task
stringclasses
5 values
input
stringlengths
89
339
functional_group
### Instruction: Does the molecule contain a halide group? CCCC[C@@H](C)[NH2+]C[C@H]1CSc2ccccc21 ### Response: No
fragment_assembly
### Instruction: Assemble these two molecular fragments into a single molecule. Fragment 1: [1*]C(=O)[C@H]([4*])C Fragment 2: [9*]n1nnnc1S[11*] ### Response: C[C@@H](Sc1nnnn1-c1ccc(Cl)cc1)C(=O)NCC(=O)Nc1ccc(F)c(F)c1F
fragment_assembly
### Instruction: Assemble these two molecular fragments into a single molecule. Fragment 1: [4*]Cc1cccc(N[5*])c1 Fragment 2: [1*]C(=O)[C@@H]1CCCO1 ### Response: O=C(Nc1cccc(CNc2ccc(Cl)cn2)c1)[C@@H]1CCCO1
ring_counting
### Instruction: Count the six-membered rings in the following molecule. CC(C)N(C)S(=O)(=O)c1cccc(C(=O)Nc2cnn(C(C)(C)C)c2)c1 ### Response: 1
fragment_assembly
### Instruction: Assemble these two molecular fragments into a single molecule. Fragment 1: [5*]Nc1nccs1 Fragment 2: [3*]OCC ### Response: CCO[C@H]1C[C@@H](Nc2nccs2)C12CCCCC2
ring_counting
### Instruction: Count the six-membered rings in the following molecule. C[NH+](C)C1([C@@H](N)c2cnccn2)CCCCCC1 ### Response: 1
canonicalization
### Instruction: Canonicalize the following SMILES string. C1[C@@]2(CCO1)CN(C1CC[NH+](CC1)Cc1cccnc1)C(CC2)=O ### Response: O=C1CC[C@]2(CCOC2)CN1C1CC[NH+](Cc2cccnc2)CC1
chain_length
### Instruction: What is the length of the longest acyclic carbon chain in the molecule? C[C@@H](O)C(=O)N1CCN(CC(C)(C)S(C)(=O)=O)CC1 ### Response: 3
ring_counting
### Instruction: Count the six-membered rings in the following molecule. Cc1ccc2nc(SCc3nnc(-c4cccs4)o3)[nH]c2c1 ### Response: 1
ring_counting
### Instruction: Count the five-membered rings in the following molecule. C[NH+]1CCN(C(=O)Nc2ccccc2OC(F)(F)F)[C@H](c2ccccc2)C1 ### Response: 0
canonicalization
### Instruction: Canonicalize the following SMILES string. s1ccc(c1S(=O)(=O)N(C)CC(O)(C)C)Br ### Response: CN(CC(C)(C)O)S(=O)(=O)c1sccc1Br
canonicalization
### Instruction: Canonicalize the following SMILES string. C1[C@H]([C@@H]([NH2+]C)C(OC)OC)C[C@]2(OC1)CCOC2 ### Response: C[NH2+][C@@H](C(OC)OC)[C@H]1CCO[C@]2(CCOC2)C1
chain_length
### Instruction: What is the length of the longest acyclic carbon chain in the molecule? CC(C)[NH+]1CCC[C@H](CNC(=O)c2cc(C3CCCCC3)no2)C1 ### Response: 3
fragment_assembly
### Instruction: Assemble these two molecular fragments into a single molecule. Fragment 1: [5*]N(C)C Fragment 2: [1*]C(=O)c1cc(F)cc2[nH]cnc12 ### Response: CN(C)c1ccc(CNC(=O)c2cc(F)cc3[nH]cnc23)cc1
chain_length
### Instruction: What is the length of the longest acyclic carbon chain in the molecule? CS[C@@H](C)c1cccc(NC(=O)NCCc2sc(C)nc2C)c1 ### Response: 2
fragment_assembly
### Instruction: Assemble these two molecular fragments into a single molecule. Fragment 1: [7*]C(C)C Fragment 2: [4*][C@@H](C)c1nc([14*])cs1 ### Response: CC(C)=CCC[C@H](C)[NH2+][C@@H](C)c1nc(-c2ccncc2)cs1
ring_counting
### Instruction: Count the six-membered rings in the following molecule. Cc1ccnc(C[C@@H](C)N(C)C(=O)c2ccc(C)c(NC(=O)C3CC3)c2)c1 ### Response: 2
canonicalization
### Instruction: Canonicalize the following SMILES string. c1cccc2OCC(C(=O)NCc3c(CO)cccc3)=Cc12 ### Response: O=C(NCc1ccccc1CO)C1=Cc2ccccc2OC1
chain_length
### Instruction: What is the length of the longest acyclic carbon chain in the molecule? COC(=O)C[C@@H](C)NC(=O)C(F)(F)c1ccccc1 ### Response: 4
ring_counting
### Instruction: Count the six-membered rings in the following molecule. Cc1cc(F)cc2c(NCCCOCC(F)(F)F)c(C#N)cnc12 ### Response: 2
functional_group
### Instruction: Does the molecule contain a halide group? Cc1ccnc2c1nc(CCl)n2-c1ccsc1 ### Response: Yes
canonicalization
### Instruction: Canonicalize the following SMILES string. c1(Cl)c(n(nc1C(=O)N1C[C@@H]2CC[C@@H]([NH+](C2)CC2CCC2)C1)C)C ### Response: Cc1c(Cl)c(C(=O)N2C[C@@H]3CC[C@H](C2)[NH+](CC2CCC2)C3)nn1C
chain_length
### Instruction: What is the length of the longest acyclic carbon chain in the molecule? CN(CC1CC[NH+](C)CC1)C(=O)NCC(=O)N1CCc2ccccc2C1 ### Response: 2
canonicalization
### Instruction: Canonicalize the following SMILES string. C([C@H]([NH+]1CCCC1)c1ccccc1OC)NC(=O)Cc1c[nH]c2c1cccc2 ### Response: COc1ccccc1[C@H](CNC(=O)Cc1c[nH]c2ccccc12)[NH+]1CCCC1
chain_length
### Instruction: What is the length of the longest acyclic carbon chain in the molecule? C[C@@H](NC(=O)N(C)Cc1cccc2ccccc12)[C@@H]1CCCO1 ### Response: 2
ring_counting
### Instruction: Count the six-membered rings in the following molecule. CCC(O)(CC)CNC(=O)c1cccc(SCC#N)c1 ### Response: 1
chain_length
### Instruction: What is the length of the longest acyclic carbon chain in the molecule? CC[C@H](C)NC(=O)C[NH2+][C@H](C)c1c(C)noc1C ### Response: 4
ring_counting
### Instruction: Count the six-membered rings in the following molecule. Cc1ccc(C(=O)Nc2cccc3c2C(=O)N(c2ccccc2)C3=O)cc1[N+](=O)[O-] ### Response: 3
chain_length
### Instruction: What is the length of the longest acyclic carbon chain in the molecule? CCNS(=O)(=O)[C@H]1CCN(CN2C(=O)C[C@H]2c2ccccc2)C1 ### Response: 2
ring_counting
### Instruction: Count the five-membered rings in the following molecule. C#CCOc1ccccc1C[NH+](C)CC(=O)Nc1c(C)nn(C)c1C ### Response: 1
fragment_assembly
### Instruction: Assemble these two molecular fragments into a single molecule. Fragment 1: [4*]C[C@H]([4*])c1cccc(F)c1 Fragment 2: [5*]NC[C@@H]1CCS(=O)(=O)C1 ### Response: C[NH+](C)[C@@H](CNC(=O)NC[C@@H]1CCS(=O)(=O)C1)c1cccc(F)c1
ring_counting
### Instruction: Count the five-membered rings in the following molecule. CCCN(CC(C)(C)C[NH3+])[C@H]1CCCc2ccccc21 ### Response: 0
canonicalization
### Instruction: Canonicalize the following SMILES string. C1CCCC(NC(=O)c2cc3CCSc3s2)CC1 ### Response: O=C(NC1CCCCCC1)c1cc2c(s1)SCC2
functional_group
### Instruction: Does the molecule contain a ketone group? COc1ccc(C(=O)CCC(=O)N2C[C@@H](C)OC[C@@H]2C)cc1F ### Response: Yes
canonicalization
### Instruction: Canonicalize the following SMILES string. N([C@]1(C[C@@H](CC1)n1ncc(c1)C)C(=O)OC)CC ### Response: CCN[C@]1(C(=O)OC)CC[C@@H](n2cc(C)cn2)C1
canonicalization
### Instruction: Canonicalize the following SMILES string. c1(C)onc(c1Cc1sc2nnc(-c3ccsc3)n2n1)C ### Response: Cc1noc(C)c1Cc1nn2c(-c3ccsc3)nnc2s1
fragment_assembly
### Instruction: Assemble these two molecular fragments into a single molecule. Fragment 1: [5*]NC1CCCCC1 Fragment 2: [1*]C(=O)CCN[5*] ### Response: O=C(CCNC(=O)C1=Cc2cc(F)ccc2OC1)NC1CCCCC1
fragment_assembly
### Instruction: Assemble these two molecular fragments into a single molecule. Fragment 1: [5*]Nc1ccc2ccccc2c1 Fragment 2: [12*]S(C)(=O)=O ### Response: CS(=O)(=O)N1CCC(C(=O)Nc2ccc3ccccc3c2)CC1
fragment_assembly
### Instruction: Assemble these two molecular fragments into a single molecule. Fragment 1: [5*]N(C)[C@@H]1CCc2ccccc21 Fragment 2: [12*]S(=O)(=O)c1ccc([N+](=O)[O-])cc1F ### Response: CN([C@@H]1CCc2ccccc21)S(=O)(=O)c1ccc([N+](=O)[O-])cc1F
functional_group
### Instruction: Does the molecule contain a ester group? CC(C)[C@H]1CC[C@@H]([NH3+])[C@H](Cc2ccc([N+](=O)[O-])c(F)c2)C1 ### Response: No
canonicalization
### Instruction: Canonicalize the following SMILES string. O=C(c1cccc2ncccc12)Nc1c(Cl)cc2OCCOc2c1 ### Response: O=C(Nc1cc2c(cc1Cl)OCCO2)c1cccc2ncccc12
ring_counting
### Instruction: Count the six-membered rings in the following molecule. Cc1ccc(C(=O)N2CCN(C[C@@H](C)O)CC2)cc1S(C)(=O)=O ### Response: 2
functional_group
### Instruction: Does the molecule contain a thiol group? Cc1cccc(C(=O)N[C@@H](C)C(=O)N2CC[C@@H](OCCC(C)C)C2)c1 ### Response: No
canonicalization
### Instruction: Canonicalize the following SMILES string. n1(CCNC(CNC(=O)c2cc(c(F)cc2)F)=O)c(C)nc2ccccc12 ### Response: Cc1nc2ccccc2n1CCNC(=O)CNC(=O)c1ccc(F)c(F)c1
canonicalization
### Instruction: Canonicalize the following SMILES string. N1(CCCCCC1=O)CCCNC(=O)Nc1c(cc(C#C)cc1F)F ### Response: C#Cc1cc(F)c(NC(=O)NCCCN2CCCCCC2=O)c(F)c1
functional_group
### Instruction: Does the molecule contain a amide group? O=C1N[C@H](c2cccc(Oc3ccccc3)c2)Oc2ccccc21 ### Response: Yes
fragment_assembly
### Instruction: Assemble these two molecular fragments into a single molecule. Fragment 1: [5*]N1c2ccccc2[C@@H](C(N)=O)C[C@@H]1C Fragment 2: [4*]Cc1cc(=O)oc2cc(C)ccc12 ### Response: Cc1ccc2c(CN3c4ccccc4[C@@H](C(N)=O)C[C@@H]3C)cc(=O)oc2c1
fragment_assembly
### Instruction: Assemble these two molecular fragments into a single molecule. Fragment 1: [5*]N([5*])C1CCCCC1 Fragment 2: [4*]Cc1nc([14*])no1 ### Response: COc1ccc(-c2noc(CN(C(=O)c3ccc(C)c([N+](=O)[O-])c3)C3CCCCC3)n2)cc1
chain_length
### Instruction: What is the length of the longest acyclic carbon chain in the molecule? O=S(=O)([O-])c1ccc(Cl)c2cccnc12 ### Response: 0
canonicalization
### Instruction: Canonicalize the following SMILES string. c1(CO)ncoc1C[C@@H]1OCCC1 ### Response: OCc1ncoc1C[C@H]1CCCO1
canonicalization
### Instruction: Canonicalize the following SMILES string. c1(ncnc(N2C[C@H]([C@@H](C2)C)C)c1N)OC(C)C ### Response: CC(C)Oc1ncnc(N2C[C@@H](C)[C@H](C)C2)c1N
functional_group
### Instruction: Does the molecule contain a ester group? Cc1ccc(NC(=O)CCc2cnn(C)c2C)cc1S(C)(=O)=O ### Response: No
functional_group
### Instruction: Does the molecule contain a sulfonyl group? CCn1ccnc(NCCN(C)C(=O)OC(C)(C)C)c1=O ### Response: No
ring_counting
### Instruction: Count the six-membered rings in the following molecule. CCCCNC(=O)CCc1c(C)nc2c3ccccc3nn2c1C ### Response: 2
canonicalization
### Instruction: Canonicalize the following SMILES string. C(N1CCN(c2[nH+]cccc2)CC1)(CC[C@H]1CCCN(C(C2CCC(N(N=2)C)=O)=O)C1)=O ### Response: CN1N=C(C(=O)N2CCC[C@H](CCC(=O)N3CCN(c4cccc[nH+]4)CC3)C2)CCC1=O
functional_group
### Instruction: Does the molecule contain a carboxyl group? CCOc1ccccc1C(=O)NCCS(=O)(=O)/N=c1/cccc[nH]1 ### Response: No
chain_length
### Instruction: What is the length of the longest acyclic carbon chain in the molecule? Cc1ccc(S(=O)(=O)/N=C(\[O-])[C@H]2C[C@H]2c2cnn(C)c2)s1 ### Response: 1
chain_length
### Instruction: What is the length of the longest acyclic carbon chain in the molecule? Cn1c(SCC(=O)N2CCN(c3cccc[nH+]3)CC2)nnc1-c1ccccc1 ### Response: 2
chain_length
### Instruction: What is the length of the longest acyclic carbon chain in the molecule? COc1ccccc1S(=O)(=O)N1CCC2(CC1)OCCN2S(=O)(=O)c1ccccc1 ### Response: 1
ring_counting
### Instruction: Count the six-membered rings in the following molecule. CCc1ccsc1C(=O)N1C[C@H](C)C[C@H]([NH3+])C1 ### Response: 1
functional_group
### Instruction: Does the molecule contain a carboxyl group? CCn1c(-c2cccc(C)c2)nn(CN2CCN(S(=O)(=O)c3ccccc3)CC2)c1=S ### Response: No
functional_group
### Instruction: Does the molecule contain a carboxyl group? C[C@@H](NC(=O)Cc1ccc(-n2cccc2)cc1)c1ccccc1 ### Response: No
chain_length
### Instruction: What is the length of the longest acyclic carbon chain in the molecule? COc1ccc(-c2nnc(S[C@@H](C)C(=O)Nc3cccc4ccccc34)o2)cc1 ### Response: 3
chain_length
### Instruction: What is the length of the longest acyclic carbon chain in the molecule? COc1ccc(CNC(=O)N[C@@](C)(CO)C2CC2)cc1OC ### Response: 3
chain_length
### Instruction: What is the length of the longest acyclic carbon chain in the molecule? C[C@H](NC(=O)C[S@@](=O)Cc1nc(-c2ccccc2)no1)c1ccccc1 ### Response: 2
chain_length
### Instruction: What is the length of the longest acyclic carbon chain in the molecule? Oc1cccc(-c2nnn[n-]2)c1O ### Response: 0
canonicalization
### Instruction: Canonicalize the following SMILES string. c1(F)cc(F)c(cc1)C(=O)/C=C/c1cc(c(cc1)OCC(=O)[O-])[N+]([O-])=O ### Response: O=C([O-])COc1ccc(/C=C/C(=O)c2ccc(F)cc2F)cc1[N+](=O)[O-]
fragment_assembly
### Instruction: Assemble these two molecular fragments into a single molecule. Fragment 1: [8*]C[C@H](C)[NH3+] Fragment 2: [14*]c1nc(CC)no1 ### Response: CCc1noc(C[C@H](C)[NH3+])n1
chain_length
### Instruction: What is the length of the longest acyclic carbon chain in the molecule? CC(Nc1ccccc1N)=C1C(=O)CC(C)(C)CC1=O ### Response: 2
ring_counting
### Instruction: Count the five-membered rings in the following molecule. CCN(Cc1ccccc1NC(=O)C(=O)N[C@@H]1CCCC[C@@H]1C)C(C)=O ### Response: 0
chain_length
### Instruction: What is the length of the longest acyclic carbon chain in the molecule? [NH3+][C@@H](CCc1ccccc1)c1cscc1Br ### Response: 3
functional_group
### Instruction: Does the molecule contain a aromatic_ring group? C[C@H](NS(=O)(=O)/C=C/c1ccccc1)c1ccc(C(F)(F)F)cc1 ### Response: Yes
functional_group
### Instruction: Does the molecule contain a ketone group? Cc1noc([C@@H]2CCCN(CC#N)C2)n1 ### Response: No
canonicalization
### Instruction: Canonicalize the following SMILES string. C[C@@H](CC)NC(=O)CNC(c1ccc(c(c1)C)C)=O ### Response: CC[C@H](C)NC(=O)CNC(=O)c1ccc(C)c(C)c1
ring_counting
### Instruction: Count the five-membered rings in the following molecule. Cc1c(CCC(=O)NC2CC2)c(=O)n2nc(-c3ccccc3)nc2n1Cc1ccccc1 ### Response: 1
functional_group
### Instruction: Does the molecule contain a sulfonyl group? O=C([O-])CS(=O)(=O)N1CCC1 ### Response: Yes
fragment_assembly
### Instruction: Assemble these two molecular fragments into a single molecule. Fragment 1: [4*]C[C@H]1CCCC[NH+]1[5*] Fragment 2: [5*]N1CCOCC1 ### Response: O=C1[C@H]([NH+]2CCCC[C@@H]2CN2CCOCC2)CCN1C1CC1
functional_group
### Instruction: Does the molecule contain a aromatic_ring group? C#Cc1cccc(NC(=O)N[C@@H]2CCS(=O)(=O)C2)c1 ### Response: Yes
functional_group
### Instruction: Does the molecule contain a nitro group? CC[NH2+]C[C@@]1(c2ccc(C)c(C)c2)CCC[C@H]1C ### Response: No
chain_length
### Instruction: What is the length of the longest acyclic carbon chain in the molecule? CCC(=O)n1nc(SC)c(S(=O)(=O)c2ccccc2)c1N ### Response: 3
functional_group
### Instruction: Does the molecule contain a aldehyde group? O=C(NC1CCCC1)[C@@H](c1ccccc1F)N(Cc1ccccc1Cl)C(=O)c1ccco1 ### Response: No
canonicalization
### Instruction: Canonicalize the following SMILES string. C1CCC[C@@H](NC(C(Nc2cccnc2Cl)=O)=O)[C@@H]1n1nccc1 ### Response: O=C(Nc1cccnc1Cl)C(=O)N[C@@H]1CCCC[C@H]1n1cccn1
ring_counting
### Instruction: Count the six-membered rings in the following molecule. Cc1ccc(CNC(=O)c2nn(C)c3ccccc3c2=O)cc1 ### Response: 3
chain_length
### Instruction: What is the length of the longest acyclic carbon chain in the molecule? COc1ccccc1[C@H](N)c1nc(C(=O)[O-])c[nH]1 ### Response: 1
chain_length
### Instruction: What is the length of the longest acyclic carbon chain in the molecule? C[C@H]1[NH2+]CC[C@H]1C(=O)Nc1ccc(S(N)(=O)=O)cc1 ### Response: 1
ring_counting
### Instruction: Count the six-membered rings in the following molecule. C[C@H]1C(=O)N(c2ccccc2Cl)CCN1C(=O)C1CC1 ### Response: 2
functional_group
### Instruction: Does the molecule contain a ether group? C[NH+]1CCN(CCC(=O)N/N=C\c2cc3c(cc2[N+](=O)[O-])OCO3)CC1 ### Response: Yes
canonicalization
### Instruction: Canonicalize the following SMILES string. c1cccc(c1)CC[C@@](C)(O)C1(C)CC1 ### Response: CC1([C@](C)(O)CCc2ccccc2)CC1
ring_counting
### Instruction: Count the five-membered rings in the following molecule. CC(=O)c1ccc(NC(=O)NC2(C(F)(F)F)Oc3ccccc3O2)cc1 ### Response: 1
ring_counting
### Instruction: Count the five-membered rings in the following molecule. O=C(Cc1ccccc1)Nc1cccc(C(=O)Nc2ccccc2C(=O)[O-])c1 ### Response: 0
ring_counting
### Instruction: Count the five-membered rings in the following molecule. COc1cccc(C(=O)N2CCC3=c4ccccc4=[NH+][C@@H]3[C@H]2c2ccc(Cl)cc2)c1 ### Response: 1
ring_counting
### Instruction: Count the five-membered rings in the following molecule. CC1(C)CC(=O)C2=CN[C@@H]3CCCC[C@H]3N=C2C1 ### Response: 0
functional_group
### Instruction: Does the molecule contain a aldehyde group? O=S(=O)(CCO)[N-]c1cnc(Br)cn1 ### Response: No
functional_group
### Instruction: Does the molecule contain a aromatic_ring group? C/C(=C1/SC(N2CCCC2)=NC1=O)c1ccc(Cl)cc1 ### Response: Yes
fragment_assembly
### Instruction: Assemble these two molecular fragments into a single molecule. Fragment 1: [1*]C(=O)NC Fragment 2: [1*]C(=O)CN[5*] ### Response: CNC(=O)NCC(=O)N(C)C1C2CC3CC(C2)CC1C3
canonicalization
### Instruction: Canonicalize the following SMILES string. c1cc(ccc1CC)[C@H]1Nc2nc(N)nn2[C@H](C1)c1cccc(C)c1 ### Response: CCc1ccc([C@@H]2C[C@H](c3cccc(C)c3)n3nc(N)nc3N2)cc1
canonicalization
### Instruction: Canonicalize the following SMILES string. C(c1cc2c(ccn2CCOC)cc1)(Nc1ccc(OC)nc1)=O ### Response: COCCn1ccc2ccc(C(=O)Nc3ccc(OC)nc3)cc21
chain_length
### Instruction: What is the length of the longest acyclic carbon chain in the molecule? Brc1ccc(N2[C@@H](c3cc[nH+]cc3)NN[C@H]2SCc2nc3ccccc3[nH]2)cc1 ### Response: 1
fragment_assembly
### Instruction: Assemble these two molecular fragments into a single molecule. Fragment 1: [15*][C@H]1CC[NH2+]C1 Fragment 2: [14*]c1nn(C)c2ncccc12 ### Response: Cn1nc([C@H]2CC[NH2+]C2)c2cccnc21
fragment_assembly
### Instruction: Assemble these two molecular fragments into a single molecule. Fragment 1: [1*]C(=O)[C@@]1(C)CCCO1 Fragment 2: [14*]c1noc([14*])n1 ### Response: Cc1ccccc1-c1noc([C@@H](C)NC(=O)[C@@]2(C)CCCO2)n1