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2
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34.1k
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meta_information
dict
q23100
AbstractAMRules.debug
train
protected void debug(String string, int level) { if (VerbosityOption.getValue()>=level){ System.out.println(string); } }
java
{ "resource": "" }
q23101
AbstractAMRules.getVotes
train
public Vote getVotes(Instance instance) { ErrorWeightedVote errorWeightedVote=newErrorWeightedVote(); //DoubleVector combinedVote = new DoubleVector(); debug("Test",3); int numberOfRulesCovering = 0; VerboseToConsole(instance); // Verbose to console Dataset name. for (Rule rule : ruleSet) { if (rule...
java
{ "resource": "" }
q23102
SizeOf.isPresent
train
protected static synchronized boolean isPresent() { if (m_Present == null) { try { SizeOfAgent.fullSizeOf(new Integer(1)); m_Present = true; } catch (Throwable t) { m_Present = false; } } return m_Present; }
java
{ "resource": "" }
q23103
Plot.createScript
train
private String createScript(File resultFile) { String newLine = System.getProperty("line.separator"); int sourceFileIdx = 0; // terminal options; String script = "set term " + terminalOptions(Terminal.valueOf(outputTypeOption .getChosenLabel())) + newLine; script += "set output '" + resultFile.getAbsolutePat...
java
{ "resource": "" }
q23104
CMM_GTAnalysis.calculateGTPointQualities
train
private void calculateGTPointQualities(){ for (int p = 0; p < numPoints; p++) { CMMPoint cmdp = cmmpoints.get(p); if(!cmdp.isNoise()){ cmdp.connectivity = getConnectionValue(cmdp, cmdp.workclass()); cmdp.p.setMeasureValue("Connectivity", cmdp.connectivity)...
java
{ "resource": "" }
q23105
CMM_GTAnalysis.calculateGTClusterConnections
train
private void calculateGTClusterConnections(){ for (int c0 = 0; c0 < gt0Clusters.size(); c0++) { for (int c1 = 0; c1 < gt0Clusters.size(); c1++) { gt0Clusters.get(c0).calculateClusterConnection(c1, true); } } boolean changedConnection = true; w...
java
{ "resource": "" }
q23106
CMM_GTAnalysis.getNoiseSeparability
train
public double getNoiseSeparability(){ if(noise.isEmpty()) return 1; double connectivity = 0; for(int p : noise){ CMMPoint npoint = cmmpoints.get(p); double maxConnection = 0; //TODO: some kind of pruning possible. what about weighting? ...
java
{ "resource": "" }
q23107
CMM_GTAnalysis.getModelQuality
train
public double getModelQuality(){ for(int p = 0; p < numPoints; p++){ CMMPoint cmdp = cmmpoints.get(p); for(int hc = 0; hc < numGTClusters;hc++){ if(gtClustering.get(hc).getGroundTruth() != cmdp.trueClass){ if(gtClustering.get(hc).getInclusionProbabilit...
java
{ "resource": "" }
q23108
CMM_GTAnalysis.distance
train
private double distance(Instance inst1, double[] inst2){ double distance = 0.0; for (int i = 0; i < numDims; i++) { double d = inst1.value(i) - inst2[i]; distance += d * d; } return Math.sqrt(distance); }
java
{ "resource": "" }
q23109
CMM_GTAnalysis.getParameterString
train
public String getParameterString(){ String para = ""; para+="k="+knnNeighbourhood+";"; if(useExpConnectivity){ para+="lambdaConnX="+lambdaConnX+";"; para+="lambdaConn="+lamdaConn+";"; para+="lambdaConnRef="+lambdaConnRefXValue+";"; } para+="m="+clusterC...
java
{ "resource": "" }
q23110
HSVColorGenerator.generateColors
train
@Override public Color[] generateColors(int numColors) { Color[] colors = new Color[numColors]; // fix the seed to always get the same colors for the same numColors parameter and ranges for hue, saturation and brightness Random rand = new Random(0); for(int i = 0; i < numColors; ++i) { float hueRatio = i/...
java
{ "resource": "" }
q23111
HSTreeNode.updateMass
train
public void updateMass(Instance inst, boolean referenceWindow) { if(referenceWindow) r++; else l++; if(internalNode) { if(inst.value(this.splitAttribute) > this.splitValue) right.updateMass(inst, referenceWindow); else left.updateMass(inst, referenceWindow); } }
java
{ "resource": "" }
q23112
HSTreeNode.score
train
public double score(Instance inst, int sizeLimit) { double anomalyScore = 0.0; if(this.internalNode && this.r > sizeLimit) { if(inst.value(this.splitAttribute) > this.splitValue) anomalyScore = right.score(inst, sizeLimit); else anomalyScore = left.score(inst, sizeLimit); } else { anoma...
java
{ "resource": "" }
q23113
HSTreeNode.printNode
train
protected void printNode() { System.out.println(this.depth+", "+this.splitAttribute+", "+this.splitValue+", "+this.r); if(this.internalNode) { this.right.printNode(); this.left.printNode(); } }
java
{ "resource": "" }
q23114
Dstream.initialClustering
train
private void initialClustering() { //System.out.println("INITIAL CLUSTERING CALLED"); //printDStreamState(); // 1. Update the density of all grids in grid_list updateGridListDensity(); //printGridList(); // 2. Assign each dense grid to a distinct cluster // and // 3. Label all other grids as NO_CL...
java
{ "resource": "" }
q23115
Dstream.adjustForSparseGrid
train
private HashMap<DensityGrid, CharacteristicVector> adjustForSparseGrid(DensityGrid dg, CharacteristicVector cv, int dgClass) { HashMap<DensityGrid, CharacteristicVector> glNew = new HashMap<DensityGrid, CharacteristicVector>(); //System.out.print("Density grid "+dg.toString()+" is adjusted as a sparse grid at time...
java
{ "resource": "" }
q23116
Dstream.adjustForTransitionalGrid
train
private HashMap<DensityGrid, CharacteristicVector> adjustForTransitionalGrid(DensityGrid dg, CharacteristicVector cv, int dgClass) { //System.out.print("Density grid "+dg.toString()+" is adjusted as a transitional grid at time "+this.getCurrTime()+". "); // Among all neighbours of dg, find the grid h whose clus...
java
{ "resource": "" }
q23117
Dstream.cleanClusters
train
private void cleanClusters() { //System.out.println("Clean Clusters"); Iterator<GridCluster> clusIter = this.cluster_list.iterator(); ArrayList<GridCluster> toRem = new ArrayList<GridCluster>(); // Check to see if there are any empty clusters while(clusIter.hasNext()) { GridCluster c = clusIter.next();...
java
{ "resource": "" }
q23118
Dstream.removeSporadic
train
private void removeSporadic() { //System.out.println("REMOVE SPORADIC CALLED"); // 1. For each grid g in grid_list // a. If g is sporadic // i. If currTime - tg > gap, delete g from grid_list // ii. Else if (S1 && S2), mark as sporadic // iii. Else, mark as normal // b. Else // ...
java
{ "resource": "" }
q23119
Dstream.checkIfSporadic
train
private boolean checkIfSporadic(CharacteristicVector cv) { // Check S1 if(cv.getCurrGridDensity(this.getCurrTime(), this.getDecayFactor()) < densityThresholdFunction(cv.getDensityTimeStamp(), this.cl, this.getDecayFactor(), this.N)) { // Check S2 if(cv.getRemoveTime() == -1 || this.getCurrTime() >= ((1 + t...
java
{ "resource": "" }
q23120
Dstream.densityThresholdFunction
train
private double densityThresholdFunction(int tg, double cl, double decayFactor, int N) { return (cl * (1.0 - Math.pow(decayFactor, (this.getCurrTime()-tg+1.0))))/(N * (1.0 - decayFactor)); }
java
{ "resource": "" }
q23121
Dstream.mergeClusters
train
private void mergeClusters (int smallClus, int bigClus) { //System.out.println("Merge clusters "+smallClus+" and "+bigClus+"."); // Iterate through the density grids in grid_list to find those which are in highClass for (Map.Entry<DensityGrid, CharacteristicVector> grid : grid_list.entrySet()) { DensityGr...
java
{ "resource": "" }
q23122
Dstream.updateGridListDensity
train
private void updateGridListDensity() { for (Map.Entry<DensityGrid, CharacteristicVector> grid : grid_list.entrySet()) { DensityGrid dg = grid.getKey(); CharacteristicVector cvOfG = grid.getValue(); dg.setVisited(false); cvOfG.updateGridDensity(this.getCurrTime(), this.getDecayFactor(), this.getDL(), t...
java
{ "resource": "" }
q23123
Dstream.printGridList
train
public void printGridList() { System.out.println("Grid List. Size "+this.grid_list.size()+"."); for (Map.Entry<DensityGrid, CharacteristicVector> grid : grid_list.entrySet()) { DensityGrid dg = grid.getKey(); CharacteristicVector cv = grid.getValue(); if (cv.getAttribute() != SPARSE) { double...
java
{ "resource": "" }
q23124
Dstream.printGridClusters
train
public void printGridClusters() { System.out.println("List of Clusters. Total "+this.cluster_list.size()+"."); for(GridCluster gc : this.cluster_list) { System.out.println(gc.getClusterLabel()+": "+gc.getWeight()+" {"+gc.toString()+"}"); } }
java
{ "resource": "" }
q23125
DataSet.addObject
train
public void addObject(DataSet dataSet) throws Exception { DataObject[] dataObjects = dataSet.getDataObjectArray(); for (int i = 0; i < dataObjects.length; i++) { this.addObject(dataObjects[i]); } }
java
{ "resource": "" }
q23126
DataSet.getNrOfClasses
train
public int getNrOfClasses() { HashMap<Integer, Integer> classes = new HashMap<Integer, Integer>(); for (DataObject currentObject : dataList) { if (!classes.containsKey(currentObject.getClassLabel())) classes.put(currentObject.getClassLabel(), 1); } return classes.size(); }
java
{ "resource": "" }
q23127
DataSet.getDataSetsPerClass
train
public DataSet[] getDataSetsPerClass() throws Exception { DataSet[] dataSetsPerClass = new DataSet[this.getNrOfClasses()]; // create a new data set for each class for (int i = 0; i < dataSetsPerClass.length; i++) { dataSetsPerClass[i] = new DataSet(this.nrOfDimensions); } // fill the data...
java
{ "resource": "" }
q23128
DataSet.getVariances
train
public double[] getVariances() { double N = this.size(); double[] LS = new double[this.getNrOfDimensions()]; double[] SS = new double[this.getNrOfDimensions()]; double[] tmpFeatures; double[] variances = new double[this.getNrOfDimensions()]; for (DataObject dataObject : dataList) { tmpFeatures = d...
java
{ "resource": "" }
q23129
SparseInstanceData.toDoubleArray
train
@Override public double[] toDoubleArray() { double[] array = new double[numAttributes()]; for (int i = 0; i < numValues(); i++) { array[index(i)] = valueSparse(i); } return array; }
java
{ "resource": "" }
q23130
AnyOutCore.calcC1
train
private double calcC1(int objectId) { int nrOfPreviousResults = previousOScoreResultList.get(objectId).size(); if (nrOfPreviousResults == 0) { return 0.0; } int count=1; double difSum_k = Math.abs(lastOScoreResult.get(objectId)-previousOScoreResultList.get(objectId).get(nrOfPreviousResults-1)); ...
java
{ "resource": "" }
q23131
Summary.invertedSumariesPerMeasure
train
public void invertedSumariesPerMeasure( String path) { int cont = 0; int algorithmSize = this.streams.get(0).algorithm.size(); int streamSize = this.streams.size(); int measureSize = this.streams.get(0).algorithm.get(0).measures.size(); while (cont != measureSize) { ...
java
{ "resource": "" }
q23132
Summary.generateCSV
train
public void generateCSV() { int cont = 0; int algorithmSize = this.streams.get(0).algorithm.size(); int streamSize = this.streams.size(); int measureSize = this.streams.get(0).algorithm.get(0).measures.size(); while (cont != measureSize) { String out...
java
{ "resource": "" }
q23133
DensityGrid.getNeighbours
train
public ArrayList<DensityGrid> getNeighbours() { ArrayList<DensityGrid> neighbours = new ArrayList<DensityGrid>(); DensityGrid h; int[] hCoord = this.getCoordinates(); for (int i = 0 ; i < this.dimensions ; i++) { hCoord[i] = hCoord[i]-1; h = new DensityGrid(hCoord); neighbours.add(h); hCoo...
java
{ "resource": "" }
q23134
DensityGrid.getInclusionProbability
train
@Override public double getInclusionProbability(Instance instance) { for (int i = 0 ; i < this.dimensions ; i++) { if ((int) instance.value(i) != this.coordinates[i]) return 0.0; } return 1.0; }
java
{ "resource": "" }
q23135
Stream.readBuffer
train
public void readBuffer(List<String> algPath, List<String> algNames, List<Measure> measures) { BufferedReader buffer = null; for (int i = 0; i < algPath.size(); i++) { try { buffer = new BufferedReader(new FileReader(algPath.get(i))); } catch (FileNotFoundException...
java
{ "resource": "" }
q23136
RandomRBFGeneratorEvents.fireClusterChange
train
protected void fireClusterChange(long timestamp, String type, String message) { // if we have no listeners, do nothing... if (listeners != null && !listeners.isEmpty()) { // create the event object to send ClusterEvent event = new ClusterEvent(this, timestamp, type , message); // make...
java
{ "resource": "" }
q23137
ClassOptionEditComponent.notifyChangeListeners
train
protected void notifyChangeListeners() { ChangeEvent e = new ChangeEvent(this); for (ChangeListener l : changeListeners) { l.stateChanged(e); } }
java
{ "resource": "" }
q23138
GraphScatter.setGraph
train
public void setGraph(MeasureCollection[] measures, MeasureCollection[] stds, double[] variedParamValues, Color[] colors) { this.variedParamValues = variedParamValues; super.setGraph(measures, stds, colors); }
java
{ "resource": "" }
q23139
GraphScatter.scatter
train
private void scatter(Graphics g, int i) { int height = getHeight(); int width = getWidth(); int x = (int)(((this.variedParamValues[i] - this.lower_x_value) / (this.upper_x_value - this.lower_x_value)) * width); double value = this.measures[i].getLastValue(this.measureSelected); if(Doub...
java
{ "resource": "" }
q23140
AbstractMOAObject.copy
train
public static MOAObject copy(MOAObject obj) { try { return (MOAObject) SerializeUtils.copyObject(obj); } catch (Exception e) { throw new RuntimeException("Object copy failed.", e); } }
java
{ "resource": "" }
q23141
GUIDefaults.get
train
public static String get(String property, String defaultValue) { return PROPERTIES.getProperty(property, defaultValue); }
java
{ "resource": "" }
q23142
GUIDefaults.getTabs
train
public static String[] getTabs() { String[] result; String tabs; // read and split on comma tabs = get("Tabs", "moa.gui.ClassificationTabPanel,moa.gui.RegressionTabPanel,moa.gui.MultiLabelTabPanel,moa.gui.MultiTargetTabPanel,moa.gui.clustertab.ClusteringTabPanel,moa.gui.outliertab.Outli...
java
{ "resource": "" }
q23143
GUIDefaults.getFrameWidth
train
public static int getFrameWidth() { int result; String str; str = get("FrameWidth", "1200"); try { result = Integer.parseInt(str); } catch (Exception e) { result = 1200; } return result; }
java
{ "resource": "" }
q23144
GUIDefaults.main
train
public static void main(String[] args) { Enumeration names; String name; Vector sorted; System.out.println("\nMOA defaults:"); names = PROPERTIES.propertyNames(); // sort names sorted = new Vector(); while (names.hasMoreElements()) { sorted.a...
java
{ "resource": "" }
q23145
ClustreamKernel.inverseError
train
public static double inverseError(double x) { double z = Math.sqrt(Math.PI) * x; double res = (z) / 2; double z2 = z * z; double zProd = z * z2; // z^3 res += (1.0 / 24) * zProd; zProd *= z2; // z^5 res += (7.0 / 960) * zProd; zProd *= z2; // z^7 ...
java
{ "resource": "" }
q23146
BICO.bicoUpdate
train
protected void bicoUpdate(double[] x) { assert (!this.bufferPhase && this.numDimensions == x.length); // Starts with the global root node as the current root node ClusteringTreeNode r = this.root; int i = 1; while (true) { ClusteringTreeNode y = r.nearestChild(x); // Checks if the point can not be added...
java
{ "resource": "" }
q23147
BICO.rebuild
train
protected void rebuild() { // Checks if the number of nodes in the tree exceeds the maximum number while (this.rootCount > this.maxNumClusterFeatures) { // Doubles the global threshold this.T *= 2.0; this.root.setThreshold(calcRSquared(1)); // Adds all nodes to the ClusteringFeature tree again Queue<...
java
{ "resource": "" }
q23148
BICO.bicoCFUpdate
train
protected void bicoCFUpdate(ClusteringTreeNode x) { // Starts with the global root node as the current root node ClusteringTreeNode r = this.root; int i = 1; while (true) { ClusteringTreeNode y = r.nearestChild(x.getCenter()); // Checks if the node can not be merged to the current level if (r.hasNoChil...
java
{ "resource": "" }
q23149
NearestNeighbourSearch.combSort11
train
public static void combSort11(double arrayToSort[], int linkedArray[]) { int switches, j, top, gap; double hold1; int hold2; gap = arrayToSort.length; do { gap=(int)(gap/1.3); switch(gap) { case 0: gap = 1; break; case 9: case 10: gap=11;...
java
{ "resource": "" }
q23150
NearestNeighbourSearch.quickSort
train
public static void quickSort(double[] arrayToSort, double[] linkedArray, int left, int right) { if (left < right) { int middle = partition(arrayToSort, linkedArray, left, right); quickSort(arrayToSort, linkedArray, left, middle); quickSort(arrayToSort, linkedArray, middle + 1, right); } }
java
{ "resource": "" }
q23151
KDTree.kNearestNeighbours
train
public Instances kNearestNeighbours(Instance target, int k) throws Exception { checkMissing(target); MyHeap heap = new MyHeap(k); findNearestNeighbours(target, m_Root, k, heap, 0.0); Instances neighbours = new Instances(m_Instances, (heap.size() + heap .noOfKthNearest())); m_DistanceLi...
java
{ "resource": "" }
q23152
KDTree.update
train
public void update(Instance instance) throws Exception { // better to change // to addInstance if (m_Instances == null) throw new Exception("No instances supplied yet. Have to call " + "setInstances(instances) with a set of Instances " + "f...
java
{ "resource": "" }
q23153
KDTree.checkMissing
train
protected void checkMissing(Instances instances) throws Exception { for (int i = 0; i < instances.numInstances(); i++) { Instance ins = instances.instance(i); for (int j = 0; j < ins.numValues(); j++) { if (ins.index(j) != ins.classIndex()) if (ins.isMissingSparse(j)) { thr...
java
{ "resource": "" }
q23154
KDTree.checkMissing
train
protected void checkMissing(Instance ins) throws Exception { for (int j = 0; j < ins.numValues(); j++) { if (ins.index(j) != ins.classIndex()) if (ins.isMissingSparse(j)) { throw new Exception("ERROR: KDTree can not deal with missing " + "values. Please run ReplaceMissingValues...
java
{ "resource": "" }
q23155
KDTree.enumerateMeasures
train
public Enumeration enumerateMeasures() { Vector<String> newVector = new Vector<String>(); newVector.addElement("measureTreeSize"); newVector.addElement("measureNumLeaves"); newVector.addElement("measureMaxDepth"); return newVector.elements(); }
java
{ "resource": "" }
q23156
KDTree.getMeasure
train
public double getMeasure(String additionalMeasureName) { if (additionalMeasureName.compareToIgnoreCase("measureMaxDepth") == 0) { return measureMaxDepth(); } else if (additionalMeasureName.compareToIgnoreCase("measureTreeSize") == 0) { return measureTreeSize(); } else if (additionalMeasureName.c...
java
{ "resource": "" }
q23157
KDTree.centerInstances
train
public void centerInstances(Instances centers, int[] assignments, double pc) throws Exception { int[] centList = new int[centers.numInstances()]; for (int i = 0; i < centers.numInstances(); i++) centList[i] = i; determineAssignments(m_Root, centers, centList, assignments, pc); }
java
{ "resource": "" }
q23158
KDTree.determineAssignments
train
protected void determineAssignments(KDTreeNode node, Instances centers, int[] candidates, int[] assignments, double pc) throws Exception { // reduce number of owners for current hyper rectangle int[] owners = refineOwners(node, centers, candidates); // only one owner if (owners.length == 1) { ...
java
{ "resource": "" }
q23159
KDTree.refineOwners
train
protected int[] refineOwners(KDTreeNode node, Instances centers, int[] candidates) throws Exception { int[] owners = new int[candidates.length]; double minDistance = Double.POSITIVE_INFINITY; int ownerIndex = -1; Instance owner; int numCand = candidates.length; double[] distance = new dou...
java
{ "resource": "" }
q23160
KDTree.distanceToHrect
train
protected double distanceToHrect(KDTreeNode node, Instance x) throws Exception { double distance = 0.0; Instance closestPoint = (Instance)x.copy(); boolean inside; inside = clipToInsideHrect(node, closestPoint); if (!inside) distance = m_EuclideanDistance.distance(closestPoint, x); return...
java
{ "resource": "" }
q23161
KDTree.clipToInsideHrect
train
protected boolean clipToInsideHrect(KDTreeNode node, Instance x) { boolean inside = true; for (int i = 0; i < m_Instances.numAttributes(); i++) { // TODO treat nominals differently!?? if (x.value(i) < node.m_NodeRanges[i][MIN]) { x.setValue(i, node.m_NodeRanges[i][MIN]); inside = fa...
java
{ "resource": "" }
q23162
KDTree.assignSubToCenters
train
public void assignSubToCenters(KDTreeNode node, Instances centers, int[] centList, int[] assignments) throws Exception { // todo: undecided situations int numCent = centList.length; // WARNING: assignments is "input/output-parameter" // should not be null and the following should not happen i...
java
{ "resource": "" }
q23163
KDTree.setDistanceFunction
train
public void setDistanceFunction(DistanceFunction df) throws Exception { if (!(df instanceof EuclideanDistance)) throw new Exception("KDTree currently only works with " + "EuclideanDistanceFunction."); m_DistanceFunction = m_EuclideanDistance = (EuclideanDistance) df; }
java
{ "resource": "" }
q23164
ClusteringTreeNode.count
train
@Deprecated public int count() { int count = (clusteringFeature != null) ? 1 : 0; for (ClusteringTreeNode child : children) { count += child.count(); } return count; }
java
{ "resource": "" }
q23165
ClusteringTreeNode.addToClustering
train
public Clustering addToClustering(Clustering clustering) { if (center != null && getClusteringFeature() != null) { clustering.add(getClusteringFeature().toCluster()); } for (ClusteringTreeNode child : children) { child.addToClustering(clustering); } return clustering; }
java
{ "resource": "" }
q23166
ClusteringTreeNode.addToClusteringCenters
train
public List<double[]> addToClusteringCenters(List<double[]> clustering) { if (center != null && getClusteringFeature() != null) { clustering.add(getClusteringFeature().toClusterCenter()); } for (ClusteringTreeNode child : children) { child.addToClusteringCenters(clustering); } return clustering; }
java
{ "resource": "" }
q23167
ClusteringTreeNode.printClusteringCenters
train
public void printClusteringCenters(Writer stream) throws IOException { if (center != null && getClusteringFeature() != null) { getClusteringFeature().printClusterCenter(stream); } for (ClusteringTreeNode child : children) { child.printClusteringCenters(stream); } }
java
{ "resource": "" }
q23168
ClusteringTreeNode.nearestChild
train
public ClusteringTreeNode nearestChild(double[] pointA) { assert (this.center.length == pointA.length); double minDistance = Double.POSITIVE_INFINITY; ClusteringTreeNode min = null; for (ClusteringTreeNode node : this.getChildren()) { double d = Metric.distance(pointA, node.getCenter()); if (d < minDistan...
java
{ "resource": "" }
q23169
ClusteringTreeNode.addChild
train
public boolean addChild(ClusteringTreeNode e) { assert (this.center.length == e.center.length); return this.children.add(e); }
java
{ "resource": "" }
q23170
RCD.getPreviousClassifier
train
private ClassifierKS getPreviousClassifier(Classifier classifier, List<Instance> instances) { ExecutorService threadPool = Executors.newFixedThreadPool(this.threadSizeOption.getValue()); int SIZE = this.classifiers.size(); Map<Integer, Future<Double>> futures = new HashMap<>(); ...
java
{ "resource": "" }
q23171
ClusKernel.makeOlder
train
protected void makeOlder(long timeDifference, double negLambda) { if (timeDifference == 0) { return; } //double weightFactor = AuxiliaryFunctions.weight(negLambda, timeDifference); assert (negLambda < 0); assert (timeDifference > 0); double weightFactor = Mat...
java
{ "resource": "" }
q23172
ClusKernel.overwriteOldCluster
train
protected void overwriteOldCluster(ClusKernel other) { this.totalN = other.totalN; this.N = other.N; //AuxiliaryFunctions.overwriteDoubleArray(this.LS, other.LS); //AuxiliaryFunctions.overwriteDoubleArray(this.SS, other.SS); assert (LS.length == other.LS.length); System.a...
java
{ "resource": "" }
q23173
SAMkNN.getVotesForInstance
train
@Override public double[] getVotesForInstance(Instance inst) { double vSTM[]; double vLTM[]; double vCM[]; double v[]; double distancesSTM[]; double distancesLTM[]; int predClassSTM = 0; int predClassLTM = 0; int predClassCM = 0; try { if (this.stm.numInstances()>0) { d...
java
{ "resource": "" }
q23174
SAMkNN.clusterDown
train
private void clusterDown(){ int classIndex = this.ltm.classIndex(); for (int c = 0; c <= this.maxClassValue; c++){ List<double[]> classSamples = new ArrayList<>(); for (int i = this.ltm.numInstances()-1; i >-1 ; i--) { if (this.ltm.get(i).classValue() == c) { classSamples.add(this.ltm.get(i).toDouble...
java
{ "resource": "" }
q23175
SAMkNN.memorySizeCheck
train
private void memorySizeCheck(){ if (this.stm.numInstances() + this.ltm.numInstances() > this.maxSTMSize + this.maxLTMSize){ if (this.ltm.numInstances() > this.maxLTMSize){ this.clusterDown(); }else{ //shift values from STM directly to LTM since STM is full int numShifts = this.maxLTMSize - this.ltm.numI...
java
{ "resource": "" }
q23176
SAMkNN.clean
train
private void clean(Instances cleanAgainst, Instances toClean, boolean onlyLast) { if (cleanAgainst.numInstances() > this.kOption.getValue() && toClean.numInstances() > 0){ if (onlyLast){ cleanSingle(cleanAgainst, (cleanAgainst.numInstances()-1), toClean); }else{ for (int i=0; i < cleanAgainst.numInstanc...
java
{ "resource": "" }
q23177
SAMkNN.getDistanceWeightedVotes
train
private double [] getDistanceWeightedVotes(double distances[], int[] nnIndices, Instances instances){ double v[] = new double[this.maxClassValue +1]; for (int nnIdx : nnIndices) { v[(int)instances.instance(nnIdx).classValue()] += 1./Math.max(distances[nnIdx], 0.000000001); } return v; ...
java
{ "resource": "" }
q23178
SAMkNN.getClassFromVotes
train
private int getClassFromVotes(double votes[]){ double maxVote = -1; int maxVoteClass = -1; for (int i = 0; i < votes.length; i++){ if (votes[i] > maxVote){ maxVote = votes[i]; maxVoteClass = i; } } return maxVoteClass; }
java
{ "resource": "" }
q23179
SAMkNN.getDistance
train
private double getDistance(Instance sample, Instance sample2) { double sum=0; for (int i=0; i<sample.numInputAttributes(); i++) { double diff = sample.valueInputAttribute(i)-sample2.valueInputAttribute(i); sum += diff*diff; } return Math.sqrt(sum); ...
java
{ "resource": "" }
q23180
SAMkNN.get1ToNDistances
train
private double[] get1ToNDistances(Instance sample, Instances samples){ double distances[] = new double[samples.numInstances()]; for (int i=0; i<samples.numInstances(); i++){ distances[i] = this.getDistance(sample, samples.get(i)); } return distances; }
java
{ "resource": "" }
q23181
SAMkNN.adaptHistories
train
private void adaptHistories(int numberOfDeletions){ for (int i = 0; i < numberOfDeletions; i++){ SortedSet<Integer> keys = new TreeSet<>(this.predictionHistories.keySet()); this.predictionHistories.remove(keys.first()); keys = new TreeSet<>(this.predictionHistories.keySet()); for (Integer key : keys){ ...
java
{ "resource": "" }
q23182
SAMkNN.getHistoryErrorRate
train
private double getHistoryErrorRate(List<Integer> predHistory){ double sumCorrect = 0; for (Integer e : predHistory) { sumCorrect += e; } return 1. - (sumCorrect / predHistory.size()); }
java
{ "resource": "" }
q23183
Metric.distanceSquared
train
public static double distanceSquared(double[] pointA) { double distance = 0.0; for (int i = 0; i < pointA.length; i++) { distance += pointA[i] * pointA[i]; } return distance; }
java
{ "resource": "" }
q23184
Metric.distanceSquared
train
public static double distanceSquared(double[] pointA, double[] pointB, int offsetB) { assert (pointA.length == pointB.length + offsetB); double distance = 0.0; for (int i = 0; i < pointA.length; i++) { double d = pointA[i] - pointB[i + offsetB]; distance += d * d; } return distance; }
java
{ "resource": "" }
q23185
Metric.distance
train
public static double distance(double[] pointA, double[] pointB, int offsetB) { return Math.sqrt(distanceSquared(pointA, pointB, offsetB)); }
java
{ "resource": "" }
q23186
Metric.distanceWithDivisionSquared
train
public static double distanceWithDivisionSquared(double[] pointA, double dA) { double distance = 0.0; for (int i = 0; i < pointA.length; i++) { double d = pointA[i] / dA; distance += d * d; } return distance; }
java
{ "resource": "" }
q23187
Metric.distanceWithDivision
train
public static double distanceWithDivision(double[] pointA, double dA, double[] pointB) { return Math.sqrt(distanceWithDivisionSquared(pointA, dA, pointB)); }
java
{ "resource": "" }
q23188
Metric.dotProduct
train
public static double dotProduct(double[] pointA) { double product = 0.0; for (int i = 0; i < pointA.length; i++) { product += pointA[i] * pointA[i]; } return product; }
java
{ "resource": "" }
q23189
Metric.dotProductWithAddition
train
public static double dotProductWithAddition(double[] pointA1, double[] pointA2, double[] pointB) { assert (pointA1.length == pointA2.length && pointA1.length == pointB.length); double product = 0.0; for (int i = 0; i < pointA1.length; i++) { product += (pointA1[i] + pointA2[i]) * pointB[i]; } return pro...
java
{ "resource": "" }
q23190
Metric.dotProductWithAddition
train
public static double dotProductWithAddition(double[] pointA1, double[] pointA2, double[] pointB1, double[] pointB2) { assert (pointA1.length == pointA2.length && pointB1.length == pointB2.length && pointA1.length == pointB1.length); double product = 0.0; for (int i = 0; i < pointA1.length; i++) { produc...
java
{ "resource": "" }
q23191
WekaToSamoaInstanceConverter.samoaInstance
train
public Instance samoaInstance(weka.core.Instance inst) { Instance samoaInstance; if (inst instanceof weka.core.SparseInstance) { double[] attributeValues = new double[inst.numValues()]; int[] indexValues = new int[inst.numValues()]; for (int i = 0; i < inst.numValues(...
java
{ "resource": "" }
q23192
WekaToSamoaInstanceConverter.samoaInstances
train
public Instances samoaInstances(weka.core.Instances instances) { Instances samoaInstances = samoaInstancesInformation(instances); //We assume that we have only one samoaInstanceInformation for WekaToSamoaInstanceConverter this.samoaInstanceInformation = samoaInstances; for (int i = 0; i ...
java
{ "resource": "" }
q23193
WekaToSamoaInstanceConverter.samoaInstancesInformation
train
public Instances samoaInstancesInformation(weka.core.Instances instances) { Instances samoaInstances; List<Attribute> attInfo = new ArrayList<Attribute>(); for (int i = 0; i < instances.numAttributes(); i++) { attInfo.add(samoaAttribute(i, instances.attribute(i))); } ...
java
{ "resource": "" }
q23194
WekaToSamoaInstanceConverter.samoaAttribute
train
protected Attribute samoaAttribute(int index, weka.core.Attribute attribute) { Attribute samoaAttribute; if (attribute.isNominal()) { Enumeration enu = attribute.enumerateValues(); List<String> attributeValues = new ArrayList<String>(); while (enu.hasMoreElements()) {...
java
{ "resource": "" }
q23195
ImagePanel.doSaveAs
train
@Override public void doSaveAs() throws IOException { JFileChooser fileChooser = new JFileChooser(); ExtensionFileFilter filterPNG = new ExtensionFileFilter("PNG Image Files", ".png"); fileChooser.addChoosableFileFilter(filterPNG); ExtensionFileFilter filterJPG = new ExtensionFileF...
java
{ "resource": "" }
q23196
RuleClassifier.round
train
protected BigDecimal round(double val){ BigDecimal value = new BigDecimal(val); if(val!=0.0){ value = value.setScale(3, BigDecimal.ROUND_DOWN); } return value; }
java
{ "resource": "" }
q23197
RuleClassifier.initializeRuleStatistics
train
public void initializeRuleStatistics(RuleClassification rl, Predicates pred, Instance inst) { rl.predicateSet.add(pred); rl.obserClassDistrib=new DoubleVector(); rl.observers=new AutoExpandVector<AttributeClassObserver>(); rl.observersGauss=new AutoExpandVector<AttributeClassObserver>(); rl.instancesSeen = 0;...
java
{ "resource": "" }
q23198
RuleClassifier.updateRuleAttribStatistics
train
public void updateRuleAttribStatistics(Instance inst, RuleClassification rl, int ruleIndex){ rl.instancesSeen++; if(rl.squaredAttributeStatisticsSupervised.size() == 0 && rl.attributeStatisticsSupervised.size() == 0){ for (int s = 0; s < inst.numAttributes() -1; s++) { ArrayList<Double> temp1 = new ArrayLis...
java
{ "resource": "" }
q23199
RuleClassifier.createRule
train
public void createRule(Instance inst) { int remainder = (int)Double.MAX_VALUE; int numInstanciaObservers = (int)this.observedClassDistribution.sumOfValues(); if (numInstanciaObservers != 0 && this.gracePeriodOption.getValue() != 0) { remainder = (numInstanciaObservers) % (this.gracePeriodOption.getValue()); ...
java
{ "resource": "" }