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q10500
compute_objective_value
train
def compute_objective_value(objective_func, parameters, data=None, cl_runtime_info=None): """Calculate and return the objective function value of the given model for the given parameters. Args: objective_func (mot.lib.cl_function.CLFunction): A CL function with the signature: .. code-block...
python
{ "resource": "" }
q10501
get_log
train
def get_log(username): """ Return a list of page views. Each item is a dict with `datetime`, `method`, `path` and `code` keys. """ redis = get_redis_client() log_key = 'log:{}'.format(username) raw_log = redis.lrange(log_key, 0, -1) log = [] for raw_item in raw_log: item = j...
python
{ "resource": "" }
q10502
get_token
train
def get_token(username, length=20, timeout=20): """ Obtain an access token that can be passed to a websocket client. """ redis = get_redis_client() token = get_random_string(length) token_key = 'token:{}'.format(token) redis.set(token_key, username) redis.expire(token_key, timeout) r...
python
{ "resource": "" }
q10503
UserLogMiddleware.get_log
train
def get_log(self, request, response): """ Return a dict of data to log for a given request and response. Override this method if you need to log a different set of values. """ return { 'method': request.method, 'path': request.get_full_path(), ...
python
{ "resource": "" }
q10504
MusicManager.download
train
def download(self, song): """Download a song from a Google Music library. Parameters: song (dict): A song dict. Returns: tuple: Song content as bytestring, suggested filename. """ song_id = song['id'] response = self._call( mm_calls.Export, self.uploader_id, song_id) audio = response.bo...
python
{ "resource": "" }
q10505
MusicManager.quota
train
def quota(self): """Get the uploaded track count and allowance. Returns: tuple: Number of uploaded tracks, number of tracks allowed. """ response = self._call( mm_calls.ClientState, self.uploader_id ) client_state = response.body.clientstate_response return (client_state.total_track_count, cli...
python
{ "resource": "" }
q10506
MusicManager.songs
train
def songs(self, *, uploaded=True, purchased=True): """Get a listing of Music Library songs. Returns: list: Song dicts. """ if not uploaded and not purchased: raise ValueError("'uploaded' and 'purchased' cannot both be False.") if purchased and uploaded: song_list = [] for chunk in self.songs_it...
python
{ "resource": "" }
q10507
MusicManager.songs_iter
train
def songs_iter(self, *, continuation_token=None, export_type=1): """Get a paged iterator of Music Library songs. Parameters: continuation_token (str, Optional): The token of the page to return. Default: Not sent to get first page. export_type (int, Optional): The type of tracks to return. 1 for all track...
python
{ "resource": "" }
q10508
GoogleMusicClient.login
train
def login(self, username, *, token=None): """Log in to Google Music. Parameters: username (str, Optional): Your Google Music username. Used for keeping stored OAuth tokens for multiple accounts separate. device_id (str, Optional): A mobile device ID or music manager uploader ID. Default: MAC address ...
python
{ "resource": "" }
q10509
GoogleMusicClient.switch_user
train
def switch_user(self, username='', *, token=None): """Log in to Google Music with a different user. Parameters: username (str, Optional): Your Google Music username. Used for keeping stored OAuth tokens for multiple accounts separate. token (dict, Optional): An OAuth token compatible with ``requests-oaut...
python
{ "resource": "" }
q10510
gen_tau
train
def gen_tau(S, K, delta): """The Robust part of the RSD, we precompute an array for speed """ pivot = floor(K/S) return [S/K * 1/d for d in range(1, pivot)] \ + [S/K * log(S/delta)] \ + [0 for d in range(pivot, K)]
python
{ "resource": "" }
q10511
gen_mu
train
def gen_mu(K, delta, c): """The Robust Soliton Distribution on the degree of transmitted blocks """ S = c * log(K/delta) * sqrt(K) tau = gen_tau(S, K, delta) rho = gen_rho(K) normalizer = sum(rho) + sum(tau) return [(rho[d] + tau[d])/normalizer for d in range(K)]
python
{ "resource": "" }
q10512
gen_rsd_cdf
train
def gen_rsd_cdf(K, delta, c): """The CDF of the RSD on block degree, precomputed for sampling speed""" mu = gen_mu(K, delta, c) return [sum(mu[:d+1]) for d in range(K)]
python
{ "resource": "" }
q10513
PRNG._get_next
train
def _get_next(self): """Executes the next iteration of the PRNG evolution process, and returns the result """ self.state = PRNG_A * self.state % PRNG_M return self.state
python
{ "resource": "" }
q10514
PRNG._sample_d
train
def _sample_d(self): """Samples degree given the precomputed distributions above and the linear PRNG output """ p = self._get_next() / PRNG_MAX_RAND for ix, v in enumerate(self.cdf): if v > p: return ix + 1 return ix + 1
python
{ "resource": "" }
q10515
PRNG.get_src_blocks
train
def get_src_blocks(self, seed=None): """Returns the indices of a set of `d` source blocks sampled from indices i = 1, ..., K-1 uniformly, where `d` is sampled from the RSD described above. """ if seed: self.state = seed blockseed = self.state d = sel...
python
{ "resource": "" }
q10516
run
train
def run(fn, blocksize, seed, c, delta): """Run the encoder until the channel is broken, signalling that the receiver has successfully reconstructed the file """ with open(fn, 'rb') as f: for block in encode.encoder(f, blocksize, seed, c, delta): sys.stdout.buffer.write(block)
python
{ "resource": "" }
q10517
MobileClient.album
train
def album(self, album_id, *, include_description=True, include_songs=True): """Get information about an album. Parameters: album_id (str): An album ID. Album IDs start with a 'B'. include_description (bool, Optional): Include description of the album in the returned dict. include_songs (bool, Optional): I...
python
{ "resource": "" }
q10518
MobileClient.artist
train
def artist( self, artist_id, *, include_albums=True, num_related_artists=5, num_top_tracks=5 ): """Get information about an artist. Parameters: artist_id (str): An artist ID. Artist IDs start with an 'A'. include_albums (bool, Optional): Include albums by the artist in returned dict. Default: ``True``...
python
{ "resource": "" }
q10519
MobileClient.browse_podcasts
train
def browse_podcasts(self, podcast_genre_id='JZCpodcasttopchartall'): """Get the podcasts for a genre from the Podcasts browse tab. Parameters: podcast_genre_id (str, Optional): A podcast genre ID as found in :meth:`browse_podcasts_genres`. Default: ``'JZCpodcasttopchartall'``. Returns: list: Podca...
python
{ "resource": "" }
q10520
MobileClient.browse_podcasts_genres
train
def browse_podcasts_genres(self): """Get the genres from the Podcasts browse tab dropdown. Returns: list: Genre groups that contain sub groups. """ response = self._call( mc_calls.PodcastBrowseHierarchy ) genres = response.body.get('groups', []) return genres
python
{ "resource": "" }
q10521
MobileClient.browse_stations
train
def browse_stations(self, station_category_id): """Get the stations for a category from Browse Stations. Parameters: station_category_id (str): A station category ID as found with :meth:`browse_stations_categories`. Returns: list: Station dicts. """ response = self._call( mc_calls.BrowseStatio...
python
{ "resource": "" }
q10522
MobileClient.browse_stations_categories
train
def browse_stations_categories(self): """Get the categories from Browse Stations. Returns: list: Station categories that can contain subcategories. """ response = self._call( mc_calls.BrowseStationCategories ) station_categories = response.body.get('root', {}).get('subcategories', []) return stat...
python
{ "resource": "" }
q10523
MobileClient.config
train
def config(self): """Get a listing of mobile client configuration settings.""" response = self._call( mc_calls.Config ) config_list = response.body.get('data', {}).get('entries', []) return config_list
python
{ "resource": "" }
q10524
MobileClient.devices
train
def devices(self): """Get a listing of devices registered to the Google Music account.""" response = self._call( mc_calls.DeviceManagementInfo ) registered_devices = response.body.get('data', {}).get('items', []) return registered_devices
python
{ "resource": "" }
q10525
MobileClient.explore_genres
train
def explore_genres(self, parent_genre_id=None): """Get a listing of song genres. Parameters: parent_genre_id (str, Optional): A genre ID. If given, a listing of this genre's sub-genres is returned. Returns: list: Genre dicts. """ response = self._call( mc_calls.ExploreGenres, parent_genre_i...
python
{ "resource": "" }
q10526
MobileClient.explore_tabs
train
def explore_tabs(self, *, num_items=100, genre_id=None): """Get a listing of explore tabs. Parameters: num_items (int, Optional): Number of items per tab to return. Default: ``100`` genre_id (genre_id, Optional): Genre ID from :meth:`explore_genres` to explore. Default: ``None``. Returns: dict:...
python
{ "resource": "" }
q10527
MobileClient.listen_now_dismissed_items
train
def listen_now_dismissed_items(self): """Get a listing of items dismissed from Listen Now tab.""" response = self._call( mc_calls.ListenNowGetDismissedItems ) dismissed_items = response.body.get('items', []) return dismissed_items
python
{ "resource": "" }
q10528
MobileClient.listen_now_items
train
def listen_now_items(self): """Get a listing of Listen Now items. Note: This does not include situations; use the :meth:`situations` method instead. Returns: dict: With ``albums`` and ``stations`` keys of listen now items. """ response = self._call( mc_calls.ListenNowGetListenNowItems ) lis...
python
{ "resource": "" }
q10529
MobileClient.playlist_song
train
def playlist_song(self, playlist_song_id): """Get information about a playlist song. Note: This returns the playlist entry information only. For full song metadata, use :meth:`song` with the ``'trackId'`` field. Parameters: playlist_song_id (str): A playlist song ID. Returns: dict: Playlist so...
python
{ "resource": "" }
q10530
MobileClient.playlist_song_add
train
def playlist_song_add( self, song, playlist, *, after=None, before=None, index=None, position=None ): """Add a song to a playlist. Note: * Provide no optional arguments to add to end. * Provide playlist song dicts for ``after`` and/or ``before``. * Provide a zero-based ``index``. * Pro...
python
{ "resource": "" }
q10531
MobileClient.playlist_songs_add
train
def playlist_songs_add( self, songs, playlist, *, after=None, before=None, index=None, position=None ): """Add songs to a playlist. Note: * Provide no optional arguments to add to end. * Provide playlist song dicts for ``after`` and/or ``before``. * Provide a zero-based ``index``. * Pr...
python
{ "resource": "" }
q10532
MobileClient.playlist_song_delete
train
def playlist_song_delete(self, playlist_song): """Delete song from playlist. Parameters: playlist_song (str): A playlist song dict. Returns: dict: Playlist dict including songs. """ self.playlist_songs_delete([playlist_song]) return self.playlist(playlist_song['playlistId'], include_songs=True)
python
{ "resource": "" }
q10533
MobileClient.playlist_songs_delete
train
def playlist_songs_delete(self, playlist_songs): """Delete songs from playlist. Parameters: playlist_songs (list): A list of playlist song dicts. Returns: dict: Playlist dict including songs. """ if not more_itertools.all_equal( playlist_song['playlistId'] for playlist_song in playlist_songs ...
python
{ "resource": "" }
q10534
MobileClient.playlist_song_move
train
def playlist_song_move( self, playlist_song, *, after=None, before=None, index=None, position=None ): """Move a song in a playlist. Note: * Provide no optional arguments to move to end. * Provide playlist song dicts for ``after`` and/or ``before``. * Provide a zero-based ``index``. * Pro...
python
{ "resource": "" }
q10535
MobileClient.playlist_songs_move
train
def playlist_songs_move( self, playlist_songs, *, after=None, before=None, index=None, position=None ): """Move songs in a playlist. Note: * Provide no optional arguments to move to end. * Provide playlist song dicts for ``after`` and/or ``before``. * Provide a zero-based ``index``. * Pr...
python
{ "resource": "" }
q10536
MobileClient.playlist_songs
train
def playlist_songs(self, playlist): """Get a listing of songs from a playlist. Paramters: playlist (dict): A playlist dict. Returns: list: Playlist song dicts. """ playlist_type = playlist.get('type') playlist_song_list = [] if playlist_type in ('USER_GENERATED', None): start_token = None ...
python
{ "resource": "" }
q10537
MobileClient.playlist
train
def playlist(self, playlist_id, *, include_songs=False): """Get information about a playlist. Parameters: playlist_id (str): A playlist ID. include_songs (bool, Optional): Include songs from the playlist in the returned dict. Default: ``False`` Returns: dict: Playlist information. """ play...
python
{ "resource": "" }
q10538
MobileClient.playlist_create
train
def playlist_create( self, name, description='', *, make_public=False, songs=None ): """Create a playlist. Parameters: name (str): Name to give the playlist. description (str): Description to give the playlist. make_public (bool, Optional): If ``True`` and account has a subscription, make...
python
{ "resource": "" }
q10539
MobileClient.playlist_subscribe
train
def playlist_subscribe(self, playlist): """Subscribe to a public playlist. Parameters: playlist (dict): A public playlist dict. Returns: dict: Playlist information. """ mutation = mc_calls.PlaylistBatch.create( playlist['name'], playlist['description'], 'SHARED', owner_name=playlist.get('...
python
{ "resource": "" }
q10540
MobileClient.playlists
train
def playlists(self, *, include_songs=False): """Get a listing of library playlists. Parameters: include_songs (bool, Optional): Include songs in the returned playlist dicts. Default: ``False``. Returns: list: A list of playlist dicts. """ playlist_list = [] for chunk in self.playlists_iter(page...
python
{ "resource": "" }
q10541
MobileClient.playlists_iter
train
def playlists_iter(self, *, start_token=None, page_size=250): """Get a paged iterator of library playlists. Parameters: start_token (str): The token of the page to return. Default: Not sent to get first page. page_size (int, Optional): The maximum number of results per returned page. Max allowed is `...
python
{ "resource": "" }
q10542
MobileClient.podcast
train
def podcast(self, podcast_series_id, *, max_episodes=50): """Get information about a podcast series. Parameters: podcast_series_id (str): A podcast series ID. max_episodes (int, Optional): Include up to given number of episodes in returned dict. Default: ``50`` Returns: dict: Podcast series informa...
python
{ "resource": "" }
q10543
MobileClient.podcasts
train
def podcasts(self, *, device_id=None): """Get a listing of subsribed podcast series. Paramaters: device_id (str, Optional): A mobile device ID. Default: Use ``device_id`` of the :class:`MobileClient` instance. Returns: list: Podcast series dict. """ if device_id is None: device_id = self.devic...
python
{ "resource": "" }
q10544
MobileClient.podcasts_iter
train
def podcasts_iter(self, *, device_id=None, page_size=250): """Get a paged iterator of subscribed podcast series. Parameters: device_id (str, Optional): A mobile device ID. Default: Use ``device_id`` of the :class:`MobileClient` instance. page_size (int, Optional): The maximum number of results per return...
python
{ "resource": "" }
q10545
MobileClient.podcast_episode
train
def podcast_episode(self, podcast_episode_id): """Get information about a podcast_episode. Parameters: podcast_episode_id (str): A podcast episode ID. Returns: dict: Podcast episode information. """ response = self._call( mc_calls.PodcastFetchEpisode, podcast_episode_id ) podcast_episode_in...
python
{ "resource": "" }
q10546
MobileClient.podcast_episodes
train
def podcast_episodes(self, *, device_id=None): """Get a listing of podcast episodes for all subscribed podcasts. Paramaters: device_id (str, Optional): A mobile device ID. Default: Use ``device_id`` of the :class:`MobileClient` instance. Returns: list: Podcast episode dicts. """ if device_id is N...
python
{ "resource": "" }
q10547
MobileClient.podcast_episodes_iter
train
def podcast_episodes_iter(self, *, device_id=None, page_size=250): """Get a paged iterator of podcast episode for all subscribed podcasts. Parameters: device_id (str, Optional): A mobile device ID. Default: Use ``device_id`` of the :class:`MobileClient` instance. page_size (int, Optional): The maximum nu...
python
{ "resource": "" }
q10548
MobileClient.search
train
def search(self, query, *, max_results=100, **kwargs): """Search Google Music and library for content. Parameters: query (str): Search text. max_results (int, Optional): Maximum number of results per type per location to retrieve. I.e up to 100 Google and 100 library for a total of 200 for the defaul...
python
{ "resource": "" }
q10549
MobileClient.search_suggestion
train
def search_suggestion(self, query): """Get search query suggestions for query. Parameters: query (str): Search text. Returns: list: Suggested query strings. """ response = self._call( mc_calls.QuerySuggestion, query ) suggested_queries = response.body.get('suggested_queries', []) return ...
python
{ "resource": "" }
q10550
MobileClient.situations
train
def situations(self, *, tz_offset=None): """Get a listing of situations. Parameters: tz_offset (int, Optional): A time zone offset from UTC in seconds. """ response = self._call( mc_calls.ListenNowSituations, tz_offset ) situation_list = response.body.get('situations', []) return situation_lis...
python
{ "resource": "" }
q10551
MobileClient.song
train
def song(self, song_id): """Get information about a song. Parameters: song_id (str): A song ID. Returns: dict: Song information. """ if song_id.startswith('T'): song_info = self._call( mc_calls.FetchTrack, song_id ).body else: song_info = next( ( song for song in self...
python
{ "resource": "" }
q10552
MobileClient.songs_add
train
def songs_add(self, songs): """Add store songs to your library. Parameters: songs (list): A list of store song dicts. Returns: list: Songs' library IDs. """ mutations = [mc_calls.TrackBatch.add(song) for song in songs] response = self._call( mc_calls.TrackBatch, mutations ) success_ids =...
python
{ "resource": "" }
q10553
MobileClient.songs_delete
train
def songs_delete(self, songs): """Delete songs from library. Parameters: song (list): A list of song dicts. Returns: list: Successfully deleted song IDs. """ mutations = [mc_calls.TrackBatch.delete(song['id']) for song in songs] response = self._call( mc_calls.TrackBatch, mutations ) suc...
python
{ "resource": "" }
q10554
MobileClient.song_play
train
def song_play(self, song): """Add play to song play count. Parameters: song (dict): A song dict. Returns: bool: ``True`` if successful, ``False`` if not. """ if 'storeId' in song: song_id = song['storeId'] elif 'trackId' in song: song_id = song['trackId'] else: song_id = song['id'] so...
python
{ "resource": "" }
q10555
MobileClient.song_rate
train
def song_rate(self, song, rating): """Rate song. Parameters: song (dict): A song dict. rating (int): 0 (not rated), 1 (thumbs down), or 5 (thumbs up). Returns: bool: ``True`` if successful, ``False`` if not. """ if 'storeId' in song: song_id = song['storeId'] elif 'trackId' in song: song_i...
python
{ "resource": "" }
q10556
MobileClient.songs
train
def songs(self): """Get a listing of library songs. Returns: list: Song dicts. """ song_list = [] for chunk in self.songs_iter(page_size=49995): song_list.extend(chunk) return song_list
python
{ "resource": "" }
q10557
MobileClient.songs_iter
train
def songs_iter(self, *, page_size=250): """Get a paged iterator of library songs. Parameters: page_size (int, Optional): The maximum number of results per returned page. Max allowed is ``49995``. Default: ``250`` Yields: list: Song dicts. """ start_token = None while True: response = se...
python
{ "resource": "" }
q10558
MobileClient.station
train
def station(self, station_id, *, num_songs=25, recently_played=None): """Get information about a station. Parameters: station_id (str): A station ID. Use 'IFL' for I'm Feeling Lucky. num_songs (int, Optional): The maximum number of songs to return from the station. Default: ``25`` recently_played (lis...
python
{ "resource": "" }
q10559
MobileClient.station_feed
train
def station_feed(self, *, num_songs=25, num_stations=4): """Generate stations. Note: A Google Music subscription is required. Parameters: num_songs (int, Optional): The total number of songs to return. Default: ``25`` num_stations (int, Optional): The number of stations to return when no station_infos ...
python
{ "resource": "" }
q10560
MobileClient.station_songs
train
def station_songs(self, station, *, num_songs=25, recently_played=None): """Get a listing of songs from a station. Parameters: station (str): A station dict. num_songs (int, Optional): The maximum number of songs to return from the station. Default: ``25`` recently_played (list, Optional): A list of dicts...
python
{ "resource": "" }
q10561
MobileClient.stations
train
def stations(self, *, generated=True, library=True): """Get a listing of library stations. The listing can contain stations added to the library and generated from the library. Parameters: generated (bool, Optional): Include generated stations. Default: True library (bool, Optional): Include library s...
python
{ "resource": "" }
q10562
MobileClient.stations_iter
train
def stations_iter(self, *, page_size=250): """Get a paged iterator of library stations. Parameters: page_size (int, Optional): The maximum number of results per returned page. Max allowed is ``49995``. Default: ``250`` Yields: list: Station dicts. """ start_token = None while True: resp...
python
{ "resource": "" }
q10563
MobileClient.stream
train
def stream(self, item, *, device_id=None, quality='hi', session_token=None): """Get MP3 stream of a podcast episode, library song, station_song, or store song. Note: Streaming requires a ``device_id`` from a valid, linked mobile device. Parameters: item (str): A podcast episode, library song, station_song...
python
{ "resource": "" }
q10564
MobileClient.stream_url
train
def stream_url(self, item, *, device_id=None, quality='hi', session_token=None): """Get a URL to stream a podcast episode, library song, station_song, or store song. Note: Streaming requires a ``device_id`` from a valid, linked mobile device. Parameters: item (str): A podcast episode, library song, statio...
python
{ "resource": "" }
q10565
MobileClient.thumbs_up_songs
train
def thumbs_up_songs(self, *, library=True, store=True): """Get a listing of 'Thumbs Up' store songs. Parameters: library (bool, Optional): Include 'Thumbs Up' songs from library. Default: True generated (bool, Optional): Include 'Thumbs Up' songs from store. Default: True Returns: list: Dicts o...
python
{ "resource": "" }
q10566
MobileClient.top_charts
train
def top_charts(self): """Get a listing of the default top charts.""" response = self._call(mc_calls.BrowseTopChart) top_charts = response.body return top_charts
python
{ "resource": "" }
q10567
MobileClient.top_charts_for_genre
train
def top_charts_for_genre(self, genre_id): """Get a listing of top charts for a top chart genre. Parameters: genre_id (str): A top chart genre ID as found with :meth:`top_charts_genres`. """ response = self._call(mc_calls.BrowseTopChartForGenre, genre_id) top_chart_for_genre = response.body return top_...
python
{ "resource": "" }
q10568
MobileClient.top_charts_genres
train
def top_charts_genres(self): """Get a listing of genres from the browse top charts tab.""" response = self._call(mc_calls.BrowseTopChartGenres) top_chart_genres = response.body.get('genres', []) return top_chart_genres
python
{ "resource": "" }
q10569
run
train
def run(stream=sys.stdin.buffer): """Reads from stream, applying the LT decoding algorithm to incoming encoded blocks until sufficiently many blocks have been received to reconstruct the entire file. """ payload = decode.decode(stream) sys.stdout.write(payload.decode('utf8'))
python
{ "resource": "" }
q10570
_split_file
train
def _split_file(f, blocksize): """Block file byte contents into blocksize chunks, padding last one if necessary """ f_bytes = f.read() blocks = [int.from_bytes(f_bytes[i:i+blocksize].ljust(blocksize, b'0'), sys.byteorder) for i in range(0, len(f_bytes), blocksize)] return len(f_bytes),...
python
{ "resource": "" }
q10571
encoder
train
def encoder(f, blocksize, seed=None, c=sampler.DEFAULT_C, delta=sampler.DEFAULT_DELTA): """Generates an infinite sequence of blocks to transmit to the receiver """ # Generate seed if not provided if seed is None: seed = randint(0, 1 << 31 - 1) # get file blocks filesize, blocks = _...
python
{ "resource": "" }
q10572
_read_block
train
def _read_block(blocksize, stream): """Read block data from network into integer type """ blockdata = stream.read(blocksize) return int.from_bytes(blockdata, 'big')
python
{ "resource": "" }
q10573
read_blocks
train
def read_blocks(stream): """Generate parsed blocks from input stream """ while True: header = _read_header(stream) block = _read_block(header[1], stream) yield (header, block)
python
{ "resource": "" }
q10574
BlockGraph.add_block
train
def add_block(self, nodes, data): """Adds a new check node and edges between that node and all source nodes it connects, resolving all message passes that become possible as a result. """ # We can eliminate this source node if len(nodes) == 1: to_eliminate = ...
python
{ "resource": "" }
q10575
BlockGraph.eliminate
train
def eliminate(self, node, data): """Resolves a source node, passing the message to all associated checks """ # Cache resolved value self.eliminated[node] = data others = self.checks[node] del self.checks[node] # Pass messages to all associated checks for...
python
{ "resource": "" }
q10576
mobileclient
train
def mobileclient(username=None, device_id=None, *, token=None, locale='en_US'): """Create and authenticate a Google Music mobile client. >>> import google_music >>> mc = google_music.mobileclient('username') Parameters: username (str, Optional): Your Google Music username. This is used to store OAuth credent...
python
{ "resource": "" }
q10577
_dendropy_to_dataframe
train
def _dendropy_to_dataframe( tree, add_node_labels=True, use_uids=True): """Convert Dendropy tree to Pandas dataframe.""" # Maximum distance from root. tree.max_distance_from_root() # Initialize the data object. idx = [] data = { 'type': [], 'id': [], 'parent'...
python
{ "resource": "" }
q10578
_read
train
def _read( filename=None, data=None, schema=None, add_node_labels=True, use_uids=True ): """Read a phylogenetic tree into a phylopandas.DataFrame. The resulting DataFrame has the following columns: - name: label for each taxa or node. - id: unique id (created by phylopan...
python
{ "resource": "" }
q10579
pandas_df_to_biopython_seqrecord
train
def pandas_df_to_biopython_seqrecord( df, id_col='uid', sequence_col='sequence', extra_data=None, alphabet=None, ): """Convert pandas dataframe to biopython seqrecord for easy writing. Parameters ---------- df : Dataframe Pandas dataframe to convert id_col : str ...
python
{ "resource": "" }
q10580
pandas_series_to_biopython_seqrecord
train
def pandas_series_to_biopython_seqrecord( series, id_col='uid', sequence_col='sequence', extra_data=None, alphabet=None ): """Convert pandas series to biopython seqrecord for easy writing. Parameters ---------- series : Series Pandas series to convert id_col : str ...
python
{ "resource": "" }
q10581
_write
train
def _write( data, filename=None, schema='fasta', id_col='uid', sequence_col='sequence', extra_data=None, alphabet=None, **kwargs): """General write function. Write phylopanda data to biopython format. Parameters ---------- filename : str File to write string to. ...
python
{ "resource": "" }
q10582
_read
train
def _read( filename, schema, seq_label='sequence', alphabet=None, use_uids=True, **kwargs): """Use BioPython's sequence parsing module to convert any file format to a Pandas DataFrame. The resulting DataFrame has the following columns: - name - id - descripti...
python
{ "resource": "" }
q10583
read_blast_xml
train
def read_blast_xml(filename, **kwargs): """Read BLAST XML format.""" # Read file. with open(filename, 'r') as f: blast_record = NCBIXML.read(f) # Prepare DataFrame fields. data = {'accession': [], 'hit_def': [], 'hit_id': [], 'title': [], 'len...
python
{ "resource": "" }
q10584
_pandas_df_to_dendropy_tree
train
def _pandas_df_to_dendropy_tree( df, taxon_col='uid', taxon_annotations=[], node_col='uid', node_annotations=[], branch_lengths=True, ): """Turn a phylopandas dataframe into a dendropy tree. Parameters ---------- df : DataFrame DataFrame containing tree data. ta...
python
{ "resource": "" }
q10585
_write
train
def _write( df, filename=None, schema='newick', taxon_col='uid', taxon_annotations=[], node_col='uid', node_annotations=[], branch_lengths=True, **kwargs ): """Write a phylopandas tree DataFrame to various formats. Parameters ---------- df : DataFrame Dat...
python
{ "resource": "" }
q10586
get_random_id
train
def get_random_id(length): """Generate a random, alpha-numerical id.""" alphabet = string.ascii_uppercase + string.ascii_lowercase + string.digits return ''.join(random.choice(alphabet) for _ in range(length))
python
{ "resource": "" }
q10587
PyGreen.set_folder
train
def set_folder(self, folder): """ Sets the folder where the files to serve are located. """ self.folder = folder self.templates.directories[0] = folder self.app.root_path = folder
python
{ "resource": "" }
q10588
PyGreen.run
train
def run(self, host='0.0.0.0', port=8080): """ Launch a development web server. """ waitress.serve(self.app, host=host, port=port)
python
{ "resource": "" }
q10589
PyGreen.get
train
def get(self, path): """ Get the content of a file, indentified by its path relative to the folder configured in PyGreen. If the file extension is one of the extensions that should be processed through Mako, it will be processed. """ data = self.app.test_client().get("/%s...
python
{ "resource": "" }
q10590
PyGreen.gen_static
train
def gen_static(self, output_folder): """ Generates a complete static version of the web site. It will stored in output_folder. """ files = [] for l in self.file_listers: files += l() for f in files: _logger.info("generating %s" % f) ...
python
{ "resource": "" }
q10591
PyGreen.cli
train
def cli(self, cmd_args=None): """ The command line interface of PyGreen. """ logging.basicConfig(level=logging.INFO, format='%(message)s') parser = argparse.ArgumentParser(description='PyGreen, micro web framework/static web site generator') subparsers = parser.add_subpa...
python
{ "resource": "" }
q10592
WSGIMimeRender
train
def WSGIMimeRender(*args, **kwargs): ''' A wrapper for _WSGIMimeRender that wrapps the inner callable with wsgi_wrap first. ''' def wrapper(*args2, **kwargs2): # take the function def wrapped(f): return _WSGIMimeRender(*args, **kwargs)(*args2, **kwargs2)(wsgi_wrap(f)) ...
python
{ "resource": "" }
q10593
URI.relative
train
def relative(self): """Identify if this URI is relative to some "current context". For example, if the protocol is missing, it's protocol-relative. If the host is missing, it's host-relative, etc. """ scheme = self.scheme if not scheme: return True return scheme.is_relative(self)
python
{ "resource": "" }
q10594
URI.resolve
train
def resolve(self, uri=None, **parts): """Attempt to resolve a new URI given an updated URI, partial or complete.""" if uri: result = self.__class__(urljoin(str(self), str(uri))) else: result = self.__class__(self) for part, value in parts.items(): if part not in self.__all_parts__: raise Type...
python
{ "resource": "" }
q10595
JalaliDate.replace
train
def replace(self, year=None, month=None, day=None): """ Replaces the given arguments on this instance, and return a new instance. :param year: :param month: :param day: :return: A :py:class:`khayyam.JalaliDate` with the same attributes, except for those attri...
python
{ "resource": "" }
q10596
JalaliDate.todate
train
def todate(self): """ Calculates the corresponding day in the gregorian calendar. this is the main use case of this library. :return: Corresponding date in gregorian calendar. :rtype: :py:class:`datetime.date` """ arr = get_gregorian_date_from_julian_day(self.tojulianday...
python
{ "resource": "" }
q10597
JalaliDatetime.date
train
def date(self): """ Return date object with same year, month and day. :rtype: :py:class:`khayyam.JalaliDate` """ return khayyam.JalaliDate(self.year, self.month, self.day)
python
{ "resource": "" }
q10598
levinson_1d
train
def levinson_1d(r, order): """Levinson-Durbin recursion, to efficiently solve symmetric linear systems with toeplitz structure. Parameters --------- r : array-like input array to invert (since the matrix is symmetric Toeplitz, the corresponding pxp matrix is defined by p items only)...
python
{ "resource": "" }
q10599
acorr_lpc
train
def acorr_lpc(x, axis=-1): """Compute autocorrelation of x along the given axis. This compute the biased autocorrelation estimator (divided by the size of input signal) Notes ----- The reason why we do not use acorr directly is for speed issue.""" if not np.isrealobj(x): raise ...
python
{ "resource": "" }