query stringlengths 52 186 | positive listlengths 1 10 | negative listlengths 1 10 | system stringlengths 49 1.02k |
|---|---|---|---|
What is the biomedical concept corresponding to 'sds'? | [
"4-4'sds"
] | [
"sdds",
"dhssp",
"dsgss",
"dasdss",
"sdtsb",
"dsahs",
"dsspd",
"ts-hds",
"sdval",
"hddsm"
] | Given the context 'The monomer was subjected to SDS-PAGE with 12% acrylamide, while the dimer and octamer were subjected to NATIVE-PAGE with 7.5% acrylamide.', answer the user's query. |
What is the biomedical concept corresponding to 'acrylamide'? | [
"acrylamide"
] | [
"acrylamides",
"diacetone acrylamide",
"n-(2-aminoethyl)acrylamide",
"methacrylamide",
"n-(hydroxymethyl)acrylamide",
"alpha-aminoacrylate",
"n-methylacrylamide",
"n-methanolacrylamide",
"duracryl liquid acrylamide",
"2-aminoethylmethacrylate"
] | Given the context 'The monomer was subjected to SDS-PAGE with 12% acrylamide, while the dimer and octamer were subjected to NATIVE-PAGE with 7.5% acrylamide.', answer the user's query. |
What is the biomedical concept corresponding to 'acrylamide'? | [
"acrylamide"
] | [
"acrylamides",
"diacetone acrylamide",
"n-(2-aminoethyl)acrylamide",
"methacrylamide",
"n-(hydroxymethyl)acrylamide",
"alpha-aminoacrylate",
"n-methylacrylamide",
"n-methanolacrylamide",
"duracryl liquid acrylamide",
"2-aminoethylmethacrylate"
] | Given the context 'The monomer was subjected to SDS-PAGE with 12% acrylamide, while the dimer and octamer were subjected to NATIVE-PAGE with 7.5% acrylamide.', answer the user's query. |
What is the biomedical concept corresponding to 'cys'? | [
"cysteine",
"l cysteine",
"l-cysteine"
] | [
"cys-cys",
"cysteinylcysteine",
"cystine",
"l-cystine",
"aa-cysteine",
"cysteamine",
"thiocysteine, (l)-isomer",
"cysteinamine",
"cystathionine",
"thiocysteine"
] | Given the context 'Determination of the oligomeric state of TYMS by mutated Cys.', answer the user's query. |
What is the biomedical concept corresponding to 'cys'? | [
"cysteine",
"l cysteine",
"l-cysteine"
] | [
"cys-cys",
"cysteinylcysteine",
"cystine",
"l-cystine",
"aa-cysteine",
"cysteamine",
"thiocysteine, (l)-isomer",
"cysteinamine",
"cystathionine",
"thiocysteine"
] | Given the context '(A) Available TYMS structures with Cys43, Cys180, and Cys210 sites depicted as red.', answer the user's query. |
What is the biomedical concept corresponding to 'cys'? | [
"cysteine",
"l cysteine",
"l-cysteine"
] | [
"cys-cys",
"cysteinylcysteine",
"cystine",
"l-cystine",
"aa-cysteine",
"cysteamine",
"thiocysteine, (l)-isomer",
"cysteinamine",
"cystathionine",
"thiocysteine"
] | Given the context '(A) Available TYMS structures with Cys43, Cys180, and Cys210 sites depicted as red.', answer the user's query. |
What is the biomedical concept corresponding to 'cys'? | [
"cysteine",
"l cysteine",
"l-cysteine"
] | [
"cys-cys",
"cysteinylcysteine",
"cystine",
"l-cystine",
"aa-cysteine",
"cysteamine",
"thiocysteine, (l)-isomer",
"cysteinamine",
"cystathionine",
"thiocysteine"
] | Given the context '(A) Available TYMS structures with Cys43, Cys180, and Cys210 sites depicted as red.', answer the user's query. |
What is the biomedical concept corresponding to 'coomassie brilliant blue'? | [
"coomassie brilliant blue",
"coomassie blue g",
"coomassie brilliant blue g 250",
"coomassie brilliant blue g250",
"brilliant blue g",
"serva blue g"
] | [
"coomassie blue",
"coomassie brilliant blue r",
"coomassie blue r 250",
"brilliant cresyl blue",
"brilliant blue",
"brilliant blue, disodium salt",
"brilliant blue fcf",
"affi gel blue",
"brilliant blue diammonium salt",
"brilliant blue al (3:1) salt"
] | Given the context 'The data were derived from PDB (Protein Data Bank) and the ID is 1YPV; (B,C) Western blot and Coomassie brilliant blue of TYMS with Cys43Gly, Cys180Gly, or Cys210Gly (without β-mercaptoethanol); (D) size exclusion chromatography of TYMS with Cys43Gly, Cys180Gly, or Cys210Gly.', answer the user's quer... |
What is the biomedical concept corresponding to 'cys'? | [
"cysteine",
"l cysteine",
"l-cysteine"
] | [
"cys-cys",
"cysteinylcysteine",
"cystine",
"l-cystine",
"aa-cysteine",
"cysteamine",
"thiocysteine, (l)-isomer",
"cysteinamine",
"cystathionine",
"thiocysteine"
] | Given the context 'The data were derived from PDB (Protein Data Bank) and the ID is 1YPV; (B,C) Western blot and Coomassie brilliant blue of TYMS with Cys43Gly, Cys180Gly, or Cys210Gly (without β-mercaptoethanol); (D) size exclusion chromatography of TYMS with Cys43Gly, Cys180Gly, or Cys210Gly.', answer the user's quer... |
What is the biomedical concept corresponding to 'gly'? | [
"glycine"
] | [
"glyglyleu",
"glycyl glycine",
"glycine, n-glycyl-",
"glycyl-glycine",
"glycylglycine",
"n-glycylglycine",
"glyser",
"n glycylglycine",
"glycine enol",
"gly-ala"
] | Given the context 'The data were derived from PDB (Protein Data Bank) and the ID is 1YPV; (B,C) Western blot and Coomassie brilliant blue of TYMS with Cys43Gly, Cys180Gly, or Cys210Gly (without β-mercaptoethanol); (D) size exclusion chromatography of TYMS with Cys43Gly, Cys180Gly, or Cys210Gly.', answer the user's quer... |
What is the biomedical concept corresponding to 'cys'? | [
"cysteine",
"l cysteine",
"l-cysteine"
] | [
"cys-cys",
"cysteinylcysteine",
"cystine",
"l-cystine",
"aa-cysteine",
"cysteamine",
"thiocysteine, (l)-isomer",
"cysteinamine",
"cystathionine",
"thiocysteine"
] | Given the context 'The data were derived from PDB (Protein Data Bank) and the ID is 1YPV; (B,C) Western blot and Coomassie brilliant blue of TYMS with Cys43Gly, Cys180Gly, or Cys210Gly (without β-mercaptoethanol); (D) size exclusion chromatography of TYMS with Cys43Gly, Cys180Gly, or Cys210Gly.', answer the user's quer... |
What is the biomedical concept corresponding to 'gly'? | [
"glycine"
] | [
"glyglyleu",
"glycyl glycine",
"glycine, n-glycyl-",
"glycyl-glycine",
"glycylglycine",
"n-glycylglycine",
"glyser",
"n glycylglycine",
"glycine enol",
"gly-ala"
] | Given the context 'The data were derived from PDB (Protein Data Bank) and the ID is 1YPV; (B,C) Western blot and Coomassie brilliant blue of TYMS with Cys43Gly, Cys180Gly, or Cys210Gly (without β-mercaptoethanol); (D) size exclusion chromatography of TYMS with Cys43Gly, Cys180Gly, or Cys210Gly.', answer the user's quer... |
What is the biomedical concept corresponding to 'cys'? | [
"cysteine",
"l cysteine",
"l-cysteine"
] | [
"cys-cys",
"cysteinylcysteine",
"cystine",
"l-cystine",
"aa-cysteine",
"cysteamine",
"thiocysteine, (l)-isomer",
"cysteinamine",
"cystathionine",
"thiocysteine"
] | Given the context 'The data were derived from PDB (Protein Data Bank) and the ID is 1YPV; (B,C) Western blot and Coomassie brilliant blue of TYMS with Cys43Gly, Cys180Gly, or Cys210Gly (without β-mercaptoethanol); (D) size exclusion chromatography of TYMS with Cys43Gly, Cys180Gly, or Cys210Gly.', answer the user's quer... |
What is the biomedical concept corresponding to 'gly'? | [
"glycine"
] | [
"glyglyleu",
"glycyl glycine",
"glycine, n-glycyl-",
"glycyl-glycine",
"glycylglycine",
"n-glycylglycine",
"glyser",
"n glycylglycine",
"glycine enol",
"gly-ala"
] | Given the context 'The data were derived from PDB (Protein Data Bank) and the ID is 1YPV; (B,C) Western blot and Coomassie brilliant blue of TYMS with Cys43Gly, Cys180Gly, or Cys210Gly (without β-mercaptoethanol); (D) size exclusion chromatography of TYMS with Cys43Gly, Cys180Gly, or Cys210Gly.', answer the user's quer... |
What is the biomedical concept corresponding to 'β-mercaptoethanol'? | [
"2-mercaptoethanol",
"2 mercaptoethanol",
"mercaptoethanol",
"2-me (mercaptoethanol)"
] | [
"2-mercaptoethanol disulfide",
"sl-mercaptoethanol",
"beta-mercaptoethylamine",
"beta mercaptoethylamine",
"2-methylpropane-2-thiol",
"n,n-dimethyl-2-mercaptoethylamine",
"betathine",
"beta,beta dimethylcysteine",
"ethanethiol, 2-amino-",
"beta,beta-dimethylcysteine"
] | Given the context 'The data were derived from PDB (Protein Data Bank) and the ID is 1YPV; (B,C) Western blot and Coomassie brilliant blue of TYMS with Cys43Gly, Cys180Gly, or Cys210Gly (without β-mercaptoethanol); (D) size exclusion chromatography of TYMS with Cys43Gly, Cys180Gly, or Cys210Gly.', answer the user's quer... |
What is the biomedical concept corresponding to 'cys'? | [
"cysteine",
"l cysteine",
"l-cysteine"
] | [
"cys-cys",
"cysteinylcysteine",
"cystine",
"l-cystine",
"aa-cysteine",
"cysteamine",
"thiocysteine, (l)-isomer",
"cysteinamine",
"cystathionine",
"thiocysteine"
] | Given the context 'The data were derived from PDB (Protein Data Bank) and the ID is 1YPV; (B,C) Western blot and Coomassie brilliant blue of TYMS with Cys43Gly, Cys180Gly, or Cys210Gly (without β-mercaptoethanol); (D) size exclusion chromatography of TYMS with Cys43Gly, Cys180Gly, or Cys210Gly.', answer the user's quer... |
What is the biomedical concept corresponding to 'gly'? | [
"glycine"
] | [
"glyglyleu",
"glycyl glycine",
"glycine, n-glycyl-",
"glycyl-glycine",
"glycylglycine",
"n-glycylglycine",
"glyser",
"n glycylglycine",
"glycine enol",
"gly-ala"
] | Given the context 'The data were derived from PDB (Protein Data Bank) and the ID is 1YPV; (B,C) Western blot and Coomassie brilliant blue of TYMS with Cys43Gly, Cys180Gly, or Cys210Gly (without β-mercaptoethanol); (D) size exclusion chromatography of TYMS with Cys43Gly, Cys180Gly, or Cys210Gly.', answer the user's quer... |
What is the biomedical concept corresponding to 'cys'? | [
"cysteine",
"l cysteine",
"l-cysteine"
] | [
"cys-cys",
"cysteinylcysteine",
"cystine",
"l-cystine",
"aa-cysteine",
"cysteamine",
"thiocysteine, (l)-isomer",
"cysteinamine",
"cystathionine",
"thiocysteine"
] | Given the context 'The data were derived from PDB (Protein Data Bank) and the ID is 1YPV; (B,C) Western blot and Coomassie brilliant blue of TYMS with Cys43Gly, Cys180Gly, or Cys210Gly (without β-mercaptoethanol); (D) size exclusion chromatography of TYMS with Cys43Gly, Cys180Gly, or Cys210Gly.', answer the user's quer... |
What is the biomedical concept corresponding to 'gly'? | [
"glycine"
] | [
"glyglyleu",
"glycyl glycine",
"glycine, n-glycyl-",
"glycyl-glycine",
"glycylglycine",
"n-glycylglycine",
"glyser",
"n glycylglycine",
"glycine enol",
"gly-ala"
] | Given the context 'The data were derived from PDB (Protein Data Bank) and the ID is 1YPV; (B,C) Western blot and Coomassie brilliant blue of TYMS with Cys43Gly, Cys180Gly, or Cys210Gly (without β-mercaptoethanol); (D) size exclusion chromatography of TYMS with Cys43Gly, Cys180Gly, or Cys210Gly.', answer the user's quer... |
What is the biomedical concept corresponding to 'cys'? | [
"cysteine",
"l cysteine",
"l-cysteine"
] | [
"cys-cys",
"cysteinylcysteine",
"cystine",
"l-cystine",
"aa-cysteine",
"cysteamine",
"thiocysteine, (l)-isomer",
"cysteinamine",
"cystathionine",
"thiocysteine"
] | Given the context 'The data were derived from PDB (Protein Data Bank) and the ID is 1YPV; (B,C) Western blot and Coomassie brilliant blue of TYMS with Cys43Gly, Cys180Gly, or Cys210Gly (without β-mercaptoethanol); (D) size exclusion chromatography of TYMS with Cys43Gly, Cys180Gly, or Cys210Gly.', answer the user's quer... |
What is the biomedical concept corresponding to 'gly'? | [
"glycine"
] | [
"glyglyleu",
"glycyl glycine",
"glycine, n-glycyl-",
"glycyl-glycine",
"glycylglycine",
"n-glycylglycine",
"glyser",
"n glycylglycine",
"glycine enol",
"gly-ala"
] | Given the context 'The data were derived from PDB (Protein Data Bank) and the ID is 1YPV; (B,C) Western blot and Coomassie brilliant blue of TYMS with Cys43Gly, Cys180Gly, or Cys210Gly (without β-mercaptoethanol); (D) size exclusion chromatography of TYMS with Cys43Gly, Cys180Gly, or Cys210Gly.', answer the user's quer... |
What is the biomedical concept corresponding to 'dump'? | [
"dump (2'-deoxyuridylic acid)",
"2'-deoxyuridine-5'-monophosphate",
"2'-deoxyuridine 5'-phosphate",
"2'-deoxyuridylic acid"
] | [
"dumsin",
"tetrahydro-dump",
"deoxyuridine triphosphate",
"2',3'-dideoxyuridine 5'-monophosphate",
"tetrahydro-2'-deoxyuridine-5'-monophosphate",
"dumpda",
"2'-deoxyuridine 5'-triphosphate",
"2'-deoxyuridine 5'-(alpha,beta-imido)triphosphate",
"2'-deoxyuridine 5'-imidotriphosphate",
"2'-deoxythymi... | Given the context '(A) Reaction process curves of dUMP for TYMS monomer, the left panel showing the substrate saturation curve, and the right panel showing the Lineweaver–Burk double-reciprocal plot; (B) reaction process curves of dUMP for TYMS dimer; (C) reaction process curves of dUMP for TYMS octamer; (D) reaction p... |
What is the biomedical concept corresponding to 'dump'? | [
"dump (2'-deoxyuridylic acid)",
"2'-deoxyuridine-5'-monophosphate",
"2'-deoxyuridine 5'-phosphate",
"2'-deoxyuridylic acid"
] | [
"dumsin",
"tetrahydro-dump",
"deoxyuridine triphosphate",
"2',3'-dideoxyuridine 5'-monophosphate",
"tetrahydro-2'-deoxyuridine-5'-monophosphate",
"dumpda",
"2'-deoxyuridine 5'-triphosphate",
"2'-deoxyuridine 5'-(alpha,beta-imido)triphosphate",
"2'-deoxyuridine 5'-imidotriphosphate",
"2'-deoxythymi... | Given the context '(A) Reaction process curves of dUMP for TYMS monomer, the left panel showing the substrate saturation curve, and the right panel showing the Lineweaver–Burk double-reciprocal plot; (B) reaction process curves of dUMP for TYMS dimer; (C) reaction process curves of dUMP for TYMS octamer; (D) reaction p... |
What is the biomedical concept corresponding to 'dump'? | [
"dump (2'-deoxyuridylic acid)",
"2'-deoxyuridine-5'-monophosphate",
"2'-deoxyuridine 5'-phosphate",
"2'-deoxyuridylic acid"
] | [
"dumsin",
"tetrahydro-dump",
"deoxyuridine triphosphate",
"2',3'-dideoxyuridine 5'-monophosphate",
"tetrahydro-2'-deoxyuridine-5'-monophosphate",
"dumpda",
"2'-deoxyuridine 5'-triphosphate",
"2'-deoxyuridine 5'-(alpha,beta-imido)triphosphate",
"2'-deoxyuridine 5'-imidotriphosphate",
"2'-deoxythymi... | Given the context '(A) Reaction process curves of dUMP for TYMS monomer, the left panel showing the substrate saturation curve, and the right panel showing the Lineweaver–Burk double-reciprocal plot; (B) reaction process curves of dUMP for TYMS dimer; (C) reaction process curves of dUMP for TYMS octamer; (D) reaction p... |
What is the biomedical concept corresponding to 'mthf'? | [
"tetrahydromethylenefolate",
"5,10-methylene-5,6,7,8-tetrahydrofolate",
"5,10-methylenetetrahydrofolate",
"5,10-methylenetetrahydrofolic acid",
"5,10-methylenetetrahydrofolate, (d-glu)-isomer",
"5,10-methylenetetrahydrofolate, (l-glu)-(s)-isomer"
] | [
"mthf (5,11-methenyltetrahydrohomofolate)",
"5,11-mthf",
"n(5)-methyltetrahydrofolic acid",
"5-methyltetrahydrofolate",
"n5,n10-methenyl tetrahydrofolate",
"3-mthf",
"methanopterin, carboxytetrahydro-",
"5-methyltetrahydrofolate, (l-glu)-(r)-isomer",
"5-methyltetrahydrofolate, (dl-glu)-isomer",
"n... | Given the context '(A) Reaction process curves of dUMP for TYMS monomer, the left panel showing the substrate saturation curve, and the right panel showing the Lineweaver–Burk double-reciprocal plot; (B) reaction process curves of dUMP for TYMS dimer; (C) reaction process curves of dUMP for TYMS octamer; (D) reaction p... |
What is the biomedical concept corresponding to 'mthf'? | [
"tetrahydromethylenefolate",
"5,10-methylene-5,6,7,8-tetrahydrofolate",
"5,10-methylenetetrahydrofolate",
"5,10-methylenetetrahydrofolic acid",
"5,10-methylenetetrahydrofolate, (d-glu)-isomer",
"5,10-methylenetetrahydrofolate, (l-glu)-(s)-isomer"
] | [
"mthf (5,11-methenyltetrahydrohomofolate)",
"5,11-mthf",
"n(5)-methyltetrahydrofolic acid",
"5-methyltetrahydrofolate",
"n5,n10-methenyl tetrahydrofolate",
"3-mthf",
"methanopterin, carboxytetrahydro-",
"5-methyltetrahydrofolate, (l-glu)-(r)-isomer",
"5-methyltetrahydrofolate, (dl-glu)-isomer",
"n... | Given the context '(A) Reaction process curves of dUMP for TYMS monomer, the left panel showing the substrate saturation curve, and the right panel showing the Lineweaver–Burk double-reciprocal plot; (B) reaction process curves of dUMP for TYMS dimer; (C) reaction process curves of dUMP for TYMS octamer; (D) reaction p... |
What is the biomedical concept corresponding to 'mthf'? | [
"tetrahydromethylenefolate",
"5,10-methylene-5,6,7,8-tetrahydrofolate",
"5,10-methylenetetrahydrofolate",
"5,10-methylenetetrahydrofolic acid",
"5,10-methylenetetrahydrofolate, (d-glu)-isomer",
"5,10-methylenetetrahydrofolate, (l-glu)-(s)-isomer"
] | [
"mthf (5,11-methenyltetrahydrohomofolate)",
"5,11-mthf",
"n(5)-methyltetrahydrofolic acid",
"5-methyltetrahydrofolate",
"n5,n10-methenyl tetrahydrofolate",
"3-mthf",
"methanopterin, carboxytetrahydro-",
"5-methyltetrahydrofolate, (l-glu)-(r)-isomer",
"5-methyltetrahydrofolate, (dl-glu)-isomer",
"n... | Given the context '(A) Reaction process curves of dUMP for TYMS monomer, the left panel showing the substrate saturation curve, and the right panel showing the Lineweaver–Burk double-reciprocal plot; (B) reaction process curves of dUMP for TYMS dimer; (C) reaction process curves of dUMP for TYMS octamer; (D) reaction p... |
What is the biomedical concept corresponding to 'dump'? | [
"dump (2'-deoxyuridylic acid)",
"2'-deoxyuridine-5'-monophosphate",
"2'-deoxyuridine 5'-phosphate",
"2'-deoxyuridylic acid"
] | [
"dumsin",
"tetrahydro-dump",
"deoxyuridine triphosphate",
"2',3'-dideoxyuridine 5'-monophosphate",
"tetrahydro-2'-deoxyuridine-5'-monophosphate",
"dumpda",
"2'-deoxyuridine 5'-triphosphate",
"2'-deoxyuridine 5'-(alpha,beta-imido)triphosphate",
"2'-deoxyuridine 5'-imidotriphosphate",
"2'-deoxythymi... | Given the context '(A) Reaction process curves of dUMP for TYMS monomer, the left panel showing the substrate saturation curve, and the right panel showing the Lineweaver–Burk double-reciprocal plot; (B) reaction process curves of dUMP for TYMS dimer; (C) reaction process curves of dUMP for TYMS octamer; (D) reaction p... |
What is the biomedical concept corresponding to 'mthf'? | [
"tetrahydromethylenefolate",
"5,10-methylene-5,6,7,8-tetrahydrofolate",
"5,10-methylenetetrahydrofolate",
"5,10-methylenetetrahydrofolic acid",
"5,10-methylenetetrahydrofolate, (d-glu)-isomer",
"5,10-methylenetetrahydrofolate, (l-glu)-(s)-isomer"
] | [
"mthf (5,11-methenyltetrahydrohomofolate)",
"5,11-mthf",
"n(5)-methyltetrahydrofolic acid",
"5-methyltetrahydrofolate",
"n5,n10-methenyl tetrahydrofolate",
"3-mthf",
"methanopterin, carboxytetrahydro-",
"5-methyltetrahydrofolate, (l-glu)-(r)-isomer",
"5-methyltetrahydrofolate, (dl-glu)-isomer",
"n... | Given the context '(A) Reaction process curves of dUMP for TYMS monomer, the left panel showing the substrate saturation curve, and the right panel showing the Lineweaver–Burk double-reciprocal plot; (B) reaction process curves of dUMP for TYMS dimer; (C) reaction process curves of dUMP for TYMS octamer; (D) reaction p... |
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