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def partition(iterable, chunk_size, pad_none=False): """adapted from Toolz. Breaks an iterable into n iterables up to the certain chunk size, padding with Nones if availble. Example: >>> from searchtweets.utils import partition >>> iter_ = range(10) >>> list(partition(iter_, 3)) ...
def merge_dicts(*dicts): """ Helpful function to merge / combine dictionaries and return a new dictionary. Args: dicts (list or Iterable): iterable set of dictionaries for merging. Returns: dict: dict with all keys from the passed list. Later dictionaries in the sequence wi...
def write_ndjson(filename, data_iterable, append=False, **kwargs): """ Generator that writes newline-delimited json to a file and returns items from an iterable. """ write_mode = "ab" if append else "wb" logger.info("writing to file {}".format(filename)) with codecs.open(filename, write_mode...
def write_result_stream(result_stream, filename_prefix=None, results_per_file=None, **kwargs): """ Wraps a ``ResultStream`` object to save it to a file. This function will still return all data from the result stream as a generator that wraps the ``write_ndjson`` method. Arg...
def read_config(filename): """Reads and flattens a configuration file into a single dictionary for ease of use. Works with both ``.config`` and ``.yaml`` files. Files should look like this:: search_rules: from-date: 2017-06-01 to-date: 2017-09-01 01:01 pt-rule: k...
def _load_yaml_credentials(filename=None, yaml_key=None): """Loads and parses credentials in a YAML file. Catches common exceptions and returns an empty dict on error, which will be handled downstream. Returns: dict: parsed credentials or {} """ try: with open(os.path.expanduser(fil...
def load_credentials(filename=None, account_type=None, yaml_key=None, env_overwrite=True): """ Handles credential management. Supports both YAML files and environment variables. A YAML file is preferred for simplicity and configureability. A YAML credential file should look somethin...
def _generate_bearer_token(consumer_key, consumer_secret): """ Return the bearer token for a given pair of consumer key and secret values. """ data = [('grant_type', 'client_credentials')] resp = requests.post(OAUTH_ENDPOINT, data=data, auth=(consume...
def email(value, whitelist=None): """ Validate an email address. This validator is based on `Django's email validator`_. Returns ``True`` on success and :class:`~validators.utils.ValidationFailure` when validation fails. Examples:: >>> email('someone@example.com') True ...
def fi_business_id(business_id): """ Validate a Finnish Business ID. Each company in Finland has a distinct business id. For more information see `Finnish Trade Register`_ .. _Finnish Trade Register: http://en.wikipedia.org/wiki/Finnish_Trade_Register Examples:: >>> fi_busine...
def fi_ssn(ssn, allow_temporal_ssn=True): """ Validate a Finnish Social Security Number. This validator is based on `django-localflavor-fi`_. .. _django-localflavor-fi: https://github.com/django/django-localflavor-fi/ Examples:: >>> fi_ssn('010101-0101') True >>>...
def modcheck(value): """Check if the value string passes the mod97-test. """ # move country code and check numbers to end rearranged = value[4:] + value[:4] # convert letters to numbers converted = [char_value(char) for char in rearranged] # interpret as integer integerized = int(''.join...
def func_args_as_dict(func, args, kwargs): """ Return given function's positional and key value arguments as an ordered dictionary. """ if six.PY2: _getargspec = inspect.getargspec else: _getargspec = inspect.getfullargspec arg_names = list( OrderedDict.fromkeys( ...
def validator(func, *args, **kwargs): """ A decorator that makes given function validator. Whenever the given function is called and returns ``False`` value this decorator returns :class:`ValidationFailure` object. Example:: >>> @validator ... def even(value): ... retu...
def length(value, min=None, max=None): """ Return whether or not the length of given string is within a specified range. Examples:: >>> length('something', min=2) True >>> length('something', min=9, max=9) True >>> length('something', max=5) Validation...
def url(value, public=False): """ Return whether or not given value is a valid URL. If the value is valid URL this function returns ``True``, otherwise :class:`~validators.utils.ValidationFailure`. This validator is based on the wonderful `URL validator of dperini`_. .. _URL validator of dper...
def between(value, min=None, max=None): """ Validate that a number is between minimum and/or maximum value. This will work with any comparable type, such as floats, decimals and dates not just integers. This validator is originally based on `WTForms NumberRange validator`_. .. _WTForms Number...
def ipv4(value): """ Return whether or not given value is a valid IP version 4 address. This validator is based on `WTForms IPAddress validator`_ .. _WTForms IPAddress validator: https://github.com/wtforms/wtforms/blob/master/wtforms/validators.py Examples:: >>> ipv4('123.0.0.7') ...
def ipv6(value): """ Return whether or not given value is a valid IP version 6 address (including IPv4-mapped IPv6 addresses). This validator is based on `WTForms IPAddress validator`_. .. _WTForms IPAddress validator: https://github.com/wtforms/wtforms/blob/master/wtforms/validators.py ...
def get_version(module_name_or_file=None): """Return the current version as defined by the given module/file.""" if module_name_or_file is None: parts = base_module.split('.') module_name_or_file = parts[0] if len(parts) > 1 else \ find_packages(exclude=['test', 'test.*'])[0] i...
def post_report(coverage, args): """Post coverage report to coveralls.io.""" response = requests.post(URL, files={'json_file': json.dumps(coverage)}, verify=(not args.skip_ssl_verify)) try: result = response.json() except ValueError: result = {'error': 'Failu...
def is_source_file(args, filepath): """Returns true if it is a C++ source file.""" if args.extension: return os.path.splitext(filepath)[1] in args.extension else: return os.path.splitext(filepath)[1] in _CPP_EXTENSIONS
def exclude_paths(args): """Returns the absolute paths for excluded path.""" results = [] if args.exclude: for excl_path in args.exclude: results.append(os.path.abspath(os.path.join(args.root, excl_path))) return results
def create_exclude_rules(args): """Creates the exlude rules """ global _cached_exclude_rules if _cached_exclude_rules is not None: return _cached_exclude_rules rules = [] for excl_path in args.exclude: abspath = os.path.abspath(os.path.join(args.root, excl_path)) rules.ap...
def is_excluded_path(args, filepath): """Returns true if the filepath is under the one of the exclude path.""" # Try regular expressions first. for regexp_exclude_path in args.regexp: if re.match(regexp_exclude_path, filepath): return True abspath = os.path.abspath(filepath) if a...
def filter_dirs(root, dirs, excl_paths): """Filter directory paths based on the exclusion rules defined in 'excl_paths'. """ filtered_dirs = [] for dirpath in dirs: abspath = os.path.abspath(os.path.join(root, dirpath)) if os.path.basename(abspath) in _SKIP_DIRS: continue...
def parse_gcov_file(args, fobj, filename): """Parses the content of .gcov file """ coverage = [] ignoring = False for line in fobj: report_fields = line.decode('utf-8', 'replace').split(':', 2) if len(report_fields) == 1: continue line_num = report_fields[1].strip...
def parse_lcov_file_info(args, filepath, line_iter, line_coverage_re, file_end_string): """ Parse the file content in lcov info file """ coverage = [] lines_covered = [] for line in line_iter: if line != "end_of_record": line_coverage_match = line_coverage_re.match(line) ...
def combine_reports(original, new): """Combines two gcov reports for a file into one by adding the number of hits on each line """ if original is None: return new report = {} report['name'] = original['name'] report['source_digest'] = original['source_digest'] coverage = [] for o...
def collect_non_report_files(args, discovered_files): """Collects the source files that have no coverage reports. """ excl_paths = exclude_paths(args) abs_root = os.path.abspath(args.root) non_report_files = [] for root, dirs, files in os.walk(args.root, followlinks=args.follow_symlinks): ...
def collect(args): """Collect coverage reports.""" excl_paths = exclude_paths(args) report = {} if args.repo_token: report['repo_token'] = args.repo_token report['service_name'] = args.service_name report['service_job_id'] = args.service_job_id if os.getenv('COVERALLS_PARALLEL', F...
def parse_yaml_config(args): """Parse yaml config""" try: import yaml except ImportError: yaml = None yml = {} try: with open(args.coveralls_yaml, 'r') as fp: if not yaml: raise SystemExit('PyYAML is required for parsing configuration') ...
def run(): """Run cpp coverage.""" import json import os import sys from . import coverage, report args = coverage.create_args(sys.argv[1:]) if args.verbose: print('encodings: {}'.format(args.encodings)) yml = parse_yaml_config(args) if not args.repo_token: # try ...
def gitrepo(cwd): """Return hash of Git data that can be used to display more information to users. Example: "git": { "head": { "id": "5e837ce92220be64821128a70f6093f836dd2c05", "author_name": "Wil Gieseler", "author_email": "wil@example.c...
def git(self, *arguments): """ Return (exit code, output) from git. """ process = subprocess.Popen(['git'] + list(arguments), stdout=subprocess.PIPE, cwd=self.cwd) out = process.communicate()[0].decode('UTF-8')...
def _verify(function): """decorator to ensure pin is properly set up""" # @functools.wraps def wrapped(pin, *args, **kwargs): pin = int(pin) if pin not in _open: ppath = gpiopath(pin) if not os.path.exists(ppath): log.debug("Creating Pin {0}".f...
def cleanup(pin=None, assert_exists=False): """Cleanup the pin by closing and unexporting it. Args: pin (int, optional): either the pin to clean up or None (default). If None, clean up all pins. assert_exists: if True, raise a ValueError if the pin was not setup. ...
def setup(pin, mode, pullup=None, initial=False): '''Setup pin with mode IN or OUT. Args: pin (int): mode (str): use either gpio.OUT or gpio.IN pullup (None): rpio compatibility. If anything but None, raises value Error pullup (bool, optional): Initial pin va...
def read(pin): '''read the pin value Returns: bool: 0 or 1 ''' f = _open[pin].value out = int(_read(f)) log.debug("Read {0}: {1}".format(pin, out)) return out
def set(pin, value): '''set the pin value to 0 or 1''' if value is LOW: value = 0 value = int(bool(value)) log.debug("Write {0}: {1}".format(pin, value)) f = _open[pin].value _write(f, value)
def tqdm(self, desc, total, leave, initial=0): """ Extension point. Override to provide custom options to tqdm initializer. :param desc: Description string :param total: Total number of updates :param leave: Leave progress bar when done :param initial: Initial counter sta...
def build_tqdm_outer(self, desc, total): """ Extension point. Override to provide custom options to outer progress bars (Epoch loop) :param desc: Description :param total: Number of epochs :return: new progress bar """ return self.tqdm(desc=desc, total=total, leav...
def build_tqdm_inner(self, desc, total): """ Extension point. Override to provide custom options to inner progress bars (Batch loop) :param desc: Description :param total: Number of batches :return: new progress bar """ return self.tqdm(desc=desc, total=total, lea...
def tqdm(self, desc, total, leave, initial=0): """ Extension point. Override to provide custom options to tqdm_notebook initializer. :param desc: Description string :param total: Total number of updates :param leave: Leave progress bar when done :return: new progress bar ...
def end(self): """Close the V interface. Args:: No argument Returns:: None C library equivalent : Vend """ # Note: Vend is just a macro; use 'Vfinish' instead # Note also the the same C function is ...
def attach(self, num_name, write=0): """Open an existing vgroup given its name or its reference number, or create a new vgroup, returning a VG instance for that vgroup. Args:: num_name reference number or name of the vgroup to open, or -1 to creat...
def create(self, name): """Create a new vgroup, and assign it a name. Args:: name name to assign to the new vgroup Returns:: VG instance for the new vgroup A create(name) call is equivalent to an attach(-1, 1) call, followed by a call to the setname(nam...
def find(self, name): """Find a vgroup given its name, returning its reference number if found. Args:: name name of the vgroup to find Returns:: vgroup reference number An exception is raised if the vgroup is not found. C library equivalent: ...
def findclass(self, name): """Find a vgroup given its class name, returning its reference number if found. Args:: name class name of the vgroup to find Returns:: vgroup reference number An exception is raised if the vgroup is not found. C lib...
def delete(self, num_name): """Delete from the HDF file the vgroup identified by its reference number or its name. Args:: num_name either the reference number or the name of the vgroup to delete Returns:: None C library equivalent...
def getid(self, ref): """Obtain the reference number of the vgroup following the vgroup with the given reference number . Args:: ref reference number of the vgroup after which to search; set to -1 to start the search at the start of the HDF file ...
def insert(self, inst): """Insert a vdata or a vgroup in the vgroup. Args:: inst vdata or vgroup instance to add Returns:: index of the inserted vdata or vgroup (0 based) C library equivalent : Vinsert """ ...
def add(self, tag, ref): """Add to the vgroup an object identified by its tag and reference number. Args:: tag tag of the object to add ref reference number of the object to add Returns:: total number of objects in the vgroup after the additi...
def delete(self, tag, ref): """Delete from the vgroup the member identified by its tag and reference number. Args:: tag tag of the member to delete ref reference number of the member to delete Returns:: None Only the link of the member wit...
def tagref(self, index): """Get the tag and reference number of a vgroup member, given the index number of that member. Args:: index member index (0 based) Returns:: 2-element tuple: - member tag - member reference number C libra...
def tagrefs(self): """Get the tags and reference numbers of all the vgroup members. Args:: no argument Returns:: list of (tag,ref) tuples, one for each vgroup member C library equivalent : Vgettagrefs ...
def inqtagref(self, tag, ref): """Determines if an object identified by its tag and reference number belongs to the vgroup. Args:: tag tag of the object to check ref reference number of the object to check Returns:: False (0) if the object does...
def nrefs(self, tag): """Determine the number of tags of a given type in a vgroup. Args:: tag tag type to look for in the vgroup Returns:: number of members identified by this tag type C library equivalent : Vnrefs ...
def attrinfo(self): """Return info about all the vgroup attributes. Args:: no argument Returns:: dictionnary describing each vgroup attribute; for each attribute, a (name,data) pair is added to the dictionary, where 'data' is a tuple holding: ...
def findattr(self, name): """Search the vgroup for a given attribute. Args:: name attribute name Returns:: if found, VGAttr instance describing the attribute None otherwise C library equivalent : Vfindattr ...
def get(self): """Retrieve the attribute value. Args:: no argument Returns:: attribute value(s); a list is returned if the attribute is made up of more than one value, except in the case of a string-valued attribute (data type HC.CHAR8) where the ...
def info(self): """Retrieve info about the attribute. Args:: no argument Returns:: 4-element tuple with the following components: -attribute name -attribute data type (one of HC.xxx constants) -attribute order (number of values) ...
def info(self): """Retrieve info about the attribute : name, data type and number of values. Args:: no argument Returns:: 3-element tuple holding: - attribute name - attribute data type (see constants SDC.xxx) - number of values in t...
def index(self): """Retrieve the attribute index number. Args:: no argument Returns:: attribute index number (starting at 0) C library equivalent : SDfindattr """ self._index = _C.SDfindattr(self._obj._id, sel...
def get(self): """Retrieve the attribute value. Args:: no argument Returns:: attribute value(s); a list is returned if the attribute is made up of more than one value, except in the case of a string-valued attribute (data type SDC.CHAR8) where the ...
def set(self, data_type, values): """Update/Create a new attribute and set its value(s). Args:: data_type : attribute data type (see constants SDC.xxx) values : attribute value(s); specify a list to create a multi-valued attribute; a string valued ...
def end(self): """End access to the SD interface and close the HDF file. Args:: no argument Returns:: None The instance should not be used afterwards. The 'end()' method is implicitly called when the SD instance is deleted. C library ...
def info(self): """Retrieve information about the SD interface. Args:: no argument Returns:: 2-element tuple holding: number of datasets inside the file number of file attributes C library equivalent : SDfileinfo ...
def nametoindex(self, sds_name): """Return the index number of a dataset given the dataset name. Args:: sds_name : dataset name Returns:: index number of the dataset C library equivalent : SDnametoindex """ ...
def reftoindex(self, sds_ref): """Returns the index number of a dataset given the dataset reference number. Args:: sds_ref : dataset reference number Returns:: dataset index number C library equivalent : SDreftoindex ...
def setfillmode(self, fill_mode): """Set the fill mode for all the datasets in the file. Args:: fill_mode : fill mode; one of : SDC.FILL write the fill value to all the datasets of the file by default SDC.NOF...
def create(self, name, data_type, dim_sizes): """Create a dataset. Args:: name dataset name data_type type of the data, set to one of the SDC.xxx constants; dim_sizes lengths of the dataset dimensions; a one- ...
def select(self, name_or_index): """Locate a dataset. Args:: name_or_index dataset name or index number Returns:: SDS instance for the dataset C library equivalent : SDselect """ if isi...
def attributes(self, full=0): """Return a dictionnary describing every global attribute attached to the SD interface. Args:: full true to get complete info about each attribute false to report only each attribute value Returns:: Empty dict...
def datasets(self): """Return a dictionnary describing all the file datasets. Args:: no argument Returns:: Empty dictionnary if no dataset is defined. Otherwise, dictionnary whose keys are the file dataset names, and values are tuples describing the co...
def endaccess(self): """Terminates access to the SDS. Args:: no argument Returns:: None. The SDS instance should not be used afterwards. The 'endaccess()' method is implicitly called when the SDS instance is deleted. C library equivalent ...
def dim(self, dim_index): """Get an SDim instance given a dimension index number. Args:: dim_index index number of the dimension (numbering starts at 0) C library equivalent : SDgetdimid """ id = _C.SDgetdimid(self._id, dim...
def get(self, start=None, count=None, stride=None): """Read data from the dataset. Args:: start : indices where to start reading in the data array; default to 0 on all dimensions count : number of values to read along each dimension; defa...
def set(self, data, start=None, count=None, stride=None): """Write data to the dataset. Args:: data : array of data to write; can be given as a numpy array, or as Python sequence (whose elements can be imbricated sequences) start : indic...
def info(self): """Retrieves information about the dataset. Args:: no argument Returns:: 5-element tuple holding: - dataset name - dataset rank (number of dimensions) - dataset shape, that is a list giving the length of each data...
def checkempty(self): """Determine whether the dataset is empty. Args:: no argument Returns:: True(1) if dataset is empty, False(0) if not C library equivalent : SDcheckempty """ status, emptySDS = _C.SDch...
def ref(self): """Get the reference number of the dataset. Args:: no argument Returns:: dataset reference number C library equivalent : SDidtoref """ sds_ref = _C.SDidtoref(self._id) _checkErr('idtore...
def getcal(self): """Retrieve the SDS calibration coefficients. Args:: no argument Returns:: 5-element tuple holding: - cal: calibration factor (attribute 'scale_factor') - cal_error : calibration factor error (attribute 'scale...
def getdatastrs(self): """Retrieve the dataset standard string attributes. Args:: no argument Returns:: 4-element tuple holding: - dataset label string (attribute 'long_name') - dataset unit (attribute 'units') - dataset output format (attri...
def getrange(self): """Retrieve the dataset min and max values. Args:: no argument Returns:: (min, max) tuple (attribute 'valid_range') Note that those are the values as stored by the 'setrange' method. 'getrange' does *NOT* compute the min ...
def setcal(self, cal, cal_error, offset, offset_err, data_type): """Set the dataset calibration coefficients. Args:: cal the calibraton factor (attribute 'scale_factor') cal_error calibration factor error (attribute 'scale_factor_err') offs...
def setdatastrs(self, label, unit, format, coord_sys): """Set the dataset standard string type attributes. Args:: label dataset label (attribute 'long_name') unit dataset unit (attribute 'units') format dataset format (attribute 'format') ...
def setfillvalue(self, fill_val): """Set the dataset fill value. Args:: fill_val dataset fill value (attribute '_FillValue') Returns:: None The fill value is part of the so-called "standard" SDS attributes. Calling 'setfillvalue' is equivalent to settin...
def setrange(self, min, max): """Set the dataset min and max values. Args:: min dataset minimum value (attribute 'valid_range') max dataset maximum value (attribute 'valid_range') Returns:: None The data range is part of the so-called "st...
def getcompress(self): """Retrieves info about dataset compression type and mode. Args:: no argument Returns:: tuple holding: - compression type (one of the SDC.COMP_xxx constants) - optional values, depending on the compression type COM...
def setcompress(self, comp_type, value=0, v2=0): """Compresses the dataset using a specified compression method. Args:: comp_type compression type, identified by one of the SDC.COMP_xxx constants value,v2 auxiliary value(s) needed by some compression t...
def setexternalfile(self, filename, offset=0): """Store the dataset data in an external file. Args:: filename external file name offset offset in bytes where to start writing in the external file Returns:: None C library ...
def dimensions(self, full=0): """Return a dictionnary describing every dataset dimension. Args:: full true to get complete info about each dimension false to report only each dimension length Returns:: Dictionnary where each key is a dimension nam...
def info(self): """Return info about the dimension instance. Args:: no argument Returns:: 4-element tuple holding: - dimension name; 'fakeDimx' is returned if the dimension has not been named yet, where 'x' is the dimension index number ...
def setname(self, dim_name): """Set the dimension name. Args:: dim_name dimension name; setting 2 dimensions to the same name make the dimensions "shared"; in order to be shared, the dimesions must be deined similarly. Returns:: ...
def getscale(self): """Obtain the scale values along a dimension. Args:: no argument Returns:: list with the scale values; the list length is equal to the dimension length; the element type is equal to the dimension data type, as set when the 'setdimsc...
def setscale(self, data_type, scale): """Initialize the scale values along the dimension. Args:: data_type data type code (one of the SDC.xxx constants) scale sequence holding the scale values; the number of values must match the current length of t...
def getstrs(self): """Retrieve the dimension standard string attributes. Args:: no argument Returns:: 3-element tuple holding: -dimension label (attribute 'long_name') -dimension unit (attribute 'units') -dimension format (attribute ...
def setstrs(self, label, unit, format): """Set the dimension standard string attributes. Args:: label dimension label (attribute 'long_name') unit dimension unit (attribute 'units') format dimension format (attribute 'format') Returns:: None ...
def attach(self, num_name, write=0): """Locate an existing vdata or create a new vdata in the HDF file, returning a VD instance. Args:: num_name Name or reference number of the vdata. An existing vdata can be specified either through its reference number or ...