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README.md
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---
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configs:
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- config_name: default
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data_files: data.parquet
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- config_name: clusters
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data_files:
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- clusters/clusters.zip
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- clusters/mapping.json
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- config_name: id05
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data_files:
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- split: train
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path: id05/train.parquet
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- split: validation
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path: id05/valid.parquet
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- split: test
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path: id05/test.parquet
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- config_name: id07
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data_files:
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- split: train
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path: id07/train.parquet
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- split: validation
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path: id07/valid.parquet
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- split: test
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path: id07/test.parquet
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- config_name: id09
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data_files:
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- split: train
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path: id09/train.parquet
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- split: validation
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path: id09/valid.parquet
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- split: test
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path: id09/test.parquet
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---
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# *SoftDis* dataset
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*SoftDis* is a dataset for the exploration of disordered regions in protein structures, and their relations with interacting sites.
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The concept of soft disorder was introduced in [[Seoane and Carbone, 2021]](https://www.google.com/url?sa=t&source=web&rct=j&opi=89978449&url=https://journals.plos.org/ploscompbiol/article%3Fid%3D10.1371/journal.pcbi.1008546&ved=2ahUKEwj43OOAmISLAxW4UKQEHRszOaIQFnoECBQQAQ&usg=AOvVaw1YXiijzojYENeuv-rxtzLD), as a general term for regions in a protein identified as flexible (characterized by high B-factor) or intermittently missing across different X-ray crystal structures of the same sequence. The definition is derived from an extensive analysis of clusters of alternative structures for very similar protein sequences in the Protein Data Bankh (PDB).
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The current version of the dataset is based on the structures in the PDB up to 15-10-2024.
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## Dataset Creation
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## Dataset Structure
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