task
stringclasses
5 values
input
stringlengths
89
339
chain_length
### Instruction: What is the length of the longest acyclic carbon chain in the molecule? C[C@H](NC(=O)[C@H](Cc1ccccc1)n1cnnn1)c1ccc(Cl)s1 ### Response: 3
functional_group
### Instruction: Does the molecule contain a phenol group? C/C=C(\C)[C@@H]1C=C[C@@H]2C[C@H](C)C[C@H](C)[C@@H]2[C@@H]1C(=O)C1=C([O-])[C@H](C[C@](C)(O)C(=O)[O-])NC1=O ### Response: No
functional_group
### Instruction: Does the molecule contain a sulfonyl group? CN(Cc1ccc(Cl)cc1)c1ccc(S(N)(=O)=O)cn1 ### Response: Yes
functional_group
### Instruction: Does the molecule contain a phenol group? COc1cccc(N2CC[NH+]([C@H]3CCC[C@H]([NH3+])C3)CC2)c1 ### Response: No
functional_group
### Instruction: Does the molecule contain a nitrile group? Cc1ncsc1CNc1ncnc2c1CCCCC2 ### Response: No
functional_group
### Instruction: Does the molecule contain a aromatic_ring group? C[C@H](NC(=O)Nc1ccccc1S(C)(=O)=O)c1cccs1 ### Response: Yes
fragment_assembly
### Instruction: Assemble these two molecular fragments into a single molecule. Fragment 1: [4*]CC(C)(C)C Fragment 2: [5*][NH+]([5*])CC(C)C ### Response: CC(C)C[NH+](CC(N)=O)CC(C)(C)C
canonicalization
### Instruction: Canonicalize the following SMILES string. COc1ccc(cc1)C(=O)C(Nc1ccc(OC)c2ncccc12)=O ### Response: COc1ccc(C(=O)C(=O)Nc2ccc(OC)c3ncccc23)cc1
chain_length
### Instruction: What is the length of the longest acyclic carbon chain in the molecule? Cc1cccc(-n2nc(C(C)(C)C)cc2NC(=O)CCc2cnn(C)c2)c1 ### Response: 3
canonicalization
### Instruction: Canonicalize the following SMILES string. n1c(csc1NC(c1cccc(c1)Cl)=O)-c1c(ccc(c1)OC)OC ### Response: COc1ccc(OC)c(-c2csc(NC(=O)c3cccc(Cl)c3)n2)c1
ring_counting
### Instruction: Count the six-membered rings in the following molecule. CC(=O)Nc1ccc(NC(=O)NCc2cccc(C#N)c2)cc1 ### Response: 2
fragment_assembly
### Instruction: Assemble these two molecular fragments into a single molecule. Fragment 1: [1*]C(=O)CC[8*] Fragment 2: [16*]c1ccc(F)c(F)c1 ### Response: COc1ccc([C@H](O)[C@H](C)NC(=O)CCc2ccc(F)c(F)c2)cc1
fragment_assembly
### Instruction: Assemble these two molecular fragments into a single molecule. Fragment 1: [5*]N(C)C[8*] Fragment 2: [16*]c1ccccc1C ### Response: COC(=O)[C@]1(C)C[C@H](C(=O)N(C)Cc2cc(C)no2)[C@H](c2ccccc2C)N1C
canonicalization
### Instruction: Canonicalize the following SMILES string. Fc1ccc(S(=O)(=O)[C@@H](C(=O)N(c2ccccc2)CC)C)cc1F ### Response: CCN(C(=O)[C@@H](C)S(=O)(=O)c1ccc(F)c(F)c1)c1ccccc1
canonicalization
### Instruction: Canonicalize the following SMILES string. S(CC(N/N=C/c1ccc(Cl)cc1)=O)CC(Nc1ccccc1)=O ### Response: O=C(CSCC(=O)Nc1ccccc1)N/N=C/c1ccc(Cl)cc1
canonicalization
### Instruction: Canonicalize the following SMILES string. C(=O)(c1c(N2CCC(C)CC2)[nH+]ccc1)[O-] ### Response: CC1CCN(c2[nH+]cccc2C(=O)[O-])CC1
ring_counting
### Instruction: Count the five-membered rings in the following molecule. COc1ccc(N2CCN(C(=O)CCOC3CCOCC3)CC2)cc1F ### Response: 0
chain_length
### Instruction: What is the length of the longest acyclic carbon chain in the molecule? CCN(CC)S(=O)(=O)c1ccc(Cl)c(NC(=O)C2CCC2)c1 ### Response: 2
canonicalization
### Instruction: Canonicalize the following SMILES string. n1onc(c1C(Cl)(Cl)Cl)C(Cl)(Cl)Cl ### Response: ClC(Cl)(Cl)c1nonc1C(Cl)(Cl)Cl
functional_group
### Instruction: Does the molecule contain a ether group? C[C@H]1CCC[C@H](CNC(=O)N2CCC(OC[C@@H]3CCCCO3)CC2)C1 ### Response: Yes
fragment_assembly
### Instruction: Assemble these two molecular fragments into a single molecule. Fragment 1: [15*]C1CC1 Fragment 2: [5*]N(C)c1ccccc1 ### Response: CC(C)[C@@H](Sc1nnnn1C1CC1)C(=O)N(C)c1ccccc1
ring_counting
### Instruction: Count the six-membered rings in the following molecule. C[C@@H]1CN(S(=O)(=O)c2ccc(C(=O)NCCc3ccc(F)cc3)cc2)C[C@@H](C)O1 ### Response: 3
fragment_assembly
### Instruction: Assemble these two molecular fragments into a single molecule. Fragment 1: [16*]c1cn(C)nc1CC Fragment 2: [3*]OCC ### Response: CCOc1cc(C)ccc1CNC(=O)Nc1cn(C)nc1CC
ring_counting
### Instruction: Count the five-membered rings in the following molecule. CCc1oc2ccccc2c1CN(C)C(=O)c1n[nH]c(=O)c2ccccc12 ### Response: 1
canonicalization
### Instruction: Canonicalize the following SMILES string. c1cc(sc1Cl)CN1Cc2c(cccc2)[C@H](O)C1 ### Response: O[C@@H]1CN(Cc2ccc(Cl)s2)Cc2ccccc21
chain_length
### Instruction: What is the length of the longest acyclic carbon chain in the molecule? C[C@@H](NC(=O)c1cnc(-c2ccccc2F)s1)c1cccc(C#N)c1 ### Response: 2
functional_group
### Instruction: Does the molecule contain a halide group? Cc1ncsc1C[NH2+]C[C@H]1CC[C@H](C[NH3+])O1 ### Response: No
functional_group
### Instruction: Does the molecule contain a halide group? C[C@H](NC(=O)C1C(C)(C)C1(C)C)c1ccc(Br)cc1 ### Response: Yes
fragment_assembly
### Instruction: Assemble these two molecular fragments into a single molecule. Fragment 1: [1*]C(=O)CC[4*] Fragment 2: [5*]N(C)C ### Response: CN(C)C(=O)CC[NH+]1C[C@@H](O)[C@@H](O)C1
functional_group
### Instruction: Does the molecule contain a ester group? OCCOc1ccc(NCc2ccc(F)cc2F)c(C(F)(F)F)c1 ### Response: No
ring_counting
### Instruction: Count the five-membered rings in the following molecule. CN(C[C@H]1CCC[NH+]1C)C(=O)N1CCCCC[C@@H]1C(=O)[O-] ### Response: 1
canonicalization
### Instruction: Canonicalize the following SMILES string. C(c1cc(C)n(CC)c1C)(=O)NNc1nc(no1)-c1ccncc1 ### Response: CCn1c(C)cc(C(=O)NNc2nc(-c3ccncc3)no2)c1C
ring_counting
### Instruction: Count the six-membered rings in the following molecule. CC(C)n1c(CCNC(=O)c2cc(F)cc3[nH]cnc23)n[nH]c1=S ### Response: 1
fragment_assembly
### Instruction: Assemble these two molecular fragments into a single molecule. Fragment 1: [8*]Cc1ocnc1CO Fragment 2: [8*]C[C@H]1CCCO1 ### Response: OCc1ncoc1C[C@H]1CCCO1
canonicalization
### Instruction: Canonicalize the following SMILES string. C1CCCc2c(C1)cc(s2)C(=O)N[C@@H](C(=O)[O-])C1[C@@H](N=NC=1C)C ### Response: CC1=C([C@@H](NC(=O)c2cc3c(s2)CCCCC3)C(=O)[O-])[C@H](C)N=N1
functional_group
### Instruction: Does the molecule contain a aromatic_ring group? O=S(=O)(CCCF)N1CCC(c2c[nH]c3ncccc23)CC1 ### Response: No
ring_counting
### Instruction: Count the six-membered rings in the following molecule. C[C@H]1OCC[C@H]1C(=O)NCc1noc(C(C)(C)C)n1 ### Response: 0
chain_length
### Instruction: What is the length of the longest acyclic carbon chain in the molecule? CC[C@@H]1CCCCN1C(=O)CCc1nc(-c2ccncc2)no1 ### Response: 3
functional_group
### Instruction: Does the molecule contain a nitro group? Cc1cccnc1[C@H](NC(=O)N[C@H](CO)c1ccc(Cl)cc1)C(C)C ### Response: No
ring_counting
### Instruction: Count the five-membered rings in the following molecule. C[C@@H]1CCCN(C(=O)C(=O)Nc2ccc([S@@](=O)C(F)(F)F)cc2)C1 ### Response: 0
canonicalization
### Instruction: Canonicalize the following SMILES string. c1c(ccc(OCCN2C([C@@](c3c2c(ccc3C)C)(O)CC(C)=O)=O)c1)Cl ### Response: CC(=O)C[C@]1(O)C(=O)N(CCOc2ccc(Cl)cc2)c2c(C)ccc(C)c21
fragment_assembly
### Instruction: Assemble these two molecular fragments into a single molecule. Fragment 1: [9*]n1cnc2c1N=C(O)C[C@H]2c1ccccc1 Fragment 2: [16*]c1cccc(Cl)c1 ### Response: OC1=Nc2c(ncn2-c2cccc(Cl)c2)[C@H](c2ccccc2)C1
chain_length
### Instruction: What is the length of the longest acyclic carbon chain in the molecule? Cc1cc(C)nc(N[C@@H](Cc2ccccc2)C(=O)Nc2cc(C)n(C)n2)n1 ### Response: 3
chain_length
### Instruction: What is the length of the longest acyclic carbon chain in the molecule? COc1ccc2c(ccn2CC(=O)N2CCN(c3ccccc3OC)CC2)c1 ### Response: 2
chain_length
### Instruction: What is the length of the longest acyclic carbon chain in the molecule? CC(C)[C@H](CO)NC(=O)c1coc2ccccc12 ### Response: 4
chain_length
### Instruction: What is the length of the longest acyclic carbon chain in the molecule? CCCC(=O)Nc1cccc(C(=O)Nc2ccc(F)c(Cl)c2)c1 ### Response: 4
fragment_assembly
### Instruction: Assemble these two molecular fragments into a single molecule. Fragment 1: [5*]N1CCN(C)[C@H](CC)C1 Fragment 2: [1*]C(=O)c1ccc(Br)nc1 ### Response: CC[C@@H]1CN(C(=O)c2ccc(Br)nc2)CCN1C
canonicalization
### Instruction: Canonicalize the following SMILES string. c1cc2C(=O)N([C@H](COC)C)C(=O)c2cc1C(Nc1cc(ccc1)C)=O ### Response: COC[C@H](C)N1C(=O)c2ccc(C(=O)Nc3cccc(C)c3)cc2C1=O
canonicalization
### Instruction: Canonicalize the following SMILES string. C(N1CCc2ccc(Br)cc12)CCOC(NC(N)=O)=O ### Response: NC(=O)NC(=O)OCCCN1CCc2ccc(Br)cc21
functional_group
### Instruction: Does the molecule contain a amine group? CC(=O)NNC(=O)c1ccsc1NC(=O)c1ccc([N+](=O)[O-])cc1 ### Response: No
canonicalization
### Instruction: Canonicalize the following SMILES string. c1(cccc(C(F)(F)F)c1)[C@H](CC)C(NCCc1n[nH]c(=O)[nH]1)=O ### Response: CC[C@H](C(=O)NCCc1n[nH]c(=O)[nH]1)c1cccc(C(F)(F)F)c1
ring_counting
### Instruction: Count the six-membered rings in the following molecule. Cc1ccc(-c2nc(C(=O)NNC(=S)NC3CCCCC3)cs2)cc1 ### Response: 2
chain_length
### Instruction: What is the length of the longest acyclic carbon chain in the molecule? c1ccc(COCCc2ncnc3sccc23)cc1 ### Response: 2
functional_group
### Instruction: Does the molecule contain a ether group? CCOC(=O)N1CCN(C(=O)[C@@H]2CC23CCN(C(=O)c2ccc(-n4ccnc4)cc2)CC3)CC1 ### Response: Yes
ring_counting
### Instruction: Count the six-membered rings in the following molecule. CCN(Cc1ccccc1C)S(=O)(=O)c1cccc(S(=O)(=O)NC)c1 ### Response: 2
ring_counting
### Instruction: Count the six-membered rings in the following molecule. Clc1ccc(-c2nnn(Cc3cccnc3)n2)cc1 ### Response: 2
canonicalization
### Instruction: Canonicalize the following SMILES string. c12c(OCCO1)cc(c(c2)CN1/C(SCC1=O)=C\C(C(C)(C)C)=O)Br ### Response: CC(C)(C)C(=O)/C=C1/SCC(=O)N1Cc1cc2c(cc1Br)OCCO2
canonicalization
### Instruction: Canonicalize the following SMILES string. C1CC[C@@H](N2C(=[NH2+])[C@@H](C[C@H](c3ccccc3)C)[NH+]=C21)C ### Response: C[C@H](C[C@H]1[NH+]=C2CCC[C@H](C)N2C1=[NH2+])c1ccccc1
fragment_assembly
### Instruction: Assemble these two molecular fragments into a single molecule. Fragment 1: [5*][N-]c1cccc(Cl)c1 Fragment 2: [16*]c1cccc(Cl)c1 ### Response: Cc1nnc(-c2ccc(S(=O)(=O)[N-]c3cccc(Cl)c3)s2)o1
ring_counting
### Instruction: Count the six-membered rings in the following molecule. Cc1ccncc1NC(=O)N[C@@H]1CCC[C@H](S(C)(=O)=O)C1 ### Response: 2
functional_group
### Instruction: Does the molecule contain a aromatic_ring group? CC(C)(C)[C@H]([NH2+]CC(=O)Nc1cc(F)ccc1F)C(N)=O ### Response: Yes
canonicalization
### Instruction: Canonicalize the following SMILES string. C(=O)(N(C)C[C@H](C(=O)OC)C)N[C@@H](C)c1c(F)cccc1Cl ### Response: COC(=O)[C@H](C)CN(C)C(=O)N[C@@H](C)c1c(F)cccc1Cl
chain_length
### Instruction: What is the length of the longest acyclic carbon chain in the molecule? Cc1cc(NC(=O)CN2CCN(c3ccc(C(F)(F)F)cc3[N+](=O)[O-])CC2)no1 ### Response: 2
ring_counting
### Instruction: Count the five-membered rings in the following molecule. Cc1ccccc1C(=O)NC(=S)Nc1ccc2oc(-c3ccc(F)cc3)nc2c1 ### Response: 1
fragment_assembly
### Instruction: Assemble these two molecular fragments into a single molecule. Fragment 1: [16*]c1cc(F)ccc1OC Fragment 2: [16*]c1cc([16*])cc(OC)c1 ### Response: COc1cc(C(=O)[O-])cc(-c2cc(F)ccc2OC)c1
canonicalization
### Instruction: Canonicalize the following SMILES string. C1[NH+]([C@H]2CN(C[C@@H]1CC2)C(=O)C1CCC1)CC(=O)NCCc1ccccc1 ### Response: O=C(C[NH+]1C[C@H]2CC[C@@H]1CN(C(=O)C1CCC1)C2)NCCc1ccccc1
functional_group
### Instruction: Does the molecule contain a halide group? C[C@@H]([NH2+]CCC(=O)NC1CC1)c1ccc(F)cc1Cl ### Response: Yes
functional_group
### Instruction: Does the molecule contain a amide group? C[C@H](NC(=O)C[NH+]1CCCC1)c1ccccc1Cl ### Response: Yes
canonicalization
### Instruction: Canonicalize the following SMILES string. c1(N)ccc(C(F)(F)F)c(n1)Cl ### Response: Nc1ccc(C(F)(F)F)c(Cl)n1
chain_length
### Instruction: What is the length of the longest acyclic carbon chain in the molecule? Cc1ccc(F)cc1S(=O)(=O)N1CCC[C@@H](C2OCCO2)C1 ### Response: 1
canonicalization
### Instruction: Canonicalize the following SMILES string. C[C@H](CNCCC[NH3+])Br ### Response: C[C@@H](Br)CNCCC[NH3+]
fragment_assembly
### Instruction: Assemble these two molecular fragments into a single molecule. Fragment 1: [1*]C(=O)C[4*] Fragment 2: [8*]C(F)(F)F ### Response: Cc1cccnc1CNC(=O)CN(C)c1ccc(C(F)(F)F)cc1C=O
fragment_assembly
### Instruction: Assemble these two molecular fragments into a single molecule. Fragment 1: [8*]Cc1ccccc1 Fragment 2: [16*]c1ccccc1 ### Response: NC(=O)CSc1nnc(-c2cccnc2)n1Cc1ccccc1
ring_counting
### Instruction: Count the six-membered rings in the following molecule. O=C(Cc1cn2ccccc2n1)NCc1ccccc1Cn1ccnc1 ### Response: 2
chain_length
### Instruction: What is the length of the longest acyclic carbon chain in the molecule? CCOc1ncccc1CNC(=O)NCCc1nnc2n1CCC2 ### Response: 2
fragment_assembly
### Instruction: Assemble these two molecular fragments into a single molecule. Fragment 1: [16*]c1cc(Cl)c(C)cc1O Fragment 2: [8*]CCCC ### Response: CCCCN1C(=O)c2[nH]nc(-c3cc(Cl)c(C)cc3O)c2[C@H]1c1cccc(O)c1
ring_counting
### Instruction: Count the six-membered rings in the following molecule. COc1cccc(N2C[C@H](C(=O)Nc3nc4c(s3)COCC4)CC2=O)c1 ### Response: 2
ring_counting
### Instruction: Count the six-membered rings in the following molecule. N#Cc1cccc(NNC(=O)N[C@H](c2nccs2)C2CC2)c1 ### Response: 1
ring_counting
### Instruction: Count the six-membered rings in the following molecule. O=C(Nc1ccccc1N1CCCCC1)[C@@H]1CC(c2ccc(Cl)s2)=NO1 ### Response: 2
ring_counting
### Instruction: Count the five-membered rings in the following molecule. O=C(CCN1C(=O)[C@@H]2[C@@H](C1=O)[C@H]1C=C[C@@H]2C1)Nc1ccccc1F ### Response: 3
chain_length
### Instruction: What is the length of the longest acyclic carbon chain in the molecule? NC(=O)c1c(NC(=O)COC(=O)c2ccc(Br)cc2)sc2c1CCCC2 ### Response: 2
ring_counting
### Instruction: Count the six-membered rings in the following molecule. COc1ccc(NC(=O)[C@H]2CCCN(S(=O)(=O)c3c[nH]cn3)C2)cc1 ### Response: 2
functional_group
### Instruction: Does the molecule contain a nitro group? N#CC1=C(N)Oc2cc3c(cc2[C@H]1c1ccccc1OCc1ccccc1)OCO3 ### Response: No
ring_counting
### Instruction: Count the five-membered rings in the following molecule. Cc1noc([C@H](C)NC(=O)[C@@H]2CCCc3ccccc32)n1 ### Response: 1
functional_group
### Instruction: Does the molecule contain a phenol group? Cc1ccc(CN2CC(=O)C(c3n(C)c4ccccc4[n+]3C)=C2N)s1 ### Response: No
canonicalization
### Instruction: Canonicalize the following SMILES string. N(c1ccc(cc1)C)(C(=O)c1ccco1)Cc1cc2c([nH]c1=O)cc(C)cc2 ### Response: Cc1ccc(N(Cc2cc3ccc(C)cc3[nH]c2=O)C(=O)c2ccco2)cc1
canonicalization
### Instruction: Canonicalize the following SMILES string. C(C[NH+](C)C)(C)([C@@H](NC(=O)N[C@H]1C(=O)N(CC1)C)C)C ### Response: C[C@H](NC(=O)N[C@@H]1CCN(C)C1=O)C(C)(C)C[NH+](C)C
ring_counting
### Instruction: Count the six-membered rings in the following molecule. C[C@H](Cc1cccs1)N(C)C(=O)[C@@H]1CCC(=O)N1 ### Response: 0
functional_group
### Instruction: Does the molecule contain a aromatic_ring group? CCc1ccsc1C[NH2+]Cc1ccccc1N1CCOCC1 ### Response: Yes
functional_group
### Instruction: Does the molecule contain a halide group? C[P@@](=O)(Nc1ccccc1Cl)Oc1cccc(Cl)c1Cl ### Response: Yes
chain_length
### Instruction: What is the length of the longest acyclic carbon chain in the molecule? Cc1ccc2ncc(CN3CCN(Cc4ccc(Cl)nc4)CC3)n2c1 ### Response: 1
fragment_assembly
### Instruction: Assemble these two molecular fragments into a single molecule. Fragment 1: [5*]N[C@H]1CC[C@H]([15*])C1 Fragment 2: [4*][C@H]([8*])c1nccs1 ### Response: C[NH+](C)[C@H]1CC[C@H](NC(=O)N[C@@H](c2nccs2)C2CC2)C1
fragment_assembly
### Instruction: Assemble these two molecular fragments into a single molecule. Fragment 1: [1*]C(=O)C[4*] Fragment 2: [5*]Nc1c(C)nn(C)c1C ### Response: CC[NH+]1CC[C@H](N(C)CC(=O)Nc2c(C)nn(C)c2C)[C@H](C)C1
ring_counting
### Instruction: Count the five-membered rings in the following molecule. COc1ccc([C@@H]2CC(=O)C3=C(C2)N[C@@H]2N=NC(O)=C2[C@H]3c2ccc(Cl)c(Cl)c2)cc1OC ### Response: 1
functional_group
### Instruction: Does the molecule contain a ester group? COc1cc(C[NH+]2CCC[C@]3(CCC(=O)N(C4CC4)C3)C2)cc(OC)c1 ### Response: No
canonicalization
### Instruction: Canonicalize the following SMILES string. C1N(c2nc(cnc2)C(=O)OC)C[C@@](C([O-])=O)(C1)CCC ### Response: CCC[C@]1(C(=O)[O-])CCN(c2cncc(C(=O)OC)n2)C1
chain_length
### Instruction: What is the length of the longest acyclic carbon chain in the molecule? COC(=O)c1cccc(CCNC(=O)Nc2ncnn2C)c1 ### Response: 2
ring_counting
### Instruction: Count the six-membered rings in the following molecule. Cc1cc(C)c2c(n1)oc1c(N3CC[NH+](CC(N)=O)CC3)ncnc12 ### Response: 3
ring_counting
### Instruction: Count the five-membered rings in the following molecule. CCc1cnc(C[NH+](C)Cc2c(CC)nn(C)c2CC)s1 ### Response: 2
ring_counting
### Instruction: Count the six-membered rings in the following molecule. CC(C)OC(=O)[C@H](C)CNC(=O)N1C[C@H](C)O[C@@H](c2ccccc2)C1 ### Response: 2