaultdict
"""
if not tree_depth:
return self._map_type()
_dict = defaultdict()
_dict.update({
self.randstr: self.defaultdict(key_depth, tree_depth-1)
for x in range(key_depth)})
return _dict
|
def tuple(self, size=1000, tree_depth=1):
""" Creates a random #tuple
@size: #int number of random values to include in each @tree_depth
@tree_depth: #int dict tree dimensions size, i.e.
1=|(value1, value2)|
2=|((value1, value2), (value1, value2))|
-> random #tuple
"""
if not tree_depth:
return self._map_type()
return tuple(self.tuple(size, tree_depth-1) for x in range(size))
|
def generator(self, size=1000, tree_depth=1):
""" Creates a random #generator
@size: #int number of random values to include in each @tree_depth
@tree_depth: #int dict tree dimensions size, i.e.
1=|(value1, value2)|
2=|((value1, value2), (value1, value2))|
-> random :class:collections.deque
"""
if not tree_depth:
return self._map_type()
return (self.generator(size, tree_depth-1) for x in range(size))
|
def sequence(self, struct, size=1000, tree_depth=1, append_callable=None):
""" Generates random values for sequence-like objects
@struct: the sequence-like structure you want to fill with random
data
@size: #int number of random values to include in each @tree_depth
@tree_depth: #int dict tree dimensions size, i.e.
1=|(value1, value2)|
2=|((value1, value2), (value1, value2))|
@append_callable: #callable method which appends/adds data to your
sequence-like structure - e.g. :meth:list.append
-> random @struct
..
from collections import UserList
from vital.debug import RandData
class MySequence(UserList):
pass
rd = RandData(int)
my_seq = MySequence()
rd.sequence(my_seq, 3, 1, my_seq.append)
# -> [88508293836062443, 49097807561770961, 55043550817099444]
..
"""
if not tree_depth:
return self._map_type()
_struct = struct()
add_struct = _struct.append if not append_callable \
else getattr(_struct, append_callable)
for x in range(size):
add_struct(self.sequence(
struct, size, tree_depth-1, append_callable))
return _struct
|
def mapping(self, struct, key_depth=1000, tree_depth=1,
update_callable=None):
""" Generates random values for dict-like objects
@struct: the dict-like structure you want to fill with random data
@size: #int number of random values to include in each @tree_depth
@tree_depth: #int dict tree dimensions size, i.e.
1=|{key: value}|
2=|{key: {key: value}, key2: {key2: value2}}|
@update_callable: #callable method which updates data in your
dict-like structure - e.g. :meth:builtins.dict.update
-> random @struct
..
from collections import UserDict
from vital.debug import RandData
class MyDict(UserDict):
pass
rd = RandData(int)
my_dict = MyDict()
rd.dict(my_dict, 3, 1, my_dict.update)
# -> {
# 'SE0ZNy0F6O': 42078648993195761,
# 'pbK': 70822820981335987,
# '0A5Aa7': 17503122029338459}
..
"""
if not tree_depth:
return self._map_type()
_struct = struct()
add_struct = _struct.update if not update_callable \
else getattr(_struct, update_callable)
for x in range(key_depth):
add_struct({
self.randstr: self.mapping(
struct, key_depth, tree_depth-1, update_callable)
})
return _struct
|
def _dict_prefix(self, key, value, i, dj=0, color=None, separator=":"):
just = self._justify if i > 0 else dj
key = cut(str(key), self._key_maxlen).rjust(just)
key = colorize(key, color=color)
pref = "{}{} {}".format(key, separator, value)
"""pref = "{}{} {}".format(colorize(str(key)[:self._key_maxlen]\
.rjust(just), color=color), separator, value)"""
return pref
|
def _format_numeric_sequence(self, _sequence, separator="."):
""" Length of the highest index in chars = justification size """
if not _sequence:
return colorize(_sequence, "purple")
_sequence = _sequence if _sequence is not None else self.obj
minus = (2 if self._depth > 0 else 0)
just_size = len(str(len(_sequence)))
out = []
add_out = out.append
for i, item in enumerate(_sequence):
self._incr_just_size(just_size+minus)
add_out(self._numeric_prefix(
i, self.pretty(item, display=False),
just=just_size, color="blue", separator=separator))
self._decr_just_size(just_size+minus)
if not self._depth:
return padd("\n".join(out) if out else str(out), padding="top")
else:
return "\n".join(out) if out else str(out)
|
def objname(self, obj=None):
""" Formats object names in a pretty fashion """
obj = obj or self.obj
_objname = self.pretty_objname(obj, color=None)
_objname = "'{}'".format(colorize(_objname, "blue"))
return _objname
|
def pretty(self, obj=None, display=True):
""" Formats @obj or :prop:obj
@obj: the object you'd like to prettify
-> #str pretty object
"""
ret = self._format_obj(obj if obj is not None else self.obj)
if display:
print(ret)
else:
return ret
|
def _format_obj(self, item=None):
""" Determines the type of the object and maps it to the correct
formatter
"""
# Order here matters, odd behavior with tuples
if item is None:
return getattr(self, 'number')(item)
elif isinstance(item, self.str_):
#: String
return item + " "
elif isinstance(item, bytes):
#: Bytes
return getattr(self, 'bytes')(item)
elif isinstance(item, self.numeric_):
#: Float, int, etc.
return getattr(self, 'number')(item)
elif isinstance(item, self.dict_):
#: Dict
return getattr(self, 'dict')(item)
elif isinstance(item, self.list_):
#: List
return getattr(self, 'list')(item)
elif isinstance(item, tuple):
#: Tuple
return getattr(self, 'tuple')(item)
elif isinstance(item, types.GeneratorType):
#: Generator
return getattr(self, 'generator')(item)
elif isinstance(item, self.set_):
#: Set
return getattr(self, 'set')(item)
elif isinstance(item, deque):
#: Deque
return getattr(self, 'deque')(item)
elif isinstance(item, Sequence):
#: Sequence
return getattr(self, 'sequence')(item)
#: Any other object
return getattr(self, 'object')(item)
|
def pretty_objname(self, obj=None, maxlen=50, color="boldcyan"):
""" Pretty prints object name
@obj: the object whose name you want to pretty print
@maxlen: #int maximum length of an object name to print
@color: your choice of :mod:colors or |None|
-> #str pretty object name
..
from vital.debug import Look
print(Look.pretty_objname(dict))
# -> 'dict\x1b[1;36m<builtins>\x1b[1;m'
..
"""
parent_name = lambda_sub("", get_parent_name(obj) or "")
objname = get_obj_name(obj)
if color:
objname += colorize("<{}>".format(parent_name), color, close=False)
else:
objname += "<{}>".format(parent_name)
objname = objname if len(objname) < maxlen else \
objname[:(maxlen-1)]+"…>"
if color:
objname += colors.RESET
return objname
|
def set_level(self, level):
""" Sets :attr:loglevel to @level
@level: #str one or several :attr:levels
"""
if not level:
return None
self.levelmap = set()
for char in level:
self.levelmap = self.levelmap.union(self.levels[char])
self.loglevel = level
return self.loglevel
|
def log(self, flag_message=None, padding=None, color=None, force=False):
""" Log Level: :attr:LOG
@flag_message: #str flags the message with the given text
using :func:flag
@padding: #str 'top', 'bottom' or 'all', adds a new line to the
specified area with :func:padd
@color: #str colorizes @flag_message using :func:colorize
@force: #bool whether or not to force the message to log in spite
of the assigned log level
..
from vital.debug import Logg
logg = Logg(loglevel="v")
logg("World").log("Hello")
# (Hello) World
logg("Hello world").log()
# Hello world
..
"""
if self.should_log(self.LOG) or force:
self._print_message(
flag_message=flag_message, color=color or colors.bold,
padding=padding)
|
def success(self, flag_message="Success", padding=None, force=False):
""" Log Level: :attr:SUCCESS
@flag_message: #str flags the message with the given text
using :func:flag
@padding: #str 'top', 'bottom' or 'all', adds a new line to the
specified area with :func:padd
@color: #str colorizes @flag_message using :func:colorize
@force: #bool whether or not to force the message to log in spite
of the assigned log level
..
from vital.debug import Logg
logg = Logg(loglevel="v")
logg("World").success("Hello")
# (Hello) World
logg("Hello world").success()
# (Success) Hello world
..
"""
if self.should_log(self.SUCCESS) or force:
self._print_message(
flag_message=flag_message, color=colors.success_color,
padding=padding)
|
def complete(self, flag_message="Complete", padding=None, force=False):
""" Log Level: :attr:COMPLETE
@flag_message: #str flags the message with the given text
using :func:flag
@padding: #str 'top', 'bottom' or 'all', adds a new line to the
specified area with :func:padd
@color: #str colorizes @flag_message using :func:colorize
@force: #bool whether or not to force the message to log in spite
of the assigned log level
..
from vital.debug import Logg
logg = Logg(loglevel="v")
logg("World").complete("Hello")
# (Hello) World
logg("Hello world").complete()
# (Complete) Hello world
..
"""
if self.should_log(self.COMPLETE) or force:
self._print_message(
flag_message=flag_message, color=colors.complete_color,
padding=padding)
|
def notice(self, flag_message="Notice", padding=None, force=False):
""" Log Level: :attr:NOTICE
@flag_message: #str flags the message with the given text
using :func:flag
@padding: #str 'top', 'bottom' or 'all', adds a new line to the
specified area with :func:padd
@color: #str colorizes @flag_message using :func:colorize
@force: #bool whether or not to force the message to log in spite
of the assigned log level
..
from vital.debug import Logg
logg = Logg(loglevel="v")
logg("World").notice("Hello")
# (Hello) World
logg("Hello world").notice()
# (Notice) Hello world
..
"""
if self.should_log(self.NOTICE) or force:
self._print_message(
flag_message=flag_message, color=colors.notice_color,
padding=padding)
|
def warning(self, flag_message="Warning", padding=None, force=False):
""" Log Level: :attr:WARNING
@flag_message: #str flags the message with the given text
using :func:flag
@padding: #str 'top', 'bottom' or 'all', adds a new line to the
specified area with :func:padd
@color: #str colorizes @flag_message using :func:colorize
@force: #bool whether or not to force the message to log in spite
of the assigned log level
..
from vital.debug import Logg
logg = Logg(loglevel="v")
logg("World").warning("Hello")
# (Hello) World
logg("Hello world").warning()
# (Warning) Hello world
..
"""
if self.should_log(self.WARNING) or force:
self._print_message(
flag_message=flag_message, color=colors.warning_color,
padding=padding)
|
def error(self, flag_message="Error", padding=None, force=False):
""" Log Level: :attr:ERROR
@flag_message: #str flags the message with the given text
using :func:flag
@padding: #str 'top', 'bottom' or 'all', adds a new line to the
specified area with :func:padd
@color: #str colorizes @flag_message using :func:colorize
@force: #bool whether or not to force the message to log in spite
of the assigned log level
..
from vital.debug import Logg
logg = Logg(loglevel="v")
logg("World").error("Hello")
# (Hello) World
logg("Hello world").error()
# (Error) Hello world
..
"""
if self.should_log(self.ERROR) or force:
self._print_message(
flag_message=flag_message, color=colors.error_color,
padding=padding)
|
def timing(self, flag_message, padding=None, force=False):
""" Log Level: :attr:TIMING
@flag_message: time-like #float
@padding: #str 'top', 'bottom' or 'all', adds a new line to the
specified area with :func:padd
@force: #bool whether or not to force the message to log in spite
of the assigned log level
..
from vital.debug import Logg
logg = Logg(loglevel="v")
logg("Finished in").timing(0.908)
# Finished in (908.0ms)
logg().timing(0.908)
# (908.0ms)
..
"""
if self.should_log(self.TIMING) or force:
self._print_message(
flag_message=Timer.format_time(flag_message), padding=padding,
reverse=True, color=colors.timing_color)
|
def count(self, flag_message, padding=None, force=False):
""" Log Level: :attr:COUNT
@flag_message: time-like #float
@padding: #str 'top', 'bottom' or 'all', adds a new line to the
specified area with :func:padd
@force: #bool whether or not to force the message to log in spite
of the assigned log level
..
from vital.debug import Logg
logg = Logg(loglevel="v")
logg("Total apps").count(3)
# Total apps (3)
logg().count([0, 1, 2, 3])
# (4)
..
"""
if self.should_log(self.COUNT) or force:
flag_message = flag_message \
if isinstance(flag_message, (int, float)) else \
str(len(flag_message))
self._print_message(
flag_message=flag_message, padding=padding, reverse=True,
color=colors.timing_color)
|
def format_message(self, message):
""" Formats a message with :class:Look """
look = Look(message)
return look.pretty(display=False)
|
def format_messages(self, messages):
""" Formats several messages with :class:Look, encodes them
with :func:vital.tools.encoding.stdout_encode """
mess = ""
for message in self.message:
if self.pretty:
mess = "{}{}".format(mess, self.format_message(message))
else:
mess += str(message)
if self.include_time:
return ": {} : {}".format(
datetime.datetime.now().strftime('%Y-%m-%d %H:%M:%S'), mess)
return stdout_encode(mess)
|
def _print_message(self, flag_message=None, color=None, padding=None,
reverse=False):
""" Outputs the message to the terminal """
if flag_message:
flag_message = stdout_encode(flag(flag_message,
color=color if self.pretty else None,
show=False))
if not reverse:
print(padd(flag_message, padding),
self.format_messages(self.message))
else:
print(self.format_messages(self.message),
padd(flag_message, padding))
else:
print(self.format_messages(self.message))
self.message = []
|
def format_bar(self):
""" Builds the progress bar """
pct = floor(round(self.progress/self.size, 2)*100)
pr = floor(pct*.33)
bar = "".join(
["‒" for x in range(pr)] + ["↦"] +
[" " for o in range(self._barsize-pr-1)])
subprogress = self.format_parent_bar() if self.parent_bar else ""
message = "Loading{} ={}{} ({}%)".format(subprogress, bar, "☉", pct)
return message.ljust(len(message)+5)
|
def finish(self):
""" Resets the progress bar and clears it from the terminal """
pct = floor(round(self.progress/self.size, 2)*100)
pr = floor(pct*.33)
bar = "".join([" " for x in range(pr-1)] + ["↦"])
subprogress = self.format_parent_bar() if self.parent_bar else ""
fin = "Loading{} ={}{} ({}%)".format(subprogress, bar, "ӿ", pct)
print(fin.ljust(len(fin)+5), end="\r")
time.sleep(0.10)
print("\033[K\033[1A")
self.progress = 0
|
def update(self, progress=0):
""" Updates the progress bar with @progress if given, otherwise
increments :prop:progress by 1. Also prints the progress bar.
@progress: #int to assign to :prop:progress
"""
self.progress += (progress or 1)
if self.visible:
if self.progress % self._mod == 1 or\
self.progress == self.size - 1:
print(self.format_bar(), end="\r")
if self.progress == (self.size):
self.finish()
|
def start(self):
""" Starts the timer """
if not self._start:
self._first_start = time.perf_counter()
self._start = self._first_start
else:
self._start = time.perf_counter()
|
def stop(self, precision=0):
""" Stops the timer, adds it as an interval to :prop:intervals
@precision: #int number of decimal places to round to
-> #str formatted interval time
"""
self._stop = time.perf_counter()
return self.add_interval(precision)
|
def format_time(self, sec):
""" Pretty-formats a given time in a readable manner
@sec: #int or #float seconds
-> #str formatted time
"""
# µsec
if sec < 0.001:
return "{}{}".format(
colorize(round(sec*1000000, 2), "purple"), bold("µs"))
# ms
elif sec < 1.0:
return "{}{}".format(
colorize(round(sec*1000, 2), "purple"), bold("ms"))
# s
elif sec < 60.0:
return "{}{}".format(
colorize(round(sec, 2), "purple"), bold("s"))
else:
floored = floor(sec/60)
return "{}{} {}{}".format(
colorize(floored, "purple"),
bold("m"),
colorize(floor(sec-(floored*60)), "purple"),
bold("s"))
|
def format_size(self, bytes):
""" Pretty-formats given bytes size in a readable manner
@bytes: #int or #float bytes
-> #str formatted bytes
"""
# b
if bytes < 1024:
return "{}{}".format(colorize(round(
bytes, 2), "purple"),
bold("bytes"))
# kb
elif bytes < (1024*1000):
return "{}{}".format(colorize(round(
bytes/1024, 2), "purple"),
bold("kB"))
# mb
elif bytes < (1024*1024):
return "{}{}".format(colorize(round(
bytes/1024, 2), "purple"),
bold("MB"))
|
def add_interval(self, precision=0):
""" Adds an interval to :prop:intervals
-> #str formatted time
"""
precision = precision or self.precision
interval = round((self._stop - self._start), precision)
self.intervals.append(interval)
self._intervals_len += 1
self._start = time.perf_counter()
return self.format_time(interval)
|
def time(self, intervals=1, *args, _show_progress=True, _print=True,
_collect_garbage=True, _quiet=True, **kwargs):
""" Measures the execution time of :prop:_callable for @intervals
@intervals: #int number of intervals to measure the execution time
of the function for
@*args: arguments to pass to the callable being timed
@**kwargs: arguments to pass to the callable being timed
@_show_progress: #bool whether or not to print a progress bar
@_print: #bool whether or not to print the results of the timing
@_collect_garbage: #bool whether or not to garbage collect
while timing
@_quiet: #bool whether or not to disable the print() function's
ability to output to terminal during the timing
-> :class:collections.OrderedDict of stats about the timing
"""
self.reset()
args = list(args) + list(self._callableargs[0])
_kwargs = self._callableargs[1]
_kwargs.update(kwargs)
kwargs = _kwargs
if not _collect_garbage:
gc.disable() # Garbage collection setting
gc.collect()
self.allocated_memory = 0
for x in self.progress(intervals):
if _quiet: # Quiets print()s in the tested function
sys.stdout = NullIO()
try:
self.start() # Starts the timer
self._callable(*args, **kwargs)
self.stop() # Stops the timer
except Exception as e:
if _quiet: # Unquiets prints()
sys.stdout = sys.__stdout__
raise e
if _quiet: # Unquiets prints()
sys.stdout = sys.__stdout__
if not _collect_garbage:
gc.enable() # Garbage collection setting
if _print:
self.info()
|
def mean(self):
""" -> #float :func:numpy.mean of the timing intervals """
return round(np.mean(self.array), self.precision)\
if len(self.array) else None
|
def median(self):
""" -> #float :func:numpy.median of the timing intervals """
return round(float(np.median(self.array)), self.precision)\
if len(self.array) else None
|
def max(self):
""" -> #float :func:numpy.max of the timing intervals """
return round(np.max(self.array), self.precision)\
if len(self.array) else None
|
def min(self):
""" -> #float :func:numpy.min of the timing intervals """
return round(np.min(self.array), self.precision)\
if len(self.array) else None
|
def stdev(self):
""" -> #float :func:numpy.std of the timing intervals """
return round(np.std(self.array), self.precision)\
if len(self.array) else None
|
def stats(self):
""" -> :class:collections.OrderedDict of stats about the time intervals
"""
return OrderedDict([
("Intervals", len(self.array)),
("Mean", self.format_time(self.mean or 0)),
("Min", self.format_time(self.min or 0)),
("Median", self.format_time(self.median or 0)),
("Max", self.format_time(self.max or 0)),
("St. Dev.", self.format_time(self.stdev or 0)),
("Total", self.format_time(self.exectime or 0)),
])
|
def _pct_diff(self, best, other):
""" Calculates and colorizes the percent difference between @best
and @other
"""
return colorize("{}%".format(
round(((best-other)/best)*100, 2)).rjust(10), "red")
|
def info(self, verbose=None):
""" Prints and formats the results of the timing
@_print: #bool whether or not to print out to terminal
@verbose: #bool True if you'd like to print the individual timing
results in additions to the comparison results
"""
if self.name:
flag(bold(self.name))
flag("Results after {} intervals".format(
bold(self.num_intervals, close=False)),
colors.notice_color, padding="top")
line("‒")
verbose = verbose if verbose is not None else self.verbose
if verbose:
for result in self._callable_results:
result.info()
line()
diffs = [
(i, result.mean)
for i, result in enumerate(self._callable_results)
if result.mean]
ranking = [
(i, self._callable_results[i].format_time(r))
for i, r in sorted(diffs, key=lambda x: x[1])]
max_rlen = len(str(len(ranking)))+2
max_rlen2 = max(len(r) for i, r in ranking)+1
best = self._callable_results[ranking[0][0]].mean
for idx, (i, rank) in enumerate(ranking, 1):
_obj_name = Look(self._callables[i]).objname()
pct = "".rjust(10) if idx == 1 else \
self._pct_diff(best, self._callable_results[i].mean)
print(
("#"+str(idx)+" ¦").rjust(max_rlen), rank.rjust(max_rlen2),
pct, "{}".format(_obj_name))
line("‒", padding="bottom")
|
def fi_iban_load_map(filename: str) -> dict:
"""
Loads Finnish monetary institution codes and BICs in CSV format.
Map which is based on 3 digits as in FIXX<3 digits>.
Can be used to map Finnish IBAN number to bank information.
Format: dict('<3 digits': (BIC, name), ...)
:param filename: CSV file name of the BIC definitions. Columns: National ID, BIC Code, Institution Name
"""
out = {}
with open(filename, 'rt') as fp:
lines = [line.strip().split(',') for line in fp.readlines()]
ver = lines.pop(0)
head = lines.pop(0)
if head != ['National ID', 'BIC Code', 'Financial Institution Name']:
raise ValidationError('Incompatible file content in {}'.format(filename))
for line in lines:
if len(line) == 3 and line[0]:
nat_id = str(line[0]).strip()
bic_code = line[1].strip()
name = line[2].strip()
out[nat_id] = (bic_code, name)
return out
|
def async_lru(size=100):
""" An LRU cache for asyncio coroutines in Python 3.5
..
@async_lru(1024)
async def slow_coroutine(*args, **kwargs):
return await some_other_slow_coroutine()
..
"""
cache = collections.OrderedDict()
def decorator(fn):
@wraps(fn)
@asyncio.coroutine
def memoizer(*args, **kwargs):
key = str((args, kwargs))
try:
result = cache.pop(key)
cache[key] = result
except KeyError:
if len(cache) >= size:
cache.popitem(last=False)
result = cache[key] = yield from fn(*args, **kwargs)
return result
return memoizer
return decorator
|
def choices_label(choices: tuple, value) -> str:
"""
Iterates (value,label) list and returns label matching the choice
:param choices: [(choice1, label1), (choice2, label2), ...]
:param value: Value to find
:return: label or None
"""
for key, label in choices:
if key == value:
return label
return ''
|
def info(msg, *args, **kw):
# type: (str, *Any, **Any) -> None
""" Print sys message to stdout.
System messages should inform about the flow of the script. This should
be a major milestones during the build.
"""
if len(args) or len(kw):
msg = msg.format(*args, **kw)
shell.cprint('-- <32>{}<0>'.format(msg))
|
def err(msg, *args, **kw):
# type: (str, *Any, **Any) -> None
""" Per step status messages
Use this locally in a command definition to highlight more important
information.
"""
if len(args) or len(kw):
msg = msg.format(*args, **kw)
shell.cprint('-- <31>{}<0>'.format(msg))
|
def is_username(string, minlen=1, maxlen=15):
""" Determines whether the @string pattern is username-like
@string: #str being tested
@minlen: minimum required username length
@maxlen: maximum username length
-> #bool
"""
if string:
string = string.strip()
return username_re.match(string) and (minlen <= len(string) <= maxlen)
return False
|
def bigint_to_string(val):
""" Converts @val to a string if it is a big integer (|>2**53-1|)
@val: #int or #float
-> #str if @val is a big integer, otherwise @val
"""
if isinstance(val, _NUMBERS) and not abs(val) <= 2**53-1:
return str(val)
return val
|
def rbigint_to_string(obj):
""" Recursively converts big integers (|>2**53-1|) to strings
@obj: Any python object
-> @obj, with any big integers converted to #str objects
"""
if isinstance(obj, (str, bytes)) or not obj:
# the input is the desired one, return as is
return obj
elif hasattr(obj, 'items'):
# the input is a dict {}
for k, item in obj.items():
obj[k] = rbigint_to_string(item)
return obj
elif hasattr(obj, '__iter__'):
# the input is iterable
is_tuple = isinstance(obj, tuple)
if is_tuple:
obj = list(obj)
for i, item in enumerate(obj):
obj[i] = rbigint_to_string(item)
return obj if not is_tuple else tuple(obj)
return bigint_to_string(obj)
|
def remove_blank_lines(string):
""" Removes all blank lines in @string
-> #str without blank lines
"""
return "\n".join(line
for line in string.split("\n")
if len(line.strip()))
|
def _manage_cmd(cmd, settings=None):
# type: () -> None
""" Run django ./manage.py command manually.
This function eliminates the need for having ``manage.py`` (reduces file
clutter).
"""
import sys
from os import environ
from peltak.core import conf
from peltak.core import context
from peltak.core import log
sys.path.insert(0, conf.get('src_dir'))
settings = settings or conf.get('django.settings', None)
environ.setdefault("DJANGO_SETTINGS_MODULE", settings)
args = sys.argv[0:-1] + cmd
if context.get('pretend', False):
log.info("Would run the following manage command:\n<90>{}", args)
else:
from django.core.management import execute_from_command_line
execute_from_command_line(args)
|
def current_branch():
# type: () -> BranchDetails
""" Return the BranchDetails for the current branch.
Return:
BranchDetails: The details of the current branch.
"""
cmd = 'git symbolic-ref --short HEAD'
branch_name = shell.run(
cmd,
capture=True,
never_pretend=True
).stdout.strip()
return BranchDetails.parse(branch_name)
|
def commit_branches(sha1):
# type: (str) -> List[str]
""" Get the name of the branches that this commit belongs to. """
cmd = 'git branch --contains {}'.format(sha1)
return shell.run(
cmd,
capture=True,
never_pretend=True
).stdout.strip().split()
|
def guess_base_branch():
# type: (str) -> Optional[str, None]
""" Try to guess the base branch for the current branch.
Do not trust this guess. git makes it pretty much impossible to guess
the base branch reliably so this function implements few heuristics that
will work on most common use cases but anything a bit crazy will probably
trip this function.
Returns:
Optional[str]: The name of the base branch for the current branch if
guessable or **None** if can't guess.
"""
my_branch = current_branch(refresh=True).name
curr = latest_commit()
if len(curr.branches) > 1:
# We're possibly at the beginning of the new branch (currently both
# on base and new branch).
other = [x for x in curr.branches if x != my_branch]
if len(other) == 1:
return other[0]
return None
else:
# We're on one branch
parent = curr
while parent and my_branch in parent.branches:
curr = parent
if len(curr.branches) > 1:
other = [x for x in curr.branches if x != my_branch]
if len(other) == 1:
return other[0]
return None
parents = [p for p in curr.parents if my_branch in p.branches]
num_parents = len(parents)
if num_parents > 2:
# More than two parent, give up
return None
if num_parents == 2:
# This is a merge commit.
for p in parents:
if p.branches == [my_branch]:
parent = p
break
elif num_parents == 1:
parent = parents[0]
elif num_parents == 0:
parent = None
return None
|
def commit_author(sha1=''):
# type: (str) -> Author
""" Return the author of the given commit.
Args:
sha1 (str):
The sha1 of the commit to query. If not given, it will return the
sha1 for the current commit.
Returns:
Author: A named tuple ``(name, email)`` with the commit author details.
"""
with conf.within_proj_dir():
cmd = 'git show -s --format="%an||%ae" {}'.format(sha1)
result = shell.run(
cmd,
capture=True,
never_pretend=True
).stdout
name, email = result.split('||')
return Author(name, email)
|
def unstaged():
# type: () -> List[str]
""" Return a list of unstaged files in the project repository.
Returns:
list[str]: The list of files not tracked by project git repo.
"""
with conf.within_proj_dir():
status = shell.run(
'git status --porcelain',
capture=True,
never_pretend=True
).stdout
results = []
for file_status in status.split(os.linesep):
if file_status.strip() and file_status[0] == ' ':
results.append(file_status[3:].strip())
return results
|
def ignore():
# type: () -> List[str]
""" Return a list of patterns in the project .gitignore
Returns:
list[str]: List of patterns set to be ignored by git.
"""
def parse_line(line): # pylint: disable=missing-docstring
# Decode if necessary
if not isinstance(line, string_types):
line = line.decode('utf-8')
# Strip comment
line = line.split('#', 1)[0].strip()
return line
ignore_files = [
conf.proj_path('.gitignore'),
conf.proj_path('.git/info/exclude'),
config().get('core.excludesfile')
]
result = []
for ignore_file in ignore_files:
if not (ignore_file and os.path.exists(ignore_file)):
continue
with open(ignore_file) as fp:
parsed = (parse_line(l) for l in fp.readlines())
result += [x for x in parsed if x]
return result
|
def branches():
# type: () -> List[str]
""" Return a list of branches in the current repo.
Returns:
list[str]: A list of branches in the current repo.
"""
out = shell.run(
'git branch',
capture=True,
never_pretend=True
).stdout.strip()
return [x.strip('* \t\n') for x in out.splitlines()]
|
def tag(name, message, author=None):
# type: (str, str, Author, bool) -> None
""" Tag the current commit.
Args:
name (str):
The tag name.
message (str):
The tag message. Same as ``-m`` parameter in ``git tag``.
author (Author):
The commit author. Will default to the author of the commit.
pretend (bool):
If set to **True** it will print the full ``git tag`` command
instead of actually executing it.
"""
cmd = (
'git -c "user.name={author.name}" -c "user.email={author.email}" '
'tag -a "{name}" -m "{message}"'
).format(
author=author or latest_commit().author,
name=name,
message=message.replace('"', '\\"').replace('`', '\\`'),
)
shell.run(cmd)
|
def config():
# type: () -> dict[str, Any]
""" Return the current git configuration.
Returns:
dict[str, Any]: The current git config taken from ``git config --list``.
"""
out = shell.run(
'git config --list',
capture=True,
never_pretend=True
).stdout.strip()
result = {}
for line in out.splitlines():
name, value = line.split('=', 1)
result[name.strip()] = value.strip()
return result
|
def tags():
# type: () -> List[str]
""" Returns all tags in the repo.
Returns:
list[str]: List of all tags in the repo, sorted as versions.
All tags returned by this function will be parsed as if the contained
versions (using ``v:refname`` sorting).
"""
return shell.run(
'git tag --sort=v:refname',
capture=True,
never_pretend=True
).stdout.strip().splitlines()
|
def verify_branch(branch_name):
# type: (str) -> bool
""" Verify if the given branch exists.
Args:
branch_name (str):
The name of the branch to check.
Returns:
bool: **True** if a branch with name *branch_name* exits, **False**
otherwise.
"""
try:
shell.run(
'git rev-parse --verify {}'.format(branch_name),
never_pretend=True
)
return True
except IOError:
return False
|
def protected_branches():
# type: () -> list[str]
""" Return branches protected by deletion.
By default those are master and devel branches as configured in pelconf.
Returns:
list[str]: Names of important branches that should not be deleted.
"""
master = conf.get('git.master_branch', 'master')
develop = conf.get('git.devel_branch', 'develop')
return conf.get('git.protected_branches', (master, develop))
|
def branches(self):
# type: () -> List[str]
""" List of all branches this commit is a part of. """
if self._branches is None:
cmd = 'git branch --contains {}'.format(self.sha1)
out = shell.run(
cmd,
capture=True,
never_pretend=True
).stdout.strip()
self._branches = [x.strip('* \t\n') for x in out.splitlines()]
return self._branches
|
def parents(self):
# type: () -> List[CommitDetails]
""" Parents of the this commit. """
if self._parents is None:
self._parents = [CommitDetails.get(x) for x in self.parents_sha1]
return self._parents
|
def number(self):
# type: () -> int
""" Return this commits number.
This is the same as the total number of commits in history up until
this commit.
This value can be useful in some CI scenarios as it allows to track
progress on any given branch (although there can be two commits with the
same number existing on different branches).
Returns:
int: The commit number/index.
"""
cmd = 'git log --oneline {}'.format(self.sha1)
out = shell.run(cmd, capture=True, never_pretend=True).stdout.strip()
return len(out.splitlines())
|
def get(cls, sha1=''):
# type: (str) -> CommitDetails
""" Return details about a given commit.
Args:
sha1 (str):
The sha1 of the commit to query. If not given, it will return
the details for the latest commit.
Returns:
CommitDetails: Commit details. You can use the instance of the
class to query git tree further.
"""
with conf.within_proj_dir():
cmd = 'git show -s --format="%H||%an||%ae||%s||%b||%P" {}'.format(
sha1
)
result = shell.run(cmd, capture=True, never_pretend=True).stdout
sha1, name, email, title, desc, parents = result.split('||')
return CommitDetails(
sha1=sha1,
author=Author(name, email),
title=title,
desc=desc,
parents_sha1=parents.split(),
)
|
def main():
"""Sample usage for this python module
This main method simply illustrates sample usage for this python
module.
:return: None
"""
log = logging.getLogger(Logify.get_name() + '.logify.main')
log.info('logger name is: %s', Logify.get_name())
log.debug('This is DEBUG')
log.info('This is INFO')
log.warning('This is a WARNING')
log.error('This is an ERROR')
|
def set_log_level(cls, log_level):
"""Sets the log level for cons3rt assets
This method sets the logging level for cons3rt assets using
pycons3rt. The loglevel is read in from a deployment property
called loglevel and set appropriately.
:type log_level: str
:return: True if log level was set, False otherwise.
"""
log = logging.getLogger(cls.cls_logger + '.set_log_level')
log.info('Attempting to set the log level...')
if log_level is None:
log.info('Arg loglevel was None, log level will not be updated.')
return False
if not isinstance(log_level, basestring):
log.error('Passed arg loglevel must be a string')
return False
log_level = log_level.upper()
log.info('Attempting to set log level to: %s...', log_level)
if log_level == 'DEBUG':
cls._logger.setLevel(logging.DEBUG)
elif log_level == 'INFO':
cls._logger.setLevel(logging.INFO)
elif log_level == 'WARN':
cls._logger.setLevel(logging.WARN)
elif log_level == 'WARNING':
cls._logger.setLevel(logging.WARN)
elif log_level == 'ERROR':
cls._logger.setLevel(logging.ERROR)
else:
log.error('Could not set log level, this is not a valid log level: %s', log_level)
return False
log.info('pycons3rt loglevel set to: %s', log_level)
return True
|
def get_record_by_name(self, index, name):
"""
Searches for a single document in the given index on the 'name' field .
Performs a case-insensitive search by utilizing Elasticsearch's `match_phrase` query.
Args:
index: `str`. The name of an Elasticsearch index (i.e. biosamples).
name: `str`. The value of a document's name key to search for.
Returns:
`dict` containing the document that was indexed into Elasticsearch.
Raises:
`MultipleHitsException`: More than 1 hit is returned.
"""
result = self.ES.search(
index=index,
body={
"query": {
"match_phrase": {
"name": name,
}
}
}
)
hits = result["hits"]["hits"]
if not hits:
return {}
elif len(hits) == 1:
return hits[0]["_source"]
else:
# Mult. records found with same prefix. See if a single record whose name attr matches
# the match phrase exactly (in a lower-case comparison).
for h in hits:
source = h["_source"]
record_name = source["name"]
if record_name.lower().strip() == name.lower().strip():
return source
msg = "match_phrase search found multiple records matching query '{}' for index '{}'.".format(name, index)
raise MultipleHitsException(msg)
|
def getattr_in(obj, name):
""" Finds an in @obj via a period-delimited string @name.
@obj: (#object)
@name: (#str) |.|-separated keys to search @obj in
..
obj.deep.attr = 'deep value'
getattr_in(obj, 'obj.deep.attr')
..
|'deep value'|
"""
for part in name.split('.'):
obj = getattr(obj, part)
return obj
|
def import_from(name):
""" Imports a module, class or method from string and unwraps it
if wrapped by functools
@name: (#str) name of the python object
-> imported object
"""
obj = name
if isinstance(name, str) and len(name):
try:
obj = locate(name)
assert obj is not None
except (AttributeError, TypeError, AssertionError, ErrorDuringImport):
try:
name = name.split(".")
attr = name[-1]
name = ".".join(name[:-1])
mod = importlib.import_module(name)
obj = getattr(mod, attr)
except (SyntaxError, AttributeError, ImportError, ValueError):
try:
name = name.split(".")
attr_sup = name[-1]
name = ".".join(name[:-1])
mod = importlib.import_module(name)
obj = getattr(getattr(mod, attr_sup), attr)
except:
# We give up.
pass
obj = unwrap_obj(obj)
return obj
|
def unwrap_obj(obj):
""" Gets the actual object from a decorated or wrapped function
@obj: (#object) the object to unwrap
"""
try:
obj = obj.fget
except (AttributeError, TypeError):
pass
try:
# Cached properties
if obj.func.__doc__ == obj.__doc__:
obj = obj.func
except AttributeError:
pass
try:
# Setter/Getters
obj = obj.getter
except AttributeError:
pass
try:
# Wrapped Funcs
obj = inspect.unwrap(obj)
except:
pass
return obj
|
def add_modality(output_path, modality):
"""Modality can be appended to the file name (such as 'bold') or use in the
folder (such as "func"). You should always use the specific modality ('bold').
This function converts it to the folder name.
"""
if modality is None:
return output_path
else:
if modality in ('T1w', 'T2star', 'FLAIR', 'PD'):
modality = 'anat'
elif modality == 'bold':
modality = 'func'
elif modality == 'epi': # topup
modality = 'fmap'
elif modality in ('electrodes', 'coordsystem', 'channels'):
modality = 'ieeg'
elif modality == 'events':
raise ValueError('modality "events" is ambiguous (can be in folder "ieeg" or "func"). Assuming "ieeg"')
return output_path / modality
|
def load():
# type: () -> None
""" Load configuration from file.
This will search the directory structure upwards to find the project root
(directory containing ``pelconf.py`` file). Once found it will import the
config file which should initialize all the configuration (using
`peltak.core.conf.init()` function).
You can also have both yaml (configuration) and python (custom commands)
living together. Just remember that calling `conf.init()` will overwrite
the config defined in YAML.
"""
with within_proj_dir():
if os.path.exists('pelconf.yaml'):
load_yaml_config('pelconf.yaml')
if os.path.exists('pelconf.py'):
load_py_config('pelconf.py')
|
def load_yaml_config(conf_file):
# type: (str) -> None
""" Load a YAML configuration.
This will not update the configuration but replace it entirely.
Args:
conf_file (str):
Path to the YAML config. This function will not check the file name
or extension and will just crash if the given file does not exist or
is not a valid YAML file.
"""
global g_config
with open(conf_file) as fp:
# Initialize config
g_config = util.yaml_load(fp)
# Add src_dir to sys.paths if it's set. This is only done with YAML
# configs, py configs have to do this manually.
src_dir = get_path('src_dir', None)
if src_dir is not None:
sys.path.insert(0, src_dir)
for cmd in get('commands', []):
_import(cmd)
|
def load_py_config(conf_file):
# type: (str) -> None
""" Import configuration from a python file.
This will just import the file into python. Sky is the limit. The file
has to deal with the configuration all by itself (i.e. call conf.init()).
You will also need to add your src directory to sys.paths if it's not the
current working directory. This is done automatically if you use yaml
config as well.
Args:
conf_file (str):
Path to the py module config. This function will not check the file
name or extension and will just crash if the given file does not
exist or is not a valid python file.
"""
if sys.version_info >= (3, 5):
from importlib import util
spec = util.spec_from_file_location('pelconf', conf_file)
mod = util.module_from_spec(spec)
spec.loader.exec_module(mod)
elif sys.version_info >= (3, 3):
from importlib import machinery
loader = machinery.SourceFileLoader('pelconf', conf_file)
_ = loader.load_module()
elif sys.version_info <= (3, 0):
import imp
imp.load_source('pelconf', conf_file)
|
def load_template(filename):
# type: (str) -> str
""" Load template from file.
The templates are part of the package and must be included as
``package_data`` in project ``setup.py``.
Args:
filename (str):
The template path. Relative to `peltak` package directory.
Returns:
str: The content of the chosen template.
"""
template_file = os.path.join(PKG_DIR, 'templates', filename)
with open(template_file) as fp:
return fp.read()
|
def proj_path(*path_parts):
# type: (str) -> str
""" Return absolute path to the repo dir (root project directory).
Args:
path (str):
The path relative to the project root (pelconf.yaml).
Returns:
str: The given path converted to an absolute path.
"""
path_parts = path_parts or ['.']
# If path represented by path_parts is absolute, do not modify it.
if not os.path.isabs(path_parts[0]):
proj_path = _find_proj_root()
if proj_path is not None:
path_parts = [proj_path] + list(path_parts)
return os.path.normpath(os.path.join(*path_parts))
|
def within_proj_dir(path='.'):
# type: (Optional[str]) -> str
""" Return an absolute path to the given project relative path.
:param path:
Project relative path that will be converted to the system wide absolute
path.
:return:
Absolute path.
"""
curr_dir = os.getcwd()
os.chdir(proj_path(path))
yield
os.chdir(curr_dir)
|
def get(name, *default):
# type: (str, Any) -> Any
""" Get config value with the given name and optional default.
Args:
name (str):
The name of the config value.
*default (Any):
If given and the key doesn't not exist, this will be returned
instead. If it's not given and the config value does not exist,
AttributeError will be raised
Returns:
The requested config value. This is one of the global values defined
in this file. If the value does not exist it will return `default` if
give or raise `AttributeError`.
Raises:
AttributeError: If the value does not exist and `default` was not given.
"""
global g_config
curr = g_config
for part in name.split('.'):
if part in curr:
curr = curr[part]
elif default:
return default[0]
else:
raise AttributeError("Config value '{}' does not exist".format(
name
))
return curr
|
def get_path(name, *default):
# type: (str, Any) -> Any
""" Get config value as path relative to the project directory.
This allows easily defining the project configuration within the fabfile
as always relative to that fabfile.
Args:
name (str):
The name of the config value containing the path.
*default (Any):
If given and the key doesn't not exist, this will be returned
instead. If it's not given and the config value does not exist,
AttributeError will be raised
Returns:
The requested config value. This is one of the global values defined
in this file. If the value does not exist it will return `default` if
give or raise `AttributeError`.
Raises:
AttributeError: If the value does not exist and `default` was not given.
"""
global g_config
value = get(name, *default)
if value is None:
return None
return proj_path(value)
|
def _find_proj_root():
# type: () -> Optional[str]
""" Find the project path by going up the file tree.
This will look in the current directory and upwards for the pelconf file
(.yaml or .py)
"""
proj_files = frozenset(('pelconf.py', 'pelconf.yaml'))
curr = os.getcwd()
while curr.startswith('/') and len(curr) > 1:
if proj_files & frozenset(os.listdir(curr)):
return curr
else:
curr = os.path.dirname(curr)
return None
|
def verify(verified_entity, verification_key):
"""
Метод должен райзить ошибки
:param verified_entity: сущность
:param verification_key: ключ
:return:
"""
verification = get_object_or_none(Verification, verified_entity=verified_entity)
if verification is None:
raise ServerError(VerificationHandler.STATUS_VERIFICATION_NOT_FOUND)
if not verification.verify(verification_key):
raise ServerError(VerificationHandler.STATUS_INVALID_VERIFICATION_KEY)
verification.verified = True
verification.save()
|
def _xml_element_value(el: Element, int_tags: list):
"""
Gets XML Element value.
:param el: Element
:param int_tags: List of tags that should be treated as ints
:return: value of the element (int/str)
"""
# None
if el.text is None:
return None
# int
try:
if el.tag in int_tags:
return int(el.text)
except:
pass
# default to str if not empty
s = str(el.text).strip()
return s if s else None
|
def _xml_tag_filter(s: str, strip_namespaces: bool) -> str:
"""
Returns tag name and optionally strips namespaces.
:param el: Element
:param strip_namespaces: Strip namespace prefix
:return: str
"""
if strip_namespaces:
ns_end = s.find('}')
if ns_end != -1:
s = s[ns_end+1:]
else:
ns_end = s.find(':')
if ns_end != -1:
s = s[ns_end+1:]
return s
|
def xml_to_dict(xml_bytes: bytes, tags: list=[], array_tags: list=[], int_tags: list=[],
strip_namespaces: bool=True, parse_attributes: bool=True,
value_key: str='@', attribute_prefix: str='@',
document_tag: bool=False) -> dict:
"""
Parses XML string to dict. In case of simple elements (no children, no attributes) value is stored as is.
For complex elements value is stored in key '@', attributes '@xxx' and children as sub-dicts.
Optionally strips namespaces.
For example:
<Doc version="1.2">
<A class="x">
<B class="x2">hello</B>
</A>
<A class="y">
<B class="y2">world</B>
</A>
<C>value node</C>
</Doc>
is returned as follows:
{'@version': '1.2',
'A': [{'@class': 'x', 'B': {'@': 'hello', '@class': 'x2'}},
{'@class': 'y', 'B': {'@': 'world', '@class': 'y2'}}],
'C': 'value node'}
Args:
xml_bytes: XML file contents in bytes
tags: list of tags to parse (pass empty to return all chilren of top-level tag)
array_tags: list of tags that should be treated as arrays by default
int_tags: list of tags that should be treated as ints
strip_namespaces: if true namespaces will be stripped
parse_attributes: Elements with attributes are stored as complex types with '@' identifying text value and @xxx identifying each attribute
value_key: Key to store (complex) element value. Default is '@'
attribute_prefix: Key prefix to store element attribute values. Default is '@'
document_tag: Set True if Document root tag should be included as well
Returns: dict
"""
from xml.etree import ElementTree as ET
root = ET.fromstring(xml_bytes)
if tags:
if document_tag:
raise Exception('xml_to_dict: document_tag=True does not make sense when using selective tag list since selective tag list finds tags from the whole document, not only directly under root document tag')
root_elements = []
for tag in tags:
root_elements.extend(root.iter(tag))
else:
root_elements = list(root)
data = {}
for el in root_elements:
_xml_set_element_data_r(data, el, array_tags=array_tags, int_tags=int_tags,
strip_namespaces=strip_namespaces, parse_attributes=parse_attributes,
value_key=value_key, attribute_prefix=attribute_prefix)
# set root attributes
if parse_attributes:
for a_key, a_val in root.attrib.items():
data[attribute_prefix + _xml_tag_filter(a_key, strip_namespaces)] = a_val
return data if not document_tag else {root.tag: data}
|
def dict_to_element(doc: dict, value_key: str='@', attribute_prefix: str='@') -> Element:
"""
Generates XML Element from dict.
Generates complex elements by assuming element attributes are prefixed with '@', and value is stored to plain '@'
in case of complex element. Children are sub-dicts.
For example:
{
'Doc': {
'@version': '1.2',
'A': [{'@class': 'x', 'B': {'@': 'hello', '@class': 'x2'}},
{'@class': 'y', 'B': {'@': 'world', '@class': 'y2'}}],
'C': 'value node',
}
}
is returned as follows:
<?xml version="1.0" ?>
<Doc version="1.2">
<A class="x">
<B class="x2">hello</B>
</A>
<A class="y">
<B class="y2">world</B>
</A>
<C>value node</C>
</Doc>
Args:
doc: dict. Must have sigle root key dict.
value_key: Key to store (complex) element value. Default is '@'
attribute_prefix: Key prefix to store element attribute values. Default is '@'
Returns: xml.etree.ElementTree.Element
"""
from xml.etree import ElementTree as ET
if len(doc) != 1:
raise Exception('Invalid data dict for XML generation, document root must have single element')
for tag, data in doc.items():
el = ET.Element(tag)
assert isinstance(el, Element)
_xml_element_set_data_r(el, data, value_key, attribute_prefix)
return el
|
def local_property():
""" Property structure which maps within the :func:local() thread
(c)2014, Marcel Hellkamp
"""
ls = local()
def fget(self):
try:
return ls.var
except AttributeError:
raise RuntimeError("Request context not initialized.")
def fset(self, value):
ls.var = value
def fdel(self):
del ls.var
return property(fget, fset, fdel, 'Thread-local property')
|
def download(download_info):
"""Module method for downloading from S3
This public module method takes a key and the full path to
the destination directory, assumes that the args have been
validated by the public caller methods, and attempts to
download the specified key to the dest_dir.
:param download_info: (dict) Contains the following params
key: (str) S3 key for the file to be downloaded
dest_dir: (str) Full path destination directory
bucket_name: (str) Name of the bucket to download from
credentials: (dict) containing AWS credential info (optional)
aws_region: (str) AWS S3 region
aws_access_key_id: (str) AWS access key ID
aws_secret_access_key: (str) AWS secret access key
:return: (str) Downloaded file destination if the file was
downloaded successfully
:raises S3UtilError
"""
log = logging.getLogger(mod_logger + '.download')
# Ensure the passed arg is a dict
if not isinstance(download_info, dict):
msg = 'download_info arg should be a dict, found: {t}'.format(t=download_info.__class__.__name__)
raise TypeError(msg)
# Check for and obtain required args
required_args = ['key', 'dest_dir', 'bucket_name']
for required_arg in required_args:
if required_arg not in download_info:
msg = 'Required arg not provided: {r}'.format(r=required_arg)
log.error(msg)
raise S3UtilError(msg)
log.debug('Processing download request: {r}'.format(r=download_info))
key = download_info['key']
dest_dir = download_info['dest_dir']
bucket_name = download_info['bucket_name']
region_name = None
aws_access_key_id = None
aws_secret_access_key = None
try:
creds = download_info['credentials']
except KeyError:
log.debug('No credentials found for this download request')
else:
try:
region_name = creds['region_name']
aws_access_key_id = creds['aws_access_key_id']
aws_secret_access_key = creds['aws_secret_access_key']
except KeyError:
log.warn('Insufficient credentials found for download request')
region_name = None
aws_access_key_id = None
aws_secret_access_key = None
log.debug('Configuring S3 client with AWS Access key ID {k} and region {r}'.format(
k=aws_access_key_id, r=region_name))
# Establish an S3 client
client = boto3.client('s3', region_name=region_name, aws_access_key_id=aws_access_key_id,
aws_secret_access_key=aws_secret_access_key)
# Attempt to determine the file name from key
filename = key.split('/')[-1]
if filename is None:
msg = 'Could not determine the filename from key: {k}'.format(k=key)
log.error(msg)
raise S3UtilError(msg)
# Set the destination
destination = os.path.join(dest_dir, filename)
# Return if the destination file was already downloaded
if os.path.isfile(destination):
log.info('File already downloaded: {d}'.format(d=destination))
return destination
# Attempt the download
log.info('Attempting to download %s from bucket %s to destination %s',
key, bucket_name, destination)
max_tries = 10
retry_timer = 5
count = 1
while count <= max_tries:
log.info('Attempting to download file {k}: try {c} of {m}'.format(k=key, c=count, m=max_tries))
try:
client.download_file(Bucket=bucket_name, Key=key, Filename=destination)
except ClientError:
if count >= max_tries:
_, ex, trace = sys.exc_info()
msg = 'Unable to download key {k} from S3 bucket {b}:\n{e}'.format(k=key, b=bucket_name, e=str(ex))
log.error(msg)
raise S3UtilError, msg, trace
else:
log.warn('Download failed, re-trying in {t} sec...'.format(t=retry_timer))
count += 1
time.sleep(retry_timer)
continue
else:
log.info('Successfully downloaded {k} from S3 bucket {b} to: {d}'.format(
k=key, b=bucket_name, d=destination))
return destination
|
def find_bucket_keys(bucket_name, regex, region_name=None, aws_access_key_id=None, aws_secret_access_key=None):
"""Finds a list of S3 keys matching the passed regex
Given a regular expression, this method searches the S3 bucket
for matching keys, and returns an array of strings for matched
keys, an empty array if non are found.
:param regex: (str) Regular expression to use is the key search
:param bucket_name: (str) String S3 bucket name
:param region_name: (str) AWS region for the S3 bucket (optional)
:param aws_access_key_id: (str) AWS Access Key ID (optional)
:param aws_secret_access_key: (str) AWS Secret Access Key (optional)
:return: Array of strings containing matched S3 keys
"""
log = logging.getLogger(mod_logger + '.find_bucket_keys')
matched_keys = []
if not isinstance(regex, basestring):
log.error('regex argument is not a string, found: {t}'.format(t=regex.__class__.__name__))
return None
if not isinstance(bucket_name, basestring):
log.error('bucket_name argument is not a string, found: {t}'.format(t=bucket_name.__class__.__name__))
return None
# Set up S3 resources
s3resource = boto3.resource('s3', region_name=region_name, aws_access_key_id=aws_access_key_id,
aws_secret_access_key=aws_secret_access_key)
bucket = s3resource.Bucket(bucket_name)
log.info('Looking up S3 keys based on regex: {r}'.format(r=regex))
for item in bucket.objects.all():
log.debug('Checking if regex matches key: {k}'.format(k=item.key))
match = re.search(regex, item.key)
if match:
matched_keys.append(item.key)
log.info('Found matching keys: {k}'.format(k=matched_keys))
return matched_keys
|
def main():
"""Sample usage for this python module
This main method simply illustrates sample usage for this python
module.
:return: None
"""
log = logging.getLogger(mod_logger + '.main')
log.debug('This is DEBUG!')
log.info('This is INFO!')
log.warning('This is WARNING!')
log.error('This is ERROR!')
log.info('Running s3util.main...')
my_bucket = 'cons3rt-deploying-cons3rt'
my_regex = 'sourcebuilder.*apache-maven-.*3.3.3.*'
try:
s3util = S3Util(my_bucket)
except S3UtilError as e:
log.error('There was a problem creating S3Util:\n%s', e)
else:
log.info('Created S3Util successfully')
key = s3util.find_key(my_regex)
test = None
if key is not None:
test = s3util.download_file(key, '/Users/yennaco/Downloads')
if test is not None:
upload = s3util.upload_file(test, 'media-files-offline-assets/test')
log.info('Upload result: %s', upload)
log.info('End of main!')
|
def validate_bucket(self):
"""Verify the specified bucket exists
This method validates that the bucket name passed in the S3Util
constructor actually exists.
:return: None
"""
log = logging.getLogger(self.cls_logger + '.validate_bucket')
log.info('Attempting to get bucket: {b}'.format(b=self.bucket_name))
max_tries = 10
count = 1
while count <= max_tries:
log.info('Attempting to connect to S3 bucket %s, try %s of %s',
self.bucket_name, count, max_tries)
try:
self.s3client.head_bucket(Bucket=self.bucket_name)
except ClientError as e:
_, ex, trace = sys.exc_info()
error_code = int(e.response['Error']['Code'])
log.debug(
'Connecting to bucket %s produced response code: %s',
self.bucket_name, error_code)
if error_code == 404:
msg = 'Error 404 response indicates that bucket {b} does not ' \
'exist:\n{e}'.format(b=self.bucket_name, e=str(ex))
log.error(msg)
raise S3UtilError, msg, trace
elif error_code == 500 or error_code == 503:
if count >= max_tries:
msg = 'S3 bucket is not accessible at this time: {b}\n{e}'.format(
b=self.bucket_name, e=str(ex))
log.error(msg)
raise S3UtilError, msg, trace
else:
log.warn('AWS returned error code 500 or 503, re-trying in 2 sec...')
time.sleep(5)
count += 1
continue
else:
msg = 'Connecting to S3 bucket {b} returned code: {c}\n{e}'.\
format(b=self.bucket_name, c=error_code, e=str(ex))
log.error(msg)
raise S3UtilError, msg, trace
else:
log.info('Found bucket: %s', self.bucket_name)
return
|
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