| --- |
| dataset_info: |
| features: |
| - name: qid |
| dtype: uint32 |
| - name: image |
| dtype: image |
| - name: question |
| dtype: string |
| - name: answer |
| dtype: string |
| - name: q_lang |
| dtype: |
| class_label: |
| names: |
| '0': en |
| '1': zh |
| - name: img_id |
| dtype: uint32 |
| - name: location |
| dtype: |
| class_label: |
| names: |
| '0': Abdomen |
| '1': Lung |
| '2': Chest_heart |
| '3': Chest_lung |
| '4': Brain_Tissue |
| '5': Brain_Face |
| '6': Brain |
| '7': Neck |
| '8': Chest_mediastinal |
| '9': Pelvic Cavity |
| - name: modality |
| dtype: |
| class_label: |
| names: |
| '0': MRI |
| '1': CT |
| '2': X-Ray |
| - name: base_type |
| dtype: |
| class_label: |
| names: |
| '0': vqa |
| '1': kvqa |
| - name: answer_type |
| dtype: |
| class_label: |
| names: |
| '0': OPEN |
| '1': CLOSED |
| - name: content_type |
| dtype: |
| class_label: |
| names: |
| '0': Modality |
| '1': Position |
| '2': Organ |
| '3': Size |
| '4': Abnormality |
| '5': Quantity |
| '6': Plane |
| '7': Shape |
| '8': Color |
| '9': KG |
| - name: triple |
| list: string |
| splits: |
| - name: test |
| num_bytes: 215442470 |
| num_examples: 2094 |
| - name: train |
| num_bytes: 1331237033 |
| num_examples: 9835 |
| - name: validation |
| num_bytes: 195808761 |
| num_examples: 2099 |
| download_size: 1324949790 |
| dataset_size: 1742488264 |
| configs: |
| - config_name: default |
| data_files: |
| - split: test |
| path: data/test-* |
| - split: train |
| path: data/train-* |
| - split: validation |
| path: data/validation-* |
| license: cc-by-4.0 |
| task_categories: |
| - visual-question-answering |
| language: |
| - en |
| - zh |
| tags: |
| - medical |
| --- |
| |
| Fork of [BoKelvin/SLAKE](https://huggingface.co/datasets/BoKelvin/SLAKE) converted to: |
|
|
| 1. Wrap images as binary object |
| 2. Classify categorical information into class labels |
|
|
| ## Metadata |
|
|
| | Name | #train | #val | #test | img#train | img#val | img#test | |
| | :---: | :----: | :---: | :---: | :-------: | :-----: | :------: | |
| | SLAKE | 9,835 | 2,099 | 2,094 | 586 | 174 | 180 | |
|
|
| ### Conversion script |
|
|
| ```py |
| from pathlib import Path |
| |
| from datasets import ClassLabel, Dataset, Features, Image, Sequence, Value |
| |
| SLAKE_FEAT = { |
| "qid": Value("uint32"), |
| "image": Image(decode=True), |
| "question": Value("string"), |
| "answer": Value("string"), |
| "q_lang": ClassLabel(names=["en", "zh"]), |
| "img_id": Value("uint32"), |
| "location": ClassLabel( |
| names=[ |
| "Abdomen", |
| "Lung", |
| "Chest_heart", |
| "Chest_lung", |
| "Brain_Tissue", |
| "Brain_Face", |
| "Brain", |
| "Neck", |
| "Chest_mediastinal", |
| "Pelvic Cavity", |
| ] |
| ), |
| "modality": ClassLabel(names=["MRI", "CT", "X-Ray"]), |
| "base_type": ClassLabel(names=["vqa", "kvqa"]), |
| "answer_type": ClassLabel(names=["OPEN", "CLOSED"]), |
| "content_type": ClassLabel( |
| names=[ |
| "Modality", |
| "Position", |
| "Organ", |
| "Size", |
| "Abnormality", |
| "Quantity", |
| "Plane", |
| "Shape", |
| "Color", |
| "KG", |
| ] |
| ), |
| "triple": Sequence(Value("string")), |
| } |
| |
| |
| def reformat( |
| jsonl_path: Path, |
| upload_to: str | None = None, |
| image_dir: str = "images", |
| ): |
| split = jsonl_path.stem |
| d = Dataset.from_json(jsonl_path.as_posix()) |
| d = d.map( |
| lambda e: { |
| "image": {"path": f"{image_dir}/{e['img_name']}"}, |
| }, |
| num_proc=16, |
| features=Features(SLAKE_FEAT), |
| remove_columns=["img_name"] |
| ) |
| |
| if upload_to: |
| d.push_to_hub(upload_to, split=split) |
| else: |
| print(d) |
| print(d[0]) |
| print(f"Would upload to split={split} on the hub.") |
| ``` |