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TCGA-BP-5196-01Z-00-DX1
Is there any evidence of vascular invasion noted in the slide?
Several patches in the image indicate vascular invasion, suggesting aggressive behavior.
TCGA-KIRC
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-RCC/TCGA-BP-5196-01Z-00-DX1.85bc950b-ed4a-4f77-8c17-b2916d0a05de_0_1024.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-RCC/TCGA-BP-5196-01Z-00-DX1.85bc950b-ed4a-4f77-8c17-b2916d0a05de_1_512.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-RCC/TCGA-BP-5196-01Z-00-DX1.85bc950b-ed4a-4f77-8c17-b2916d0a05de_1_1024.npy
TCGA-BP-5198-01Z-00-DX1
What is the predominant type of carcinoma observed in the slide?
The predominant type of carcinoma observed in the slide is clear cell renal carcinoma (ccRCC).
TCGA-KIRC
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-RCC/TCGA-BP-5198-01Z-00-DX1.3ff31173-5a84-4a07-92cf-2dec884f3c64_0_1024.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-RCC/TCGA-BP-5198-01Z-00-DX1.3ff31173-5a84-4a07-92cf-2dec884f3c64_1_512.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-RCC/TCGA-BP-5198-01Z-00-DX1.3ff31173-5a84-4a07-92cf-2dec884f3c64_1_1024.npy
TCGA-BP-5198-01Z-00-DX1
How are the tumor cells arranged in the image?
The tumor cells are arranged in nests and sheets, separated by delicate fibrovascular septa.
TCGA-KIRC
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-RCC/TCGA-BP-5198-01Z-00-DX1.3ff31173-5a84-4a07-92cf-2dec884f3c64_0_1024.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-RCC/TCGA-BP-5198-01Z-00-DX1.3ff31173-5a84-4a07-92cf-2dec884f3c64_1_512.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-RCC/TCGA-BP-5198-01Z-00-DX1.3ff31173-5a84-4a07-92cf-2dec884f3c64_1_1024.npy
TCGA-BP-5198-01Z-00-DX1
Describe the cytoplasm of the carcinoma cells.
The carcinoma cells have abundant clear cytoplasm.
TCGA-KIRC
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-RCC/TCGA-BP-5198-01Z-00-DX1.3ff31173-5a84-4a07-92cf-2dec884f3c64_0_1024.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-RCC/TCGA-BP-5198-01Z-00-DX1.3ff31173-5a84-4a07-92cf-2dec884f3c64_1_512.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-RCC/TCGA-BP-5198-01Z-00-DX1.3ff31173-5a84-4a07-92cf-2dec884f3c64_1_1024.npy
TCGA-BP-5198-01Z-00-DX1
What are the characteristics of the nuclei in the carcinoma cells?
The nuclei of the carcinoma cells are round to oval, with some showing mild pleomorphism and prominent nucleoli.
TCGA-KIRC
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-RCC/TCGA-BP-5198-01Z-00-DX1.3ff31173-5a84-4a07-92cf-2dec884f3c64_0_1024.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-RCC/TCGA-BP-5198-01Z-00-DX1.3ff31173-5a84-4a07-92cf-2dec884f3c64_1_512.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-RCC/TCGA-BP-5198-01Z-00-DX1.3ff31173-5a84-4a07-92cf-2dec884f3c64_1_1024.npy
TCGA-BP-5198-01Z-00-DX1
Is there any evidence of vascular invasion in the tumor?
Yes, there is evidence of vascular invasion, indicating a more aggressive behavior of the tumor.
TCGA-KIRC
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-RCC/TCGA-BP-5198-01Z-00-DX1.3ff31173-5a84-4a07-92cf-2dec884f3c64_0_1024.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-RCC/TCGA-BP-5198-01Z-00-DX1.3ff31173-5a84-4a07-92cf-2dec884f3c64_1_512.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-RCC/TCGA-BP-5198-01Z-00-DX1.3ff31173-5a84-4a07-92cf-2dec884f3c64_1_1024.npy
TCGA-BP-5198-01Z-00-DX1
What other pathological features are observed in the kidney tissue besides the carcinoma?
Other pathological features observed include areas of necrosis, tubular atrophy, interstitial fibrosis, sclerosis of glomeruli, arteriosclerosis, and arteriolar hyalinosis, suggesting chronic kidney damage.
TCGA-KIRC
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-RCC/TCGA-BP-5198-01Z-00-DX1.3ff31173-5a84-4a07-92cf-2dec884f3c64_0_1024.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-RCC/TCGA-BP-5198-01Z-00-DX1.3ff31173-5a84-4a07-92cf-2dec884f3c64_1_512.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-RCC/TCGA-BP-5198-01Z-00-DX1.3ff31173-5a84-4a07-92cf-2dec884f3c64_1_1024.npy
TCGA-BP-5198-01Z-00-DX1
Is there any tumor involvement observed in the renal capsule, perirenal adipose tissue, or renal vein?
No evidence of tumor involvement is observed in the renal capsule, perirenal adipose tissue, or renal vein in the provided patches.
TCGA-KIRC
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-RCC/TCGA-BP-5198-01Z-00-DX1.3ff31173-5a84-4a07-92cf-2dec884f3c64_0_1024.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-RCC/TCGA-BP-5198-01Z-00-DX1.3ff31173-5a84-4a07-92cf-2dec884f3c64_1_512.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-RCC/TCGA-BP-5198-01Z-00-DX1.3ff31173-5a84-4a07-92cf-2dec884f3c64_1_1024.npy
TCGA-BP-5199-01Z-00-DX1
What is the predominant type of carcinoma observed in the slide?
The predominant type of carcinoma observed in the image is clear cell renal cell carcinoma, characterized by nests and sheets of tumor cells with abundant clear cytoplasm and round to oval nuclei, often with prominent nucleoli.
TCGA-KIRC
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-RCC/TCGA-BP-5199-01Z-00-DX1.4db19cdf-ebe4-48ae-9e8f-331303f13472_0_1024.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-RCC/TCGA-BP-5199-01Z-00-DX1.4db19cdf-ebe4-48ae-9e8f-331303f13472_1_512.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-RCC/TCGA-BP-5199-01Z-00-DX1.4db19cdf-ebe4-48ae-9e8f-331303f13472_1_1024.npy
TCGA-BP-5199-01Z-00-DX1
What features in the image indicate aggressive behavior of the carcinoma?
The image shows signs of aggressive behavior of the carcinoma, including vascular invasion and areas of hemorrhage.
TCGA-KIRC
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-RCC/TCGA-BP-5199-01Z-00-DX1.4db19cdf-ebe4-48ae-9e8f-331303f13472_0_1024.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-RCC/TCGA-BP-5199-01Z-00-DX1.4db19cdf-ebe4-48ae-9e8f-331303f13472_1_512.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-RCC/TCGA-BP-5199-01Z-00-DX1.4db19cdf-ebe4-48ae-9e8f-331303f13472_1_1024.npy
TCGA-BP-5199-01Z-00-DX1
What histopathological features suggest the presence of sarcomatoid carcinoma?
The presence of spindle cell proliferation with nuclear atypia, increased mitotic activity, and necrosis in the image suggests sarcomatoid carcinoma.
TCGA-KIRC
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-RCC/TCGA-BP-5199-01Z-00-DX1.4db19cdf-ebe4-48ae-9e8f-331303f13472_0_1024.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-RCC/TCGA-BP-5199-01Z-00-DX1.4db19cdf-ebe4-48ae-9e8f-331303f13472_1_512.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-RCC/TCGA-BP-5199-01Z-00-DX1.4db19cdf-ebe4-48ae-9e8f-331303f13472_1_1024.npy
TCGA-BP-5199-01Z-00-DX1
What does the presence of spindle cells within a collagenous stroma indicate?
The presence of spindle cells within a collagenous stroma raises the differential diagnosis of sarcomatoid carcinoma or other spindle cell neoplasms.
TCGA-KIRC
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-RCC/TCGA-BP-5199-01Z-00-DX1.4db19cdf-ebe4-48ae-9e8f-331303f13472_0_1024.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-RCC/TCGA-BP-5199-01Z-00-DX1.4db19cdf-ebe4-48ae-9e8f-331303f13472_1_512.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-RCC/TCGA-BP-5199-01Z-00-DX1.4db19cdf-ebe4-48ae-9e8f-331303f13472_1_1024.npy
TCGA-BP-5199-01Z-00-DX1
What evidence is there of previous bleeding events in the tissue?
The image shows areas of extensive hemorrhage and hemosiderin deposition, indicating previous bleeding events.
TCGA-KIRC
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-RCC/TCGA-BP-5199-01Z-00-DX1.4db19cdf-ebe4-48ae-9e8f-331303f13472_0_1024.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-RCC/TCGA-BP-5199-01Z-00-DX1.4db19cdf-ebe4-48ae-9e8f-331303f13472_1_512.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-RCC/TCGA-BP-5199-01Z-00-DX1.4db19cdf-ebe4-48ae-9e8f-331303f13472_1_1024.npy
TCGA-BP-5199-01Z-00-DX1
What benign features are observed in the slide?
The slide shows benign cystic structures with hemorrhagic changes.
TCGA-KIRC
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-RCC/TCGA-BP-5199-01Z-00-DX1.4db19cdf-ebe4-48ae-9e8f-331303f13472_0_1024.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-RCC/TCGA-BP-5199-01Z-00-DX1.4db19cdf-ebe4-48ae-9e8f-331303f13472_1_512.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-RCC/TCGA-BP-5199-01Z-00-DX1.4db19cdf-ebe4-48ae-9e8f-331303f13472_1_1024.npy
TCGA-BP-5199-01Z-00-DX1
Is there any evidence of tumor involvement in the renal capsule, perirenal adipose tissue, or renal vein?
There is no evidence of tumor involvement in the renal capsule, perirenal adipose tissue, or renal vein in the image.
TCGA-KIRC
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-RCC/TCGA-BP-5199-01Z-00-DX1.4db19cdf-ebe4-48ae-9e8f-331303f13472_0_1024.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-RCC/TCGA-BP-5199-01Z-00-DX1.4db19cdf-ebe4-48ae-9e8f-331303f13472_1_512.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-RCC/TCGA-BP-5199-01Z-00-DX1.4db19cdf-ebe4-48ae-9e8f-331303f13472_1_1024.npy
TCGA-BP-5200-01Z-00-DX1
What are the most prominent chronic pathological features observed in the slide?
The most prominent chronic pathological features observed in the image include extensive fibrosis and hyalinization, characterized by dense collagen deposition and loss of normal renal architecture.
TCGA-KIRC
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-RCC/TCGA-BP-5200-01Z-00-DX1.857a5a60-4cbb-4aa1-ad71-2de6e7e1df30_0_1024.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-RCC/TCGA-BP-5200-01Z-00-DX1.857a5a60-4cbb-4aa1-ad71-2de6e7e1df30_1_512.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-RCC/TCGA-BP-5200-01Z-00-DX1.857a5a60-4cbb-4aa1-ad71-2de6e7e1df30_1_1024.npy
TCGA-BP-5200-01Z-00-DX1
What does the presence of necrosis and hemorrhage in the slide indicate?
The presence of necrosis with ghost-like cellular remnants and hemorrhage indicates significant renal injury, possibly ischemic or toxic in nature.
TCGA-KIRC
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-RCC/TCGA-BP-5200-01Z-00-DX1.857a5a60-4cbb-4aa1-ad71-2de6e7e1df30_0_1024.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-RCC/TCGA-BP-5200-01Z-00-DX1.857a5a60-4cbb-4aa1-ad71-2de6e7e1df30_1_512.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-RCC/TCGA-BP-5200-01Z-00-DX1.857a5a60-4cbb-4aa1-ad71-2de6e7e1df30_1_1024.npy
TCGA-BP-5200-01Z-00-DX1
What type of inflammatory infiltrates are observed in the slide?
Inflammatory infiltrates observed in the image are predominantly lymphocytes and plasma cells, indicating an ongoing immune response.
TCGA-KIRC
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-RCC/TCGA-BP-5200-01Z-00-DX1.857a5a60-4cbb-4aa1-ad71-2de6e7e1df30_0_1024.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-RCC/TCGA-BP-5200-01Z-00-DX1.857a5a60-4cbb-4aa1-ad71-2de6e7e1df30_1_512.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-RCC/TCGA-BP-5200-01Z-00-DX1.857a5a60-4cbb-4aa1-ad71-2de6e7e1df30_1_1024.npy
TCGA-BP-5200-01Z-00-DX1
What neoplastic process is suggested by the presence of clear cells in the slide?
The presence of clear cells with abundant cytoplasm arranged in nests and sheets, alongside a delicate vascular network, suggests a neoplastic process, potentially clear cell renal cell carcinoma (RCC).
TCGA-KIRC
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-RCC/TCGA-BP-5200-01Z-00-DX1.857a5a60-4cbb-4aa1-ad71-2de6e7e1df30_0_1024.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-RCC/TCGA-BP-5200-01Z-00-DX1.857a5a60-4cbb-4aa1-ad71-2de6e7e1df30_1_512.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-RCC/TCGA-BP-5200-01Z-00-DX1.857a5a60-4cbb-4aa1-ad71-2de6e7e1df30_1_1024.npy
TCGA-BP-5200-01Z-00-DX1
What benign features are observed in the slide?
Benign features observed in the image include benign vascular proliferations and spindle cell lesions, indicating possible reactive or benign neoplastic processes.
TCGA-KIRC
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-RCC/TCGA-BP-5200-01Z-00-DX1.857a5a60-4cbb-4aa1-ad71-2de6e7e1df30_0_1024.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-RCC/TCGA-BP-5200-01Z-00-DX1.857a5a60-4cbb-4aa1-ad71-2de6e7e1df30_1_512.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-RCC/TCGA-BP-5200-01Z-00-DX1.857a5a60-4cbb-4aa1-ad71-2de6e7e1df30_1_1024.npy
TCGA-BP-5201-01Z-00-DX1
What type of carcinoma is predominantly observed in the slide?
The slide shows clear cell renal carcinoma characterized by cells with clear cytoplasm and nuclear pleomorphism.
TCGA-KIRC
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-RCC/TCGA-BP-5201-01Z-00-DX1.d1a9878e-bb97-48fb-9098-9d9337f06250_0_1024.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-RCC/TCGA-BP-5201-01Z-00-DX1.d1a9878e-bb97-48fb-9098-9d9337f06250_1_512.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-RCC/TCGA-BP-5201-01Z-00-DX1.d1a9878e-bb97-48fb-9098-9d9337f06250_1_1024.npy
TCGA-BP-5201-01Z-00-DX1
What specific cellular arrangement is noted in the carcinoma?
The carcinoma cells are arranged in nests or acinar structures, often accompanied by a rich vascular network.
TCGA-KIRC
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-RCC/TCGA-BP-5201-01Z-00-DX1.d1a9878e-bb97-48fb-9098-9d9337f06250_0_1024.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-RCC/TCGA-BP-5201-01Z-00-DX1.d1a9878e-bb97-48fb-9098-9d9337f06250_1_512.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-RCC/TCGA-BP-5201-01Z-00-DX1.d1a9878e-bb97-48fb-9098-9d9337f06250_1_1024.npy
TCGA-BP-5201-01Z-00-DX1
What evidence of invasive behavior is seen in the carcinoma?
There is evidence of vascular invasion and stromal invasion in the carcinoma.
TCGA-KIRC
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-RCC/TCGA-BP-5201-01Z-00-DX1.d1a9878e-bb97-48fb-9098-9d9337f06250_0_1024.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-RCC/TCGA-BP-5201-01Z-00-DX1.d1a9878e-bb97-48fb-9098-9d9337f06250_1_512.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-RCC/TCGA-BP-5201-01Z-00-DX1.d1a9878e-bb97-48fb-9098-9d9337f06250_1_1024.npy
TCGA-BP-5201-01Z-00-DX1
What features suggest an aggressive neoplastic process in the slide?
The presence of vascular invasion, stromal invasion, and areas of hemorrhage and necrosis suggest an aggressive neoplastic process.
TCGA-KIRC
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-RCC/TCGA-BP-5201-01Z-00-DX1.d1a9878e-bb97-48fb-9098-9d9337f06250_0_1024.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-RCC/TCGA-BP-5201-01Z-00-DX1.d1a9878e-bb97-48fb-9098-9d9337f06250_1_512.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-RCC/TCGA-BP-5201-01Z-00-DX1.d1a9878e-bb97-48fb-9098-9d9337f06250_1_1024.npy
TCGA-BP-5201-01Z-00-DX1
What features are indicative of xanthogranulomatous pyelonephritis?
The presence of foamy macrophages is indicative of xanthogranulomatous pyelonephritis, a chronic inflammatory condition.
TCGA-KIRC
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-RCC/TCGA-BP-5201-01Z-00-DX1.d1a9878e-bb97-48fb-9098-9d9337f06250_0_1024.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-RCC/TCGA-BP-5201-01Z-00-DX1.d1a9878e-bb97-48fb-9098-9d9337f06250_1_512.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-RCC/TCGA-BP-5201-01Z-00-DX1.d1a9878e-bb97-48fb-9098-9d9337f06250_1_1024.npy
TCGA-BP-5201-01Z-00-DX1
What signs of chronic kidney damage are observed in the slide?
The slide shows significant fibrosis, tubular atrophy, and interstitial edema, suggesting chronic kidney damage.
TCGA-KIRC
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-RCC/TCGA-BP-5201-01Z-00-DX1.d1a9878e-bb97-48fb-9098-9d9337f06250_0_1024.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-RCC/TCGA-BP-5201-01Z-00-DX1.d1a9878e-bb97-48fb-9098-9d9337f06250_1_512.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-RCC/TCGA-BP-5201-01Z-00-DX1.d1a9878e-bb97-48fb-9098-9d9337f06250_1_1024.npy
TCGA-BP-5201-01Z-00-DX1
What other pathological processes are evident in the slide?
There are areas with necrosis and hemorrhage, possibly due to ischemic or traumatic injury, along with the presence of inflammatory cells and disrupted architecture.
TCGA-KIRC
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-RCC/TCGA-BP-5201-01Z-00-DX1.d1a9878e-bb97-48fb-9098-9d9337f06250_0_1024.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-RCC/TCGA-BP-5201-01Z-00-DX1.d1a9878e-bb97-48fb-9098-9d9337f06250_1_512.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-RCC/TCGA-BP-5201-01Z-00-DX1.d1a9878e-bb97-48fb-9098-9d9337f06250_1_1024.npy
TCGA-BP-5202-01Z-00-DX1
What type of carcinoma is observed in the slide?
The image shows clear cell renal carcinoma (ccRCC) with cells displaying clear cell features arranged in nests and acinar structures.
TCGA-KIRC
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-RCC/TCGA-BP-5202-01Z-00-DX1.d7e64bbb-d747-4a01-a5d6-26ad5a1e8a13_0_1024.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-RCC/TCGA-BP-5202-01Z-00-DX1.d7e64bbb-d747-4a01-a5d6-26ad5a1e8a13_1_512.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-RCC/TCGA-BP-5202-01Z-00-DX1.d7e64bbb-d747-4a01-a5d6-26ad5a1e8a13_1_1024.npy
TCGA-BP-5202-01Z-00-DX1
What evidence of vascular disruption is present in the slide?
The image shows extensive hemorrhage and edema across multiple sections, indicating significant vascular disruption.
TCGA-KIRC
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-RCC/TCGA-BP-5202-01Z-00-DX1.d7e64bbb-d747-4a01-a5d6-26ad5a1e8a13_0_1024.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-RCC/TCGA-BP-5202-01Z-00-DX1.d7e64bbb-d747-4a01-a5d6-26ad5a1e8a13_1_512.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-RCC/TCGA-BP-5202-01Z-00-DX1.d7e64bbb-d747-4a01-a5d6-26ad5a1e8a13_1_1024.npy
TCGA-BP-5202-01Z-00-DX1
What types of inflammatory cells are seen in the slide?
The image reveals inflammatory infiltrates primarily composed of lymphocytes and macrophages.
TCGA-KIRC
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-RCC/TCGA-BP-5202-01Z-00-DX1.d7e64bbb-d747-4a01-a5d6-26ad5a1e8a13_0_1024.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-RCC/TCGA-BP-5202-01Z-00-DX1.d7e64bbb-d747-4a01-a5d6-26ad5a1e8a13_1_512.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-RCC/TCGA-BP-5202-01Z-00-DX1.d7e64bbb-d747-4a01-a5d6-26ad5a1e8a13_1_1024.npy
TCGA-BP-5202-01Z-00-DX1
What are the characteristics of necrosis observed in the slide?
The necrosis is characterized by loss of cellular detail, indicating cell death likely due to ischemia or trauma.
TCGA-KIRC
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-RCC/TCGA-BP-5202-01Z-00-DX1.d7e64bbb-d747-4a01-a5d6-26ad5a1e8a13_0_1024.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-RCC/TCGA-BP-5202-01Z-00-DX1.d7e64bbb-d747-4a01-a5d6-26ad5a1e8a13_1_512.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-RCC/TCGA-BP-5202-01Z-00-DX1.d7e64bbb-d747-4a01-a5d6-26ad5a1e8a13_1_1024.npy
TCGA-BP-5202-01Z-00-DX1
What features indicate chronic renal injury in the slide?
The image shows interstitial fibrosis and tubular atrophy in some patches, suggesting chronic injury.
TCGA-KIRC
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-RCC/TCGA-BP-5202-01Z-00-DX1.d7e64bbb-d747-4a01-a5d6-26ad5a1e8a13_0_1024.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-RCC/TCGA-BP-5202-01Z-00-DX1.d7e64bbb-d747-4a01-a5d6-26ad5a1e8a13_1_512.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-RCC/TCGA-BP-5202-01Z-00-DX1.d7e64bbb-d747-4a01-a5d6-26ad5a1e8a13_1_1024.npy
TCGA-BP-5202-01Z-00-DX1
What evidence of tumor invasion is present in the slide?
The image shows evidence of vascular invasion by tumor cells.
TCGA-KIRC
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-RCC/TCGA-BP-5202-01Z-00-DX1.d7e64bbb-d747-4a01-a5d6-26ad5a1e8a13_0_1024.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-RCC/TCGA-BP-5202-01Z-00-DX1.d7e64bbb-d747-4a01-a5d6-26ad5a1e8a13_1_512.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-RCC/TCGA-BP-5202-01Z-00-DX1.d7e64bbb-d747-4a01-a5d6-26ad5a1e8a13_1_1024.npy
TCGA-BP-5202-01Z-00-DX1
What normal structures are disrupted in regions affected by hemorrhage and necrosis?
The image shows areas of normal renal architecture with glomeruli and tubules, which are disrupted in regions affected by hemorrhage and necrosis.
TCGA-KIRC
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-RCC/TCGA-BP-5202-01Z-00-DX1.d7e64bbb-d747-4a01-a5d6-26ad5a1e8a13_0_1024.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-RCC/TCGA-BP-5202-01Z-00-DX1.d7e64bbb-d747-4a01-a5d6-26ad5a1e8a13_1_512.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-RCC/TCGA-BP-5202-01Z-00-DX1.d7e64bbb-d747-4a01-a5d6-26ad5a1e8a13_1_1024.npy
TCGA-BR-6452-01Z-00-DX1
What type of carcinoma is predominantly observed in the slide?
Gastric adenocarcinoma is predominantly observed in the slide.
TCGA-STAD
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6452-01Z-00-DX1.aec8246e-9dce-436d-9faa-df8fa1f6e47c_0_1024.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6452-01Z-00-DX1.aec8246e-9dce-436d-9faa-df8fa1f6e47c_1_512.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6452-01Z-00-DX1.aec8246e-9dce-436d-9faa-df8fa1f6e47c_1_1024.npy
TCGA-BR-6452-01Z-00-DX1
What are the key histological features of the gastric adenocarcinoma observed in the image?
The key histological features of the gastric adenocarcinoma include irregular glandular structures, significant nuclear atypia, and desmoplastic stromal reactions.
TCGA-STAD
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6452-01Z-00-DX1.aec8246e-9dce-436d-9faa-df8fa1f6e47c_0_1024.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6452-01Z-00-DX1.aec8246e-9dce-436d-9faa-df8fa1f6e47c_1_512.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6452-01Z-00-DX1.aec8246e-9dce-436d-9faa-df8fa1f6e47c_1_1024.npy
TCGA-BR-6452-01Z-00-DX1
What evidence of poorly differentiated carcinoma is present in the image?
The image shows poorly differentiated carcinoma with marked pleomorphism and high mitotic activity.
TCGA-STAD
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6452-01Z-00-DX1.aec8246e-9dce-436d-9faa-df8fa1f6e47c_0_1024.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6452-01Z-00-DX1.aec8246e-9dce-436d-9faa-df8fa1f6e47c_1_512.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6452-01Z-00-DX1.aec8246e-9dce-436d-9faa-df8fa1f6e47c_1_1024.npy
TCGA-BR-6452-01Z-00-DX1
What inflammatory changes are observed in the image?
Chronic inflammation is observed, with dense infiltration of lymphocytes, plasma cells, and occasional neutrophils within the lamina propria and stroma.
TCGA-STAD
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6452-01Z-00-DX1.aec8246e-9dce-436d-9faa-df8fa1f6e47c_0_1024.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6452-01Z-00-DX1.aec8246e-9dce-436d-9faa-df8fa1f6e47c_1_512.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6452-01Z-00-DX1.aec8246e-9dce-436d-9faa-df8fa1f6e47c_1_1024.npy
TCGA-BR-6452-01Z-00-DX1
Is there any evidence of vascular tumor embolism in the image?
No, there is no evidence of vascular tumor embolism in the examined sections.
TCGA-STAD
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6452-01Z-00-DX1.aec8246e-9dce-436d-9faa-df8fa1f6e47c_0_1024.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6452-01Z-00-DX1.aec8246e-9dce-436d-9faa-df8fa1f6e47c_1_512.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6452-01Z-00-DX1.aec8246e-9dce-436d-9faa-df8fa1f6e47c_1_1024.npy
TCGA-BR-6452-01Z-00-DX1
Is there any ulceration associated with the neoplastic and inflammatory features in the image?
No, there is no associated ulceration observed in the examined sections.
TCGA-STAD
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6452-01Z-00-DX1.aec8246e-9dce-436d-9faa-df8fa1f6e47c_0_1024.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6452-01Z-00-DX1.aec8246e-9dce-436d-9faa-df8fa1f6e47c_1_512.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6452-01Z-00-DX1.aec8246e-9dce-436d-9faa-df8fa1f6e47c_1_1024.npy
TCGA-BR-6453-01Z-00-DX1
What types of inflammatory cells are observed in the image?
The image shows dense infiltrates of lymphocytes, plasma cells, eosinophils, and neutrophils.
TCGA-STAD
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6453-01Z-00-DX1.2e52d64c-e34f-47a9-9e5e-8954b5ef18ca_0_1024.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6453-01Z-00-DX1.2e52d64c-e34f-47a9-9e5e-8954b5ef18ca_1_512.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6453-01Z-00-DX1.2e52d64c-e34f-47a9-9e5e-8954b5ef18ca_1_1024.npy
TCGA-BR-6453-01Z-00-DX1
What type of carcinoma is predominantly observed in the slide?
The slide predominantly shows features of poorly differentiated carcinoma, including signet ring cell carcinoma.
TCGA-STAD
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6453-01Z-00-DX1.2e52d64c-e34f-47a9-9e5e-8954b5ef18ca_0_1024.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6453-01Z-00-DX1.2e52d64c-e34f-47a9-9e5e-8954b5ef18ca_1_512.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6453-01Z-00-DX1.2e52d64c-e34f-47a9-9e5e-8954b5ef18ca_1_1024.npy
TCGA-BR-6453-01Z-00-DX1
What are the key morphological features of the signet ring cell carcinoma observed in the image?
The signet ring cell carcinoma is characterized by the presence of signet ring cells with prominent cytoplasmic vacuoles and high nuclear-to-cytoplasmic ratios.
TCGA-STAD
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6453-01Z-00-DX1.2e52d64c-e34f-47a9-9e5e-8954b5ef18ca_0_1024.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6453-01Z-00-DX1.2e52d64c-e34f-47a9-9e5e-8954b5ef18ca_1_512.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6453-01Z-00-DX1.2e52d64c-e34f-47a9-9e5e-8954b5ef18ca_1_1024.npy
TCGA-BR-6453-01Z-00-DX1
What is the pattern of invasion by the neoplastic cells in the tissue?
The neoplastic cells are diffusely infiltrating the lamina propria and submucosa with evidence of desmoplastic stromal reactions and glandular destruction, indicating an aggressive invasive pattern.
TCGA-STAD
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6453-01Z-00-DX1.2e52d64c-e34f-47a9-9e5e-8954b5ef18ca_0_1024.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6453-01Z-00-DX1.2e52d64c-e34f-47a9-9e5e-8954b5ef18ca_1_512.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6453-01Z-00-DX1.2e52d64c-e34f-47a9-9e5e-8954b5ef18ca_1_1024.npy
TCGA-BR-6453-01Z-00-DX1
What additional pathological features are observed in the tissue architecture?
The tissue architecture is further complicated by areas of necrosis, hemorrhage, and fibrosis.
TCGA-STAD
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6453-01Z-00-DX1.2e52d64c-e34f-47a9-9e5e-8954b5ef18ca_0_1024.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6453-01Z-00-DX1.2e52d64c-e34f-47a9-9e5e-8954b5ef18ca_1_512.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6453-01Z-00-DX1.2e52d64c-e34f-47a9-9e5e-8954b5ef18ca_1_1024.npy
TCGA-BR-6453-01Z-00-DX1
What does the presence of tumor cells on the serosal surface indicate?
The presence of tumor cells on the serosal surface raises the possibility of metastatic involvement.
TCGA-STAD
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6453-01Z-00-DX1.2e52d64c-e34f-47a9-9e5e-8954b5ef18ca_0_1024.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6453-01Z-00-DX1.2e52d64c-e34f-47a9-9e5e-8954b5ef18ca_1_512.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6453-01Z-00-DX1.2e52d64c-e34f-47a9-9e5e-8954b5ef18ca_1_1024.npy
TCGA-BR-6453-01Z-00-DX1
Is there any evidence of vascular tumor embolism in the image?
No vascular tumor embolism is observed in the provided sections.
TCGA-STAD
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6453-01Z-00-DX1.2e52d64c-e34f-47a9-9e5e-8954b5ef18ca_0_1024.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6453-01Z-00-DX1.2e52d64c-e34f-47a9-9e5e-8954b5ef18ca_1_512.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6453-01Z-00-DX1.2e52d64c-e34f-47a9-9e5e-8954b5ef18ca_1_1024.npy
TCGA-BR-6453-01Z-00-DX1
Is there any ulceration observed in the image?
No associated ulcer is observed in the provided sections.
TCGA-STAD
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6453-01Z-00-DX1.2e52d64c-e34f-47a9-9e5e-8954b5ef18ca_0_1024.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6453-01Z-00-DX1.2e52d64c-e34f-47a9-9e5e-8954b5ef18ca_1_512.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6453-01Z-00-DX1.2e52d64c-e34f-47a9-9e5e-8954b5ef18ca_1_1024.npy
TCGA-BR-6454-01Z-00-DX1
What is the predominant type of carcinoma observed in the slide?
The predominant type of carcinoma observed in the slide is intestinal-type adenocarcinoma in the gastric cardia region.
TCGA-STAD
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6454-01Z-00-DX1.63fb6280-2b43-49b2-960a-eb9c0e8b617c_0_1024.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6454-01Z-00-DX1.63fb6280-2b43-49b2-960a-eb9c0e8b617c_1_512.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6454-01Z-00-DX1.63fb6280-2b43-49b2-960a-eb9c0e8b617c_1_1024.npy
TCGA-BR-6454-01Z-00-DX1
What glandular structures are seen in the slide?
The slide shows glandular structures with irregular shapes and sizes, lined by columnar epithelial cells.
TCGA-STAD
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6454-01Z-00-DX1.63fb6280-2b43-49b2-960a-eb9c0e8b617c_0_1024.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6454-01Z-00-DX1.63fb6280-2b43-49b2-960a-eb9c0e8b617c_1_512.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6454-01Z-00-DX1.63fb6280-2b43-49b2-960a-eb9c0e8b617c_1_1024.npy
TCGA-BR-6454-01Z-00-DX1
What are the nuclear characteristics of the epithelial cells in the slide?
The epithelial cells exhibit nuclear atypia, hyperchromasia, and prominent nucleoli.
TCGA-STAD
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6454-01Z-00-DX1.63fb6280-2b43-49b2-960a-eb9c0e8b617c_0_1024.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6454-01Z-00-DX1.63fb6280-2b43-49b2-960a-eb9c0e8b617c_1_512.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6454-01Z-00-DX1.63fb6280-2b43-49b2-960a-eb9c0e8b617c_1_1024.npy
TCGA-BR-6454-01Z-00-DX1
What evidence of cellular activity is present in the slide?
There is increased mitotic activity observed in the slide.
TCGA-STAD
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6454-01Z-00-DX1.63fb6280-2b43-49b2-960a-eb9c0e8b617c_0_1024.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6454-01Z-00-DX1.63fb6280-2b43-49b2-960a-eb9c0e8b617c_1_512.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6454-01Z-00-DX1.63fb6280-2b43-49b2-960a-eb9c0e8b617c_1_1024.npy
TCGA-BR-6454-01Z-00-DX1
What stromal reactions are observed in the slide?
Desmoplastic stromal reactions are observed, suggesting an invasive neoplastic process.
TCGA-STAD
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6454-01Z-00-DX1.63fb6280-2b43-49b2-960a-eb9c0e8b617c_0_1024.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6454-01Z-00-DX1.63fb6280-2b43-49b2-960a-eb9c0e8b617c_1_512.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6454-01Z-00-DX1.63fb6280-2b43-49b2-960a-eb9c0e8b617c_1_1024.npy
TCGA-BR-6454-01Z-00-DX1
What features characterize the intestinal-type adenoma observed in the slide?
The intestinal-type adenoma is characterized by nuclear stratification and hyperchromasia, with potential for malignant transformation.
TCGA-STAD
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6454-01Z-00-DX1.63fb6280-2b43-49b2-960a-eb9c0e8b617c_0_1024.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6454-01Z-00-DX1.63fb6280-2b43-49b2-960a-eb9c0e8b617c_1_512.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6454-01Z-00-DX1.63fb6280-2b43-49b2-960a-eb9c0e8b617c_1_1024.npy
TCGA-BR-6454-01Z-00-DX1
What type of inflammatory infiltrates are present in the slide?
There are lymphocytic and plasma cell infiltrates indicating chronic inflammation.
TCGA-STAD
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6454-01Z-00-DX1.63fb6280-2b43-49b2-960a-eb9c0e8b617c_0_1024.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6454-01Z-00-DX1.63fb6280-2b43-49b2-960a-eb9c0e8b617c_1_512.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6454-01Z-00-DX1.63fb6280-2b43-49b2-960a-eb9c0e8b617c_1_1024.npy
TCGA-BR-6455-01Z-00-DX1
What is the predominant type of carcinoma observed in the slide?
The image shows poorly differentiated gastric carcinoma.
TCGA-STAD
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6455-01Z-00-DX1.402682fe-98b4-4381-85da-98510db17af9_0_1024.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6455-01Z-00-DX1.402682fe-98b4-4381-85da-98510db17af9_1_512.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6455-01Z-00-DX1.402682fe-98b4-4381-85da-98510db17af9_1_1024.npy
TCGA-BR-6455-01Z-00-DX1
What are the key morphological features of the tumor cells in the slide?
The tumor cells exhibit high nuclear-to-cytoplasmic ratios, prominent nucleoli, and significant nuclear pleomorphism. They are arranged in sheets and nests and show aggressive features such as high mitotic activity and desmoplastic stromal reactions.
TCGA-STAD
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6455-01Z-00-DX1.402682fe-98b4-4381-85da-98510db17af9_0_1024.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6455-01Z-00-DX1.402682fe-98b4-4381-85da-98510db17af9_1_512.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6455-01Z-00-DX1.402682fe-98b4-4381-85da-98510db17af9_1_1024.npy
TCGA-BR-6455-01Z-00-DX1
What type of stromal reaction is observed in association with the tumor?
The image shows desmoplastic stromal reactions associated with the tumor.
TCGA-STAD
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6455-01Z-00-DX1.402682fe-98b4-4381-85da-98510db17af9_0_1024.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6455-01Z-00-DX1.402682fe-98b4-4381-85da-98510db17af9_1_512.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6455-01Z-00-DX1.402682fe-98b4-4381-85da-98510db17af9_1_1024.npy
TCGA-BR-6455-01Z-00-DX1
What evidence of immune response is present in the slide?
There is lymphocytic infiltration around the tumor cells, suggesting an immune response.
TCGA-STAD
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6455-01Z-00-DX1.402682fe-98b4-4381-85da-98510db17af9_0_1024.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6455-01Z-00-DX1.402682fe-98b4-4381-85da-98510db17af9_1_512.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6455-01Z-00-DX1.402682fe-98b4-4381-85da-98510db17af9_1_1024.npy
TCGA-BR-6455-01Z-00-DX1
What types of inflammatory infiltrates are seen in the slide?
The slide shows dense infiltrates of lymphocytes, plasma cells, and eosinophils within the lamina propria and stroma, indicative of chronic inflammation, as well as neutrophilic infiltration and edema, indicative of acute inflammation.
TCGA-STAD
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6455-01Z-00-DX1.402682fe-98b4-4381-85da-98510db17af9_0_1024.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6455-01Z-00-DX1.402682fe-98b4-4381-85da-98510db17af9_1_512.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6455-01Z-00-DX1.402682fe-98b4-4381-85da-98510db17af9_1_1024.npy
TCGA-BR-6455-01Z-00-DX1
What layers of the gastric tissue are infiltrated by the tumor cells?
The tumor cells infiltrate into the submucosa and muscularis propria.
TCGA-STAD
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6455-01Z-00-DX1.402682fe-98b4-4381-85da-98510db17af9_0_1024.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6455-01Z-00-DX1.402682fe-98b4-4381-85da-98510db17af9_1_512.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6455-01Z-00-DX1.402682fe-98b4-4381-85da-98510db17af9_1_1024.npy
TCGA-BR-6455-01Z-00-DX1
Is there any evidence of vascular tumor embolism in the slide?
There is no evidence of vascular tumor embolism in the examined sections of the image.
TCGA-STAD
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6455-01Z-00-DX1.402682fe-98b4-4381-85da-98510db17af9_0_1024.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6455-01Z-00-DX1.402682fe-98b4-4381-85da-98510db17af9_1_512.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6455-01Z-00-DX1.402682fe-98b4-4381-85da-98510db17af9_1_1024.npy
TCGA-BR-6455-01Z-00-DX1
Are there any signs of ulceration observed in the slide?
There is no evidence of ulceration in the examined sections of the image.
TCGA-STAD
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6455-01Z-00-DX1.402682fe-98b4-4381-85da-98510db17af9_0_1024.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6455-01Z-00-DX1.402682fe-98b4-4381-85da-98510db17af9_1_512.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6455-01Z-00-DX1.402682fe-98b4-4381-85da-98510db17af9_1_1024.npy
TCGA-BR-6456-01Z-00-DX1
What is the predominant type of carcinoma observed in the slide?
The image shows features consistent with gastric adenocarcinoma.
TCGA-STAD
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6456-01Z-00-DX1.2cb7b656-95e1-4f34-99e6-77a051fb79e5_0_1024.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6456-01Z-00-DX1.2cb7b656-95e1-4f34-99e6-77a051fb79e5_1_512.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6456-01Z-00-DX1.2cb7b656-95e1-4f34-99e6-77a051fb79e5_1_1024.npy
TCGA-BR-6456-01Z-00-DX1
What are the key histological features of the tumor cells observed in the slide?
The tumor cells in the image display significant nuclear atypia, hyperchromasia, and increased mitotic activity.
TCGA-STAD
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6456-01Z-00-DX1.2cb7b656-95e1-4f34-99e6-77a051fb79e5_0_1024.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6456-01Z-00-DX1.2cb7b656-95e1-4f34-99e6-77a051fb79e5_1_512.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6456-01Z-00-DX1.2cb7b656-95e1-4f34-99e6-77a051fb79e5_1_1024.npy
TCGA-BR-6456-01Z-00-DX1
What evidence of aggressive behavior is noted in the tumor?
The image shows evidence of lymphovascular invasion and desmoplastic stromal reaction, indicating aggressive behavior.
TCGA-STAD
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6456-01Z-00-DX1.2cb7b656-95e1-4f34-99e6-77a051fb79e5_0_1024.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6456-01Z-00-DX1.2cb7b656-95e1-4f34-99e6-77a051fb79e5_1_512.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6456-01Z-00-DX1.2cb7b656-95e1-4f34-99e6-77a051fb79e5_1_1024.npy
TCGA-BR-6456-01Z-00-DX1
What feature in the slide suggests high-grade malignancy of the tumor?
The presence of necrosis within some tumor masses in the image suggests high-grade malignancy.
TCGA-STAD
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6456-01Z-00-DX1.2cb7b656-95e1-4f34-99e6-77a051fb79e5_0_1024.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6456-01Z-00-DX1.2cb7b656-95e1-4f34-99e6-77a051fb79e5_1_512.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6456-01Z-00-DX1.2cb7b656-95e1-4f34-99e6-77a051fb79e5_1_1024.npy
TCGA-BR-6456-01Z-00-DX1
What chronic inflammatory changes are observed in the slide?
The image shows chronic inflammatory changes with dense lymphoid infiltrates and fibrosis.
TCGA-STAD
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6456-01Z-00-DX1.2cb7b656-95e1-4f34-99e6-77a051fb79e5_0_1024.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6456-01Z-00-DX1.2cb7b656-95e1-4f34-99e6-77a051fb79e5_1_512.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6456-01Z-00-DX1.2cb7b656-95e1-4f34-99e6-77a051fb79e5_1_1024.npy
TCGA-BR-6456-01Z-00-DX1
What normal histological structures are observed in the slide?
The image shows normal histology such as well-organized smooth muscle fibers in the muscularis propria and mature adipocytes indicative of benign lipomatous changes.
TCGA-STAD
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6456-01Z-00-DX1.2cb7b656-95e1-4f34-99e6-77a051fb79e5_0_1024.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6456-01Z-00-DX1.2cb7b656-95e1-4f34-99e6-77a051fb79e5_1_512.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6456-01Z-00-DX1.2cb7b656-95e1-4f34-99e6-77a051fb79e5_1_1024.npy
TCGA-BR-6457-01Z-00-DX1
What normal structures are observed in the gastric tissue slide?
The image shows well-organized muscularis propria and mature adipose tissue without signs of atypia or malignancy.
TCGA-STAD
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6457-01Z-00-DX1.387f0968-fcec-4864-86f8-9c87f658c371_0_1024.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6457-01Z-00-DX1.387f0968-fcec-4864-86f8-9c87f658c371_1_512.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6457-01Z-00-DX1.387f0968-fcec-4864-86f8-9c87f658c371_1_1024.npy
TCGA-BR-6457-01Z-00-DX1
What inflammatory processes are identified in the slide?
The slide demonstrates chronic and acute inflammatory processes characterized by dense lymphoplasmacytic and neutrophilic infiltrates, fibrosis, and glandular disorganization.
TCGA-STAD
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6457-01Z-00-DX1.387f0968-fcec-4864-86f8-9c87f658c371_0_1024.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6457-01Z-00-DX1.387f0968-fcec-4864-86f8-9c87f658c371_1_512.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6457-01Z-00-DX1.387f0968-fcec-4864-86f8-9c87f658c371_1_1024.npy
TCGA-BR-6457-01Z-00-DX1
What evidence of chronic gastritis is present in the slide?
The image reveals evidence of chronic gastritis, including dense inflammatory infiltrates and some areas showing possible ulceration or erosion.
TCGA-STAD
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6457-01Z-00-DX1.387f0968-fcec-4864-86f8-9c87f658c371_0_1024.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6457-01Z-00-DX1.387f0968-fcec-4864-86f8-9c87f658c371_1_512.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6457-01Z-00-DX1.387f0968-fcec-4864-86f8-9c87f658c371_1_1024.npy
TCGA-BR-6457-01Z-00-DX1
What type of carcinoma is suggested by the histopathological features observed?
The image suggests an invasive adenocarcinoma, likely of the intestinal type, characterized by irregular glandular structures, nuclear atypia, desmoplastic stromal reaction, and areas of necrosis.
TCGA-STAD
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6457-01Z-00-DX1.387f0968-fcec-4864-86f8-9c87f658c371_0_1024.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6457-01Z-00-DX1.387f0968-fcec-4864-86f8-9c87f658c371_1_512.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6457-01Z-00-DX1.387f0968-fcec-4864-86f8-9c87f658c371_1_1024.npy
TCGA-BR-6457-01Z-00-DX1
What specific features indicate the presence of adenocarcinoma in the slide?
The presence of irregular glandular structures, nuclear atypia, desmoplastic stromal reaction, and areas of necrosis indicate adenocarcinoma in the image.
TCGA-STAD
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6457-01Z-00-DX1.387f0968-fcec-4864-86f8-9c87f658c371_0_1024.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6457-01Z-00-DX1.387f0968-fcec-4864-86f8-9c87f658c371_1_512.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6457-01Z-00-DX1.387f0968-fcec-4864-86f8-9c87f658c371_1_1024.npy
TCGA-BR-6457-01Z-00-DX1
Is there any evidence of vascular tumor embolism in the slide?
No vascular tumor embolism is definitively identified in the image.
TCGA-STAD
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6457-01Z-00-DX1.387f0968-fcec-4864-86f8-9c87f658c371_0_1024.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6457-01Z-00-DX1.387f0968-fcec-4864-86f8-9c87f658c371_1_512.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6457-01Z-00-DX1.387f0968-fcec-4864-86f8-9c87f658c371_1_1024.npy
TCGA-BR-6458-01Z-00-DX1
What is the predominant type of carcinoma observed in the slide?
The slide from the gastric tissue shows poorly differentiated adenocarcinoma.
TCGA-STAD
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6458-01Z-00-DX1.e889b058-99ab-4337-84a5-60a884caad55_0_1024.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6458-01Z-00-DX1.e889b058-99ab-4337-84a5-60a884caad55_1_512.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6458-01Z-00-DX1.e889b058-99ab-4337-84a5-60a884caad55_1_1024.npy
TCGA-BR-6458-01Z-00-DX1
What are the key histological features of the poorly differentiated adenocarcinoma seen in the image?
The poorly differentiated adenocarcinoma is characterized by irregular glandular structures, marked nuclear pleomorphism, hyperchromatic nuclei, and high mitotic activity.
TCGA-STAD
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6458-01Z-00-DX1.e889b058-99ab-4337-84a5-60a884caad55_0_1024.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6458-01Z-00-DX1.e889b058-99ab-4337-84a5-60a884caad55_1_512.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6458-01Z-00-DX1.e889b058-99ab-4337-84a5-60a884caad55_1_1024.npy
TCGA-BR-6458-01Z-00-DX1
What evidence of invasive behavior is observed in the carcinoma?
The carcinoma exhibits invasive behavior by infiltrating into deeper layers such as the muscularis propria and subserosal regions, with evidence of desmoplastic stromal reactions.
TCGA-STAD
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6458-01Z-00-DX1.e889b058-99ab-4337-84a5-60a884caad55_0_1024.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6458-01Z-00-DX1.e889b058-99ab-4337-84a5-60a884caad55_1_512.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6458-01Z-00-DX1.e889b058-99ab-4337-84a5-60a884caad55_1_1024.npy
TCGA-BR-6458-01Z-00-DX1
What additional features suggest aggressive tumor activity?
The presence of areas of necrosis and hemorrhage indicates aggressive tumor activity.
TCGA-STAD
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6458-01Z-00-DX1.e889b058-99ab-4337-84a5-60a884caad55_0_1024.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6458-01Z-00-DX1.e889b058-99ab-4337-84a5-60a884caad55_1_512.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6458-01Z-00-DX1.e889b058-99ab-4337-84a5-60a884caad55_1_1024.npy
TCGA-BR-6458-01Z-00-DX1
What histological variants or differential diagnoses are suggested by the presence of clear cell carcinoma features and spindle-shaped cells?
The presence of clear cell carcinoma features and spindle-shaped cells suggests possible histological variants or differential diagnoses, including metastatic lesions.
TCGA-STAD
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6458-01Z-00-DX1.e889b058-99ab-4337-84a5-60a884caad55_0_1024.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6458-01Z-00-DX1.e889b058-99ab-4337-84a5-60a884caad55_1_512.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6458-01Z-00-DX1.e889b058-99ab-4337-84a5-60a884caad55_1_1024.npy
TCGA-BR-6458-01Z-00-DX1
What type of inflammatory changes are noted in the image?
The image shows inflammatory changes with dense infiltrates of lymphocytes, plasma cells, and neutrophils, indicative of chronic and acute gastritis.
TCGA-STAD
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6458-01Z-00-DX1.e889b058-99ab-4337-84a5-60a884caad55_0_1024.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6458-01Z-00-DX1.e889b058-99ab-4337-84a5-60a884caad55_1_512.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6458-01Z-00-DX1.e889b058-99ab-4337-84a5-60a884caad55_1_1024.npy
TCGA-BR-6458-01Z-00-DX1
Is there any evidence of vascular tumor embolism or associated ulceration in the slide?
The slide lacks evidence of vascular tumor embolism or associated ulceration.
TCGA-STAD
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6458-01Z-00-DX1.e889b058-99ab-4337-84a5-60a884caad55_0_1024.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6458-01Z-00-DX1.e889b058-99ab-4337-84a5-60a884caad55_1_512.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6458-01Z-00-DX1.e889b058-99ab-4337-84a5-60a884caad55_1_1024.npy
TCGA-BR-6563-01Z-00-DX1
What type of carcinoma is predominantly observed in the slide?
The image shows the presence of signet ring cell carcinoma, characterized by signet ring cells with cytoplasmic vacuoles and desmoplastic stromal response, indicating an aggressive adenocarcinoma subtype in the gastric antrum.
TCGA-STAD
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6563-01Z-00-DX1.2398c0e0-47a6-4557-8e2d-3b890756900a_0_1024.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6563-01Z-00-DX1.2398c0e0-47a6-4557-8e2d-3b890756900a_1_512.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6563-01Z-00-DX1.2398c0e0-47a6-4557-8e2d-3b890756900a_1_1024.npy
TCGA-BR-6563-01Z-00-DX1
What morphological features characterize the signet ring cell carcinoma observed in the image?
The signet ring cell carcinoma is characterized by signet ring cells with cytoplasmic vacuoles and a desmoplastic stromal response.
TCGA-STAD
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6563-01Z-00-DX1.2398c0e0-47a6-4557-8e2d-3b890756900a_0_1024.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6563-01Z-00-DX1.2398c0e0-47a6-4557-8e2d-3b890756900a_1_512.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6563-01Z-00-DX1.2398c0e0-47a6-4557-8e2d-3b890756900a_1_1024.npy
TCGA-BR-6563-01Z-00-DX1
What features indicate the presence of poorly cohesive carcinoma in the image?
The image shows poorly cohesive carcinoma with diffuse infiltration of atypical cells, high-grade malignancy features, and disrupted glandular architecture.
TCGA-STAD
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6563-01Z-00-DX1.2398c0e0-47a6-4557-8e2d-3b890756900a_0_1024.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6563-01Z-00-DX1.2398c0e0-47a6-4557-8e2d-3b890756900a_1_512.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6563-01Z-00-DX1.2398c0e0-47a6-4557-8e2d-3b890756900a_1_1024.npy
TCGA-BR-6563-01Z-00-DX1
What signs of chronic inflammation are noted in the image?
The image reveals dense lymphoplasmacytic infiltrates and signs of chronic gastritis, including glandular atrophy and reactive epithelial changes.
TCGA-STAD
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6563-01Z-00-DX1.2398c0e0-47a6-4557-8e2d-3b890756900a_0_1024.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6563-01Z-00-DX1.2398c0e0-47a6-4557-8e2d-3b890756900a_1_512.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6563-01Z-00-DX1.2398c0e0-47a6-4557-8e2d-3b890756900a_1_1024.npy
TCGA-BR-6563-01Z-00-DX1
What is suggested by the presence of spindle-shaped stromal cells and fibrotic changes in the image?
The presence of spindle-shaped stromal cells and fibrotic changes suggests a possible mesenchymal tumor or reactive process.
TCGA-STAD
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6563-01Z-00-DX1.2398c0e0-47a6-4557-8e2d-3b890756900a_0_1024.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6563-01Z-00-DX1.2398c0e0-47a6-4557-8e2d-3b890756900a_1_512.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6563-01Z-00-DX1.2398c0e0-47a6-4557-8e2d-3b890756900a_1_1024.npy
TCGA-BR-6564-01Z-00-DX1
What types of inflammatory cells are predominantly observed in the slide?
The slide predominantly shows dense infiltration of lymphocytes and plasma cells, indicating chronic inflammation.
TCGA-STAD
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6564-01Z-00-DX1.ad86e83f-ebfd-4eee-8bf8-7490c5f79a17_0_1024.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6564-01Z-00-DX1.ad86e83f-ebfd-4eee-8bf8-7490c5f79a17_1_512.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6564-01Z-00-DX1.ad86e83f-ebfd-4eee-8bf8-7490c5f79a17_1_1024.npy
TCGA-BR-6564-01Z-00-DX1
What are the characteristics of the neoplastic processes observed in the slide?
The neoplastic processes are characterized by poorly differentiated adenocarcinoma and neuroendocrine tumors, with atypical cells exhibiting high nuclear-to-cytoplasmic ratios, pleomorphic nuclei, and desmoplastic stromal reactions.
TCGA-STAD
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6564-01Z-00-DX1.ad86e83f-ebfd-4eee-8bf8-7490c5f79a17_0_1024.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6564-01Z-00-DX1.ad86e83f-ebfd-4eee-8bf8-7490c5f79a17_1_512.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6564-01Z-00-DX1.ad86e83f-ebfd-4eee-8bf8-7490c5f79a17_1_1024.npy
TCGA-BR-6564-01Z-00-DX1
What evidence of aggressive tumor behavior is seen in the image?
Evidence of aggressive tumor behavior includes vascular invasion and the presence of necrosis, suggesting rapid tumor growth.
TCGA-STAD
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6564-01Z-00-DX1.ad86e83f-ebfd-4eee-8bf8-7490c5f79a17_0_1024.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6564-01Z-00-DX1.ad86e83f-ebfd-4eee-8bf8-7490c5f79a17_1_512.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6564-01Z-00-DX1.ad86e83f-ebfd-4eee-8bf8-7490c5f79a17_1_1024.npy
TCGA-BR-6564-01Z-00-DX1
Is there any evidence of ulceration in the observed sections?
There is no evidence of ulceration in the observed sections.
TCGA-STAD
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6564-01Z-00-DX1.ad86e83f-ebfd-4eee-8bf8-7490c5f79a17_0_1024.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6564-01Z-00-DX1.ad86e83f-ebfd-4eee-8bf8-7490c5f79a17_1_512.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6564-01Z-00-DX1.ad86e83f-ebfd-4eee-8bf8-7490c5f79a17_1_1024.npy
TCGA-BR-6565-01Z-00-DX1
What is the predominant type of carcinoma observed in the slide?
The slide shows gastric adenocarcinoma, characterized by irregular glandular structures infiltrating the stroma.
TCGA-STAD
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6565-01Z-00-DX1.0e53f881-e0d7-4906-946a-67f612906476_0_1024.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6565-01Z-00-DX1.0e53f881-e0d7-4906-946a-67f612906476_1_512.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6565-01Z-00-DX1.0e53f881-e0d7-4906-946a-67f612906476_1_1024.npy
TCGA-BR-6565-01Z-00-DX1
What are the key morphological features of the neoplastic cells in the slide?
The neoplastic cells are atypical epithelial cells with nuclear pleomorphism, hyperchromasia, and increased mitotic activity.
TCGA-STAD
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6565-01Z-00-DX1.0e53f881-e0d7-4906-946a-67f612906476_0_1024.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6565-01Z-00-DX1.0e53f881-e0d7-4906-946a-67f612906476_1_512.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6565-01Z-00-DX1.0e53f881-e0d7-4906-946a-67f612906476_1_1024.npy
TCGA-BR-6565-01Z-00-DX1
What stromal reaction is frequently observed in response to tumor invasion?
Desmoplastic stromal reactions are frequently observed, indicating a fibrous response to tumor invasion.
TCGA-STAD
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6565-01Z-00-DX1.0e53f881-e0d7-4906-946a-67f612906476_0_1024.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6565-01Z-00-DX1.0e53f881-e0d7-4906-946a-67f612906476_1_512.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6565-01Z-00-DX1.0e53f881-e0d7-4906-946a-67f612906476_1_1024.npy
TCGA-BR-6565-01Z-00-DX1
Is there evidence of lymphovascular invasion in the slide?
Yes, there is evidence of lymphovascular invasion, suggesting potential for metastasis.
TCGA-STAD
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6565-01Z-00-DX1.0e53f881-e0d7-4906-946a-67f612906476_0_1024.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6565-01Z-00-DX1.0e53f881-e0d7-4906-946a-67f612906476_1_512.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6565-01Z-00-DX1.0e53f881-e0d7-4906-946a-67f612906476_1_1024.npy
TCGA-BR-6565-01Z-00-DX1
What indicates the aggressive nature of the carcinoma in the slide?
Areas of necrosis within the tumor mass indicate the aggressive nature of the carcinoma.
TCGA-STAD
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6565-01Z-00-DX1.0e53f881-e0d7-4906-946a-67f612906476_0_1024.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6565-01Z-00-DX1.0e53f881-e0d7-4906-946a-67f612906476_1_512.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6565-01Z-00-DX1.0e53f881-e0d7-4906-946a-67f612906476_1_1024.npy
TCGA-BR-6565-01Z-00-DX1
What type of inflammatory infiltrate is observed in the lamina propria?
Dense inflammatory infiltrates, predominantly lymphocytes and plasma cells, are observed in the lamina propria.
TCGA-STAD
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6565-01Z-00-DX1.0e53f881-e0d7-4906-946a-67f612906476_0_1024.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6565-01Z-00-DX1.0e53f881-e0d7-4906-946a-67f612906476_1_512.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6565-01Z-00-DX1.0e53f881-e0d7-4906-946a-67f612906476_1_1024.npy
TCGA-BR-6565-01Z-00-DX1
What does the presence of inflammatory infiltrates in the slide suggest?
The presence of inflammatory infiltrates suggests chronic gastritis, possibly related to Helicobacter pylori infection.
TCGA-STAD
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6565-01Z-00-DX1.0e53f881-e0d7-4906-946a-67f612906476_0_1024.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6565-01Z-00-DX1.0e53f881-e0d7-4906-946a-67f612906476_1_512.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6565-01Z-00-DX1.0e53f881-e0d7-4906-946a-67f612906476_1_1024.npy
TCGA-BR-6565-01Z-00-DX1
What features in the slide suggest chronicity and a reactive process?
Ulceration and fibrosis in some sections suggest chronicity and a reactive process.
TCGA-STAD
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6565-01Z-00-DX1.0e53f881-e0d7-4906-946a-67f612906476_0_1024.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6565-01Z-00-DX1.0e53f881-e0d7-4906-946a-67f612906476_1_512.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6565-01Z-00-DX1.0e53f881-e0d7-4906-946a-67f612906476_1_1024.npy
TCGA-BR-6565-01Z-00-DX1
How does the muscularis propria appear in the slide?
The muscularis propria appears normal in several patches, with well-organized smooth muscle fibers, indicating no neoplastic infiltration in these areas.
TCGA-STAD
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6565-01Z-00-DX1.0e53f881-e0d7-4906-946a-67f612906476_0_1024.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6565-01Z-00-DX1.0e53f881-e0d7-4906-946a-67f612906476_1_512.npy
/bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-STAD/TCGA-BR-6565-01Z-00-DX1.0e53f881-e0d7-4906-946a-67f612906476_1_1024.npy