| # List of metagenomics datasets for GenomeOcean(v1.0-1.2) |
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| 1. NEON 178G, Terrestrial soil microbial communities from various NEON sites located in USA and Puerto Rico |
| 2. Lake Mendota, 102G, Freshwater microbial communities from Lake Mendota, Crystal Bog Lake, and Trout Bog Lake in Wisconsin, United States - time-series metagenomes. IMG Submission ID: 288555, doi:10.46936/10.25585/60001198. |
| 3. Oilcane rhizoshphere soil, 92G, Sugarcane leaf and rhizosphere microbial communities from a greenhouse and field in University of Florida, Reddick, FL, USA |
| 4. GRE, 72G, Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico. IMG Submission ID: 255440, doi: 10.46936/10.25585/60000880. |
| 5. Harvard Forest 71G, Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States. IMG Submission ID: 264502, doi: 10.46936/fics.proj.2016.49483/60006003. |
| 6. Tara ocean, 128G, the total of ~35,000 biological samples and ~13,000 contextual measures from three depths constitutes the largest modern-day worldwide collection of plankton sampled 'end to end' around the world |
| 7. Antartic, 14G, A combination of the JGI-CSP data and Illumina sequencing of enriched culture from two Antarctic Lakes: Lake Fryxell and Bonny |
| 8. HMPv2.0, 52G, all human microbiome project data assembled |
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| genomeocean: a pretrained microbial genome foundational model (genomeoceanLLM) |
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