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rossi_2021

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transcription-factors

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14.5 GB

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4 contributors

History: 75 commits

Chase Mateusiak

addressing typos in readme

78ec915 about 1 month ago

genome_map
major reorganization and reprocessing. scripts added 10 months ago
genome_map_control
major reorganization and reprocessing. scripts added 10 months ago
scripts
updating scripts about 1 month ago
.gitattributes

2.46 kB
initial commit about 1 year ago
.gitignore

12 Bytes
addressing typos in readme about 1 month ago
README.md

31 kB
addressing typos in readme about 1 month ago
deprecated_rossi_2021_metadata.parquet

27.8 kB
xet

major reorganization and reprocessing. scripts added 10 months ago
genome_map_control_meta.parquet

1.11 kB
xet

major reorganization and reprocessing. scripts added 10 months ago
macs_bp500.parquet

22.1 MB
xet

updating peak calls such that no peak promoters are included with NA; adding readme to scripts/data where macs3 output is now stored about 1 month ago
macs_intergenic.parquet

21.7 MB
xet

updating peak calls such that no peak promoters are included with NA; adding readme to scripts/data where macs3 output is now stored about 1 month ago
macs_kang.parquet

24 MB
xet

updating peak calls such that no peak promoters are included with NA; adding readme to scripts/data where macs3 output is now stored about 1 month ago
macs_mindel.parquet

22.2 MB
xet

updating peak calls such that no peak promoters are included with NA; adding readme to scripts/data where macs3 output is now stored about 1 month ago
rossi_2021_af_combined.parquet

276 MB
xet

major reorganization and reprocessing. scripts added 10 months ago
rossi_2021_af_combined_mindel.parquet

1.36 GB
xet

adding mindel promoter data and updating readme 6 months ago
rossi_2021_af_intergenic_combined.parquet

249 MB
xet

adding additional promoter sets 5 months ago
rossi_2021_af_intergenic_replicates.parquet

375 MB
xet

adding additional promoter sets 5 months ago
rossi_2021_af_replicates.parquet

417 MB
xet

major reorganization and reprocessing. scripts added 10 months ago
rossi_2021_af_replicates_mindel.parquet

2.06 GB
xet

adding mindel promoter data and updating readme 6 months ago
rossi_2021_af_start_codon_500bp_combined.parquet

278 MB
xet

adding additional promoter sets 5 months ago
rossi_2021_af_start_codon_500bp_replicates.parquet

417 MB
xet

adding additional promoter sets 5 months ago
rossi_2021_metadata.parquet

33.6 kB
xet

adding mindel promoter data and updating readme 6 months ago
rossi_2021_metadata_sample.parquet

17 kB
xet

dedup cases where there is more than 1 antibody for a sample. added multi_antibody column to denote cases where this is true 9 months ago
yep_filtered_peaks.parquet

3.62 MB
xet

adding yep and macs peaks 4 months ago
yep_filtered_peaks_combined.parquet

528 kB
xet

re-doing chexmix peaks to annotate to nearest downstream orf 5 months ago